Query 018240
Match_columns 359
No_of_seqs 192 out of 2114
Neff 11.0
Searched_HMMs 46136
Date Fri Mar 29 07:19:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018240.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018240hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1368 Threonine aldolase [Am 100.0 9.8E-52 2.1E-56 326.3 28.5 345 3-349 21-365 (384)
2 COG2008 GLY1 Threonine aldolas 100.0 1.5E-44 3.3E-49 296.9 33.0 338 5-350 1-341 (342)
3 PLN02721 threonine aldolase 100.0 1.9E-42 4.2E-47 305.3 35.2 350 1-352 3-352 (353)
4 COG0436 Aspartate/tyrosine/aro 100.0 7.8E-40 1.7E-44 287.1 30.4 329 4-353 29-392 (393)
5 PRK10534 L-threonine aldolase; 100.0 2.1E-38 4.5E-43 276.8 33.1 332 5-351 1-332 (333)
6 cd06502 TA_like Low-specificit 100.0 2E-36 4.3E-41 265.4 32.9 333 7-348 1-337 (338)
7 COG0156 BioF 7-keto-8-aminopel 100.0 6E-35 1.3E-39 250.4 29.0 326 3-349 39-387 (388)
8 PLN00175 aminotransferase fami 100.0 9.3E-35 2E-39 259.4 30.9 328 4-351 55-412 (413)
9 PRK06207 aspartate aminotransf 100.0 3E-34 6.5E-39 255.9 32.5 332 4-354 40-404 (405)
10 PRK06225 aspartate aminotransf 100.0 4.7E-34 1E-38 253.5 31.5 331 4-355 29-379 (380)
11 PF01212 Beta_elim_lyase: Beta 100.0 9.5E-37 2E-41 255.4 11.7 278 7-293 1-284 (290)
12 PLN00145 tyrosine/nicotianamin 100.0 1.1E-33 2.4E-38 253.4 32.2 338 4-356 53-428 (430)
13 TIGR03537 DapC succinyldiamino 100.0 7.6E-34 1.6E-38 249.3 30.1 322 4-348 1-349 (350)
14 PRK15481 transcriptional regul 100.0 7.2E-34 1.6E-38 256.1 29.7 323 4-351 86-430 (431)
15 PRK06348 aspartate aminotransf 100.0 3E-33 6.5E-38 248.4 31.5 328 3-349 29-382 (384)
16 PRK07681 aspartate aminotransf 100.0 3.1E-33 6.6E-38 249.6 31.7 324 4-348 33-384 (399)
17 PRK08960 hypothetical protein; 100.0 4.1E-33 8.8E-38 248.0 32.2 328 3-351 32-386 (387)
18 PLN02822 serine palmitoyltrans 100.0 1.6E-33 3.5E-38 254.3 29.6 337 3-354 109-479 (481)
19 PRK07366 succinyldiaminopimela 100.0 2.7E-33 5.9E-38 249.3 30.7 327 4-349 31-387 (388)
20 PRK07682 hypothetical protein; 100.0 2E-33 4.4E-38 249.5 29.7 330 4-353 21-377 (378)
21 PRK05957 aspartate aminotransf 100.0 5.5E-33 1.2E-37 247.0 32.2 333 3-354 27-387 (389)
22 PRK06108 aspartate aminotransf 100.0 5.1E-33 1.1E-37 247.7 31.9 328 4-351 25-381 (382)
23 PLN02187 rooty/superroot1 100.0 1.1E-32 2.3E-37 248.5 34.0 339 4-357 67-443 (462)
24 PRK08361 aspartate aminotransf 100.0 4.2E-33 9.2E-38 248.2 30.6 330 4-352 34-390 (391)
25 COG1167 ARO8 Transcriptional r 100.0 1.1E-32 2.4E-37 247.4 32.8 334 3-354 89-457 (459)
26 PRK07324 transaminase; Validat 100.0 3.2E-33 6.9E-38 246.8 28.6 302 31-353 55-371 (373)
27 PRK08068 transaminase; Reviewe 100.0 1.1E-32 2.3E-37 245.5 32.1 323 3-348 32-385 (389)
28 PLN02483 serine palmitoyltrans 100.0 1.6E-32 3.5E-37 248.3 33.5 336 3-355 100-469 (489)
29 PRK06290 aspartate aminotransf 100.0 6.4E-33 1.4E-37 246.9 30.4 333 4-354 45-407 (410)
30 PRK09147 succinyldiaminopimela 100.0 1.2E-32 2.7E-37 245.7 31.6 325 3-351 29-395 (396)
31 PRK12414 putative aminotransfe 100.0 7.4E-33 1.6E-37 245.8 29.3 326 4-348 30-383 (384)
32 TIGR01822 2am3keto_CoA 2-amino 100.0 7.6E-33 1.7E-37 247.4 29.5 332 3-354 38-391 (393)
33 PTZ00433 tyrosine aminotransfe 100.0 1.7E-32 3.6E-37 245.6 31.5 333 3-354 33-410 (412)
34 PLN03227 serine palmitoyltrans 100.0 1.5E-32 3.3E-37 242.9 30.6 334 6-354 1-384 (392)
35 TIGR03540 DapC_direct LL-diami 100.0 1.9E-32 4.1E-37 243.7 31.4 325 3-348 29-382 (383)
36 PRK13355 bifunctional HTH-doma 100.0 3.2E-32 7E-37 249.7 33.8 330 4-353 147-515 (517)
37 PLN02955 8-amino-7-oxononanoat 100.0 1.3E-32 2.8E-37 241.4 29.3 323 3-354 102-463 (476)
38 PRK07309 aromatic amino acid a 100.0 3.6E-32 7.8E-37 242.0 32.5 335 3-353 30-389 (391)
39 PF00155 Aminotran_1_2: Aminot 100.0 1.8E-32 4E-37 242.7 30.4 330 4-346 2-363 (363)
40 COG0520 csdA Selenocysteine ly 100.0 3.2E-32 6.9E-37 238.5 31.5 328 4-351 22-404 (405)
41 PRK01533 histidinol-phosphate 100.0 5.9E-33 1.3E-37 243.9 27.0 320 4-355 30-358 (366)
42 PLN02656 tyrosine transaminase 100.0 3.3E-32 7.2E-37 243.3 32.1 331 4-354 32-405 (409)
43 PRK05764 aspartate aminotransf 100.0 4.9E-32 1.1E-36 242.1 33.0 333 3-353 31-392 (393)
44 PRK08636 aspartate aminotransf 100.0 5E-32 1.1E-36 242.0 32.8 334 4-353 34-401 (403)
45 PRK13392 5-aminolevulinate syn 100.0 1.1E-32 2.4E-37 247.0 28.5 327 5-353 48-398 (410)
46 PRK09276 LL-diaminopimelate am 100.0 2.4E-32 5.2E-37 243.2 30.4 324 4-348 32-384 (385)
47 PRK07683 aminotransferase A; V 100.0 6.2E-32 1.3E-36 240.1 32.6 331 3-353 28-384 (387)
48 PRK09082 methionine aminotrans 100.0 1.6E-32 3.4E-37 244.0 28.8 328 4-348 31-385 (386)
49 PLN00143 tyrosine/nicotianamin 100.0 5.2E-32 1.1E-36 241.8 32.2 338 3-355 32-407 (409)
50 PRK07337 aminotransferase; Val 100.0 5E-32 1.1E-36 241.2 31.9 328 3-350 30-387 (388)
51 COG0079 HisC Histidinol-phosph 100.0 1.6E-32 3.5E-37 236.6 27.7 317 4-352 23-354 (356)
52 TIGR01264 tyr_amTase_E tyrosin 100.0 4.1E-32 8.8E-37 242.7 31.2 329 4-353 32-400 (401)
53 PRK08912 hypothetical protein; 100.0 2.8E-32 6.1E-37 242.8 30.0 330 4-352 27-386 (387)
54 KOG0259 Tyrosine aminotransfer 100.0 5.3E-32 1.2E-36 221.8 28.8 334 4-355 62-436 (447)
55 PRK08363 alanine aminotransfer 100.0 7.4E-32 1.6E-36 240.8 32.5 334 4-353 31-395 (398)
56 PRK07179 hypothetical protein; 100.0 4.3E-32 9.2E-37 242.9 30.4 322 4-354 55-400 (407)
57 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 3.6E-32 7.8E-37 241.3 29.6 324 15-354 31-383 (387)
58 TIGR01821 5aminolev_synth 5-am 100.0 3.2E-32 6.9E-37 243.5 29.1 329 4-354 46-398 (402)
59 PRK13238 tnaA tryptophanase/L- 100.0 1.4E-31 3E-36 239.6 32.9 332 7-353 49-434 (460)
60 TIGR03538 DapC_gpp succinyldia 100.0 8.5E-32 1.8E-36 240.1 31.2 323 3-349 28-392 (393)
61 PRK07550 hypothetical protein; 100.0 4.9E-32 1.1E-36 241.2 29.4 328 4-349 30-384 (386)
62 PRK06855 aminotransferase; Val 100.0 2E-31 4.2E-36 239.5 33.1 337 4-353 33-430 (433)
63 PTZ00377 alanine aminotransfer 100.0 2.6E-31 5.6E-36 241.9 34.0 314 32-357 109-480 (481)
64 PLN02231 alanine transaminase 100.0 2.6E-31 5.6E-36 241.9 33.6 345 3-357 129-532 (534)
65 TIGR01141 hisC histidinol-phos 100.0 3E-32 6.5E-37 239.4 26.3 315 3-347 19-346 (346)
66 PRK05942 aspartate aminotransf 100.0 1.9E-31 4.2E-36 237.7 31.7 323 4-347 36-387 (394)
67 TIGR03392 FeS_syn_CsdA cystein 100.0 1.6E-31 3.5E-36 238.9 30.9 326 4-353 16-396 (398)
68 PRK07777 aminotransferase; Val 100.0 1.7E-31 3.7E-36 237.8 30.8 329 3-350 24-384 (387)
69 TIGR01265 tyr_nico_aTase tyros 100.0 2.5E-31 5.4E-36 237.5 31.8 330 4-352 32-401 (403)
70 KOG0257 Kynurenine aminotransf 100.0 2.4E-32 5.2E-37 227.7 22.9 323 8-347 36-414 (420)
71 PRK09148 aminotransferase; Val 100.0 4E-31 8.6E-36 236.0 32.5 335 4-355 31-393 (405)
72 PRK07568 aspartate aminotransf 100.0 2.8E-31 6.2E-36 237.5 31.7 329 4-356 31-396 (397)
73 COG1168 MalY Bifunctional PLP- 100.0 1.9E-31 4.2E-36 220.1 27.9 318 17-353 40-387 (388)
74 PRK09064 5-aminolevulinate syn 100.0 1.8E-31 3.9E-36 239.2 29.9 330 3-354 46-399 (407)
75 TIGR00858 bioF 8-amino-7-oxono 100.0 1.4E-31 3.1E-36 237.0 28.9 321 4-347 17-360 (360)
76 PRK10874 cysteine sulfinate de 100.0 2.8E-31 6E-36 237.7 30.7 326 4-353 19-399 (401)
77 PRK04870 histidinol-phosphate 100.0 1.6E-31 3.5E-36 235.4 28.4 314 4-350 27-356 (356)
78 PRK02731 histidinol-phosphate 100.0 1.1E-31 2.4E-36 237.7 27.4 320 4-351 33-365 (367)
79 PRK09105 putative aminotransfe 100.0 1.8E-31 3.8E-36 235.1 28.5 314 3-350 43-368 (370)
80 PRK06107 aspartate aminotransf 100.0 5E-31 1.1E-35 235.5 31.6 332 4-353 34-401 (402)
81 PRK03158 histidinol-phosphate 100.0 9E-32 1.9E-36 237.4 26.5 316 4-349 30-358 (359)
82 PRK13393 5-aminolevulinate syn 100.0 3E-31 6.4E-36 237.3 29.7 329 3-353 45-397 (406)
83 PLN02450 1-aminocyclopropane-1 100.0 6.3E-31 1.4E-35 237.4 31.5 337 4-354 39-432 (468)
84 PRK09265 aminotransferase AlaT 100.0 1.2E-30 2.7E-35 233.3 32.9 331 4-353 34-402 (404)
85 PRK08153 histidinol-phosphate 100.0 2.2E-31 4.7E-36 234.9 27.6 322 5-354 34-367 (369)
86 cd00617 Tnase_like Tryptophana 100.0 1.4E-30 3.1E-35 229.7 32.6 335 5-354 22-410 (431)
87 PRK02610 histidinol-phosphate 100.0 4.7E-31 1E-35 233.4 29.2 322 4-353 29-372 (374)
88 cd06451 AGAT_like Alanine-glyo 100.0 5.3E-31 1.1E-35 232.5 29.2 316 14-351 8-356 (356)
89 PRK05166 histidinol-phosphate 100.0 2.8E-31 6.1E-36 234.7 27.2 318 4-350 37-369 (371)
90 PRK06836 aspartate aminotransf 100.0 9.1E-31 2E-35 233.2 30.6 326 4-354 34-393 (394)
91 PRK05387 histidinol-phosphate 100.0 3.9E-31 8.4E-36 233.0 27.7 314 4-351 25-352 (353)
92 PLN03026 histidinol-phosphate 100.0 7.1E-31 1.5E-35 232.3 29.5 315 4-349 53-379 (380)
93 PRK05958 8-amino-7-oxononanoat 100.0 8.5E-31 1.8E-35 234.0 29.9 324 3-350 39-385 (385)
94 COG1104 NifS Cysteine sulfinat 100.0 1.8E-31 3.8E-36 224.9 23.7 330 5-356 2-381 (386)
95 PRK08175 aminotransferase; Val 100.0 1.2E-30 2.5E-35 232.7 30.4 332 3-353 29-390 (395)
96 PLN02607 1-aminocyclopropane-1 100.0 2.5E-30 5.4E-35 231.7 31.9 338 5-355 49-440 (447)
97 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 1E-30 2.2E-35 230.8 29.0 299 38-353 51-369 (370)
98 PRK09295 bifunctional cysteine 100.0 1.4E-30 3.1E-35 233.2 30.4 325 4-351 23-403 (406)
99 PRK06358 threonine-phosphate d 100.0 2.2E-30 4.9E-35 227.2 30.3 317 4-350 20-353 (354)
100 PRK03321 putative aminotransfe 100.0 3.8E-31 8.3E-36 232.8 25.3 319 4-351 23-350 (352)
101 TIGR01979 sufS cysteine desulf 100.0 2.4E-30 5.1E-35 232.0 30.8 328 4-353 18-402 (403)
102 PRK07590 L,L-diaminopimelate a 100.0 1.5E-30 3.4E-35 232.9 29.4 323 3-350 34-409 (409)
103 cd06454 KBL_like KBL_like; thi 100.0 1.7E-30 3.7E-35 228.9 29.3 325 4-349 2-348 (349)
104 PRK08056 threonine-phosphate d 100.0 1.6E-30 3.6E-35 228.6 28.8 316 4-351 21-354 (356)
105 cd06453 SufS_like Cysteine des 100.0 1E-30 2.2E-35 232.2 27.8 319 7-346 2-373 (373)
106 PRK06939 2-amino-3-ketobutyrat 100.0 2.6E-30 5.7E-35 231.7 30.6 330 4-353 43-394 (397)
107 PRK05839 hypothetical protein; 100.0 3.3E-30 7.1E-35 227.9 30.2 317 4-351 25-373 (374)
108 PLN02855 Bifunctional selenocy 100.0 2.5E-30 5.5E-35 232.7 29.9 330 4-356 32-422 (424)
109 PLN02376 1-aminocyclopropane-1 100.0 6.3E-30 1.4E-34 231.6 32.5 336 5-354 48-440 (496)
110 PRK09275 aspartate aminotransf 100.0 8.7E-31 1.9E-35 235.0 26.6 333 4-357 101-522 (527)
111 PRK00950 histidinol-phosphate 100.0 2.2E-30 4.8E-35 228.9 27.6 311 4-351 35-361 (361)
112 PRK14807 histidinol-phosphate 100.0 1.1E-29 2.3E-34 223.0 31.5 313 4-350 23-350 (351)
113 COG0399 WecE Predicted pyridox 100.0 8E-30 1.7E-34 217.1 29.3 312 18-352 15-373 (374)
114 PRK13034 serine hydroxymethylt 100.0 1.8E-29 4E-34 224.8 32.7 323 8-352 34-392 (416)
115 PRK07865 N-succinyldiaminopime 100.0 4.2E-30 9.1E-35 227.0 28.3 309 4-347 28-363 (364)
116 TIGR02618 tyr_phenol_ly tyrosi 100.0 1E-29 2.2E-34 220.1 29.5 335 5-354 40-428 (450)
117 cd00609 AAT_like Aspartate ami 100.0 8.4E-30 1.8E-34 224.8 29.7 322 6-347 1-349 (350)
118 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 1.3E-29 2.8E-34 223.6 30.6 317 18-350 15-360 (361)
119 PRK14809 histidinol-phosphate 100.0 6E-30 1.3E-34 225.4 27.5 312 4-351 31-356 (357)
120 TIGR03402 FeS_nifS cysteine de 100.0 4.7E-30 1E-34 228.1 26.9 327 6-355 1-375 (379)
121 PRK06767 methionine gamma-lyas 100.0 1.3E-29 2.8E-34 224.0 29.1 312 9-352 30-385 (386)
122 TIGR01976 am_tr_V_VC1184 cyste 100.0 7E-30 1.5E-34 228.6 27.8 320 5-346 18-397 (397)
123 PTZ00376 aspartate aminotransf 100.0 8.9E-30 1.9E-34 227.4 27.6 323 3-351 29-402 (404)
124 PRK03317 histidinol-phosphate 100.0 1.8E-29 3.8E-34 223.3 29.0 315 5-352 28-364 (368)
125 TIGR03801 asp_4_decarbox aspar 100.0 1.3E-29 2.8E-34 227.2 28.3 333 4-356 95-520 (521)
126 TIGR03539 DapC_actino succinyl 100.0 1.2E-29 2.5E-34 223.3 27.4 308 4-346 22-356 (357)
127 TIGR03542 DAPAT_plant LL-diami 100.0 2.1E-29 4.6E-34 225.0 29.3 324 3-350 33-402 (402)
128 TIGR01437 selA_rel uncharacter 100.0 2.1E-29 4.4E-34 220.9 28.5 309 15-350 24-363 (363)
129 TIGR01825 gly_Cac_T_rel pyrido 100.0 3.1E-29 6.7E-34 223.7 30.2 328 3-353 33-382 (385)
130 PRK09257 aromatic amino acid a 100.0 4.1E-29 8.9E-34 222.9 30.3 323 4-350 27-396 (396)
131 cd00614 CGS_like CGS_like: Cys 100.0 3.2E-29 7E-34 220.7 28.8 309 10-350 10-368 (369)
132 PRK06425 histidinol-phosphate 100.0 5.4E-29 1.2E-33 216.7 29.7 301 5-350 18-331 (332)
133 PRK02948 cysteine desulfurase; 100.0 1.1E-29 2.3E-34 226.0 25.8 326 5-354 1-376 (381)
134 cd00378 SHMT Serine-glycine hy 100.0 1E-28 2.2E-33 221.4 32.0 329 5-352 21-385 (402)
135 PLN02397 aspartate transaminas 100.0 2.7E-29 5.8E-34 224.8 27.9 322 4-351 49-420 (423)
136 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 1E-28 2.2E-33 218.3 31.1 317 14-350 8-355 (355)
137 PLN02672 methionine S-methyltr 100.0 7E-29 1.5E-33 235.9 31.4 333 4-351 698-1079(1082)
138 PLN02242 methionine gamma-lyas 100.0 1.1E-28 2.3E-33 218.8 30.5 313 9-354 41-417 (418)
139 PRK09440 avtA valine--pyruvate 100.0 1.3E-28 2.8E-33 221.4 31.3 333 3-356 30-415 (416)
140 PF01041 DegT_DnrJ_EryC1: DegT 100.0 3.3E-29 7.1E-34 220.3 26.3 307 18-347 5-363 (363)
141 PRK00011 glyA serine hydroxyme 100.0 1.8E-28 4E-33 220.4 31.4 330 4-352 26-389 (416)
142 PLN02409 serine--glyoxylate am 100.0 5.5E-29 1.2E-33 221.6 27.6 325 14-354 18-374 (401)
143 TIGR02326 transamin_PhnW 2-ami 100.0 1.3E-28 2.8E-33 217.6 29.8 314 17-350 15-360 (363)
144 PRK07392 threonine-phosphate d 100.0 9.7E-29 2.1E-33 217.8 28.4 316 4-351 23-358 (360)
145 PRK01688 histidinol-phosphate 100.0 2.3E-29 4.9E-34 220.6 23.5 304 5-346 30-350 (351)
146 PRK04781 histidinol-phosphate 100.0 1.1E-28 2.5E-33 217.1 27.9 283 39-350 60-361 (364)
147 TIGR03403 nifS_epsilon cystein 100.0 7.5E-29 1.6E-33 220.5 27.0 326 6-355 1-378 (382)
148 TIGR01977 am_tr_V_EF2568 cyste 100.0 7.4E-29 1.6E-33 220.6 27.0 319 7-348 2-375 (376)
149 PRK08637 hypothetical protein; 100.0 4.3E-28 9.2E-33 215.6 31.6 322 17-353 22-387 (388)
150 PRK04073 rocD ornithine--oxo-a 100.0 2.7E-28 5.8E-33 217.4 29.7 320 3-350 40-395 (396)
151 PRK13479 2-aminoethylphosphona 100.0 2.8E-28 6.1E-33 216.0 29.7 324 10-353 10-364 (368)
152 PRK06234 methionine gamma-lyas 100.0 3.7E-28 7.9E-33 215.4 30.1 289 33-353 57-398 (400)
153 TIGR03576 pyridox_MJ0158 pyrid 100.0 1.4E-28 3.1E-33 213.3 26.9 295 18-350 36-345 (346)
154 PRK13520 L-tyrosine decarboxyl 100.0 2.8E-28 6.1E-33 216.5 29.3 321 9-351 25-370 (371)
155 PRK07908 hypothetical protein; 100.0 1.8E-28 3.8E-33 215.4 27.3 309 3-351 22-346 (349)
156 cd00616 AHBA_syn 3-amino-5-hyd 100.0 1.8E-28 3.9E-33 216.3 27.3 291 34-347 14-352 (352)
157 TIGR02006 IscS cysteine desulf 100.0 1.3E-28 2.7E-33 220.0 26.5 327 5-354 4-379 (402)
158 PRK03244 argD acetylornithine 100.0 6.4E-28 1.4E-32 215.6 30.7 324 3-354 43-396 (398)
159 PRK13580 serine hydroxymethylt 100.0 1.1E-27 2.5E-32 210.5 31.5 318 17-353 62-446 (493)
160 KOG1360 5-aminolevulinate synt 100.0 8.8E-29 1.9E-33 204.0 22.2 323 10-354 178-526 (570)
161 PRK00854 rocD ornithine--oxo-a 100.0 7.3E-28 1.6E-32 215.5 30.2 324 3-351 41-400 (401)
162 PRK11658 UDP-4-amino-4-deoxy-L 100.0 9.9E-28 2.1E-32 211.8 30.6 294 35-350 30-377 (379)
163 PRK01278 argD acetylornithine 100.0 5.2E-28 1.1E-32 215.5 29.1 328 3-352 31-388 (389)
164 PRK09028 cystathionine beta-ly 100.0 7.5E-28 1.6E-32 210.6 29.3 307 18-355 39-390 (394)
165 PRK05664 threonine-phosphate d 100.0 5.4E-28 1.2E-32 210.1 28.0 300 4-352 21-328 (330)
166 TIGR01328 met_gam_lyase methio 100.0 7.5E-28 1.6E-32 212.5 29.2 286 37-352 58-390 (391)
167 PRK08249 cystathionine gamma-s 100.0 1.1E-27 2.3E-32 211.6 30.2 288 36-355 62-396 (398)
168 PRK04635 histidinol-phosphate 100.0 1.3E-28 2.9E-33 216.3 24.3 304 5-349 33-352 (354)
169 PF00266 Aminotran_5: Aminotra 100.0 4.6E-28 1E-32 214.6 27.0 314 6-342 1-371 (371)
170 cd06450 DOPA_deC_like DOPA dec 100.0 4E-28 8.8E-33 213.4 26.4 300 18-348 13-344 (345)
171 cd00613 GDC-P Glycine cleavage 100.0 7.7E-28 1.7E-32 215.6 28.4 322 4-346 21-398 (398)
172 PTZ00125 ornithine aminotransf 100.0 1.9E-27 4E-32 213.0 30.4 328 3-354 31-397 (400)
173 PRK06959 putative threonine-ph 100.0 7.5E-28 1.6E-32 209.6 27.0 301 4-355 25-336 (339)
174 PRK07503 methionine gamma-lyas 100.0 2.2E-27 4.9E-32 210.3 30.0 287 36-354 63-398 (403)
175 TIGR02617 tnaA_trp_ase tryptop 100.0 2.6E-27 5.7E-32 203.0 29.2 339 5-354 43-443 (467)
176 TIGR00707 argD acetylornithine 100.0 9.5E-28 2.1E-32 213.6 27.3 324 3-350 27-379 (379)
177 PRK14808 histidinol-phosphate 100.0 1.8E-27 3.8E-32 207.0 28.2 300 4-348 20-333 (335)
178 PRK07504 O-succinylhomoserine 100.0 3.2E-27 7E-32 209.0 30.1 286 37-354 64-397 (398)
179 cd00610 OAT_like Acetyl ornith 100.0 1.3E-27 2.7E-32 215.4 27.9 337 3-350 36-413 (413)
180 TIGR03588 PseC UDP-4-keto-6-de 100.0 3.6E-27 7.9E-32 209.2 30.3 300 34-350 25-380 (380)
181 COG4992 ArgD Ornithine/acetylo 100.0 4.7E-27 1E-31 197.8 29.1 329 3-355 42-401 (404)
182 PRK07810 O-succinylhomoserine 100.0 4.5E-27 9.7E-32 208.0 30.1 284 36-350 68-402 (403)
183 PRK14012 cysteine desulfurase; 100.0 1.2E-27 2.7E-32 214.0 26.9 327 5-354 4-381 (404)
184 TIGR03246 arg_catab_astC succi 100.0 5.7E-27 1.2E-31 208.4 30.9 328 3-353 35-396 (397)
185 PLN02651 cysteine desulfurase 100.0 4.4E-28 9.5E-33 214.0 23.4 310 6-340 1-364 (364)
186 KOG0634 Aromatic amino acid am 100.0 1.4E-26 3E-31 193.4 30.6 315 33-355 95-469 (472)
187 TIGR03812 tyr_de_CO2_Arch tyro 100.0 6.2E-27 1.3E-31 208.0 30.6 289 38-348 59-372 (373)
188 TIGR01140 L_thr_O3P_dcar L-thr 100.0 1.3E-27 2.8E-32 207.8 25.3 300 3-346 17-329 (330)
189 PRK13237 tyrosine phenol-lyase 100.0 8E-27 1.7E-31 202.8 29.7 336 5-354 47-435 (460)
190 PRK02627 acetylornithine amino 100.0 5.4E-27 1.2E-31 209.9 29.5 328 3-353 39-395 (396)
191 PRK08861 cystathionine gamma-s 100.0 3.9E-27 8.4E-32 206.4 27.7 287 37-355 52-386 (388)
192 TIGR02379 ECA_wecE TDP-4-keto- 100.0 4.9E-27 1.1E-31 206.3 28.2 307 19-350 12-375 (376)
193 PRK11706 TDP-4-oxo-6-deoxy-D-g 100.0 8.6E-27 1.9E-31 205.9 29.8 305 21-350 14-374 (375)
194 PRK15407 lipopolysaccharide bi 100.0 1.2E-26 2.6E-31 207.1 30.9 295 36-351 61-435 (438)
195 PRK05937 8-amino-7-oxononanoat 100.0 1.5E-26 3.4E-31 204.2 31.2 325 3-355 4-353 (370)
196 TIGR01885 Orn_aminotrans ornit 100.0 9.4E-27 2E-31 208.0 30.1 327 3-350 37-400 (401)
197 COG0075 Serine-pyruvate aminot 100.0 1.5E-26 3.2E-31 196.9 29.6 319 17-355 17-366 (383)
198 PRK02936 argD acetylornithine 100.0 9E-27 2E-31 206.8 29.6 321 3-350 29-377 (377)
199 PRK08133 O-succinylhomoserine 100.0 1.2E-26 2.7E-31 204.9 30.1 283 37-351 60-389 (390)
200 PRK08574 cystathionine gamma-s 100.0 4.5E-27 9.8E-32 207.0 26.9 283 37-352 52-384 (385)
201 PRK12381 bifunctional succinyl 100.0 1.6E-26 3.5E-31 206.1 30.8 332 3-356 39-403 (406)
202 PRK05968 hypothetical protein; 100.0 1.3E-26 2.9E-31 204.6 29.8 283 37-353 62-387 (389)
203 PRK05093 argD bifunctional N-s 100.0 1.9E-26 4.2E-31 205.9 30.4 327 3-353 40-401 (403)
204 PLN02368 alanine transaminase 100.0 6.7E-27 1.4E-31 206.9 26.3 274 16-299 82-398 (407)
205 PRK03967 histidinol-phosphate 100.0 1.4E-26 3E-31 201.9 27.8 303 5-353 20-335 (337)
206 TIGR01324 cysta_beta_ly_B cyst 100.0 1.5E-26 3.2E-31 202.7 27.7 285 37-352 49-376 (377)
207 KOG1359 Glycine C-acetyltransf 100.0 3.7E-27 8E-32 187.0 21.0 326 2-353 66-413 (417)
208 PF01053 Cys_Met_Meta_PP: Cys/ 100.0 6.1E-26 1.3E-30 197.5 30.3 306 12-351 28-386 (386)
209 PRK07050 cystathionine beta-ly 100.0 3.8E-26 8.1E-31 201.7 29.4 287 36-353 63-392 (394)
210 TIGR01325 O_suc_HS_sulf O-succ 100.0 3.6E-26 7.8E-31 201.7 29.1 281 37-350 53-380 (380)
211 PRK08114 cystathionine beta-ly 100.0 4.6E-26 1E-30 198.6 29.3 291 32-353 54-394 (395)
212 PRK07811 cystathionine gamma-s 100.0 2.4E-26 5.1E-31 203.0 27.8 284 36-351 59-387 (388)
213 PRK06702 O-acetylhomoserine am 100.0 3.4E-26 7.3E-31 201.8 28.5 310 12-352 33-424 (432)
214 PRK06460 hypothetical protein; 100.0 3.8E-26 8.2E-31 200.9 28.7 285 37-353 44-375 (376)
215 PRK08248 O-acetylhomoserine am 100.0 3.6E-26 7.7E-31 203.4 28.8 286 37-354 63-429 (431)
216 PRK08354 putative aminotransfe 100.0 2.5E-26 5.4E-31 198.2 27.0 293 4-349 9-309 (311)
217 PRK08045 cystathionine gamma-s 100.0 4.5E-26 9.7E-31 200.5 28.9 287 37-355 51-385 (386)
218 PRK08776 cystathionine gamma-s 100.0 6.4E-26 1.4E-30 200.6 29.3 285 37-353 59-391 (405)
219 PLN02624 ornithine-delta-amino 100.0 1.6E-25 3.4E-30 202.4 30.4 330 3-353 75-445 (474)
220 PRK08247 cystathionine gamma-s 100.0 6.6E-26 1.4E-30 199.2 27.0 282 37-352 51-364 (366)
221 PRK06084 O-acetylhomoserine am 100.0 1.4E-25 3E-30 199.5 29.2 285 37-353 57-423 (425)
222 KOG0256 1-aminocyclopropane-1- 100.0 1.4E-25 3.1E-30 185.9 27.1 309 34-353 117-462 (471)
223 TIGR02080 O_succ_thio_ly O-suc 100.0 1.1E-25 2.4E-30 198.0 27.6 285 36-352 49-381 (382)
224 PRK07812 O-acetylhomoserine am 100.0 2.2E-25 4.7E-30 197.9 29.5 288 37-355 68-434 (436)
225 TIGR01788 Glu-decarb-GAD gluta 100.0 1.5E-25 3.4E-30 198.4 28.3 326 13-353 50-430 (431)
226 PRK07505 hypothetical protein; 100.0 9E-26 2E-30 201.7 27.1 322 3-352 46-399 (402)
227 PRK08134 O-acetylhomoserine am 100.0 3.3E-25 7.2E-30 197.1 29.7 287 37-355 63-430 (433)
228 TIGR01329 cysta_beta_ly_E cyst 100.0 1.7E-25 3.6E-30 196.9 27.6 283 37-353 46-376 (378)
229 PTZ00094 serine hydroxymethylt 100.0 1.9E-25 4E-30 201.7 28.0 318 17-352 47-408 (452)
230 PRK05939 hypothetical protein; 99.9 2.7E-25 5.8E-30 196.1 27.8 283 37-352 46-396 (397)
231 PRK07049 methionine gamma-lyas 99.9 2.4E-25 5.3E-30 198.3 27.5 293 37-352 82-426 (427)
232 PRK07269 cystathionine gamma-s 99.9 2.5E-25 5.4E-30 194.3 26.3 279 37-351 53-363 (364)
233 PRK05967 cystathionine beta-ly 99.9 5.2E-25 1.1E-29 192.3 27.8 287 36-353 62-392 (395)
234 PRK06176 cystathionine gamma-s 99.9 3.4E-25 7.3E-30 194.8 26.5 283 37-353 49-379 (380)
235 PLN00144 acetylornithine trans 99.9 8.3E-25 1.8E-29 193.0 28.9 323 3-353 15-381 (382)
236 PRK07671 cystathionine beta-ly 99.9 5.4E-25 1.2E-29 193.5 27.5 280 37-350 49-376 (377)
237 TIGR01814 kynureninase kynuren 99.9 2.1E-25 4.5E-30 199.6 25.2 326 3-350 26-405 (406)
238 COG0112 GlyA Glycine/serine hy 99.9 1.1E-24 2.4E-29 180.9 27.3 323 9-352 33-390 (413)
239 PLN03226 serine hydroxymethylt 99.9 1.5E-24 3.3E-29 194.6 30.5 322 9-353 41-420 (475)
240 PLN02509 cystathionine beta-ly 99.9 7.9E-25 1.7E-29 194.9 28.2 281 37-351 132-460 (464)
241 PRK05994 O-acetylhomoserine am 99.9 1.1E-24 2.3E-29 194.4 29.1 284 37-352 62-426 (427)
242 PRK05613 O-acetylhomoserine am 99.9 9.4E-25 2E-29 194.0 28.6 285 37-352 68-436 (437)
243 PRK04366 glycine dehydrogenase 99.9 1.9E-24 4E-29 196.0 29.4 317 18-355 84-451 (481)
244 PRK02769 histidine decarboxyla 99.9 1.1E-24 2.3E-29 190.6 26.8 289 39-353 66-373 (380)
245 COG0160 GabT 4-aminobutyrate a 99.9 4.9E-24 1.1E-28 185.1 30.6 339 3-353 56-446 (447)
246 COG0626 MetC Cystathionine bet 99.9 3.9E-24 8.5E-29 183.5 29.0 285 37-353 62-395 (396)
247 PLN02590 probable tyrosine dec 99.9 1.1E-23 2.4E-28 190.0 33.1 311 33-355 161-535 (539)
248 PRK04612 argD acetylornithine 99.9 7.1E-24 1.5E-28 188.0 31.4 334 3-356 40-407 (408)
249 PRK08064 cystathionine beta-ly 99.9 1.8E-24 4E-29 191.1 27.3 245 37-311 53-318 (390)
250 PRK05964 adenosylmethionine--8 99.9 2.7E-24 5.8E-29 192.8 28.2 339 3-353 42-423 (423)
251 PF00464 SHMT: Serine hydroxym 99.9 5.3E-24 1.2E-28 183.5 28.4 312 17-346 33-399 (399)
252 PLN02880 tyrosine decarboxylas 99.9 6.4E-24 1.4E-28 191.6 29.7 311 34-356 114-488 (490)
253 PRK00451 glycine dehydrogenase 99.9 3E-24 6.6E-29 194.7 27.8 283 40-350 114-446 (447)
254 PRK03080 phosphoserine aminotr 99.9 4.1E-24 8.9E-29 188.8 27.9 323 2-354 10-375 (378)
255 PRK11522 putrescine--2-oxoglut 99.9 7E-24 1.5E-28 190.0 29.6 335 3-356 82-455 (459)
256 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 4.4E-24 9.5E-29 190.5 28.0 283 36-350 55-417 (418)
257 PRK04013 argD acetylornithine/ 99.9 1.9E-23 4.1E-28 181.7 31.0 314 3-354 24-362 (364)
258 PLN03032 serine decarboxylase; 99.9 3.3E-24 7.1E-29 186.0 26.1 286 38-348 66-372 (374)
259 TIGR00713 hemL glutamate-1-sem 99.9 5.1E-24 1.1E-28 191.7 28.1 330 3-352 48-422 (423)
260 PRK03715 argD acetylornithine 99.9 5.3E-24 1.2E-28 188.4 27.5 326 3-353 36-394 (395)
261 PLN02271 serine hydroxymethylt 99.9 1.1E-23 2.3E-28 186.1 29.0 314 17-351 161-539 (586)
262 PRK04260 acetylornithine amino 99.9 1.4E-23 3E-28 186.0 29.4 320 3-349 29-374 (375)
263 TIGR03372 putres_am_tran putre 99.9 2.2E-23 4.7E-28 185.5 30.6 329 3-350 75-442 (442)
264 TIGR03235 DNA_S_dndA cysteine 99.9 8.2E-25 1.8E-29 192.7 21.1 289 8-321 2-321 (353)
265 PRK06434 cystathionine gamma-l 99.9 7.6E-24 1.6E-28 185.1 26.5 280 36-351 62-383 (384)
266 PRK08117 4-aminobutyrate amino 99.9 1.7E-23 3.6E-28 188.3 29.5 340 3-355 43-432 (433)
267 PRK08360 4-aminobutyrate amino 99.9 8E-23 1.7E-27 183.1 32.3 339 3-355 41-429 (443)
268 PRK07582 cystathionine gamma-l 99.9 1.3E-23 2.7E-28 184.4 26.6 276 36-351 49-364 (366)
269 PRK09792 4-aminobutyrate trans 99.9 2.7E-23 5.8E-28 185.6 27.9 334 3-351 40-420 (421)
270 COG0001 HemL Glutamate-1-semia 99.9 3E-23 6.6E-28 176.8 26.7 336 4-355 54-431 (432)
271 COG2873 MET17 O-acetylhomoseri 99.9 9.1E-23 2E-27 167.8 27.9 303 18-352 40-425 (426)
272 PLN02760 4-aminobutyrate:pyruv 99.9 1E-22 2.2E-27 184.3 30.4 339 3-354 89-493 (504)
273 KOG1549 Cysteine desulfurase N 99.9 3E-24 6.4E-29 182.0 19.0 201 4-221 43-257 (428)
274 PRK08593 4-aminobutyrate amino 99.9 2.7E-22 5.9E-27 179.9 32.2 338 3-355 42-432 (445)
275 TIGR03799 NOD_PanD_pyr putativ 99.9 2.6E-22 5.6E-27 181.4 31.7 302 31-345 118-518 (522)
276 PLN02414 glycine dehydrogenase 99.9 4.1E-23 8.8E-28 196.5 26.8 301 38-355 568-910 (993)
277 TIGR03531 selenium_SpcS O-phos 99.9 4.2E-23 9E-28 181.9 25.0 299 38-350 105-444 (444)
278 PRK06058 4-aminobutyrate amino 99.9 2.4E-22 5.1E-27 180.8 30.4 333 3-352 56-442 (443)
279 PRK07495 4-aminobutyrate amino 99.9 2.9E-22 6.3E-27 178.7 30.6 337 3-354 40-423 (425)
280 TIGR02407 ectoine_ectB diamino 99.9 2.4E-22 5.1E-27 179.1 29.7 334 3-352 35-412 (412)
281 PRK06943 adenosylmethionine--8 99.9 5.6E-22 1.2E-26 177.9 32.1 336 3-355 54-449 (453)
282 PRK08088 4-aminobutyrate amino 99.9 3.6E-22 7.7E-27 179.3 30.8 338 3-353 41-424 (425)
283 PRK12403 putative aminotransfe 99.9 5.5E-22 1.2E-26 178.5 31.9 340 4-358 55-458 (460)
284 PLN02263 serine decarboxylase 99.9 2.1E-22 4.5E-27 177.1 28.2 288 41-353 136-444 (470)
285 PRK06105 aminotransferase; Pro 99.9 6E-22 1.3E-26 178.3 31.9 341 3-355 48-452 (460)
286 PRK06777 4-aminobutyrate amino 99.9 4.8E-22 1E-26 177.6 31.0 334 3-351 40-420 (421)
287 PRK06173 adenosylmethionine--8 99.9 4.4E-22 9.5E-27 177.4 30.4 336 3-354 44-427 (429)
288 TIGR00709 dat 2,4-diaminobutyr 99.9 6.1E-22 1.3E-26 177.9 31.2 339 3-356 39-439 (442)
289 PRK06541 hypothetical protein; 99.9 7.5E-22 1.6E-26 177.5 31.7 340 3-354 52-457 (460)
290 PRK07678 aminotransferase; Val 99.9 8.5E-22 1.8E-26 177.1 32.0 338 3-353 47-450 (451)
291 PRK07986 adenosylmethionine--8 99.9 3.3E-22 7.2E-27 177.9 28.6 333 3-352 43-423 (428)
292 PRK09264 diaminobutyrate--2-ox 99.9 9.2E-22 2E-26 176.2 31.5 338 3-355 39-419 (425)
293 PRK05630 adenosylmethionine--8 99.9 7.3E-22 1.6E-26 175.8 30.6 329 3-352 40-420 (422)
294 PRK07482 hypothetical protein; 99.9 1.1E-21 2.3E-26 176.7 31.6 340 3-355 50-457 (461)
295 PRK05965 hypothetical protein; 99.9 1.4E-21 3E-26 175.9 32.0 344 3-354 46-449 (459)
296 PRK06918 4-aminobutyrate amino 99.9 1.1E-21 2.5E-26 176.9 31.3 342 3-357 54-448 (451)
297 TIGR00700 GABAtrnsam 4-aminobu 99.9 1.4E-21 3.1E-26 175.0 31.5 334 3-351 33-419 (420)
298 PRK06062 hypothetical protein; 99.9 1.6E-21 3.5E-26 175.1 31.0 337 3-355 53-448 (451)
299 PRK05639 4-aminobutyrate amino 99.9 2.7E-21 5.9E-26 173.5 32.2 339 3-354 53-445 (457)
300 PRK00062 glutamate-1-semialdeh 99.9 6.2E-22 1.3E-26 177.5 27.8 331 3-353 50-425 (426)
301 PRK05769 4-aminobutyrate amino 99.9 1.9E-21 4.2E-26 174.3 30.9 337 3-353 54-440 (441)
302 PF12897 Aminotran_MocR: Alani 99.9 8.3E-22 1.8E-26 163.8 26.0 308 33-355 63-418 (425)
303 PLN02724 Molybdenum cofactor s 99.9 3.9E-22 8.3E-27 191.1 27.5 340 4-351 34-487 (805)
304 PRK06917 hypothetical protein; 99.9 4.1E-21 8.9E-26 172.3 32.4 343 3-357 31-442 (447)
305 PRK07046 aminotransferase; Val 99.9 2.5E-21 5.5E-26 173.5 31.0 329 4-354 76-452 (453)
306 PRK12389 glutamate-1-semialdeh 99.9 2.5E-21 5.3E-26 173.4 29.7 329 3-352 53-427 (428)
307 PRK08742 adenosylmethionine--8 99.9 4.1E-21 9E-26 172.7 30.9 338 3-354 64-469 (472)
308 PRK08297 L-lysine aminotransfe 99.9 3.6E-21 7.8E-26 172.5 30.3 333 3-353 45-442 (443)
309 PRK04311 selenocysteine syntha 99.9 4.7E-21 1E-25 170.9 30.7 316 16-351 98-463 (464)
310 PRK07030 adenosylmethionine--8 99.9 4.5E-21 9.8E-26 172.5 30.9 337 3-353 47-447 (466)
311 PRK09221 beta alanine--pyruvat 99.9 7E-21 1.5E-25 170.7 31.9 337 3-353 49-444 (445)
312 PRK07480 putative aminotransfe 99.9 3.9E-21 8.4E-26 172.7 30.2 340 3-356 50-452 (456)
313 KOG0053 Cystathionine beta-lya 99.9 1.8E-21 4E-26 164.8 26.3 284 37-353 76-407 (409)
314 PRK15029 arginine decarboxylas 99.9 8.7E-22 1.9E-26 182.7 26.6 310 31-351 198-603 (755)
315 TIGR00508 bioA adenosylmethion 99.9 3.4E-21 7.4E-26 172.1 29.7 336 3-352 45-426 (427)
316 PRK13360 omega amino acid--pyr 99.9 5.6E-21 1.2E-25 171.2 31.0 338 3-353 46-441 (442)
317 COG0161 BioA Adenosylmethionin 99.9 1.1E-21 2.5E-26 169.4 25.3 339 4-355 45-446 (449)
318 PRK07483 hypothetical protein; 99.9 1.1E-20 2.4E-25 169.3 32.7 342 3-355 30-440 (443)
319 COG3977 Alanine-alpha-ketoisov 99.9 1.5E-21 3.3E-26 155.8 24.0 300 33-356 69-415 (417)
320 PRK06082 4-aminobutyrate amino 99.9 5.8E-21 1.3E-25 171.7 30.7 336 3-356 72-455 (459)
321 PRK06916 adenosylmethionine--8 99.9 4E-21 8.7E-26 172.9 29.7 338 3-354 56-457 (460)
322 PF01276 OKR_DC_1: Orn/Lys/Arg 99.9 9.1E-23 2E-27 176.7 18.2 292 32-337 60-416 (417)
323 PRK07481 hypothetical protein; 99.9 1E-20 2.2E-25 170.0 32.2 337 3-354 42-447 (449)
324 PLN02482 glutamate-1-semialdeh 99.9 4.8E-21 1E-25 171.9 29.8 332 3-352 99-473 (474)
325 PRK06938 diaminobutyrate--2-ox 99.9 6E-21 1.3E-25 171.7 30.5 337 3-354 63-462 (464)
326 KOG1402 Ornithine aminotransfe 99.9 3.9E-21 8.4E-26 155.3 25.4 327 3-351 59-426 (427)
327 KOG2862 Alanine-glyoxylate ami 99.9 2.8E-21 6E-26 155.0 24.3 315 18-352 30-382 (385)
328 PRK00615 glutamate-1-semialdeh 99.9 6.4E-21 1.4E-25 169.8 29.5 334 3-354 53-430 (433)
329 PRK05355 3-phosphoserine/phosp 99.9 9.5E-22 2.1E-26 171.9 23.7 309 13-352 11-358 (360)
330 PRK06149 hypothetical protein; 99.9 5E-21 1.1E-25 186.7 31.1 343 3-352 585-970 (972)
331 PRK07036 hypothetical protein; 99.9 1.9E-20 4.1E-25 168.7 32.2 339 3-355 51-455 (466)
332 cd00615 Orn_deC_like Ornithine 99.9 2E-22 4.3E-27 172.3 18.4 228 32-275 53-293 (294)
333 COG1103 Archaea-specific pyrid 99.9 6.6E-21 1.4E-25 150.0 24.2 319 18-353 31-381 (382)
334 KOG0633 Histidinol phosphate a 99.9 2.5E-21 5.4E-26 151.5 21.6 270 57-349 89-374 (375)
335 TIGR00474 selA seryl-tRNA(sec) 99.9 5.3E-21 1.1E-25 170.1 26.7 310 16-346 93-453 (454)
336 KOG1357 Serine palmitoyltransf 99.9 2.5E-22 5.3E-27 168.8 16.6 318 16-351 156-501 (519)
337 PRK05367 glycine dehydrogenase 99.9 6.9E-21 1.5E-25 182.3 27.1 335 4-355 500-878 (954)
338 PRK12566 glycine dehydrogenase 99.9 3.6E-21 7.7E-26 180.0 24.3 299 38-355 543-879 (954)
339 PRK06931 diaminobutyrate--2-ox 99.9 4.9E-20 1.1E-24 165.7 30.4 339 3-355 58-457 (459)
340 TIGR01366 serC_3 phosphoserine 99.9 9.8E-21 2.1E-25 165.9 25.1 302 18-353 16-361 (361)
341 TIGR03251 LAT_fam L-lysine 6-t 99.9 1.6E-20 3.5E-25 168.2 26.7 328 3-348 38-430 (431)
342 PRK06148 hypothetical protein; 99.9 4.8E-20 1E-24 179.9 31.5 338 3-353 624-1011(1013)
343 cd00611 PSAT_like Phosphoserin 99.9 2.8E-21 6.1E-26 169.4 20.7 311 7-349 2-353 (355)
344 COG1448 TyrB Aspartate/tyrosin 99.9 7.1E-20 1.5E-24 152.0 27.2 310 18-349 47-395 (396)
345 COG0076 GadB Glutamate decarbo 99.9 1.2E-20 2.6E-25 167.6 23.7 289 14-318 72-400 (460)
346 TIGR00461 gcvP glycine dehydro 99.9 5.7E-20 1.2E-24 173.1 29.2 300 38-355 530-870 (939)
347 TIGR01364 serC_1 phosphoserine 99.9 3.6E-20 7.9E-25 161.1 25.7 283 38-352 37-348 (349)
348 PRK13578 ornithine decarboxyla 99.9 7.7E-20 1.7E-24 168.1 27.1 310 33-352 169-565 (720)
349 KOG0258 Alanine aminotransfera 99.9 8.3E-20 1.8E-24 150.9 23.8 312 31-355 106-472 (475)
350 PRK15400 lysine decarboxylase 99.9 6.5E-20 1.4E-24 168.4 25.6 305 32-351 189-558 (714)
351 PRK15399 lysine decarboxylase 99.9 2.5E-19 5.5E-24 164.6 29.0 304 32-351 189-558 (713)
352 TIGR00699 GABAtrns_euk 4-amino 99.9 1E-19 2.2E-24 162.4 24.8 329 3-350 58-464 (464)
353 PF00282 Pyridoxal_deC: Pyrido 99.9 7.7E-20 1.7E-24 159.9 21.8 254 33-297 70-373 (373)
354 PRK06209 glutamate-1-semialdeh 99.9 4E-19 8.7E-24 159.2 26.7 325 3-354 48-407 (431)
355 COG3033 TnaA Tryptophanase [Am 99.8 4.3E-18 9.4E-23 139.5 24.2 340 5-355 48-447 (471)
356 TIGR01365 serC_2 phosphoserine 99.8 2E-18 4.4E-23 150.0 23.8 305 18-351 16-372 (374)
357 KOG1358 Serine palmitoyltransf 99.8 3E-19 6.5E-24 147.7 16.9 335 4-353 95-466 (467)
358 KOG1401 Acetylornithine aminot 99.8 1.6E-17 3.4E-22 138.9 24.0 337 3-354 56-432 (433)
359 KOG1404 Alanine-glyoxylate ami 99.8 4.1E-17 8.9E-22 135.4 26.1 333 3-346 50-432 (442)
360 cd01494 AAT_I Aspartate aminot 99.8 8.4E-19 1.8E-23 138.1 15.6 165 40-220 2-170 (170)
361 PLN02452 phosphoserine transam 99.8 2.5E-17 5.5E-22 143.2 26.0 316 5-352 8-363 (365)
362 PLN02974 adenosylmethionine-8- 99.8 5.6E-17 1.2E-21 153.2 30.3 337 4-350 366-816 (817)
363 COG1982 LdcC Arginine/lysine/o 99.8 2.8E-17 6.1E-22 145.3 25.3 295 36-347 68-403 (557)
364 PRK05367 glycine dehydrogenase 99.8 4.5E-17 9.7E-22 156.4 27.6 274 40-347 123-437 (954)
365 COG1003 GcvP Glycine cleavage 99.8 4.1E-17 8.9E-22 137.3 22.4 296 38-355 109-450 (496)
366 TIGR03811 tyr_de_CO2_Ent tyros 99.8 5.4E-16 1.2E-20 141.8 29.9 261 31-297 112-502 (608)
367 PLN02414 glycine dehydrogenase 99.8 1.8E-16 3.8E-21 151.7 26.2 299 16-348 117-465 (993)
368 PRK12462 phosphoserine aminotr 99.8 9.5E-16 2.1E-20 131.9 27.2 316 3-352 3-362 (364)
369 PF06838 Met_gamma_lyase: Meth 99.8 3.9E-15 8.4E-20 123.6 26.9 274 18-313 27-332 (403)
370 COG3844 Kynureninase [Amino ac 99.7 1E-15 2.2E-20 124.3 20.5 287 41-354 79-404 (407)
371 PF00202 Aminotran_3: Aminotra 99.7 1.9E-16 4.1E-21 137.6 17.6 259 4-277 17-316 (339)
372 KOG2467 Glycine/serine hydroxy 99.7 2E-15 4.3E-20 124.3 21.2 315 18-351 54-425 (477)
373 KOG0629 Glutamate decarboxylas 99.7 2.4E-15 5.3E-20 126.2 16.8 304 41-350 144-507 (510)
374 KOG0628 Aromatic-L-amino-acid/ 99.7 5.6E-14 1.2E-18 119.4 24.1 323 18-354 87-473 (511)
375 PF02347 GDC-P: Glycine cleava 99.7 1.1E-13 2.5E-18 120.3 25.3 276 40-346 112-429 (429)
376 TIGR00461 gcvP glycine dehydro 99.7 1.5E-13 3.2E-18 130.3 27.3 274 40-347 111-426 (939)
377 KOG1383 Glutamate decarboxylas 99.6 6.2E-14 1.3E-18 119.4 17.7 298 41-357 123-451 (491)
378 COG0403 GcvP Glycine cleavage 99.6 2E-12 4.4E-17 109.4 26.6 282 41-349 123-447 (450)
379 KOG1412 Aspartate aminotransfe 99.6 1.7E-12 3.6E-17 105.0 22.4 300 34-355 70-408 (410)
380 KOG1411 Aspartate aminotransfe 99.6 3.5E-13 7.5E-18 110.4 18.5 310 18-351 73-424 (427)
381 COG1921 SelA Selenocysteine sy 99.5 1.1E-12 2.5E-17 111.4 19.0 218 17-256 40-270 (395)
382 PF03841 SelA: L-seryl-tRNA se 99.5 4.3E-14 9.4E-19 118.9 8.9 243 18-277 20-296 (367)
383 PF05889 SLA_LP_auto_ag: Solub 99.5 4.3E-12 9.4E-17 107.9 20.5 294 42-351 60-389 (389)
384 KOG1403 Predicted alanine-glyo 99.5 5.6E-12 1.2E-16 101.6 20.0 331 15-354 61-439 (452)
385 KOG2040 Glycine dehydrogenase 99.5 2.1E-12 4.5E-17 114.2 16.9 299 37-354 581-920 (1001)
386 PRK12566 glycine dehydrogenase 99.4 1.7E-10 3.6E-15 109.4 26.8 273 40-347 126-439 (954)
387 COG4100 Cystathionine beta-lya 99.4 4.7E-11 1E-15 96.3 18.9 278 18-313 38-343 (416)
388 COG1932 SerC Phosphoserine ami 99.3 9.9E-10 2.1E-14 91.9 22.2 318 4-353 5-364 (365)
389 KOG1405 4-aminobutyrate aminot 99.3 3.1E-10 6.7E-15 93.7 16.8 222 117-352 254-483 (484)
390 KOG3846 L-kynurenine hydrolase 99.3 1.2E-09 2.5E-14 88.8 19.7 296 41-354 114-463 (465)
391 PF04864 Alliinase_C: Allinase 99.3 3.5E-10 7.6E-15 93.8 16.6 274 39-349 44-362 (363)
392 KOG3843 Predicted serine hydro 99.1 3E-09 6.5E-14 84.6 11.9 296 42-358 61-408 (432)
393 KOG2040 Glycine dehydrogenase 99.0 3.4E-07 7.3E-12 82.0 22.2 270 44-347 169-478 (1001)
394 KOG2790 Phosphoserine aminotra 98.2 0.00017 3.7E-09 58.7 16.5 318 4-352 7-368 (370)
395 PLN02994 1-aminocyclopropane-1 97.0 0.0013 2.9E-08 49.9 4.6 55 34-89 88-152 (153)
396 KOG0630 Predicted pyridoxal-de 93.4 0.65 1.4E-05 41.6 8.8 128 81-217 234-371 (838)
397 COG1435 Tdk Thymidine kinase [ 83.8 18 0.00038 28.8 9.3 105 58-177 13-117 (201)
398 smart00642 Aamy Alpha-amylase 83.3 5.4 0.00012 30.9 6.5 58 117-178 17-91 (166)
399 COG2870 RfaE ADP-heptose synth 80.4 11 0.00024 33.3 7.8 85 79-176 92-177 (467)
400 COG2102 Predicted ATPases of P 72.4 33 0.00071 27.8 7.9 154 56-237 4-175 (223)
401 PF00265 TK: Thymidine kinase; 71.8 19 0.00041 28.2 6.5 98 60-178 12-111 (176)
402 cd04915 ACT_AK-Ectoine_2 ACT d 70.9 16 0.00035 23.0 5.0 46 303-350 17-64 (66)
403 cd00951 KDGDH 5-dehydro-4-deox 70.9 11 0.00023 32.4 5.4 61 109-175 11-74 (289)
404 PRK12595 bifunctional 3-deoxy- 70.3 32 0.0007 30.5 8.3 107 116-226 236-346 (360)
405 PRK03620 5-dehydro-4-deoxygluc 69.3 12 0.00027 32.2 5.5 70 100-175 8-81 (303)
406 TIGR03249 KdgD 5-dehydro-4-deo 69.2 13 0.00028 32.0 5.6 63 101-169 7-70 (296)
407 PRK04296 thymidine kinase; Pro 68.7 57 0.0012 25.8 9.7 96 65-177 18-113 (190)
408 PLN02417 dihydrodipicolinate s 67.9 13 0.00029 31.6 5.4 62 109-176 12-76 (280)
409 TIGR02313 HpaI-NOT-DapA 2,4-di 67.2 15 0.00033 31.5 5.6 60 109-174 11-73 (294)
410 TIGR00683 nanA N-acetylneurami 66.5 16 0.00035 31.3 5.6 62 109-176 11-76 (290)
411 cd04920 ACT_AKiii-DAPDC_2 ACT 66.5 17 0.00036 22.7 4.4 45 304-350 17-61 (63)
412 COG0329 DapA Dihydrodipicolina 66.4 14 0.0003 31.9 5.2 72 99-176 4-79 (299)
413 PRK03170 dihydrodipicolinate s 63.6 18 0.0004 31.0 5.5 60 109-174 12-74 (292)
414 PRK10785 maltodextrin glucosid 63.6 11 0.00025 36.0 4.6 58 117-178 177-247 (598)
415 PF04002 RadC: RadC-like JAB d 63.4 21 0.00045 26.0 5.0 47 117-173 52-103 (123)
416 cd04937 ACT_AKi-DapG-BS_2 ACT 62.7 22 0.00049 22.1 4.5 46 303-350 17-62 (64)
417 COG1023 Gnd Predicted 6-phosph 62.5 56 0.0012 27.0 7.4 97 117-232 49-150 (300)
418 COG0352 ThiE Thiamine monophos 62.0 28 0.0006 28.2 5.8 50 118-178 24-73 (211)
419 PF10087 DUF2325: Uncharacteri 61.9 20 0.00044 24.7 4.5 62 98-177 19-82 (97)
420 cd04918 ACT_AK1-AT_2 ACT domai 61.5 27 0.00058 21.9 4.7 46 303-350 16-63 (65)
421 TIGR00715 precor6x_red precorr 61.1 46 0.00099 28.0 7.2 94 57-174 3-96 (256)
422 cd00950 DHDPS Dihydrodipicolin 60.7 22 0.00048 30.3 5.5 55 109-169 11-65 (284)
423 TIGR03586 PseI pseudaminic aci 60.3 70 0.0015 28.0 8.4 111 104-228 135-248 (327)
424 COG1105 FruK Fructose-1-phosph 60.2 22 0.00047 30.6 5.1 59 114-178 109-167 (310)
425 PRK09441 cytoplasmic alpha-amy 60.1 23 0.0005 32.9 5.8 23 156-178 80-102 (479)
426 PRK04147 N-acetylneuraminate l 59.8 26 0.00057 30.0 5.8 71 100-175 4-78 (293)
427 cd00954 NAL N-Acetylneuraminic 59.7 28 0.0006 29.8 5.9 61 109-175 11-75 (288)
428 PF05368 NmrA: NmrA-like famil 59.7 36 0.00077 27.8 6.4 60 98-175 40-99 (233)
429 COG0552 FtsY Signal recognitio 58.9 97 0.0021 27.1 8.7 100 66-178 155-268 (340)
430 cd00408 DHDPS-like Dihydrodipi 58.8 26 0.00057 29.8 5.6 62 109-176 8-72 (281)
431 PF06153 DUF970: Protein of un 58.5 44 0.00095 23.7 5.6 49 302-352 11-66 (109)
432 COG0616 SppA Periplasmic serin 57.8 50 0.0011 28.7 7.1 100 116-230 80-180 (317)
433 TIGR00674 dapA dihydrodipicoli 56.9 31 0.00067 29.5 5.7 61 109-175 9-72 (285)
434 PRK11633 cell division protein 56.8 57 0.0012 26.7 6.8 48 302-349 161-213 (226)
435 smart00481 POLIIIAc DNA polyme 56.8 40 0.00088 21.1 5.0 48 113-175 12-59 (67)
436 COG1184 GCD2 Translation initi 56.6 1.3E+02 0.0028 25.9 9.0 104 55-179 121-231 (301)
437 PRK13602 putative ribosomal pr 55.9 54 0.0012 21.8 5.5 45 118-177 16-60 (82)
438 KOG1251 Serine racemase [Signa 55.1 86 0.0019 26.0 7.3 78 57-149 77-154 (323)
439 TIGR00097 HMP-P_kinase phospho 53.7 30 0.00066 28.9 5.1 28 151-178 74-102 (254)
440 TIGR01305 GMP_reduct_1 guanosi 53.1 59 0.0013 28.4 6.6 76 116-204 159-241 (343)
441 PF00701 DHDPS: Dihydrodipicol 53.0 20 0.00044 30.6 4.0 62 109-176 12-76 (289)
442 PF07131 DUF1382: Protein of u 52.8 31 0.00068 21.1 3.5 29 326-354 24-52 (61)
443 PF02603 Hpr_kinase_N: HPr Ser 52.5 21 0.00046 26.1 3.5 33 135-177 80-112 (127)
444 cd00984 DnaB_C DnaB helicase C 51.7 30 0.00064 28.5 4.7 60 114-176 104-169 (242)
445 cd00308 enolase_like Enolase-s 51.0 47 0.001 27.2 5.7 82 109-210 98-181 (229)
446 PF03460 NIR_SIR_ferr: Nitrite 50.9 15 0.00033 23.3 2.2 21 149-170 17-37 (69)
447 TIGR02403 trehalose_treC alpha 50.6 34 0.00074 32.4 5.3 58 117-178 25-96 (543)
448 COG1504 Uncharacterized conser 50.4 53 0.0011 23.2 4.7 51 112-176 45-95 (121)
449 PF13872 AAA_34: P-loop contai 50.0 19 0.00041 30.8 3.1 29 157-185 159-188 (303)
450 cd04917 ACT_AKiii-LysC-EC_2 AC 49.7 54 0.0012 20.2 4.7 45 304-350 18-62 (64)
451 TIGR03590 PseG pseudaminic aci 49.6 81 0.0017 26.8 7.1 41 98-145 49-89 (279)
452 PRK13601 putative L7Ae-like ri 49.5 77 0.0017 21.2 5.5 44 119-177 14-57 (82)
453 KOG2741 Dimeric dihydrodiol de 49.4 34 0.00073 29.8 4.6 74 85-178 57-130 (351)
454 cd04923 ACT_AK-LysC-DapG-like_ 49.2 41 0.0009 20.3 4.1 45 304-350 17-61 (63)
455 cd04922 ACT_AKi-HSDH-ThrA_2 AC 49.2 58 0.0013 20.0 4.8 46 303-350 17-64 (66)
456 cd07018 S49_SppA_67K_type Sign 47.8 47 0.001 27.1 5.2 55 116-175 29-83 (222)
457 TIGR00789 flhB_rel flhB C-term 47.5 19 0.0004 24.1 2.2 20 159-178 29-48 (82)
458 CHL00200 trpA tryptophan synth 47.0 1.8E+02 0.0038 24.6 10.3 86 79-176 121-208 (263)
459 PF08543 Phos_pyr_kin: Phospho 46.9 55 0.0012 27.2 5.6 36 135-178 59-94 (246)
460 cd00952 CHBPH_aldolase Trans-o 46.7 44 0.00095 29.0 5.1 58 113-176 23-83 (309)
461 cd04936 ACT_AKii-LysC-BS-like_ 46.7 50 0.0011 20.0 4.2 45 304-350 17-61 (63)
462 PF01248 Ribosomal_L7Ae: Ribos 46.5 89 0.0019 21.2 5.7 45 118-177 20-65 (95)
463 TIGR01361 DAHP_synth_Bsub phos 46.5 1.4E+02 0.003 25.2 7.8 89 117-209 144-238 (260)
464 PLN02476 O-methyltransferase 46.3 1.5E+02 0.0033 25.2 8.0 127 35-182 101-233 (278)
465 PRK12313 glycogen branching en 46.1 45 0.00098 32.3 5.5 45 135-179 183-242 (633)
466 COG0826 Collagenase and relate 45.8 60 0.0013 28.7 5.7 51 117-175 15-67 (347)
467 PRK12412 pyridoxal kinase; Rev 45.3 48 0.001 28.0 5.0 28 151-178 79-107 (268)
468 KOG3974 Predicted sugar kinase 45.3 99 0.0021 25.9 6.4 49 117-178 91-140 (306)
469 PRK01018 50S ribosomal protein 45.2 86 0.0019 21.8 5.4 43 119-176 22-64 (99)
470 PF00128 Alpha-amylase: Alpha 44.6 23 0.00049 30.3 3.1 23 156-178 51-73 (316)
471 cd03320 OSBS o-Succinylbenzoat 44.6 93 0.002 26.2 6.6 80 109-210 131-212 (263)
472 PF06877 RraB: Regulator of ri 44.5 1E+02 0.0022 21.5 5.8 62 292-355 28-97 (104)
473 cd05560 Xcc1710_like Xcc1710_l 43.8 1E+02 0.0023 21.8 5.8 49 115-178 39-87 (109)
474 COG0157 NadC Nicotinate-nucleo 43.5 1.1E+02 0.0024 25.9 6.6 70 106-203 191-261 (280)
475 PRK06683 hypothetical protein; 43.4 98 0.0021 20.6 5.5 44 119-177 17-60 (82)
476 PRK10927 essential cell divisi 43.1 99 0.0021 26.6 6.3 47 302-348 259-306 (319)
477 cd01017 AdcA Metal binding pro 43.1 58 0.0013 27.7 5.3 78 77-175 170-248 (282)
478 PF13840 ACT_7: ACT domain ; P 43.0 28 0.0006 21.9 2.5 43 303-348 23-65 (65)
479 PF05036 SPOR: Sporulation rel 42.7 53 0.0011 20.9 4.0 46 302-347 16-65 (76)
480 cd06568 GH20_SpHex_like A subg 41.9 29 0.00063 30.4 3.2 28 149-176 67-94 (329)
481 COG3870 Uncharacterized protei 41.8 1.2E+02 0.0025 21.1 6.8 53 302-354 11-68 (109)
482 PF02571 CbiJ: Precorrin-6x re 41.7 1.1E+02 0.0024 25.6 6.4 94 57-174 3-97 (249)
483 PRK10933 trehalose-6-phosphate 41.7 57 0.0012 31.0 5.4 58 117-178 31-102 (551)
484 PRK02714 O-succinylbenzoate sy 41.6 88 0.0019 27.3 6.2 84 110-210 168-253 (320)
485 cd06563 GH20_chitobiase-like T 41.5 28 0.00061 30.9 3.2 28 149-176 78-105 (357)
486 cd04919 ACT_AK-Hom3_2 ACT doma 41.0 86 0.0019 19.3 4.8 46 303-350 17-64 (66)
487 PF10678 DUF2492: Protein of u 40.5 84 0.0018 20.8 4.4 47 40-87 22-68 (78)
488 smart00839 ELFV_dehydrog Gluta 40.3 1.3E+02 0.0028 21.1 5.8 49 307-355 40-97 (102)
489 COG0075 Serine-pyruvate aminot 40.1 1.9E+02 0.0041 26.0 7.9 141 4-155 27-178 (383)
490 cd02742 GH20_hexosaminidase Be 40.1 32 0.00069 29.7 3.2 27 150-176 65-91 (303)
491 PRK10949 protease 4; Provision 39.4 51 0.0011 31.7 4.7 57 114-175 345-401 (618)
492 PF13481 AAA_25: AAA domain; P 39.2 87 0.0019 24.6 5.5 52 118-175 129-184 (193)
493 TIGR00334 5S_RNA_mat_M5 ribonu 39.1 57 0.0012 25.4 4.0 44 117-177 13-56 (174)
494 COG2515 Acd 1-aminocyclopropan 38.9 2.6E+02 0.0056 24.2 10.8 121 40-168 49-177 (323)
495 PRK05096 guanosine 5'-monophos 38.8 1.3E+02 0.0027 26.5 6.4 73 117-203 161-241 (346)
496 TIGR03853 matur_matur probable 38.8 96 0.0021 20.4 4.4 47 40-87 20-66 (77)
497 cd05126 Mth938 Mth938 domain. 38.5 1.4E+02 0.0029 21.6 5.7 49 115-178 45-94 (117)
498 PRK10416 signal recognition pa 38.4 2.7E+02 0.0059 24.3 10.0 43 135-178 195-243 (318)
499 cd03315 MLE_like Muconate lact 38.2 82 0.0018 26.5 5.4 83 108-210 132-216 (265)
500 cd03318 MLE Muconate Lactonizi 38.2 77 0.0017 28.2 5.5 48 157-210 226-275 (365)
No 1
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.8e-52 Score=326.26 Aligned_cols=345 Identities=63% Similarity=0.966 Sum_probs=323.3
Q ss_pred cccccccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEE
Q 018240 3 TRTVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVI 82 (359)
Q Consensus 3 ~~~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl 82 (359)
++.+||+||+.+.|+.+++++|.++..++..|+.++...+||+++|+++|.+.++|++|||++++.+++..+.++|.+|+
T Consensus 21 ~~~vDLRSDTvT~PTdeMr~am~eA~vgDdVyGeD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~~rg~eii 100 (384)
T KOG1368|consen 21 HRSVDLRSDTVTVPTDEMRRAMAEASVGDDVYGEDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCHQRGSEII 100 (384)
T ss_pred eeccccccccccCChHHHHHHHhhcccCcccccCCccHHHHHHHHHHHhCccceeeecccccccHHHHHHHhcCCCceEE
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHH
Q 018240 83 LGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSV 162 (359)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i 162 (359)
+.+.+|...|+++++..+.|+.+..+...+++.++++++++.+.....+-+.+.+++|+++|+++|.+|.++|.|+++++
T Consensus 101 ~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v 180 (384)
T KOG1368|consen 101 VGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRV 180 (384)
T ss_pred eccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHH
Confidence 99999999999999999999999999888999999999999999755567778999999999999988999999999999
Q ss_pred HHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHHhhCCCcchhH
Q 018240 163 GEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVG 242 (359)
Q Consensus 163 ~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (359)
.++|+++|+.+++|+|+.|.+....+.+...+...+|.+++.+||.+|.|.|++++++++++++.+.++...|+++++++
T Consensus 181 ~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVGSViVG~k~FI~kA~~~RKalGGGmRQsG 260 (384)
T KOG1368|consen 181 KALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVGSVIVGSKDFIDKARHFRKALGGGMRQSG 260 (384)
T ss_pred HHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCCcccEEEccHHHHHHHHHHHHHhcCchhHHH
Confidence 99999999999999999999998889999999889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC
Q 018240 243 VLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES 322 (359)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~ 322 (359)
.++++++.++++-.. .++..++++..|.+.+...+++.+..+....+++.+.+.. ..++++++++.+.++||.+..+.
T Consensus 261 vLaaaaLval~~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q-~~~~~~~l~~~~~k~gi~lm~~~ 338 (384)
T KOG1368|consen 261 VLAAAALVALDENVP-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQ-ARLTAEELCKFLEKNGILLMGGA 338 (384)
T ss_pred HHHHHHHHHhhcchH-HHHHHHHHHHHHHHHhccccceeeecchhhcceeeeeccc-ccCCHHHHHHHHHHCCeEEeecc
Confidence 999999999988777 7778889999999999988778886666789999988865 46899999999999999999998
Q ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 323 STRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 323 ~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
...+|+.+++..++++++.++..+.+.
T Consensus 339 s~r~Rivlh~Qvt~~~ve~~~~~~~k~ 365 (384)
T KOG1368|consen 339 SRRIRIVLHHQVTDEDVEYVKSVLSKK 365 (384)
T ss_pred ccceEEEEEEecCHHHHHHHHHHHHHH
Confidence 889999999999999999999999543
No 2
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-44 Score=296.86 Aligned_cols=338 Identities=41% Similarity=0.617 Sum_probs=295.0
Q ss_pred cccccCCCCCChHHHHHHHHHcCC-CCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEe
Q 018240 5 TVDLRSDTVTKPTEAMRAAMASAE-VDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVIL 83 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~ 83 (359)
++||+|||..+|+|+++++|.++. .+...|+.++...++++.+++.++....+|++|||+||..+|..++ +|+..|++
T Consensus 1 ~~~f~SDn~~g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~-~~~~~vi~ 79 (342)
T COG2008 1 MIDFRSDNVAGPTPEMREALAAANAVGDDVYGEDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHC-QPGESVIC 79 (342)
T ss_pred CCccccCccCCCCHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhc-CCCCeEEE
Confidence 589999999999999999999988 5688999999999999999999999878999999999999999999 69999999
Q ss_pred cCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHH
Q 018240 84 GDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVG 163 (359)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~ 163 (359)
...+|...+++|++..+.+...+.+....+|.+++++++..+.. ++.+...+.+++++++++ ..|.+||.+++++|.
T Consensus 80 ~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~--~d~~~~~~~~~~~e~~~t-e~GtVy~l~el~~i~ 156 (342)
T COG2008 80 HETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRP--DDIHHAPTPLAVLENTAT-EGGTVYPLDELEAIS 156 (342)
T ss_pred eccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcC--CCcccCCCceEEEeeccC-CCceecCHHHHHHHH
Confidence 99999999999988888887777777778999999999999985 443445666666667666 679999999999999
Q ss_pred HHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHHhhCCCcchhHH
Q 018240 164 EIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVGV 243 (359)
Q Consensus 164 ~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (359)
++|+++|+.|++|+++.+......+.+...+..++|++++++||.++.|.|++++++.+++++++.+++..|..++...+
T Consensus 157 ~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~ 236 (342)
T COG2008 157 AVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNRDFAKRARRWRKRAGGLMRKARF 236 (342)
T ss_pred HHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCHHHHHHHHHHHHHhcccHhhhhH
Confidence 99999999999999998888888888888888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHhhhHHHH--HHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccC
Q 018240 244 LCAAALVALQENVLVMLDGDHKK--AKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE 321 (359)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~--~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~ 321 (359)
+++.....+++.+. ++...+++ +.+|.+.|.+.||+++..+ ..+|++|+.++. ..++.......+...|+.+.+.
T Consensus 237 laA~~~~~l~~~~~-~~~~~Han~mA~~La~~~~~~~G~~~~~~-~~tN~vf~~l~~-~~i~~l~~~~~~~~~~~~~~~~ 313 (342)
T COG2008 237 LAAQGLYALEDDVW-RLAADHANAMAARLAEGLEAKPGVKLAFP-VETNMVFVRLPE-SAIEALRLAGALFYRGVLIGAH 313 (342)
T ss_pred HHHHHHHHHhccHH-HHHHHHHHHHHHHHHHhhhhcCCceeccC-CcccEEEEECCh-HHHHHHHhhchhheeeeeccCC
Confidence 99999999988776 44555555 9999999998889999654 799999999987 2334444555555666665444
Q ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 322 SSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 322 ~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
+ ..+|+.+++..+++++++++..+++++
T Consensus 314 ~-~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 314 G-EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred C-ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 3 579999999999999999999998764
No 3
>PLN02721 threonine aldolase
Probab=100.00 E-value=1.9e-42 Score=305.30 Aligned_cols=350 Identities=81% Similarity=1.195 Sum_probs=276.4
Q ss_pred CccccccccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCe
Q 018240 1 MVTRTVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSE 80 (359)
Q Consensus 1 ~~~~~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~ 80 (359)
|..++++|+++++..|.+.+.+++.+.......+.+++...++|+.++++++.+..+++++|++++..++..++..+||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~~~~~gd~ 82 (353)
T PLN02721 3 MVSRVVDLRSDTVTKPTDAMRAAMANAEVDDDVLGYDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVHCDVRGSE 82 (353)
T ss_pred hhhhhhhhhcccccCCCHHHHHHHHhccCCCcccCCCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHHccCCCCe
Confidence 56789999999999999999999987423333455677789999999999999888999999999887777766338999
Q ss_pred EEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHH
Q 018240 81 VILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTD 160 (359)
Q Consensus 81 vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~ 160 (359)
|++++++|++.++.+..+...|++++.++.++++.+|++.+++.+++.. ..+.+++++|+++++++||||.+++.++++
T Consensus 83 Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~-~~~~~~~~~v~l~~~~~np~G~~~~~~~l~ 161 (353)
T PLN02721 83 VILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKG-DDHFPTTRLICLENTHANCGGRCLSVEYTD 161 (353)
T ss_pred EEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhcc-CCCCCcceEEEEeccccccCCccccHHHHH
Confidence 9999999988776322467789999999877788899999999997421 111147889999999999999999999999
Q ss_pred HHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHHhhCCCcch
Q 018240 161 SVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQ 240 (359)
Q Consensus 161 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (359)
+|.++|+++|+++|+|++|.++.....+.....+..++|.++.|+||+++++.|++++.++++++.+.......+.....
T Consensus 162 ~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
T PLN02721 162 KVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGSKSFIRKAKRLRKTLGGGMRQ 241 (353)
T ss_pred HHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecCHHHHHhHHHHHHhcCCCeeh
Confidence 99999999999999999987665332344444444578888889999999887777888999988887776665554443
Q ss_pred hHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceecc
Q 018240 241 VGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMP 320 (359)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~ 320 (359)
.+..++++..+++...+ ..++..++++++.+.|++++++.+...+..++++|++++.....+...+.++|.++||.+.+
T Consensus 242 ~~~~~~~~~~~l~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~ 320 (353)
T PLN02721 242 VGVLAAAALVALQENVP-KLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITAEKLCKSLEEHGVLLMP 320 (353)
T ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccHHHHHHHHHhCCcEEec
Confidence 44444555566666555 44455667889999999987886522234677888888642113678999999999999999
Q ss_pred CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 321 ESSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 321 ~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
++.+++|+++++.++++++++++++|++++..
T Consensus 321 ~~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 321 GNSSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred CCCceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 99899999998889999999999999987653
No 4
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.8e-40 Score=287.07 Aligned_cols=329 Identities=26% Similarity=0.284 Sum_probs=259.9
Q ss_pred ccccccCCCCCChH-HHHHHHHHcCCCCCC-ccCCChHHHHHHHHHHHHhCCC--------C-eEEcCCchHHHHHHHHH
Q 018240 4 RTVDLRSDTVTKPT-EAMRAAMASAEVDDD-VLMHDPTAFRLETEMAKVMGKE--------A-GLFVPSGTMGNLISVLV 72 (359)
Q Consensus 4 ~~id~~~~~~~~~~-~~~~~a~~~~~~~~~-~~~~~~~~~~l~~~la~~~~~~--------~-~~~~~~gt~a~~~~l~~ 72 (359)
.+|||..+.+..+. +.+.+++.++..... .|....+..+||+++++++... . .++++++++|+..++.+
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a 108 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLA 108 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHH
Confidence 57999999987776 568888777555432 5668899999999999887543 2 25555666788888888
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecC---CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC
Q 018240 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN---QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC 149 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p 149 (359)
++ .+||+|++++|.|.+ |. ....+.|.+++.++.. .++.+|+++|++.++ +++++|++ +.+|||
T Consensus 109 ~~-~pGDeVlip~P~Y~~-y~--~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~--------~ktk~i~l-n~P~NP 175 (393)
T COG0436 109 LL-NPGDEVLIPDPGYPS-YE--AAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAIT--------PKTKAIIL-NSPNNP 175 (393)
T ss_pred hc-CCCCEEEEeCCCCcC-HH--HHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcC--------ccceEEEE-eCCCCC
Confidence 88 599999999999666 54 4588889999999753 479999999999999 89999999 667779
Q ss_pred CceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcC---chhHhhhcCcc-EEEE-eccccCCCcee--eEEecC-H
Q 018240 150 GGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALG---VPVRRLVQAAD-SASV-CLSKGLGAPVG--SVIVGS-K 221 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~---~~~~~~~~~~d-~~~~-s~~K~~g~~~g--g~~~~~-~ 221 (359)
||.+++.+++++|.++|++||++||.||+|.- +.+.+ .+..++....| .+++ |+||.++++++ ||++++ +
T Consensus 176 TGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~--l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~ 253 (393)
T COG0436 176 TGAVYSKEELKAIVELAREHDIIIISDEIYEE--LVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPE 253 (393)
T ss_pred cCcCCCHHHHHHHHHHHHHcCeEEEEehhhhh--cccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChH
Confidence 99999999999999999999999999999643 33333 33444432223 4444 99999998766 999998 8
Q ss_pred HHHHHHHHHHHhhCCCcchhHHHHHHHHHHHH-----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEe
Q 018240 222 EFIKKARRLRKTLGGGMRQVGVLCAAALVALQ-----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEI 296 (359)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~ 296 (359)
++++.+..+......+. +...+.++..+|+ ...+..++.+.++++.+.+.|.+.+|+.+..++.+++++|+.+
T Consensus 254 ~l~~~~~~~~~~~~~~~--~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i 331 (393)
T COG0436 254 ELIAALRKLKSYLTSCA--PTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKI 331 (393)
T ss_pred HHHHHHHHHHHhcccCC--CHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeec
Confidence 89898887777776665 4456666666664 2444455779999999999999997899876567899999999
Q ss_pred ccchHHHHHHHHHHH-HhcCceeccC-------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 297 TEDSKLYAACLLKKL-EEHGVLVMPE-------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 297 ~~~~~~~~~~~~~~l-~~~gi~~~~~-------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+.. .+..+|+.+| .++||.++|| +.+++|+++ ..+.++++++++++.++++.+
T Consensus 332 ~~~--~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~--~~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 332 PEL--LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSL--ATSEETLEEALRRLARFLAEY 392 (393)
T ss_pred CCC--CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEE--ecCHHHHHHHHHHHHHHHHhc
Confidence 863 5888999998 8889999886 346899999 577799999999999988764
No 5
>PRK10534 L-threonine aldolase; Provisional
Probab=100.00 E-value=2.1e-38 Score=276.82 Aligned_cols=332 Identities=44% Similarity=0.717 Sum_probs=256.6
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEec
Q 018240 5 TVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILG 84 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~ 84 (359)
+|||+|++.++|+|.+.+++.+...+...|++.+...+|++.+++++|.+..+++++|++++..++.+++ .+|++|+++
T Consensus 1 ~~~~~~~~~~~p~~~~~~a~~~~~~~~~~Y~~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~-~~gd~vi~~ 79 (333)
T PRK10534 1 MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHC-ERGEEYIVG 79 (333)
T ss_pred CcccccccCCCCCHHHHHHHHhccCCCcccCCCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhc-CCCCeeEEe
Confidence 5899999999999999999988666666788889999999999999999988999999999998888887 599999999
Q ss_pred CCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHH
Q 018240 85 DNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGE 164 (359)
Q Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~ 164 (359)
.++|...+..+......+++++.++.+.++.+|+++|++.++... .+..++++|+++++ ++|.+++.+++++|.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~--~~~~~~~lv~l~np---~~G~v~~~~~l~~i~~ 154 (333)
T PRK10534 80 QAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDD--IHFARTRLLSLENT---HNGKVLPREYLKQAWE 154 (333)
T ss_pred chhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccC--cCcccceEEEEecC---CCCeecCHHHHHHHHH
Confidence 888755454111122334677777777788999999999986210 00016889999643 4699999999999999
Q ss_pred HHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHHhhCCCcchhHHH
Q 018240 165 IAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVL 244 (359)
Q Consensus 165 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (359)
+|++|++++++||+|.++.....+.....+....|.++.|+||.++++.|+++++++++++.++.+...++..++.....
T Consensus 155 ~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~~G~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 234 (333)
T PRK10534 155 FTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRARRWRKMTGGGMRQAGIL 234 (333)
T ss_pred HHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCcccceEEcCHHHHHHHHHHHHHhCCchhhHHHH
Confidence 99999999999999875443222333333333456666799999998777788899999999988877666555555566
Q ss_pred HHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCc
Q 018240 245 CAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESST 324 (359)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~ 324 (359)
++++..++++..+ .+++..+.++++.+.|+++ |+++. + +.++|++++++. .+..++.+.|.++||.+.++.
T Consensus 235 ~a~~~~~l~~~~~-~~~~~~~~r~~l~~~L~~~-g~~~~-~-~~~nfv~~~~~~---~~~~~~~~~l~~~gi~v~~~~-- 305 (333)
T PRK10534 235 AAAGLYALKHNVA-RLQEDHDNAAWLAEQLREA-GADVM-R-QDTNMLFVRVGE---EQAAALGEYMRERNVLINASP-- 305 (333)
T ss_pred HHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHhC-CCccC-C-CCceEEEEECCc---hhHHHHHHHHHHcCeeecCCc--
Confidence 6666667765443 4455556778999999998 88874 3 379999999874 256788889999999998764
Q ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 325 RVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 325 ~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.+|++.+..++++++++++++|++++.
T Consensus 306 ~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 306 IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 589987667899999999999987654
No 6
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=100.00 E-value=2e-36 Score=265.45 Aligned_cols=333 Identities=43% Similarity=0.619 Sum_probs=252.7
Q ss_pred cccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCC
Q 018240 7 DLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDN 86 (359)
Q Consensus 7 d~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~ 86 (359)
||+++++.+|+|.+++++.+.......|+..+...++++.+++++|.+..++++||++++..++..++ ++|+.|+++.+
T Consensus 1 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~-~~gd~v~~~~~ 79 (338)
T cd06502 1 DFRSDTVTGPTPEMLEAMAAANVGDDVYGEDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHT-QPGGSVICHET 79 (338)
T ss_pred CcccccCCCCCHHHHHHHHhcccCCcccCCCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhc-CCCCeEEEecC
Confidence 79999999999999999988654444566678889999999999995567899999999988888887 59999999999
Q ss_pred CcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHH
Q 018240 87 SHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIA 166 (359)
Q Consensus 87 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~ 166 (359)
+|.+.+.........|++++.++.+. +.+|++++++.+++..+ .+.+++++|++++++| | |..++.+++++|+++|
T Consensus 80 ~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~-~~~~~~~~v~l~~p~n-~-g~~~~~~~l~~i~~~~ 155 (338)
T cd06502 80 AHIYTDEAGAPEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDD-IHFPPPSLVSLENTTE-G-GTVYPLDELKAISALA 155 (338)
T ss_pred cceeeecCCcHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCC-CcCCcceEEEEEeecC-C-ccccCHHHHHHHHHHH
Confidence 99887652112445788999887654 77899999999974211 1113688999977654 7 5566889999999999
Q ss_pred HHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHH
Q 018240 167 KKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCA 246 (359)
Q Consensus 167 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (359)
+++|+++|+|++|.++.....+.....+..++|+++.|+||+||+|.|++++.++++++.++.....++++.+.++..++
T Consensus 156 ~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (338)
T cd06502 156 KENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNRDFIARARRRRKQAGGGMRQSGFLAA 235 (338)
T ss_pred HHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCHHHHHHHHHHHHHhCCChhhHHHHHH
Confidence 99999999999986554332333334444578888889999999887777778999999988776666555555666666
Q ss_pred HHHHHHHHh-HHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHH---hcCceeccCC
Q 018240 247 AALVALQEN-VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLE---EHGVLVMPES 322 (359)
Q Consensus 247 ~~~~~l~~~-~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~gi~~~~~~ 322 (359)
++..+++.. ..+..++..++++++.+.|+++ ++.+. +..++++.+.++.. ......+.+.+. ++|+.+.+.+
T Consensus 236 a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~--~~~~~~~~v~~~~~-~~~~~~l~~~l~~~~~~gi~~~~~~ 311 (338)
T cd06502 236 AGLAALENDLWLRRLRHDHEMARRLAEALEEL-GGLES--EVQTNIVLLDPVEA-NAVFVELSKEAIERRGEGVLFYAWG 311 (338)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CCCcc--cccCCeEEEecCCc-cHHHHHHHHHHHHhhhCCEEEEecC
Confidence 667777541 2235677778889999999998 66543 34678888877531 123334444443 6899987766
Q ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018240 323 STRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 323 ~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
..++|++++..+++++++++++++++
T Consensus 312 ~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 312 EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 68999999988999999999999864
No 7
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=6e-35 Score=250.44 Aligned_cols=326 Identities=22% Similarity=0.260 Sum_probs=270.6
Q ss_pred cccccccCCCCCChH--HHHHHHHHcCCCC--------CCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSDTVTKPT--EAMRAAMASAEVD--------DDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~~~~~~--~~~~~a~~~~~~~--------~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~ 72 (359)
.+++||.|+++.+-. |.+++++.++... ...+|..+.+.+||+++++++|.+.+++++||-.||..++.+
T Consensus 39 ~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i~~ 118 (388)
T COG0156 39 RKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEAALLFSSGFVANLGLLSA 118 (388)
T ss_pred ceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHHHH
Confidence 457999999887554 7777766654322 224677889999999999999999999999999999999999
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018240 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
++. ++|.|+.+...|.+.+. + +++.+++.+.+.++ |++.|++.+++..... .+.++|+++...+ ..|.
T Consensus 119 l~~-~~dli~~D~lnHASiid-G--~rls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~--~~~~~IvtegVfS-MdGd 186 (388)
T COG0156 119 LLK-KGDLIFSDELNHASIID-G--IRLSRAEVRRFKHN-----DLDHLEALLEEARENG--ARRKLIVTEGVFS-MDGD 186 (388)
T ss_pred hcC-CCcEEEEechhhhhHHH-H--HHhCCCcEEEecCC-----CHHHHHHHHHhhhccC--CCceEEEEecccc-CCCC
Confidence 994 89999999999999887 6 78999999999887 9999999998633111 1568999999999 6788
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh----cCccEEEEeccccCCCceeeEEecCHHHHHHHH
Q 018240 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV----QAADSASVCLSKGLGAPVGSVIVGSKEFIKKAR 228 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~----~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~ 228 (359)
+.| +.+|++++++|++++++||+|+.|..+..|....+.. ...|+++.|++|.|| ..||++.++..+.+.++
T Consensus 187 iAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlG-s~Gg~v~g~~~~~d~L~ 262 (388)
T COG0156 187 IAP---LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALG-SSGGYIAGSAALIDYLR 262 (388)
T ss_pred cCC---HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhc-ccCceeeCcHHHHHHHH
Confidence 887 8999999999999999999999999987777666443 234788889999999 49999999999999998
Q ss_pred HHHHhhCCCcchhHHHHHHHHHHHHHhHH--HHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHH
Q 018240 229 RLRKTLGGGMRQVGVLCAAALVALQENVL--VMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAAC 306 (359)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (359)
.....+-.+++.++..++++..+++...+ +++++..++..++++.++.. ++.+. +..++++.+.+.++ ..+.+
T Consensus 263 ~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~-~~~~~--~s~s~I~pv~~gd~--~~a~~ 337 (388)
T COG0156 263 NRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL-GLVLL--PSESPIIPVILGDE--ERALE 337 (388)
T ss_pred HhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCccC--CCCCCeeeeEeCCH--HHHHH
Confidence 88787888888888888888888754432 37778888889998777776 77653 55888888888763 46888
Q ss_pred HHHHHHhcCcee-------ccCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 307 LLKKLEEHGVLV-------MPESSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 307 ~~~~l~~~gi~~-------~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
+...|.+.||.+ +|.+...+|++++..++++|++.+++++.++
T Consensus 338 ~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 338 ASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred HHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 999998889988 5567788999999999999999999999764
No 8
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=9.3e-35 Score=259.38 Aligned_cols=328 Identities=19% Similarity=0.155 Sum_probs=242.2
Q ss_pred ccccccCCCCCCh-HHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHhC----C--C--CeEE-cCCchHHHHHHHHH
Q 018240 4 RTVDLRSDTVTKP-TEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVMG----K--E--AGLF-VPSGTMGNLISVLV 72 (359)
Q Consensus 4 ~~id~~~~~~~~~-~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~----~--~--~~~~-~~~gt~a~~~~l~~ 72 (359)
..|||..+.+..+ .+.+.+++.+.... ...|+..++..+|++.++++++ . + ..++ ++|+++++..++..
T Consensus 55 ~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~ 134 (413)
T PLN00175 55 GAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILG 134 (413)
T ss_pred CeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHH
Confidence 5689998877655 36777777664432 3468778889999999998874 2 1 2354 44556777777777
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018240 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
++ ++||.|++++|+|.. +. ..++..|++++.++.+ +++.+|+++|++.++ +++++|++ +.++||||
T Consensus 135 l~-~~gd~Vlv~~P~y~~-~~--~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~--------~~~k~i~i-~~p~NPtG 201 (413)
T PLN00175 135 LI-NPGDEVILFAPFYDS-YE--ATLSMAGAKIKTVTLRPPDFAVPEDELKAAFT--------SKTRAILI-NTPHNPTG 201 (413)
T ss_pred hC-CCCCEEEEeCCCchh-HH--HHHHHcCCEEEEEECCcccCCCCHHHHHHhcC--------cCceEEEe-cCCCCCCC
Confidence 77 599999999999765 44 3477889999999765 357889999999998 67899988 45667999
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhc-CccEE-EEeccccCCCcee--eEEecCHHHHHHH
Q 018240 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQ-AADSA-SVCLSKGLGAPVG--SVIVGSKEFIKKA 227 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~d~~-~~s~~K~~g~~~g--g~~~~~~~~~~~~ 227 (359)
.+++.+++++|+++|++|+++||+||+|....+.....+...+.. ...++ +.|+||.|+.|+. ||+++++++++.+
T Consensus 202 ~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l 281 (413)
T PLN00175 202 KMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGV 281 (413)
T ss_pred cCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHHH
Confidence 999999999999999999999999999754433211223333321 12244 4599999986554 9999999999998
Q ss_pred HHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHH-H
Q 018240 228 RRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKL-Y 303 (359)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~ 303 (359)
.........+. +...+.++...++ .+.++.++.+.++++.+.+.|++. |+++. ++.++.++|++++. .+. +
T Consensus 282 ~~~~~~~~~~~--s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~p~g~~f~~~~~~~-~~~~~ 356 (413)
T PLN00175 282 RQAHSFLTFAT--ATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV-GFKVY-PSSGTYFVMVDHTP-FGFEN 356 (413)
T ss_pred HHHHhhccCCC--CHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCeeEEEEEeccc-cCCCC
Confidence 87766555444 3344444555553 445557778889999999999998 88764 45577789998743 122 4
Q ss_pred HHHHHHHH-HhcCceeccCC---------CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 304 AACLLKKL-EEHGVLVMPES---------STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 304 ~~~~~~~l-~~~gi~~~~~~---------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
..++.++| +++||.+.|+. .+++||+++ .+++++++.+++|.++++
T Consensus 357 ~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~--~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 357 DIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFC--KDEETLRAAVERMKTKLK 412 (413)
T ss_pred HHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEc--CCHHHHHHHHHHHHHHHh
Confidence 67888888 57899997652 358999996 589999999999998775
No 9
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3e-34 Score=255.88 Aligned_cols=332 Identities=15% Similarity=0.138 Sum_probs=240.5
Q ss_pred ccccccCCCCC--ChHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHh----CCC----C-eEEcCCchHHHHHHH
Q 018240 4 RTVDLRSDTVT--KPTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVM----GKE----A-GLFVPSGTMGNLISV 70 (359)
Q Consensus 4 ~~id~~~~~~~--~~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~----~~~----~-~~~~~~gt~a~~~~l 70 (359)
..|+|..+.+. .|++.+.+++.+.... ...|+..++..++++.+++++ |.+ . .++++|+++++..++
T Consensus 40 ~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~ 119 (405)
T PRK06207 40 RPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAV 119 (405)
T ss_pred CceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHH
Confidence 56889876654 4557777777664432 234766677888888887776 642 2 355555667777777
Q ss_pred HHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC-----CCCCCCHHHHHHHhcCCCCCccCCceeEEEEecc
Q 018240 71 LVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN-----QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENT 145 (359)
Q Consensus 71 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~ 145 (359)
..++ .+||.|++++|+|+... ..+...|.+++.++.+ .++.+|+++|++.++ .++++|++++|
T Consensus 120 ~~l~-~~Gd~Vlv~~P~y~~~~---~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~--------~~~k~v~l~~P 187 (405)
T PRK06207 120 AATV-ARGDKVAIVQPDYFANR---KLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFK--------AGVRVFLFSNP 187 (405)
T ss_pred HHhc-CCCCEEEEeCCCchhHH---HHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhh--------hcCeEEEECCC
Confidence 7777 69999999999987644 3477888898888654 357789999999988 67888888555
Q ss_pred ccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhcCcc-EEE-EeccccCCCcee--eEEecC
Q 018240 146 HANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQAAD-SAS-VCLSKGLGAPVG--SVIVGS 220 (359)
Q Consensus 146 ~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~~~d-~~~-~s~~K~~g~~~g--g~~~~~ 220 (359)
+||||.+++.+++++|+++|++||++||+||+|....+... ..+...+....+ +++ .|+||.|+.|+. ||++++
T Consensus 188 -~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~ 266 (405)
T PRK06207 188 -NNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGS 266 (405)
T ss_pred -CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcC
Confidence 67999999999999999999999999999999654322111 112222211222 444 499999986643 899999
Q ss_pred HHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEec
Q 018240 221 KEFIKKARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEIT 297 (359)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~ 297 (359)
+++++.+.........+. +.+.+.++...++ .+.++.++++.++++.+.+.|++++++++. ++..++++|++++
T Consensus 267 ~~l~~~~~~~~~~~~~~~--~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~p~gg~fl~~~l~ 343 (405)
T PRK06207 267 PAIIDRMEKLQAIVSLRA--AGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVR-APQAGSYLFPRLP 343 (405)
T ss_pred HHHHHHHHHHHhHhccCC--CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-CCCeeEEEEEeCc
Confidence 999999887766655444 3334444444553 234446666777888899999888777764 3557899999987
Q ss_pred cchHHHHHHHHHHHH-hcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 298 EDSKLYAACLLKKLE-EHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 298 ~~~~~~~~~~~~~l~-~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
. ...+..++.+.|. ++||.+.|+. .+++||+++ .+++++++.+++|.+++++++
T Consensus 344 ~-~~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~--~~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 344 R-LAVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFS--QDHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred c-cCCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Confidence 4 1235778999994 7899998763 468999996 478999999999999987764
No 10
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-34 Score=253.54 Aligned_cols=331 Identities=17% Similarity=0.170 Sum_probs=239.4
Q ss_pred ccccccCCCC-CChHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhCCCC--eEEcCCchHHHHHHHHHhhhhcC
Q 018240 4 RTVDLRSDTV-TKPTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMGKEA--GLFVPSGTMGNLISVLVHCETRG 78 (359)
Q Consensus 4 ~~id~~~~~~-~~~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l~~~~~~~g 78 (359)
++|+|..+.. .+|++.+.+++.+.... ...|....+..++++.+++++|.+. .++++|+++++..++..++ .+|
T Consensus 29 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~-~~g 107 (380)
T PRK06225 29 EMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAFL-SPG 107 (380)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhc-CCC
Confidence 4688886644 45568999998876543 2346666678999999999998864 4677788888888888887 589
Q ss_pred CeEEecCCCcceeeccccccccCCccceeeecCC---CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecC
Q 018240 79 SEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ---DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLS 155 (359)
Q Consensus 79 ~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~ 155 (359)
++|++++|+|.... ..+...|.+++.++.+. ++.+|++.+++.++ +++++++++++ +||||.+++
T Consensus 108 d~vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~--------~~~~~v~l~~p-~NptG~~~~ 175 (380)
T PRK06225 108 DNAVTPDPGYLIID---NFASRFGAEVIEVPIYSEECNYKLTPELVKENMD--------ENTRLIYLIDP-LNPLGSSYT 175 (380)
T ss_pred CEEEEcCCCCcchH---HHHHHhCceEEeeccccccCCccCCHHHHHhhcC--------CCceEEEEeCC-CCCCCcCCC
Confidence 99999999976533 23667888888887532 46789999999888 67889988655 669999999
Q ss_pred hhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee--eEEecCHHHHHHHHHHHHh
Q 018240 156 VEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG--SVIVGSKEFIKKARRLRKT 233 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~ 233 (359)
.+++++|+++|+++|+++|+|++|.. +.........+.....+++.|+||++|.++- ||+++++++++.++.....
T Consensus 176 ~~~~~~i~~~a~~~~~~ii~De~y~~--~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~~~~ 253 (380)
T PRK06225 176 EEEIKEFAEIARDNDAFLLHDCTYRD--FAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIVIN 253 (380)
T ss_pred HHHHHHHHHHHHHCCcEEEEehhHHH--HhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecCHHHHHHHHHHHhc
Confidence 99999999999999999999998642 2111111122221223555599999985432 8899999998887655321
Q ss_pred hCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHH
Q 018240 234 LGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKK 310 (359)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (359)
. ...+...+.++...+ ..+.++..+...++.+.+.+.|++++++.+...+..++++|+.++. .+.+..++.+.
T Consensus 254 -~--~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~l~~~ 329 (380)
T PRK06225 254 -D--LGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISE-AGIDPEDLVEY 329 (380)
T ss_pred -c--cCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccc-ccCCHHHHHHH
Confidence 1 222333333443333 2334434455667778888999887676442234578889998864 23577899999
Q ss_pred HHhcCceeccC-------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 311 LEEHGVLVMPE-------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 311 l~~~gi~~~~~-------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
|.++||.+.++ +..++|++++ .+++++++++++|++++++++.
T Consensus 330 l~~~gi~v~~g~~~~~~~~~~~iR~s~~--~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 330 LLERKIFVRQGTYTSKRFGDRYIRVSFS--IPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred HHHCCEEEcCCcccCcCCCCceEEEEeC--CCHHHHHHHHHHHHHHHHHhhc
Confidence 99999998775 2458999995 5799999999999999998764
No 11
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=100.00 E-value=9.5e-37 Score=255.38 Aligned_cols=278 Identities=47% Similarity=0.663 Sum_probs=233.1
Q ss_pred cccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCC
Q 018240 7 DLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDN 86 (359)
Q Consensus 7 d~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~ 86 (359)
||+||+ |+|++.++|.++..++..|+.++...++++.++++||.+..+++.+||+|+..++..++ ++++.|++..+
T Consensus 1 Df~SD~---~~~~m~~a~~~a~~gd~~Yg~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~-~~~~~vi~~~~ 76 (290)
T PF01212_consen 1 DFRSDT---PTPAMLEAMAAANVGDDAYGEDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHL-RPGESVICADT 76 (290)
T ss_dssp EES-SS---S-HHEEHHHHHTTSB-CCTTSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHH-HTTEEEEEETT
T ss_pred CCCccC---CCHHHHHHHHccccCCcccCCChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHH-hcCCceecccc
Confidence 899999 89999999998888888999999999999999999999999999999999999999999 69999999999
Q ss_pred CcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHH
Q 018240 87 SHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIA 166 (359)
Q Consensus 87 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~ 166 (359)
+|...++.+++..+.|.+++.++..++|.+|+++|++.++.... +..++++|+++++.+.-+|.+++.+++++|.++|
T Consensus 77 aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~--h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a 154 (290)
T PF01212_consen 77 AHIHFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGA--HHPQPAVVSLENTTELAGGTVYSLEELRAISELA 154 (290)
T ss_dssp EHHHHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTG--TSGGEEEEEEESSBTTTTSB---HHHHHHHHHHH
T ss_pred ceeeeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccc--cCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHH
Confidence 99999998877788999999998766699999999999986333 5578999999999986679999999999999999
Q ss_pred HHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHH
Q 018240 167 KKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCA 246 (359)
Q Consensus 167 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (359)
++||+.+++|+++.+......+.+..++..++|++++|++|.+|.|.|++++++++++++....+...++.+...++.++
T Consensus 155 ~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~~~i~~~~~~~k~~gg~~~~~G~~~a 234 (290)
T PF01212_consen 155 REHGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPGGAVLAGNKEFIAKARRQRKRLGGGMRQAGVLAA 234 (290)
T ss_dssp HHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSSEEEEEESHHHHHHHHHHHHHHTHHHHHTTHHHH
T ss_pred HhCceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEcccccccceEEEechHHHHHHHHHHHHhccCeeecceeee
Confidence 99999999999998777766778888888999999999999999999999999999988888888888888877766666
Q ss_pred ------HHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEE
Q 018240 247 ------AALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVY 293 (359)
Q Consensus 247 ------~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~ 293 (359)
.++.+++.+.. ...+..+++++|.+.|+.+ ++.+.. +..++.++
T Consensus 235 ~~~~~~~~l~~l~~~~~-~~~~~~~~A~~La~~l~~~-~~~~~~-~~~tn~~~ 284 (290)
T PF01212_consen 235 AELYQFAALRALELWLE-RARHANAMAKRLAAGLEAL-GGVLPR-PVETNQVF 284 (290)
T ss_dssp HHHHHHHHHCHEECSHH-HHHCHHHHHHCHHHCHHEE-CEEEET-TSS-HHHH
T ss_pred echhhHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHC-CCcccC-CCCCcEEe
Confidence 45555555555 7778888999999999998 666533 34444433
No 12
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.1e-33 Score=253.37 Aligned_cols=338 Identities=16% Similarity=0.130 Sum_probs=241.5
Q ss_pred ccccccCCCCC-----ChHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhCCC--------CeEEcCCchHHHHH
Q 018240 4 RTVDLRSDTVT-----KPTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMGKE--------AGLFVPSGTMGNLI 68 (359)
Q Consensus 4 ~~id~~~~~~~-----~~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~~~--------~~~~~~~gt~a~~~ 68 (359)
.+|+|..+.+. .+.+++.+++.++... ...|+...+..+++++++++++.. +.++++|+++++..
T Consensus 53 ~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l 132 (430)
T PLN00145 53 PVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEI 132 (430)
T ss_pred CeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHH
Confidence 57889887663 3337788877765432 235777778899999999998542 23666667788888
Q ss_pred HHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeec--CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018240 69 SVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN--NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 69 ~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
++..+. ++||+|++++|+|... . ..+...|++++.++. +.++.+|++.+++.++ ++++++++.+|
T Consensus 133 ~~~~l~-~~Gd~Vlv~~P~y~~y-~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--------~~~~~i~i~~P- 199 (430)
T PLN00145 133 IMSVLA-QPGANILLPRPGYPLY-E--ARAVFSGLEVRHFDLLPERGWEVDLEGVEALAD--------ENTVAMVIINP- 199 (430)
T ss_pred HHHHhc-CCCCEEEEcCCCCccH-H--HHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhC--------cCceEEEEeCC-
Confidence 888877 5999999999997664 3 236777888888764 3457899999999888 67888888676
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhcCccEEEE-eccccCCCcee--eEEec--C
Q 018240 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQAADSASV-CLSKGLGAPVG--SVIVG--S 220 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~~~d~~~~-s~~K~~g~~~g--g~~~~--~ 220 (359)
+||||.+++.+++++|+++|+++|++||+||+|....+.. ...++..+.....++++ |+||.|++|+. ||++. +
T Consensus 200 ~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~ 279 (430)
T PLN00145 200 NNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDP 279 (430)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecc
Confidence 6799999999999999999999999999999975433211 11233333322345555 99999988766 88876 4
Q ss_pred HHHHHH---HHHHHHhhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEE
Q 018240 221 KEFIKK---ARRLRKTLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVY 293 (359)
Q Consensus 221 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~ 293 (359)
+.+++. ...+......+...+.+.+.++...++ .+.++.+++++++++.+.+.|++++++.....|.+++++|
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~ 359 (430)
T PLN00145 280 NGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVM 359 (430)
T ss_pred hhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEE
Confidence 444432 122333322222234455555555553 4455577778888999999999988887533467899999
Q ss_pred EEeccc--hH-HHHHHHHHHH-HhcCceeccC----CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 018240 294 FEITED--SK-LYAACLLKKL-EEHGVLVMPE----SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCEE 356 (359)
Q Consensus 294 ~~~~~~--~~-~~~~~~~~~l-~~~gi~~~~~----~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 356 (359)
++++.. .+ .+..+++.+| +++||.+.|+ ..+++||++. .+.+++++.+++|.+++.+..++
T Consensus 360 v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~--~~~~~l~~al~rl~~~~~~~~~~ 428 (430)
T PLN00145 360 VKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFA--IDPPSLEDGLERLKSFCLRHAKL 428 (430)
T ss_pred eccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHHhccc
Confidence 998631 01 1455677666 7889999776 3568999995 58899999999999999887654
No 13
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=7.6e-34 Score=249.26 Aligned_cols=322 Identities=19% Similarity=0.204 Sum_probs=235.4
Q ss_pred ccccccCCCCCCh-HHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHh----CC--C-C-eEEcCCc-hHHHHHHHHHh
Q 018240 4 RTVDLRSDTVTKP-TEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVM----GK--E-A-GLFVPSG-TMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~--~-~-~~~~~~g-t~a~~~~l~~~ 73 (359)
+++||+++++..+ .+.+.+++.+.......|...++..++++.+++++ |. + . .+++++| ++++..++..+
T Consensus 1 ~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~ 80 (350)
T TIGR03537 1 RLFDFGTGDPKEPTPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVF 80 (350)
T ss_pred CeEeccCCCCCCCCCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHH
Confidence 4689999887766 48888888875434445776677899999999987 53 2 2 4555555 45666666666
Q ss_pred hhhcC---CeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccC
Q 018240 74 CETRG---SEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHAN 148 (359)
Q Consensus 74 ~~~~g---~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ 148 (359)
+ ++| |+|+++.|+|..... .++..|++++.++.+. ++.+|++++++.++ ++++++++++ ++|
T Consensus 81 ~-~~g~~~d~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~--------~~~~~i~i~~-p~N 147 (350)
T TIGR03537 81 I-DPEEDRRRVIFGTPGYPVYER---GALFAGGEPTAVKLKKEDGFLLRLEKVEKSIL--------EETKIVWINY-PHN 147 (350)
T ss_pred c-CCCCCCceEEEcCCCCcchHH---HHHhcCCEEEEcccCcccCCccCHHHHHHhhh--------hccEEEEEeC-CCC
Confidence 6 466 699999999776443 3788999999997752 35689999999988 6789999865 577
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCcc-EEEE-eccccCCCcee--eEEecCHHHH
Q 018240 149 CGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAAD-SASV-CLSKGLGAPVG--SVIVGSKEFI 224 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d-~~~~-s~~K~~g~~~g--g~~~~~~~~~ 224 (359)
|||.+++.+++++|.++|+++|++||+|++|..........+...+ +.+ ++++ |+||.+|.++. ||++.++++.
T Consensus 148 PtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~ 225 (350)
T TIGR03537 148 PTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEV--GIENVLAFHSLSKRSGMTGYRSGFVAGDEKLI 225 (350)
T ss_pred CcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhc--CcCCEEEEeecccccCCccccceeeecCHHHH
Confidence 9999999999999999999999999999996533222111122222 223 4444 99999986542 8899999999
Q ss_pred HHHHHHHHhhCCCcchhHHHHHHHHHHH--HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHH
Q 018240 225 KKARRLRKTLGGGMRQVGVLCAAALVAL--QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKL 302 (359)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 302 (359)
+.++.....++.+. +.....++...+ ..+.++.++++.++.+.+.+.|++. |+++. ++.++.++|+.++.. .
T Consensus 226 ~~~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~-~~~g~~~~~~~~~~~--~ 299 (350)
T TIGR03537 226 SFLRKLRANFGVAS--PDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV-GLEYL-YPDATFYLWVKVPSG--I 299 (350)
T ss_pred HHHHHHHHhhccCC--CHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCeEEEEEEECCCC--C
Confidence 99887766655433 333334443444 2444546677788888999999988 88764 345677799998752 4
Q ss_pred HHHHHHHHHHhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018240 303 YAACLLKKLEEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
+..++.+.|.++||.+.++. ..++|+++. .+++++++++++|++
T Consensus 300 ~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 300 DAKDYALRLLENGIVVAPGENFGSGEEGYVRVALV--PTLEECEEALRLWER 349 (350)
T ss_pred CHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHhc
Confidence 67899999988999997652 467999984 678999999988864
No 14
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=7.2e-34 Score=256.08 Aligned_cols=323 Identities=15% Similarity=0.128 Sum_probs=238.9
Q ss_pred ccccccCCCCCChH-HHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCC----CCeEEcCCc-hHHHHHHHHHhhhhc
Q 018240 4 RTVDLRSDTVTKPT-EAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGK----EAGLFVPSG-TMGNLISVLVHCETR 77 (359)
Q Consensus 4 ~~id~~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~----~~~~~~~~g-t~a~~~~l~~~~~~~ 77 (359)
..++|..+.+..+. |.+.+++.+.......|+...+..++++.++++++. +..+++++| ++++..++.+++ ++
T Consensus 86 ~~i~L~~g~p~~~~~p~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~-~p 164 (431)
T PRK15481 86 PLHDLAGGNPDPQRLPDLSRYFARLSRTPRLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHL-LP 164 (431)
T ss_pred hhhhhhcCCCChhHhHHHHHHHHHhhhhhhhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhC-CC
Confidence 35788888776655 677777776543444577777788999999999863 224555555 556666777666 59
Q ss_pred CCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChh
Q 018240 78 GSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVE 157 (359)
Q Consensus 78 g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~ 157 (359)
||.|++++|+|.... ..++..|++++.++.++++ +|++.+++.++ .+++++++.+.+|||||.+++.+
T Consensus 165 gd~Vlv~~P~y~~~~---~~~~~~g~~~~~v~~~~~g-~~~~~l~~~~~--------~~~k~i~~~p~p~NPTG~~~s~~ 232 (431)
T PRK15481 165 GDSVAVEDPCFLSSI---NMLRYAGFSASPVSVDAEG-MQPEKLERALA--------QGARAVILTPRAHNPTGCSLSAR 232 (431)
T ss_pred CCEEEEeCCCcHHHH---HHHHHcCCeEEeeccCCCC-CCHHHHHHHHh--------cCCCEEEECCCCCCCCCccCCHH
Confidence 999999999976654 3478889999999876554 89999999997 57888888768888999999999
Q ss_pred hHHHHHHHHHHc-CcEEEEecccccchhhhcCchhHhhhcCccEEE-EeccccCCCcee--eEEecCHHHHHHHHHHHHh
Q 018240 158 YTDSVGEIAKKH-GLKLHIDGARIFNAAVALGVPVRRLVQAADSAS-VCLSKGLGAPVG--SVIVGSKEFIKKARRLRKT 233 (359)
Q Consensus 158 ~l~~i~~~~~~~-~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~-~s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~ 233 (359)
++++|.++|+++ +++||+||+|...... ...+..... ...+++ .|+||.|+ |+. ||+++++++++.+......
T Consensus 233 ~~~~l~~la~~~~~~~ii~De~Y~~~~~~-~~~~~~~~~-~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~~~~~~ 309 (431)
T PRK15481 233 RAAALRNLLARYPQVLVIIDDHFALLSSS-PYHSVIPQT-TQRWALIRSVSKALG-PDLRLAFVASDSATSARLRLRLNS 309 (431)
T ss_pred HHHHHHHHHHhcCCceEEecCchhhhccC-CCCCCCcCC-CCCEEEEeeeccccC-CCceeEEEeCCHHHHHHHHHHHhc
Confidence 999999999999 9999999996433211 111111111 123444 49999999 533 9999999999888655444
Q ss_pred hCCCcchhHHHHHHHHHHHH-----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHH
Q 018240 234 LGGGMRQVGVLCAAALVALQ-----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLL 308 (359)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (359)
...+. +.+.+.++...++ .++++.++.+.++++.+.+.|++. ++.+. .+.+++++|+.++. +..++.
T Consensus 310 ~~~~~--s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~-~p~gg~f~~~~l~~----~~~~~~ 381 (431)
T PRK15481 310 GTQWV--SHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIP-SPGDGLNLWLPLDT----DSQATA 381 (431)
T ss_pred cccCC--CHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-cCCCeEEEEEECCC----CHHHHH
Confidence 33333 4445555555553 234446777888999999999988 77653 35689999999975 456888
Q ss_pred HHHHhcCceeccCC-------CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 309 KKLEEHGVLVMPES-------STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 309 ~~l~~~gi~~~~~~-------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
+.|.++||.+.|+. ..++||+++ ..+++++++++++|.+++.
T Consensus 382 ~~l~~~gV~v~pg~~f~~~~~~~~iRis~~-~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 382 LTLAKSGWLVREGEAFGVSAPSHGLRITLS-TLNDAEINRLAADLHQALN 430 (431)
T ss_pred HHHHHCCcEEecCCccccCCCCCeEEEEcC-CCChHHHHHHHHHHHHHhc
Confidence 89989999997753 247999997 4679999999999998864
No 15
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3e-33 Score=248.43 Aligned_cols=328 Identities=17% Similarity=0.173 Sum_probs=233.0
Q ss_pred cccccccCCCCCChH-HHHHHHHHcCC-CCCCccCCChHHHHHHHHHHHHhCC------C--CeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSDTVTKPT-EAMRAAMASAE-VDDDVLMHDPTAFRLETEMAKVMGK------E--AGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~~~~~~-~~~~~a~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~------~--~~~~~~~gt~a~~~~l~~ 72 (359)
+..+||..+.+..+. +.+.+++.+.. .....|+...+..++++.++++++. + ..++++|+++++..++.+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~ 108 (384)
T PRK06348 29 PDIIDLSLGDPDLITDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQS 108 (384)
T ss_pred CCcEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHH
Confidence 356899988776544 66666544322 2344577777888999999998832 2 224555556676777777
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018240 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
++ ++|++|++++|+|..... .+...|.+++.++.. +++.+|++++++.++ +++++|++. .++|||
T Consensus 109 ~~-~~gd~vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--------~~~~~v~l~-~p~NPt 175 (384)
T PRK06348 109 IL-DPGDEVIIHEPYFTPYKD---QIEMVGGKPIILETYEEDGFQINVKKLEALIT--------SKTKAIILN-SPNNPT 175 (384)
T ss_pred hc-CCCCEEEEeCCCCcchHH---HHHHcCCEEEEecCCcCcCCcCCHHHHHHhhC--------cCccEEEEe-CCCCCC
Confidence 76 599999999999776543 366778888888642 346689999999887 678899886 467799
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhc-CccEEE-EeccccCCCcee--eEEecCHHHHHH
Q 018240 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQ-AADSAS-VCLSKGLGAPVG--SVIVGSKEFIKK 226 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~d~~~-~s~~K~~g~~~g--g~~~~~~~~~~~ 226 (359)
|.+++.+++++|.++|+++|++||+||+|....+.....+...+.. ...+++ .|+||.+|.|+- ||+++++++.+.
T Consensus 176 G~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~ 255 (384)
T PRK06348 176 GAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIET 255 (384)
T ss_pred CcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHHH
Confidence 9999999999999999999999999999754332211122223321 123444 499999985543 999999999988
Q ss_pred HHHHHHhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHH
Q 018240 227 ARRLRKTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLY 303 (359)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 303 (359)
+.........+. +.+.+.++...+ +.+.++.++.+.++++.+.+.|++++++.+. ++.++.++|+.++. .+.+
T Consensus 256 ~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~-~p~gg~~~~~~~~~-~~~~ 331 (384)
T PRK06348 256 AKIINEGICFSA--PTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLH-PPKGSIYAFINIKK-TGLS 331 (384)
T ss_pred HHHHHHhccCCC--CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-cCCeeEEEEEeccc-CCCC
Confidence 877665544443 333444444444 3445546667788889999999988777664 44567788999874 1246
Q ss_pred HHHHHHHH-HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 304 AACLLKKL-EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 304 ~~~~~~~l-~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
..++.+.| +++||.+.|+. ..++|++++ .+++++++.+++|+++
T Consensus 332 ~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 332 SVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT--VGIEVLEEAFNRIEKM 382 (384)
T ss_pred HHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec--CCHHHHHHHHHHHHhh
Confidence 77888887 57899997753 468999995 6889999999988754
No 16
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-33 Score=249.64 Aligned_cols=324 Identities=16% Similarity=0.164 Sum_probs=233.8
Q ss_pred ccccccCCCCCC-hHHHHHHHHHcCCCCCCccCC-ChHHHHHHHHHHHHhC------CC--CeEEcCCc-hHHHHHHHHH
Q 018240 4 RTVDLRSDTVTK-PTEAMRAAMASAEVDDDVLMH-DPTAFRLETEMAKVMG------KE--AGLFVPSG-TMGNLISVLV 72 (359)
Q Consensus 4 ~~id~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~-~~~~~~l~~~la~~~~------~~--~~~~~~~g-t~a~~~~l~~ 72 (359)
..|||..+.+.. |.+.+.+++.+.......|++ .++..++++.++++++ .+ ..+++++| ++++..++.+
T Consensus 33 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~ 112 (399)
T PRK07681 33 KMIDLSIGNPDMPPADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMV 112 (399)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHH
Confidence 568999887753 457788888765433233443 3678899999999875 22 34555555 4566566666
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCC--CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018240 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQD--GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
++ ++||.|++++|+|... . ..+...|++++.++.+++ +.+|++++++.+. +++++|++++| +|||
T Consensus 113 ~~-~~Gd~Vlv~~P~y~~~-~--~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~--------~~~k~v~l~~P-~NPT 179 (399)
T PRK07681 113 YA-NPGDIILVPDPGYTAY-E--TGIQMAGATSYYMPLKKENDFLPDLELIPEEIA--------DKAKMMILNFP-GNPV 179 (399)
T ss_pred hC-CCCCEEEECCCCccch-H--HHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc--------ccceEEEEeCC-CCCc
Confidence 66 6999999999997664 4 347788999999987643 5679999998887 67899998544 6699
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhcCcc-EE-EEeccccCCCcee--eEEecCHHHHH
Q 018240 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQAAD-SA-SVCLSKGLGAPVG--SVIVGSKEFIK 225 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~~~d-~~-~~s~~K~~g~~~g--g~~~~~~~~~~ 225 (359)
|.+++.+++++|+++|++||++||+||+|....+... ..+...+....+ ++ ..|+||.||.|+- ||+++++++++
T Consensus 180 G~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~ 259 (399)
T PRK07681 180 PAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVR 259 (399)
T ss_pred CcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCHHHHH
Confidence 9999999999999999999999999999753322111 112222221223 34 4499999986543 89999999999
Q ss_pred HHHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHH
Q 018240 226 KARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKL 302 (359)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 302 (359)
.+.........+. +...+.++...++ .+.++.++.+.++++.+.+.|++. |+++. .+..++++|+.++.. .
T Consensus 260 ~~~~~~~~~~~~~--s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~p~~g~f~~~~l~~~--~ 333 (399)
T PRK07681 260 ALTQFKSNTDYGV--FLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-GWNVD-KPAGSMFVWAEIPKG--W 333 (399)
T ss_pred HHHHHHhhcccCC--CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCeeeEEEEECCCC--C
Confidence 9877665544444 3334444444553 344445666788889999999998 88763 345799999998752 4
Q ss_pred HHHHHHHHHHh-cCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018240 303 YAACLLKKLEE-HGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 303 ~~~~~~~~l~~-~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
+..++.+.|.+ +||.+.|+. .+++|+++. .+++++++++++|++
T Consensus 334 ~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~--~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 334 TSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALV--QDEEVLQQAVENIRN 384 (399)
T ss_pred CHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 67788888854 999997752 458999995 578999999999987
No 17
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-33 Score=248.00 Aligned_cols=328 Identities=16% Similarity=0.094 Sum_probs=236.9
Q ss_pred cccccccCCCCCC-hHHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHhC------CC--CeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSDTVTK-PTEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVMG------KE--AGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~~~~-~~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~------~~--~~~~~~~gt~a~~~~l~~ 72 (359)
+.+++|.++.+.. |++.+.+++.+.... ...|...++..++++.++++++ .+ ..++++|+++++..++..
T Consensus 32 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 111 (387)
T PRK08960 32 HDVIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSL 111 (387)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHH
Confidence 4578999988774 457888888775432 3457777788999999999974 22 235666667777777777
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018240 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
++ .+||.|++++|+|..... .+...|.+++.++.+. ++.+|++++++.++ ++++++++.+ ++|||
T Consensus 112 ~~-~~gd~vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~--------~~~~~i~i~~-p~NPt 178 (387)
T PRK08960 112 LV-DPGKHWLLADPGYPCNRH---FLRLVEGAAQLVPVGPDSRYQLTPALVERHWN--------ADTVGALVAS-PANPT 178 (387)
T ss_pred hc-CCCCEEEEcCCCCcchHH---HHHhcCCeEEEEecCcccCCCCCHHHHHHHhC--------ccceEEEEEC-CCCCC
Confidence 76 699999999999877554 3666788888887654 35789999999888 6777888855 46699
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEE-eccccCCCcee--eEEecCHHHHHHH
Q 018240 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASV-CLSKGLGAPVG--SVIVGSKEFIKKA 227 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~-s~~K~~g~~~g--g~~~~~~~~~~~~ 227 (359)
|.+++.+++++|+++|++||+++|+||+|....+.....+.... ..+++++ |+||.+|.++. ||+++++++++.+
T Consensus 179 G~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~--~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~ 256 (387)
T PRK08960 179 GTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEV--DDDAFVLNSFSKYFGMTGWRLGWLVAPPAAVPEL 256 (387)
T ss_pred CcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhc--cCCEEEEeecccccCCcccEEEEEEcCHHHHHHH
Confidence 99999999999999999999999999997432221111122222 3345555 99999986543 9999999999988
Q ss_pred HHHHHhhCCCcchhHHHHHHHHHHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHH
Q 018240 228 RRLRKTLGGGMRQVGVLCAAALVAL----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLY 303 (359)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 303 (359)
.........+.+ .+.+.++...+ ..++++.++.+.++++.+.+.|++. ++.+...+.+++++|++++.. ..+
T Consensus 257 ~~~~~~~~~~~s--~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~p~g~~f~~~~~~~~-~~~ 332 (387)
T PRK08960 257 EKLAQNLYISAS--TPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL-GFGIAVEPQGAFYLYADISAF-GGD 332 (387)
T ss_pred HHHHhhhccCCC--HHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCcCCCeeEEEEEecccc-CCC
Confidence 777665554443 33333333334 2445546667788899999999987 766433356788999998741 135
Q ss_pred HHHHHHHH-HhcCceeccC-------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 304 AACLLKKL-EEHGVLVMPE-------SSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 304 ~~~~~~~l-~~~gi~~~~~-------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
..++.++| .++||.+.|+ ...++|++++ .+.+++..++++|.++++
T Consensus 333 ~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~--~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 333 AFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYT--QSLPRLQEAVERIARGLR 386 (387)
T ss_pred HHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 67888887 6799999765 2358999996 367888888888877654
No 18
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=1.6e-33 Score=254.28 Aligned_cols=337 Identities=17% Similarity=0.230 Sum_probs=249.6
Q ss_pred cccccccCCCCC-C-hHHHHHHHHHcCCCC-C-------CccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSDTVT-K-PTEAMRAAMASAEVD-D-------DVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~~~-~-~~~~~~~a~~~~~~~-~-------~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~ 72 (359)
.+++||.+.++. . .+|++++++.++... . ..|+..+...++|++++++++.+..+++++|..++..++.+
T Consensus 109 ~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~~i~~s~G~~a~~sai~a 188 (481)
T PLN02822 109 KDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPDSILYSYGLSTIFSVIPA 188 (481)
T ss_pred ceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHH
Confidence 357999987663 2 247777777664432 1 14667788999999999999998888888888888888888
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCcc-CCce-eEEEEeccccCCC
Q 018240 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIV-YPTT-RLICLENTHANCG 150 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~-~~v~i~~~~~~pt 150 (359)
+. ++||.|+++...|++... + ..+.+.+++.++++ |.+.++..+++...... .+++ ++|+++++++ ++
T Consensus 189 ~~-~~gd~Ii~d~~~H~s~~~-~--~~ls~~~~~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~-~~ 258 (481)
T PLN02822 189 FC-KKGDIIVADEGVHWGIQN-G--LYLSRSTIVYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQ-NS 258 (481)
T ss_pred hC-CCCCEEEEeCCccHHHHH-H--HHHcCCeEEEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCC-CC
Confidence 77 599999999999988765 3 66778888888876 67777776654211100 1234 6888877666 69
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh----cCccEEEEeccccCCCceeeEEecCHHHHHH
Q 018240 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV----QAADSASVCLSKGLGAPVGSVIVGSKEFIKK 226 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~----~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~ 226 (359)
|.++| +++|+++|++||+++|+||+|++|.++..|....+.. ...|+++.|++|.+|+ .||++++++++++.
T Consensus 259 G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~-~GG~i~g~~~ii~~ 334 (481)
T PLN02822 259 GQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALAT-EGGFCTGSARVVDH 334 (481)
T ss_pred CCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhh-CCeEEEcCHHHHHH
Confidence 99998 7999999999999999999998877654444333321 2567888899999984 66889999999988
Q ss_pred HHHHHHhhCCCcchhHHHHHHHHHHHHHhH--HHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccc-----
Q 018240 227 ARRLRKTLGGGMRQVGVLCAAALVALQENV--LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITED----- 299 (359)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----- 299 (359)
++.....+..+.+.++..++++..+++... .+.+++++++.+++++.|++.+|+.+.. +..++++++.++..
T Consensus 335 ~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~-~~~spi~~l~l~~~~~~~~ 413 (481)
T PLN02822 335 QRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIPGLSIGS-NTLSPIVFLHLEKSTGSAK 413 (481)
T ss_pred HHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCCCCEEEEEeCCCccccc
Confidence 764433323333334566666666664322 2477789999999999999987887743 45788998888641
Q ss_pred -hHHHHHHHHHHHH-hcCceeccC---------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 300 -SKLYAACLLKKLE-EHGVLVMPE---------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 300 -~~~~~~~~~~~l~-~~gi~~~~~---------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+.....+++++|. ++||.+.+. .+..+|++++..++++++++++++|+++++++.
T Consensus 414 ~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~~ 479 (481)
T PLN02822 414 EDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASVL 479 (481)
T ss_pred chHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHHh
Confidence 1122468899984 899999754 134699999989999999999999999988764
No 19
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=2.7e-33 Score=249.34 Aligned_cols=327 Identities=15% Similarity=0.104 Sum_probs=234.3
Q ss_pred ccccccCCCCCCh-HHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHh----C--CC-C-eEEcCCch-HHHHHHHH
Q 018240 4 RTVDLRSDTVTKP-TEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVM----G--KE-A-GLFVPSGT-MGNLISVL 71 (359)
Q Consensus 4 ~~id~~~~~~~~~-~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~----~--~~-~-~~~~~~gt-~a~~~~l~ 71 (359)
..|+|..+.+..+ ++.+.+++.+.... ...|+..++..++++++++++ | .+ . .+++++|+ +++..++.
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~ 110 (388)
T PRK07366 31 ELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPL 110 (388)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHH
Confidence 4688988766544 57888888765432 234666778899999999988 3 22 2 46666555 56666666
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCC--CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC
Q 018240 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQD--GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC 149 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p 149 (359)
+++ .+||.|++++|+|.... ..++..|.+++.++.+.+ +.+|++++++.+. ++++++++++ +|||
T Consensus 111 ~l~-~~gd~Vlv~~P~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~--------~~~k~i~l~~-p~NP 177 (388)
T PRK07366 111 AVL-NPGDFALLLDPGYPSHA---GGVYLAGGQIYPMPLRAENDFLPVFADIPTEVL--------AQARLMVLSY-PHNP 177 (388)
T ss_pred HhC-CCCCEEEEcCCCCcchH---HHHHhcCCEEEEEECCCccCCCCCHHHHHHhhc--------ccceEEEEeC-CCCC
Confidence 666 59999999999976644 347788999999977533 5578888888776 5788999855 6679
Q ss_pred CceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc--CchhHhhhcCcc-EE-EEeccccCCCcee--eEEecCHHH
Q 018240 150 GGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL--GVPVRRLVQAAD-SA-SVCLSKGLGAPVG--SVIVGSKEF 223 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~--~~~~~~~~~~~d-~~-~~s~~K~~g~~~g--g~~~~~~~~ 223 (359)
||.+++.+++++|+++|++||++||+||+|....+... ..+...+....+ ++ +.|+||.||.|+. ||+++++++
T Consensus 178 TG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~l 257 (388)
T PRK07366 178 TTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQL 257 (388)
T ss_pred CCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHH
Confidence 99999999999999999999999999999644332110 112222222222 34 4599999986544 999999999
Q ss_pred HHHHHHHHHhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccch
Q 018240 224 IKKARRLRKTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDS 300 (359)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 300 (359)
++.+.........+.. .....++..++ +.++++.++.+.++++.+.+.|+++ ++.+. .+..++++|+.++...
T Consensus 258 i~~l~~~~~~~~~~~~--~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~-~p~~g~f~~~~~~~~~ 333 (388)
T PRK07366 258 IQALRQVKAVVDFNQY--RGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI-GWPVP-LPEATMYVWAKLPEPW 333 (388)
T ss_pred HHHHHHHHhhcccCCC--HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCeeEEEEEECCccc
Confidence 9998877766554431 22222233333 3455656777888899999999988 77653 3568999999987521
Q ss_pred HHHHHHHHHHH-HhcCceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 301 KLYAACLLKKL-EEHGVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 301 ~~~~~~~~~~l-~~~gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
..+..++.+.| .++||.+.|+ +.+++||+++ .+++++++++++|.++
T Consensus 334 ~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 334 QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALV--HDPDILEEAVERIAAF 387 (388)
T ss_pred CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 12356787777 7889999775 2468999995 5789999999999865
No 20
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=2e-33 Score=249.46 Aligned_cols=330 Identities=18% Similarity=0.162 Sum_probs=238.8
Q ss_pred ccccccCCCCCCh-HHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHhC----C----C-CeEEcCCchHHHHHHHHH
Q 018240 4 RTVDLRSDTVTKP-TEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVMG----K----E-AGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 4 ~~id~~~~~~~~~-~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~----~----~-~~~~~~~gt~a~~~~l~~ 72 (359)
..|+|..+.+..+ .+.+.+++.+.... ...|...++..+++++++++++ . + ..++++|+++|+..++..
T Consensus 21 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~ 100 (378)
T PRK07682 21 GVISLGVGEPDFVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRA 100 (378)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHH
Confidence 4688888766543 35566666554322 2347667888999999999885 2 1 235555567788888877
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018240 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
++ ++||.|++++|+|.. +. ..++..|.+++.++.+ +++.+|++++++.++ +++++++++++ +|||
T Consensus 101 l~-~~gd~vl~~~p~y~~-~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--------~~~~~v~~~~p-~NPt 167 (378)
T PRK07682 101 II-NPGDEVLIVEPSFVS-YA--PLVTLAGGVPVPVATTLENEFKVQPAQIEAAIT--------AKTKAILLCSP-NNPT 167 (378)
T ss_pred hC-CCCCEEEEeCCCchh-hH--HHHHHcCCEEEEeecCCccCCCCCHHHHHhhcC--------cccEEEEEECC-CCCc
Confidence 77 599999999999775 43 3466778888888654 357889999999987 67889988665 6799
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhc--CccEEEEeccccCCCcee--eEEecCHHHHHH
Q 018240 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQ--AADSASVCLSKGLGAPVG--SVIVGSKEFIKK 226 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~--~~d~~~~s~~K~~g~~~g--g~~~~~~~~~~~ 226 (359)
|.+++.+++++|.++|++|++++|+||+|....+.....+...+.. ...+++.|+||.||.|+. ||+++++++++.
T Consensus 168 G~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~ 247 (378)
T PRK07682 168 GAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEA 247 (378)
T ss_pred CcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHH
Confidence 9999999999999999999999999999754433211122233321 122444599999986543 899999999999
Q ss_pred HHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHH
Q 018240 227 ARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLY 303 (359)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 303 (359)
+.........+. +...+.++...++ ...+..++.+.++++.+.+.|+++ ++++. .+.++.++|+.++. .+.+
T Consensus 248 l~~~~~~~~~~~--~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~p~g~~~~~~~~~~-~~~~ 322 (378)
T PRK07682 248 MLKIHQYSMMCA--PTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCH-VPGGAFYAFPSISS-TGLS 322 (378)
T ss_pred HHHHHHhhccCC--CHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCeeEEEEEeccC-CCCC
Confidence 876654333333 3444555555553 234446667888999999999998 88764 34567788887753 1246
Q ss_pred HHHHHHHH-HhcCceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 304 AACLLKKL-EEHGVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 304 ~~~~~~~l-~~~gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
..++.+.| .++||.+.|+ +..++||+++ .+++++++.+++|+++++++
T Consensus 323 ~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 323 SEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYA--TSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred HHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHhhc
Confidence 77888887 5889999775 2578999996 57899999999999988764
No 21
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-33 Score=247.01 Aligned_cols=333 Identities=20% Similarity=0.192 Sum_probs=237.5
Q ss_pred cccccccCCCCC-ChHHHHHHHHHcCCC--CCCccCCChHHHHHHHHHH----HHhCC----CCeEEcC-CchHHHHHHH
Q 018240 3 TRTVDLRSDTVT-KPTEAMRAAMASAEV--DDDVLMHDPTAFRLETEMA----KVMGK----EAGLFVP-SGTMGNLISV 70 (359)
Q Consensus 3 ~~~id~~~~~~~-~~~~~~~~a~~~~~~--~~~~~~~~~~~~~l~~~la----~~~~~----~~~~~~~-~gt~a~~~~l 70 (359)
.+.++|..+.+. .|++.+.+++.+... ....|....+..++++.++ +.+|. +..++++ |+++++..++
T Consensus 27 ~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~ 106 (389)
T PRK05957 27 PGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAI 106 (389)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHH
Confidence 356888887765 455778888866432 2234655555555555554 44575 2335555 4556776777
Q ss_pred HHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018240 71 LVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 71 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
..++ .+||.|++++|+|..... ..+..|++++.++.+.++.+|++++++.++ +++++|++.+ ++|||
T Consensus 107 ~~~~-~~gd~Vlv~~P~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~--------~~~klv~~~~-p~NPt 173 (389)
T PRK05957 107 LAIT-DPGDEIILNTPYYFNHEM---AITMAGCQPILVPTDDNYQLQPEAIEQAIT--------PKTRAIVTIS-PNNPT 173 (389)
T ss_pred HHhc-CCCCEEEEeCCCCcCHHH---HHHhcCCEEEEeecCCCCCcCHHHHHHhcC--------cCceEEEEeC-CCCCC
Confidence 7776 599999999999766433 356789999999887778899999999998 6889998865 56799
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcC-chhHhhhc-CccEE-EEeccccCCCcee--eEEecCHHHHH
Q 018240 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALG-VPVRRLVQ-AADSA-SVCLSKGLGAPVG--SVIVGSKEFIK 225 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~-~~d~~-~~s~~K~~g~~~g--g~~~~~~~~~~ 225 (359)
|.+++.+++++|+++|+++|+++|+||+|....+.... .+...+.. ...++ +.|+||.+|.|+- ||++.++++++
T Consensus 174 G~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~ 253 (389)
T PRK05957 174 GVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLE 253 (389)
T ss_pred CcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHH
Confidence 99999999999999999999999999996543322111 12222211 12244 4599999986553 89999999999
Q ss_pred HHHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCc-eEecCCccceEEEEEeccchH
Q 018240 226 KARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGL-RVDVDAVETNIVYFEITEDSK 301 (359)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~-~~~~~~~~~~~~~~~~~~~~~ 301 (359)
++.........+.+ ...+.++...++ .+.++.++++.++++.+.+.|++++++ .+ .++.++.++|++++..
T Consensus 254 ~~~~~~~~~~~~~~--~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~gg~~~~~~~~~~-- 328 (389)
T PRK05957 254 AIKKIQDTILICPP--VVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTL-HPANGAFYCFLKVNTD-- 328 (389)
T ss_pred HHHHHHhhcccCCC--cHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccc-cCCCeeEEEEEeCCCC--
Confidence 98877665544443 233444444443 234546667888899999999988664 44 3455678899998652
Q ss_pred HHHHHHHHHH-HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 302 LYAACLLKKL-EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 302 ~~~~~~~~~l-~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
.+..++.++| +++||.+.|+. .+++|++++ ..+++++++.+++|.+.++++-
T Consensus 329 ~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~-~~~~~~l~~~~~~l~~~~~~~~ 387 (389)
T PRK05957 329 LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYG-ALQKATAKEGIERLVQGLKTIV 387 (389)
T ss_pred CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHHhhh
Confidence 5778899998 57999998863 358999996 4678999999999999888764
No 22
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.1e-33 Score=247.71 Aligned_cols=328 Identities=18% Similarity=0.183 Sum_probs=239.5
Q ss_pred ccccccCCCCCCh-HHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHh----C--CC--CeEEcCCchHHHHHHHHHh
Q 018240 4 RTVDLRSDTVTKP-TEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVM----G--KE--AGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~~~-~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~----~--~~--~~~~~~~gt~a~~~~l~~~ 73 (359)
.+|+|..+.+..| .+.+.+++.+.... ...|+..++..++++.+++++ | .+ ..++++|+++++..++..+
T Consensus 25 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l 104 (382)
T PRK06108 25 GVLPLWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQAL 104 (382)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHh
Confidence 5688988876655 47888888775433 234777778889999999876 5 22 2356666777877887777
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecCC---CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018240 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ---DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
+ ++||.|++++|+|..... .++..|++++.++.+. ++.+|++++++.++ ++++++++++ ++|||
T Consensus 105 ~-~~gd~vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~--------~~~~~i~l~~-p~NPt 171 (382)
T PRK06108 105 V-GPGDEVVAVTPLWPNLVA---APKILGARVVCVPLDFGGGGWTLDLDRLLAAIT--------PRTRALFINS-PNNPT 171 (382)
T ss_pred c-CCCCEEEEeCCCccchHH---HHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC--------ccceEEEEEC-CCCCC
Confidence 7 599999999999766443 3677898999887653 35689999999887 6788998865 56799
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcC--chhHhhhc-Ccc-EEEEeccccCCCcee--eEEecCHHHH
Q 018240 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALG--VPVRRLVQ-AAD-SASVCLSKGLGAPVG--SVIVGSKEFI 224 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~--~~~~~~~~-~~d-~~~~s~~K~~g~~~g--g~~~~~~~~~ 224 (359)
|.+++.+++++|.++|+++|+++|+|++|......... .+...+.. ... +++.|+||.||.++. ||++++++++
T Consensus 172 G~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~ 251 (382)
T PRK06108 172 GWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALG 251 (382)
T ss_pred CcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHH
Confidence 99999999999999999999999999997554332011 12222221 122 445599999986532 8999999999
Q ss_pred HHHHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchH
Q 018240 225 KKARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSK 301 (359)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 301 (359)
+.+.........+. +...+.++...++ .+.++.++++.++++.+.+.|++++++++.. +..+.++|+.++..
T Consensus 252 ~~~~~~~~~~~~~~--~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-p~~g~~~~~~l~~~-- 326 (382)
T PRK06108 252 QVLEKLIEYNTSCV--AQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAK-PDGAMYAFFRIPGV-- 326 (382)
T ss_pred HHHHHHHHhcccCC--ChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccC-CCeeEEEEEeCCCC--
Confidence 98876654333332 3444455555553 3344566778888899999999888887743 45678889988752
Q ss_pred HHHHHHHHHH-HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 302 LYAACLLKKL-EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 302 ~~~~~~~~~l-~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.+..++.++| .++||.+.|+. ..++|++++. +++++++++++|+++++
T Consensus 327 ~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 327 TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 3567888888 67899997752 5689999974 89999999999988764
No 23
>PLN02187 rooty/superroot1
Probab=100.00 E-value=1.1e-32 Score=248.48 Aligned_cols=339 Identities=14% Similarity=0.126 Sum_probs=237.4
Q ss_pred ccccccCCCCC-----ChHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhCC------C--CeEEcCCchHHHHH
Q 018240 4 RTVDLRSDTVT-----KPTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMGK------E--AGLFVPSGTMGNLI 68 (359)
Q Consensus 4 ~~id~~~~~~~-----~~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~~------~--~~~~~~~gt~a~~~ 68 (359)
.+|+|..+.+. .+.+++.+++.+.... ...|+..++..++++.++++++. + ..++++|+++++..
T Consensus 67 ~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~ 146 (462)
T PLN02187 67 TILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEI 146 (462)
T ss_pred CeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHH
Confidence 46888887554 2235667766654332 23577778889999999999853 1 22455555677777
Q ss_pred HHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018240 69 SVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 69 ~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
++..++ ++||.|++++|+|.. +. ..+...|++++.++.. .++.+|++++++.++ ++++++++.+|
T Consensus 147 ~~~~l~-~pGd~Vlv~~P~y~~-y~--~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~--------~~~~~v~i~nP- 213 (462)
T PLN02187 147 VFESLA-RPNANILLPRPGFPH-YD--ARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD--------ENTVAMVVINP- 213 (462)
T ss_pred HHHHhc-CCCCEEEEeCCCCcc-HH--HHHHHcCCEEEEEeCccccCCccCHHHHHHhcC--------CCcEEEEEeCC-
Confidence 777777 699999999999766 44 3477888899888653 468899999999887 67888888665
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhcCccEEEE-eccccCCCcee--eEEec-CH
Q 018240 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQAADSASV-CLSKGLGAPVG--SVIVG-SK 221 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~~~d~~~~-s~~K~~g~~~g--g~~~~-~~ 221 (359)
+||||.+++.+++++|+++|++||++||+||+|....+.. ...+...+.....++++ |+||.|+.|+. ||+++ ++
T Consensus 214 ~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p 293 (462)
T PLN02187 214 NNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDP 293 (462)
T ss_pred CCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCc
Confidence 5799999999999999999999999999999975433221 11233333222235555 99999987655 88886 33
Q ss_pred -H---HHHHHHHHHHhhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEE
Q 018240 222 -E---FIKKARRLRKTLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVY 293 (359)
Q Consensus 222 -~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~ 293 (359)
. .++.+......+..+...+.+.+.++...++ .+.++.++.+.++++.+.+.|+++++......|.+++|+|
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~ 373 (462)
T PLN02187 294 EGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLL 373 (462)
T ss_pred hhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEE
Confidence 3 3345555555544433334445555555553 4455567778888999999999885543222356789999
Q ss_pred EEeccc--hHH-HHHHHHHHH-HhcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhhc
Q 018240 294 FEITED--SKL-YAACLLKKL-EEHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYAGVCEEN 357 (359)
Q Consensus 294 ~~~~~~--~~~-~~~~~~~~l-~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 357 (359)
+.++.. .+. +..+++.++ .++||.+.|+. .+++||++. .+++.+++.+++|.+++++..++.
T Consensus 374 ~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~--~~~e~l~~al~rL~~~l~~~~~~~ 443 (462)
T PLN02187 374 TKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIG--VEAHMLEDALERLKGFCTRHAKKT 443 (462)
T ss_pred eecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHHhhhcc
Confidence 987531 111 344555555 89999998764 468999995 678999999999999998876543
No 24
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-33 Score=248.23 Aligned_cols=330 Identities=17% Similarity=0.189 Sum_probs=241.7
Q ss_pred ccccccCCCCCCh-HHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHh----CC--C--CeEEcCCchHHHHHHHHHh
Q 018240 4 RTVDLRSDTVTKP-TEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVM----GK--E--AGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~~~-~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~----~~--~--~~~~~~~gt~a~~~~l~~~ 73 (359)
+.|||..+.+..+ .+.+.+++.+.... ...|+..++..++++.+++++ |. + ..++++|+++++..++..+
T Consensus 34 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l 113 (391)
T PRK08361 34 NVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESL 113 (391)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHh
Confidence 4688988876654 47777777664332 234766788899999999987 32 1 2356666777888888877
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018240 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
+ ++|+.|++++|+|.+... .+...|++++.++.+. ++.+|++++++.++ +++++++++++ +||||
T Consensus 114 ~-~~g~~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~--------~~~~~v~i~~p-~NPtG 180 (391)
T PRK08361 114 L-EEGDEVIIPDPAFVCYVE---DAKIAEAKPIRIPLREENEFQPDPDELLELIT--------KRTRMIVINYP-NNPTG 180 (391)
T ss_pred c-CCCCEEEEcCCCCcccHH---HHHHcCCEEEEEecCCccCCCCCHHHHHHhcc--------cccEEEEEeCC-CCCCC
Confidence 7 599999999999877553 3677888999887654 45789999999998 67889988655 67999
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhcCccEEEEeccccCCCcee--eEEecCHHHHHHHH
Q 018240 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQAADSASVCLSKGLGAPVG--SVIVGSKEFIKKAR 228 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~~~d~~~~s~~K~~g~~~g--g~~~~~~~~~~~~~ 228 (359)
.++|.+++++|.++|+++++++|+||+|....... ...+...+....++++.|+||.||.++. ||+++++++++.+.
T Consensus 181 ~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~ 260 (391)
T PRK08361 181 ATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMI 260 (391)
T ss_pred cCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHH
Confidence 99999999999999999999999999975433211 1122222222334556699999987642 89999999988877
Q ss_pred HHHHhhCCCcchhHHHHHHHHHHHH-----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHH
Q 018240 229 RLRKTLGGGMRQVGVLCAAALVALQ-----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLY 303 (359)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 303 (359)
........+. +...+.++...++ .+++..++++.++++.+.+.|++++++.+. ++.++.++|+.++. .+.+
T Consensus 261 ~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~-~p~g~~~~~~~l~~-~~~~ 336 (391)
T PRK08361 261 KLHAYIIGNV--ASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVF-EPKGAFYVFANIDE-TGMS 336 (391)
T ss_pred HHHhhhccCC--ChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeec-CCCEEEEEEEECCC-CCCC
Confidence 6655443333 3344455444553 234556677788889999999998787764 34567789998874 2246
Q ss_pred HHHHHHHH-HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 304 AACLLKKL-EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 304 ~~~~~~~l-~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
..++.+.| .++||.+.|+. ..++|++++ .+++++++.+++|++++++
T Consensus 337 ~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 337 SEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYA--TSKEKLIEAMERMEKALEE 390 (391)
T ss_pred HHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHhc
Confidence 77888888 56899997752 468999996 5788999999999988764
No 25
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-32 Score=247.44 Aligned_cols=334 Identities=18% Similarity=0.190 Sum_probs=254.8
Q ss_pred cccccccCCCCC---ChHHHHHHHHHcCCC----C-CCccCCChHHHHHHHHHHHHhC----CC---CeEEcCCchH-HH
Q 018240 3 TRTVDLRSDTVT---KPTEAMRAAMASAEV----D-DDVLMHDPTAFRLETEMAKVMG----KE---AGLFVPSGTM-GN 66 (359)
Q Consensus 3 ~~~id~~~~~~~---~~~~~~~~a~~~~~~----~-~~~~~~~~~~~~l~~~la~~~~----~~---~~~~~~~gt~-a~ 66 (359)
+..++|..+.+. +|...+.+++.+... . ...|+..++...+++.+++++. .. ..+++++|++ |+
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al 168 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL 168 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence 567889887654 455666666655331 2 2356677899999999999885 21 2366666665 55
Q ss_pred HHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018240 67 LISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 67 ~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
..++..++ ++||.|++.+|+|..... +.+..|++++.|+.+++| +|++.|++.+++ .+++++|+.+++
T Consensus 169 ~l~~~~l~-~pGd~v~vE~PtY~~~~~---~~~~~g~~~~~vp~d~~G-~~~e~le~~~~~-------~~~k~~y~~P~~ 236 (459)
T COG1167 169 DLLLRLLL-DPGDTVLVEDPTYPGALQ---ALEALGARVIPVPVDEDG-IDPEALEEALAQ-------WKPKAVYVTPTF 236 (459)
T ss_pred HHHHHHhC-CCCCEEEEcCCCcHHHHH---HHHHcCCcEEecCCCCCC-CCHHHHHHHHhh-------cCCcEEEECCCC
Confidence 55555555 699999999999888764 488899999999988555 799999999996 589999999999
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh---HhhhcCccEEEE-eccccCCCcee-eEEecCH
Q 018240 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV---RRLVQAADSASV-CLSKGLGAPVG-SVIVGSK 221 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~~~~~~d~~~~-s~~K~~g~~~g-g~~~~~~ 221 (359)
+||||.++|.+..++|.++|++||++||+|+.| +.+.+.+.+. ..+...-.++++ ||||.+..... ||++.++
T Consensus 237 qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y--~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~ 314 (459)
T COG1167 237 QNPTGVTMSLERRKALLALAEKYDVLIIEDDYY--GELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPP 314 (459)
T ss_pred CCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcc--hhhhcCCCCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCH
Confidence 999999999999999999999999999999984 4444444333 333222335555 99999986556 9999999
Q ss_pred HHHHHHHHHHHhhCCCcchhHHHHHHHHH---HHHHhHHHHhhhHHHHHHHHHHHHhcC-C-CceEecCCccceEEEEEe
Q 018240 222 EFIKKARRLRKTLGGGMRQVGVLCAAALV---ALQENVLVMLDGDHKKAKLLAEGLNQL-K-GLRVDVDAVETNIVYFEI 296 (359)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~l~~~l~~~-~-g~~~~~~~~~~~~~~~~~ 296 (359)
++++.+...+.....+.+...+...+... .+..++...+..+.++++.+.+.|++. + .+.+ ..+.+|.++|+.+
T Consensus 315 ~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~-~~p~gG~flwl~l 393 (459)
T COG1167 315 ELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATW-TRPEGGLFLWLEL 393 (459)
T ss_pred HHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeee-ecCCceEEEEEEc
Confidence 99999988777766666443333333322 245666667778889999999999997 3 3444 4456799999999
Q ss_pred ccchHHHHHHHHHHHHhcCceecc-C--------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 297 TEDSKLYAACLLKKLEEHGVLVMP-E--------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 297 ~~~~~~~~~~~~~~l~~~gi~~~~-~--------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+.+ ++..++.+.+.++|+.+.+ + ...++|++++ ..+++++++.++.|.+++++..
T Consensus 394 ~~~--~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s-~~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 394 PEG--IDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFS-SPSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred CCC--CCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHHHHHHHHh
Confidence 974 6888999999999999977 3 1347999998 6779999999999999988764
No 26
>PRK07324 transaminase; Validated
Probab=100.00 E-value=3.2e-33 Score=246.81 Aligned_cols=302 Identities=17% Similarity=0.127 Sum_probs=222.4
Q ss_pred CCccCCChHHHHHHHHHHHHhCC-C--CeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCcccee
Q 018240 31 DDVLMHDPTAFRLETEMAKVMGK-E--AGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRT 107 (359)
Q Consensus 31 ~~~~~~~~~~~~l~~~la~~~~~-~--~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~ 107 (359)
...|+...+..++++.++++++. + ..++++|+++++..++.+++ .+||+|+++.|+|.... ..++..|.+++.
T Consensus 55 ~~~Y~~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~-~~gd~Vl~~~P~y~~~~---~~~~~~g~~v~~ 130 (373)
T PRK07324 55 KLTYGWIEGSPEFKEAVASLYQNVKPENILQTNGATGANFLVLYALV-EPGDHVISVYPTYQQLY---DIPESLGAEVDY 130 (373)
T ss_pred CccCCCCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhC-CCCCEEEEcCCCchhHH---HHHHHcCCEEEE
Confidence 34577777889999999999853 2 33566667788888888887 59999999999976654 347788989999
Q ss_pred eecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhh
Q 018240 108 VKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAV 185 (359)
Q Consensus 108 v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~ 185 (359)
++.+. ++.+|++++++.++ +++++|++. .++||||.+++.+++++|+++|++||++||+|++|......
T Consensus 131 v~~~~~~~~~~d~~~l~~~~~--------~~~kli~i~-~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~ 201 (373)
T PRK07324 131 WQLKEENGWLPDLDELRRLVR--------PNTKLICIN-NANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDED 201 (373)
T ss_pred EecccccCCCCCHHHHHHhCC--------CCCcEEEEe-CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccC
Confidence 87653 35679999999887 688999885 55679999999999999999999999999999996432221
Q ss_pred hcCchhHhhhcCccEEEEeccccCCCcee--eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHH---HHhHHHHh
Q 018240 186 ALGVPVRRLVQAADSASVCLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVAL---QENVLVML 260 (359)
Q Consensus 186 ~~~~~~~~~~~~~d~~~~s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~ 260 (359)
....+..... ...+.+.|+||.+|.|+. ||+++++++++.++........+. +.....++..++ +...+..+
T Consensus 202 ~~~~s~~~~~-~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~~~~~~~~~--~~~~q~~a~~~l~~~~~~l~~~~ 278 (373)
T PRK07324 202 GSTPSIADLY-EKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRKYRDYTMICA--GVFDDMLASLALEHRDAILERNR 278 (373)
T ss_pred CCCCChhhcc-CCEEEEecchhhcCCccceeEEEecCHHHHHHHHHHhCcEEecC--ChHHHHHHHHHHcCHHHHHHHHH
Confidence 1011122211 112444599999986543 889999999999887766443333 233334444444 34455456
Q ss_pred hhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHH-HhcCceeccCC----CcEEEEEeCCCCC
Q 018240 261 DGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKL-EEHGVLVMPES----STRVRIVVHHQIS 335 (359)
Q Consensus 261 ~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~~----~~~lRi~~~~~~~ 335 (359)
+.+.++++.+.+.|++.+++.+.. |.++.+.|+.++.+ .+..+++++| +++||.+.|+. .+++||+++ .+
T Consensus 279 ~~~~~~~~~l~~~l~~~~~~~~~~-p~gg~~~~i~~~~~--~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~--~~ 353 (373)
T PRK07324 279 KIVRTNLAILDEWVAKEPRVSYVK-PKAVSTSFVKLDVD--MPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYC--CD 353 (373)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEC-CCceEEEEEEeCCC--CCHHHHHHHHHHhcCEEEECccccCCCCeEEEEec--CC
Confidence 667788889999998887777643 45677778777642 3677888887 78899998874 468999995 57
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 018240 336 ANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 336 ~~~i~~~~~~l~~~~~~~ 353 (359)
++.+++.+++|.++++++
T Consensus 354 ~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 354 TETLKKGLKKLSEFLREF 371 (373)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 899999999999988764
No 27
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.1e-32 Score=245.48 Aligned_cols=323 Identities=16% Similarity=0.143 Sum_probs=232.8
Q ss_pred cccccccCCCCCChH-HHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHh----CC--C-C-eE-EcCCchHHHHHHH
Q 018240 3 TRTVDLRSDTVTKPT-EAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVM----GK--E-A-GL-FVPSGTMGNLISV 70 (359)
Q Consensus 3 ~~~id~~~~~~~~~~-~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~----~~--~-~-~~-~~~~gt~a~~~~l 70 (359)
...|+|+.+++..+. +.+.+++.+.... ...|++.++..++++++++++ |. + . .+ +++||++++..++
T Consensus 32 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~ 111 (389)
T PRK08068 32 HDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELP 111 (389)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHH
Confidence 356899998877654 6778887764432 234766778899999999997 42 2 2 34 5555566777766
Q ss_pred HHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccC
Q 018240 71 LVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHAN 148 (359)
Q Consensus 71 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ 148 (359)
..++ ++||.|++++|+|..... .++..|++++.++.+. ++.+|++++++.++ .++++|++++| ||
T Consensus 112 ~~~~-~~gd~vlv~~P~y~~~~~---~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~--------~~~~~v~l~~P-~N 178 (389)
T PRK08068 112 QCLM-NPGDTILVPDPGYPDYLS---GVALARAQFETMPLIAENNFLPDYTKIPEEVA--------EKAKLMYLNYP-NN 178 (389)
T ss_pred HHhC-CCCCEEEEcCCCCcchHH---HHHhcCCEEEEeecccccCCCCCHHHHHHhcc--------ccceEEEEECC-CC
Confidence 7666 599999999999766443 3778899999998753 35679999999887 67889999655 67
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc---hhHhhhcCc-c-EEEEeccccCCCcee--eEEecCH
Q 018240 149 CGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV---PVRRLVQAA-D-SASVCLSKGLGAPVG--SVIVGSK 221 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~---~~~~~~~~~-d-~~~~s~~K~~g~~~g--g~~~~~~ 221 (359)
|||.+++.+++++|.++|++|+++||+||+|.... +.+. +........ . +++.|+||.||.|+- ||+++++
T Consensus 179 PTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~--~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~ 256 (389)
T PRK08068 179 PTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIG--FDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNE 256 (389)
T ss_pred CCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhc--cCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCH
Confidence 99999999999999999999999999999964322 2221 211211111 2 445599999986543 8999999
Q ss_pred HHHHHHHHHHHhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEecc
Q 018240 222 EFIKKARRLRKTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITE 298 (359)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 298 (359)
++++.+......+..+. ++..+.++...+ ..+.+..++++.++++.+.+.|+++ |+.+. ++.++.++|+.++.
T Consensus 257 ~l~~~l~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-~~~g~~~~~v~~~~ 332 (389)
T PRK08068 257 SVIEAINLLQDHLFVSL--FGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREI-GWEVD-APKGSFFAWMPVPK 332 (389)
T ss_pred HHHHHHHHHHhhccCCC--ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCeeEEEEEECCC
Confidence 99999887766554333 333333333333 2444556777888899999999998 87753 44567778999875
Q ss_pred chHHHHHHHHHHHH-hcCceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018240 299 DSKLYAACLLKKLE-EHGVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 299 ~~~~~~~~~~~~l~-~~gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
. .+..++.++|. ++||.+.|+ +..++||+++ .+++.+...+++|++
T Consensus 333 ~--~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~ 385 (389)
T PRK08068 333 G--YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLL--TDEERLREAVERIGK 385 (389)
T ss_pred C--CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEc--CCHHHHHHHHHHHHH
Confidence 2 46788999995 579999775 2468999995 567777777777764
No 28
>PLN02483 serine palmitoyltransferase
Probab=100.00 E-value=1.6e-32 Score=248.28 Aligned_cols=336 Identities=17% Similarity=0.155 Sum_probs=242.0
Q ss_pred cccccccCCCCCCh-------HHHHHHHHHcCCCC----CCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSDTVTKP-------TEAMRAAMASAEVD----DDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~~~~~~-------~~~~~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~ 71 (359)
++.+||+|.++.+- .+.+.+++.+.-.+ ...|+..+.+.++|+.+++++|.+.++++++|..++..++.
T Consensus 100 ~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~~ai~~~~G~~an~~~i~ 179 (489)
T PLN02483 100 RRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKPAAIVFGMGYATNSTIIP 179 (489)
T ss_pred ceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH
Confidence 45688888876522 26788887775332 22377788999999999999999999999999999998888
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCC----CccCCceeEEEEecccc
Q 018240 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKG----EIVYPTTRLICLENTHA 147 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~----~~~~~~~~~v~i~~~~~ 147 (359)
+++ ++||.|++++++|.+... + ++..|++++.++.+ |.+++++.+++... ..+.+..+++++.....
T Consensus 180 al~-~~Gd~Vi~d~~~h~s~~~-~--~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~ 250 (489)
T PLN02483 180 ALI-GKGGLIISDSLNHNSIVN-G--ARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIY 250 (489)
T ss_pred HhC-CCCCEEEEcchhhHHHHH-H--HHHcCCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCCC
Confidence 887 599999999999999775 3 78889999999865 67777777653210 11112235444434444
Q ss_pred CCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh----cCccEEEEeccccCCCceeeEEecCHHH
Q 018240 148 NCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV----QAADSASVCLSKGLGAPVGSVIVGSKEF 223 (359)
Q Consensus 148 ~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~----~~~d~~~~s~~K~~g~~~gg~~~~~~~~ 223 (359)
+++|.+.+ +++|.++|++||+++|+||+|+.+..+..+....++. .+.|+++.|+||.||+ .|||+++++++
T Consensus 251 s~~G~~~~---l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~-~GG~i~~~~~l 326 (489)
T PLN02483 251 SMEGELCK---LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGS-CGGYIAGSKEL 326 (489)
T ss_pred CCCCcccC---HHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhccc-CceEEEcCHHH
Confidence 48898776 8999999999999999999998765543343333321 3567888899999986 67899999999
Q ss_pred HHHHHHHHHhhCCCcchhHHHHHHHHHHHHH--------hHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEE
Q 018240 224 IKKARRLRKTLGGGMRQVGVLCAAALVALQE--------NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFE 295 (359)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~ 295 (359)
++.++............++.....+..+++. ...++++++.++++++++.|+++ |+.+.. +..++++++.
T Consensus 327 i~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v~~-~~~sp~~~l~ 404 (489)
T PLN02483 327 IQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM-GFEVLG-DNDSPVMPIM 404 (489)
T ss_pred HHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC-CCcccC-CCCCCEEEEE
Confidence 9998765432211111222233333344421 12235677889999999999998 887643 3456777776
Q ss_pred eccchHHHHHHHHHHHHhcCceeccC-------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 296 ITEDSKLYAACLLKKLEEHGVLVMPE-------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 296 ~~~~~~~~~~~~~~~l~~~gi~~~~~-------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
+..+ .+..++.++|.++||.+++. ....+|++++..++++++++++++|+++++.+..
T Consensus 405 l~~~--~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~~ 469 (489)
T PLN02483 405 LYNP--AKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVGI 469 (489)
T ss_pred ECCH--HHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 6542 35668999998899998632 2367999999889999999999999999887653
No 29
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.4e-33 Score=246.91 Aligned_cols=333 Identities=14% Similarity=0.122 Sum_probs=237.0
Q ss_pred ccccccCCCCCCh-HHHHHHHHHcCCC--CCCccCCChHHHHHHHHHHHHh----CCC----C-eEEcCCchH-HHHHHH
Q 018240 4 RTVDLRSDTVTKP-TEAMRAAMASAEV--DDDVLMHDPTAFRLETEMAKVM----GKE----A-GLFVPSGTM-GNLISV 70 (359)
Q Consensus 4 ~~id~~~~~~~~~-~~~~~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~----~~~----~-~~~~~~gt~-a~~~~l 70 (359)
..|||..+.+..+ .+.+.+++.+... ....|.. ++...+++.+++++ |.+ . .+++++|++ ++..++
T Consensus 45 ~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~ 123 (410)
T PRK06290 45 ELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLP 123 (410)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHH
Confidence 4689998876643 4777777765322 1233553 77899999999986 432 2 477777765 555555
Q ss_pred HHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccC
Q 018240 71 LVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHAN 148 (359)
Q Consensus 71 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ 148 (359)
..++ ++||.|+++.|+|.. +. ..++..|++++.++.++ ++.+|++++++.+. .++++|++++| ||
T Consensus 124 ~~~~-~~gd~Vlv~~P~y~~-~~--~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~--------~~~k~i~l~nP-~N 190 (410)
T PRK06290 124 SCFI-NPGDVTLMTVPGYPV-TG--THTKYYGGEVYNLPLLEENNFLPDLDSIPKDIK--------EKAKLLYLNYP-NN 190 (410)
T ss_pred HHhC-CCCCEEEEeCCCCcc-HH--HHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhc--------ccceEEEEECC-CC
Confidence 5555 699999999999765 43 34778899999998764 35679999998887 67899999654 77
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhc--CccEEEEeccccCCCcee--eEEecCHHHH
Q 018240 149 CGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQ--AADSASVCLSKGLGAPVG--SVIVGSKEFI 224 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~--~~d~~~~s~~K~~g~~~g--g~~~~~~~~~ 224 (359)
|||.+++.+++++|.++|++||++||+||+|....+.....+...+.. ...+++.|+||.+|.|+. ||++++++++
T Consensus 191 PTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~ 270 (410)
T PRK06290 191 PTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNELIV 270 (410)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeCHHHH
Confidence 999999999999999999999999999999754322111123323321 223555599999986553 9999999999
Q ss_pred HHHHHHHHhhCCCcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccch--
Q 018240 225 KKARRLRKTLGGGMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDS-- 300 (359)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-- 300 (359)
+.+.........+. +...+.++...++ .+.+..++++.++++.+.+.|++. |+.+. ++.++.++|+.++...
T Consensus 271 ~~l~~~~~~~~~~~--~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~p~g~f~l~v~lp~~~~~ 346 (410)
T PRK06290 271 KAFATVKDNNDSGQ--FIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV-GFKAE-MPGGTFYLYVKAPKGTKS 346 (410)
T ss_pred HHHHHHHhccccCC--cHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CCCeeeEEEEECCCcccc
Confidence 98877665554443 2233444444553 344546777888899999999998 88764 3446777888887521
Q ss_pred ---HHHHHHHHHHHHhcC-ceeccCCC--cEEEEEeC-CCCCHHHHHHHHHHHHHHHHHHH
Q 018240 301 ---KLYAACLLKKLEEHG-VLVMPESS--TRVRIVVH-HQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 301 ---~~~~~~~~~~l~~~g-i~~~~~~~--~~lRi~~~-~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
..+..++.++|.++| +.++|++. +++||++. ...++++.++++++|++.+.++.
T Consensus 347 ~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 347 GIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDVE 407 (410)
T ss_pred CCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHHHhhcc
Confidence 025778999996654 55567543 48999973 33578999999999999987764
No 30
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=1.2e-32 Score=245.67 Aligned_cols=325 Identities=17% Similarity=0.147 Sum_probs=231.2
Q ss_pred cccccccCCCCCCh-HHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHh----CCC----C-eEEcCCc-hHHHHHHHH
Q 018240 3 TRTVDLRSDTVTKP-TEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVM----GKE----A-GLFVPSG-TMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~~----~-~~~~~~g-t~a~~~~l~ 71 (359)
...|+|..+.+..+ .+.+.+++.+.......|+...+..++++.+++++ |.+ . .+++++| ++++..++.
T Consensus 29 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~ 108 (396)
T PRK09147 29 LPPISLSIGEPKHPTPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQ 108 (396)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHH
Confidence 35789988776644 57888888775444455777777889999999876 643 2 4555555 566666667
Q ss_pred Hhhhhc---CCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018240 72 VHCETR---GSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 72 ~~~~~~---g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
.++ ++ |+.|+++.|+|.. +. ..+...|.+++.++.+. ++.+|++.+++.+. +++++++++ .+
T Consensus 109 ~l~-~~~~~gd~vlv~~P~y~~-~~--~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~--------~~~k~i~l~-nP 175 (396)
T PRK09147 109 TVI-DRDGPGPLVVCPNPFYQI-YE--GAALLAGAEPYFLNCDPANNFAPDFDAVPAEVW--------ARTQLLFVC-SP 175 (396)
T ss_pred HHc-CCCCCCCEEEEcCCCccc-hH--HHHHhcCCEEEEeccCccccCccCHHHHHHHHh--------hccEEEEEc-CC
Confidence 666 57 8899999999655 44 34778899999997753 36789999998887 678999985 56
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh------h-cCcc-EEE-EeccccCCCcee--e
Q 018240 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL------V-QAAD-SAS-VCLSKGLGAPVG--S 215 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~------~-~~~d-~~~-~s~~K~~g~~~g--g 215 (359)
+||||.+++.+++++|.++|++|+++||+||+|....+.........+ . ...+ +++ .|+||.++.|+. |
T Consensus 176 ~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG 255 (396)
T PRK09147 176 GNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSG 255 (396)
T ss_pred CCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceee
Confidence 779999999999999999999999999999996543221100111111 0 0112 444 499998876543 8
Q ss_pred EEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHH--HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEE
Q 018240 216 VIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVAL--QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVY 293 (359)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~ 293 (359)
|+++++++++.+.......+.+. +...+.++...+ ..++.+.++.+.++++.+.+.|++. +.+ ..+..++++|
T Consensus 256 ~~~~~~~l~~~~~~~~~~~~~~~--~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~~-~~p~~g~f~~ 330 (396)
T PRK09147 256 FVAGDAALLKKFLLYRTYHGCAM--PPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV--LDV-QLPDAGFYLW 330 (396)
T ss_pred eecCCHHHHHHHHHHhhhcccCC--CHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh--cCC-CCCCeeEEEE
Confidence 99999999998876665444433 333333433334 3445556677788888888888874 443 2356899999
Q ss_pred EEeccchHHHHHHHHHHH-HhcCceeccCC------------CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 294 FEITEDSKLYAACLLKKL-EEHGVLVMPES------------STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 294 ~~~~~~~~~~~~~~~~~l-~~~gi~~~~~~------------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
++++. +..++.+.| +++||.+.|+. .+++||+++ .+++++++++++|.++++
T Consensus 331 ~~~~~----~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~--~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 331 AKVPG----DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALV--APLAECVEAAERIVDFCR 395 (396)
T ss_pred EECCC----CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHhc
Confidence 99873 456787887 67899997652 467999995 568899999999988763
No 31
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=7.4e-33 Score=245.76 Aligned_cols=326 Identities=16% Similarity=0.127 Sum_probs=230.3
Q ss_pred ccccccCCCCCCh-HHHHHHHHHcCCC-CCCccCCChHHHHHHHHHHHH----hCCC-----CeEEcCCchHHHHHHHHH
Q 018240 4 RTVDLRSDTVTKP-TEAMRAAMASAEV-DDDVLMHDPTAFRLETEMAKV----MGKE-----AGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 4 ~~id~~~~~~~~~-~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~----~~~~-----~~~~~~~gt~a~~~~l~~ 72 (359)
.+|+|..+.+..+ .+.+.+++.+... ....|++.++..++++.++++ +|.+ ..++++||++++..++.+
T Consensus 30 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~ 109 (384)
T PRK12414 30 DALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISA 109 (384)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHH
Confidence 4688988766544 5778887766432 234577767777888777765 4753 346777777888888888
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018240 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
++ .+||+|++++|+|.. +. ..++..|.+++.++.+ +++.+|++.|++.++ +++++|+++ .++||||
T Consensus 110 l~-~~gd~Vlv~~p~y~~-~~--~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~--------~~~~~v~i~-~p~NPTG 176 (384)
T PRK12414 110 LV-HPGDEVIYFEPSFDS-YA--PIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT--------PRTRMIIVN-TPHNPSA 176 (384)
T ss_pred hc-CCCCEEEEeCCCccc-hH--HHHHHcCCEEEEEecCccccccCHHHHHhhcC--------cccEEEEEc-CCCCCCC
Confidence 87 599999999999765 43 3467778899888765 356789999999987 678999885 5577999
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhcCc-c-EEEEeccccCCCcee--eEEecCHHHHHH
Q 018240 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQAA-D-SASVCLSKGLGAPVG--SVIVGSKEFIKK 226 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~~~-d-~~~~s~~K~~g~~~g--g~~~~~~~~~~~ 226 (359)
.+++.+++++|+++|++||+++|+|++|....+.. ...+...+.... . +++.|+||.||.|+. ||+++++++++.
T Consensus 177 ~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~ 256 (384)
T PRK12414 177 TVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDE 256 (384)
T ss_pred cCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHHH
Confidence 99999999999999999999999999975432211 011122221112 2 444499999986543 999999999998
Q ss_pred HHHHHHhhCCCcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHH
Q 018240 227 ARRLRKTLGGGMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYA 304 (359)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (359)
+.........+. +...+.++...++ ....+.++.+.++++.+.+.|++. |+.+. ++.++.++|+.++.....+.
T Consensus 257 l~~~~~~~~~~~--s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~gg~~~~~~~~~~~~~~~ 332 (384)
T PRK12414 257 IRKVHQFMVFSA--DTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS-RFELL-PSEGSFFMLARFRHFSDESD 332 (384)
T ss_pred HHHHHhheecCC--CcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CCCcceEEEEcccccCCCCH
Confidence 887765544443 3334444444443 222235667888899999999998 87764 44567778887753111133
Q ss_pred HHHH-HHHHhcCceeccCC--------CcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018240 305 ACLL-KKLEEHGVLVMPES--------STRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 305 ~~~~-~~l~~~gi~~~~~~--------~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
.++. +.|.++||.+.|+. .+++||+++ .+++++++.+++|.+
T Consensus 333 ~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~--~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 333 SDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFS--KDDATLVEGARRLCS 383 (384)
T ss_pred HHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 4555 55688999997753 357999996 478999999988864
No 32
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=7.6e-33 Score=247.41 Aligned_cols=332 Identities=15% Similarity=0.182 Sum_probs=236.4
Q ss_pred cccccccCCCC-CCh-HHHHHHHHHcCCCC-CCcc-------CCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSDTV-TKP-TEAMRAAMASAEVD-DDVL-------MHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~~-~~~-~~~~~~a~~~~~~~-~~~~-------~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~ 72 (359)
.++|||.++++ ..+ +|++.+++.++... ...| +..+...++|+.+++++|.+..++++||++|+..++.+
T Consensus 38 ~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~~~~ii~~~~~~a~~~~~~~ 117 (393)
T TIGR01822 38 REVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGTEDTILYASCFDANGGLFET 117 (393)
T ss_pred ceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEECchHHHHHHHHHH
Confidence 35699999986 333 47777777654432 1122 22455689999999999999889999999999988888
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018240 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
++ ++||.|++++++|.+... + +.+.+.+.+.+.. +|++++++.+++... ...++++|++++++ ||||.
T Consensus 118 l~-~~gd~vi~~~~~~~s~~~-~--~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~--~~~~~~~v~~~~v~-~~tG~ 185 (393)
T TIGR01822 118 LL-GAEDAIISDALNHASIID-G--VRLCKAKRYRYAN-----NDMADLEAQLKEARA--AGARHRLIATDGVF-SMDGV 185 (393)
T ss_pred hC-CCCCEEEEeccccHHHHH-H--HHhcCCceEEeCC-----CCHHHHHHHHHhhhh--cCCCceEEEEeCCc-cCCCC
Confidence 87 699999999999988765 2 4555656554432 599999999884211 01278888886665 49999
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh---hcCccEEEEeccccCCCceeeEEecCHHHHHHHHH
Q 018240 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL---VQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARR 229 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~ 229 (359)
+.+ +++|+++|++||+++|+|++|+++.....+....+. ..+.|+++.|+||+++++.+||+++++++.+.++.
T Consensus 186 ~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r~G~~~~~~~~~~~l~~ 262 (393)
T TIGR01822 186 IAP---LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGASGGFTTARKEVVELLRQ 262 (393)
T ss_pred cCC---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCCcEEEEeCHHHHHHHHH
Confidence 877 899999999999999999998776654333322222 22567888899999987677999999999988765
Q ss_pred HHHhhCCCcchhHHHHHHHHHHHHHh--HHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHH
Q 018240 230 LRKTLGGGMRQVGVLCAAALVALQEN--VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACL 307 (359)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (359)
....+......++...+++..+++.. .++.++++.++++++.+.|++. |+++. +..++++.+.+.. ..+..++
T Consensus 263 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~i~~~~--~~~~~~l 337 (393)
T TIGR01822 263 RSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA-GFDIK--PADHPIIPVMLYD--AVLAQRF 337 (393)
T ss_pred hCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC--CCCCCEEEEEeCC--HHHHHHH
Confidence 43222111112333333444454322 2336677888999999999887 87763 2245566665543 2467889
Q ss_pred HHHHHhcCceecc-------CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 308 LKKLEEHGVLVMP-------ESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 308 ~~~l~~~gi~~~~-------~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
.+.|.++||.+.. .+...+|++++..++++++++++++|+++++++.
T Consensus 338 ~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~~ 391 (393)
T TIGR01822 338 ARRLLEEGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGRELG 391 (393)
T ss_pred HHHHHHCCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHhC
Confidence 9999888998842 2335699999999999999999999999877653
No 33
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=1.7e-32 Score=245.62 Aligned_cols=333 Identities=15% Similarity=0.114 Sum_probs=237.0
Q ss_pred cccccccCCCCC-----ChHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhCC------------C-C-eEEcCC
Q 018240 3 TRTVDLRSDTVT-----KPTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMGK------------E-A-GLFVPS 61 (359)
Q Consensus 3 ~~~id~~~~~~~-----~~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~~------------~-~-~~~~~~ 61 (359)
..+|+|..+.+. .|.+.+.+++.+.... ...|+...+..++++.++++++. + . .++++|
T Consensus 33 ~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G 112 (412)
T PTZ00433 33 KSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSG 112 (412)
T ss_pred CCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCC
Confidence 456899998775 4668888888775432 34577667889999999999863 1 1 245555
Q ss_pred chHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeE
Q 018240 62 GTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRL 139 (359)
Q Consensus 62 gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 139 (359)
+++++..++..++ ++||+|+++.|+|.... ..++..|++++.++.+ .++.+|++++++.++ +++++
T Consensus 113 ~~~al~~~~~~~~-~~gd~vlv~~P~y~~~~---~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~--------~~~~~ 180 (412)
T PTZ00433 113 VSHAILMALTALC-DEGDNILVPAPGFPHYE---TVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVD--------DRTKA 180 (412)
T ss_pred hHHHHHHHHHHhc-CCCCEEEEccCCcccHH---HHHHHcCCEEEEEecCccccCcCCHHHHHHHhc--------cCceE
Confidence 5677777777776 59999999999976644 3477889899888764 357889999999888 67889
Q ss_pred EEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhcCccEEEE-eccccCCCcee--e
Q 018240 140 ICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQAADSASV-CLSKGLGAPVG--S 215 (359)
Q Consensus 140 v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~~~d~~~~-s~~K~~g~~~g--g 215 (359)
|++++ +|||||.+++.+++++|.++|+++|++||+||+|....+.. ...+...+....+++++ |+||.||.|+- |
T Consensus 181 i~~~~-p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG 259 (412)
T PTZ00433 181 LIMTN-PSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLG 259 (412)
T ss_pred EEEeC-CCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEE
Confidence 98855 46699999999999999999999999999999964322211 01122333222234544 99999976543 8
Q ss_pred EEec------CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecC
Q 018240 216 VIVG------SKEFIKKARRLRKTLGGGMRQVGVLCAAALVAL----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVD 285 (359)
Q Consensus 216 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~ 285 (359)
|++. .+++++.++..... ..+. +.+.+.++...+ +.+.++.++++.++++.+.+.|++..++.+. .
T Consensus 260 ~~i~~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~ 335 (412)
T PTZ00433 260 WLLLVDPHGNGGDFLDGMKRLGML-VCGP--CSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPT-M 335 (412)
T ss_pred EEEEeCCcccHHHHHHHHHHHhhc-cCCC--ChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc-C
Confidence 8875 24566666554332 1222 344444444444 3455556677888899999999886577653 4
Q ss_pred CccceEEEEEeccch--H-HHHHHHHHHHH-hcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 286 AVETNIVYFEITEDS--K-LYAACLLKKLE-EHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 286 ~~~~~~~~~~~~~~~--~-~~~~~~~~~l~-~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+.+++++|+.++... + .+..++.+.|. ++||.+.++. .+++|++++ ..++++++.+++|.++++...
T Consensus 336 p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 336 PRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTIS--RPVEVLREAVERIKAFCERHK 410 (412)
T ss_pred CCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhc
Confidence 557889999986410 0 14578888885 6899998864 458999995 568899999999999887654
No 34
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=100.00 E-value=1.5e-32 Score=242.88 Aligned_cols=334 Identities=15% Similarity=0.210 Sum_probs=239.5
Q ss_pred ccccCCCCCChH--HHHHHHHHcCCCC--------CCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018240 6 VDLRSDTVTKPT--EAMRAAMASAEVD--------DDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 6 id~~~~~~~~~~--~~~~~a~~~~~~~--------~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
+||.+.++.+-. |+++++..++... ...|+....+.+||+++++++|.+.++++++|+.++..++.++.
T Consensus 1 ~~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l~- 79 (392)
T PLN03227 1 LNFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTESAILYSDGASTTSSTVAAFA- 79 (392)
T ss_pred CCCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHhC-
Confidence 588888776444 7777776664422 22467778899999999999999999999999999999998887
Q ss_pred hcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCC------ccCCceeEEEEeccccCC
Q 018240 76 TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGE------IVYPTTRLICLENTHANC 149 (359)
Q Consensus 76 ~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~------~~~~~~~~v~i~~~~~~p 149 (359)
++||.|+++++.|.+.+. + +.+.+.+++.++++ |.+++++.++..... ...+++++|+++++.+ |
T Consensus 80 ~~GD~Vl~~~~~h~s~~~-~--~~l~~~~~~~~~~~-----d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~-~ 150 (392)
T PLN03227 80 KRGDLLVVDRGVNEALLV-G--VSLSRANVRWFRHN-----DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYK-N 150 (392)
T ss_pred CCCCEEEEeccccHHHHH-H--HHHcCCeEEEeCCC-----CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcC-C
Confidence 699999999999999876 3 46666677777665 555555544321100 0114688999988765 9
Q ss_pred CceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh-----hcCccEEEEeccccCCCceeeEEecCHHHH
Q 018240 150 GGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL-----VQAADSASVCLSKGLGAPVGSVIVGSKEFI 224 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-----~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~ 224 (359)
+|.+.| +++++++|++||+++|+||+|+++..+..|....+. ..++|+++.|++|.+| +.||+++++++++
T Consensus 151 ~G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-~~gg~v~~~~~~~ 226 (392)
T PLN03227 151 TGTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-SVGGMTVGSEEVV 226 (392)
T ss_pred CCcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh-ccCcEEecCHHHH
Confidence 999988 789999999999999999999876655444333332 1256999999999887 6888888998888
Q ss_pred HHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH--HHHhhhHHHHHHHHHHHHhcCCCceEe---------cCCccceEEE
Q 018240 225 KKARRLRKTLGGGMRQVGVLCAAALVALQENV--LVMLDGDHKKAKLLAEGLNQLKGLRVD---------VDAVETNIVY 293 (359)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~l~~~~g~~~~---------~~~~~~~~~~ 293 (359)
+.++........+.+.++..++++..++.... ++.+++..++.+++++.|++. ++... .....++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~~~~~~~~~i~~ 305 (392)
T PLN03227 227 DHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNS-SHPYALKLRNRLVITSDPISPIIY 305 (392)
T ss_pred HHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCccccccccccccCCCCCCCEEE
Confidence 77654322222222224556666665664322 247778889999999999863 33211 1123577888
Q ss_pred EEeccchH-------HHHHHHHHHHHhcCceeccC-----------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 294 FEITEDSK-------LYAACLLKKLEEHGVLVMPE-----------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 294 ~~~~~~~~-------~~~~~~~~~l~~~gi~~~~~-----------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+.+.+... ....++.+.|.++|+.+.+. .+..+|++++..+|++|+++++++|+++++++.
T Consensus 306 i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 306 LRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAIL 384 (392)
T ss_pred EEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 88855210 01358888999999988431 245689999999999999999999999998764
No 35
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=1.9e-32 Score=243.66 Aligned_cols=325 Identities=18% Similarity=0.199 Sum_probs=232.7
Q ss_pred cccccccCCCCCCh-HHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhC----C--C--CeEEcCC-chHHHHHHH
Q 018240 3 TRTVDLRSDTVTKP-TEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMG----K--E--AGLFVPS-GTMGNLISV 70 (359)
Q Consensus 3 ~~~id~~~~~~~~~-~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~----~--~--~~~~~~~-gt~a~~~~l 70 (359)
...+||..+.+..+ .+.+.+++.+.... ...|+...+..++++.++++++ . + ..+++++ +++++..++
T Consensus 29 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~ 108 (383)
T TIGR03540 29 VDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIP 108 (383)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHH
Confidence 35689998877644 47777777764322 2346666678899999999874 3 1 2355554 556666777
Q ss_pred HHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccC
Q 018240 71 LVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHAN 148 (359)
Q Consensus 71 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ 148 (359)
..++ ++||.|++++|+|..... .+...|.+++.++.+. ++.+|++++++.+. +++++|++++| +|
T Consensus 109 ~~~~-~~gd~vlv~~P~y~~~~~---~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~--------~~~~~v~i~~P-~N 175 (383)
T TIGR03540 109 LAFV-NPGDIVLVPDPGYPVYRI---GTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA--------KKAKLMFINYP-NN 175 (383)
T ss_pred HHhC-CCCCEEEEeCCCCcchHH---HHHhcCCEEEEEecCcccCCccCHHHHHhhcc--------ccceEEEEeCC-CC
Confidence 6666 699999999999766443 3778899999997753 35579999998887 67899999655 67
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhcCcc--EEEEeccccCCCcee--eEEecCHHH
Q 018240 149 CGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQAAD--SASVCLSKGLGAPVG--SVIVGSKEF 223 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~~~d--~~~~s~~K~~g~~~g--g~~~~~~~~ 223 (359)
|||.+++.+++++|+++|++||++||+||+|....+.. ...+...+....+ ++..|+||.||.|+. ||+++++++
T Consensus 176 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l 255 (383)
T TIGR03540 176 PTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADL 255 (383)
T ss_pred CcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHHH
Confidence 99999999999999999999999999999975432211 1122222221112 444599999986543 899999999
Q ss_pred HHHHHHHHHhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccch
Q 018240 224 IKKARRLRKTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDS 300 (359)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 300 (359)
++.+.........+.+ ...+.++...+ ..+.++.++.+.++++.+.+.|++. ++.+. ++..+.++|+.++..
T Consensus 256 ~~~~~~~~~~~~~~~~--~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~~~~~~~~~~~l~~~- 330 (383)
T TIGR03540 256 IAGLGKVKTNVDSGVF--QAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKI-GIDVE-KPKATFYVWVPVPEG- 330 (383)
T ss_pred HHHHHHHHHhcccCCC--hHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEec-CCCcceEEEEECCCC-
Confidence 9988776655444442 23344444444 3445556667888899999999998 88774 344677899998752
Q ss_pred HHHHHHHHHHH-HhcCceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018240 301 KLYAACLLKKL-EEHGVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 301 ~~~~~~~~~~l-~~~gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
.+..++.++| .++||.+.++ +.+++|++++ .+++++++.+++|.+
T Consensus 331 -~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 331 -YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLT--VPDERLEEAVARIKK 382 (383)
T ss_pred -CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEec--CCHHHHHHHHHHHhh
Confidence 5678899887 6899999775 2468999995 677888888777753
No 36
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=3.2e-32 Score=249.74 Aligned_cols=330 Identities=14% Similarity=0.122 Sum_probs=227.0
Q ss_pred ccccccCCCC---CC-hHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHh------CCC-CeEEcCCc-hHHHHHHHH
Q 018240 4 RTVDLRSDTV---TK-PTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVM------GKE-AGLFVPSG-TMGNLISVL 71 (359)
Q Consensus 4 ~~id~~~~~~---~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~-~~~~~~~g-t~a~~~~l~ 71 (359)
.+|+|+.+++ .. +++.+.+++.+.......|+...+..++++++++++ +.+ ..+++++| ++++..++.
T Consensus 147 ~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~ 226 (517)
T PRK13355 147 HILKLNIGNPAPFGFRTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMS 226 (517)
T ss_pred CeEEecCcCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHH
Confidence 5688998766 23 346777777665444456888888999999999998 332 23655555 556667777
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC
Q 018240 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC 149 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p 149 (359)
+++ ++||+|++++|+|.. +. ..+...|.+++.++.+ .++.+|++++++.++ +++++|++++| |||
T Consensus 227 ~l~-~~Gd~Vli~~P~y~~-y~--~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~--------~~~k~i~i~nP-~NP 293 (517)
T PRK13355 227 ALL-DDGDEVLIPSPDYPL-WT--ACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKIT--------SRTKAIVIINP-NNP 293 (517)
T ss_pred HhC-CCCCEEEEcCCCCcC-HH--HHHHHCCCEEEEeecCcccCCCCCHHHHHHhcC--------cCceEEEEECC-CCC
Confidence 776 699999999999765 44 3477888899888654 347899999999988 78999998665 679
Q ss_pred CceecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhcCccEEEE-eccccCCCcee--eEEe--cCHHH
Q 018240 150 GGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQAADSASV-CLSKGLGAPVG--SVIV--GSKEF 223 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~~~d~~~~-s~~K~~g~~~g--g~~~--~~~~~ 223 (359)
||.+++.+++++|+++|++||++||+||+|....+.. ...+...+.....++++ |+||.++.++. ||++ +++++
T Consensus 294 TG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~ 373 (517)
T PRK13355 294 TGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRI 373 (517)
T ss_pred CCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhh
Confidence 9999999999999999999999999999964322211 11233333222224444 99999987654 8887 44544
Q ss_pred H----HHHHHHHHhhCCCcchhHHHHHHHHHHHH------HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEE
Q 018240 224 I----KKARRLRKTLGGGMRQVGVLCAAALVALQ------ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVY 293 (359)
Q Consensus 224 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~ 293 (359)
. +.+.... ....+. +...+.++..++. ..... ..+..++++++.+.|+++||+++. ++.++.++|
T Consensus 374 ~~~~~~~l~~~~-~~~~~~--~~~~q~a~~~aL~~~~~~~~~~~~-~~~~~~~r~~l~~~L~~~~g~~~~-~p~g~fy~~ 448 (517)
T PRK13355 374 AKDYIEGLNMLA-NMRLCS--NVPAQSIVQTALGGHQSVKDYLVP-GGRVYEQRELVYNALNAIPGISAV-KPKAAFYIF 448 (517)
T ss_pred HHHHHHHHHHHh-cCcCCc--ChHHHHHHHHHhcCCccHHHHHHH-HHHHHHHHHHHHHHHhcCCCcccC-CCCeeeEEE
Confidence 3 3332221 111222 3334444444442 23331 234456678999999998898874 455777788
Q ss_pred EEeccch--HHHHHHHH-HHHHhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 294 FEITEDS--KLYAACLL-KKLEEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 294 ~~~~~~~--~~~~~~~~-~~l~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
++++... ..+..+++ +.|.++||.+.|+. .+++|+++ ..+++++++.+++|.++++.+
T Consensus 449 ~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~--~~~~~~l~~a~~rl~~~~~~~ 515 (517)
T PRK13355 449 PKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVY--LPRLEDLEDAMDRLADFFSYY 515 (517)
T ss_pred eecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEe--CCCHHHHHHHHHHHHHHHHHh
Confidence 8876310 01233444 45689999997763 56899999 578999999999999998765
No 37
>PLN02955 8-amino-7-oxononanoate synthase
Probab=100.00 E-value=1.3e-32 Score=241.37 Aligned_cols=323 Identities=17% Similarity=0.160 Sum_probs=250.1
Q ss_pred cccccccCCCCCChH--HHHHHHHHcCCCC--------CCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSDTVTKPT--EAMRAAMASAEVD--------DDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~~~~~~--~~~~~a~~~~~~~--------~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~ 72 (359)
.+.++|.|++|.+-. |+++++..++... ...++..+.+.++|+++++++|.+.++++++|..|+..++.+
T Consensus 102 r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i~a 181 (476)
T PLN02955 102 KKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKEDCLVCPTGFAANMAAMVA 181 (476)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCcEEEECChHHHHHHHHHH
Confidence 467999999887554 7777777664322 123556778899999999999999999999999999999988
Q ss_pred hh-------------hhcCCeEEecCCCcceeeccccccccC----CccceeeecCCCCCCCHHHHHHHhcCCCCCccCC
Q 018240 73 HC-------------ETRGSEVILGDNSHIHIYENGGISTIG----GVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYP 135 (359)
Q Consensus 73 ~~-------------~~~g~~vl~~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~ 135 (359)
+. ..+++.|+.+...|.+.+. + +++. +++++.++++ |++.|++.+++.. .
T Consensus 182 L~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~d-G--~~ls~~~~~a~~~~f~HN-----D~~~Le~~L~~~~-----~ 248 (476)
T PLN02955 182 IGSVASLLAASGKPLKNEKVAIFSDALNHASIID-G--VRLAERQGNVEVFVYRHC-----DMYHLNSLLSSCK-----M 248 (476)
T ss_pred HhhccccccccccccCCCCcEEEEeccchHHHHH-H--HHhccccCCceEEEeCCC-----CHHHHHHHHHhCC-----C
Confidence 73 2356678999999999887 4 4443 5677778887 9999999997532 3
Q ss_pred ceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh---hcCccEEEEeccccCCCc
Q 018240 136 TTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL---VQAADSASVCLSKGLGAP 212 (359)
Q Consensus 136 ~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~~d~~~~s~~K~~g~~ 212 (359)
+.++|++++..+ +.|.+.| +++|.++|++||+++|+||+|++|..+..|....+. ....|+++.|++|.+|.
T Consensus 249 ~~~~Vv~EgV~S-mdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~- 323 (476)
T PLN02955 249 KRKVVVTDSLFS-MDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGC- 323 (476)
T ss_pred CceEEEEeCCCC-CCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhc-
Confidence 457888888887 7899888 899999999999999999999988887665554433 23567888899999985
Q ss_pred eeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH--HHHhhhHHHHHHHHHHHHhcCCCceEecCCccce
Q 018240 213 VGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENV--LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETN 290 (359)
Q Consensus 213 ~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~ 290 (359)
.||++++++++++.++.....+..++..++..++++..+++... ..+++++.++.+++++. . |+.+ .++
T Consensus 324 ~GGfi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~---~-G~~~-----~sP 394 (476)
T PLN02955 324 HGGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKAL---S-GVDI-----SSP 394 (476)
T ss_pred cCceeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh---c-CCCC-----CCC
Confidence 78889999999998887766655555556666666677665332 23556677777777763 2 5543 477
Q ss_pred EEEEEeccchHHHHHHHHHHHHhcCcee-------ccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 291 IVYFEITEDSKLYAACLLKKLEEHGVLV-------MPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~l~~~gi~~-------~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
++.+.+..+ ..+..+.++|.++||.+ +|.+...+||+++..++++|+++++++|.++.....
T Consensus 395 I~pI~ig~~--~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~~ 463 (476)
T PLN02955 395 IISLVVGNQ--EKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFDN 463 (476)
T ss_pred EEEEEeCCH--HHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 888887763 47778999999999998 445667899999999999999999999998876553
No 38
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=3.6e-32 Score=241.96 Aligned_cols=335 Identities=16% Similarity=0.127 Sum_probs=237.3
Q ss_pred cccccccCCCCCCh-HHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHhCC--------C-CeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSDTVTKP-TEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVMGK--------E-AGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~~~~~~-~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~~--------~-~~~~~~~gt~a~~~~l~ 71 (359)
..+|+|..+.+..+ .+.+.+++.+.... ...|+...+..++++.++++++. + ..++++|+++++..++.
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~ 109 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLT 109 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 45789988776644 36677777654332 23476667788999999998742 1 23556666788888888
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC-CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018240 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ-DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
.++ .+||.|++++|+|.... ..++..|.+++.++.+. ++.+|++.+++.+++.. ++++++++++| +|||
T Consensus 110 ~~~-~~gd~vl~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~-----~~~~~i~l~~P-~NPt 179 (391)
T PRK07309 110 AIL-EPGDKVLLPAPAYPGYE---PIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQG-----DKLKAVILNYP-ANPT 179 (391)
T ss_pred Hhc-CCCCEEEEeCCCCcchH---HHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccC-----CCeEEEEEECC-CCCC
Confidence 777 59999999999977743 34778899999887654 35789999999987421 36889999655 6799
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhcCccEEEEeccccCCCcee--eEEecCHHHHHHH
Q 018240 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQAADSASVCLSKGLGAPVG--SVIVGSKEFIKKA 227 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~~~d~~~~s~~K~~g~~~g--g~~~~~~~~~~~~ 227 (359)
|.+++.+++++|+++|++||+++|+|++|....+.. ...+...+....-+++.|+||.||.|+. ||+++++++++.+
T Consensus 180 G~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~ 259 (391)
T PRK07309 180 GVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQL 259 (391)
T ss_pred CcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCHHHHHHH
Confidence 999999999999999999999999999975433211 1122233321112444599999986543 8999999999988
Q ss_pred HHHHHhhCCCcchhHHHHHHHHHHHHHh---HHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHH
Q 018240 228 RRLRKTLGGGMRQVGVLCAAALVALQEN---VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYA 304 (359)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (359)
.........+. +.+.+.++...+++. ....++.+.++++++.+.|++. ++.+. ++..+.++|+.++.....+.
T Consensus 260 ~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~p~gg~~~~~~l~~~~~~~~ 335 (391)
T PRK07309 260 IKSHQYLVTAA--TTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL-GFKII-KPDGAFYIFAKIPAGYNQDS 335 (391)
T ss_pred HHHHhhcccCC--ChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCeeEEEEEECCCCCCCCH
Confidence 76544332222 334444444455432 2224556778888999999988 88764 34567788988764211245
Q ss_pred HHHHHHH-HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 305 ACLLKKL-EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 305 ~~~~~~l-~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.++.+.| .++||.+.|+. ..++|++++ .+.+++++++++|++++++.
T Consensus 336 ~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 336 FKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA--ASMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred HHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHhh
Confidence 6788765 78999997763 468999996 46889999999999988765
No 39
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=1.8e-32 Score=242.65 Aligned_cols=330 Identities=22% Similarity=0.223 Sum_probs=243.2
Q ss_pred ccccccCCCCCCh-----HHHHHHHHHc---CCCCCCccCCChHHHHHHHHHHHHhC--------CCCeEEcCCchHHHH
Q 018240 4 RTVDLRSDTVTKP-----TEAMRAAMAS---AEVDDDVLMHDPTAFRLETEMAKVMG--------KEAGLFVPSGTMGNL 67 (359)
Q Consensus 4 ~~id~~~~~~~~~-----~~~~~~a~~~---~~~~~~~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~~ 67 (359)
.+|||.++.+... .+++.+++.+ .......|+...+..++++.++++++ .+..+++++|+.++.
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 5799999988764 3666666654 22235568888899999999999998 233689999998888
Q ss_pred HHHHHhh-hhcCCeEEecCCCcceeeccccccccCCccceeeec--CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEec
Q 018240 68 ISVLVHC-ETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN--NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLEN 144 (359)
Q Consensus 68 ~~l~~~~-~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~ 144 (359)
..+..++ .++++.|++++|+|..... .++..|.+++.++. ..++.+|+++|++.+++...+. .++++|++++
T Consensus 82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~--~~~~~v~~~~ 156 (363)
T PF00155_consen 82 FLLLRLLKINPGDTVLVPDPCYPSYIE---AARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKG--PRPKAVLICN 156 (363)
T ss_dssp HHHHHHHHSSTTSEEEEEESSSTHHHH---HHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTT--ETEEEEEEES
T ss_pred hhhhhcccccccccceecCCccccccc---cccccCceeeeccccccccccccccccccccccccccc--cccceeeecc
Confidence 8877777 5689999999999887654 47788989888874 3678889999999999532111 1578888855
Q ss_pred cccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc-h-hHhhhcCccEEE-EeccccCCCcee--eEEec
Q 018240 145 THANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV-P-VRRLVQAADSAS-VCLSKGLGAPVG--SVIVG 219 (359)
Q Consensus 145 ~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~-~-~~~~~~~~d~~~-~s~~K~~g~~~g--g~~~~ 219 (359)
+ +||||..++.+++++|+++|++||++||+||+|........+. + ...+....++++ .|+||.||.|+. ||+++
T Consensus 157 p-~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~ 235 (363)
T PF00155_consen 157 P-NNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVA 235 (363)
T ss_dssp S-BTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEE
T ss_pred c-ccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccc
Confidence 5 5699999999999999999999999999999976654432211 1 222223444444 499999987542 88888
Q ss_pred CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEe
Q 018240 220 SKEFIKKARRLRKTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEI 296 (359)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~ 296 (359)
++++++.++.....+..+.. ........+... .++.++.++++.++++++.+.|++. ++.+..++ .+.++|+.+
T Consensus 236 ~~~~~~~l~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~-~~~~~~~~~ 312 (363)
T PF00155_consen 236 PPELIERLRRFQRSGLSSSP-MQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPE-AGFFLWVRL 312 (363)
T ss_dssp EHHHHHHHHHHHHHTTSSHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHS-BSSEEEEEE
T ss_pred hhhhhhhhhhccccccccch-hhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeecc-CccEEEEEc
Confidence 99999998887776555221 111111111111 1255667888889999999999999 99986543 788888888
Q ss_pred ccchHHHHHHHHHHHHhc-CceeccC----CCcEEEEEeCCCCCHHHHHHHHHHH
Q 018240 297 TEDSKLYAACLLKKLEEH-GVLVMPE----SSTRVRIVVHHQISANDVHYTLSCF 346 (359)
Q Consensus 297 ~~~~~~~~~~~~~~l~~~-gi~~~~~----~~~~lRi~~~~~~~~~~i~~~~~~l 346 (359)
+.. +..++.++|.++ ||.+.|+ ..+++|+++ ...+++++++++++|
T Consensus 313 ~~~---~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 313 DPN---DAEELAQELLEEYGILVRPGSYFGVPGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp SHH---HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred ccc---hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe-ccCCHHHHHHHHhhC
Confidence 762 788999999665 9999764 366899999 479999999999886
No 40
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.2e-32 Score=238.53 Aligned_cols=328 Identities=21% Similarity=0.261 Sum_probs=243.9
Q ss_pred ccccccCCCCCChHHHHHHHHHcCC----CC--CCccCC----ChHHHHHHHHHHHHhCCCC--e-EEcCCchHHHHHHH
Q 018240 4 RTVDLRSDTVTKPTEAMRAAMASAE----VD--DDVLMH----DPTAFRLETEMAKVMGKEA--G-LFVPSGTMGNLISV 70 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~----~~--~~~~~~----~~~~~~l~~~la~~~~~~~--~-~~~~~gt~a~~~~l 70 (359)
+.++|.+...+..+..+.+++.+.. .+ ...+.. ....++.|+.+++++|.+. . +++.|.|+++..+.
T Consensus 22 ~~vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va 101 (405)
T COG0520 22 PLVYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVA 101 (405)
T ss_pred CeEEecCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHH
Confidence 4567777666655566666666522 11 112222 3356889999999999873 3 66667777888877
Q ss_pred HHhh--hhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEecccc
Q 018240 71 LVHC--ETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHA 147 (359)
Q Consensus 71 ~~~~--~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~ 147 (359)
.++. .++||+|++++..|.+..... ..++..|++++.++.++++.++.+.++..++ ++|++|.+++..|
T Consensus 102 ~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~--------~~Tklvais~vSn 173 (405)
T COG0520 102 RGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLIT--------PKTKLVALSHVSN 173 (405)
T ss_pred HHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcC--------CCceEEEEECccc
Confidence 7774 368999999999998875311 2244568999999988999999999999888 8999999977666
Q ss_pred CCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHH
Q 018240 148 NCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKK 226 (359)
Q Consensus 148 ~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~ 226 (359)
.||.+.| +++|.++|+++|+++++|.+|+.+.. ......+ ++|++.+|.|||+++|.| |++++++++.+.
T Consensus 174 -~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~~h~---~idv~~l--~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~ 244 (405)
T COG0520 174 -VTGTVNP---VKEIAELAHEHGALVLVDAAQAAGHL---PIDVQEL--GCDFLAFSGHKWLLGPTGIGVLYVRKELLEE 244 (405)
T ss_pred -cccccch---HHHHHHHHHHcCCEEEEECccccCcc---CCCchhc--CCCEEEEcccccccCCCceEEEEEchHHHhh
Confidence 8999988 89999999999999999999866544 3344444 899999999999988988 999999999988
Q ss_pred HHHHHH----------------------hhCCCcchhHHHH-HHHHHHH-HHhHHHHhhhHHHHHHHHHHHHhcCCCceE
Q 018240 227 ARRLRK----------------------TLGGGMRQVGVLC-AAALVAL-QENVLVMLDGDHKKAKLLAEGLNQLKGLRV 282 (359)
Q Consensus 227 ~~~~~~----------------------~~~~~~~~~~~~~-~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 282 (359)
+..... .-.++......+. .+++..+ +...+.+.++.+++.+++.+.|+++|++++
T Consensus 245 l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i 324 (405)
T COG0520 245 LEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEI 324 (405)
T ss_pred cCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 622111 0111111111121 1222222 233344566677889999999999999998
Q ss_pred ecCCc--cceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcE------------EEEEeCCCCCHHHHHHHHHHHHH
Q 018240 283 DVDAV--ETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTR------------VRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 283 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~------------lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
..++. .+.++.|.+.. ....++...|.++||.++.+..+. +|+|++.++|++|||++++.|++
T Consensus 325 ~g~~~~~r~~~vsF~v~~---~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~ 401 (405)
T COG0520 325 YGPPDADRGGIVSFNVKG---IHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKK 401 (405)
T ss_pred ecCCcccCceEEEEEeCC---CCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHH
Confidence 76653 68888899887 488999999999998886664432 99999999999999999999998
Q ss_pred HHH
Q 018240 349 IYA 351 (359)
Q Consensus 349 ~~~ 351 (359)
+.+
T Consensus 402 ~~~ 404 (405)
T COG0520 402 ALA 404 (405)
T ss_pred Hhh
Confidence 764
No 41
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=5.9e-33 Score=243.86 Aligned_cols=320 Identities=16% Similarity=0.161 Sum_probs=233.5
Q ss_pred ccccccCCCCC-ChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC-eEEcCCch-HHHHHHHHHhhhhcCCe
Q 018240 4 RTVDLRSDTVT-KPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA-GLFVPSGT-MGNLISVLVHCETRGSE 80 (359)
Q Consensus 4 ~~id~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~gt-~a~~~~l~~~~~~~g~~ 80 (359)
..|+|..+.+. +|++.+++++.+.......| +..+..++++.++++++.+. .+++++|+ +++..++.+++ ++||.
T Consensus 30 ~~i~l~~nen~~~~~~~v~~a~~~~~~~~~~Y-p~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l~-~~gd~ 107 (366)
T PRK01533 30 SFVKLASNENPFGCSPRVLDELQKSWLDHALY-PDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVL-KAGDN 107 (366)
T ss_pred ceEEeCCCCCCCCCCHHHHHHHHHHHHhcCcC-CCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhc-CCCCE
Confidence 45888887655 45688998887754333344 45677899999999998865 35555555 55566666666 69999
Q ss_pred EEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHH
Q 018240 81 VILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTD 160 (359)
Q Consensus 81 vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~ 160 (359)
|+++.|+|..... .+...|.+++.++.+ ++.+|++++++.++ ++++++++++ +|||||.+++.++++
T Consensus 108 vlv~~P~y~~~~~---~~~~~g~~v~~v~~~-~~~~d~~~l~~~~~--------~~~~~v~i~~-P~NPTG~~~~~~~l~ 174 (366)
T PRK01533 108 IVTAGATFPQYRH---HAIIEGCEVKEVALN-NGVYDLDEISSVVD--------NDTKIVWICN-PNNPTGTYVNDRKLT 174 (366)
T ss_pred EEEcCCcHHHHHH---HHHHcCCEEEEeecC-CCCcCHHHHHHHhC--------cCCcEEEEeC-CCCCCCCCcCHHHHH
Confidence 9999999765443 477889999999875 55689999999887 6788999865 567999999999999
Q ss_pred HHHHHHHHcCcEEEEecccccchhhhcCchhHhhhc-CccEEEE-eccccCCCcee--eEEecCHHHHHHHHHHHHhhCC
Q 018240 161 SVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQ-AADSASV-CLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGG 236 (359)
Q Consensus 161 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~d~~~~-s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~ 236 (359)
+|+++|++++ ++|+||+|..........+...... ...++++ |+||.||+|+. ||+++++++++.++.....
T Consensus 175 ~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~~~~~--- 250 (366)
T PRK01533 175 QFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIEKLNVVRLP--- 250 (366)
T ss_pred HHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHHHHHHhcCC---
Confidence 9999998876 5777999742211101112222221 2235544 99999997554 8999999999988765422
Q ss_pred CcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhc
Q 018240 237 GMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEH 314 (359)
Q Consensus 237 ~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 314 (359)
+..+.+.+.++..+++ .+.++.++...++++++.+.++.+ |+++. ++.++|+|+.++. ..++.+.|.++
T Consensus 251 -~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~--~~~~nf~~~~~~~-----~~~~~~~l~~~ 321 (366)
T PRK01533 251 -FNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN-EIPFY--QSQTNFIFLPVEN-----GGEIYEACAHA 321 (366)
T ss_pred -CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccC--CCcCcEEEEeCCC-----HHHHHHHHHHC
Confidence 2335556666666663 344445566677788888888888 87764 3489999998853 45789999999
Q ss_pred CceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 315 GVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 315 gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
||.+.+. ..++||++ -+.++.+.++++|+++++..+.
T Consensus 322 GI~Vr~~-~~~iRis~---~~~~~~~~l~~al~~~~~~~~~ 358 (366)
T PRK01533 322 GFIIRPF-PNGVRITV---GTREQNEGVISVLQQHFENKKR 358 (366)
T ss_pred CcEEccC-CCceEEeC---CCHHHHHHHHHHHHHHHHhccc
Confidence 9999886 57899998 5789999999999998876543
No 42
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=3.3e-32 Score=243.28 Aligned_cols=331 Identities=15% Similarity=0.149 Sum_probs=237.0
Q ss_pred ccccccCCCCC-----ChHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhCC--------CCeEEcCCchHHHHH
Q 018240 4 RTVDLRSDTVT-----KPTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMGK--------EAGLFVPSGTMGNLI 68 (359)
Q Consensus 4 ~~id~~~~~~~-----~~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~~--------~~~~~~~~gt~a~~~ 68 (359)
.+|+|..+.+. .|++.+.+++.+.... ...|+...+..++++.++++++. +..++++|+++++..
T Consensus 32 ~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~ 111 (409)
T PLN02656 32 RVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDV 111 (409)
T ss_pred eeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHH
Confidence 56888888775 4457888887765443 23577778889999999999853 123566667778777
Q ss_pred HHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018240 69 SVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 69 ~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
++.+++ ++||+|++++|+|.. +. ......|++++.++.. +++.+|++.+++.++ ++++++++.++
T Consensus 112 ~~~~l~-~~gd~Vlv~~p~y~~-~~--~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~--------~~~~~v~l~~P- 178 (409)
T PLN02656 112 ALSMLA-RPGANILLPRPGFPI-YE--LCAAFRHLEVRYVDLLPEKGWEVDLDAVEALAD--------QNTVALVIINP- 178 (409)
T ss_pred HHHHHh-CCCCeEEEeCCCCCc-HH--HHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhc--------cCceEEEEECC-
Confidence 887777 599999999999764 43 2366778899888764 346789999999887 67888888665
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc---hhHhhhcCccEEEE-eccccCCCcee--eEEec-
Q 018240 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV---PVRRLVQAADSASV-CLSKGLGAPVG--SVIVG- 219 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~---~~~~~~~~~d~~~~-s~~K~~g~~~g--g~~~~- 219 (359)
+||||.+++.+++++|+++|+++|++||+|++|....+ .+. +...+.....++++ |+||.|+.|+. ||+++
T Consensus 179 ~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~ 256 (409)
T PLN02656 179 GNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAF--GSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTT 256 (409)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhccc--CCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEe
Confidence 67999999999999999999999999999999643222 221 22222222235555 99999887655 88887
Q ss_pred -------CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCcc
Q 018240 220 -------SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVE 288 (359)
Q Consensus 220 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 288 (359)
++++++.+........ +. +.+.+.++...++ .+.++.++++.++++.+.+.|++++++.....+.+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~-~~--s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~g 333 (409)
T PLN02656 257 DPSGSFRDPKIVERIKKYFDILG-GP--ATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEG 333 (409)
T ss_pred CcccccccHHHHHHHHHHHhhhc-CC--CHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCe
Confidence 3578887765544322 12 3344445544453 34555667788889999999998755543234568
Q ss_pred ceEEEEEeccc--hH-HHHHHH-HHHHHhcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 289 TNIVYFEITED--SK-LYAACL-LKKLEEHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 289 ~~~~~~~~~~~--~~-~~~~~~-~~~l~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+.++|++++.. .. .+..++ .+.|.++||.+.|+. .+++||+++ .+++++++.+++|++++.+..
T Consensus 334 g~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~--~~~e~l~eal~rl~~~~~~~~ 405 (409)
T PLN02656 334 SMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFA--ADPSSLEEALGRIKSFYLRHS 405 (409)
T ss_pred EEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHHhc
Confidence 89999998631 00 123344 456689999998874 458999996 589999999999999887654
No 43
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.9e-32 Score=242.07 Aligned_cols=333 Identities=19% Similarity=0.199 Sum_probs=242.0
Q ss_pred cccccccCCCCCChH-HHHHHHHHcCCC-CCCccCCChHHHHHHHHHHHHhC----C--C--CeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSDTVTKPT-EAMRAAMASAEV-DDDVLMHDPTAFRLETEMAKVMG----K--E--AGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~~~~~~-~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~~~----~--~--~~~~~~~gt~a~~~~l~~ 72 (359)
.+.+||..+.+..+. +.+.+++.+... ....|+...+...+++.++++++ . + ..++++|+++++..++..
T Consensus 31 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~ 110 (393)
T PRK05764 31 RDVISLGAGEPDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMA 110 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHH
Confidence 456899998877664 788888776443 23347777788999999999883 2 1 135566667788888887
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018240 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
++ ++|+.|++++|+|..... .++..|.+++.++.+. ++.+|++.+++.++ +++++|+++++ +|||
T Consensus 111 ~~-~~gd~vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~p-~NPt 177 (393)
T PRK05764 111 LL-DPGDEVIIPAPYWVSYPE---MVKLAGGVPVFVPTGEENGFKLTVEQLEAAIT--------PKTKALILNSP-SNPT 177 (393)
T ss_pred hc-CCCCEEEecCCCCcchHH---HHHHcCCEEEEEecCcccCCcCCHHHHHHhhC--------ccceEEEEECC-CCCC
Confidence 77 599999999999876443 3677899999987753 46789999999997 67889888655 6699
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhc---CccEEEEeccccCCCcee--eEEecCHHHH
Q 018240 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQ---AADSASVCLSKGLGAPVG--SVIVGSKEFI 224 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~---~~d~~~~s~~K~~g~~~g--g~~~~~~~~~ 224 (359)
|.+++.+++++|+++|++||+++|+|++|....+.. ...+...+.. ..+++..|+||.+|.++. ||++++++++
T Consensus 178 G~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~ 257 (393)
T PRK05764 178 GAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKELI 257 (393)
T ss_pred CcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCHHHH
Confidence 999999999999999999999999999975432211 1112333311 233555599999986542 8899999999
Q ss_pred HHHHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccch-
Q 018240 225 KKARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDS- 300 (359)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~- 300 (359)
+.+.........+. +...+.++...++ ...++.++.+.++++.+.+.|++++++.+.. +..+.++|+.++...
T Consensus 258 ~~~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~g~~~~~~~~~~~~~ 334 (393)
T PRK05764 258 KAMSKLQSHSTSNP--TSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLECPK-PEGAFYVFPNVSKLLG 334 (393)
T ss_pred HHHHHHHhhcccCC--ChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccC-CCcceEEEEecccccc
Confidence 99877665544444 3344444444443 4444466667788899999999988888743 456678888886521
Q ss_pred --HHHHHHHHHHH-HhcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 301 --KLYAACLLKKL-EEHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 301 --~~~~~~~~~~l-~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+.+..++.+.| .++||.+.++. .+++|+++. .+++++++++++|.+++++.
T Consensus 335 ~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~--~~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 335 KSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYA--TSLEDLEEGLERIERFLESL 392 (393)
T ss_pred cccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEec--CCHHHHHHHHHHHHHHHHhh
Confidence 01247888877 67899997764 368999985 68999999999999888753
No 44
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5e-32 Score=242.01 Aligned_cols=334 Identities=18% Similarity=0.194 Sum_probs=231.8
Q ss_pred ccccccCCCCCChH-HHHHHHHHcCCC--CCCccCCChHHHHHHHHHHHHh----CCC---C-eEEcCCc-hHHHHHHHH
Q 018240 4 RTVDLRSDTVTKPT-EAMRAAMASAEV--DDDVLMHDPTAFRLETEMAKVM----GKE---A-GLFVPSG-TMGNLISVL 71 (359)
Q Consensus 4 ~~id~~~~~~~~~~-~~~~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~----~~~---~-~~~~~~g-t~a~~~~l~ 71 (359)
..++|..+.+..+. +.+.+++.+... ....|+...+...+|+.+++++ |.+ . .+++++| .+++..++.
T Consensus 34 ~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~ 113 (403)
T PRK08636 34 DIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQ 113 (403)
T ss_pred CEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHH
Confidence 56889887766443 445555544322 2345777778899999999987 432 2 3555555 556666666
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHH----HHHhcCCCCCccCCceeEEEEecc
Q 018240 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLI----EAAIRDPKGEIVYPTTRLICLENT 145 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l----~~~l~~~~~~~~~~~~~~v~i~~~ 145 (359)
+++ .+||.|++++|+|.... ..+...|.+++.++.+ +++.+|++.+ ++.+++. .+++++++++ .
T Consensus 114 ~l~-~~gd~Vlv~~P~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~-----~~~~~~i~~~-~ 183 (403)
T PRK08636 114 AIT-NPGDVAIVPDPAYPIHS---QAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRES-----SPKPKYVVVN-F 183 (403)
T ss_pred HhC-CCCCEEEEcCCCCcchH---HHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhc-----cCCceEEEEe-C
Confidence 666 69999999999976644 3477889999988763 4467888755 4444421 1467888884 4
Q ss_pred ccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhcCcc-EE-EEeccccCCCcee--eEEecC
Q 018240 146 HANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQAAD-SA-SVCLSKGLGAPVG--SVIVGS 220 (359)
Q Consensus 146 ~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~~~d-~~-~~s~~K~~g~~~g--g~~~~~ 220 (359)
++||||.+++.+++++|.++|++|+++||+||+|....+.. ...+...+....+ ++ +.|+||.||.|+. ||++++
T Consensus 184 P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~ 263 (403)
T PRK08636 184 PHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGN 263 (403)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCC
Confidence 56799999999999999999999999999999965432211 1122233322223 33 4599999986544 999999
Q ss_pred HHHHHHHHHHHHhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEec
Q 018240 221 KEFIKKARRLRKTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEIT 297 (359)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~ 297 (359)
+++++.+.........+.+... +.++...+ +.++++.++.+.++++.+.+.|++. ++.+. .+..++++|+.++
T Consensus 264 ~~li~~~~~~~~~~~~~~~~~~--q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~p~~g~~~~~~l~ 339 (403)
T PRK08636 264 KKLVGALKKIKSWLDYGMFTPI--QVAATIALDGDQSCVEEIRETYRKRRDVLIESFANA-GWELQ-KPRASMFVWAKIP 339 (403)
T ss_pred HHHHHHHHHHHHHhcccCChHH--HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCcceEEEEECC
Confidence 9999998876654433332222 22222233 3445556667788889999999987 77653 4568999999997
Q ss_pred cch-HHHHHHHHHHH-HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 298 EDS-KLYAACLLKKL-EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 298 ~~~-~~~~~~~~~~l-~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
... ..+..++.+.+ +++||.+.|+. .+++||++. .+++++++.+++|+++++.+
T Consensus 340 ~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~~ 401 (403)
T PRK08636 340 EPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI--ENENRIRQAARNIKKFLKEL 401 (403)
T ss_pred CccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHhh
Confidence 521 12457788775 68999997762 468999995 68999999999999988764
No 45
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=1.1e-32 Score=246.96 Aligned_cols=327 Identities=19% Similarity=0.241 Sum_probs=238.4
Q ss_pred cccccCCCCC--ChHHHHHHHHHcCCCCC--------CccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhh
Q 018240 5 TVDLRSDTVT--KPTEAMRAAMASAEVDD--------DVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHC 74 (359)
Q Consensus 5 ~id~~~~~~~--~~~~~~~~a~~~~~~~~--------~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~ 74 (359)
.++|.++++. .++|.+++++.+..... ..|+..+...++++.+++++|.+..++++||++|+..++..+.
T Consensus 48 ~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i~~l~ 127 (410)
T PRK13392 48 VTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKESALLFTSGYVSNDAALSTLG 127 (410)
T ss_pred EEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHHh
Confidence 5788887665 34588888887644321 2244555688999999999999888999999999998888665
Q ss_pred h-hcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee
Q 018240 75 E-TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC 153 (359)
Q Consensus 75 ~-~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~ 153 (359)
. .+|+.|+++...|.+.+. + +...|.++..++.+ |.+.+++.++.... +++++|++++++| |||.+
T Consensus 128 ~~~~g~~vi~~~~~h~s~~~-~--~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~----~~t~~v~i~~~~n-~tG~~ 194 (410)
T PRK13392 128 KLLPGCVILSDALNHASMIE-G--IRRSGAEKQVFRHN-----DLADLEEQLASVDP----DRPKLIAFESVYS-MDGDI 194 (410)
T ss_pred cCCCCCEEEEehhhhHHHHH-H--HHHcCCeEEEEeCC-----CHHHHHHHHHhccC----CCCEEEEEeCCCC-CCccc
Confidence 2 378888888888888765 3 56678777666543 66667776653210 4688999966655 99999
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH---hhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHH
Q 018240 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR---RLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRL 230 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~---~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~ 230 (359)
.+ +++|.++|+++|+++|+||+|++|.+...+.... .+....|+++.|+||.||+ .|||+++++++++.++..
T Consensus 195 ~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~-~GG~~~~~~~~~~~l~~~ 270 (410)
T PRK13392 195 AP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGC-LGGYIAASADLIDFVRSF 270 (410)
T ss_pred cc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhc-ccchhhcCHHHHHHHHHh
Confidence 88 8999999999999999999998666543332222 1223467778899999997 457888899999987766
Q ss_pred HHhhCCCcchhHHHHHHHHHHHHHhH--HHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHH
Q 018240 231 RKTLGGGMRQVGVLCAAALVALQENV--LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLL 308 (359)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (359)
...+..+...++..++++..+++... ....+++.++++++++.|++. |+++. +..++++.+.++. ..+..++.
T Consensus 271 ~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~i~~~~--~~~~~~~~ 345 (410)
T PRK13392 271 APGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN-GIPVM--PSPSHIVPVMVGD--PTLCKAIS 345 (410)
T ss_pred CcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC--CCCCCEEEEEeCC--HHHHHHHH
Confidence 55433334344455666666664322 224566778899999999998 88764 3466776666553 13567899
Q ss_pred HHH-HhcCceeccC-------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 309 KKL-EEHGVLVMPE-------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 309 ~~l-~~~gi~~~~~-------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
++| .++||.+.+. +..++|++++..++++|+++++++|+++++++
T Consensus 346 ~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 346 DRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred HHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 988 5789998542 34689999999999999999999999988764
No 46
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-32 Score=243.17 Aligned_cols=324 Identities=19% Similarity=0.209 Sum_probs=230.8
Q ss_pred ccccccCCCCCC-hHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhC----C--C--CeEEcCCc-hHHHHHHHH
Q 018240 4 RTVDLRSDTVTK-PTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMG----K--E--AGLFVPSG-TMGNLISVL 71 (359)
Q Consensus 4 ~~id~~~~~~~~-~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~----~--~--~~~~~~~g-t~a~~~~l~ 71 (359)
+.+||+.+.+.. |.+.+.+++.+.... ...|....+..+++++++++++ . + ..+++++| ++++..++.
T Consensus 32 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~ 111 (385)
T PRK09276 32 DVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPL 111 (385)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHH
Confidence 468899887654 347788887764322 2346666678899999999884 3 1 23555555 566666666
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC
Q 018240 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC 149 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p 149 (359)
.++ ++||.|++++|+|... . ..++..|.+++.++.+. ++.+|++++++.+. .++++|+++++ +||
T Consensus 112 ~~~-~~gd~Vl~~~P~y~~~-~--~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~--------~~~~~v~l~~p-~NP 178 (385)
T PRK09276 112 AFV-NPGDVVLVPDPGYPVY-K--IGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA--------KKAKLMFINYP-NNP 178 (385)
T ss_pred HhC-CCCCEEEEcCCCCcCh-H--HHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc--------ccceEEEEeCC-CCC
Confidence 666 6999999999997654 3 33778899999887653 35679999988887 67899999654 679
Q ss_pred CceecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhcCcc--EEEEeccccCCCcee--eEEecCHHHH
Q 018240 150 GGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQAAD--SASVCLSKGLGAPVG--SVIVGSKEFI 224 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~~~d--~~~~s~~K~~g~~~g--g~~~~~~~~~ 224 (359)
||.+++.+++++|+++|++||++||+||+|....+.. ...+...+....+ ++..|+||.||.++. ||++++++++
T Consensus 179 tG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~l~ 258 (385)
T PRK09276 179 TGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADLI 258 (385)
T ss_pred CCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCHHHH
Confidence 9999999999999999999999999999975432211 1112222221112 444599999986543 8999999999
Q ss_pred HHHHHHHHhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchH
Q 018240 225 KKARRLRKTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSK 301 (359)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 301 (359)
+.+.........+. +...+.++...+ +.+.++.++++.++++++.+.|++. ++++. ++..+.++|+.++..
T Consensus 259 ~~~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~v~~~~~-- 332 (385)
T PRK09276 259 AGLGKVKSNVDSGV--FQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL-GLEVE-PPKATFYVWAPVPKG-- 332 (385)
T ss_pred HHHHHHHhhccCCC--CHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCcceEEEEECCCC--
Confidence 99887665544433 223334444444 3445556667788899999999998 87764 344677789998752
Q ss_pred HHHHHHHHHH-HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018240 302 LYAACLLKKL-EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 302 ~~~~~~~~~l-~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
.+..++.++| .++||.+.++. .+++||+++ .+++++.+++++|.+
T Consensus 333 ~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 333 YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT--VPDERIEEAVERIKK 384 (385)
T ss_pred CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC--CCHHHHHHHHHHHhh
Confidence 4677888888 57899997762 468999995 577888888877753
No 47
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=6.2e-32 Score=240.13 Aligned_cols=331 Identities=17% Similarity=0.144 Sum_probs=235.7
Q ss_pred cccccccCCCCCCh-HHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHhC----C---C--CeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSDTVTKP-TEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVMG----K---E--AGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~~~~~~-~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~----~---~--~~~~~~~gt~a~~~~l~ 71 (359)
++.|||..+.+..| ++.+.+++.+.... ...|+..++..++|++++++++ . + ..++++|+++|+..++.
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~ 107 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFR 107 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 45689999877644 36777887775443 3457667788999999999884 2 1 23555566778888887
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC-CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018240 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ-DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
.++ ++||.|++++|+|... . ......|++++.++.+. ++.+|.+++++.++ ++++++++. .++|||
T Consensus 108 ~l~-~~gd~Vl~~~p~y~~~-~--~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~--------~~~~~i~i~-~p~NPt 174 (387)
T PRK07683 108 TIL-EPGTEVILPAPIYPGY-E--PIIRLCGAKPVFIDTRSTGFRLTAEALENAIT--------EKTRCVVLP-YPSNPT 174 (387)
T ss_pred HhC-CCCCEEEEcCCCccch-H--HHHHHcCCEEEEeecCcccCCCCHHHHHHhcC--------cCceEEEEe-CCCCCC
Confidence 777 5999999999997654 3 33677899999987653 46678899999887 678888884 556799
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcC-ccEE-EEeccccCCCcee--eEEecCHHHHHH
Q 018240 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQA-ADSA-SVCLSKGLGAPVG--SVIVGSKEFIKK 226 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~d~~-~~s~~K~~g~~~g--g~~~~~~~~~~~ 226 (359)
|.+++.+++++|+++|+++|++||+|++|..........+...+... ..++ ..|+||.+|.|+- ||+++++++++.
T Consensus 175 G~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~ 254 (387)
T PRK07683 175 GVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKH 254 (387)
T ss_pred CcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHH
Confidence 99999999999999999999999999997543322112223332111 1244 4599999996543 999999999998
Q ss_pred HHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHH
Q 018240 227 ARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLY 303 (359)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 303 (359)
+.........+. +...+.++...+. ...++.++++.++++.+.+.|++. ++.+. ++..+.++|..++. ...+
T Consensus 255 ~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~~~~~~~~~~~~-~~~~ 329 (387)
T PRK07683 255 ILKVHQYNVTCA--SSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-GLDVE-KPTGAFYLFPSIGH-FTMS 329 (387)
T ss_pred HHHHHHhccCCC--ChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCeeEEEEEeccc-CCCC
Confidence 876644333222 2233444444443 334445666778889999999887 77764 34567778877764 1235
Q ss_pred HHHHHHHH-HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 304 AACLLKKL-EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 304 ~~~~~~~l-~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
..++...| +++||.+.|+. .+++||++. .+++++++.+++|.+++++-
T Consensus 330 ~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~--~~~~~~~~al~~l~~~l~~~ 384 (387)
T PRK07683 330 SFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYA--YSIETLKEGLDRLEAFLQQK 384 (387)
T ss_pred HHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHhh
Confidence 56677664 88999997753 468999996 47899999999999887643
No 48
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1.6e-32 Score=244.00 Aligned_cols=328 Identities=17% Similarity=0.098 Sum_probs=234.1
Q ss_pred ccccccCCCCCCh-HHHHHHHHHcCCC-CCCccCCChHHHHHHHHHHHH----hCCC-----CeEEcCCchHHHHHHHHH
Q 018240 4 RTVDLRSDTVTKP-TEAMRAAMASAEV-DDDVLMHDPTAFRLETEMAKV----MGKE-----AGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 4 ~~id~~~~~~~~~-~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~----~~~~-----~~~~~~~gt~a~~~~l~~ 72 (359)
..|+|..+.+..+ .+.+.+++.+... ....|....+..++++.++++ ++.+ ..++++|+++++..++..
T Consensus 31 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~ 110 (386)
T PRK09082 31 GAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILA 110 (386)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHH
Confidence 4588988766644 4677777766432 234466666777777777765 4653 235556667888888888
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018240 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
++ .+||+|++++|+|..... .++..|.+++.++.+ +++.+|++++++.++ +++++|++++ ++||||
T Consensus 111 ~~-~~gd~Vli~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~--------~~~~~v~l~~-p~NPtG 177 (386)
T PRK09082 111 LV-RPGDEVIVFDPSYDSYAP---AIELAGGRAVRVALQPPDFRVDWQRFAAAIS--------PRTRLIILNT-PHNPSG 177 (386)
T ss_pred Hc-CCCCEEEEeCCCchhhHH---HHHHcCCEEEEEecCcccccCCHHHHHHhcC--------ccceEEEEeC-CCCCCC
Confidence 87 599999999999877543 366778899999775 457889999999988 6788998865 467999
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhc--CccEEEEeccccCCCcee--eEEecCHHHHHH
Q 018240 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQ--AADSASVCLSKGLGAPVG--SVIVGSKEFIKK 226 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~--~~d~~~~s~~K~~g~~~g--g~~~~~~~~~~~ 226 (359)
.+++.+++++|.++|++||+++|+|++|....+.. .+.+...+.. ...+++.|+||.+|.|+. ||+++++++++.
T Consensus 178 ~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~ 257 (386)
T PRK09082 178 TVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSAE 257 (386)
T ss_pred cCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHHH
Confidence 99999999999999999999999999975433321 1223333321 122444599999986553 899999999999
Q ss_pred HHHHHHhhCCCcchhHHHHHHHHHH-HHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHH
Q 018240 227 ARRLRKTLGGGMRQVGVLCAAALVA-LQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAA 305 (359)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (359)
++........+.+...+.+++.... .+.+.++.++.+.++++.+.+.|++. ++++. ++..+.++|+.++...+.+..
T Consensus 258 ~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~~~g~~~~~~~~~~~~~~~~~ 335 (386)
T PRK09082 258 FRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS-RFKLL-PCEGTYFQLVDYSAISDLDDV 335 (386)
T ss_pred HHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCeeEEEEEeccccCCCCHH
Confidence 8877655444443333332222221 23445545667788999999999986 88764 345677899998631124678
Q ss_pred HHHHHH-HhcCceeccCC--------CcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018240 306 CLLKKL-EEHGVLVMPES--------STRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 306 ~~~~~l-~~~gi~~~~~~--------~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
++.+.| +++||.+.|++ .+++|++++ .+++++++.+++|++
T Consensus 336 ~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~--~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 336 EFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFA--KQEETLDAAAERLCQ 385 (386)
T ss_pred HHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 898987 78999986653 357999996 478899999988875
No 49
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=5.2e-32 Score=241.81 Aligned_cols=338 Identities=13% Similarity=0.119 Sum_probs=230.2
Q ss_pred cccccccCCCCC-----ChHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhCCC-------CeE-EcCCchHHHH
Q 018240 3 TRTVDLRSDTVT-----KPTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMGKE-------AGL-FVPSGTMGNL 67 (359)
Q Consensus 3 ~~~id~~~~~~~-----~~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~~~-------~~~-~~~~gt~a~~ 67 (359)
+..|+|.-+.+. .+++.+.+++.+.... ...|++..+..+++++++++++.. ..+ +++++++++.
T Consensus 32 ~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~ 111 (409)
T PLN00143 32 RLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAE 111 (409)
T ss_pred CceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHH
Confidence 456888887774 4457887887765433 244777788899999999998432 124 4555556777
Q ss_pred HHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEecc
Q 018240 68 ISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENT 145 (359)
Q Consensus 68 ~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~ 145 (359)
.++..++ .+||.|++++|+|... . ..+...|.+++.++.. +++.+|+++|++.++ .+++.+++.+|
T Consensus 112 ~~~~~l~-~~gd~v~v~~P~y~~~-~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--------~~~~~~~~~nP 179 (409)
T PLN00143 112 IIIKVLA-RPEANILLPRPGFPDV-E--TYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIAD--------ENTIAMVIINP 179 (409)
T ss_pred HHHHHHc-CCCCEEEEcCCCCcCH-H--HHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcc--------cCCEEEEEECC
Confidence 7777777 5999999999997654 3 3477888888888753 456789999999887 57788888665
Q ss_pred ccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhcCccEEEE-eccccCCCcee--eEEec-C
Q 018240 146 HANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQAADSASV-CLSKGLGAPVG--SVIVG-S 220 (359)
Q Consensus 146 ~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~~~d~~~~-s~~K~~g~~~g--g~~~~-~ 220 (359)
|||||.+++.+++++|+++|++|+++||+||+|....+... ..+...+.....++++ |+||.|+.|+. ||+++ +
T Consensus 180 -~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~ 258 (409)
T PLN00143 180 -GNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCD 258 (409)
T ss_pred -CCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeC
Confidence 67999999999999999999999999999999643322111 1122223222235554 99999887654 88887 3
Q ss_pred H-HHHHH---HHHHHHhhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEE
Q 018240 221 K-EFIKK---ARRLRKTLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIV 292 (359)
Q Consensus 221 ~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~ 292 (359)
+ .+.+. +..+..........+.+.+.++...++ .+.++.+++..++++.+.+.|+++++......+.+++++
T Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~ 338 (409)
T PLN00143 259 PSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFA 338 (409)
T ss_pred chhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEE
Confidence 3 33322 122222211111113344444444453 345556677778888888999887444332345689999
Q ss_pred EEEeccc--hHH-HHHHHHHHH-HhcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 293 YFEITED--SKL-YAACLLKKL-EEHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 293 ~~~~~~~--~~~-~~~~~~~~l-~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
|++++.. .+. +..++...+ .++||.+.|+. .+++||+++ .+++++++.+++|.+++++..+
T Consensus 339 w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~--~~~~~l~~al~rl~~~l~~~~~ 407 (409)
T PLN00143 339 LVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFA--VEQSSLEDGLGRLKSFCGRHAK 407 (409)
T ss_pred EEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEc--CCHHHHHHHHHHHHHHHHHhcc
Confidence 9998631 011 345565555 89999998864 468999995 6789999999999999887654
No 50
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=5e-32 Score=241.23 Aligned_cols=328 Identities=17% Similarity=0.138 Sum_probs=234.1
Q ss_pred cccccccCCCCCC-hHHHHHHHHHcCCC-CCCccCCChHHHHHHHHHHHHh----CC--C--CeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSDTVTK-PTEAMRAAMASAEV-DDDVLMHDPTAFRLETEMAKVM----GK--E--AGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~~~~-~~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~~----~~--~--~~~~~~~gt~a~~~~l~~ 72 (359)
...++|..+.+.. +.+.+.+++.+... ....|+...+..++++.+++++ |. + ..++++|+++++..++..
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~ 109 (388)
T PRK07337 30 RDIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLA 109 (388)
T ss_pred CCEEEeCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHH
Confidence 3568898887664 34777777776443 2344666677899999999987 32 1 235666667777777777
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018240 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
++ ++||+|++++|+|..... .+...|.+++.++.+. ++.+|++++++.++ +++++|++.++ +|||
T Consensus 110 l~-~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--------~~~~~v~l~~p-~NPt 176 (388)
T PRK07337 110 LV-ERGDEVLMPDPSYPCNRH---FVAAAEGRPVLVPSGPAERFQLTAADVEAAWG--------ERTRGVLLASP-SNPT 176 (388)
T ss_pred hc-CCCCEEEEeCCCchhhHH---HHHHcCCEEEEeecCCccCCcCCHHHHHhhcC--------ccceEEEEECC-CCCC
Confidence 76 699999999999887553 3566788888887653 46889999999888 68889888554 6699
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEE-eccccCCCcee--eEEecCHHHHHHH
Q 018240 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASV-CLSKGLGAPVG--SVIVGSKEFIKKA 227 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~-s~~K~~g~~~g--g~~~~~~~~~~~~ 227 (359)
|.+++.+++++|+++|+++++++|+||+|.. +.+.+..........+++++ |+||.||.|+. ||+++++++++.+
T Consensus 177 G~~~~~~~~~~i~~~a~~~~~~ii~De~y~~--~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l 254 (388)
T PRK07337 177 GTSIAPDELRRIVEAVRARGGFTIVDEIYQG--LSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPEALVGTF 254 (388)
T ss_pred CcCcCHHHHHHHHHHHHHCCCEEEEeccccc--cccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCHHHHHHH
Confidence 9999999999999999999999999999643 22222111111113456555 99999986553 9999999999988
Q ss_pred HHHHHhhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccc---h
Q 018240 228 RRLRKTLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITED---S 300 (359)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---~ 300 (359)
.......+.+.+.. .+.++...+. ....+.++.+.++++.+.+.|++. ++.+...+.+++++|++++.. .
T Consensus 255 ~~~~~~~~~~~s~~--~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~p~~g~f~~~~~~~~~~~~ 331 (388)
T PRK07337 255 EKLAQNLFICASAL--AQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GFKVPVMPDGAFYVYADCRGVAHPA 331 (388)
T ss_pred HHHHHHhccCCChH--HHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCeeEEEEEecccccCCC
Confidence 77766555444333 3333333332 223335667778889999999987 766422356889999998641 1
Q ss_pred HHHHHHHHHHH-HhcCceeccCC-------CcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 301 KLYAACLLKKL-EEHGVLVMPES-------STRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 301 ~~~~~~~~~~l-~~~gi~~~~~~-------~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
..+..++.++| .++||.+.|+. .+++|++++ .+++++++.+++|.+++
T Consensus 332 ~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~--~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 332 AGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYA--TSMSRLEEAVARLGKLF 387 (388)
T ss_pred CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEec--CCHHHHHHHHHHHHHHh
Confidence 13567888775 78999997652 468999996 46888999998887754
No 51
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-32 Score=236.59 Aligned_cols=317 Identities=22% Similarity=0.245 Sum_probs=246.4
Q ss_pred ccccccCCC-CCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhC-CC-CeEEcCCchHHHHHHHHHhhhhcCCe
Q 018240 4 RTVDLRSDT-VTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMG-KE-AGLFVPSGTMGNLISVLVHCETRGSE 80 (359)
Q Consensus 4 ~~id~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~-~~~~~~~gt~a~~~~l~~~~~~~g~~ 80 (359)
..+||+++- +.+|+|.+.+++.+.......|.. +...++++.++++++ .+ ..++.++|+..++..+..++..+||+
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd-~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~~gd~ 101 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALDKLNRYPD-PDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDT 101 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHHhhccCCC-CcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhcCCCE
Confidence 468898874 446668888888876544445544 478899999999999 55 35787888888887777776679999
Q ss_pred EEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHH
Q 018240 81 VILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTD 160 (359)
Q Consensus 81 vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~ 160 (359)
|+++.|+ |+.|. ..++..|++++.++..+ +..|++.+.+.++ .++++|+++| +|||||..++.++++
T Consensus 102 vl~~~Pt-f~~Y~--~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~--------~~~~lv~i~n-PNNPTG~~~~~~~l~ 168 (356)
T COG0079 102 VLIPEPT-FSMYE--IAAQLAGAEVVKVPLKE-FRLDLDAILAAIR--------DKTKLVFLCN-PNNPTGTLLPREELR 168 (356)
T ss_pred EEEcCCC-hHHHH--HHHHhcCCeEEEecccc-cccCHHHHHHhhh--------cCCCEEEEeC-CCCCCCCCCCHHHHH
Confidence 9999999 55566 45889999999998877 8899999999999 6789999955 555999999999999
Q ss_pred HHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCcc-EEEE-eccccCCCcee--eEEecCHHHHHHHHHHHHhhCC
Q 018240 161 SVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAAD-SASV-CLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGG 236 (359)
Q Consensus 161 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d-~~~~-s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~ 236 (359)
++.+.+.+ +.++|+|||| ..+. +.+...+....+ ++++ |+||.||.++. |+.++++++++.+++.+..+..
T Consensus 169 ~l~~~~~~-~~~vVvDEAY--~eF~--~~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr~p~~v 243 (356)
T COG0079 169 ALLEALPE-GGLVVIDEAY--IEFS--PESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVRPPFNV 243 (356)
T ss_pred HHHHhCCC-CcEEEEeCch--hhcC--CchhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHHHHHHHhcCCCCC
Confidence 99999888 9999999995 3333 233333332334 7766 99999997544 9999999999999888776554
Q ss_pred CcchhHHHHHHHHHHH--HHhHHHHhhhHHHHHHHHHHHHhcCCCce-EecCCccceEEEEEeccchHHHHHHHHHHHHh
Q 018240 237 GMRQVGVLCAAALVAL--QENVLVMLDGDHKKAKLLAEGLNQLKGLR-VDVDAVETNIVYFEITEDSKLYAACLLKKLEE 313 (359)
Q Consensus 237 ~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 313 (359)
+ ....+++..++ +++.++.+++..+.++++.+.|+.+ ++. +. +..++|++++++. .. +..+.++|.+
T Consensus 244 ~----~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~-~~~~v~--pS~aNFvlv~~~~--~~-~~~l~~~L~~ 313 (356)
T COG0079 244 S----SPALAAAIAALRDADYLEESVERIREERERLYAALKAL-GLFGVF--PSQANFVLVRVPD--AE-AAALAEALLK 313 (356)
T ss_pred C----HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhC-CCCeec--CCCCcEEEEECCC--cc-HHHHHHHHHH
Confidence 3 34455555544 3556667778888999999999999 454 43 5579999999986 23 6689999999
Q ss_pred cCceeccCC-----CcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 314 HGVLVMPES-----STRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 314 ~gi~~~~~~-----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
+||.++..+ .+++||++ -++++.++++++|+++++.
T Consensus 314 ~giivR~~~~~~~~~~~lRitv---gt~een~~ll~AL~~~~~~ 354 (356)
T COG0079 314 KGILVRDCSSVGLLPGYLRITV---GTPEENDRLLAALREVLKG 354 (356)
T ss_pred CCEEEEeCCCCCCCCCeEEEEe---CCHHHHHHHHHHHHHHHhc
Confidence 999996653 46899999 4677779999999988764
No 52
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=4.1e-32 Score=242.73 Aligned_cols=329 Identities=16% Similarity=0.112 Sum_probs=233.0
Q ss_pred ccccccCCCC-----CChHHHHHHHHHcCCCCC--CccCCChHHHHHHHHHHHHhCC-----C--CeEEcCCchHHHHHH
Q 018240 4 RTVDLRSDTV-----TKPTEAMRAAMASAEVDD--DVLMHDPTAFRLETEMAKVMGK-----E--AGLFVPSGTMGNLIS 69 (359)
Q Consensus 4 ~~id~~~~~~-----~~~~~~~~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~~~-----~--~~~~~~~gt~a~~~~ 69 (359)
.+++|..+.+ ..|.+.+.+++.+..... ..|+..++..+++++++++++. + ..++++|+++++..+
T Consensus 32 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~~~ 111 (401)
T TIGR01264 32 PMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMC 111 (401)
T ss_pred CeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHHHH
Confidence 5688888765 355688888887754432 3477778889999999999973 2 235666667788888
Q ss_pred HHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEecccc
Q 018240 70 VLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHA 147 (359)
Q Consensus 70 l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~ 147 (359)
+.+++ ++|++|++++|+|... . ..+...|++++.++.+ .++.+|++.+++.++ .++++|++++ ++
T Consensus 112 ~~~l~-~~gd~v~i~~P~y~~~-~--~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~--------~~~~~v~~~~-p~ 178 (401)
T TIGR01264 112 IAALA-NAGQNILVPRPGFPLY-E--TLAESMGIEVKLYNLLPDKSWEIDLKQLESLID--------EKTAALIVNN-PS 178 (401)
T ss_pred HHHhC-CCCCEEEEeCCCChhH-H--HHHHHcCCEEEEeecCCccCCCCCHHHHHHHhc--------cCceEEEEcC-CC
Confidence 87777 5999999999997654 3 3477888888888654 357899999999887 5678888855 57
Q ss_pred CCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc---hhHhhhcCccEEEE-eccccCCCcee--eEEecCH
Q 018240 148 NCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV---PVRRLVQAADSASV-CLSKGLGAPVG--SVIVGSK 221 (359)
Q Consensus 148 ~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~---~~~~~~~~~d~~~~-s~~K~~g~~~g--g~~~~~~ 221 (359)
||||.+++.+++++|+++|+++|++||+||+|.... +.+. +...+.....++++ |+||.|+.|+. ||+++++
T Consensus 179 NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~--~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~ 256 (401)
T TIGR01264 179 NPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMV--FSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHD 256 (401)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhc--cCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecC
Confidence 799999999999999999999999999999964322 2222 22333222235554 99999877644 8888753
Q ss_pred ------HHHHHHHHHHHhhCCCcchhHHHHHHHHHHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceE
Q 018240 222 ------EFIKKARRLRKTLGGGMRQVGVLCAAALVAL----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNI 291 (359)
Q Consensus 222 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~ 291 (359)
++++.++..... ..+. +.+.+.++...+ +.+.++.++++.++++.+.+.|++++++.+. .+.+++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~-~~~~--~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~-~p~~g~f 332 (401)
T TIGR01264 257 RRGILRDIRDGLVKLSQR-ILGP--CTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPV-MPSGAMY 332 (401)
T ss_pred cchhHHHHHHHHHHHhhc-cCCC--CcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCccc-CCCeeeE
Confidence 333443333221 1122 223333333333 2445556677888899999999998777653 3568999
Q ss_pred EEEEeccc---hHHHHHHHHHHH-HhcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 292 VYFEITED---SKLYAACLLKKL-EEHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 292 ~~~~~~~~---~~~~~~~~~~~l-~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+|+.++.. ...+..++.++| +++||.+.|++ .+++|++++ .+++++++.+++|.++++++
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~--~~~~~l~~~l~rl~~~~~~~ 400 (401)
T TIGR01264 333 MMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLT--VPVVMMEEACSRIQEFCERH 400 (401)
T ss_pred EEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEc--CCHHHHHHHHHHHHHHHhcc
Confidence 99997531 112456788887 68999998763 468999995 56899999999999888653
No 53
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=2.8e-32 Score=242.75 Aligned_cols=330 Identities=17% Similarity=0.136 Sum_probs=236.7
Q ss_pred ccccccCCCCCChH-HHHHHHHHcCCC-CCCccCCChHHHHHHHHHHHHhC----C---C--CeEEcCCchHHHHHHHHH
Q 018240 4 RTVDLRSDTVTKPT-EAMRAAMASAEV-DDDVLMHDPTAFRLETEMAKVMG----K---E--AGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 4 ~~id~~~~~~~~~~-~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~~~----~---~--~~~~~~~gt~a~~~~l~~ 72 (359)
..|||..+.+..+. +.+.+++.+... ....|+...+..++++.++++++ . + ..++++|+++++..++..
T Consensus 27 ~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~ 106 (387)
T PRK08912 27 GAINLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLA 106 (387)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHH
Confidence 56889887666543 566666655332 23457777778899999998863 2 1 235566667777777777
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018240 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
++ ++||.|++++|+|.... ..++..|.+++.++.+ +++.+|++.+++.+. ++++++++.+ ++||||
T Consensus 107 ~~-~~gd~Vlv~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~--------~~~~~v~l~~-p~NPtG 173 (387)
T PRK08912 107 LV-EPGDEVVLFQPLYDAYL---PLIRRAGGVPRLVRLEPPHWRLPRAALAAAFS--------PRTKAVLLNN-PLNPAG 173 (387)
T ss_pred hc-CCCCEEEEeCCCchhhH---HHHHHcCCEEEEEecCcccCcCCHHHHHHHhC--------ccceEEEEeC-CCCCcC
Confidence 77 59999999999976644 3477889999888775 357889999999987 6788998864 567999
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhc--CccEEEEeccccCCCcee--eEEecCHHHHHH
Q 018240 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQ--AADSASVCLSKGLGAPVG--SVIVGSKEFIKK 226 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~--~~d~~~~s~~K~~g~~~g--g~~~~~~~~~~~ 226 (359)
.+++.+++++|.++|++|+++||+||+|....+.. ...+...+.. ..++++.|+||.||.++- ||+++++++++.
T Consensus 174 ~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~ 253 (387)
T PRK08912 174 KVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPLLRV 253 (387)
T ss_pred cccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHHHHHH
Confidence 99999999999999999999999999974332211 1112222211 233556699999986542 899999999998
Q ss_pred HHHHHHhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEecc-chHH
Q 018240 227 ARRLRKTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITE-DSKL 302 (359)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~ 302 (359)
+.........+. ++....++...+ ..+.++.++++.++++.+.+.|++. |+++. ++.++.++|+.++. ....
T Consensus 254 l~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~l~~~l~~~~~~~ 329 (387)
T PRK08912 254 LAKAHQFLTFTT--PPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI-GFPVL-PSQGTYFLTVDLAPLGLAE 329 (387)
T ss_pred HHHHHhhccccC--ChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCcceEEEecccccCCCC
Confidence 876665544333 222333333333 3445556777888999999999998 88764 34567788988864 1113
Q ss_pred HHHHHHHHH-HhcCceeccCC--------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 303 YAACLLKKL-EEHGVLVMPES--------STRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 303 ~~~~~~~~l-~~~gi~~~~~~--------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
+..++.+.| .++||.+.|+. .+++|++++ .+++.+++.+++|.+.+++
T Consensus 330 ~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~--~~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 330 DDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFA--KRDATLDEAVERLAAARRR 386 (387)
T ss_pred CHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEe--CCHHHHHHHHHHHHHHHhc
Confidence 677888887 67899997642 368999996 4689999999999887653
No 54
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.3e-32 Score=221.80 Aligned_cols=334 Identities=15% Similarity=0.139 Sum_probs=253.0
Q ss_pred ccccccCCCCC----C-hHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhCCC--------CeEEcCCchHHHHH
Q 018240 4 RTVDLRSDTVT----K-PTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMGKE--------AGLFVPSGTMGNLI 68 (359)
Q Consensus 4 ~~id~~~~~~~----~-~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~~~--------~~~~~~~gt~a~~~ 68 (359)
++|-+..+.++ + ..++..+|+..+... .+.|+++.+....|++++++++.+ +.+++++.++|+..
T Consensus 62 ~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~ 141 (447)
T KOG0259|consen 62 PILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIEL 141 (447)
T ss_pred eeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHH
Confidence 56677775443 2 227777777765543 557889999999999999996543 34677777899999
Q ss_pred HHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeee--cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018240 69 SVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVK--NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 69 ~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
++.++. +||..|++|+|. ++.|. .-+...|+++++++ .+.+|.+|++.++..++ ++|.++++.||+
T Consensus 142 ~i~~LA-~p~aNILlPrPG-fp~Y~--~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D--------ENT~AivviNP~ 209 (447)
T KOG0259|consen 142 AISSLA-NPGANILLPRPG-FPLYD--TRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD--------ENTVAIVVINPN 209 (447)
T ss_pred HHHHhc-CCCCceecCCCC-CchHH--HhhhhcCceeEeecccCcccceechHHHHHhhc--------cCeeEEEEeCCC
Confidence 999999 699999999999 55676 44788899999884 35779999999999999 789999885655
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhcCccEEEE-eccccCCCcee--eEEecC--
Q 018240 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQAADSASV-CLSKGLGAPVG--SVIVGS-- 220 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~~~d~~~~-s~~K~~g~~~g--g~~~~~-- 220 (359)
||.|.+|+.+-+++|++.|+++|++||.||+|....++.. ..++..+...+.++++ |.||.+-.|++ ||++..
T Consensus 210 -NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~ 288 (447)
T KOG0259|consen 210 -NPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDP 288 (447)
T ss_pred -CCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecc
Confidence 5999999999999999999999999999999655444422 2345555556678887 99999988877 777752
Q ss_pred ------HHHHHHHHHHHHhhCCCcchhHHHHHHHHHHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccce
Q 018240 221 ------KEFIKKARRLRKTLGGGMRQVGVLCAAALVAL----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETN 290 (359)
Q Consensus 221 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~ 290 (359)
...++.+ ......+..+..+++++.-.-| +++....+.-.+.+++.-.+.|+++|++.....|.++.
T Consensus 289 ~gvf~~~~~~q~~---~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~m 365 (447)
T KOG0259|consen 289 RGVFRDTKVVQGI---KNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCM 365 (447)
T ss_pred cccccchHHHHHH---HHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcce
Confidence 2233343 3333333333445555554334 45555566678889999999999999998545567888
Q ss_pred EEEEEeccc---hHHHHHHHHHHH-HhcCceeccC----CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 291 IVYFEITED---SKLYAACLLKKL-EEHGVLVMPE----SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 291 ~~~~~~~~~---~~~~~~~~~~~l-~~~gi~~~~~----~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
++|+.++-. +..+..+|+++| +++.+.+-|| -.+++|+++ ....+.+++++++|+++..+-.+
T Consensus 366 ylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i--~~~~~~leea~~Rik~Fc~RH~~ 436 (447)
T KOG0259|consen 366 YLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVI--TVEEEMLEEAFSRIKEFCDRHSK 436 (447)
T ss_pred EEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEE--ccChHHHHHHHHHHHHHHHhhhh
Confidence 999887642 123566899999 8899998776 367899999 68999999999999999877653
No 55
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=7.4e-32 Score=240.84 Aligned_cols=334 Identities=16% Similarity=0.101 Sum_probs=232.2
Q ss_pred ccccccCCCCC----ChHHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHhCCC--------CeEEcCCchHHHHHHH
Q 018240 4 RTVDLRSDTVT----KPTEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVMGKE--------AGLFVPSGTMGNLISV 70 (359)
Q Consensus 4 ~~id~~~~~~~----~~~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~~~--------~~~~~~~gt~a~~~~l 70 (359)
.+|||..+.+. .|++.+.+++.+.... ...|+..++..++++.++++++.. ..++++|+++++..++
T Consensus 31 ~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~ 110 (398)
T PRK08363 31 KVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIF 110 (398)
T ss_pred CeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHH
Confidence 56899988873 4668888888765432 345777788999999999998432 1245555667777777
Q ss_pred HHhhhhcCCeEEecCCCcceeeccccccccCCccceee-ecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccC
Q 018240 71 LVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTV-KNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHAN 148 (359)
Q Consensus 71 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ 148 (359)
.+++ ++||.|++++|+|..... .+...|.+++.+ +.+ +++.+|++++++.++ +++++|+++++ +|
T Consensus 111 ~~~~-~~gd~Vl~~~p~y~~~~~---~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~--------~~~~~v~l~~p-~N 177 (398)
T PRK08363 111 GALL-DPGDEILIPGPSYPPYTG---LVKFYGGVPVEYRTIEEEGWQPDIDDIRKKIT--------EKTKAIAVINP-NN 177 (398)
T ss_pred HHhC-CCCCEEEEcCCCCcchHH---HHHHcCCEEEEeccccccCCcCCHHHHHhhCC--------cceEEEEEECC-CC
Confidence 7776 699999999999777553 366777777777 443 345689999999887 67899999654 66
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEE-eccccCCCcee--eEEec--CHHH
Q 018240 149 CGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASV-CLSKGLGAPVG--SVIVG--SKEF 223 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~-s~~K~~g~~~g--g~~~~--~~~~ 223 (359)
|||.+++.+++++|.++|+++|+++|+|++|....+.....+...+.....++++ |+||.|+.|+- ||++. ++++
T Consensus 178 PtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~ 257 (398)
T PRK08363 178 PTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGK 257 (398)
T ss_pred CCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHH
Confidence 9999999999999999999999999999997543221111223333322335555 99999876543 77775 6777
Q ss_pred HHHHHHHHHhh-CCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccc
Q 018240 224 IKKARRLRKTL-GGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITED 299 (359)
Q Consensus 224 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 299 (359)
++.+....... ......+...+.++...+ .++.++.++++.++++.+.+.|++++++.+. .+.++.++|+.++..
T Consensus 258 ~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~-~p~g~~~~~~~l~~~ 336 (398)
T PRK08363 258 LAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTT-KPQGAFYIFPRIEEG 336 (398)
T ss_pred HHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEec-CCCeEEEEEEEeccC
Confidence 66655433221 111222333344444444 3455556777888899999999988787763 445666777777641
Q ss_pred hHHHHHHHH-HHHHhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 300 SKLYAACLL-KKLEEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 300 ~~~~~~~~~-~~l~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
...+..++. +.|.++||.+.|+. .+++|+++. .+++++++++++|++++++.
T Consensus 337 ~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~~~~~ 395 (398)
T PRK08363 337 PWKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFL--PPVEILEEAMDRFEEFMRER 395 (398)
T ss_pred CCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 001334554 45589999997753 468999994 67899999999999988764
No 56
>PRK07179 hypothetical protein; Provisional
Probab=100.00 E-value=4.3e-32 Score=242.93 Aligned_cols=322 Identities=19% Similarity=0.253 Sum_probs=235.0
Q ss_pred ccccccCCCCCChH--HHHHHHHHcCCCC-------CCc-cCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHh
Q 018240 4 RTVDLRSDTVTKPT--EAMRAAMASAEVD-------DDV-LMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~~~~--~~~~~a~~~~~~~-------~~~-~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~ 73 (359)
..+||.+..+..-. |++++++.++... ... ....+...++++.+++++|.+.+++++||++|+..++.++
T Consensus 55 ~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~sG~~An~~~l~~l 134 (407)
T PRK07179 55 DAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFESCLLCQSGWAANVGLLQTI 134 (407)
T ss_pred cEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHh
Confidence 46889887665433 8888888765421 111 2223577999999999999998999999999999999998
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee
Q 018240 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC 153 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~ 153 (359)
. .+|+.|+++.+.|.+.+. + +...|++++.++. .|++++++.+++ .++++|++++ .+||||.+
T Consensus 135 ~-~~g~~v~~~~~~h~s~~~-~--~~~~g~~~~~~~~-----~d~~~l~~~l~~-------~~~~lV~v~~-v~n~tG~i 197 (407)
T PRK07179 135 A-DPNTPVYIDFFAHMSLWE-G--VRAAGAQAHPFRH-----NDVDHLRRQIER-------HGPGIIVVDS-VYSTTGTI 197 (407)
T ss_pred C-CCCCEEEEECCcCHHHHH-H--HHHCCCeEEEecC-----CCHHHHHHHHHh-------cCCeEEEECC-CCCCCCcc
Confidence 8 489999999999988875 3 5566777666644 399999999973 2477888855 45599999
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH-hh--hcCccEEEEeccccCCCceeeEEecCHHHHHHHHHH
Q 018240 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR-RL--VQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRL 230 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~-~~--~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~ 230 (359)
.| +++|.++|+++|+++|+||+|++|..+..+.... .+ ...+|+++.|+||++|++ +|++++++++++.+...
T Consensus 198 ~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~~-~G~l~~~~~~~~~~~~~ 273 (407)
T PRK07179 198 AP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAGR-AGIITCPRELAEYVPFV 273 (407)
T ss_pred cc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhcc-CeEEEeCHHHHHHHHHh
Confidence 98 7899999999999999999998765543333222 22 124688899999999864 67788888887776543
Q ss_pred HHh--hCCCcchhHHHHHHHHHHHHHh--HHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHH
Q 018240 231 RKT--LGGGMRQVGVLCAAALVALQEN--VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAAC 306 (359)
Q Consensus 231 ~~~--~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (359)
... ++.+. .+...++...+++.. .+..+++..++++++++.|+++ |+++. ..++++++.++. ..+...
T Consensus 274 ~~~~~~~~t~--~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~---~~~~i~~l~~~~--~~~~~~ 345 (407)
T PRK07179 274 SYPAIFSSTL--LPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL-GYNIR---SESQIIALETGS--ERNTEV 345 (407)
T ss_pred CcCeeeCCCC--CHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC---CCCCEEEEEeCC--HHHHHH
Confidence 322 23332 222223333333322 1236677889999999999998 88764 256778877654 135678
Q ss_pred HHHHHHhcCcee----ccC---CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 307 LLKKLEEHGVLV----MPE---SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 307 ~~~~l~~~gi~~----~~~---~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+.+.|.++||.+ .|. +...+||+++..++++|+++++++|++++++..
T Consensus 346 ~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~ 400 (407)
T PRK07179 346 LRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEVD 400 (407)
T ss_pred HHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhhC
Confidence 888999999974 232 357899999999999999999999999988764
No 57
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=100.00 E-value=3.6e-32 Score=241.29 Aligned_cols=324 Identities=17% Similarity=0.251 Sum_probs=231.9
Q ss_pred ChHHHHHHHHHcCCCCCC---------ccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecC
Q 018240 15 KPTEAMRAAMASAEVDDD---------VLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGD 85 (359)
Q Consensus 15 ~~~~~~~~a~~~~~~~~~---------~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~ 85 (359)
++.+++.+++.+...... .....+...++|+.+++++|.+..++++||++++..++.+++ ++|++|+++.
T Consensus 31 p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~l~-~~gd~Vlv~~ 109 (387)
T PRK09331 31 ILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHSLC-KKGDYVVLDG 109 (387)
T ss_pred CCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc-CCCCEEEECC
Confidence 344788888876442211 122356789999999999999988999999999999999987 5999999999
Q ss_pred CCcceeeccccccccCCccceeeec--CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHH
Q 018240 86 NSHIHIYENGGISTIGGVHPRTVKN--NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVG 163 (359)
Q Consensus 86 ~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~ 163 (359)
++|++.+. + ++..|++++.++. ++++.+|++++++.+++..+ ...+++++|+++++.+ +||...+ +++|.
T Consensus 110 ~~h~s~~~-~--~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~-~~~~~~~lV~l~~~~~-~tG~~~~---l~~I~ 181 (387)
T PRK09331 110 LAHYTSYV-A--AERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKE-ETGKPPALALLTHVDG-NYGNLAD---AKKVA 181 (387)
T ss_pred CchHHHHH-H--HHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhh-ccCCCCEEEEEECCCC-CCccccc---HHHHH
Confidence 99999886 3 6778999999987 56788999999999974211 0113688999977654 8998776 89999
Q ss_pred HHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHHh--------h
Q 018240 164 EIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRKT--------L 234 (359)
Q Consensus 164 ~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~--------~ 234 (359)
++|+++|+++|+|++|+.|..+. +... .++|+++.|+||++++|.| |++++++++++.+...... +
T Consensus 182 ~la~~~g~~livD~a~~~g~~~~---~~~~--~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~ 256 (387)
T PRK09331 182 KVAHEYGIPFLLNGAYTVGRMPV---DGKK--LGADFIVGSGHKSMAASAPSGVLATTEEYADKVFRTSRKFGVKEVELL 256 (387)
T ss_pred HHHHHcCCEEEEECCcccCCcCC---CHHH--cCCCEEEeeCcccccCCCCEEEEEECHHHHhhcccccCCCcccceeee
Confidence 99999999999999987765432 2222 2789999999999987665 8999999888876543321 2
Q ss_pred CCCcchhHHHHHH-HHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecC-CccceEEEEEeccc------hHHHHHH
Q 018240 235 GGGMRQVGVLCAA-ALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVD-AVETNIVYFEITED------SKLYAAC 306 (359)
Q Consensus 235 ~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~~~~~~~~~~~~~------~~~~~~~ 306 (359)
+.+..+.+..... ++..+.+..+ +.++..++++++++.|++++|+++... +...+++.+..+.- ...++.+
T Consensus 257 ~~~~~~~~~~~~~aal~~~~~~~~-~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 335 (387)
T PRK09331 257 GCTLRGAPLVTLMASFPHVVERVK-RWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFF 335 (387)
T ss_pred ceecCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhhccccchh
Confidence 2222222222111 1222233333 455667788899999999999998632 22455555554420 1123457
Q ss_pred HHHHHHhcCceeccCCCcE-EEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 307 LLKKLEEHGVLVMPESSTR-VRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 307 ~~~~l~~~gi~~~~~~~~~-lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+.+.|.++||...+.+... +|+.. .+++++++++++++|+++++++.
T Consensus 336 ~~~~L~~~gI~~~~~~~~~i~ri~~-~g~t~~di~~l~~aL~~i~~~~~ 383 (387)
T PRK09331 336 LYEELKKRGIHGIKPGATKEFKLST-YGLTWEQVEYVADAFKEIAEKYG 383 (387)
T ss_pred HHHHHHHcCceEEccCCceEEEEEe-ccCCHHHHHHHHHHHHHHHHhcC
Confidence 9999999999965555444 55544 46899999999999999988754
No 58
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=3.2e-32 Score=243.48 Aligned_cols=329 Identities=18% Similarity=0.218 Sum_probs=238.7
Q ss_pred ccccccCCCCCChH--HHHHHHHHcCCCCCC--------ccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHh
Q 018240 4 RTVDLRSDTVTKPT--EAMRAAMASAEVDDD--------VLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~~~~--~~~~~a~~~~~~~~~--------~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~ 73 (359)
+.++|.|+++.+.. |++++++.+...... .++..+...++++.+++++|.+.++++++|++|+..++..+
T Consensus 46 ~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai~~l 125 (402)
T TIGR01821 46 DVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKESALVFTSGYVANDATLATL 125 (402)
T ss_pred eEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHHHHh
Confidence 45899998887443 888888877543211 23456778999999999999888899999999999999887
Q ss_pred hh-hcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018240 74 CE-TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 74 ~~-~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
.. .+++.|+.+...|.+... + +...|+++..++.+ |.+++++.++...+ .++++|+++++.+ |+|.
T Consensus 126 ~~~~~~~~v~~~~~~h~s~~~-~--~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~----~~~~~v~~e~~~~-~~G~ 192 (402)
T TIGR01821 126 AKIIPGCVIFSDELNHASMIE-G--IRHSGAEKFIFRHN-----DVAHLEKLLQSVDP----NRPKIIAFESVYS-MDGD 192 (402)
T ss_pred hCCCCCCEEEEcchHhHHHHH-H--HHHcCCeEEEECCC-----CHHHHHHHHHhccC----CCCeEEEEcCCCC-CCCC
Confidence 63 256667677677877654 2 55667666555543 78888888863210 3578899977665 9999
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHh---hhcCccEEEEeccccCCCceeeEEecCHHHHHHHHH
Q 018240 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRR---LVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARR 229 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~---~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~ 229 (359)
+.| +++|.++|++||+++|+||+|++|.+...+..... +....|++..+++|.||+ .|||+++++++++.++.
T Consensus 193 ~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~-~GG~i~~~~~~~~~l~~ 268 (402)
T TIGR01821 193 IAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGV-VGGYIAASRKLIDAIRS 268 (402)
T ss_pred ccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhcc-CCceeecCHHHHHHHHH
Confidence 988 89999999999999999999986655433322111 222457777799999986 56788899999888765
Q ss_pred HHHhhCCCcchhHHHHHHHHHHHHHhH--HHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHH
Q 018240 230 LRKTLGGGMRQVGVLCAAALVALQENV--LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACL 307 (359)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (359)
....+..+...++..++++..+++... +...++..++.+++.+.|+++ |+++.. ..++++.+.+... ..+.++
T Consensus 269 ~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~i~~i~~~~~--~~a~~~ 343 (402)
T TIGR01821 269 YAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL-GIPVIP--NPSHIVPVIIGDA--ALCKKV 343 (402)
T ss_pred hCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc-CCCcCC--CCCCEEEEEeCCH--HHHHHH
Confidence 544333333345556666666665432 224455668889999999988 877642 3577777766541 356788
Q ss_pred HHHHH-hcCceecc-------CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 308 LKKLE-EHGVLVMP-------ESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 308 ~~~l~-~~gi~~~~-------~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
.+.|. ++||.+.+ .+..++|++++..++++|+++++++|+++++++.
T Consensus 344 ~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~ 398 (402)
T TIGR01821 344 SDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRLG 398 (402)
T ss_pred HHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 88884 67999844 2446899999999999999999999999987653
No 59
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=1.4e-31 Score=239.58 Aligned_cols=332 Identities=20% Similarity=0.259 Sum_probs=237.8
Q ss_pred cccCCCCCCh-HHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecC
Q 018240 7 DLRSDTVTKP-TEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGD 85 (359)
Q Consensus 7 d~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~ 85 (359)
||.++..+.+ .+++.+++.. +...|+.+++..+||++++++++.+++++++||++|+..++.+++ ++|| |++++
T Consensus 49 D~~tds~t~a~~~a~~~a~~~---g~~~Y~~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~~~~~~all-~pGD-Vii~~ 123 (460)
T PRK13238 49 DLLTDSGTGAMSDRQWAAMMR---GDEAYAGSRSYYRLEDAVKDIFGYPYTIPTHQGRAAEQILFPVLI-KKGD-VVPSN 123 (460)
T ss_pred CCCCCCCchhhhHHHHHHHHh---CCcccCCCCCHHHHHHHHHHHhCCCcEEECCCHHHHHHHHHHHhC-CCCC-EEccC
Confidence 4444442222 2445555543 556799999999999999999999999999999999999988887 5999 88888
Q ss_pred CCcceeeccccccccCCccceeeecCC----------CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc-eec
Q 018240 86 NSHIHIYENGGISTIGGVHPRTVKNNQ----------DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG-RCL 154 (359)
Q Consensus 86 ~~~~~~~~~~~~~~~~g~~~~~v~~~~----------~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG-~~~ 154 (359)
|. +..+. ....+.|.+++.++.+. .|.+|+++|++.++... .+++++|+++ .++|||| .++
T Consensus 124 p~-~~~~~--~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~----~~~tk~Ivl~-~p~NptGG~v~ 195 (460)
T PRK13238 124 YH-FDTTR--AHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVG----AENVPFIVMT-ITNNSAGGQPV 195 (460)
T ss_pred Cc-ccchH--HHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcC----CCceeEEEEe-cCCCCCCCcCC
Confidence 84 55565 44778899999887642 24599999999998310 0368899985 5556987 999
Q ss_pred ChhhHHHHHHHHHHcCcEEEEecccccchh--------hhcCchhHhh----hcCccEEEEeccccCCCceeeEEecC-H
Q 018240 155 SVEYTDSVGEIAKKHGLKLHIDGARIFNAA--------VALGVPVRRL----VQAADSASVCLSKGLGAPVGSVIVGS-K 221 (359)
Q Consensus 155 ~~~~l~~i~~~~~~~~~~li~D~a~~~~~~--------~~~~~~~~~~----~~~~d~~~~s~~K~~g~~~gg~~~~~-~ 221 (359)
+.+++++|.++|++||++||+|++|.++.. .+.+.+..++ ....|++++|.+|.+.+|.||+++.+ +
T Consensus 196 s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~ 275 (460)
T PRK13238 196 SMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIGGLLCFRDE 275 (460)
T ss_pred CHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcceeEEEcChH
Confidence 999999999999999999999998865322 1123344333 24689999999998888889988887 6
Q ss_pred HHHHHHHHHHHh-hCC-Ccch-hHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEec
Q 018240 222 EFIKKARRLRKT-LGG-GMRQ-VGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEIT 297 (359)
Q Consensus 222 ~~~~~~~~~~~~-~~~-~~~~-~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~ 297 (359)
++.++++..... .+. ++.. +...+.+...++++..+ ...+...+++++|.+.|++. |+.+.. |.++.++++.+.
T Consensus 276 ~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~-p~Gg~~v~~d~~ 353 (460)
T PRK13238 276 DLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA-GVPIQT-PAGGHAVFVDAG 353 (460)
T ss_pred HHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC-CCCeEc-cCCceEEEEEch
Confidence 788887655321 121 1211 22223333444443222 24445556689999999998 999864 567888888875
Q ss_pred cc------hHHHHHHHHHHH-HhcCceeccCC-----------------CcEEEEEeCC-CCCHHHHHHHHHHHHHHHHH
Q 018240 298 ED------SKLYAACLLKKL-EEHGVLVMPES-----------------STRVRIVVHH-QISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 298 ~~------~~~~~~~~~~~l-~~~gi~~~~~~-----------------~~~lRi~~~~-~~~~~~i~~~~~~l~~~~~~ 352 (359)
.- .+....+++.+| .+.||.++|++ ...+|+++.- ..+.++++.++++|.++.++
T Consensus 354 ~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 354 KFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred hcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 31 012357788888 89999997653 3679999742 34899999999999988754
Q ss_pred H
Q 018240 353 V 353 (359)
Q Consensus 353 ~ 353 (359)
-
T Consensus 434 ~ 434 (460)
T PRK13238 434 R 434 (460)
T ss_pred H
Confidence 3
No 60
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=8.5e-32 Score=240.05 Aligned_cols=323 Identities=16% Similarity=0.117 Sum_probs=229.8
Q ss_pred cccccccCCCCC-ChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHh----C----CCC--eEEcCC-chHHHHHHH
Q 018240 3 TRTVDLRSDTVT-KPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVM----G----KEA--GLFVPS-GTMGNLISV 70 (359)
Q Consensus 3 ~~~id~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~----~----~~~--~~~~~~-gt~a~~~~l 70 (359)
...|+|..+.+. .|++.+.+++.+.......|+...+..++++.+++++ + .+. .+++++ +++++..++
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~ 107 (393)
T TIGR03538 28 KPPIALSIGEPKHPTPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFA 107 (393)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHH
Confidence 357889887665 4458888888875544456777778899999999987 3 332 355555 456666666
Q ss_pred HHhhhhcCCe--EEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018240 71 LVHCETRGSE--VILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 71 ~~~~~~~g~~--vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
..++ ++|+. |+++.|+|.. +. ..+...|.+++.++.++ ++.+|++++++.+. .++++|++. .+
T Consensus 108 ~~l~-~~gd~~~vlv~~P~y~~-~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~--------~~~k~i~l~-~p 174 (393)
T TIGR03538 108 QAVI-NPGQAPLVVMPNPFYQI-YE--GAALLAGAEPYFLNCTAENGFLPDFDAVPESVW--------RRCQLLFVC-SP 174 (393)
T ss_pred HHHc-CCCCcceEEecCCCCcc-hH--HHHHhcCCeEEEeeccccCCCCCCHHHHHHHHh--------hcceEEEEe-CC
Confidence 7666 58886 9999999655 44 34778899999997753 35689999999887 578999985 56
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh--cCchhH-h---hh--cCccEEE-EeccccCCCcee--e
Q 018240 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA--LGVPVR-R---LV--QAADSAS-VCLSKGLGAPVG--S 215 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~--~~~~~~-~---~~--~~~d~~~-~s~~K~~g~~~g--g 215 (359)
+||||.+++.+++++|+++|++|+++||+||+|....... ...+.. . .. ....+++ .|+||.++.++. |
T Consensus 175 ~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG 254 (393)
T TIGR03538 175 GNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSG 254 (393)
T ss_pred CCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceE
Confidence 7799999999999999999999999999999975332210 011111 1 10 0112444 499998876544 8
Q ss_pred EEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHH--HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEE
Q 018240 216 VIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVAL--QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVY 293 (359)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~ 293 (359)
|+++++++++.+.......+.+. +...+.++...+ +.+.+..++.++++++.+.+.|++. +.+ ..+.+++++|
T Consensus 255 ~~i~~~~l~~~~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~~-~~p~gg~f~~ 329 (393)
T TIGR03538 255 FVAGDAEILKAFLRYRTYHGCAM--PIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV--LDL-ELPDAGFYLW 329 (393)
T ss_pred EEecCHHHHHHHHHHHHhhccCc--CHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh--Ccc-cCCCeeEEEE
Confidence 99999999998877665444333 333333433334 3445556667788888888888875 333 2356899999
Q ss_pred EEeccchHHHHHHHHHHH-HhcCceeccCC------------CcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 294 FEITEDSKLYAACLLKKL-EEHGVLVMPES------------STRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 294 ~~~~~~~~~~~~~~~~~l-~~~gi~~~~~~------------~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
+.++. +..++.+.| +++||.+.|+. .+++||++. .+++++++++++|.+.
T Consensus 330 ~~~~~----~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 330 PKVPG----DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALV--APLEECVEAAERIRSF 392 (393)
T ss_pred EECCC----CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEec--CCHHHHHHHHHHHHHh
Confidence 99873 456788887 67899996653 357999995 4789999999998764
No 61
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=4.9e-32 Score=241.15 Aligned_cols=328 Identities=17% Similarity=0.158 Sum_probs=233.5
Q ss_pred ccccccCCCCCCh-HHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhCCC-------CeEEcCC-chHHHHHHHHH
Q 018240 4 RTVDLRSDTVTKP-TEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMGKE-------AGLFVPS-GTMGNLISVLV 72 (359)
Q Consensus 4 ~~id~~~~~~~~~-~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~~~-------~~~~~~~-gt~a~~~~l~~ 72 (359)
..|||.++.+..+ .+.+.+++.+.... ...|+..++..++++.++++++.. ..+++++ +++++..++.+
T Consensus 30 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~ 109 (386)
T PRK07550 30 PLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVT 109 (386)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHH
Confidence 4689999876654 47788887764322 234666678899999999887521 2344454 56677777777
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018240 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
++ ++||+|++++|+|.... ..++..|++++.++.+. ++.+|++++++.++ .++++|+++++ +|||
T Consensus 110 l~-~~gd~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~--------~~~~~v~~~~P-~NPt 176 (386)
T PRK07550 110 LA-GAGDEVILPLPWYFNHK---MWLDMLGIRPVYLPCDEGPGLLPDPAAAEALIT--------PRTRAIALVTP-NNPT 176 (386)
T ss_pred hc-CCCCEEEEcCCCCcchH---HHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhc--------ccCcEEEEeCC-CCCC
Confidence 76 59999999999976644 34678899999998753 45679999999998 67888888665 5799
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh---cCccEE-EEeccccCCCcee--eEEecCHHHH
Q 018240 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV---QAADSA-SVCLSKGLGAPVG--SVIVGSKEFI 224 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~-~~s~~K~~g~~~g--g~~~~~~~~~ 224 (359)
|.+++.+++++|+++|++||++||+|++|..... ..+.....+. .+.+++ +.|+||.+|.|+. ||++++++++
T Consensus 177 G~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~ 255 (386)
T PRK07550 177 GVVYPPELLHELYDLARRHGIALILDETYRDFDS-GGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARI 255 (386)
T ss_pred CcccCHHHHHHHHHHHHHcCeEEEEeccchhhcc-CCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHHH
Confidence 9999999999999999999999999999643221 1111111111 122344 4599999985542 8999999998
Q ss_pred HHHHHHHHhhCCCcchhHHHHHHH-HHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHH
Q 018240 225 KKARRLRKTLGGGMRQVGVLCAAA-LVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLY 303 (359)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 303 (359)
+.+.......+.+.+.....++.. +..++++.++.++.+.++++.+.+.|++.+++.+. +.+++++|+.++. .+.+
T Consensus 256 ~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~g~~~~~~~~~~-~~~~ 332 (386)
T PRK07550 256 AEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWELL--ASGAYFAYVRHPF-PDRP 332 (386)
T ss_pred HHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceeC--CCceEEEEecCCC-CCCC
Confidence 888776655444443222222222 22234555545667788889999999887666542 4478889998864 1247
Q ss_pred HHHHHHHH-HhcCceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 304 AACLLKKL-EEHGVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 304 ~~~~~~~l-~~~gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
..+++++| .++||.+.|+ +..++||+++ ..+++++++++++|.++
T Consensus 333 ~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~-~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 333 SREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFA-NADVAGIGELVERLRAF 384 (386)
T ss_pred HHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEee-cCCHHHHHHHHHHHHhh
Confidence 78899987 6789999775 2468999996 46789999999999764
No 62
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=2e-31 Score=239.51 Aligned_cols=337 Identities=15% Similarity=0.077 Sum_probs=224.5
Q ss_pred ccccccCCCC----CChHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhCCC-------CeEEcCCch-HHHHHH
Q 018240 4 RTVDLRSDTV----TKPTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMGKE-------AGLFVPSGT-MGNLIS 69 (359)
Q Consensus 4 ~~id~~~~~~----~~~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~~~-------~~~~~~~gt-~a~~~~ 69 (359)
.+++|..+++ ..|++.+.+++.+.... ...|+...+..++|+.++++++.. ..+++++|+ +++..+
T Consensus 33 ~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~ 112 (433)
T PRK06855 33 KITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKI 112 (433)
T ss_pred cccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHH
Confidence 3577766655 24446677777664432 235777788999999999998432 125555554 555555
Q ss_pred HHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEecccc
Q 018240 70 VLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHA 147 (359)
Q Consensus 70 l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~ 147 (359)
+ .++ .+||.|++++|+|.. +. .......|.+++.++.+ .++.+|+++|++.+++. ++++++++.+ ++
T Consensus 113 ~-~l~-~~Gd~Vlv~~P~Y~~-~~-~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~------~~~~~i~l~~-P~ 181 (433)
T PRK06855 113 Y-GLL-RREARVIGPSPAYST-HS-SAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYN------PSIAGILLIN-PD 181 (433)
T ss_pred H-Hhc-CCCCeEEEeCCCCch-HH-HHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcC------CCceEEEEEC-CC
Confidence 5 555 599999999999876 43 11123457777877654 34678999999999731 3578888855 56
Q ss_pred CCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhcCcc-EEEEeccccCCCcee--eEEecC---
Q 018240 148 NCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQAAD-SASVCLSKGLGAPVG--SVIVGS--- 220 (359)
Q Consensus 148 ~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~~~d-~~~~s~~K~~g~~~g--g~~~~~--- 220 (359)
||||.+++.+++++|+++|++||++||+||+|....+.. ...+...+..... +++.|+||.+++|+. ||++.+
T Consensus 182 NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~ 261 (433)
T PRK06855 182 NPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNAD 261 (433)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCc
Confidence 799999999999999999999999999999964332211 1123333322223 444599999986654 888862
Q ss_pred --HHHHHHHHHHHHhhCCCcchhHHHHHHHHHHH-----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEE
Q 018240 221 --KEFIKKARRLRKTLGGGMRQVGVLCAAALVAL-----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVY 293 (359)
Q Consensus 221 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~ 293 (359)
+.+.+.++............+.+.+.++...+ +.++++.++.+.++++.+.+.|++++++.+ .++.++.++|
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~-~~p~gg~~~w 340 (433)
T PRK06855 262 KDEVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKV-NRTNGAFYMT 340 (433)
T ss_pred hhhHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeec-cCCCeeEEEe
Confidence 22233333232221111112334445555454 345555677788899999999988878765 3456788999
Q ss_pred EEeccch-------------------------HHHHHHHHHHH-HhcCceeccCCC-----cEEEEEeCCCCCHHHHHHH
Q 018240 294 FEITEDS-------------------------KLYAACLLKKL-EEHGVLVMPESS-----TRVRIVVHHQISANDVHYT 342 (359)
Q Consensus 294 ~~~~~~~-------------------------~~~~~~~~~~l-~~~gi~~~~~~~-----~~lRi~~~~~~~~~~i~~~ 342 (359)
+.++... ..+..++...+ .++||.+.|+.. .++|++++ ..+++++++.
T Consensus 341 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~-~~~~~~i~~~ 419 (433)
T PRK06855 341 VVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLL-ERDEEKFEWI 419 (433)
T ss_pred eccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEEC-CCcHHHHHHH
Confidence 9997521 00244666554 889999988743 35999997 3689999999
Q ss_pred HHHHHHHHHHH
Q 018240 343 LSCFQKIYAGV 353 (359)
Q Consensus 343 ~~~l~~~~~~~ 353 (359)
+++|.++++++
T Consensus 420 ~~~l~~~~~~~ 430 (433)
T PRK06855 420 YQTLAEKIEEY 430 (433)
T ss_pred HHHHHHHHHHH
Confidence 99999999864
No 63
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=2.6e-31 Score=241.90 Aligned_cols=314 Identities=14% Similarity=0.125 Sum_probs=214.8
Q ss_pred CccCCChHHHHHHHHHHHHhCCC-------CeEEcC-CchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCc
Q 018240 32 DVLMHDPTAFRLETEMAKVMGKE-------AGLFVP-SGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGV 103 (359)
Q Consensus 32 ~~~~~~~~~~~l~~~la~~~~~~-------~~~~~~-~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~ 103 (359)
..|+...+..+++++++++++.. ..++++ |+++++..++.+++..+||.|+++.|+|.... ..++..|.
T Consensus 109 ~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~---~~~~~~g~ 185 (481)
T PTZ00377 109 GAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYS---AAITLLGG 185 (481)
T ss_pred cCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHH---HHHHHcCC
Confidence 45888888999999999998532 225444 55566666766666348999999999977644 34778888
Q ss_pred cceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEeccccc
Q 018240 104 HPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIF 181 (359)
Q Consensus 104 ~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~ 181 (359)
+++.++.++ ++.+|+++|++.++..... ..+++++++.+ ++||||.+++.+++++|+++|++||++||+||+|..
T Consensus 186 ~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~--~~~~k~l~l~~-P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~ 262 (481)
T PTZ00377 186 KQVPYYLDEEKGWSLDQEELEEAYEQAVRN--GITPRALVVIN-PGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQE 262 (481)
T ss_pred EEEEEEeccccCCCCCHHHHHHHHHHHHhc--CCCeeEEEEEC-CCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHh
Confidence 999987653 4678999999998731000 02788888865 467999999999999999999999999999999643
Q ss_pred chhhh--cCchhHh----hhcC----ccEEEE-eccccC-CCcee--eEEec---CHHHHHHHHHHHHhhCCCcchhHHH
Q 018240 182 NAAVA--LGVPVRR----LVQA----ADSASV-CLSKGL-GAPVG--SVIVG---SKEFIKKARRLRKTLGGGMRQVGVL 244 (359)
Q Consensus 182 ~~~~~--~~~~~~~----~~~~----~d~~~~-s~~K~~-g~~~g--g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (359)
..+.. ...+... +... ..++++ |+||.+ +.|+. ||+++ ++++++.+...... ..+. +...
T Consensus 263 l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~-~~~~--~~~~ 339 (481)
T PTZ00377 263 NIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASI-NLCS--NVVG 339 (481)
T ss_pred hccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhhe-ecCC--ChHH
Confidence 22210 1112222 1111 125555 999974 64433 88775 89999988765532 2122 3334
Q ss_pred HHHHHHHHH----------HhHH---HHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHH---------
Q 018240 245 CAAALVALQ----------ENVL---VMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKL--------- 302 (359)
Q Consensus 245 ~~~~~~~l~----------~~~~---~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~--------- 302 (359)
+.++...++ .+.+ ..+..+.++++.+.+.|++++|+.+. .+.+++++|+.++.+.+.
T Consensus 340 Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~-~p~gg~fl~~~~~l~~~~~~~~~~~~~ 418 (481)
T PTZ00377 340 QLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQ-PVEGAMYAFPRIELPEKAIQEAKERGL 418 (481)
T ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEee-cCCeeEEEEeeccCchhhHHHHHhcCC
Confidence 444443331 1222 12334678889999999998888875 455788899776432111
Q ss_pred -HHHHHH-HHHHhcCceeccCC-------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhhc
Q 018240 303 -YAACLL-KKLEEHGVLVMPES-------STRVRIVVHHQISANDVHYTLSCFQKIYAGVCEEN 357 (359)
Q Consensus 303 -~~~~~~-~~l~~~gi~~~~~~-------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 357 (359)
+...++ ..|.++||.++|++ ..++|+++. .+++++++++++|.++++++.++.
T Consensus 419 ~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~--~~~e~l~~~l~rl~~~~~~~~~~~ 480 (481)
T PTZ00377 419 APDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL--PPEEQIEEMVKKIKEFHESFMKKY 480 (481)
T ss_pred CcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHHHhh
Confidence 123344 44588999998763 247999995 778899999999999999887764
No 64
>PLN02231 alanine transaminase
Probab=100.00 E-value=2.6e-31 Score=241.86 Aligned_cols=345 Identities=16% Similarity=0.177 Sum_probs=231.5
Q ss_pred cccccccCCCCCChHHHHHHHHHcCCC--C--CCccCCChHHHHHHHHHHHHhCCC-------CeEEc-CCchHHHHHHH
Q 018240 3 TRTVDLRSDTVTKPTEAMRAAMASAEV--D--DDVLMHDPTAFRLETEMAKVMGKE-------AGLFV-PSGTMGNLISV 70 (359)
Q Consensus 3 ~~~id~~~~~~~~~~~~~~~a~~~~~~--~--~~~~~~~~~~~~l~~~la~~~~~~-------~~~~~-~~gt~a~~~~l 70 (359)
+..|+|..+...+|...+.++...... + ...|+.+.+..++++.+++++... ..+++ +|+++++..++
T Consensus 129 p~~i~~~~~~~~fp~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~ 208 (534)
T PLN02231 129 PSLLDKSETHGLFSADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMM 208 (534)
T ss_pred CccCCCCCccccCCHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHH
Confidence 346788776677777555555432211 1 345888899999999999988432 12544 45556666777
Q ss_pred HHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccC
Q 018240 71 LVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHAN 148 (359)
Q Consensus 71 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ 148 (359)
..++..+||.|+++.|+|.. +. ..+...|.+++.++.++ +|.+|+++|++.+++.... ..+++++++.+| +|
T Consensus 209 ~~l~~~~gd~Vli~~P~Y~~-y~--~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~--~~~~k~ivl~nP-~N 282 (534)
T PLN02231 209 QLLIRSEKDGILCPIPQYPL-YS--ASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSK--GITVRALVVINP-GN 282 (534)
T ss_pred HHhccCCCCEEEEeCCCChh-HH--HHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhc--CCCeEEEEEeCC-CC
Confidence 77764479999999999765 44 34777888999987654 4789999999998742110 126888888555 66
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh--cCchhHhhhc-------CccEEEE-eccccC-CCcee--e
Q 018240 149 CGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA--LGVPVRRLVQ-------AADSASV-CLSKGL-GAPVG--S 215 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~--~~~~~~~~~~-------~~d~~~~-s~~K~~-g~~~g--g 215 (359)
|||.+++.+++++|+++|++||++||+||+|....+.. ...++..+.. ...++++ |+||.+ |.|+. |
T Consensus 283 PTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiG 362 (534)
T PLN02231 283 PTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGG 362 (534)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceE
Confidence 99999999999999999999999999999964432210 1113333311 1235666 999976 54432 7
Q ss_pred EEec---CHHHHHHHHHHHHhhCCCcchhHHHHHHHHH--------HHHHhHH---HHhhhHHHHHHHHHHHHhcCCCce
Q 018240 216 VIVG---SKEFIKKARRLRKTLGGGMRQVGVLCAAALV--------ALQENVL---VMLDGDHKKAKLLAEGLNQLKGLR 281 (359)
Q Consensus 216 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~~~---~~~~~~~~~~~~l~~~l~~~~g~~ 281 (359)
|++. ++++.+.+...... ..+.......++.... .++.+.+ ..++.+.++++.+.+.|++++|+.
T Consensus 363 y~~~~~~~~~l~~~l~k~~~~-~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~ 441 (534)
T PLN02231 363 YMEVTGFTSDVREQIYKVASV-NLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVT 441 (534)
T ss_pred EEEEecCCHHHHHHHHHHHhh-hcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 7764 78888888765442 2222222222222211 2222222 245678889999999999988988
Q ss_pred EecCCccceEEEEEeccchH-HH---------HHHHHHHH-HhcCceeccCC-------CcEEEEEeCCCCCHHHHHHHH
Q 018240 282 VDVDAVETNIVYFEITEDSK-LY---------AACLLKKL-EEHGVLVMPES-------STRVRIVVHHQISANDVHYTL 343 (359)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~l-~~~gi~~~~~~-------~~~lRi~~~~~~~~~~i~~~~ 343 (359)
+. ++.++.++|.++..+.. .+ ...++.+| .++||.++|+. ..++|+++ ..+++++++.+
T Consensus 442 ~~-~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~--~~~~e~l~eal 518 (534)
T PLN02231 442 CN-KAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTI--LPQEDKIPAIV 518 (534)
T ss_pred ec-CCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEe--CCCHHHHHHHH
Confidence 74 45688888855542111 11 22355656 68899998874 23599998 57899999999
Q ss_pred HHHHHHHHHHHhhc
Q 018240 344 SCFQKIYAGVCEEN 357 (359)
Q Consensus 344 ~~l~~~~~~~~~~~ 357 (359)
++|.++++++.++.
T Consensus 519 ~RL~~~~~~~~~~~ 532 (534)
T PLN02231 519 SRLTEFHKSFMDEF 532 (534)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999887654
No 65
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=3e-32 Score=239.40 Aligned_cols=315 Identities=20% Similarity=0.224 Sum_probs=226.9
Q ss_pred cccccccCCCCC-ChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC-e-EEcCCchHHHHHHHHHhhhhcCC
Q 018240 3 TRTVDLRSDTVT-KPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA-G-LFVPSGTMGNLISVLVHCETRGS 79 (359)
Q Consensus 3 ~~~id~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~-~~~~~gt~a~~~~l~~~~~~~g~ 79 (359)
..+|||.++.+. .++|.+.+++.+.......|+... ..++|+.++++++.+. . ++++|+++++..++..++ ++|+
T Consensus 19 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~-~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~-~~gd 96 (346)
T TIGR01141 19 KEVIKLNSNENPFGPPPKAKEALRAEADKLHRYPDPD-PAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFL-EPGD 96 (346)
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHhHHHhhcCCCCC-HHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhc-CCCC
Confidence 357999877655 455889999988643334455434 4899999999999653 3 455555567767777776 5899
Q ss_pred eEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhH
Q 018240 80 EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYT 159 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l 159 (359)
+|++++|+|.. +. ..+...|.+++.++.+.++.+|++++++.++ +++++|+++++ +||||..++.+++
T Consensus 97 ~v~~~~p~y~~-~~--~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~--------~~~~~v~l~~p-~NptG~~~~~~~~ 164 (346)
T TIGR01141 97 AVLVPPPTYSM-YE--ISAKIHGAEVVKVPLDEDGQLDLEDILVAID--------DKPKLVFLCSP-NNPTGNLLSRSDI 164 (346)
T ss_pred EEEEcCCCHHH-HH--HHHHHcCCeEEEeccCCCCCCCHHHHHHhcC--------CCCCEEEEeCC-CCCCCCCCCHHHH
Confidence 99999999654 43 3367789999999887778899999999876 68899998655 6699999998777
Q ss_pred HHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCcc-EEEEeccccCCCce-e-eEEecCHHHHHHHHHHHHhhCC
Q 018240 160 DSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAAD-SASVCLSKGLGAPV-G-SVIVGSKEFIKKARRLRKTLGG 236 (359)
Q Consensus 160 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d-~~~~s~~K~~g~~~-g-g~~~~~~~~~~~~~~~~~~~~~ 236 (359)
.++++.++ +++++|+|++|.. +...+..........+ ++..|+||++|.++ + ||++.++++.++++.....++
T Consensus 165 ~~l~~~~~-~~~~ii~D~~y~~--~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~- 240 (346)
T TIGR01141 165 EAVLERTP-EDALVVVDEAYGE--FSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAPFN- 240 (346)
T ss_pred HHHHHhCC-CCcEEEEECchhh--hcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccCCCC-
Confidence 77777776 6999999999642 2111111111111234 44559999997653 2 889999999888765543322
Q ss_pred CcchhHHHHHHHHHHHHH--hHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhc
Q 018240 237 GMRQVGVLCAAALVALQE--NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEH 314 (359)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 314 (359)
.+...+.++...++. ..+..++++.++++++++.|++++|+++. +..+.++|+.++. +.+++.++|.++
T Consensus 241 ---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~g~~~~~~~~~----~~~~~~~~L~~~ 311 (346)
T TIGR01141 241 ---LSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVY--PSDANFVLIRFPR----DADALFEALLEK 311 (346)
T ss_pred ---CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC--CCcCCEEEEecCC----CHHHHHHHHHHC
Confidence 233344444444432 34446677888899999999988888753 3467889988864 567899999999
Q ss_pred CceeccCC-----CcEEEEEeCCCCCHHHHHHHHHHHH
Q 018240 315 GVLVMPES-----STRVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 315 gi~~~~~~-----~~~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
||.+.++. .+++|++++ ++++++++++.|+
T Consensus 312 gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 312 GIIVRDLNSYPGLPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred CeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHhC
Confidence 99998764 478999984 7899999998773
No 66
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-31 Score=237.70 Aligned_cols=323 Identities=16% Similarity=0.171 Sum_probs=224.2
Q ss_pred ccccccCCCCCChH-HHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHh----CC---C-CeEE-cCCchHHHHHHHH
Q 018240 4 RTVDLRSDTVTKPT-EAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVM----GK---E-AGLF-VPSGTMGNLISVL 71 (359)
Q Consensus 4 ~~id~~~~~~~~~~-~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~----~~---~-~~~~-~~~gt~a~~~~l~ 71 (359)
..|||..+++..+. +.+.+++.+.... ...|+...+..++++++++++ +. + ..++ ++|+++++..++.
T Consensus 36 ~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~ 115 (394)
T PRK05942 36 DLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLAL 115 (394)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHH
Confidence 46899988776544 4455555443222 245776677889999999987 32 2 2355 4555667777777
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC
Q 018240 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC 149 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p 149 (359)
+++ .+||+|++++|+|..... .+...|.+++.++.+. ++.+|++++++.++ +++++|++++| +||
T Consensus 116 ~~~-~~gd~Vlv~~P~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~--------~~~k~i~l~~P-~NP 182 (394)
T PRK05942 116 AYV-NPGDVVLVPSPAYPAHFR---GPLIAGAQIYPIILKPENDWLIDLSSIPEEVA--------QQAKILYFNYP-SNP 182 (394)
T ss_pred HhC-CCCCEEEEcCCCCcchHH---HHHHcCCEEEEeecCCccCCccCHHHHHHhcc--------ccceEEEEcCC-CCC
Confidence 776 599999999999876553 2567888988887653 35689999999887 78999999644 679
Q ss_pred CceecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhcCcc--EEEEeccccCCCcee--eEEecCHHHH
Q 018240 150 GGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQAAD--SASVCLSKGLGAPVG--SVIVGSKEFI 224 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~~~d--~~~~s~~K~~g~~~g--g~~~~~~~~~ 224 (359)
||.+++.+++++|.++|+++|++||+||+|....... ...+...+....+ +++.|+||.||.|+. ||++++++++
T Consensus 183 tG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~ 262 (394)
T PRK05942 183 TTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHII 262 (394)
T ss_pred CCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHHHH
Confidence 9999999999999999999999999999965433211 1112222221122 445599999986543 8999999999
Q ss_pred HHHHHHHHhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchH
Q 018240 225 KKARRLRKTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSK 301 (359)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 301 (359)
+.++........+.+ ...+.++...+ +.+.++.++++.++++.+.+.|++. ++.+. ++..+.++|+.++..
T Consensus 263 ~~l~~~~~~~~~~~~--~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~~~~~~f~~~~~~~~-- 336 (394)
T PRK05942 263 QGLRTLKTNLDYGIF--SALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIP-PTKATMYLWVPCPVG-- 336 (394)
T ss_pred HHHHHHHhhcccCCC--HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCeeeEEEEECCCC--
Confidence 998876654443332 23333333333 3455556777888889999999887 77764 344666899998752
Q ss_pred HHHHHHHHHH-HhcCceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHH
Q 018240 302 LYAACLLKKL-EEHGVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 302 ~~~~~~~~~l-~~~gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
.+..++..++ .++||.+.++ +..++|+++. .+.+.+.+.+++|.
T Consensus 337 ~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~ 387 (394)
T PRK05942 337 MGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI--ADCDRLGEALDRLK 387 (394)
T ss_pred CCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHH
Confidence 3556676655 7899999765 2468999995 44555555555554
No 67
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=1.6e-31 Score=238.90 Aligned_cols=326 Identities=18% Similarity=0.155 Sum_probs=234.3
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCC---CCccCC-------ChHHHHHHHHHHHHhCCC--Ce-EEcCCchHHHHHHH
Q 018240 4 RTVDLRSDTVTKPTEAMRAAMASAEVD---DDVLMH-------DPTAFRLETEMAKVMGKE--AG-LFVPSGTMGNLISV 70 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~---~~~~~~-------~~~~~~l~~~la~~~~~~--~~-~~~~~gt~a~~~~l 70 (359)
+.++|++...+.+++.+.+++.+.... ...++. .....++++.+++++|.+ .. ++++|+|+++..++
T Consensus 16 ~~iyld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~ 95 (398)
T TIGR03392 16 GTVYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINLVA 95 (398)
T ss_pred CeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHH
Confidence 468888888887778888888664321 111111 233577999999999984 23 56777778888888
Q ss_pred HHhh---hhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018240 71 LVHC---ETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 71 ~~~~---~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
.++. .++|++|++++++|++.+... ..++..|++++.++.+.++.+|++++++.++ +++++|+++++
T Consensus 96 ~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~--------~~t~lv~i~~~- 166 (398)
T TIGR03392 96 QSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLT--------PRTRILALGQM- 166 (398)
T ss_pred HHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhc--------cCceEEEEECc-
Confidence 7763 258999999999997753200 2356789999999887778889999999998 78999998654
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHH
Q 018240 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIK 225 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~ 225 (359)
+||||...| +++|.++|+++|+++++|++|+.+... .....+ ++|++++|+||.+| |.| |+++.++++.+
T Consensus 167 ~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~~---~~~~~~--~~d~~~~s~~K~~g-p~G~G~l~~~~~~~~ 237 (398)
T TIGR03392 167 SNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHGP---PDVQAL--DIDFYAFSGHKLYG-PTGIGVLYGKTELLE 237 (398)
T ss_pred cccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCCC---CChhhc--CCCEEEEecccccC-CCceEEEEEcHHHHh
Confidence 559999987 789999999999999999998654432 222232 68999999999777 556 89999988877
Q ss_pred HHHHHHH--------------------hh-CCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCc
Q 018240 226 KARRLRK--------------------TL-GGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGL 280 (359)
Q Consensus 226 ~~~~~~~--------------------~~-~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~ 280 (359)
.+..... .+ .++... ....+...+++ ...+...++..+.++++.+.|+++|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~--~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~ 315 (398)
T TIGR03392 238 AMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNI--AGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGF 315 (398)
T ss_pred hCCCeecCCceEeeccccccccCCChhhccCCCCCH--HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 6532110 00 011111 11222222232 223335566777889999999998898
Q ss_pred eEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC------------CcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018240 281 RVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES------------STRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~------------~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
++... ...+++.+.++. .+.+++.+.|.++||.+.++. .+++|++++..++++|++++++.|++
T Consensus 316 ~~~~~-~~~~i~~~~~~~---~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~ 391 (398)
T TIGR03392 316 RSFRC-PGSSLLAFDFAG---VHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGA 391 (398)
T ss_pred EEeCC-CCCcEEEEEeCC---cCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHH
Confidence 87533 345677777654 366789999999999996653 46899999999999999999999999
Q ss_pred HHHHH
Q 018240 349 IYAGV 353 (359)
Q Consensus 349 ~~~~~ 353 (359)
+++++
T Consensus 392 ~~~~~ 396 (398)
T TIGR03392 392 ALELL 396 (398)
T ss_pred HHHHh
Confidence 88764
No 68
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=1.7e-31 Score=237.78 Aligned_cols=329 Identities=20% Similarity=0.177 Sum_probs=231.6
Q ss_pred cccccccCCCCCChH-HHHHHHHHcCCC-CCCccCCChHHHHHHHHHHHH----hCCC-----CeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSDTVTKPT-EAMRAAMASAEV-DDDVLMHDPTAFRLETEMAKV----MGKE-----AGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~~~~~~~-~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~----~~~~-----~~~~~~~gt~a~~~~l~ 71 (359)
+..+||..+.+..+. +.+.+++.+... ....|...++..++++.++++ +|.+ ..++++||++++..++.
T Consensus 24 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 103 (387)
T PRK07777 24 TGAVNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVL 103 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHH
Confidence 456888887655333 445555554332 234577777888999998876 4543 24566677788888888
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC---CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccC
Q 018240 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ---DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHAN 148 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ 148 (359)
.++ .+||+|+++.|+|.... ..+...|.+++.++.++ ++.+|++++++.++ +++++|++++ ++|
T Consensus 104 ~~~-~~gd~vli~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~--------~~~~~v~l~~-p~N 170 (387)
T PRK07777 104 GLV-EPGDEVLLIEPYYDSYA---AVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVT--------PRTRALIVNS-PHN 170 (387)
T ss_pred Hhc-CCCCEEEEeCCCchhhH---HHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcC--------cccEEEEEcC-CCC
Confidence 776 59999999999976644 33667788888886643 35689999999887 6788999865 567
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhh--cCccEEEEeccccCCCcee--eEEecCHHH
Q 018240 149 CGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLV--QAADSASVCLSKGLGAPVG--SVIVGSKEF 223 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~--~~~d~~~~s~~K~~g~~~g--g~~~~~~~~ 223 (359)
|||.+++.+++++|.++|+++++++|+|++|....+... ..+...+. .+.++++.|+||.||.|+. ||+++++++
T Consensus 171 PtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l 250 (387)
T PRK07777 171 PTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPL 250 (387)
T ss_pred CCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHH
Confidence 999999999999999999999999999999754332111 11222221 1234556699999986543 899999999
Q ss_pred HHHHHHHHHhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccch
Q 018240 224 IKKARRLRKTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDS 300 (359)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 300 (359)
++.+...........+.. .+.++...+ +.+.+..++.+.++++.+.+.|++. ++++. ++..+.++|+.++...
T Consensus 251 ~~~~~~~~~~~~~~~~~~--~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~g~~~~~~~~~~~~ 326 (387)
T PRK07777 251 IAAVRAAKQYLTYVGGAP--FQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEA-GFEVH-DSAGTYFLCADPRPLG 326 (387)
T ss_pred HHHHHHHHhhcccCCCCH--HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC-CCCcc-CCCcceEEEecccccC
Confidence 988876655433333222 222332333 3445556677888999999999997 87764 3446778888875311
Q ss_pred HHHHHHHHHHH-HhcCceeccCC---------CcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 301 KLYAACLLKKL-EEHGVLVMPES---------STRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 301 ~~~~~~~~~~l-~~~gi~~~~~~---------~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
..+..+++++| +++||.+.|+. ..++|++++ .+++++++.+++|.++.
T Consensus 327 ~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~--~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 327 YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFC--KRDDTLDEAIRRLRALR 384 (387)
T ss_pred CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEec--CCHHHHHHHHHHHHHHh
Confidence 12678899999 57899997653 347999995 57899999999997654
No 69
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=2.5e-31 Score=237.51 Aligned_cols=330 Identities=15% Similarity=0.144 Sum_probs=234.2
Q ss_pred ccccccCCCCC-----ChHHHHHHHHHcCCCCC--CccCCChHHHHHHHHHHHHhCCC--------CeEEcCCchHHHHH
Q 018240 4 RTVDLRSDTVT-----KPTEAMRAAMASAEVDD--DVLMHDPTAFRLETEMAKVMGKE--------AGLFVPSGTMGNLI 68 (359)
Q Consensus 4 ~~id~~~~~~~-----~~~~~~~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~~~~--------~~~~~~~gt~a~~~ 68 (359)
..|+|..+.+. .|.+.+.+++.+..... ..|+..++..++++.++++++.. ..++++|+++++..
T Consensus 32 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~ 111 (403)
T TIGR01265 32 PIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEI 111 (403)
T ss_pred CeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHH
Confidence 57889888763 45588888887654332 34666778899999999999852 23666777888888
Q ss_pred HHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018240 69 SVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 69 ~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
++.+++ .+|++|++++|+|... . ..+...|.+++.++.+ .++.+|++.+++.++ +++++++++++
T Consensus 112 ~~~~l~-~~gd~Vlv~~p~y~~~-~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--------~~~~~v~i~~p- 178 (403)
T TIGR01265 112 CIEALA-NPGANILVPRPGFPLY-D--TRAAFSGLEVRLYDLLPEKDWEIDLDGLEALAD--------EKTVAIVVINP- 178 (403)
T ss_pred HHHHhC-CCCCEEEEeCCCchhH-H--HHHHHcCCEEEEecCCcccCCccCHHHHHHHhC--------cCccEEEEecC-
Confidence 888887 5999999999997653 3 3367778888887653 356789999999887 67888888665
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhcCccEEEE-eccccCCCcee--eEEecC-H
Q 018240 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQAADSASV-CLSKGLGAPVG--SVIVGS-K 221 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~~~d~~~~-s~~K~~g~~~g--g~~~~~-~ 221 (359)
+||||.+++.+++++|.++|+++|+++|+|++|....+.. ...+...+.....++++ |+||.|+.|+- ||++++ +
T Consensus 179 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~ 258 (403)
T TIGR01265 179 SNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDP 258 (403)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCc
Confidence 5699999999999999999999999999999965332221 11233333323345555 99999877643 787763 2
Q ss_pred -H-----HHHHHHHHHHhhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceE
Q 018240 222 -E-----FIKKARRLRKTLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNI 291 (359)
Q Consensus 222 -~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~ 291 (359)
+ +.+.+...... ....+...+.++...++ .+.++.++++.++++.+.+.|+.++++.+. .+.++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~---~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~p~~g~f 334 (403)
T TIGR01265 259 HGIFRDTVLQGLKNLLQR---ILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCP-KPEGAMY 334 (403)
T ss_pred hhhhHHHHHHHHHHHhhh---hcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-CCCceeE
Confidence 2 33333333221 11223344444444442 445556777888889999999988787753 3568999
Q ss_pred EEEEeccch---HHHHHHHHHHH-HhcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 292 VYFEITEDS---KLYAACLLKKL-EEHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 292 ~~~~~~~~~---~~~~~~~~~~l-~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
+|++++... ..+..++.+.| .++||.+.|+. .+++||+++ .+++.+++.+++|.+++++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~--~~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 335 LMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITIT--VPESMLEEACSRIKEFCER 401 (403)
T ss_pred EEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 999986420 01466787886 78999998764 468999995 5688899999999888765
No 70
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-32 Score=227.68 Aligned_cols=323 Identities=19% Similarity=0.179 Sum_probs=225.5
Q ss_pred ccCCCCCChH-HHHHHHHHcCCCC--CCcc----CCChHHHHHHHHHHHHhCCC----CeE-EcCCchHHHHHHHHHhhh
Q 018240 8 LRSDTVTKPT-EAMRAAMASAEVD--DDVL----MHDPTAFRLETEMAKVMGKE----AGL-FVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 8 ~~~~~~~~~~-~~~~~a~~~~~~~--~~~~----~~~~~~~~l~~~la~~~~~~----~~~-~~~~gt~a~~~~l~~~~~ 75 (359)
|..+.+..|. +-+.+++.+.... ...| |..+....|++.+++++|.. +.+ ++.++.+++..++.+++.
T Consensus 36 LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~ 115 (420)
T KOG0257|consen 36 LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLN 115 (420)
T ss_pred ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcC
Confidence 5555555544 5677777665443 2234 44445555555566655543 235 455556788889999994
Q ss_pred hcCCeEEecCCCcceeeccccccccCCccceeeecC--------CCCCCCHHHHHHHhcCCCCCccCCceeEEEEecccc
Q 018240 76 TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--------QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHA 147 (359)
Q Consensus 76 ~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--------~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~ 147 (359)
+||+|++.+|.|.+.+. ...+.|..++.++.. .++.+|.++++.++. ++|++|++ +++|
T Consensus 116 -~GDeVii~eP~fd~Y~~---~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t--------~kTk~Ii~-ntPh 182 (420)
T KOG0257|consen 116 -PGDEVIVFEPFFDCYIP---QVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKIT--------EKTKAIIL-NTPH 182 (420)
T ss_pred -CCCEEEEecCcchhhhh---HHhhcCCcceeeccccccccccCccccCChHHHHhhcc--------CCccEEEE-eCCC
Confidence 99999999999777553 488888899988554 568899999999999 89999999 5566
Q ss_pred CCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhc--CccEEEEeccccCCCcee--eEEecCHH
Q 018240 148 NCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQ--AADSASVCLSKGLGAPVG--SVIVGSKE 222 (359)
Q Consensus 148 ~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~--~~d~~~~s~~K~~g~~~g--g~~~~~~~ 222 (359)
||||.+++.++|++|+++|++||+++|.|++|.+..+... +.....+.. ...+-+.|++|+||..++ ||+++++.
T Consensus 183 NPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~ 262 (420)
T KOG0257|consen 183 NPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKH 262 (420)
T ss_pred CCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHH
Confidence 6999999999999999999999999999999766544322 223333321 122445599999998666 99999999
Q ss_pred HHHHHHHHHHhhCCCcchhHHHHHHHHHHHH---------HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEE
Q 018240 223 FIKKARRLRKTLGGGMRQVGVLCAAALVALQ---------ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVY 293 (359)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---------~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~ 293 (359)
+....+..........+.+.+.+.++..+.. .+.....+.++++++.|.+.|.++ |+++.. |.+++|+|
T Consensus 263 L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~-p~gayyl~ 340 (420)
T KOG0257|consen 263 LYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTG-PEGAYYLW 340 (420)
T ss_pred hhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCcccc-CCCceEEE
Confidence 9999887776655444333222222222221 233346777999999999999999 999854 56999999
Q ss_pred EEeccc------hHH----HHHHHHHHH-HhcCceeccCCCc-----------EEEEEeCCCCCHHHHHHHHHHHH
Q 018240 294 FEITED------SKL----YAACLLKKL-EEHGVLVMPESST-----------RVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 294 ~~~~~~------~~~----~~~~~~~~l-~~~gi~~~~~~~~-----------~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
..++.. ++. +...+..+| .+.|+.+.|.+.+ .+|+++ .-+++.++..++.|+
T Consensus 341 adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~--~k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 341 ADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCF--CKADETLRKAIERLK 414 (420)
T ss_pred EeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHH--HhhHHHHHHHHHHHh
Confidence 998821 011 334567777 7888888776433 355565 456666666666665
No 71
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=4e-31 Score=236.04 Aligned_cols=335 Identities=18% Similarity=0.146 Sum_probs=232.9
Q ss_pred ccccccCCCCCCh-HHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHh----CC---CC-eEEcC-CchHHHHHHHH
Q 018240 4 RTVDLRSDTVTKP-TEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVM----GK---EA-GLFVP-SGTMGNLISVL 71 (359)
Q Consensus 4 ~~id~~~~~~~~~-~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~----~~---~~-~~~~~-~gt~a~~~~l~ 71 (359)
.+|||..+++..+ ++.+.+++.+.... ...|....+..++++.+++++ |. +. .++++ |+++++..++.
T Consensus 31 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~ 110 (405)
T PRK09148 31 DIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQ 110 (405)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHH
Confidence 5689998877543 46677776654322 235766677899999999987 33 12 35455 55566667777
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018240 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
.++ .+||.|++++|+|..... .+...|++++.++.+.++. +++++++.++... +++++|++++| |||||
T Consensus 111 ~l~-~~gd~Vl~~~P~y~~~~~---~~~~~g~~v~~v~~~~~~~-~~~~l~~~~~~~~-----~~~~~v~l~~P-~NPtG 179 (405)
T PRK09148 111 AIT-APGDVILCPNPSYPIHAF---GFIMAGGVIRSVPAEPDEE-FFPALERAVRHSI-----PKPIALIVNYP-SNPTA 179 (405)
T ss_pred Hhc-CCCCEEEEcCCCCcccHH---HHHhcCCEEEEEeCCCCCC-CccCHHHHHhhcc-----ccceEEEEeCC-CCCCC
Confidence 776 599999999999776543 3677898998887654432 3344555554211 57788888554 66999
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhcCcc-EE-EEeccccCCCcee--eEEecCHHHHHH
Q 018240 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQAAD-SA-SVCLSKGLGAPVG--SVIVGSKEFIKK 226 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~~~d-~~-~~s~~K~~g~~~g--g~~~~~~~~~~~ 226 (359)
.+++.+++++|.++|++||++||+||+|....+... ..+...+....+ ++ +.|+||.+|.|+. ||+++++++++.
T Consensus 180 ~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~ 259 (405)
T PRK09148 180 YVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERLIAA 259 (405)
T ss_pred cCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCHHHHHH
Confidence 999999999999999999999999999654322110 112222221123 33 5599999996653 999999999999
Q ss_pred HHHHHHhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccch-HH
Q 018240 227 ARRLRKTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDS-KL 302 (359)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~ 302 (359)
+.........+.+ ...+.++...+ +.+.+..++.+.++++.+.+.|++. ++.+. .+..++++|+.++... ..
T Consensus 260 l~~~~~~~~~~~~--~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~-~p~~g~f~~~~l~~~~~~~ 335 (405)
T PRK09148 260 LTRVKSYLDYGAF--TPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA-GWDIP-PPAASMFAWAPIPEAFRHL 335 (405)
T ss_pred HHHHHHHhccCCC--hHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCccC-CCCeeEEEEEECCCccCCC
Confidence 8877665444432 23333333344 3445556677888999999999987 77653 3568889999987521 12
Q ss_pred HHHHHHHHH-HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 303 YAACLLKKL-EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 303 ~~~~~~~~l-~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
+..++.+.| .++||.+.|+. ..++||++. .+.+++++.+++|.+++++..+
T Consensus 336 ~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~~~~ 393 (405)
T PRK09148 336 GSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV--ENEQRIRQAARNIKRFLSSADE 393 (405)
T ss_pred CHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHHHH
Confidence 356788877 68999998752 468999995 6889999999999999987754
No 72
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.8e-31 Score=237.50 Aligned_cols=329 Identities=21% Similarity=0.214 Sum_probs=233.6
Q ss_pred ccccccCCCCCC-hHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhC-----CC--CeEEcCCchHHHHHHHHHhhh
Q 018240 4 RTVDLRSDTVTK-PTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMG-----KE--AGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 4 ~~id~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~-----~~--~~~~~~~gt~a~~~~l~~~~~ 75 (359)
++++|+++.+.. +.+.+.+++.+.......|+...+..++++.++++++ .+ ..++++||++++..++..++
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~- 109 (397)
T PRK07568 31 KVYHLNIGQPDIKTPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAIC- 109 (397)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHhcCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHhc-
Confidence 468898887754 3478888887644334457777788999999999984 22 23666677778888877776
Q ss_pred hcCCeEEecCCCcceeeccccccccCCccceeeecCC-C-CC-CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018240 76 TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ-D-GT-MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 76 ~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~-~~-~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
++|++|++++|+|.. +. ..++..|.+++.++.+. + +. .+++++++.++ +++++|++.++ +||||.
T Consensus 110 ~~gd~Vl~~~p~y~~-~~--~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~--------~~~~~v~i~~p-~NPtG~ 177 (397)
T PRK07568 110 DPGDEILVPEPFYAN-YN--GFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT--------PKTKAILISNP-GNPTGV 177 (397)
T ss_pred CCCCEEEEecCCCcc-HH--HHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC--------ccceEEEEECC-CCCCCc
Confidence 599999999998654 43 34677888988887642 2 23 35789999887 67889988665 579999
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc---hhHhhhc-CccEEE-EeccccCCCcee--eEEec-CHHHH
Q 018240 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV---PVRRLVQ-AADSAS-VCLSKGLGAPVG--SVIVG-SKEFI 224 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~---~~~~~~~-~~d~~~-~s~~K~~g~~~g--g~~~~-~~~~~ 224 (359)
+++.+++++|+++|+++|+++|+|++|.... +.+. +...+.. ...+++ .|+||.||+|+. ||+++ +++++
T Consensus 178 ~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~--~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~ 255 (397)
T PRK07568 178 VYTKEELEMLAEIAKKHDLFLISDEVYREFV--YDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELI 255 (397)
T ss_pred cCCHHHHHHHHHHHHHCCcEEEEeccchhcc--cCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHH
Confidence 9999999999999999999999999964322 2222 2223321 223444 499999986433 78777 57788
Q ss_pred HHHHHHHHhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchH
Q 018240 225 KKARRLRKTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSK 301 (359)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 301 (359)
+.+...... ..+. +.+.+.++...+ +.+.++.++.+.++++.+.+.|++++++.+. .+.++.++|++++..
T Consensus 256 ~~~~~~~~~-~~~~--s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~p~g~~~~~~~l~~~-- 329 (397)
T PRK07568 256 AAAMKLCQA-RLSP--PTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVVCE-KPKGAFYIIAKLPVD-- 329 (397)
T ss_pred HHHHHHhhc-cCCC--CcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-CCCcceEEEEecCCC--
Confidence 776544332 1222 333334444444 3445556667888899999999988777664 345677889998752
Q ss_pred HHHHHHHHHHHh------cCceeccCC---------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 018240 302 LYAACLLKKLEE------HGVLVMPES---------STRVRIVVHHQISANDVHYTLSCFQKIYAGVCEE 356 (359)
Q Consensus 302 ~~~~~~~~~l~~------~gi~~~~~~---------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 356 (359)
+..++.++|.+ +||.+.|+. .+++|++++ .+++++++++++|.++++++..+
T Consensus 330 -~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~--~~~~~~~~~~~~l~~~l~~~~~~ 396 (397)
T PRK07568 330 -DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV--LNEEDLKRAMEILKEALEKYNKR 396 (397)
T ss_pred -CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe--CCHHHHHHHHHHHHHHHHHhhcc
Confidence 56788888843 699987642 358999995 57899999999999999887643
No 73
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-31 Score=220.09 Aligned_cols=318 Identities=20% Similarity=0.194 Sum_probs=231.4
Q ss_pred HHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHh----CCC---Ce-EEcCCchHHHHHHHHHhhhhcCCeEEecCCCc
Q 018240 17 TEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVM----GKE---AG-LFVPSGTMGNLISVLVHCETRGSEVILGDNSH 88 (359)
Q Consensus 17 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~~---~~-~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~ 88 (359)
.|++++|+.+.. .+..||++-..+++-+++++|+ +.. .. +++++-..++..++.++. ++||.|++..|.|
T Consensus 40 pp~i~~Al~~rv-dhGvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T-~~gd~Vvi~tPvY 117 (388)
T COG1168 40 PPEIIEALRERV-DHGVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALT-KPGDGVVIQTPVY 117 (388)
T ss_pred CHHHHHHHHHHH-hcCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhC-cCCCeeEecCCCc
Confidence 389999998854 4445665544455666666554 332 12 455566677888888888 6999999999999
Q ss_pred ceeeccccccccCCccceeeecC-C--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHH
Q 018240 89 IHIYENGGISTIGGVHPRTVKNN-Q--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEI 165 (359)
Q Consensus 89 ~~~~~~~~~~~~~g~~~~~v~~~-~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~ 165 (359)
++.+. .....|-+++..|.- + .+.+|.++|++.+.+ .++++++++||+| |||.+++.++|.+|.++
T Consensus 118 ~PF~~---~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~-------~~vkl~iLCnPHN-P~Grvwt~eeL~~i~el 186 (388)
T COG1168 118 PPFYN---AIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD-------ERVKLFILCNPHN-PTGRVWTKEELRKIAEL 186 (388)
T ss_pred hHHHH---HHhhcCcEEEeccccccCCcEEecHHHHHHHHhc-------CCccEEEEeCCCC-CCCccccHHHHHHHHHH
Confidence 99886 366777788877554 3 356799999999996 6678999977666 99999999999999999
Q ss_pred HHHcCcEEEEecccccchhhh-cCchhHhhhc-Ccc-EE-EEeccccCCCcee---eEEecCHHHHHHH-HHHHHhhCCC
Q 018240 166 AKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQ-AAD-SA-SVCLSKGLGAPVG---SVIVGSKEFIKKA-RRLRKTLGGG 237 (359)
Q Consensus 166 ~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~-~~d-~~-~~s~~K~~g~~~g---g~~~~~~~~~~~~-~~~~~~~~~~ 237 (359)
|.+||+.||.||.|+-..+.. .+.+...+.. .+| .+ ..|.||+|..++- -+++.++++..++ +++.......
T Consensus 187 c~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~ 266 (388)
T COG1168 187 CLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHG 266 (388)
T ss_pred HHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHHhcCCC
Confidence 999999999999987655542 2333333321 233 34 4489999976422 4566787775544 4444443333
Q ss_pred cchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhc-CCCceEecCCccceEEEEEeccchHHHHHHHHHHH-H
Q 018240 238 MRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQ-LKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKL-E 312 (359)
Q Consensus 238 ~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ 312 (359)
. +.+...+...++ +.+++..++.+..|.+++++.|.+ +|++++.. |.+++.+|+.+.. .+.+..++.+.| .
T Consensus 267 ~--n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~-p~gTYL~WLD~r~-l~l~d~~l~~~ll~ 342 (388)
T COG1168 267 P--SALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTE-PQGTYLAWLDCRE-LGLDDSELAEFLLE 342 (388)
T ss_pred C--chHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEec-CCCceeeeeeccc-cCCChHHHHHHHHH
Confidence 4 333334445555 456666777788999999999998 58999854 5678889999987 456777888888 7
Q ss_pred hcCceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 313 EHGVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 313 ~~gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+.+|.+.+| +.+++|+.+ .++.+-+++.+++|+.++++.
T Consensus 343 ~akVal~~G~~FG~~g~gf~RlN~--acpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 343 EAKVALSPGSTFGEEGSGFVRLNF--ACPRAILEEALERLKRALKKR 387 (388)
T ss_pred hhcEeccCCCccCcCCCceEEEec--CCCHHHHHHHHHHHHHHHhcc
Confidence 778877554 567899999 799999999999999888754
No 74
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=1.8e-31 Score=239.21 Aligned_cols=330 Identities=18% Similarity=0.204 Sum_probs=238.5
Q ss_pred cccccccCCCCC--ChHHHHHHHHHcCCCCC--------CccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSDTVT--KPTEAMRAAMASAEVDD--------DVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~~~--~~~~~~~~a~~~~~~~~--------~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~ 72 (359)
...++|.|+++. .++|++.+++.+..... ..|+..+...++++.+++++|.+..+++++|++|+..++..
T Consensus 46 ~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai~~ 125 (407)
T PRK09064 46 REVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEAALVFTSGYVSNDATLST 125 (407)
T ss_pred ceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHH
Confidence 346899998775 33588988887643221 12445778899999999999988889999999999999888
Q ss_pred hhh-hcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018240 73 HCE-TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 73 ~~~-~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
+.. .+++.|+.+...|.+... + ....+.++..++.+ |++++++.++... .+++++|+++++.+ ++|
T Consensus 126 l~~~~~~~~i~~~~~~h~s~~~-~--~~~~~~~~~~~~~~-----d~~~le~~l~~~~----~~~~~~v~~~~v~s-~~G 192 (407)
T PRK09064 126 LAKLIPDCVIFSDELNHASMIE-G--IRRSRCEKHIFRHN-----DVAHLEELLAAAD----PDRPKLIAFESVYS-MDG 192 (407)
T ss_pred HhCCCCCCEEEEeCcchHHHHH-H--HHHcCCcEEEECCC-----CHHHHHHHHHhcc----CCCCeEEEEeCCCC-CCc
Confidence 763 256656666667776654 3 45566666656543 8888888887321 03578999977666 899
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh---hcCccEEEEeccccCCCceeeEEecCHHHHHHHH
Q 018240 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL---VQAADSASVCLSKGLGAPVGSVIVGSKEFIKKAR 228 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~ 228 (359)
.+.+ +++|.++|++||+++|+||+|++|.++..+...... ....|+++.|++|.||. .||++++++++++.++
T Consensus 193 ~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~-~GG~~~~~~~~~~~l~ 268 (407)
T PRK09064 193 DIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGV-MGGYIAGSAALVDAVR 268 (407)
T ss_pred cccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhc-cCceEecCHHHHHHHH
Confidence 9887 899999999999999999999766544333332222 12457777899999985 5688889999988876
Q ss_pred HHHHhhCCCcchhHHHHHHHHHHHHHhHH--HHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHH
Q 018240 229 RLRKTLGGGMRQVGVLCAAALVALQENVL--VMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAAC 306 (359)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (359)
.....+..+...++..++++..+++...+ ..+++..++++++.+.|+++ |+++. +..++++++.++.. ..+.+
T Consensus 269 ~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~iv~i~~~~~--~~~~~ 343 (407)
T PRK09064 269 SYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA-GIPVM--PNESHIVPVMVGDP--EKCKK 343 (407)
T ss_pred HhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC--CCCCCEEEEEeCCH--HHHHH
Confidence 55443332333445555556666643322 23567788899999999997 88764 23577777777541 36778
Q ss_pred HHHHHH-hcCceeccC-------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 307 LLKKLE-EHGVLVMPE-------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 307 ~~~~l~-~~gi~~~~~-------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+.++|. ++||.+.+. +..++|++++..++++|++++++.|+++++++.
T Consensus 344 l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~~ 399 (407)
T PRK09064 344 ASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARLG 399 (407)
T ss_pred HHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 999884 679998432 346799999999999999999999999987764
No 75
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=1.4e-31 Score=236.95 Aligned_cols=321 Identities=21% Similarity=0.244 Sum_probs=230.9
Q ss_pred ccccccCCCCCCh--HHHHHHHHHcCCCC-C-------CccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHh
Q 018240 4 RTVDLRSDTVTKP--TEAMRAAMASAEVD-D-------DVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~~~--~~~~~~a~~~~~~~-~-------~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~ 73 (359)
.+|||.++++.++ +|++++++.+.... . ..++..+...++++.++++++.+..+++++|++++..++..+
T Consensus 17 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~~G~~~~~~~l~~~ 96 (360)
T TIGR00858 17 RLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEAALLFSSGYLANVGVISAL 96 (360)
T ss_pred eEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHh
Confidence 5799999876443 37888888764322 1 113445677889999999999888899999999999887777
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee
Q 018240 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC 153 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~ 153 (359)
+ ++||.|++++++|..... + ....|.+++.++. +|++.+++.+++... .++++|++.+ .+|+||..
T Consensus 97 ~-~~gd~v~~~~~~~~~~~~-~--~~~~g~~~~~~~~-----~d~~~l~~~~~~~~~----~~~~~v~~~~-~~~~~G~~ 162 (360)
T TIGR00858 97 V-GKGDLILSDALNHASLID-G--CRLSGARVRRYRH-----NDVEHLERLLEKNRG----ERRKLIVTDG-VFSMDGDI 162 (360)
T ss_pred C-CCCCEEEEEccccHHHHH-H--HHhcCCceEEecC-----CCHHHHHHHHHHccc----CCCeEEEEeC-CccCCCCC
Confidence 6 599999999999887664 2 6677888877753 488999999874100 2467777755 45599987
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh----cCccEEEEeccccCCCceeeEEecCHHHHHHHHH
Q 018240 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV----QAADSASVCLSKGLGAPVGSVIVGSKEFIKKARR 229 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~----~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~ 229 (359)
.+ +++|.++|+++|+++|+||+|..+.....+.+..... .+.++++.|+||+|++ .|||+++++++.+.+..
T Consensus 163 ~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~gG~~~~~~~~~~~~~~ 238 (360)
T TIGR00858 163 AP---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGS-YGAYVAGSQALIDYLIN 238 (360)
T ss_pred cC---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhc-cCcEEEcCHHHHHHHHH
Confidence 66 8999999999999999999987654432222222211 2456777799999986 55888899988887754
Q ss_pred HHHhhCCCcchhHHHHHHHHHHHHHh--HHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHH
Q 018240 230 LRKTLGGGMRQVGVLCAAALVALQEN--VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACL 307 (359)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (359)
....+..+...++...+++..+++.. .+..+++..++++++.+.|+++ ++++. +..++++|+.++. ..+..++
T Consensus 239 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~--~~~~~~~~~~~~~--~~~~~~~ 313 (360)
T TIGR00858 239 RARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEAL-GFTLM--PSCTPIVPVIIGD--NASALAL 313 (360)
T ss_pred hCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-CCccC--CCCCCEEEEEeCC--HHHHHHH
Confidence 43322222222334444444555422 2336677889999999999997 77664 3467889988864 2467789
Q ss_pred HHHHHhcCceeccC-------CCcEEEEEeCCCCCHHHHHHHHHHHH
Q 018240 308 LKKLEEHGVLVMPE-------SSTRVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 308 ~~~l~~~gi~~~~~-------~~~~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
.++|.++||.+.+. +..++|++++..++++++++++++|+
T Consensus 314 ~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 314 AEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred HHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 99999999999542 34589999988889999999999874
No 76
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=2.8e-31 Score=237.66 Aligned_cols=326 Identities=17% Similarity=0.190 Sum_probs=233.8
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCCCC------ccC----CChHHHHHHHHHHHHhCC-CC-e-EEcCCchHHHHHHH
Q 018240 4 RTVDLRSDTVTKPTEAMRAAMASAEVDDD------VLM----HDPTAFRLETEMAKVMGK-EA-G-LFVPSGTMGNLISV 70 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~~~------~~~----~~~~~~~l~~~la~~~~~-~~-~-~~~~~gt~a~~~~l 70 (359)
+.++|++...+.+++.+.+++.+...... .+. ......++++.+++++|. +. . ++++|+|+++..++
T Consensus 19 ~~~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~ 98 (401)
T PRK10874 19 AGVYLDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVA 98 (401)
T ss_pred ceEEEeCCcccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHH
Confidence 46888888888777788888865432211 110 123457889999999998 33 3 55666677777777
Q ss_pred HHhh---hhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018240 71 LVHC---ETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 71 ~~~~---~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
.++. .++|++|+++++.|++.+... ..++..|++++.++.+.++.+|++++++.++ +++++|+++++
T Consensus 99 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~--------~~t~lv~i~~~- 169 (401)
T PRK10874 99 QSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELIT--------PRTRILALGQM- 169 (401)
T ss_pred HHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcC--------cCcEEEEEeCC-
Confidence 7763 258999999999997753200 2356779999999887788899999999998 78999999665
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHH
Q 018240 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIK 225 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~ 225 (359)
+||||...| +++|.++|+++|+++|+|++|+.+... .....+ ++|++++|+||.+| |.| |+++.++++.+
T Consensus 170 ~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~~---~~~~~~--~~d~~~~s~~K~~g-p~G~G~l~~~~~~~~ 240 (401)
T PRK10874 170 SNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHFP---ADVQAL--DIDFYAFSGHKLYG-PTGIGVLYGKSELLE 240 (401)
T ss_pred cccccCcCC---HHHHHHHHHHcCCEEEEECCccccccc---CCchhc--CCCEEEEecccccC-CCccEEEEEchHHHh
Confidence 459999987 789999999999999999998665442 222233 68999999999776 566 99999988877
Q ss_pred HHHHHHH--------------------hh-CCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCc
Q 018240 226 KARRLRK--------------------TL-GGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGL 280 (359)
Q Consensus 226 ~~~~~~~--------------------~~-~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~ 280 (359)
.+..... .+ .++. +.....+...+++ ...+...++..+.++++.+.|+++||+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~--~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~ 318 (401)
T PRK10874 241 AMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTP--NVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGF 318 (401)
T ss_pred cCCCeecCCcceEeeccCccCCCCChhhccCCCc--CHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 6532210 00 0111 1112222223332 222334556667789999999998899
Q ss_pred eEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC------------CcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018240 281 RVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES------------STRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~------------~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
++..+ ...+++++.++. .+.+++.+.|.++||.+.++. .+++|++++..++++|+++++++|++
T Consensus 319 ~~~~~-~~~~i~~~~~~~---~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~ 394 (401)
T PRK10874 319 RSFRC-QDSSLLAFDFAG---VHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDR 394 (401)
T ss_pred EEeCC-CCCcEEEEEECC---cCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHH
Confidence 87543 356677777764 356789999989999986643 46899999999999999999999999
Q ss_pred HHHHH
Q 018240 349 IYAGV 353 (359)
Q Consensus 349 ~~~~~ 353 (359)
+++++
T Consensus 395 ~~~~~ 399 (401)
T PRK10874 395 ALELL 399 (401)
T ss_pred HHHHh
Confidence 88764
No 77
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-31 Score=235.35 Aligned_cols=314 Identities=20% Similarity=0.230 Sum_probs=226.8
Q ss_pred ccccccCCCCC-ChHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhCCCC--eEEcCCchHHHHHHHHHhhhhcC
Q 018240 4 RTVDLRSDTVT-KPTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMGKEA--GLFVPSGTMGNLISVLVHCETRG 78 (359)
Q Consensus 4 ~~id~~~~~~~-~~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l~~~~~~~g 78 (359)
..|+|+.+.+. +|++.+++++.+.... ...|.. +...++++.++++++.+. .+++++|++..+..+..++..+|
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~g 105 (356)
T PRK04870 27 GMVKLDAMENPYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKPG 105 (356)
T ss_pred CceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCCC
Confidence 57889777555 4568999998875432 234554 567899999999999753 47777777655554444433699
Q ss_pred CeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhh
Q 018240 79 SEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEY 158 (359)
Q Consensus 79 ~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~ 158 (359)
|+|++++|+|.. +. ..++..|++++.++.++++.+|++++++.+++ .++++|++++ ++||||.+++.++
T Consensus 106 d~vlv~~P~y~~-~~--~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~-------~~~~~v~l~~-p~NPtG~~~~~~~ 174 (356)
T PRK04870 106 ATVLAPEPGFVM-YR--MSAKLAGLEFVGVPLTADFTLDLPAMLAAIAE-------HRPALVFLAY-PNNPTGNLFDDAD 174 (356)
T ss_pred CEEEECCCCHHH-HH--HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc-------CCCCEEEEcC-CCCCCCCCCCHHH
Confidence 999999999776 44 34788999999998887788999999999974 5789999955 5779999999999
Q ss_pred HHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEE-EeccccCCCcee--eEEecCHHHHHHHHHHHHhhC
Q 018240 159 TDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSAS-VCLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLG 235 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~-~s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~ 235 (359)
+++|+++| ++++|+||+|.. +.... ....+.....+++ .|+|| ++.|+. ||+++++++++.++.....+
T Consensus 175 ~~~i~~~~---~~~ii~De~y~~--~~~~~-~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~~~~- 246 (356)
T PRK04870 175 VERIIEAA---PGLVVVDEAYQP--FAGDS-WLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRPPY- 246 (356)
T ss_pred HHHHHHHC---CCEEEEECCchh--hcCcc-hHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHHHHccCCC-
Confidence 99998888 789999999642 22111 1112222223444 49999 776543 89999999998877654322
Q ss_pred CCcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHh
Q 018240 236 GGMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEE 313 (359)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 313 (359)
+. +...+.++...++ ...++.++++.++++.+.+.|++++++.+. +..++++|+.++. ..++.+.|.+
T Consensus 247 -~~--~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~l~~ 316 (356)
T PRK04870 247 -NV--NVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTVF--PSAANFILVRVPD-----AAAVFDGLKT 316 (356)
T ss_pred -cC--CHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC--CCCCeEEEEECCC-----HHHHHHHHHH
Confidence 22 2233333433442 234446677788899999999998888653 4577899998762 4578888999
Q ss_pred cCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 314 HGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 314 ~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
+||.+.++. .+++|++++ +.++.++++++|++++
T Consensus 317 ~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 317 RGVLVKNLSGMHPLLANCLRVTVG---TPEENAQFLAALKAAL 356 (356)
T ss_pred CCEEEEECCCCCCCCCCeEEEeCC---CHHHHHHHHHHHHHhC
Confidence 999996642 458999994 6899999999998753
No 78
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.1e-31 Score=237.67 Aligned_cols=320 Identities=21% Similarity=0.230 Sum_probs=228.7
Q ss_pred ccccccCC-CCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC-eEEcCCchHHHH-HHHHHhhhhcCCe
Q 018240 4 RTVDLRSD-TVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA-GLFVPSGTMGNL-ISVLVHCETRGSE 80 (359)
Q Consensus 4 ~~id~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~gt~a~~-~~l~~~~~~~g~~ 80 (359)
..+||.++ +..+|+|.+.+++.+.......|... ...++++.++++++.+. .+++++|++.++ .++..++ ++|+.
T Consensus 33 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~-~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l~-~~gd~ 110 (367)
T PRK02731 33 DIIKLASNENPLGPSPKAIEAIRAAADELHRYPDG-SGFELKAALAEKFGVDPERIILGNGSDEILELLARAYL-GPGDE 110 (367)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-cHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhc-CCCCE
Confidence 46899987 45566788888887754333445443 34789999999999864 477777766554 4445555 68999
Q ss_pred EEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHH
Q 018240 81 VILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTD 160 (359)
Q Consensus 81 vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~ 160 (359)
|++++|+|.. +. ..+...|.+++.++. .++.+|++++++.++ +++++|++++ ++||||.+++.+++.
T Consensus 111 vl~~~p~y~~-~~--~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~--------~~~~~v~l~~-p~nptG~~~~~~~l~ 177 (367)
T PRK02731 111 VIYSEHGFAV-YP--IAAQAVGAKPVEVPA-KDYGHDLDAMLAAVT--------PRTRLVFIAN-PNNPTGTYLPAEEVE 177 (367)
T ss_pred EEEecCCHHH-HH--HHHHHcCCeEEEecc-cCCCCCHHHHHHHhC--------CCCcEEEEeC-CCCCCCcCCCHHHHH
Confidence 9999999754 43 236678889998876 457789999999997 6789999865 556999999988888
Q ss_pred HHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhcCccEEE-EeccccCCCcee--eEEecCHHHHHHHHHHHHhhCC
Q 018240 161 SVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQAADSAS-VCLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGG 236 (359)
Q Consensus 161 ~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~~~d~~~-~s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~ 236 (359)
++++.++ +|+++|+|++|........ ......+....++++ .|+||.+|.++. ||+++++++++.++.....++
T Consensus 178 ~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~~~~~~- 255 (367)
T PRK02731 178 RFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRVRQPFN- 255 (367)
T ss_pred HHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCHHHHHHHHHccCCCC-
Confidence 8777764 5999999999754332111 111211112234444 499999986543 899999999988776543322
Q ss_pred CcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhc
Q 018240 237 GMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEH 314 (359)
Q Consensus 237 ~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 314 (359)
. +...+.++...++ .+.++.++.+.++.+.+.+.|++. |+.+. +..++++|+.++.. .+..++.++|.++
T Consensus 256 -~--~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~g~~~~i~~~~~--~~~~~~~~~L~~~ 327 (367)
T PRK02731 256 -V--NSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL-GLEYI--PSVGNFILVDFDDG--KDAAEAYQALLKR 327 (367)
T ss_pred -C--CHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC--CCCceEEEEECCCC--CCHHHHHHHHHHC
Confidence 2 3344445554443 344445666777888999999988 87764 34689999998542 4678999999999
Q ss_pred CceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 315 GVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 315 gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
||.+.++. .+++|++++ +.++++.++++|+++++
T Consensus 328 gI~v~~~~~~~~~~~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 328 GVIVRPVAGYGLPNALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred CEEEEeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHh
Confidence 99997763 457999984 68899999999998764
No 79
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=1.8e-31 Score=235.08 Aligned_cols=314 Identities=19% Similarity=0.154 Sum_probs=225.7
Q ss_pred cccccccCCCCC-ChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCe-E-EcCCchHHHHHHHHHhhhhcCC
Q 018240 3 TRTVDLRSDTVT-KPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAG-L-FVPSGTMGNLISVLVHCETRGS 79 (359)
Q Consensus 3 ~~~id~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-~-~~~~gt~a~~~~l~~~~~~~g~ 79 (359)
+..++|+.+.+. +|+|.+.+++.+.......|+.. ...++++.+++++|.+.. + +++|+++++..++..++ ++||
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~-~~gd 120 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAALSGRYDLE-LEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFT-SPTA 120 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCc-hHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHc-CCCC
Confidence 456888887664 45688888887654333346544 388999999999987643 4 45555667777777776 5999
Q ss_pred eEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhH
Q 018240 80 EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYT 159 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l 159 (359)
+|++++|+|..... .++..|.+++.++.+.++.+|++++++. . ++++++++++ +|||||.+++.+++
T Consensus 121 ~Vli~~P~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~-~--------~~~~~v~l~n-P~NPTG~~~~~~~l 187 (370)
T PRK09105 121 GLVTADPTYEAGWR---AADAQGAPVAKVPLRADGAHDVKAMLAA-D--------PNAGLIYICN-PNNPTGTVTPRADI 187 (370)
T ss_pred EEEEeCCChHHHHH---HHHHcCCeEEEecCCCCCCCCHHHHHhc-C--------CCCCEEEEeC-CCCCCCcCcCHHHH
Confidence 99999999776543 4778899999998777788899998865 3 4678888855 56799999999999
Q ss_pred HHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh-cCccEEEE-eccccCCCcee--eEEecCHHHHHHHHHHHHhhC
Q 018240 160 DSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV-QAADSASV-CLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLG 235 (359)
Q Consensus 160 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~d~~~~-s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~ 235 (359)
+++.+.+ ++++++|+||+|... .. ..+...+. ...+++++ |+||.||.++. ||+++++++++.+... . .
T Consensus 188 ~~l~~~~-~~~~~lIvDEaY~~f--~~-~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~-~--~ 260 (370)
T PRK09105 188 EWLLANK-PAGSVLLVDEAYIHF--SD-APSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF-G--H 260 (370)
T ss_pred HHHHHhC-CCCcEEEEECchHHh--cc-CcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc-C--C
Confidence 9998875 459999999997432 11 22223332 23456665 99999987653 8999999999887654 1 1
Q ss_pred CCcchhHHHHHHHHHHH--HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHh
Q 018240 236 GGMRQVGVLCAAALVAL--QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEE 313 (359)
Q Consensus 236 ~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 313 (359)
+..+...+.++...+ ..+.+..++++.++++++.+.|+++ ++++. +..++++++.++. +..++.+.|.+
T Consensus 261 --~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~~f~~~~~~~----~~~~l~~~L~~ 331 (370)
T PRK09105 261 --NPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK-GYKCT--PSQANCFMVDVKR----PAKAVADAMAK 331 (370)
T ss_pred --CCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcC--CCCCcEEEEeCCC----CHHHHHHHHHH
Confidence 112333344444444 3445556677888899999999997 88764 2356676776653 56789999988
Q ss_pred cCceecc---CCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 314 HGVLVMP---ESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 314 ~gi~~~~---~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
+||.+.. ...+++|+++. +++++++++++|++++
T Consensus 332 ~gI~v~~~~~~~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 332 QGVFIGRSWPIWPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred CCcEEecCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 8998831 23578999984 5788999999998765
No 80
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5e-31 Score=235.52 Aligned_cols=332 Identities=16% Similarity=0.123 Sum_probs=234.1
Q ss_pred ccccccCCCCCCh-HHHHHHHHHcCCC-CCCccCCChHHHHHHHHHHHHh----CCCC---eEEcCC-chHHHHHHHHHh
Q 018240 4 RTVDLRSDTVTKP-TEAMRAAMASAEV-DDDVLMHDPTAFRLETEMAKVM----GKEA---GLFVPS-GTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~~~-~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~~----~~~~---~~~~~~-gt~a~~~~l~~~ 73 (359)
..+||..+.+..+ ++.+.+++.+... ....|....+..++++.+++++ |.+. .+++++ +++|+..++..+
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~ 113 (402)
T PRK06107 34 SIVDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMAT 113 (402)
T ss_pred CEEEcCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHh
Confidence 4588888877654 3777777776443 2334666667778888777765 4432 255555 567777777766
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018240 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
+ ++||.|++++|+|..... .....+..++.++.+ .++.+|++++++.++ +++++|+++++ +||||
T Consensus 114 ~-~~gd~vl~~~p~y~~y~~---~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~--------~~~~~v~l~~p-~NPtG 180 (402)
T PRK06107 114 L-EAGDEVIIPAPYWVSYPD---MVLANDGTPVIVACPEEQGFKLTPEALEAAIT--------PRTRWLILNAP-SNPTG 180 (402)
T ss_pred c-CCCCEEEEecCCCcCHHH---HHHHcCCEEEEecCCcccCCCCCHHHHHhhcC--------cCceEEEEECC-CCCCC
Confidence 6 599999999998665432 245556677777654 345689999999887 67888888655 66999
Q ss_pred eecChhhHHHHHHHHHHc-CcEEEEecccccchhhh-cCchhHhhhcC--ccEEEE-eccccCCCcee--eEEecCHHHH
Q 018240 152 RCLSVEYTDSVGEIAKKH-GLKLHIDGARIFNAAVA-LGVPVRRLVQA--ADSASV-CLSKGLGAPVG--SVIVGSKEFI 224 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~-~~~li~D~a~~~~~~~~-~~~~~~~~~~~--~d~~~~-s~~K~~g~~~g--g~~~~~~~~~ 224 (359)
.+++.+++++++++|+++ ++++|+|++|....+.. ...++..+... ..++++ |+||.||.|+. ||++++++++
T Consensus 181 ~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~~ 260 (402)
T PRK06107 181 AVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLI 260 (402)
T ss_pred cCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHHH
Confidence 999999999999999998 99999999975322211 11222222111 235544 99999986554 9999999999
Q ss_pred HHHHHHHHhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEecc---
Q 018240 225 KKARRLRKTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITE--- 298 (359)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~--- 298 (359)
+.+.......+.+. +.+.+.++...+ +.+.+..++.+.++++.+.+.|++++|+++. ++..+.++|+.++.
T Consensus 261 ~~~~~~~~~~~~~~--s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~-~p~gg~~~~~~~~~~~~ 337 (402)
T PRK06107 261 AAINKLQSQSSSCP--SSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLSCL-VPDGAFYLYVNCAGLIG 337 (402)
T ss_pred HHHHHHHHhcccCC--ChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCccc-CCCcceEEeeecccccc
Confidence 99887776555444 444445554444 2345556677888899999999887787764 45678889988742
Q ss_pred ---chH---HHHHHHHHHH-HhcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 299 ---DSK---LYAACLLKKL-EEHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 299 ---~~~---~~~~~~~~~l-~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+.+ .+..++.+.| .++||.+.|+. .+++|++++ .+++++++++++|.+.++++
T Consensus 338 ~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~--~~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 338 KTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIA--TSLETLEEACARIERAVAAL 401 (402)
T ss_pred cccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHhc
Confidence 011 1455677666 78999998874 357999996 57999999999999988765
No 81
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9e-32 Score=237.37 Aligned_cols=316 Identities=19% Similarity=0.192 Sum_probs=225.9
Q ss_pred ccccccCCCCC-ChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC-eEEcCCch-HHHHHHHHHhhhhcCCe
Q 018240 4 RTVDLRSDTVT-KPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA-GLFVPSGT-MGNLISVLVHCETRGSE 80 (359)
Q Consensus 4 ~~id~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~gt-~a~~~~l~~~~~~~g~~ 80 (359)
..+||.++.+. +|+|.+.+++.+.... ..|.+..+..++++.++++++.+. .+++++|+ +++..++.+++ ++||.
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~~~~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~ 107 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLDE-LALYPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALL-NPGTN 107 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHH-hhcCCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHh-CCCCE
Confidence 45889887554 4678899998775433 234455678999999999998754 35555554 55555555665 59999
Q ss_pred EEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHH
Q 018240 81 VILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTD 160 (359)
Q Consensus 81 vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~ 160 (359)
|++++|+|..... .+...|.+++.++.+ ++.+|++++++.++ +++++++++++ +||||.+++.+++.
T Consensus 108 v~~~~p~y~~~~~---~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~--------~~~~~v~i~~p-~NPtG~~~~~~~l~ 174 (359)
T PRK03158 108 TVMAEPTFSQYRH---NAIIEGAEVREVPLK-DGGHDLEAMLKAID--------EQTKIVWICNP-NNPTGTYVNHEELL 174 (359)
T ss_pred EEEcCCCHHHHHH---HHHHcCCeEEEEecC-CCCcCHHHHHHhcC--------CCCCEEEEeCC-CCCCCCCCCHHHHH
Confidence 9999999776433 366778899998876 67789999998887 67889988665 66999999988777
Q ss_pred HHHHHHHHcCcEEEEecccccchhhhcCchhHhhh-cCcc-EEEEeccccCCCcee--eEEecCHHHHHHHHHHHHhhCC
Q 018240 161 SVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV-QAAD-SASVCLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGG 236 (359)
Q Consensus 161 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~d-~~~~s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~ 236 (359)
++++.++ +|++||+||+|..........+..... .... +++.|+||.||.++- ||+++++++++.+......+
T Consensus 175 ~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~~-- 251 (359)
T PRK03158 175 SFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIARPPF-- 251 (359)
T ss_pred HHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHHHhcCCC--
Confidence 7777663 699999999974432211111111111 1222 444599999986543 89999999998887654432
Q ss_pred CcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhc
Q 018240 237 GMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEH 314 (359)
Q Consensus 237 ~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 314 (359)
..+.+.+.++...++ .+.++.++...++++.+.+.|++. ++.+. +..++++|+.++. +..++.+.|.++
T Consensus 252 --~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~--~~~g~~i~~~~~~----~~~~~~~~l~~~ 322 (359)
T PRK03158 252 --NTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY-GLFYY--PSQTNFIFVDTGR----DANELFEALLKK 322 (359)
T ss_pred --CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeC--CCcCcEEEEECCC----CHHHHHHHHHHC
Confidence 234455555555553 334445556677788888899888 77764 3467899988753 567899999889
Q ss_pred CceeccC----CCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 315 GVLVMPE----SSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 315 gi~~~~~----~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
||.+.++ .++++||+++ +.+++++++++|+++
T Consensus 323 gv~v~~g~~f~~~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 323 GYIVRSGAALGFPTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred CeEEeeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHh
Confidence 9999885 3568999984 789999999999875
No 82
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=3e-31 Score=237.27 Aligned_cols=329 Identities=19% Similarity=0.230 Sum_probs=239.3
Q ss_pred cccccccCCCCCCh--HHHHHHHHHcCCCCCC--------ccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSDTVTKP--TEAMRAAMASAEVDDD--------VLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~~~~~--~~~~~~a~~~~~~~~~--------~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~ 72 (359)
.+.++|.|+++.+. +|++++++.+...... .++..+...++++.+++++|.+.+++++||++|+..++..
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~SG~~An~~ai~~ 124 (406)
T PRK13393 45 REVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEAALLFTSGYVSNWAALST 124 (406)
T ss_pred ccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHH
Confidence 35689999988766 4889988887543211 1334567799999999999998899999999999999997
Q ss_pred hhhh-cCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018240 73 HCET-RGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 73 ~~~~-~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
+... +++.|+.+...|.+... + ....|.+++.++.+ |++.+++.++.... +++++|+++++.+ ++|
T Consensus 125 l~~~~~g~~I~~~~~~H~s~~~-~--~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~----~~~~~v~~~~v~~-~~G 191 (406)
T PRK13393 125 LGSRLPGCVILSDELNHASMIE-G--IRHSRAEKRIFRHN-----DPADLERKLSDLDP----HRPKLVAFESVYS-MDG 191 (406)
T ss_pred hhcCCCCCEEEEccchhHHHHH-H--HHHcCCeEEEeCCC-----CHHHHHHHHHhccC----CCCEEEEEcCCCC-CCC
Confidence 6532 67778888889888775 2 45567676666654 78888887763210 3578888877665 899
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHh---hhcCccEEEEeccccCCCceeeEEecCHHHHHHHH
Q 018240 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRR---LVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKAR 228 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~---~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~ 228 (359)
.+.| +++|.++|+++|+++|+|++|+.|.++..|..... +....|++..|++|.+|. .|||+++++++.+.++
T Consensus 192 ~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~-~GG~~~~~~~~~~~l~ 267 (406)
T PRK13393 192 DIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGV-MGGYITGSAALCDFIR 267 (406)
T ss_pred chhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcc-cCceeeCCHHHHHHHH
Confidence 9988 89999999999999999999986665444432221 222346777799999996 5688889999888876
Q ss_pred HHHHhhCCCcchhHHHHHHHHHHHHHhHH--HHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHH
Q 018240 229 RLRKTLGGGMRQVGVLCAAALVALQENVL--VMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAAC 306 (359)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (359)
.....+..+...++..++++..+++...+ ..+.+..++.+++.+.|+++ ++++. +..++++.+.+.. ..+..+
T Consensus 268 ~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~i~~v~~~~--~~~~~~ 342 (406)
T PRK13393 268 SFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA-GIPHL--PNPSHIVPVMVGD--PVLCKQ 342 (406)
T ss_pred HhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-CCCcC--CCCCCeEEEEeCC--HHHHHH
Confidence 55443323333445555566666643321 23455677889999999987 77654 3467777766543 135678
Q ss_pred HHHHHHh-cCceecc-------CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 307 LLKKLEE-HGVLVMP-------ESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 307 ~~~~l~~-~gi~~~~-------~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+.+.|.+ +||.+.+ .+...+|++++..++++|+++++++|+++++++
T Consensus 343 l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 343 ISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred HHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 9999965 6999843 244689999999999999999999999988765
No 83
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=6.3e-31 Score=237.43 Aligned_cols=337 Identities=13% Similarity=0.092 Sum_probs=228.4
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCC-------------CCCccCCChHHHHHHHHHHHHhCC--------C-CeEEcCC
Q 018240 4 RTVDLRSDTVTKPTEAMRAAMASAEV-------------DDDVLMHDPTAFRLETEMAKVMGK--------E-AGLFVPS 61 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~-------------~~~~~~~~~~~~~l~~~la~~~~~--------~-~~~~~~~ 61 (359)
.+|+|...-+..+.+.+.+.+..... ....|+...+..+|+++++++++. + ..+++++
T Consensus 39 g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~ 118 (468)
T PLN02450 39 GIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTA 118 (468)
T ss_pred eeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEcc
Confidence 46777777766666666666655311 112366667888999999999852 2 1266666
Q ss_pred chH-HHHHHHHHhhhhcCCeEEecCCCcceeeccccccc-cCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCce
Q 018240 62 GTM-GNLISVLVHCETRGSEVILGDNSHIHIYENGGIST-IGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTT 137 (359)
Q Consensus 62 gt~-a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~ 137 (359)
|++ ++..++.+++ .+||.|++++|+|..... .+. ..|++++.++.+ +++.+|++.+++.+++.... ..++
T Consensus 119 Ga~~al~~l~~~l~-~pGd~Vlv~~P~Y~~~~~---~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~--~~~~ 192 (468)
T PLN02450 119 GATSANETLMFCLA-EPGDAFLLPTPYYPGFDR---DLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKL--NLKV 192 (468)
T ss_pred ChHHHHHHHHHHhC-CCCCEEEECCCCCCchHH---HHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhc--CCCe
Confidence 655 5555555555 699999999999766443 244 578899988764 45677889999888631000 1378
Q ss_pred eEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhc---------CccEEEE-ecc
Q 018240 138 RLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQ---------AADSASV-CLS 206 (359)
Q Consensus 138 ~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~---------~~d~~~~-s~~ 206 (359)
++|++++ ++||||.+++.+++++|+++|++||++||+||+|....+.. ...+...... ...++++ |+|
T Consensus 193 k~v~l~n-P~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~S 271 (468)
T PLN02450 193 KGVLITN-PSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLS 271 (468)
T ss_pred eEEEEec-CCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEecc
Confidence 8999865 56799999999999999999999999999999975322211 1112222210 1224444 999
Q ss_pred ccCCCcee--eEEecCH-HHHHHHHHHHHhhCCCcchhHHHHHHHHHHHH------HhHHHHhhhHHHHHHHHHHHHhcC
Q 018240 207 KGLGAPVG--SVIVGSK-EFIKKARRLRKTLGGGMRQVGVLCAAALVALQ------ENVLVMLDGDHKKAKLLAEGLNQL 277 (359)
Q Consensus 207 K~~g~~~g--g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~~~~~~~~~~~l~~~l~~~ 277 (359)
|.||.|+- ||+++++ .+.+.+...... + .. +.+.+.++...++ .++++.++++.++++.+.+.|+++
T Consensus 272 K~~~l~GlRiG~li~~~~~l~~~~~~~~~~-~-~~--s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~ 347 (468)
T PLN02450 272 KDLGLPGFRVGAIYSNDEMVVSAATKMSSF-G-LV--SSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA 347 (468)
T ss_pred ccCCCCCccEEEEEECCHHHHHHHHHHhhc-C-CC--CHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99986543 8888864 455555444322 1 12 3344444444442 234556777888999999999998
Q ss_pred CCceEecCCccceEEEEEeccc----hHHHHHHHHHHH-HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHH
Q 018240 278 KGLRVDVDAVETNIVYFEITED----SKLYAACLLKKL-EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCF 346 (359)
Q Consensus 278 ~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l-~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l 346 (359)
|+.+. ++..+.|+|++++.. ......++.+.| .++||.+.|+. .+++|++++ ..+++++++.+++|
T Consensus 348 -gi~~~-~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~-~~~~~~l~~~l~ri 424 (468)
T PLN02450 348 -GIKCL-KSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFA-NMSEETLDLAMKRL 424 (468)
T ss_pred -CCccc-CCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEec-CCCHHHHHHHHHHH
Confidence 88764 455777999998631 001224566666 67899998873 468999996 36789999999999
Q ss_pred HHHHHHHH
Q 018240 347 QKIYAGVC 354 (359)
Q Consensus 347 ~~~~~~~~ 354 (359)
++++++..
T Consensus 425 ~~~l~~~~ 432 (468)
T PLN02450 425 KSFVESDS 432 (468)
T ss_pred HHHHHhcc
Confidence 99987655
No 84
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1.2e-30 Score=233.28 Aligned_cols=331 Identities=15% Similarity=0.121 Sum_probs=223.7
Q ss_pred ccccccCCCCC----ChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhC------CCC-eEEcCCch-HHHHHHHH
Q 018240 4 RTVDLRSDTVT----KPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMG------KEA-GLFVPSGT-MGNLISVL 71 (359)
Q Consensus 4 ~~id~~~~~~~----~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~~~-~~~~~~gt-~a~~~~l~ 71 (359)
..++|..+++. .+.+.+.+++.+.......|+...+..++++.++++++ .+. .+++++|+ +++..++.
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~ 113 (404)
T PRK09265 34 KILKLNIGNPAPFGFEAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQ 113 (404)
T ss_pred CeEEecCCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHH
Confidence 56889886652 24477777776644334457777778899999999983 332 35555555 45566666
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC
Q 018240 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC 149 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p 149 (359)
+++ ++||+|++++|+|..... .+...|.+++.++.+ .++.+|++++++.++ +++++|+++++ +||
T Consensus 114 ~~~-~~gd~Vlv~~p~y~~~~~---~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~--------~~~~~v~l~~P-~NP 180 (404)
T PRK09265 114 ALL-NNGDEVLVPAPDYPLWTA---AVSLSGGKPVHYLCDEEAGWFPDLDDIRSKIT--------PRTKAIVIINP-NNP 180 (404)
T ss_pred HhC-CCCCEEEEeCCCCcChHH---HHHHcCCEEEEEecccccCCCCCHHHHHHhcc--------ccceEEEEECC-CCC
Confidence 666 699999999999876443 356678788877544 346789999999887 67889888765 669
Q ss_pred CceecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhcCccEEEE-eccccCCCcee--eEEec--CHHH
Q 018240 150 GGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQAADSASV-CLSKGLGAPVG--SVIVG--SKEF 223 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~~~d~~~~-s~~K~~g~~~g--g~~~~--~~~~ 223 (359)
||.+++.+++++|.++|+++|++||+||+|....+.. ...+...+.....++++ |+||.+|.|+. ||++. ++++
T Consensus 181 tG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~ 260 (404)
T PRK09265 181 TGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKH 260 (404)
T ss_pred CCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHH
Confidence 9999999999999999999999999999964322211 11223333222335555 99999976543 77774 4443
Q ss_pred ----HHHHHHHHHhhCCCcchhHHHHHHHHHHHHH--hHHH---HhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEE
Q 018240 224 ----IKKARRLRKTLGGGMRQVGVLCAAALVALQE--NVLV---MLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYF 294 (359)
Q Consensus 224 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~---~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~ 294 (359)
++.+... .....+. +...+.++..++.. ..++ ..+++.++++.+.+.|++++++++. ++..++++|+
T Consensus 261 ~~~~~~~~~~~-~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~-~p~~g~~l~~ 336 (404)
T PRK09265 261 AKGYIEGLDML-ASMRLCA--NVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCV-KPKGALYAFP 336 (404)
T ss_pred HHHHHHHHHHH-hccccCC--CcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc-CCCcceEEEE
Confidence 3333222 1112222 33334444444421 1111 1235666788889999888787764 4567899999
Q ss_pred Eeccch---HHHHHHHHHHHHhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 295 EITEDS---KLYAACLLKKLEEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 295 ~~~~~~---~~~~~~~~~~l~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+++... ..+.+.+.+.|.++||.+.|+. .+++|+++ ..+++++++++++|.++++++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~--~~~~e~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 337 KLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVT--LPRVDDLEEAIGRIGRFLSGY 402 (404)
T ss_pred EecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEe--CCCHHHHHHHHHHHHHHHHHh
Confidence 887420 0134456677799999997752 46899999 478999999999999988765
No 85
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-31 Score=234.95 Aligned_cols=322 Identities=17% Similarity=0.140 Sum_probs=231.6
Q ss_pred cccccCCCCC-ChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC-eEEcCCchHHHHHHHHHhhhhcCCeEE
Q 018240 5 TVDLRSDTVT-KPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA-GLFVPSGTMGNLISVLVHCETRGSEVI 82 (359)
Q Consensus 5 ~id~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~gt~a~~~~l~~~~~~~g~~vl 82 (359)
+++|..+.+. .+++.+.+++.+.......|+.. ...++++.++++++.+. .+++++|++.++..+..++.++||.|+
T Consensus 34 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~-~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~vl 112 (369)
T PRK08153 34 RARIGANESGFGPSPSVIAAMREAAAEIWKYGDP-ENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVV 112 (369)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCC-ccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEE
Confidence 3688877555 45588888887754322345543 47899999999998753 577777777666555554436999999
Q ss_pred ecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHH
Q 018240 83 LGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSV 162 (359)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i 162 (359)
+++|+|..... .+...|.+++.++.+.+ .+|++++.+.+.+ .++++++++ .++||||.+++.+++.++
T Consensus 113 v~~p~y~~~~~---~~~~~g~~~~~vp~~~~-~~~~~~l~~~~~~-------~~~~~i~l~-~P~NPtG~~~~~~~l~~l 180 (369)
T PRK08153 113 TSLGAYPTFNY---HVAGFGGRLVTVPYRDD-REDLDALLDAARR-------ENAPLVYLA-NPDNPMGSWHPAADIVAF 180 (369)
T ss_pred ECCCcchHHHH---HHHHcCCeEEEeeCCCC-CCCHHHHHHHhcc-------cCCcEEEEe-CCCCCCCCCCCHHHHHHH
Confidence 99999766443 25667888888887555 4789988877753 578888885 467799999999999999
Q ss_pred HHHHHHcCcEEEEecccccchhhhcCchhHhhhc-CccEEEE-eccccCCCcee--eEEecCHHHHHHHHHHHHhhCCCc
Q 018240 163 GEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQ-AADSASV-CLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGGGM 238 (359)
Q Consensus 163 ~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~d~~~~-s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~~~ 238 (359)
+++|+ ++++||+||+|.. +...+ ....+.. ..+++++ |+||.+|.|+. ||+++++++++.+......+
T Consensus 181 ~~~~~-~~~~lI~DE~y~~--~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~~~---- 252 (369)
T PRK08153 181 IEALP-ETTLLVLDEAYCE--TAPAG-AAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRNHF---- 252 (369)
T ss_pred HHhCC-CCcEEEEeCchhh--hcCcc-cchhhhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhcCC----
Confidence 99887 4999999999643 22222 1222221 2344544 99999986543 89999999998887655432
Q ss_pred chhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCc
Q 018240 239 RQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGV 316 (359)
Q Consensus 239 ~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi 316 (359)
..+...+.++...++ .+.++.++...++++++.+.|++. |+... +..++++|+.++. ....+.++.++|.++||
T Consensus 253 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~--p~~~~f~~~~~~~-~~~~a~~l~~~l~~~Gi 328 (369)
T PRK08153 253 GMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN-GLTPL--PSATNFVAIDCGR-DGAFARAVLDGLIARDI 328 (369)
T ss_pred CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC--CCcCcEEEEECCC-CcccHHHHHHHHHHCCe
Confidence 234555666666663 344445666778888899999887 77643 4578899988753 12357789999989999
Q ss_pred eec-cC---CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 317 LVM-PE---SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 317 ~~~-~~---~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
.+. |+ +..++|+++. ++++++.++++|+++++..+
T Consensus 329 ~v~~p~~~~~~~~iRis~~---~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 329 FVRMPGVAPLDRCIRVSCG---PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred EEeeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHHHhh
Confidence 994 43 2468999984 78999999999999987654
No 86
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=100.00 E-value=1.4e-30 Score=229.66 Aligned_cols=335 Identities=19% Similarity=0.228 Sum_probs=245.7
Q ss_pred cccccCCCCCCh-HHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEe
Q 018240 5 TVDLRSDTVTKP-TEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVIL 83 (359)
Q Consensus 5 ~id~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~ 83 (359)
+|||.+|+-+.+ ++++.++|.. ++..|+.+++..+||+.+++++|.++++.+++|++|+..++.+++ ++||.| +
T Consensus 22 ~iDlltds~t~ams~~~~~a~~~---gd~~Y~~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~al~-~pGD~V-~ 96 (431)
T cd00617 22 YIDLLTDSGTGAMSDYQWAAMML---GDEAYAGSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSILL-KPGRTV-P 96 (431)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHh---CCCccCCCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHhC-CCCCEE-c
Confidence 579999887765 4888888875 455699999999999999999999999999999999999999887 599977 5
Q ss_pred cCCCcceeeccccccccCCccceeeecCC----------CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC-ce
Q 018240 84 GDNSHIHIYENGGISTIGGVHPRTVKNNQ----------DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG-GR 152 (359)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----------~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt-G~ 152 (359)
+++. +..+. ......|++++.++.+. .|.+|+++|++.+++. +..++++|+++ .++||+ |.
T Consensus 97 ~~~~-f~~~~--~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~----~~~~~~~I~v~-~p~N~~gG~ 168 (431)
T cd00617 97 SNMH-FDTTR--GHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEV----GAENIPYIVLT-ITNNTAGGQ 168 (431)
T ss_pred cCCc-ccchH--HHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcc----cCCCccEEEEE-CCcCCCCCc
Confidence 6655 44454 34778898999986642 3559999999999831 01247888884 566687 99
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccchhh--------hcCchhHhh----hcCccEEEEeccccCCCceeeEEecC
Q 018240 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAV--------ALGVPVRRL----VQAADSASVCLSKGLGAPVGSVIVGS 220 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~--------~~~~~~~~~----~~~~d~~~~s~~K~~g~~~gg~~~~~ 220 (359)
+++.+++++|.++|++||++||.|+++.++... +.+.+..++ ....|.+++|++|.++.+.||+++++
T Consensus 169 ~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~ 248 (431)
T cd00617 169 PVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIGGFLALR 248 (431)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccceEEEeC
Confidence 999999999999999999999999998654221 233444432 24789999999999998999999887
Q ss_pred H-HHHHHHHHHHHhh-CCCc--chhHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEE
Q 018240 221 K-EFIKKARRLRKTL-GGGM--RQVGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFE 295 (359)
Q Consensus 221 ~-~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~ 295 (359)
+ ++.++++...... +... ..++...++...++++.. .+.+++..+++++|.+.|++. |+.+.. |.++.++|+.
T Consensus 249 d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~~~~~~r~~l~~~L~~~-G~~v~~-P~Ggh~v~~d 326 (431)
T cd00617 249 DDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRVEQVRYLGDRLDEA-GVPIVE-PAGGHAVFID 326 (431)
T ss_pred cHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCCccC-CCcceEEEEE
Confidence 5 6888876543211 1100 012223333333554421 124555566779999999999 998854 5688899998
Q ss_pred eccc------hHHHHHHHHHHH-HhcCceeccC-----------------CCcEEEEEeC-CCCCHHHHHHHHHHHHHHH
Q 018240 296 ITED------SKLYAACLLKKL-EEHGVLVMPE-----------------SSTRVRIVVH-HQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 296 ~~~~------~~~~~~~~~~~l-~~~gi~~~~~-----------------~~~~lRi~~~-~~~~~~~i~~~~~~l~~~~ 350 (359)
.+.- ...++.+|+.+| .+.||.++.- ....+|+.++ ...|.++++.++++|..++
T Consensus 327 ~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~ 406 (431)
T cd00617 327 AREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALY 406 (431)
T ss_pred hHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHH
Confidence 7631 113577888777 8899986321 1256999864 3679999999999999998
Q ss_pred HHHH
Q 018240 351 AGVC 354 (359)
Q Consensus 351 ~~~~ 354 (359)
++-.
T Consensus 407 ~~~~ 410 (431)
T cd00617 407 ERRE 410 (431)
T ss_pred hhHh
Confidence 8754
No 87
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-31 Score=233.40 Aligned_cols=322 Identities=18% Similarity=0.216 Sum_probs=226.3
Q ss_pred ccccccCCCCCC-hHHHHHHHHHcCCCCC---CccCCChHHHHHHHHHHHHhCCC---------CeEEcCCchH-HHHHH
Q 018240 4 RTVDLRSDTVTK-PTEAMRAAMASAEVDD---DVLMHDPTAFRLETEMAKVMGKE---------AGLFVPSGTM-GNLIS 69 (359)
Q Consensus 4 ~~id~~~~~~~~-~~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~~~---------~~~~~~~gt~-a~~~~ 69 (359)
+.++|.++.+.. |+|.+.+++.+..... ..|. .++..+++++++++++.. ..+++++|++ ++..+
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~ 107 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSL 107 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHH
Confidence 357788876664 4588888887643321 3453 467899999999999732 1266666665 44455
Q ss_pred HHHhhhhcCC-eEEecCCCcceeeccccccccCCccceeeecCC-CCCCCHHHHHHHhcCCCCCccCCceeEEEEecccc
Q 018240 70 VLVHCETRGS-EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ-DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHA 147 (359)
Q Consensus 70 l~~~~~~~g~-~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~ 147 (359)
+.+++. +|+ .|++++|+|.. +. ..++..|++++.++.+. ++.+|+++|++.+++.. .+++++|++++ +|
T Consensus 108 ~~~~~~-~g~~~Vlv~~P~y~~-~~--~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~----~~~~k~i~l~~-P~ 178 (374)
T PRK02610 108 LIATCL-GGEGSILVAEPTFSM-YG--ILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQ----NPPVRVVFVVH-PN 178 (374)
T ss_pred HHHHcC-CCCCeEEEcCCChHH-HH--HHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhc----CCCceEEEEeC-CC
Confidence 666553 665 89999999765 44 34788899999997654 47899999999887310 03788999965 57
Q ss_pred CCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEE-EeccccCCCcee--eEEecCHHHH
Q 018240 148 NCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSAS-VCLSKGLGAPVG--SVIVGSKEFI 224 (359)
Q Consensus 148 ~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~-~s~~K~~g~~~g--g~~~~~~~~~ 224 (359)
||||.+++.++++++.+++ ++++||+||+|.... . ......+.....+++ .|+||.||.|+. ||++++++++
T Consensus 179 NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~--~-~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~ 253 (374)
T PRK02610 179 SPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFS--Q-TTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHPELI 253 (374)
T ss_pred CCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccC--c-cchHHHHhcCCCEEEEEecchhccCcccceeeeecCHHHH
Confidence 7999999999999998876 499999999964321 1 112222322233444 499999987654 9999999999
Q ss_pred HHHHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchH
Q 018240 225 KKARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSK 301 (359)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 301 (359)
+.+......+ +. +.+.+.++..+++ .+.+ .+++..+.++.+.+.|++++++.+. +..++++|++++..
T Consensus 254 ~~l~~~~~~~--~~--~~~~q~a~~~~l~~~~~~~~-~~~~~~~~r~~l~~~L~~~~~~~~~--p~~g~f~~~~l~~~-- 324 (374)
T PRK02610 254 AVLEKVRLPY--NL--PSFSQLAAQLALEHRQELLA-AIPEILQERDRLYQALQELPQLRVW--PSAANFLYLRLSQD-- 324 (374)
T ss_pred HHHHHhcCCC--CC--CHHHHHHHHHHhcCHHHHHH-HHHHHHHHHHHHHHHHHhCCCcEeC--CCcceEEEEeCCCC--
Confidence 9887665322 22 3344444444553 3333 3334444567788888888777653 56889999998752
Q ss_pred HHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 302 LYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 302 ~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.+..++.+.|.++||.+.+. .+++||++. +.+++++++++|+++++++
T Consensus 325 ~~~~~~~~~l~~~gi~v~~~-~~~lRls~~---~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 325 AALAALHQALKAQGTLVRHT-GGGLRITIG---TPEENQRTLERLQAALTQL 372 (374)
T ss_pred CCHHHHHHHHHHCCEEEEeC-CCeEEEeCC---CHHHHHHHHHHHHHHHhhc
Confidence 46788999999999998764 468999984 3577899999999888764
No 88
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=5.3e-31 Score=232.52 Aligned_cols=316 Identities=19% Similarity=0.181 Sum_probs=226.2
Q ss_pred CChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC---eEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcce
Q 018240 14 TKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA---GLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIH 90 (359)
Q Consensus 14 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~---~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~ 90 (359)
..+++++.+++.+...........+...++++.+++++|.+. .++++||++++..++.++. ++|+.|+++.++|++
T Consensus 8 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~-~~g~~vl~~~~~~~~ 86 (356)
T cd06451 8 SNVPPRVLKAMNRPMLGHRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLL-EPGDKVLVGVNGVFG 86 (356)
T ss_pred cCCCHHHHHHhCCCccCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhC-CCCCEEEEecCCchh
Confidence 344588999997754332211123446799999999999843 3577788999999998887 589999999988876
Q ss_pred e-eccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc
Q 018240 91 I-YENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH 169 (359)
Q Consensus 91 ~-~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~ 169 (359)
. +. ..++..|++++.++.+.++.+|++++++.+++ .++++|+++++ +||+|.+.| +++|.++|+++
T Consensus 87 ~~~~--~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~-------~~~~~v~i~~~-~~~~G~~~~---~~~i~~~a~~~ 153 (356)
T cd06451 87 DRWA--DMAERYGADVDVVEKPWGEAVSPEEIAEALEQ-------HDIKAVTLTHN-ETSTGVLNP---LEGIGALAKKH 153 (356)
T ss_pred HHHH--HHHHHhCCCeEEeecCCCCCCCHHHHHHHHhc-------cCCCEEEEecc-CCCcccccC---HHHHHHHHHhc
Confidence 3 33 34677899999998777788999999999983 37889998665 569999988 78899999999
Q ss_pred CcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHH----H---------HHhhC
Q 018240 170 GLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARR----L---------RKTLG 235 (359)
Q Consensus 170 ~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~----~---------~~~~~ 235 (359)
|+++++|++|++|... .+... .++|+++.|+||++++|.| |+++.++++++.+.. . ....+
T Consensus 154 ~~~li~D~~~~~g~~~---~~~~~--~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (356)
T cd06451 154 DALLIVDAVSSLGGEP---FRMDE--WGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWG 228 (356)
T ss_pred CCEEEEeeehhccCcc---ccccc--cCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhc
Confidence 9999999998765432 12222 2678888899999998877 899999888877643 0 00000
Q ss_pred ---CC-cchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCc--cceEEEEEeccchHHHHH
Q 018240 236 ---GG-MRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV--ETNIVYFEITEDSKLYAA 305 (359)
Q Consensus 236 ---~~-~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~ 305 (359)
.. ...+.....+...+++ ...+...++..++++++.+.|++. |+++..++. ...+.++.++. +.+..
T Consensus 229 ~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~--~~~~~ 305 (356)
T cd06451 229 EGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTVTAVLVPE--GVDGD 305 (356)
T ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCceEEEECCC--CCCHH
Confidence 01 0111221222223332 223345667778899999999988 888753321 22334566553 24678
Q ss_pred HHHHHHHhc-CceeccC----CCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 306 CLLKKLEEH-GVLVMPE----SSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 306 ~~~~~l~~~-gi~~~~~----~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
++.++|.++ ||.+.++ .+.++|++++..++++++++++++|+++++
T Consensus 306 ~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 306 EVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred HHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 999999877 9998764 245899999989999999999999998764
No 89
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.8e-31 Score=234.73 Aligned_cols=318 Identities=20% Similarity=0.191 Sum_probs=225.4
Q ss_pred ccccccCCCC-CChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC-eEEcCCchH-HHHHHHHHhhhhcCCe
Q 018240 4 RTVDLRSDTV-TKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA-GLFVPSGTM-GNLISVLVHCETRGSE 80 (359)
Q Consensus 4 ~~id~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~gt~-a~~~~l~~~~~~~g~~ 80 (359)
.+|||..+.+ ..|.+.+.+++.+.......|+...+ .++++.++++++.+. .+++++|++ ++..++.+++ ++||.
T Consensus 37 ~~i~l~~~~~~~~~~~~~~~al~~~~~~~~~Y~~~~g-~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~ 114 (371)
T PRK05166 37 RIAKLGSNENPLGPSPAVRRAFADIAELLRLYPDPQG-RALREAIAARTGVPADRIILGNGSEDLIAVICRAVL-RPGDR 114 (371)
T ss_pred ceEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcH-HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhc-CCCCE
Confidence 4688998744 45668888888764323334665555 489999999998764 366666655 5555555555 69999
Q ss_pred EEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHH
Q 018240 81 VILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTD 160 (359)
Q Consensus 81 vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~ 160 (359)
|+++.|+|.... ..++..|.+++.++.+.++.+|++++++.++ +++++|++ +.++||||.+++.++++
T Consensus 115 vli~~P~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~--------~~~~~v~l-~~p~NPtG~~~~~~~~~ 182 (371)
T PRK05166 115 VVTLYPSFPLHE---DYPTMMGARVERVTVTPDLGFDLDALCAAVA--------RAPRMLMF-SNPSNPVGSWLTADQLA 182 (371)
T ss_pred EEEcCCChHHHH---HHHHHcCCeEEEeecCCCCCCCHHHHHHhhh--------cCCCEEEE-eCCCCCCCCCCCHHHHH
Confidence 999999976643 3367889999999887778899999999988 67788888 45566999999999999
Q ss_pred HHHHHHHHcCcEEEEecccccchhhhcCchhHhhh-c-CccEEE-EeccccCCCcee--eEEe-cCHHHHHHHHHHHHhh
Q 018240 161 SVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV-Q-AADSAS-VCLSKGLGAPVG--SVIV-GSKEFIKKARRLRKTL 234 (359)
Q Consensus 161 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~-~~d~~~-~s~~K~~g~~~g--g~~~-~~~~~~~~~~~~~~~~ 234 (359)
+|+++|++ +++||+||+|..........+..... . ...+++ .|+||.||.|+- ||++ .++++.+.+......+
T Consensus 183 ~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~~~ 261 (371)
T PRK05166 183 RVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRTPF 261 (371)
T ss_pred HHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhccCC
Confidence 99998864 88999999964433111111222221 1 223444 499999986543 8865 4788888876554322
Q ss_pred CCCcchhHHHHHHHHHHH--HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHH
Q 018240 235 GGGMRQVGVLCAAALVAL--QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLE 312 (359)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (359)
+ .+...+.++...+ ..+.++.++.+.++++.+.+.|++. |+.+. +..++++|+.++. +..++.+.|.
T Consensus 262 ~----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--p~~g~fl~~~~~~----~~~~l~~~l~ 330 (371)
T PRK05166 262 N----VNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM-GYRIA--PSRANFLFFDARR----PASAVAEALL 330 (371)
T ss_pred C----CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-cCeeC--CCcCCEEEEeCCC----CHHHHHHHHH
Confidence 2 2334444444444 2345545667778889999999998 87753 4578899998764 4678999998
Q ss_pred hcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 313 EHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 313 ~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
++||.+.|+. ..++||+++ +.++.+++++.|++++
T Consensus 331 ~~gi~v~p~~~~~~~~~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 331 RQGVIVKPWKQPGFETFIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred HCCeEEecCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 8999997753 467999994 5777888888887764
No 90
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.1e-31 Score=233.22 Aligned_cols=326 Identities=17% Similarity=0.193 Sum_probs=231.6
Q ss_pred ccccccCCCCCC-hHHHHHHHHHcCCC----CCCccCCChHHHHHHHHHHHHhCC-------C-CeEEcCCchHHHHHHH
Q 018240 4 RTVDLRSDTVTK-PTEAMRAAMASAEV----DDDVLMHDPTAFRLETEMAKVMGK-------E-AGLFVPSGTMGNLISV 70 (359)
Q Consensus 4 ~~id~~~~~~~~-~~~~~~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~~~-------~-~~~~~~~gt~a~~~~l 70 (359)
..+||+.+++.. |.+.+.+++.+... ....|+...+...+++.++++++. + ..++++|+++++..++
T Consensus 34 ~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~ 113 (394)
T PRK06836 34 NVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVAL 113 (394)
T ss_pred CeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHH
Confidence 458998887654 34777777765322 134466677889999999998852 1 2355666667777778
Q ss_pred HHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCC-CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC
Q 018240 71 LVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQD-GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC 149 (359)
Q Consensus 71 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p 149 (359)
..++ .+|+.|++++|+|.... ..++..|++++.++.+++ +.+|++++++.++ +++++|++++ ++||
T Consensus 114 ~~l~-~~gd~Vli~~p~~~~~~---~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~--------~~~~~v~~~~-p~NP 180 (394)
T PRK06836 114 KAIL-NPGDEVIVFAPYFVEYR---FYVDNHGGKLVVVPTDTDTFQPDLDALEAAIT--------PKTKAVIINS-PNNP 180 (394)
T ss_pred HHhc-CCCCEEEEcCCCCccHH---HHHHHcCCEEEEEecCCccCcCCHHHHHhhcC--------cCceEEEEeC-CCCC
Confidence 7777 59999999999976643 346778999999977655 7899999999998 6889999865 5779
Q ss_pred CceecChhhHHHHHHHHHH------cCcEEEEecccccchhhhcCchhHhhhc-CccEE-EEeccccCCCce-e-eEEec
Q 018240 150 GGRCLSVEYTDSVGEIAKK------HGLKLHIDGARIFNAAVALGVPVRRLVQ-AADSA-SVCLSKGLGAPV-G-SVIVG 219 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~------~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~d~~-~~s~~K~~g~~~-g-g~~~~ 219 (359)
||.++|.+++++|+++|++ ||++||+|++|....+ .+.....+.. ...++ ..|+||.||.|+ + ||+++
T Consensus 181 tG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~ 258 (394)
T PRK06836 181 TGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVY--DGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAV 258 (394)
T ss_pred CCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccc--CCCCCCChHHccCcEEEEecchhhccCcceeeEEEec
Confidence 9999999999999999999 8999999999754322 2212111111 12344 459999998654 3 88888
Q ss_pred CHHHHHHH---HHH---HHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEE
Q 018240 220 SKEFIKKA---RRL---RKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVY 293 (359)
Q Consensus 220 ~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~ 293 (359)
++++.+.. ... ....+. ...+...+.+....++... ....+.++++.+.+.|++. |+.+. ++.++.++|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~q~~~~~~l~~~~--~~~~~~~~r~~l~~~L~~~-g~~~~-~~~gg~~~~ 333 (394)
T PRK06836 259 NPEMEDADDLVAALVFANRILGF-VNAPALMQRVVAKCLDATV--DVSIYKRNRDLLYDGLTEL-GFECV-KPQGAFYLF 333 (394)
T ss_pred CHHHhhhHHHHHHHHHHhhcccc-ccCCHHHHHHHHHHhCChH--HHHHHHHHHHHHHHHHHhC-CCEee-cCCceEEEE
Confidence 87664321 111 111111 1223344444444443322 3455677888899999988 88764 345688899
Q ss_pred EEeccchHHHHHHHHHHHHhcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 294 FEITEDSKLYAACLLKKLEEHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 294 ~~~~~~~~~~~~~~~~~l~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+.++.. +..++.+.|.++||.+.|+. .+++||+++ .+++++++.+++|+++++++.
T Consensus 334 ~~~~~~---~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~~~i~~l~~~l~~~~ 393 (394)
T PRK06836 334 PKSPEE---DDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC--VDTETIERSLPAFEKLAKEYK 393 (394)
T ss_pred EeCCCC---CHHHHHHHHHhCCEEEECchhcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhc
Confidence 887652 66788888999999998874 468999996 689999999999999998764
No 91
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.9e-31 Score=233.03 Aligned_cols=314 Identities=18% Similarity=0.178 Sum_probs=222.6
Q ss_pred ccccccCCCCCC-hHHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHhCCCCe-EEcC-CchHHHHHHHHHhhhhcCC
Q 018240 4 RTVDLRSDTVTK-PTEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVMGKEAG-LFVP-SGTMGNLISVLVHCETRGS 79 (359)
Q Consensus 4 ~~id~~~~~~~~-~~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~~~~~-~~~~-~gt~a~~~~l~~~~~~~g~ 79 (359)
.+|||.++.+.. |++.+.+++.+.... ...|.. +...+++++++++++.+.. ++++ |+++++..++.+++ ++||
T Consensus 25 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~~-~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd 102 (353)
T PRK05387 25 KLIKLNTNENPYPPSPKVLEAIRAALGDDLRLYPD-PNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFF-NHDR 102 (353)
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHhhhhhhcCCC-CcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc-CCCC
Confidence 568999987665 458888888765432 334543 3568999999999987643 5554 55566667777776 5999
Q ss_pred eEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhH
Q 018240 80 EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYT 159 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l 159 (359)
+|++++|+|.. +. ..++..|++++.++.++++.+|++.+++ .++++++.+ +|||||.+++.+++
T Consensus 103 ~vlv~~P~y~~-~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~------------~~~~v~~~~-P~NPtG~~~~~~~~ 166 (353)
T PRK05387 103 PLLFPDITYSF-YP--VYAGLYGIPYEEIPLDDDFSIDVEDYLR------------PNGGIIFPN-PNAPTGIALPLAEI 166 (353)
T ss_pred EEEEeCCCHHH-HH--HHHHHcCCEEEEeecCCCCCCCHHHHHh------------cCCEEEEeC-CCCCCCCCCCHHHH
Confidence 99999999744 54 3477889999999887788899998763 234666644 57799999998888
Q ss_pred HHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhc--CccEEEEeccccCCCcee--eEEecCHHHHHHHHHHHHhhC
Q 018240 160 DSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQ--AADSASVCLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLG 235 (359)
Q Consensus 160 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~--~~d~~~~s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~ 235 (359)
.+|++.++ ++++|+||+|.. +. +.+...+.. ...+++.|+||.+|.|+- ||+++++++.+.++.......
T Consensus 167 ~~l~~~~~--~~~livDe~y~~--~~--~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~~~ 240 (353)
T PRK05387 167 ERILAANP--DSVVVIDEAYVD--FG--GESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNSFN 240 (353)
T ss_pred HHHHHhCC--CcEEEEeCcccc--cC--CcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhccCC
Confidence 87776543 999999999742 22 222222211 222455599999986542 889999999998876654332
Q ss_pred CCcchhHHHHHHHHHHH--HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHh
Q 018240 236 GGMRQVGVLCAAALVAL--QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEE 313 (359)
Q Consensus 236 ~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 313 (359)
. +..+...+.++...+ ..+.++.++++.++++.+.+.|+++ |+.+. +..++++|+.++. .+..++.+.|.+
T Consensus 241 ~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~---~~~~~~~~~l~~ 313 (353)
T PRK05387 241 S-YPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL-GFEVL--PSKANFVFARHPS---HDAAELAAKLRE 313 (353)
T ss_pred C-CCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC--CCcCcEEEEECCC---CCHHHHHHHHHH
Confidence 1 122334444444444 2344446677888899999999998 88763 4477888988764 367889999999
Q ss_pred cCceeccC----CCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 314 HGVLVMPE----SSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 314 ~gi~~~~~----~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
+||.+.+. ..+++|++++ +++++++++++|++++.
T Consensus 314 ~gi~v~~~~~~~~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 314 RGIIVRHFNKPRIDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred CCEEEEECCCCCCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 99998443 2468999984 67999999999998765
No 92
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.1e-31 Score=232.25 Aligned_cols=315 Identities=17% Similarity=0.142 Sum_probs=223.6
Q ss_pred ccccccCCC-CCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC-eEEcCCch-HHHHHHHHHhhhhcCCe
Q 018240 4 RTVDLRSDT-VTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA-GLFVPSGT-MGNLISVLVHCETRGSE 80 (359)
Q Consensus 4 ~~id~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~gt-~a~~~~l~~~~~~~g~~ 80 (359)
..|+|..+. +..|+|.+.+++.+.. ....|. .+...++++.++++++.+. .+++++|+ +++..++..++ ++|++
T Consensus 53 ~~i~l~~n~~p~~~~~~v~~a~~~~~-~~~~Yp-~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~-~~gd~ 129 (380)
T PLN03026 53 DIVKLDANENPYGPPPEVLEALGNMK-FPYVYP-DPESRRLRAALAEDSGLESENILVGCGADELIDLLMRCVL-DPGDK 129 (380)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHhhH-hhccCC-CCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHhc-CCCCE
Confidence 568999884 4456688888886531 223354 3457899999999999764 46666665 45555655665 69999
Q ss_pred EEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHH
Q 018240 81 VILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTD 160 (359)
Q Consensus 81 vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~ 160 (359)
|++++|+|. .+. ..++..|++++.++.+.++.+|++++++.++. +++++|++++ ++||||.+++.+++.
T Consensus 130 Vlv~~P~y~-~y~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~-------~~~~~v~l~~-P~NPTG~~~~~~~l~ 198 (380)
T PLN03026 130 IIDCPPTFG-MYV--FDAAVNGAEVIKVPRTPDFSLDVPRIVEAVET-------HKPKLLFLTS-PNNPDGSIISDDDLL 198 (380)
T ss_pred EEEcCCChH-HHH--HHHHHcCCEEEEeecCCCCCcCHHHHHHHHhc-------cCCcEEEEeC-CCCCCCCCCCHHHHH
Confidence 999999965 454 34677899999998777788999999999842 6889999965 567999999977777
Q ss_pred HHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccE-EEEeccccCCCcee--eEEecCHHHHHHHHHHHHhhCCC
Q 018240 161 SVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADS-ASVCLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGGG 237 (359)
Q Consensus 161 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~-~~~s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~~ 237 (359)
+|++.+ ++||+||+|.... ..+.....+.....+ ++.|+||.||.++. ||+++++++++.+......+.
T Consensus 199 ~l~~~~----~~vi~DeaY~~~~--~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~~~~~-- 270 (380)
T PLN03026 199 KILELP----ILVVLDEAYIEFS--TQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN-- 270 (380)
T ss_pred HHHhcC----CEEEEECcchhhc--CCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCHHHHHHHHHhcCCCC--
Confidence 766543 8999999974322 112111112112234 44599999986543 999999999988776554322
Q ss_pred cchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcC
Q 018240 238 MRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHG 315 (359)
Q Consensus 238 ~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 315 (359)
. +...+.++..+++ .+.++.++.+.++++++.+.|++++++.+ .+..++|+|+.++.. .+..++.+.|.++|
T Consensus 271 ~--~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~--~p~~~~f~~~~~~~~--~~~~~~~~~l~~~g 344 (380)
T PLN03026 271 V--SVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEP--YPSDANFILCRVTSG--RDAKKLKEDLAKMG 344 (380)
T ss_pred C--CHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeE--CCCCCeEEEEECCCC--CCHHHHHHHHHHCC
Confidence 2 3344444455553 44454666778888999999998844554 256889999998742 35678999999999
Q ss_pred ceeccC----CCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 316 VLVMPE----SSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 316 i~~~~~----~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
|.+.++ ..+++||++. +.+++++++++|+++
T Consensus 345 I~v~~~~~~~~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 345 VMVRHYNSKELKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred eEEEECCCCCCCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 998664 2468999994 678899999988754
No 93
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=8.5e-31 Score=234.00 Aligned_cols=324 Identities=21% Similarity=0.236 Sum_probs=230.4
Q ss_pred cccccccCCCC-CC-hHHHHHHHHHcCCCC----C----CccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSDTV-TK-PTEAMRAAMASAEVD----D----DVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~~-~~-~~~~~~~a~~~~~~~----~----~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~ 72 (359)
..+|||.++.+ .. ++|++++++.+.... . ..++..+...++++.++++++.+..+++++|++++..++..
T Consensus 39 ~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~~g~~~~~~~l~~ 118 (385)
T PRK05958 39 RRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGAERALLFSSGYAANLAVLTA 118 (385)
T ss_pred ceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHH
Confidence 46799998754 32 458888888764422 1 11234566789999999999987789999999999887777
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018240 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
++ ++||.|++++++|.+... + ....|.+++.++.. |++.+++.++... +.+.++++ ++.+|++|.
T Consensus 119 ~~-~~gd~V~~~~~~~~~~~~-~--~~~~g~~~~~~~~~-----d~~~l~~~i~~~~-----~~~~lvi~-~~~~~~~G~ 183 (385)
T PRK05958 119 LA-GKGDLIVSDKLNHASLID-G--ARLSRARVRRYPHN-----DVDALEALLAKWR-----AGRALIVT-ESVFSMDGD 183 (385)
T ss_pred hC-CCCCEEEEeCccCHHHHH-H--HHhcCCceEEeCCC-----CHHHHHHHHHhcc-----CCCeEEEE-EecccCCCC
Confidence 66 699999999999887664 2 56678888877643 8899999887310 13555655 445568998
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHh---hhcCcc-EEEEeccccCCCceeeEEecCHHHHHHHH
Q 018240 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRR---LVQAAD-SASVCLSKGLGAPVGSVIVGSKEFIKKAR 228 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~---~~~~~d-~~~~s~~K~~g~~~gg~~~~~~~~~~~~~ 228 (359)
..+ +++|+++|++||+++|+|++|..+.....+..... +....+ +++.|+||++|. .||+++.++++.+.+.
T Consensus 184 ~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~-~Gg~~~~~~~~~~~~~ 259 (385)
T PRK05958 184 LAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGS-SGAAVLGSETLIDYLI 259 (385)
T ss_pred cCC---HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhccc-CCcEEEcCHHHHHHHH
Confidence 765 89999999999999999999866544322222222 222334 555699999985 5678888988888765
Q ss_pred HHHHhhCCCcchhHHHHHHHHHHHHHhH--HHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHH
Q 018240 229 RLRKTLGGGMRQVGVLCAAALVALQENV--LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAAC 306 (359)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (359)
.....+..+...++...+++..+++... +...+++.++++++.+.|+++ ++++. +..++++++.++. ..+..+
T Consensus 260 ~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~--~~~~~~~~~~~~~--~~~~~~ 334 (385)
T PRK05958 260 NRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRAL-GFQLM--DSQSAIQPLIVGD--NERALA 334 (385)
T ss_pred HhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCcC--CCCCCEEEEEeCC--HHHHHH
Confidence 4332222222223444444555554222 336677888899999999988 77753 3467788888764 246778
Q ss_pred HHHHHHhcCceeccC-------CCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 307 LLKKLEEHGVLVMPE-------SSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 307 ~~~~l~~~gi~~~~~-------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
+.++|.++||.+.+. +..++|++++..++++++++++++|++++
T Consensus 335 ~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 335 LAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred HHHHHHHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 999999999999642 24689999988899999999999998753
No 94
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-31 Score=224.86 Aligned_cols=330 Identities=18% Similarity=0.236 Sum_probs=242.4
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCCCC-------ccCC--ChHHHHHHHHHHHHhCCCC--eEEcCCchHHHHHHHHHh
Q 018240 5 TVDLRSDTVTKPTEAMRAAMASAEVDDD-------VLMH--DPTAFRLETEMAKVMGKEA--GLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~~~-------~~~~--~~~~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l~~~ 73 (359)
+|+|.+.-.+++.|++.++|........ .||. ....++.|+.+++++|.+. .+||++||+++..++..+
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~ 81 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGA 81 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhh
Confidence 5778888888888999999877543321 1221 3456888999999999976 378889999999999984
Q ss_pred h--h---hcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccC
Q 018240 74 C--E---TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHAN 148 (359)
Q Consensus 74 ~--~---~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ 148 (359)
. . +.+.+|+++.-.|.++.+.....+..|.++.+++.+.+|.+|+++|+++|+ ++|.+|.+.+.+ |
T Consensus 82 ~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~--------~~T~LVSim~aN-n 152 (386)
T COG1104 82 ALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALR--------PDTILVSIMHAN-N 152 (386)
T ss_pred HHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcC--------CCceEEEEEecc-c
Confidence 2 1 247799999999999987332233469999999999999999999999999 789999996655 4
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHH
Q 018240 149 CGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKA 227 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~ 227 (359)
-+|++.| +++|.++|+++|+++++|.+|++|-.+ .....+ ++|++++|.||..| |-| |+++.++...-..
T Consensus 153 E~G~IQp---I~ei~~i~k~~~i~fHvDAvQa~Gkip---i~~~~~--~vD~ls~SaHK~~G-pkGiGaLyv~~~~~~~p 223 (386)
T COG1104 153 ETGTIQP---IAEIGEICKERGILFHVDAVQAVGKIP---IDLEEL--GVDLLSFSAHKFGG-PKGIGALYVRPGVRLEP 223 (386)
T ss_pred Ceeeccc---HHHHHHHHHHcCCeEEEehhhhcCcee---cccccc--CcceEEeehhhccC-CCceEEEEECCCCccCc
Confidence 8999988 899999999999999999999776553 233333 69999999999655 677 8888755432221
Q ss_pred H-----HHHHhhCCCcchhHHHHHH--HHHHHHHhHHHHhhhHHHHHHHHHHHHhcC-CCceEecC--CccceEEEEEec
Q 018240 228 R-----RLRKTLGGGMRQVGVLCAA--ALVALQENVLVMLDGDHKKAKLLAEGLNQL-KGLRVDVD--AVETNIVYFEIT 297 (359)
Q Consensus 228 ~-----~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~-~g~~~~~~--~~~~~~~~~~~~ 297 (359)
. +.+..-.++...+.+...+ +..+.++.. ....+....+++|.+.|.+. |++.+... +.-.+.+.+.++
T Consensus 224 ~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~-~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~ 302 (386)
T COG1104 224 LIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELE-EENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFP 302 (386)
T ss_pred eeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeC
Confidence 0 0000111222222222211 122223333 36667888899999999976 78777433 223455778887
Q ss_pred cchHHHHHHHHHHHHhcCceeccCC-----------------------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 298 EDSKLYAACLLKKLEEHGVLVMPES-----------------------STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 298 ~~~~~~~~~~~~~l~~~gi~~~~~~-----------------------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
. +.++.+.-.|..+||.+..++ ...|||+++..++++|++++++.+.+++++++
T Consensus 303 g---v~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr 379 (386)
T COG1104 303 G---VEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLR 379 (386)
T ss_pred C---CcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 6 588999999999999996652 23599999999999999999999999999987
Q ss_pred hh
Q 018240 355 EE 356 (359)
Q Consensus 355 ~~ 356 (359)
+.
T Consensus 380 ~~ 381 (386)
T COG1104 380 EL 381 (386)
T ss_pred hh
Confidence 63
No 95
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=1.2e-30 Score=232.73 Aligned_cols=332 Identities=20% Similarity=0.229 Sum_probs=233.3
Q ss_pred cccccccCCCCCChH-HHHHHHHHcCCC--CCCccCCChHHHHHHHHHHHHhC----C--C-C-eEEcCCch-HHHHHHH
Q 018240 3 TRTVDLRSDTVTKPT-EAMRAAMASAEV--DDDVLMHDPTAFRLETEMAKVMG----K--E-A-GLFVPSGT-MGNLISV 70 (359)
Q Consensus 3 ~~~id~~~~~~~~~~-~~~~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~~----~--~-~-~~~~~~gt-~a~~~~l 70 (359)
.+++||..+++..+. +.+.+++.+... ....|+...+..+++++++++++ . + . .+++++|+ +++..++
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~ 108 (395)
T PRK08175 29 EDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLM 108 (395)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHH
Confidence 457899988766443 445555554322 23457777788999999999863 2 1 2 36556665 5555666
Q ss_pred HHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018240 71 LVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 71 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
..++ ++|++|++++|+|..... .+...|.+++.++.+.++. +.+++++.+++.. +++++|++++ ++|||
T Consensus 109 ~~~~-~~gd~Vlv~~P~y~~~~~---~~~~~g~~~~~v~~~~~~~-~~~~l~~~l~~~~-----~~~~~v~i~~-p~NPt 177 (395)
T PRK08175 109 LATL-DHGDTVLVPNPSYPIHIY---GAVIAGAQVRSVPLVEGVD-FFNELERAIRESY-----PKPKMMILGF-PSNPT 177 (395)
T ss_pred HHhC-CCCCEEEEcCCCCcchHH---HHHHcCCeEEEEecccCCC-cHHHHHHHHhhcc-----CCceEEEEeC-CCCCC
Confidence 6666 699999999999776543 2567888988887765433 5788888887311 3688888854 46699
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc---hhHhhhcCcc--EEEEeccccCCCcee--eEEecCHHH
Q 018240 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV---PVRRLVQAAD--SASVCLSKGLGAPVG--SVIVGSKEF 223 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~---~~~~~~~~~d--~~~~s~~K~~g~~~g--g~~~~~~~~ 223 (359)
|.+++.+++++|.++|++||++||+|++|.... +.+. +...+....| +++.|+||.||.|+. ||++.++++
T Consensus 178 G~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~--~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l 255 (395)
T PRK08175 178 AQCVELEFFEKVVALAKRYDVLVVHDLAYADIV--YDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPEL 255 (395)
T ss_pred CCCCCHHHHHHHHHHHHHcCcEEEEecchHhhc--cCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHHH
Confidence 999999999999999999999999999964322 2221 2222221133 345699999986643 899999999
Q ss_pred HHHHHHHHHhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccch
Q 018240 224 IKKARRLRKTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDS 300 (359)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 300 (359)
++.+.........+.+.. .+.++...+ +.+.+..++.+.++++++.+.|++. ++.+. .+..++++|+.++...
T Consensus 256 ~~~~~~~~~~~~~~~~~~--~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~p~~g~~i~i~l~~~~ 331 (395)
T PRK08175 256 VSALARIKSYHDYGTFTP--LQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVE-MPKASMYVWAKIPEPY 331 (395)
T ss_pred HHHHHHHHhhcccCCCcH--HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCEEEEEEEECCccc
Confidence 999887666544443322 333333333 3345556677888899999999998 77763 4558999999997631
Q ss_pred -HHHHHHHHHHH-HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 301 -KLYAACLLKKL-EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 301 -~~~~~~~~~~l-~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
..+..++...| .++||.+.|+. ..++|+++. .+++.+++++++|.+++++.
T Consensus 332 ~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~--~~~~~~~~al~~l~~~l~~~ 390 (395)
T PRK08175 332 AAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI--ENRDRIRQAIRGIKAMFRAD 390 (395)
T ss_pred CCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHhc
Confidence 12467888776 67999997762 358999994 68899999999999988764
No 96
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.5e-30 Score=231.71 Aligned_cols=338 Identities=13% Similarity=0.152 Sum_probs=231.5
Q ss_pred cccccCCCCCChHHHHHHHHHcCCC-------------CCCccCCChHHHHHHHHHHHHhCC--------C-CeEEcCCc
Q 018240 5 TVDLRSDTVTKPTEAMRAAMASAEV-------------DDDVLMHDPTAFRLETEMAKVMGK--------E-AGLFVPSG 62 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~-------------~~~~~~~~~~~~~l~~~la~~~~~--------~-~~~~~~~g 62 (359)
+|+|...-+....+.+.+.+.+... ....|+...+..+|+++++++++. + ..+++++|
T Consensus 49 ~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G 128 (447)
T PLN02607 49 VIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAG 128 (447)
T ss_pred eEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCC
Confidence 5777777777777788888766422 112355667889999999998852 1 12555555
Q ss_pred -hHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeE
Q 018240 63 -TMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRL 139 (359)
Q Consensus 63 -t~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 139 (359)
++++..++..++ .+||.|+++.|+|..... .+....|++++.++.+ +++.+|++.+++++++.... ..++++
T Consensus 129 ~t~al~~l~~~l~-~pGD~Vlv~~P~Y~~f~~--~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~--~~~vk~ 203 (447)
T PLN02607 129 ATAANELLTFILA-DPGDALLVPTPYYPGFDR--DLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAA--NIRVRG 203 (447)
T ss_pred hHHHHHHHHHHhC-CCCCEEEEcCCCCcchHH--HHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHh--CCCeeE
Confidence 556666666666 699999999999766543 2233578888888765 34568999999988742111 147889
Q ss_pred EEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhc-----C-cc-EEE-EeccccCC
Q 018240 140 ICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQ-----A-AD-SAS-VCLSKGLG 210 (359)
Q Consensus 140 v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~-----~-~d-~~~-~s~~K~~g 210 (359)
|++.+ ++||||.+++.+++++|.++|++|++.+|+||+|....+.. ...+...+.. + .+ +++ .|+||.||
T Consensus 204 lll~n-P~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg 282 (447)
T PLN02607 204 VLITN-PSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLG 282 (447)
T ss_pred EEEeC-CCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCC
Confidence 99955 56699999999999999999999999999999975433321 1223333211 1 22 444 49999998
Q ss_pred Ccee--eEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHH------HHhHHHHhhhHHHHHHHHHHHHhcCCCce
Q 018240 211 APVG--SVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVAL------QENVLVMLDGDHKKAKLLAEGLNQLKGLR 281 (359)
Q Consensus 211 ~~~g--g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 281 (359)
.++- ||+++ ++++.+.++....... . +.+.+.++...+ +.++...++++.++++.+.+.|++. |+.
T Consensus 283 ~~GlRvG~ivs~n~~l~~~~~~~~~~~~--~--s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~ 357 (447)
T PLN02607 283 LPGFRVGTIYSYNDKVVTTARRMSSFTL--V--SSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIE 357 (447)
T ss_pred CCcceEEEEEEcCHHHHHHHHHHhhcCC--C--CHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCC
Confidence 6543 88887 7777776654432221 2 222333333333 2334446677788889999999987 887
Q ss_pred EecCCccceEEEEEeccch----HHHHHHHHHHH-HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 282 VDVDAVETNIVYFEITEDS----KLYAACLLKKL-EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l-~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
+. ++..+.|+|++++... .....++.++| .++||.+.||. ++++|++++ ..+++++++++++|.+++
T Consensus 358 ~~-~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa-~~~~~~l~~gl~Ri~~~l 435 (447)
T PLN02607 358 CL-KGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFA-NMSEDTLEVALKRIHRFM 435 (447)
T ss_pred cc-cCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEec-cCCHHHHHHHHHHHHHHH
Confidence 63 4568899999986410 01234677677 56899998863 568999996 358999999999999999
Q ss_pred HHHHh
Q 018240 351 AGVCE 355 (359)
Q Consensus 351 ~~~~~ 355 (359)
++.+.
T Consensus 436 ~~~~~ 440 (447)
T PLN02607 436 DRRKT 440 (447)
T ss_pred HHHHh
Confidence 87764
No 97
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=100.00 E-value=1e-30 Score=230.79 Aligned_cols=299 Identities=17% Similarity=0.219 Sum_probs=218.5
Q ss_pred hHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCC
Q 018240 38 PTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGT 115 (359)
Q Consensus 38 ~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~ 115 (359)
+...++++.+++++|.+..++++||++++..++.++. ++||.|+++.+.|++.+. + ++..|++++.++.+ .++.
T Consensus 51 ~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~-~~gd~Vl~~~~~h~s~~~-~--~~~~g~~~~~~~~~~~~~~~ 126 (370)
T TIGR02539 51 PPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALC-KEGDWVVLDGLAHYTSYV-A--AERAGLNVKEVPHTGHPEYK 126 (370)
T ss_pred hHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhh-CCCCEEEECCcccHHHHH-H--HHHcCCEEEEEecCCcccCC
Confidence 4567888889999999998889999999999998887 599999999999999885 3 68889999999865 3578
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
+|+++|++.++.... ....++++|+++++ +||+|...+ +++|.++|+++|+++|+|++|+.|..+ .....
T Consensus 127 ~d~~~l~~~l~~~~~-~~~~~~~lv~~~~p-~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~~---~~~~~-- 196 (370)
T TIGR02539 127 VDPEGYGEVIEEVED-ESGKPPVLALLTHV-DGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRMP---VSAKE-- 196 (370)
T ss_pred cCHHHHHHHHHHhhh-ccCCCcEEEEEECC-CCCCccccC---HHHHHHHHHHcCCeEEEECccccCCcC---CCHHH--
Confidence 899999999863110 00025778888665 459999777 789999999999999999998775322 22222
Q ss_pred cCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHHhhCCCcc------hhHHHHHHHHHHHHH---hHHHHhhhHHH
Q 018240 196 QAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRKTLGGGMR------QVGVLCAAALVALQE---NVLVMLDGDHK 265 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~---~~~~~~~~~~~ 265 (359)
.+.|+++.|+||+++++.+ |++++++++++.++.....+..+.. .......++..+++. .++ ...+..+
T Consensus 197 ~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~-~~~~~~~ 275 (370)
T TIGR02539 197 IGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVK-RWDEEVK 275 (370)
T ss_pred cCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 2678888999999986443 8899999999988765543222110 011122233334432 222 2333445
Q ss_pred HHHHHHHHHhcCCCceEe-cCCccceEEEEEeccch------HHHHHHHHHHHHhcCce-eccCCCcEEEEEeCCCCCHH
Q 018240 266 KAKLLAEGLNQLKGLRVD-VDAVETNIVYFEITEDS------KLYAACLLKKLEEHGVL-VMPESSTRVRIVVHHQISAN 337 (359)
Q Consensus 266 ~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~gi~-~~~~~~~~lRi~~~~~~~~~ 337 (359)
+++++++.|+++ |+++. ..+..++++++.++... ..+...+.+.|.++||. +.++...++|+++. ..+++
T Consensus 276 ~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~~~~~~iRis~~-~~t~e 353 (370)
T TIGR02539 276 KTRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRSGQTKYFKLSVY-GLTKE 353 (370)
T ss_pred HHHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccCCcceEEEEEec-CCCHH
Confidence 567899999998 88863 23567889988875310 11345799999999997 66665678999975 68999
Q ss_pred HHHHHHHHHHHHHHHH
Q 018240 338 DVHYTLSCFQKIYAGV 353 (359)
Q Consensus 338 ~i~~~~~~l~~~~~~~ 353 (359)
++++++++|+++++++
T Consensus 354 ~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 354 QVEYVVDSFEEIVEEY 369 (370)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999887653
No 98
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=1.4e-30 Score=233.16 Aligned_cols=325 Identities=16% Similarity=0.138 Sum_probs=231.2
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCCC------CccC----CChHHHHHHHHHHHHhCC-C-Ce-EEcCCchHHHHHHH
Q 018240 4 RTVDLRSDTVTKPTEAMRAAMASAEVDD------DVLM----HDPTAFRLETEMAKVMGK-E-AG-LFVPSGTMGNLISV 70 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~~------~~~~----~~~~~~~l~~~la~~~~~-~-~~-~~~~~gt~a~~~~l 70 (359)
+.+.|++...+.+++.+.+++.+..... ..+. ......++++.+++++|. + .. ++++|+|+++..++
T Consensus 23 ~~iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~ 102 (406)
T PRK09295 23 PLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINLVA 102 (406)
T ss_pred ceEEEeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHH
Confidence 3688888887777778888876533211 1111 123457889999999997 3 23 56666677777777
Q ss_pred HHh---hhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018240 71 LVH---CETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 71 ~~~---~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
.++ ..++||+|+++++.|.+.+... ..++..|++++.++.+.++.+|+++|++.++ +++++|+++++.
T Consensus 103 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~--------~~t~lv~l~~~~ 174 (406)
T PRK09295 103 NSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFD--------ERTRLLAITHVS 174 (406)
T ss_pred HHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcC--------CCcEEEEEecch
Confidence 654 3358999999999987753211 2345678899999888888899999999998 688999996554
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHH
Q 018240 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIK 225 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~ 225 (359)
||||..+| +++|.++|+++|+++++|++|+.+... .+... .++|++++|+||.+| |.| |+++.++++.+
T Consensus 175 -n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~~~---~~~~~--~~~D~~~~s~~K~~g-p~G~G~l~~~~~~~~ 244 (406)
T PRK09295 175 -NVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMHHP---VDVQA--LDCDFYVFSGHKLYG-PTGIGILYVKEALLQ 244 (406)
T ss_pred -hcccccCC---HHHHHHHHHHcCCEEEEEcccccCccc---cCchh--cCCCEEEeehhhccC-CCCcEEEEEchHhHh
Confidence 59999988 789999999999999999998665432 22333 378999999999766 667 89999888776
Q ss_pred HHHHHHH----------------------hhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCC
Q 018240 226 KARRLRK----------------------TLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKG 279 (359)
Q Consensus 226 ~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g 279 (359)
.+..... ...++. +.....+...+++ ...+...++..++.+++.+.|+++++
T Consensus 245 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~--~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~ 322 (406)
T PRK09295 245 EMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTP--NTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPD 322 (406)
T ss_pred hCCCcccCCceeeeeecCCccccCCchhhcCCCCc--cHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 5431100 001111 1222222233332 23344556677888999999999988
Q ss_pred ceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC------------CcEEEEEeCCCCCHHHHHHHHHHHH
Q 018240 280 LRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES------------STRVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~------------~~~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
+++..+....+++.+.++. .+..++.+.|.++||.+..+. +..+|+|++.+++++|++.++++|+
T Consensus 323 ~~~~~~~~~~~iv~~~~~~---~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~ 399 (406)
T PRK09295 323 LTLYGPQNRLGVIAFNLGK---HHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQ 399 (406)
T ss_pred EEEeCCCCCceEEEEEECC---cCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHH
Confidence 9886543345677777765 356788889999999986543 3479999999999999999999998
Q ss_pred HHHH
Q 018240 348 KIYA 351 (359)
Q Consensus 348 ~~~~ 351 (359)
++..
T Consensus 400 ~i~~ 403 (406)
T PRK09295 400 RIHR 403 (406)
T ss_pred HHHH
Confidence 8754
No 99
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.2e-30 Score=227.24 Aligned_cols=317 Identities=16% Similarity=0.190 Sum_probs=221.8
Q ss_pred ccccccCCCCC-ChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC-eEEcCCchHHHHHHHHHhhhhcCCeE
Q 018240 4 RTVDLRSDTVT-KPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA-GLFVPSGTMGNLISVLVHCETRGSEV 81 (359)
Q Consensus 4 ~~id~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~gt~a~~~~l~~~~~~~g~~v 81 (359)
..+||..+.+. .+++.+.+++.+.......|.. +...++|+.++++++.+. .+++++|++..+..+..++. + +.|
T Consensus 20 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~~-~-~~v 96 (354)
T PRK06358 20 MILDFSANINPLGVPESLKQAITENLDKLVEYPD-PDYLELRKRIASFEQLDLENVILGNGATELIFNIVKVTK-P-KKV 96 (354)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHhhhcCCC-ccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHhC-C-CcE
Confidence 36889887443 4458888888775433334543 457899999999998764 36566665544444444442 4 589
Q ss_pred EecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhH
Q 018240 82 ILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYT 159 (359)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l 159 (359)
++++|+|.. +. ..++..|++++.++.+. ++.+| +++.+.+. .+++++++.+| |||||.+++.+++
T Consensus 97 ~i~~P~y~~-~~--~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~--------~~~~~v~~~~P-~NPtG~~~~~~~~ 163 (354)
T PRK06358 97 LILAPTFAE-YE--RALKAFDAEIEYAELTEETNFAAN-EIVLEEIK--------EEIDLVFLCNP-NNPTGQLISKEEM 163 (354)
T ss_pred EEecCChHH-HH--HHHHHcCCeeEEEeCccccCCCcc-HHHHHhhc--------cCCCEEEEeCC-CCCCCCccCHHHH
Confidence 999999765 44 33677898998887653 35678 66666665 56888888555 6799999999999
Q ss_pred HHHHHHHHHcCcEEEEecccccchhhhcCchhHh-hhcCccEEEE-eccccCCCcee--eEEec-CHHHHHHHHHHHHhh
Q 018240 160 DSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRR-LVQAADSASV-CLSKGLGAPVG--SVIVG-SKEFIKKARRLRKTL 234 (359)
Q Consensus 160 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~-~~~~~d~~~~-s~~K~~g~~~g--g~~~~-~~~~~~~~~~~~~~~ 234 (359)
++|.++|++||++||+||+|..........+... +.....++++ |+||.||.|+. ||++. ++.+.+.+......
T Consensus 164 ~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~- 242 (354)
T PRK06358 164 KKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREP- 242 (354)
T ss_pred HHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCC-
Confidence 9999999999999999999743322111112111 2112335555 99999996544 88887 57787887665432
Q ss_pred CCCcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHH
Q 018240 235 GGGMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLE 312 (359)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (359)
+..+.....++...++ .+.++.++.+.++++.+.+.|++++++++.. +.++++|++++. ..++.+.|.
T Consensus 243 ---~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~--~~g~f~~~~~~~-----~~~~~~~l~ 312 (354)
T PRK06358 243 ---WSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYK--PSVNFIFFKLEK-----PIDLRKELL 312 (354)
T ss_pred ---CcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcC--CcceEEEEEcCc-----hHHHHHHHH
Confidence 2234444555555553 3445466777888999999999987877643 367799998864 268999998
Q ss_pred hcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 313 EHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 313 ~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
++||.+.++. ..++||++ .+.++.++++++|++++
T Consensus 313 ~~gI~v~~~~~f~~~~~~~iRls~---~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 313 KKGILIRSCSNYRGLDENYYRVAV---KSREDNKKLLKALEVIL 353 (354)
T ss_pred HCCeEEEECCCCCCCCCCEEEEEe---CCHHHHHHHHHHHHHHh
Confidence 8999997752 35799998 57899999999998765
No 100
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=3.8e-31 Score=232.76 Aligned_cols=319 Identities=22% Similarity=0.224 Sum_probs=226.7
Q ss_pred ccccccCCCCCC-hHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC-eEEcCCchHHHHHHHHHhhhhcCCeE
Q 018240 4 RTVDLRSDTVTK-PTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA-GLFVPSGTMGNLISVLVHCETRGSEV 81 (359)
Q Consensus 4 ~~id~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~gt~a~~~~l~~~~~~~g~~v 81 (359)
.+|||.++.+.. |.+.+.+++.+.......|+ .++..++++.++++++.+. .+++++|+++....+.....++||.|
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~-~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~~gd~V 101 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAGVNRYP-DMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEV 101 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHhcCcCC-CCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcCCCCEE
Confidence 468899886654 66889888877543334453 4688999999999999764 47777777765555444444699999
Q ss_pred EecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHH
Q 018240 82 ILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDS 161 (359)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~ 161 (359)
+++.|+|.. +. ...+..|.+++.++.+.++.+|++.+++.++ +++++|++++ ++||||.+++.+++.+
T Consensus 102 li~~p~y~~-~~--~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~--------~~~~~v~l~~-p~NPtG~~~~~~~l~~ 169 (352)
T PRK03321 102 IFAWRSFEA-YP--ILVQVAGATPVQVPLTPDHTHDLDAMAAAIT--------DRTRLIFVCN-PNNPTGTVVTPAELAR 169 (352)
T ss_pred EeCCCCHHH-HH--HHHHHcCCEEEEccCCCCCCCCHHHHHHhhc--------cCCCEEEEeC-CCCCcCCCcCHHHHHH
Confidence 999998654 33 2367788899999877668889999999987 6788999965 5669999999766666
Q ss_pred HHHHHHHcCcEEEEecccccchhhhcC-chhHhhhcCccEEEE-eccccCCCce-e-eEEecCHHHHHHHHHHHHhhCCC
Q 018240 162 VGEIAKKHGLKLHIDGARIFNAAVALG-VPVRRLVQAADSASV-CLSKGLGAPV-G-SVIVGSKEFIKKARRLRKTLGGG 237 (359)
Q Consensus 162 i~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~~~d~~~~-s~~K~~g~~~-g-g~~~~~~~~~~~~~~~~~~~~~~ 237 (359)
+++.+ +++++||+|++|......... .....+....+++++ |+||.||.|+ . ||+++++++++.+..... ..+
T Consensus 170 l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~--~~~ 246 (352)
T PRK03321 170 FLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVAV--PFS 246 (352)
T ss_pred HHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhcC--CCC
Confidence 66554 369999999996432221111 111222223345555 9999998643 2 889999999998875432 222
Q ss_pred cchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhc
Q 018240 238 MRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEH 314 (359)
Q Consensus 238 ~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 314 (359)
.+.+.+.++..++ ..+.+ .+++..++++.+.+.|++. ++.+. +..++++|+.++. +..++.+.|.++
T Consensus 247 --~s~~~q~~a~~~l~~~~~~~~-~~~~~~~~r~~~~~~L~~~-~~~~~--~~~g~~i~i~l~~----~~~~~~~~l~~~ 316 (352)
T PRK03321 247 --VNSLAQAAAIASLAAEDELLE-RVDAVVAERDRVRAALRAA-GWTVP--PSQANFVWLPLGE----RTADFAAAAAEA 316 (352)
T ss_pred --CCHHHHHHHHHHhcCHHHHHH-HHHHHHHHHHHHHHHHHHC-CCccC--CCCCCEEEEeCCC----CHHHHHHHHHHC
Confidence 2444444444444 23333 4445556667788889887 77652 3468899998854 467899999999
Q ss_pred CceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 315 GVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 315 gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
||.+.+.+..++||++ .+.++.++++++|++++.
T Consensus 317 gI~v~~~~~~~iRi~~---~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 317 GVVVRPFAGEGVRVTI---GAPEENDAFLRAARAWRA 350 (352)
T ss_pred CEEEEccCCCcEEEee---CCHHHHHHHHHHHHHHhc
Confidence 9999887667899998 578999999999998764
No 101
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=2.4e-30 Score=232.03 Aligned_cols=328 Identities=17% Similarity=0.207 Sum_probs=232.8
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCCC--C-c---cC----CChHHHHHHHHHHHHhCCC-C--eEEcCCchHHHHHHH
Q 018240 4 RTVDLRSDTVTKPTEAMRAAMASAEVDD--D-V---LM----HDPTAFRLETEMAKVMGKE-A--GLFVPSGTMGNLISV 70 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~~--~-~---~~----~~~~~~~l~~~la~~~~~~-~--~~~~~~gt~a~~~~l 70 (359)
..+.|..+....+++.+.+++.+..... . . +. ......++++.+++++|.+ . .++++|+++++..++
T Consensus 18 ~~~yld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~ 97 (403)
T TIGR01979 18 PLVYLDSAATSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVA 97 (403)
T ss_pred ceEEEeCccccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHH
Confidence 3577888888777777888876533211 1 0 11 1234578899999999987 2 366666777777766
Q ss_pred HHh---hhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018240 71 LVH---CETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 71 ~~~---~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
.++ ..++|++|+++++.|.+.+... ..+...|.+++.++.++++.+|++++++.++ +++++|+++++.
T Consensus 98 ~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~--------~~~~lv~~~~~~ 169 (403)
T TIGR01979 98 YSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLT--------EKTKLVAITHVS 169 (403)
T ss_pred HHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhc--------cCCeEEEEEccc
Confidence 664 2258999999999988754211 1245678899999888888899999999998 789999996655
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHH
Q 018240 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIK 225 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~ 225 (359)
||||..+| +++|.++|+++|+++|+|++|+.+... .....+ +.|++++|+||++| |.| |+++.++++.+
T Consensus 170 -~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~~~---~~~~~~--~~d~~~~s~~K~~g-p~G~g~l~~~~~~~~ 239 (403)
T TIGR01979 170 -NVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPHMP---VDVQAL--DCDFYVFSGHKMYG-PTGIGVLYGKEELLE 239 (403)
T ss_pred -ccccccCC---HHHHHHHHHHcCCEEEEEchhhcCccc---cCcccc--CCCEEEEecccccC-CCCceEEEEchHHHh
Confidence 59999988 789999999999999999998665432 222222 68999999999887 666 88888888776
Q ss_pred HHHHHHHh--------------------hCCCcchhHHHHHHHHHHHHH----hHHHHhhhHHHHHHHHHHHHhcCCCce
Q 018240 226 KARRLRKT--------------------LGGGMRQVGVLCAAALVALQE----NVLVMLDGDHKKAKLLAEGLNQLKGLR 281 (359)
Q Consensus 226 ~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~l~~~l~~~~g~~ 281 (359)
.+...... +..++ .+.....+...+++. ..+...++..+.++++.+.|+++++++
T Consensus 240 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt-~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~ 318 (403)
T TIGR01979 240 QMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGT-PNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLR 318 (403)
T ss_pred cCCCeecCCCceeecccCccccCCChhhcCCCC-ccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 64321100 00011 111222222333322 234466778888999999999988998
Q ss_pred EecCCc---cceEEEEEeccchHHHHHHHHHHHHhcCceeccCC------------CcEEEEEeCCCCCHHHHHHHHHHH
Q 018240 282 VDVDAV---ETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES------------STRVRIVVHHQISANDVHYTLSCF 346 (359)
Q Consensus 282 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~------------~~~lRi~~~~~~~~~~i~~~~~~l 346 (359)
+..++. .++++.+.++. .+..++.+.|.++||.+..+. ..++|++++..++++|+++++++|
T Consensus 319 ~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l 395 (403)
T TIGR01979 319 IYGPRDAEDRGGIISFNVEG---VHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEAL 395 (403)
T ss_pred EeCCCCccccCceEEEEeCC---cCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHH
Confidence 864431 36677777764 356788889999999986542 468999999899999999999999
Q ss_pred HHHHHHH
Q 018240 347 QKIYAGV 353 (359)
Q Consensus 347 ~~~~~~~ 353 (359)
+++++.+
T Consensus 396 ~~~~~~~ 402 (403)
T TIGR01979 396 KKVRKFF 402 (403)
T ss_pred HHHHHHh
Confidence 9887765
No 102
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=1.5e-30 Score=232.87 Aligned_cols=323 Identities=18% Similarity=0.160 Sum_probs=217.6
Q ss_pred cccccccCCCCCCh-HHHHHHHHHcCCC------CCCccCCChHHHHHHHHHHHHh------CCC-CeEEcCCchHHHHH
Q 018240 3 TRTVDLRSDTVTKP-TEAMRAAMASAEV------DDDVLMHDPTAFRLETEMAKVM------GKE-AGLFVPSGTMGNLI 68 (359)
Q Consensus 3 ~~~id~~~~~~~~~-~~~~~~a~~~~~~------~~~~~~~~~~~~~l~~~la~~~------~~~-~~~~~~~gt~a~~~ 68 (359)
+.+++|..+.+..+ ++.+.+++.+... ....|+..++..++++++++++ +.+ ..+++++|++..+.
T Consensus 34 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~ 113 (409)
T PRK07590 34 AKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTG 113 (409)
T ss_pred CceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHH
Confidence 35788988876644 3677777665432 2235777788899999999986 222 23777777665555
Q ss_pred HHHHhhhhcCCeEEecCCCcceeeccccccccCCcc-----------ceeeecCCCCCCCHHHHHHHhcCCCCCccCCce
Q 018240 69 SVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVH-----------PRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTT 137 (359)
Q Consensus 69 ~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~-----------~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 137 (359)
.+..++ .+||+|++++|+|..... .++..|.+ ++.++.+.++.+..+ +.+ +++
T Consensus 114 ~l~~~~-~~gd~V~v~~P~Y~~~~~---~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d-----~~~-------~~~ 177 (409)
T PRK07590 114 NILDIF-GPDNTIAVTDPVYPVYVD---TNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPE-----LPE-------EKV 177 (409)
T ss_pred HHHHhc-CCCCEEEEeCCCCcchHH---HHHHcCCcccccccccccceeEeecccccCCccc-----Ccc-------cCc
Confidence 566666 599999999999766543 46677765 777766533222221 111 578
Q ss_pred eEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhcCcc-EEE-EeccccCCCcee
Q 018240 138 RLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQAAD-SAS-VCLSKGLGAPVG 214 (359)
Q Consensus 138 ~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~~~d-~~~-~s~~K~~g~~~g 214 (359)
++|+++ .++||||.+++.+++++|+++|++|+++||+||+|........ ..+...+....+ +++ .|+||.+|.|+.
T Consensus 178 k~i~l~-nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGl 256 (409)
T PRK07590 178 DIIYLC-FPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGT 256 (409)
T ss_pred eEEEEe-CCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCc
Confidence 899985 5567999999999999999999999999999999653222110 112222221122 454 499999986544
Q ss_pred --eEEecCHHHHHHH------------HHHHHhhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhc
Q 018240 215 --SVIVGSKEFIKKA------------RRLRKTLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQ 276 (359)
Q Consensus 215 --g~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~ 276 (359)
||+++++++++.+ .........+. +.+.+.++...+. .+.++.++.+.++++.+.+.|++
T Consensus 257 RiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 334 (409)
T PRK07590 257 RCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGV--SYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLES 334 (409)
T ss_pred eeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCc--CHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999998888732 11111111122 3334444444442 34444666778888999999999
Q ss_pred CCCceEecCCccceEEEEEeccchHHHHHHHHHHH-HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 277 LKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKL-EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 277 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
. ++.+. ++..++++|++++.. .+..++.+.| +++||.+.|+. .+++||++ ..+++++++++++|.++
T Consensus 335 ~-~~~~~-~~~g~~f~wi~~~~~--~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 335 A-GFEVY-GGVNAPYIWVKTPDG--MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSA--FGSRENVLEAMERIKKA 408 (409)
T ss_pred c-CCcee-cCCcceEEEEECCCC--CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEc--cCCHHHHHHHHHHHHhh
Confidence 8 77764 345788999999753 4567888887 57899997763 45899996 46889999999999765
Q ss_pred H
Q 018240 350 Y 350 (359)
Q Consensus 350 ~ 350 (359)
+
T Consensus 409 ~ 409 (409)
T PRK07590 409 L 409 (409)
T ss_pred C
Confidence 3
No 103
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=100.00 E-value=1.7e-30 Score=228.93 Aligned_cols=325 Identities=23% Similarity=0.253 Sum_probs=231.6
Q ss_pred ccccccCCCCCCh--HHHHHHHHHcCCCCC----C----ccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHh
Q 018240 4 RTVDLRSDTVTKP--TEAMRAAMASAEVDD----D----VLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~~~--~~~~~~a~~~~~~~~----~----~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~ 73 (359)
.+++|.+..+.+. +|++++++.+..... . ..+..+...++++.++++++.+..+++++|++++..++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~~~ 81 (349)
T cd06454 2 KVLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLSTL 81 (349)
T ss_pred CceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHHHh
Confidence 4678888766543 388888888755321 1 12457778999999999999988899999999999888877
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee
Q 018240 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC 153 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~ 153 (359)
+ ++|++|++++++|.+... + +...|++++.++. +|.+++++.+++.. ...+++++++++ .+||||..
T Consensus 82 ~-~~gd~Vl~~~~~~~~~~~-~--~~~~g~~~~~~~~-----~~~~~le~~i~~~~---~~~~~~~v~~~~-~~~~tG~~ 148 (349)
T cd06454 82 A-GKGDLIISDSLNHASIID-G--IRLSGAKKRIFKH-----NDMEDLEKLLREAR---RPYGKKLIVTEG-VYSMDGDI 148 (349)
T ss_pred c-CCCCEEEEehhhhHHHHH-H--HHHcCCceEEecC-----CCHHHHHHHHHHhh---ccCCCeEEEEec-cccCCCCc
Confidence 7 599999999999988664 2 5667888877753 37888888887421 003466777745 45599998
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh---hcCccEEEEeccccCCCceeeEEecCHHHHHHHHHH
Q 018240 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL---VQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRL 230 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~ 230 (359)
.+ +++|.++|+++|+++|+|++|++|.....+.....+ ..+.|+++.|+||+++. .||+++.++++.+.+...
T Consensus 149 ~~---~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~gG~i~~~~~~~~~~~~~ 224 (349)
T cd06454 149 AP---LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA-VGGYIAGSKELIDYLRSY 224 (349)
T ss_pred cC---HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc-cCCEEECCHHHHHHHHHh
Confidence 66 899999999999999999998765543222211111 23567888899999986 567888888888877654
Q ss_pred HHhhCCCcchhHHHHHHHHHHHHHh--HHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHH
Q 018240 231 RKTLGGGMRQVGVLCAAALVALQEN--VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLL 308 (359)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (359)
...+..+....+...+++..+++.. .+...++..++++++.+.|+++ ++....+ ....+.++.++. ..+..++.
T Consensus 225 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~-~~~~~~~~~~~~--~~~~~~~~ 300 (349)
T cd06454 225 ARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL-GFPVGGS-PSHIIPPLIGDD--PAKAVAFS 300 (349)
T ss_pred chhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCcccCC-CCCcEEEEeCCC--hHHHHHHH
Confidence 4333322223444444555555432 2336677888999999999987 7776433 233334444432 24678999
Q ss_pred HHHHhcCceeccC-------CCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 309 KKLEEHGVLVMPE-------SSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 309 ~~l~~~gi~~~~~-------~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
+.|.++||.+.+. +...+|++++..++++++++++++|+++
T Consensus 301 ~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 301 DALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred HHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 9998889998642 2468999998889999999999999764
No 104
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.6e-30 Score=228.58 Aligned_cols=316 Identities=15% Similarity=0.082 Sum_probs=218.1
Q ss_pred ccccccCCCC-CChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC-eEEcCCchH-HHHHHHHHhhhhcCCe
Q 018240 4 RTVDLRSDTV-TKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA-GLFVPSGTM-GNLISVLVHCETRGSE 80 (359)
Q Consensus 4 ~~id~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~gt~-a~~~~l~~~~~~~g~~ 80 (359)
..+||..+.+ .+|++.+.+++.+.......|.. +...++++.++++++.+. .+++++|++ ++..++.. + .+|+
T Consensus 21 ~~i~l~~~~~~~~~p~~~~~a~~~~~~~~~~y~~-~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~-l-~~g~- 96 (356)
T PRK08056 21 QLLDFSANINPLGMPVSLKRAIIDNLDCAERYPD-VEYRHLHQALARHHQVPASWILAGNGETESIFAVVSG-L-KPRR- 96 (356)
T ss_pred hEEEeccccCCCCCCHHHHHHHHHHHHhcccCcC-ccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHH-h-CCCC-
Confidence 3588887744 45668888888765433334543 457999999999998764 365666654 55555554 4 3665
Q ss_pred EEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhh
Q 018240 81 VILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEY 158 (359)
Q Consensus 81 vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~ 158 (359)
+++..|+|.. +. ..++..|.+++.++.++ ++.+| +++.+.+. +++++|++++ ++||||..++.++
T Consensus 97 viv~~P~y~~-~~--~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~--------~~~k~v~l~~-p~NPTG~~~~~~~ 163 (356)
T PRK08056 97 AMIVTPGFAE-YR--RALQQVGCEIRRYSLREADGWQLT-DAILEALT--------PDLDCLFLCT-PNNPTGLLPERQL 163 (356)
T ss_pred EEEeCCCcHH-HH--HHHHHcCCeEEEEecccccCCCcc-HHHHHhcc--------CCCCEEEEeC-CcCCCCCCCCHHH
Confidence 7777888655 43 34778899999997653 34445 35555565 6788999855 5669999999999
Q ss_pred HHHHHHHHHHcCcEEEEecccccchhhhcCchhHh-hhc-CccEEEEeccccCCCcee--eEEec-CHHHHHHHHHHHHh
Q 018240 159 TDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRR-LVQ-AADSASVCLSKGLGAPVG--SVIVG-SKEFIKKARRLRKT 233 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~-~~~-~~d~~~~s~~K~~g~~~g--g~~~~-~~~~~~~~~~~~~~ 233 (359)
+++|+++|++++++||+|++|.... ..+....+ +.. ...+++.|+||+||.++. ||++. ++++++.++.....
T Consensus 164 ~~~i~~~a~~~~~~ii~De~y~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~~ 241 (356)
T PRK08056 164 LQAIAERCKSLNIALILDEAFIDFI--PDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQMP 241 (356)
T ss_pred HHHHHHHHHhcCCEEEEecchhccC--CcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCC
Confidence 9999999999999999999964322 12221111 211 223555699999996544 88887 56777776543221
Q ss_pred hCCCcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHH
Q 018240 234 LGGGMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKL 311 (359)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (359)
+..+...+.++...++ .+..+.++++.++++++.+.|++++++.+. +..++++|+.++. +..++.+.|
T Consensus 242 ----~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~l 311 (356)
T PRK08056 242 ----WSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVW--PGRANYLFLRCER----PDIDLQRAL 311 (356)
T ss_pred ----CchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc--CCCCcEEEEEcCC----ChHHHHHHH
Confidence 2223344444444442 334445667888899999999988787764 3478999998875 356889999
Q ss_pred HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 312 EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 312 ~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.++||.+.++. .+++||++ .+.++.+.++++|+++++
T Consensus 312 ~~~gI~v~~~~~f~~~~~~~iRis~---~~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 312 LTQRILIRSCANYPGLDSRYYRVAI---RSAAENERLLAALRNVLT 354 (356)
T ss_pred HHCCeEEEECCCCCCCCCCEEEEEE---cCHHHHHHHHHHHHHHHc
Confidence 88999986553 35899998 367999999999987654
No 105
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=1e-30 Score=232.18 Aligned_cols=319 Identities=16% Similarity=0.189 Sum_probs=227.6
Q ss_pred cccCCCCCChHHHHHHHHHcCCCCCC------ccCC----ChHHHHHHHHHHHHhCCC---CeEEcCCchHHHHHHHHHh
Q 018240 7 DLRSDTVTKPTEAMRAAMASAEVDDD------VLMH----DPTAFRLETEMAKVMGKE---AGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 7 d~~~~~~~~~~~~~~~a~~~~~~~~~------~~~~----~~~~~~l~~~la~~~~~~---~~~~~~~gt~a~~~~l~~~ 73 (359)
.|+.+....+++.+.+++.+...... .+.. .....++++.++++++.+ ..++++|+++++..++.++
T Consensus 2 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l 81 (373)
T cd06453 2 YLDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGL 81 (373)
T ss_pred cccCccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHh
Confidence 45666666666777777766432111 1111 234578889999999987 3467788888999999888
Q ss_pred hhh--cCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018240 74 CET--RGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 74 ~~~--~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
... +|++|++++++|++.+... ..++..|++++.++.+.++.+|++++++.++ +++++|++.++++ ||
T Consensus 82 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~~~~-~t 152 (373)
T cd06453 82 GRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLT--------ERTKLVAVTHVSN-VL 152 (373)
T ss_pred hhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhc--------CCceEEEEeCccc-cc
Confidence 743 8899999999998864311 2245678899999888888899999999998 6788999866555 99
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHH
Q 018240 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRL 230 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~ 230 (359)
|...| +++|.++|+++|++||+|++|+.+... ..... .++|++++|++|+++++..|+++.++++++.++..
T Consensus 153 G~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~---~~~~~--~~~d~~~~s~~K~~~~~g~g~~~~~~~~~~~~~~~ 224 (373)
T cd06453 153 GTINP---VKEIGEIAHEAGVPVLVDGAQSAGHMP---VDVQD--LGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPY 224 (373)
T ss_pred CCcCC---HHHHHHHHHHcCCEEEEEhhhhcCcee---eeccc--cCCCEEEeccccccCCCCcEEEEEchHHhhcCCCe
Confidence 99988 789999999999999999998665432 11222 26899999999999874448898998888776533
Q ss_pred HHh--------------------hCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecC-
Q 018240 231 RKT--------------------LGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVD- 285 (359)
Q Consensus 231 ~~~--------------------~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~- 285 (359)
... +..++ .+.....+...+++ ...+...++..++++++.+.|++++++++..+
T Consensus 225 ~~g~~~~~~~~~~~~~~~~~~~~~~~~t-~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 303 (373)
T cd06453 225 GGGGEMIEEVSFEETTYADLPHKFEAGT-PNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDA 303 (373)
T ss_pred ecCCCccccccccccccCCCccccCCCC-CCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCc
Confidence 210 00001 11111222222332 23344666777889999999999988887532
Q ss_pred CccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC------------CcEEEEEeCCCCCHHHHHHHHHHH
Q 018240 286 AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES------------STRVRIVVHHQISANDVHYTLSCF 346 (359)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~------------~~~lRi~~~~~~~~~~i~~~~~~l 346 (359)
...++++++.++. .+..++.+.|.++||.+.+++ ..++|++++..++++|+++++++|
T Consensus 304 ~~~~~~~~~~~~~---~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 304 EDRAGVVSFNLEG---IHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred cccCCeEEEEECC---cCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 2246677787764 477899999999999885432 468999999999999999999864
No 106
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=2.6e-30 Score=231.70 Aligned_cols=330 Identities=18% Similarity=0.182 Sum_probs=229.7
Q ss_pred ccccccCCC-CCC-hHHHHHHHHHcCCCC-CCc-------cCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHh
Q 018240 4 RTVDLRSDT-VTK-PTEAMRAAMASAEVD-DDV-------LMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~-~~~-~~~~~~~a~~~~~~~-~~~-------~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~ 73 (359)
.+|||.++. +.. ++|.+.+++.+.... ... .+..+...++++.+++++|.+..+++++|++++..++.++
T Consensus 43 ~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~~~i~~tsG~~a~~~~~~~l 122 (397)
T PRK06939 43 EVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTEDAILYSSCFDANGGLFETL 122 (397)
T ss_pred eEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCCcEEEEcChHHHHHHHHHHh
Confidence 568998876 344 347777766654322 111 1234556789999999999888899999999999988888
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee
Q 018240 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC 153 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~ 153 (359)
+ ++||.|++++|+|++... + +...+.+++.++. .|++++++.+++.... ..++++|++.+.. |++|..
T Consensus 123 ~-~~gd~vi~~~~~~~~~~~-~--~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~--~~~~~~v~~~~v~-~~~G~~ 190 (397)
T PRK06939 123 L-GKEDAIISDALNHASIID-G--VRLCKAKRYRYAN-----NDMADLEAQLKEAKEA--GARHKLIATDGVF-SMDGDI 190 (397)
T ss_pred C-CCCCEEEEEhhhhHHHHH-H--HHhcCCceEEeCC-----CCHHHHHHHHHhhhcc--CCCCeEEEEecCc-CCCCCc
Confidence 7 599999999999988664 2 5666777777654 3888998888742111 1367788775544 488985
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH---hhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHH
Q 018240 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR---RLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRL 230 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~---~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~ 230 (359)
. ++++|.++|++||++||+|++|.++.....+.... .+....|+++.|+||+++++.+||+++++++++.+...
T Consensus 191 ~---~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~~~~~~~~~l~~~ 267 (397)
T PRK06939 191 A---PLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTAGRKEVIDWLRQR 267 (397)
T ss_pred C---CHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEEeCHHHHHHHHHh
Confidence 4 48999999999999999999986554332222111 12224678888999999656679999999998887654
Q ss_pred HHhhCCCcchhHHHHHHHHHHHHHhH--HHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHH
Q 018240 231 RKTLGGGMRQVGVLCAAALVALQENV--LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLL 308 (359)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (359)
...+.......+..++++..+++... ++.++++.++++++.+.|+++ ++++.. ..+.++++.++. ..+..++.
T Consensus 268 ~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~--~~~~~~~~~~~~--~~~~~~~~ 342 (397)
T PRK06939 268 SRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAA-GFTLGP--GEHPIIPVMLGD--AKLAQEFA 342 (397)
T ss_pred CccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCcCC--CCCCEEEEEECC--HHHHHHHH
Confidence 32221111123333444444443221 236677888999999999988 776532 244555555543 24678899
Q ss_pred HHHHhcCceeccC-------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 309 KKLEEHGVLVMPE-------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 309 ~~l~~~gi~~~~~-------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+.|.++||.+.+. +..++|++++..++++++++++++|++++++.
T Consensus 343 ~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 343 DRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred HHHHHCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 9998889988532 23579999988899999999999999988765
No 107
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=3.3e-30 Score=227.87 Aligned_cols=317 Identities=18% Similarity=0.118 Sum_probs=215.7
Q ss_pred ccccccCCCCCCh-HHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHh----CC--C-CeEEcCCchH-HHHHHHHHhh
Q 018240 4 RTVDLRSDTVTKP-TEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVM----GK--E-AGLFVPSGTM-GNLISVLVHC 74 (359)
Q Consensus 4 ~~id~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~--~-~~~~~~~gt~-a~~~~l~~~~ 74 (359)
.++||+.+.+..+ ++.+.+++.+.......|....+..++++++++++ |. + ..+++++|++ ++..++..++
T Consensus 25 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~ 104 (374)
T PRK05839 25 KGLDLTIGEPQFETPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVL 104 (374)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHh
Confidence 6799999877644 47788887764433455776677889999988775 42 2 2366666665 4445555554
Q ss_pred -hhcCCeEEecCCCcceeeccccccccCCccceeeecCCC--CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018240 75 -ETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQD--GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 75 -~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
.++|+.|+++.|+|..... .+...|++++.++.+.+ +.+|..+. .+ .++++|++. .+|||||
T Consensus 105 ~~~~gd~vlv~~P~y~~~~~---~~~~~g~~v~~v~~~~~~~~~~d~~~~--~~---------~~~k~v~i~-nP~NPTG 169 (374)
T PRK05839 105 FDKQNPTIAYPNPFYQIYEG---AAIASRAKVLLMPLTKENDFTPSLNEK--EL---------QEVDLVILN-SPNNPTG 169 (374)
T ss_pred cCCCCCEEEECCCCchhhHH---HHHhcCCEEEEeecccccCCcCCcchh--hh---------ccccEEEEe-CCCCCcC
Confidence 2478999999999766443 36788999999977543 44454332 22 357899985 5667999
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh-----cC-ccEEEE-eccccCCCcee--eEEecCHH
Q 018240 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV-----QA-ADSASV-CLSKGLGAPVG--SVIVGSKE 222 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-----~~-~d~~~~-s~~K~~g~~~g--g~~~~~~~ 222 (359)
.+++.+++++|+++|+++|++||+||+|..........+..... .. ..++++ |+||.|+.|+- ||++++++
T Consensus 170 ~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~ 249 (374)
T PRK05839 170 RTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDAS 249 (374)
T ss_pred cccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCHH
Confidence 99999999999999999999999999964321110111111110 01 235554 99999876644 99999999
Q ss_pred HHHHHHHHHHhhCCCcchhHHHHHHHHHHH--HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccch
Q 018240 223 FIKKARRLRKTLGGGMRQVGVLCAAALVAL--QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDS 300 (359)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 300 (359)
+++.+.......+.+.+ ...+.++...+ +.+.++.++.+.++++.+.+.| ++. .+.+++++|++++.
T Consensus 250 ~~~~~~~~~~~~~~~~~--~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l----~~~---~p~gg~fi~~~~~~-- 318 (374)
T PRK05839 250 ILKKYKAYRTYLGCASP--LPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREIL----GIT---IPPATFYVWLPVDN-- 318 (374)
T ss_pred HHHHHHHHHhhcCCCCC--hHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhc----CCC---CCCeeEEEEEeCCC--
Confidence 99988776655444432 23333333333 3444445666667777766655 333 35689999999864
Q ss_pred HHHHHHHHHHH-HhcCceeccCC--------CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 301 KLYAACLLKKL-EEHGVLVMPES--------STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 301 ~~~~~~~~~~l-~~~gi~~~~~~--------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
..++.++| +++||.+.|+. .+++||++. .+++++++++++|.++++
T Consensus 319 ---~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~--~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 319 ---DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALV--YDTPKLEKALEIIKTYLE 373 (374)
T ss_pred ---hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHhh
Confidence 35788888 46999997752 478999995 579999999999998875
No 108
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=2.5e-30 Score=232.72 Aligned_cols=330 Identities=15% Similarity=0.165 Sum_probs=233.2
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCCC--C----ccC----CChHHHHHHHHHHHHhCCC--C-eEEcCCchHHHHHHH
Q 018240 4 RTVDLRSDTVTKPTEAMRAAMASAEVDD--D----VLM----HDPTAFRLETEMAKVMGKE--A-GLFVPSGTMGNLISV 70 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~~--~----~~~----~~~~~~~l~~~la~~~~~~--~-~~~~~~gt~a~~~~l 70 (359)
+.+.|.+.....+++.+.+++.+..... . .+. ..+...++++.+++++|.+ . .++++|+|+++..++
T Consensus 32 ~~iyLd~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~ 111 (424)
T PLN02855 32 KLVYLDNAATSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINLVA 111 (424)
T ss_pred CeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHH
Confidence 3678888877777778888876632211 0 111 1223578899999999984 2 366667777777777
Q ss_pred HHh---hhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018240 71 LVH---CETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 71 ~~~---~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
..+ ..++|++|+++.+.|.+.+... ..++..|.+++.++.+.++.+|++++++.++ +++++|+++++
T Consensus 112 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~--------~~t~lv~i~~~- 182 (424)
T PLN02855 112 YTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLS--------EKTKLVATHHV- 182 (424)
T ss_pred HHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhc--------cCceEEEEeCc-
Confidence 653 2358999999999987754200 2245678899999877777799999999998 78999999654
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHH
Q 018240 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIK 225 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~ 225 (359)
+||||..+| +++|.++|+++|+++++|++|+.+.. ......+ ++|+++.|+||.+| |.| |+++.++++++
T Consensus 183 ~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~g~~---~~~~~~~--~~d~~~~s~~K~~g-p~G~G~l~~~~~~~~ 253 (424)
T PLN02855 183 SNVLGSILP---VEDIVHWAHAVGAKVLVDACQSVPHM---PVDVQTL--GADFLVASSHKMCG-PTGIGFLWGKSDLLE 253 (424)
T ss_pred cccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCc---CCCchhc--CCCEEEeecccccC-CCccEEEEEchhhhh
Confidence 459999998 78999999999999999999865433 2222222 68999999999665 666 89999888877
Q ss_pred HHHHHHH--------------------hhCCCcchhHHHH-HHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCc
Q 018240 226 KARRLRK--------------------TLGGGMRQVGVLC-AAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGL 280 (359)
Q Consensus 226 ~~~~~~~--------------------~~~~~~~~~~~~~-~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~ 280 (359)
.+..... .+..++ ..... ++...+++ ...+...++..+.++++++.|++++++
T Consensus 254 ~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT--~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~ 331 (424)
T PLN02855 254 SMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGT--PAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGV 331 (424)
T ss_pred cCCCEecCCCceeeeecCccccCCChhhccCCC--hHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 6532210 011111 11111 22222332 244446667778899999999999899
Q ss_pred eEecCC-----ccceEEEEEeccchHHHHHHHHHHHHhc-CceeccCC------------CcEEEEEeCCCCCHHHHHHH
Q 018240 281 RVDVDA-----VETNIVYFEITEDSKLYAACLLKKLEEH-GVLVMPES------------STRVRIVVHHQISANDVHYT 342 (359)
Q Consensus 281 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~~------------~~~lRi~~~~~~~~~~i~~~ 342 (359)
++..+. ..++++.+.++. .+..++.+.|.++ ||.+..+. ..++|++++++++++|++++
T Consensus 332 ~i~~~~~~~~~~r~~~v~~~~~~---~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l 408 (424)
T PLN02855 332 RIYGPKPSEGVGRAALCAFNVEG---IHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAF 408 (424)
T ss_pred EEeCCCcccccCcccEEEEEECC---cCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHH
Confidence 886432 235677788764 3677899999665 99986543 35799999999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 018240 343 LSCFQKIYAGVCEE 356 (359)
Q Consensus 343 ~~~l~~~~~~~~~~ 356 (359)
++.|+++++.++.-
T Consensus 409 ~~~l~~~~~~~~~~ 422 (424)
T PLN02855 409 IHALKDTIAFFSSF 422 (424)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999887653
No 109
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=6.3e-30 Score=231.60 Aligned_cols=336 Identities=13% Similarity=0.116 Sum_probs=223.7
Q ss_pred cccccCCCCCChHHHHHHHHHcCCC-------------CCCccCCChHHHHHHHHHHHHhCC--------C-CeEEcC-C
Q 018240 5 TVDLRSDTVTKPTEAMRAAMASAEV-------------DDDVLMHDPTAFRLETEMAKVMGK--------E-AGLFVP-S 61 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~-------------~~~~~~~~~~~~~l~~~la~~~~~--------~-~~~~~~-~ 61 (359)
+|++...-+....+.+.+.+.+... ....|+...+..+++++++++++. + ..++++ |
T Consensus 48 ~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~G 127 (496)
T PLN02376 48 IIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGG 127 (496)
T ss_pred eEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccc
Confidence 4666665555544454544444211 112466778889999999998862 2 225444 5
Q ss_pred chHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccc-cCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCcee
Q 018240 62 GTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGIST-IGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTR 138 (359)
Q Consensus 62 gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~ 138 (359)
+++++..++.+++ .+||.|++++|+|..... .+. ..|++++.++.+ +++.+|++.+++.+++.... ..+++
T Consensus 128 a~~al~~l~~~l~-~pGD~Vlv~~P~Y~~~~~---~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~--~~~~k 201 (496)
T PLN02376 128 ATGANETIMFCLA-DPGDVFLIPSPYYAAFDR---DLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQES--NKKVK 201 (496)
T ss_pred hHHHHHHHHHHhC-CCCCEEEECCCCccchHH---HHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhc--CCCee
Confidence 5566667777776 599999999999776543 244 579999999774 45788999998765321000 04788
Q ss_pred EEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhcC-------cc-EE-EEecccc
Q 018240 139 LICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQA-------AD-SA-SVCLSKG 208 (359)
Q Consensus 139 ~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~~-------~d-~~-~~s~~K~ 208 (359)
+|++++ ++||||.+++.+++++|+++|++||++||+||+|....+.. ...+...+... .+ ++ +.|+||.
T Consensus 202 ~l~l~n-P~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~ 280 (496)
T PLN02376 202 GLILTN-PSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKD 280 (496)
T ss_pred EEEEcC-CCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEecccc
Confidence 888854 56699999999999999999999999999999975432211 11233333211 13 33 4599999
Q ss_pred CCCcee--eEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHH------HHhHHHHhhhHHHHHHHHHHHHhcCCC
Q 018240 209 LGAPVG--SVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVAL------QENVLVMLDGDHKKAKLLAEGLNQLKG 279 (359)
Q Consensus 209 ~g~~~g--g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~~~~~~~~~~~l~~~l~~~~g 279 (359)
||.|+- ||+++ ++.+.+.++..... + .. +.+.+.++...+ +.++...++++.++.+.+.+.|++. +
T Consensus 281 ~glpGlRvG~li~~~~~l~~~~~~~~~~-~-~v--s~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-g 355 (496)
T PLN02376 281 MGLPGFRVGIVYSFNDSVVSCARKMSSF-G-LV--SSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-D 355 (496)
T ss_pred CCCCcceEEEEEECCHHHHHHHHHHhhc-C-CC--CHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-C
Confidence 986544 88887 56666655443322 2 12 333344333333 2333334666778888999999987 8
Q ss_pred ceEecCCccceEEEEEeccch-----HHHHHHHHHHH-HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHH
Q 018240 280 LRVDVDAVETNIVYFEITEDS-----KLYAACLLKKL-EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l-~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
+.+. ++.++.++|+.++... ..+..++.+.| .+.||.+.|+. ++++||+++ ..++++++..+++|+
T Consensus 356 i~~~-~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa-~~~~~~l~~al~rl~ 433 (496)
T PLN02376 356 IACL-TSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFA-NMDDDTLHVALGRIQ 433 (496)
T ss_pred Cccc-CCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEee-CCCHHHHHHHHHHHH
Confidence 7764 3567899999986410 01235677777 55799998863 458999996 467899999999999
Q ss_pred HHHHHHH
Q 018240 348 KIYAGVC 354 (359)
Q Consensus 348 ~~~~~~~ 354 (359)
+++.+..
T Consensus 434 ~~l~~~~ 440 (496)
T PLN02376 434 DFVSKNK 440 (496)
T ss_pred HHHHHhh
Confidence 9987544
No 110
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.7e-31 Score=235.04 Aligned_cols=333 Identities=18% Similarity=0.146 Sum_probs=223.6
Q ss_pred ccccccCCCCCChH-HHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhC-----C---C---CeE-EcCCchHHHHHHH
Q 018240 4 RTVDLRSDTVTKPT-EAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMG-----K---E---AGL-FVPSGTMGNLISV 70 (359)
Q Consensus 4 ~~id~~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~-----~---~---~~~-~~~~gt~a~~~~l 70 (359)
..|+|..+.+..+. +.+.+ +.+...+. .|....+..++++++++.+. . + ..+ +++|+++|+..++
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e-~~~~~~~~-~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~ 178 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYE-LVDGIIGD-NYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIF 178 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHH-HHHHHhcC-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHH
Confidence 45788888877666 44555 44434444 48888899999999987431 1 1 134 5555667777777
Q ss_pred HHh----hhhcCCeEEecCCCcceeeccccccccC--CccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEE
Q 018240 71 LVH----CETRGSEVILGDNSHIHIYENGGISTIG--GVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICL 142 (359)
Q Consensus 71 ~~~----~~~~g~~vl~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i 142 (359)
.++ +..+||+|++++|+|..... .+.+. +.+++.++.+ .++.+|.+++++.++ +++++|++
T Consensus 179 ~aL~~~~ll~pGD~Vlv~~P~y~~Y~~---~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~--------~~tkai~l 247 (527)
T PRK09275 179 DSLKENGLLKAGDKIALMTPIFTPYLE---IPELPRYDLEVVHINADEENEWQYPDSELEKLRD--------PSIKALFL 247 (527)
T ss_pred HHHhhhhcCCCCCEEEEeCCChHHHHH---HHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC--------CCCCEEEE
Confidence 752 23699999999999776543 34554 4555556432 357899999999877 78999999
Q ss_pred eccccCCCceecChhhHHHHHHHHHH--cCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee--eEEe
Q 018240 143 ENTHANCGGRCLSVEYTDSVGEIAKK--HGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG--SVIV 218 (359)
Q Consensus 143 ~~~~~~ptG~~~~~~~l~~i~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g--g~~~ 218 (359)
++ ++||||.+++.+++++|+++|++ ++++||+||+|.. +.....+........-+++.|+||.||++++ ||++
T Consensus 248 ~n-P~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~--f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~ 324 (527)
T PRK09275 248 VN-PSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGT--FVDDFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIA 324 (527)
T ss_pred eC-CcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChh--hcccccCHHHhCCCCEEEEeehhhhccCcHhHHhhhh
Confidence 65 56799999999999999999965 4999999999643 2222223222211122444599999998766 8998
Q ss_pred cCHH-----HHHHH--------------------------------HHHHHhhCCCcchhHHHHHH---HHHHH---HHh
Q 018240 219 GSKE-----FIKKA--------------------------------RRLRKTLGGGMRQVGVLCAA---ALVAL---QEN 255 (359)
Q Consensus 219 ~~~~-----~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~---~~~~l---~~~ 255 (359)
++++ +++.+ +.+......+.+.+.+.+.+ ....+ +..
T Consensus 325 ~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~ 404 (527)
T PRK09275 325 LHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAY 404 (527)
T ss_pred cCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHH
Confidence 8765 33222 33334444444433333322 22223 344
Q ss_pred HHHHhhhHHHHHHHHHHHHhcCCCceEe-cCCccceEEEEEeccch--------------HHHHHHHHHHH-HhcCceec
Q 018240 256 VLVMLDGDHKKAKLLAEGLNQLKGLRVD-VDAVETNIVYFEITEDS--------------KLYAACLLKKL-EEHGVLVM 319 (359)
Q Consensus 256 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l-~~~gi~~~ 319 (359)
.+..++.++++++.+.+.| |+.+. .++.++.++|+.++.-. ..+..+|+.+| .+.||.+.
T Consensus 405 ~~~~~~~~~~Rr~~l~~~L----g~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~ 480 (527)
T PRK09275 405 KKAMKDIIRRRYKALYEGL----GLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLL 480 (527)
T ss_pred HHHHHHHHHHHHHHHHHHc----CCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEe
Confidence 5556667778888887777 33331 24567888998876310 01466778888 78899998
Q ss_pred cCC-----CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhhc
Q 018240 320 PES-----STRVRIVVHHQISANDVHYTLSCFQKIYAGVCEEN 357 (359)
Q Consensus 320 ~~~-----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 357 (359)
||. ..++|+++. ..+++++.++.++|.++++++..+.
T Consensus 481 PG~~Fg~~~~~vRis~a-~~~~~~~~~~~~rl~~~l~~y~~~~ 522 (527)
T PRK09275 481 PGGGFGGPEWSVRVSLA-NLNEEDYAKIGKAIRKLLDEYYEEY 522 (527)
T ss_pred CchhhCCCCCeEEEEEe-cCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 874 347999995 4788999999999999999887543
No 111
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.2e-30 Score=228.93 Aligned_cols=311 Identities=20% Similarity=0.205 Sum_probs=217.7
Q ss_pred ccccccCC-CCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCe-EEc-CCchHHH-HHHHHHhhhhcCC
Q 018240 4 RTVDLRSD-TVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAG-LFV-PSGTMGN-LISVLVHCETRGS 79 (359)
Q Consensus 4 ~~id~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-~~~-~~gt~a~-~~~l~~~~~~~g~ 79 (359)
.+|||.++ +...|+|.+.+++.+.......|.. +...++++.++++++.+.. +++ ++|++.. ..++..++ ++|+
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~-~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~~~~-~~gd 112 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELSKIHRYPE-PDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTFI-DPGD 112 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHhhcCCCC-CCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHHHhc-CCCC
Confidence 56899877 4456668888888765443334543 3458999999999998643 444 6776654 45555555 6899
Q ss_pred eEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhH
Q 018240 80 EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYT 159 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l 159 (359)
.|+++.|+|.. +. ..++..|++++.++.+.++.+|++++++.++ +++++++++++ +||||.+++.
T Consensus 113 ~vlv~~p~y~~-~~--~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~--------~~~~~v~~~~p-~nptG~~~~~--- 177 (361)
T PRK00950 113 EVIIPTPTFSY-YE--ISAKAHGAKPVYAKREEDFSLDVDSVLNAIT--------EKTKVIFLCTP-NNPTGNLIPE--- 177 (361)
T ss_pred EEEEcCCChHH-HH--HHHHHcCCEEEEeecCCCCCcCHHHHHHHhc--------cCCCEEEEeCC-CCCCCCCcCH---
Confidence 99999998655 43 2367789999988877777899999999887 67888888655 6699999994
Q ss_pred HHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCcc-EE-EEeccccCCCcee--eEEecCHHHHHHHHHHHHhhC
Q 018240 160 DSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAAD-SA-SVCLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLG 235 (359)
Q Consensus 160 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d-~~-~~s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~ 235 (359)
+++.++|+++|+++|+|++|.... +.+...+....+ ++ +.|+||.+|.|+- ||+++++++++.++.....++
T Consensus 178 ~~l~~l~~~~~~~li~De~y~~~~----~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~ 253 (361)
T PRK00950 178 EDIRKILESTDALVFVDEAYVEFA----EYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLIDYYMRAKTPFS 253 (361)
T ss_pred HHHHHHHHHCCcEEEEECchhhhC----ccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHHHHHHhcCCCC
Confidence 667777888999999999974322 222222222223 44 4599999986542 889999999888776544332
Q ss_pred CCcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHh
Q 018240 236 GGMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEE 313 (359)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 313 (359)
.+...+.++..+++ ++.++..++..++++++.+.|. +.+. +..++++|+.++. .+..++.+.|.+
T Consensus 254 ----~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~--~~~~~~i~~~~~~---~~~~~~~~~l~~ 320 (361)
T PRK00950 254 ----LTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVY--PSEANFVLVDVTP---MTAKEFCEELLK 320 (361)
T ss_pred ----CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeEC--CCcceEEEEECCC---CCHHHHHHHHHH
Confidence 23444445555553 2333344455555566655554 4442 4578899998843 478899999988
Q ss_pred cCceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 314 HGVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 314 ~gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
+||.+.++ ++.++|++++ +.+++++++++|+++++
T Consensus 321 ~gv~v~~~~~f~~~~~~~lRis~~---~~~~~~~l~~~L~~il~ 361 (361)
T PRK00950 321 RGVIVRDCTSFRGLGDYYIRVSIG---TFEENERFLEILKEIVE 361 (361)
T ss_pred CCEEEeeCCccCCCCCCeEEEECC---CHHHHHHHHHHHHHHhC
Confidence 99998664 2458999984 67899999999988753
No 112
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-29 Score=222.96 Aligned_cols=313 Identities=19% Similarity=0.231 Sum_probs=220.0
Q ss_pred ccccccCCCCCC-hHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhCCCC-eEEcCCchHH-HHHHHHHhhhhcC
Q 018240 4 RTVDLRSDTVTK-PTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMGKEA-GLFVPSGTMG-NLISVLVHCETRG 78 (359)
Q Consensus 4 ~~id~~~~~~~~-~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~gt~a-~~~~l~~~~~~~g 78 (359)
..++|.++.+.. +++.+.+++.+.... ...|.. +...++++.++++++.+. .+++++|++. +..++..++ ++|
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~-~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~-~~g 100 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPD-PTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFI-NKG 100 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCC-ccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhc-CCC
Confidence 457788776664 447888888764432 223443 446899999999998753 4666666654 555666665 699
Q ss_pred CeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhh
Q 018240 79 SEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEY 158 (359)
Q Consensus 79 ~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~ 158 (359)
|+|++++|+|.. +. ..++..|++++.++.++++.+|++++++.+++ .++++|++++ ++||||.+++.
T Consensus 101 d~Vlv~~p~y~~-~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~-------~~~k~v~l~~-p~NPtG~~~~~-- 167 (351)
T PRK14807 101 DVVIYPHPSFAM-YS--VYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEK-------YQPKLVFLCN-PNNPTGSVIER-- 167 (351)
T ss_pred CEEEEeCCChHH-HH--HHHHHcCCeEEEeecCCCCCCCHHHHHHHhhc-------cCCCEEEEeC-CCCCCCCCCCH--
Confidence 999999999764 44 34678899999998877788999999999973 4789999965 56799999995
Q ss_pred HHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh-cCccEEE-EeccccCCCcee--eEEecCHHHHHHHHHHHHhh
Q 018240 159 TDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV-QAADSAS-VCLSKGLGAPVG--SVIVGSKEFIKKARRLRKTL 234 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~d~~~-~s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~ 234 (359)
+++.+++++++.++|+||+|.. +. +....+.. ....+++ .|+||.+|.|+. ||+++++++++.++.....+
T Consensus 168 -~~l~~l~~~~~~~~ivDe~y~~--~~--~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~~~ 242 (351)
T PRK14807 168 -EDIIKIIEKSRGIVVVDEAYFE--FY--GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSPY 242 (351)
T ss_pred -HHHHHHHHhCCCEEEEeCcchh--hc--ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHccCCC
Confidence 5555666677788999999632 22 22222221 1223454 499999986543 99999999999887554322
Q ss_pred CCCcchhHHHHHHHHHHHH-HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHh
Q 018240 235 GGGMRQVGVLCAAALVALQ-ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEE 313 (359)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 313 (359)
+. +...+.++...++ ...++.++...++++.+.+.|++++|+.+. +..++++|+.++. .+++.+.|.+
T Consensus 243 --~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~--~~~~~~~~i~~~~-----~~~~~~~l~~ 311 (351)
T PRK14807 243 --NI--NSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIKVY--PSKTNFILVKFKD-----ADYVYQGLLE 311 (351)
T ss_pred --Cc--CHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC--cCCccEEEEEcCC-----HHHHHHHHHH
Confidence 22 3344444444443 233435566777888899999888888763 4468889988863 4678888988
Q ss_pred cCceeccC-----CCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 314 HGVLVMPE-----SSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 314 ~gi~~~~~-----~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
+||.+.+. ...++||++. +.++.+++++.|++++
T Consensus 312 ~gV~v~~~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 312 RGILVRDFSKVEGLEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred CCEEEEECCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 99998553 2468999984 5788899999987753
No 113
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=8e-30 Score=217.14 Aligned_cols=312 Identities=25% Similarity=0.308 Sum_probs=243.6
Q ss_pred HHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccc
Q 018240 18 EAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGI 97 (359)
Q Consensus 18 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~ 97 (359)
++.++++.+...+.. +..++...++|+.+++++|.++++.++|||.|+..+++++..++||+|+++..+|..+.. .
T Consensus 15 ~~e~~~v~~vl~sg~-i~~G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan---~ 90 (374)
T COG0399 15 EEELAAVQEVLKSGW-LTGGPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATAN---A 90 (374)
T ss_pred hHHHHHHHHHHHcCC-eecChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHH---H
Confidence 555555555443333 334899999999999999999999999999999999997766799999999999887765 2
Q ss_pred cccCCccceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEe
Q 018240 98 STIGGVHPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 98 ~~~~g~~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
....|+++++++.+ +++.+|++.++++|+ +++|+|+..|.. |...+ +++|.++|++||++||+|
T Consensus 91 i~~~Ga~PVFvDid~~T~nid~~~ie~aIt--------~~tKAIipVhl~----G~~~d---m~~i~~la~~~~l~vIED 155 (374)
T COG0399 91 VLLVGAKPVFVDIDPDTLNIDPDLIEAAIT--------PRTKAIIPVHLA----GQPCD---MDAIMALAKRHGLPVIED 155 (374)
T ss_pred HHHcCCeEEEEecCCcccCCCHHHHHHHcc--------cCCeEEEEehhc----cCCCC---HHHHHHHHHHcCCeEEEE
Confidence 66789999999887 458999999999999 789999987765 45544 899999999999999999
Q ss_pred cccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEec-CHHHHHHHHHHHHh--------------hCCCcchh
Q 018240 177 GARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVG-SKEFIKKARRLRKT--------------LGGGMRQV 241 (359)
Q Consensus 177 ~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~-~~~~~~~~~~~~~~--------------~~~~~~~~ 241 (359)
.||++|... .|.....+. ++-.+++-.+|.+...-||+++. ++++.++++.++.+ .|.++++.
T Consensus 156 aAqa~Ga~y-~gk~vGt~G-d~~~fSF~~~K~ittgEGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~ 233 (374)
T COG0399 156 AAQAHGATY-KGKKVGSFG-DIGAFSFHATKNLTTGEGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLT 233 (374)
T ss_pred cchhccCee-cCccccccc-ceEEEEecCCCCccccCceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHH
Confidence 999998764 555545442 45577778889998766766555 78888888766653 45667788
Q ss_pred HHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccc---eE-EEEEeccchHHHHHHHHHHHHhcCce
Q 018240 242 GVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVET---NI-VYFEITEDSKLYAACLLKKLEEHGVL 317 (359)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~l~~~gi~ 317 (359)
.+.++.++..|+...+ ..++..+.++++.+.|++++++.+...+... .. ..+.++. .+.+.+.+.+.|+++||.
T Consensus 234 ~iqAAigl~QL~~l~~-~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~-~~~~R~~l~~~L~~~gi~ 311 (374)
T COG0399 234 EIQAAIGLAQLERLDE-INERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDE-EGISRDALMESLKEAGVG 311 (374)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecC-CCCCHHHHHHHHHhCCCC
Confidence 8999999999988776 8888999999999999998776653332222 11 2233443 245788999999998775
Q ss_pred e----ccC-----------------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 318 V----MPE-----------------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 318 ~----~~~-----------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
. .|. ....+++++++.++++++++++++|++++.+
T Consensus 312 ~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 312 AVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred ceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 4 221 1235999999999999999999999988754
No 114
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=1.8e-29 Score=224.80 Aligned_cols=323 Identities=19% Similarity=0.164 Sum_probs=224.6
Q ss_pred ccCCCCCChHHHHHHHHHcCCCCC--------CccCCChHHHHHHH----HHHHHhCCCCeE-EcCCchHHHHHHHHHhh
Q 018240 8 LRSDTVTKPTEAMRAAMASAEVDD--------DVLMHDPTAFRLET----EMAKVMGKEAGL-FVPSGTMGNLISVLVHC 74 (359)
Q Consensus 8 ~~~~~~~~~~~~~~~a~~~~~~~~--------~~~~~~~~~~~l~~----~la~~~~~~~~~-~~~~gt~a~~~~l~~~~ 74 (359)
+.|+|+. +|.+++++....... ..++..+...++|+ .+++++|.+.++ +++||+.|+..++.+++
T Consensus 34 ~~sen~~--~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al~ 111 (416)
T PRK13034 34 IASENFT--SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLALL 111 (416)
T ss_pred cccccCC--CHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHhc
Confidence 4455554 688888887764221 12333678899998 999999999985 46899999999999997
Q ss_pred hhcCCeEEecCCCcceeeccccccccCCccc--eeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018240 75 ETRGSEVILGDNSHIHIYENGGISTIGGVHP--RTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 75 ~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~--~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
++||+|+++...|.+.+..+......+... +.++.+ .++.+|++++++.++. .++++|+++.+. +|
T Consensus 112 -~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-------~~~klVi~~~~~---~g 180 (416)
T PRK13034 112 -KPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKE-------HKPKLIIAGFSA---YP 180 (416)
T ss_pred -CCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhh-------cCCeEEEECCCc---cc
Confidence 599999999999988544342222223222 234332 3466899999999863 357788774322 35
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCH-HHHHHHHHH
Q 018240 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSK-EFIKKARRL 230 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~-~~~~~~~~~ 230 (359)
+..+ +.+|.++|++||+++++|++|++|... .+....++ ..+|++++|+||++++|.||++++++ .+.+.++..
T Consensus 181 ~~~d---l~~l~~la~~~g~~livD~Aha~G~~~-~g~~~~~~-~~~Di~~~s~~K~l~g~~GG~v~~~~~~~~~~~~~~ 255 (416)
T PRK13034 181 RELD---FARFREIADEVGALLMVDMAHIAGLVA-AGEHPNPF-PHAHVVTTTTHKTLRGPRGGMILTNDEEIAKKINSA 255 (416)
T ss_pred cccC---HHHHHHHHHHcCCEEEEeCcccccCcc-cCCCCCCC-CCceEEEEeCcccCCCCCCeEEEECcHHHHHHHHhh
Confidence 6555 899999999999999999999988775 33333333 36899999999999778888777654 444444332
Q ss_pred HHhhCCC-cchhHHHHHHHHHHHHHh----HHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHH
Q 018240 231 RKTLGGG-MRQVGVLCAAALVALQEN----VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAA 305 (359)
Q Consensus 231 ~~~~~~~-~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (359)
.+.+.. ...++.. +++..++.+. ..+++++..++.++|++.|++. |+.+..+...++++++.+.. .+....
T Consensus 256 -~~~~~~~~~~~~~~-aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~v~~~~-~~~~~~ 331 (416)
T PRK13034 256 -VFPGLQGGPLMHVI-AAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLLVDLRP-KGLSGK 331 (416)
T ss_pred -cCCcccCCccHHHH-HHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEEEEcCC-CCCCHH
Confidence 111211 1122233 3333333222 1235678889999999999999 99875333477888888765 234667
Q ss_pred HHHHHHHhcCceecc----------CCCcEEEEEeCC----CCCHHHHHHHHHHHHHHHHH
Q 018240 306 CLLKKLEEHGVLVMP----------ESSTRVRIVVHH----QISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 306 ~~~~~l~~~gi~~~~----------~~~~~lRi~~~~----~~~~~~i~~~~~~l~~~~~~ 352 (359)
.+.+.|+++||.+.. ..+..+|++++. .++++|++++++.|++++.+
T Consensus 332 ~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 332 DAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred HHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence 787899999998842 234579999877 78899999999999988874
No 115
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.98 E-value=4.2e-30 Score=226.96 Aligned_cols=309 Identities=19% Similarity=0.183 Sum_probs=216.4
Q ss_pred ccccccCCCCCChH-HHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHh----CCC----CeEEcCCchHHHHHHH-HHh
Q 018240 4 RTVDLRSDTVTKPT-EAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVM----GKE----AGLFVPSGTMGNLISV-LVH 73 (359)
Q Consensus 4 ~~id~~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~~----~~~~~~~gt~a~~~~l-~~~ 73 (359)
..+||+.+++..|. +.+.+++.+.. ....|....+..++++.+++++ |.+ ..+++++|++..+..+ ..+
T Consensus 28 ~~i~l~~~~p~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l 106 (364)
T PRK07865 28 GIVDLSVGTPVDPVPPVIQEALAAAA-DAPGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLL 106 (364)
T ss_pred CEEEcCCCCCCCCCCHHHHHHHHHHH-hhCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHH
Confidence 46899998776554 77778876643 2345777777889999999987 432 2466777665555444 444
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee
Q 018240 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC 153 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~ 153 (359)
..++|+.|++++|+|..... .+...|++++.++ +.++ +.. .++++|+++ +++||||.+
T Consensus 107 ~~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~-------~~~~----l~~-------~~~~~v~~~-~p~NPtG~~ 164 (364)
T PRK07865 107 GLGPGDVVVIPELAYPTYEV---GARLAGATVVRAD-------SLTE----LGP-------QRPALIWLN-SPSNPTGRV 164 (364)
T ss_pred cCCCCCEEEECCCCcccHHH---HHHhcCCEEEecC-------Chhh----CCc-------ccceEEEEc-CCCCCCCcc
Confidence 13699999999999866443 3677888887773 2222 221 467899986 466799999
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhc-----C-cc-EEEEeccccCCCcee--eEEecCHHHH
Q 018240 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQ-----A-AD-SASVCLSKGLGAPVG--SVIVGSKEFI 224 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-----~-~d-~~~~s~~K~~g~~~g--g~~~~~~~~~ 224 (359)
++.+++++|.++|+++|++||+||+|..... .+.....+.. . .. +++.|+||.||.|+. ||++++++++
T Consensus 165 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~ 242 (364)
T PRK07865 165 LGVDHLRKVVAWARERGAVVASDECYLELGW--DAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALV 242 (364)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecchhhhcc--CCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHHHH
Confidence 9999999999999999999999999754222 2211111110 1 12 444599999976543 8999999999
Q ss_pred HHHHHHHHhhCCCcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHH
Q 018240 225 KKARRLRKTLGGGMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKL 302 (359)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 302 (359)
+.++......+.+. +...+.++...++ ...++.++.+.++++.+.+.|++. |+.+.. +..+.++|+.+..
T Consensus 243 ~~~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~~---- 314 (364)
T PRK07865 243 AELLEVRKHAGMMV--PAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA-GFRVDH-SEAGLYLWATRGE---- 314 (364)
T ss_pred HHHHHHHHhcCCCc--CHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccC-CCccEEEEEeCCC----
Confidence 99887665555444 3344444444453 344446667788899999999987 877643 4466678888754
Q ss_pred HHHHHHHHHHhcCceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHH
Q 018240 303 YAACLLKKLEEHGVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
+..++.+.|.++||.+.|+ ...++||+++ .+++++++++++|+
T Consensus 315 ~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~~~~~~~~l~ 363 (364)
T PRK07865 315 DCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALT--ATDERIAAAVERLA 363 (364)
T ss_pred CHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEec--CCHHHHHHHHHHhh
Confidence 4567788899999999764 2468999996 46899999998874
No 116
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.98 E-value=1e-29 Score=220.13 Aligned_cols=335 Identities=19% Similarity=0.242 Sum_probs=249.9
Q ss_pred cccccCCCCCChHHHHHHH-HHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEe
Q 018240 5 TVDLRSDTVTKPTEAMRAA-MASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVIL 83 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a-~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~ 83 (359)
+|||.||+.+ +++.++ +.....++..|+.++...+||+.+++++|.++++.++||+.|+..+. .+..++||.|
T Consensus 40 ~iDLltDsgT---~aMs~~q~a~~~~GDe~yag~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~-~l~l~pGDeV-- 113 (450)
T TIGR02618 40 YIDLLTDSGT---NAMSDKQWAGLMMGDEAYAGSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLS-QIAIKPGDYV-- 113 (450)
T ss_pred EEEcccCCCc---HHHHHHHHHHhhhcchhhcCCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHH-HhCCCCcCEE--
Confidence 5899999888 555555 55555577789999999999999999999999999999999987654 4444699976
Q ss_pred cCCCcceeeccccccccCCccceeeec----------CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee
Q 018240 84 GDNSHIHIYENGGISTIGGVHPRTVKN----------NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC 153 (359)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~~v~~----------~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~ 153 (359)
+.++|+.... +.....|+.++.++. +.+|.+|+++|++.++... ..++++|.++++.|..+|.+
T Consensus 114 psn~~f~Tt~--ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~----~~~~~lV~~e~t~N~~GG~p 187 (450)
T TIGR02618 114 PGNMYFTTTR--YHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVG----ADKIPYICLAVTVNLAGGQP 187 (450)
T ss_pred CCceeHHHHH--HHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc----CcccCceEEEEecccCCCee
Confidence 6788777766 335667775555532 3468899999999998411 12456778878888778999
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccch-hh-------hcCchh----HhhhcCccEEEEeccccCCCceeeEEe-cC
Q 018240 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNA-AV-------ALGVPV----RRLVQAADSASVCLSKGLGAPVGSVIV-GS 220 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~-~~-------~~~~~~----~~~~~~~d~~~~s~~K~~g~~~gg~~~-~~ 220 (359)
+|.++++++.++|++||+.+|.|+|+.++. .. +.+.+. .++...+|.+++|.+|.++.|.||+++ .+
T Consensus 188 vs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~~d 267 (450)
T TIGR02618 188 VSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCMND 267 (450)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEeCC
Confidence 999999999999999999999999998843 22 345555 344568999999999999999998888 68
Q ss_pred HHHHHHHHHHHHhhCCCcchhHHHHHHH----HHHHHHhHH-HHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEE
Q 018240 221 KEFIKKARRLRKTLGGGMRQVGVLCAAA----LVALQENVL-VMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFE 295 (359)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~ 295 (359)
+++.++++.....++ ++.+.+.++... ..++++..+ ...+....+.++|.+.|.+. |+.+.. |.+++.+++.
T Consensus 268 ~~l~~k~r~~~~~~e-G~~tyGgla~r~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~-Gvpv~~-p~ggh~V~vd 344 (450)
T TIGR02618 268 DEMFQSAKELVVVFE-GMPSYGGLAGRDMEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAA-GVPIVE-PVGGHAVFLD 344 (450)
T ss_pred HHHHHHHHHHhhhcC-CccccCchhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHC-CCcccC-CCCcceEEEE
Confidence 999999988876663 333333333323 345555444 34444556799999999999 998843 5688888886
Q ss_pred ecc------chHHHHHHHHHHH-HhcCceeccC-----------------CCcEEEEEe-CCCCCHHHHHHHHHHHHHHH
Q 018240 296 ITE------DSKLYAACLLKKL-EEHGVLVMPE-----------------SSTRVRIVV-HHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 296 ~~~------~~~~~~~~~~~~l-~~~gi~~~~~-----------------~~~~lRi~~-~~~~~~~~i~~~~~~l~~~~ 350 (359)
... .....+..+..+| .+.||..+.- .-..+|+.+ .-..|.++++.+++++..+.
T Consensus 345 a~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~ 424 (450)
T TIGR02618 345 ARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLY 424 (450)
T ss_pred hHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHH
Confidence 532 1234677888888 8888876321 024589874 33468899999999999888
Q ss_pred HHHH
Q 018240 351 AGVC 354 (359)
Q Consensus 351 ~~~~ 354 (359)
++-.
T Consensus 425 ~~~~ 428 (450)
T TIGR02618 425 KHRD 428 (450)
T ss_pred hhHh
Confidence 7654
No 117
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.98 E-value=8.4e-30 Score=224.84 Aligned_cols=322 Identities=22% Similarity=0.240 Sum_probs=230.3
Q ss_pred ccccCCCCCC-hHHHHHHHHHc--CCCCCCccCCChHHHHHHHHHHHHhCCC--------CeEEcCCchHHHHHHHHHhh
Q 018240 6 VDLRSDTVTK-PTEAMRAAMAS--AEVDDDVLMHDPTAFRLETEMAKVMGKE--------AGLFVPSGTMGNLISVLVHC 74 (359)
Q Consensus 6 id~~~~~~~~-~~~~~~~a~~~--~~~~~~~~~~~~~~~~l~~~la~~~~~~--------~~~~~~~gt~a~~~~l~~~~ 74 (359)
|||..+.+.. ++|.+..++.+ .......|...+...++++.++++++.. ..++++||++++..++..+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~ 80 (350)
T cd00609 1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL 80 (350)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC
Confidence 4666665543 33666666653 2223445677788899999999998754 24677778888888888887
Q ss_pred hhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCH--HHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018240 75 ETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDI--DLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 75 ~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~--~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
++|++|+++.++|.+... .++..|.+++.++.++++..+. +.++...+ +++++|++++ ++||||.
T Consensus 81 -~~g~~vl~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--------~~~~~v~i~~-~~~~tG~ 147 (350)
T cd00609 81 -NPGDEVLVPDPTYPGYEA---AARLAGAEVVPVPLDEEGGFLLDLELLEAAKT--------PKTKLLYLNN-PNNPTGA 147 (350)
T ss_pred -CCCCEEEEcCCCchhHHH---HHHHCCCEEEEEecccccCCccCHHHHHhhcC--------ccceEEEEEC-CCCCCCc
Confidence 589999999999988665 3677788998898877766554 55665554 7899999977 7779999
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEeccccCCC-cee-eEEecCH-HHHHHH
Q 018240 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSKGLGA-PVG-SVIVGSK-EFIKKA 227 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~g~-~~g-g~~~~~~-~~~~~~ 227 (359)
.+|.+++.+|.++|+++|+++|+|++|+.+........ ......+.|+++.|++|+++. +.+ |+++.++ ++.+.+
T Consensus 148 ~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~ 227 (350)
T cd00609 148 VLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERL 227 (350)
T ss_pred ccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHH
Confidence 99999999999999999999999999765443211111 111112456777899999973 333 8888887 788888
Q ss_pred HHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHH
Q 018240 228 RRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYA 304 (359)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (359)
+........+. +...+.+....++ +..+...++..++++++.+.|++.+...+ ..+..+.++|+.++.. .+.
T Consensus 228 ~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~g~~~~~~~~~~--~~~ 302 (350)
T cd00609 228 KKLLPYTTSGP--STLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVV-VKPSGGFFLWLDLPEG--DDE 302 (350)
T ss_pred HHHHHhcccCC--ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-cCCCccEEEEEecCCC--ChH
Confidence 76655543333 2233333444443 23444666788899999999999844443 2345788889888762 245
Q ss_pred HHHHHHHHhcCceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHH
Q 018240 305 ACLLKKLEEHGVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 305 ~~~~~~l~~~gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
..+.+.|.++||.+.++ +..++|++++.. ++|+++++++|+
T Consensus 303 ~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 303 EFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred HHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 56777778899999776 567899999744 999999999886
No 118
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.98 E-value=1.3e-29 Score=223.56 Aligned_cols=317 Identities=17% Similarity=0.261 Sum_probs=222.1
Q ss_pred HHHHHHHHcCCCCCC---------ccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCc
Q 018240 18 EAMRAAMASAEVDDD---------VLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSH 88 (359)
Q Consensus 18 ~~~~~a~~~~~~~~~---------~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~ 88 (359)
|++.+++.+.-.+.. ....++...++++.+++++|.+..++++||++++..++..++ ++|++|++++++|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~-~~gd~Vl~~~~~~ 93 (361)
T cd06452 15 PEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLC-EKGDWVVVDGLAH 93 (361)
T ss_pred HHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCcc
Confidence 888888877542211 112246788999999999999777888888889998888887 5999999999999
Q ss_pred ceeeccccccccCCccceeeecCCC--CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHH
Q 018240 89 IHIYENGGISTIGGVHPRTVKNNQD--GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIA 166 (359)
Q Consensus 89 ~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~ 166 (359)
++.+. . +...|++++.++.+.+ +.+|++++++.+++..+. ..+++++|+++++ +||||...+ +++|.++|
T Consensus 94 ~~~~~-~--~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~-~~~~~~lv~l~~p-~n~tG~~~~---~~~i~~~~ 165 (361)
T cd06452 94 YTSYV-A--AERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDE-FGKPPALALLTHV-DGNYGNLHD---AKKIAKVC 165 (361)
T ss_pred hHHHH-H--HHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhc-cCCCceEEEEECC-CCCCeeecc---HHHHHHHH
Confidence 98875 2 6778999999977654 488999999988631100 0036889999665 569998765 89999999
Q ss_pred HHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHHhh--------CCC
Q 018240 167 KKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRKTL--------GGG 237 (359)
Q Consensus 167 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~--------~~~ 237 (359)
+++|+++|+|++|+++... .....+ +.|+++.|+||++++|.+ |+++++++++++++.....+ +.+
T Consensus 166 ~~~~~~vivD~a~~~g~~~---~~~~~~--~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 240 (361)
T cd06452 166 HEYGVPLLLNGAYTVGRMP---VSGKEL--GADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQMFKIKEVELLGCT 240 (361)
T ss_pred HHcCCeEEEECCcccCCcC---CCHHHc--CCCEEEecCCccccCCCCeEEEEECHHHHHHHhccccccccceeeeeccc
Confidence 9999999999998765432 222222 689999999999986655 88999999888876544321 122
Q ss_pred cchhHHHHHH-HHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEec-CCccceEEEEEeccch------HHHHHHHHH
Q 018240 238 MRQVGVLCAA-ALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDV-DAVETNIVYFEITEDS------KLYAACLLK 309 (359)
Q Consensus 238 ~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~ 309 (359)
....+..... ++..+.+..+ ...+..++++++++.|+++||+++.. .+...+++.+..+.-. ...+.++.+
T Consensus 241 ~~~~~~~~~~~al~~~~~~~~-~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (361)
T cd06452 241 LRGAPLVTLMASFPHVKERVK-RWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYS 319 (361)
T ss_pred cCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHH
Confidence 2111121111 1222223333 34444556789999999998998753 2345667766654200 012346999
Q ss_pred HHHhcCceecc-CCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 310 KLEEHGVLVMP-ESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 310 ~l~~~gi~~~~-~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
+|.++||.+.. +...++|++.. ..++++++.++++|+++.
T Consensus 320 ~L~~~gI~~~~~~~~~~~ri~~~-g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 320 ELKKRGIHGIKPGLTRYFKLSTY-GLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred HHHHcCceEEcCCCceEEEEEec-CCCHHHHHHHHHHHHHHh
Confidence 99889999743 34457888874 579999999999998664
No 119
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.98 E-value=6e-30 Score=225.37 Aligned_cols=312 Identities=18% Similarity=0.168 Sum_probs=216.8
Q ss_pred ccccccCC-CCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC-eEEcCCch-HHHHHHHHHhhhhcCCe
Q 018240 4 RTVDLRSD-TVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA-GLFVPSGT-MGNLISVLVHCETRGSE 80 (359)
Q Consensus 4 ~~id~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~gt-~a~~~~l~~~~~~~g~~ 80 (359)
..|||..+ +...|+|.+.+++.+.......|. .++..++++.++++++.+. .+++++|+ +++..++.+++ ++||.
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~~~-~~gd~ 108 (357)
T PRK14809 31 DLVKLSSNENPHGPSPAAVEAIREAAERVHSYP-KASHADLTAALADRWDVSPEQVWLANGGDGALDYLARAML-DPGDT 108 (357)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhcCC-CCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhc-CCCCE
Confidence 46889887 444666888888877543334454 3567899999999998764 35555555 56666666666 69999
Q ss_pred EEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhh
Q 018240 81 VILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEY 158 (359)
Q Consensus 81 vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~ 158 (359)
|++++|+|.. +. ......|..++.++.+ +++.++.+++.+..+ ++++|+++ .+|||||.+++.++
T Consensus 109 V~v~~P~y~~-~~--~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~---------~~k~i~l~-~p~NPTG~~~s~~~ 175 (357)
T PRK14809 109 VLVPDPGFAY-YG--MSARYHHGEVREYPVSKADDFEQTADTVLDAYD---------GERIVYLT-SPHNPTGSEIPLDE 175 (357)
T ss_pred EEEeCCChHH-HH--HHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc---------CCcEEEEe-CCCCCCCcCCCHHH
Confidence 9999999654 33 2356677788877654 345667777666543 46788886 56679999999999
Q ss_pred HHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEE-eccccCCCcee--eEEecCHHHHHHHHHHHHhhC
Q 018240 159 TDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASV-CLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLG 235 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~-s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~ 235 (359)
+.+++++|++ +++||+||+|..... .+.....+.....++++ |+||.||.|+. ||+++++++++.+......
T Consensus 176 ~~~l~~~~~~-~~~iI~De~y~~~~~--~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~-- 250 (357)
T PRK14809 176 VEALAERTDE-ETLVVVDEAYGEFAE--RPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYARVNTP-- 250 (357)
T ss_pred HHHHHHhCcc-CcEEEEechhhhccC--CchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHHHHHHHhCCC--
Confidence 9999998875 789999999654322 22112222212235554 99999986544 9999999998887765322
Q ss_pred CCcchhHHHHHHHHHHH--HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHh
Q 018240 236 GGMRQVGVLCAAALVAL--QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEE 313 (359)
Q Consensus 236 ~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 313 (359)
...+...+.++...+ ..+.++.++.+.++++.+.+.|... . . +..++++|+.++ +..++.+.|.+
T Consensus 251 --~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-~---~--~~~g~f~~~~~~-----~~~~~~~~l~~ 317 (357)
T PRK14809 251 --FAASELACRAGLAALDDDEHVERTVETARWAREYIREELDAP-T---W--ESAGNFVLAEVG-----DASAVAEAAQE 317 (357)
T ss_pred --CCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCc-c---C--CCCCCEEEEECC-----CHHHHHHHHHH
Confidence 222344445555555 3444445556667777788887653 2 1 357889999874 35678888999
Q ss_pred cCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 314 HGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 314 ~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
+||.+.++. .+++|+++. +.+++++++++|+++++
T Consensus 318 ~gv~v~~g~~f~~~~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 318 RGVIVRDCTSFGLPECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred CCEEEEECccCCCCCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 999997764 457999984 47899999999998764
No 120
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.98 E-value=4.7e-30 Score=228.11 Aligned_cols=327 Identities=18% Similarity=0.214 Sum_probs=224.5
Q ss_pred ccccCCCCCChHHHHHHHHHcCCCCC----C-ccCC----ChHHHHHHHHHHHHhCCCC--eEEcCCchHHHHHHHHHhh
Q 018240 6 VDLRSDTVTKPTEAMRAAMASAEVDD----D-VLMH----DPTAFRLETEMAKVMGKEA--GLFVPSGTMGNLISVLVHC 74 (359)
Q Consensus 6 id~~~~~~~~~~~~~~~a~~~~~~~~----~-~~~~----~~~~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l~~~~ 74 (359)
+.|++...+.+++.+.+++.+..... . .+.. .....++++.+++++|.+. .++++|||+++..++..+.
T Consensus 1 ~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~ 80 (379)
T TIGR03402 1 IYLDNNATTRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSAL 80 (379)
T ss_pred CcCCCcCCCCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHH
Confidence 35666666666678888887643211 1 1111 2335788899999999874 4777889999998888764
Q ss_pred h--hcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018240 75 E--TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 75 ~--~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
. .+++.|+++..+|.+........+..|.+++.++.+.++.+|++++++.++ +++++++++++ +||||.
T Consensus 81 ~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~--------~~~~lv~i~~~-~n~tG~ 151 (379)
T TIGR03402 81 AAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAIT--------DDTALVSVMWA-NNETGT 151 (379)
T ss_pred HhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcC--------CCcEEEEEEcc-cCCeee
Confidence 2 356789999989877543111233468899988877788899999999998 67889988665 459999
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHH
Q 018240 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLR 231 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~ 231 (359)
..| +++|.++|+++|+++++|++|++|... ..... .++|++++|.||. ++|.| |+++.+++.. +....
T Consensus 152 ~~~---~~~I~~l~~~~g~~vivD~~~~~g~~~---~~~~~--~~~D~~~~s~~K~-~gp~G~g~l~v~~~~~--~~p~~ 220 (379)
T TIGR03402 152 IFP---IEEIGEIAKERGALFHTDAVQAVGKIP---IDLKE--MNIDMLSLSGHKL-HGPKGVGALYIRKGTR--FRPLL 220 (379)
T ss_pred ccc---HHHHHHHHHHcCCEEEEECcccccccc---cCccc--CCCCEEEEcHHHc-CCCCceEEEEECCCCC--CCCcc
Confidence 998 688999999999999999998765432 22222 3789999999995 45777 8777765431 11000
Q ss_pred -------HhhCCCcchhHHHHHH-HHHHHHHhHHHHhhhHHHHHHHHHHHHhc-CCCceEecCCc-c-ceEEEEEeccch
Q 018240 232 -------KTLGGGMRQVGVLCAA-ALVALQENVLVMLDGDHKKAKLLAEGLNQ-LKGLRVDVDAV-E-TNIVYFEITEDS 300 (359)
Q Consensus 232 -------~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~-~-~~~~~~~~~~~~ 300 (359)
....++.....+.+.. +...+....+...++..++++++.+.|++ +|++.+..++. . ...+.+.++.
T Consensus 221 ~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 298 (379)
T TIGR03402 221 RGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEY-- 298 (379)
T ss_pred cCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecC--
Confidence 0011122222222111 12222334444556777888899999986 88888754322 1 2345555554
Q ss_pred HHHHHHHHHHHHhcCceeccCC-----------------------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 301 KLYAACLLKKLEEHGVLVMPES-----------------------STRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 301 ~~~~~~~~~~l~~~gi~~~~~~-----------------------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
.+..++.+.|.++||.+..+. .+.+|++++..++++|++++++.|+++++++.+
T Consensus 299 -~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 299 -IEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRA 375 (379)
T ss_pred -CCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356789999999999986542 357999999999999999999999999887653
No 121
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.98 E-value=1.3e-29 Score=223.98 Aligned_cols=312 Identities=18% Similarity=0.131 Sum_probs=224.5
Q ss_pred cCCCCCChHHHHHHHHHcCCCCCCccC--CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCC
Q 018240 9 RSDTVTKPTEAMRAAMASAEVDDDVLM--HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDN 86 (359)
Q Consensus 9 ~~~~~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~ 86 (359)
.++++.++..+..+++.+.......|+ ..|...+|++.+++++|.+.+++++||+.|+..++.+++ ++||+|+++.+
T Consensus 30 ~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~G~~~al~~~sG~~Ai~~~l~al~-~~Gd~Vv~~~~ 108 (386)
T PRK06767 30 QTSTFTFETAQQGEASFAGVDPSYIYSRLGNPTVKLFEERMAVLEGGEEALAFGSGMAAISATLIGFL-KAGDHIICSNG 108 (386)
T ss_pred CccceecCCHHHHHHhhccCcCCccccCCCCcchHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEcCC
Confidence 344555566555555544332344455 467789999999999999999999999999988888887 69999999999
Q ss_pred Ccceeeccc-cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHH
Q 018240 87 SHIHIYENG-GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEI 165 (359)
Q Consensus 87 ~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~ 165 (359)
.|.+.+... ......|+++..++. .|++++++.++ +++++|++++++| |||.+.+ +++|.++
T Consensus 109 ~y~~~~~~~~~~~~~~gi~~~~~~~-----~d~~~l~~~i~--------~~tklV~lesp~N-ptG~v~d---l~~I~~l 171 (386)
T PRK06767 109 LYGCTYGFLEVLEEKFMITHSFCDM-----ETEADIENKIR--------PNTKLIFVETPIN-PTMKLID---LKQVIRV 171 (386)
T ss_pred cHHHHHHHHHHHHhhcCeEEEEeCC-----CCHHHHHHhhC--------cCceEEEEeCCCC-CCceecC---HHHHHHH
Confidence 887665310 112234544444433 28899999988 7899999976655 9999988 7999999
Q ss_pred HHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCce---eeEEecCHHHHHHHH-HHHHhhCCCcchh
Q 018240 166 AKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV---GSVIVGSKEFIKKAR-RLRKTLGGGMRQV 241 (359)
Q Consensus 166 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~---gg~~~~~~~~~~~~~-~~~~~~~~~~~~~ 241 (359)
|+++|+++|+|++|+.+.. .. ++..++|+++.|++|+++++. ||+++++++.++++. ......+..+ +
T Consensus 172 a~~~g~~vivD~a~a~~~~---~~---pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~--~ 243 (386)
T PRK06767 172 AKRNGLLVIVDNTFCSPYL---QR---PLELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIM--A 243 (386)
T ss_pred HHHcCCEEEEECCCccccc---CC---chhcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCC--C
Confidence 9999999999999643221 22 233478999999999997754 688999888777653 4444455544 4
Q ss_pred HHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceE-ecC---------CccceEEEEEeccchHHHHHHHHHHH
Q 018240 242 GVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRV-DVD---------AVETNIVYFEITEDSKLYAACLLKKL 311 (359)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~-~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (359)
+..++++..+++.... ++++..+++.++.+.|+++|+++. ..| +..+.++.|.++. ...+..+|.+.|
T Consensus 244 ~~~a~l~~~~L~tl~~-r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~-~~~~~~~f~~~l 321 (386)
T PRK06767 244 PFDAWLLLRGLKTLAV-RMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKG-GKEETQAFINDL 321 (386)
T ss_pred HHHHHHHHcCCCcHHH-HHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcC-CHHHHHHHHHhC
Confidence 5556666666665544 788899999999999999999874 322 2346778888864 234678899999
Q ss_pred HhcCceeccC---------------------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 312 EEHGVLVMPE---------------------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 312 ~~~gi~~~~~---------------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
+..++.+.-| ..+.+|+++. + |+.+.+++-|.++++.
T Consensus 322 ~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svG--l--E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 322 HFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVG--L--ESWEDIVSDLEQALKK 385 (386)
T ss_pred CccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEec--c--CCHHHHHHHHHHHHhh
Confidence 8777655222 2346999985 3 5788888888887764
No 122
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.98 E-value=7e-30 Score=228.63 Aligned_cols=320 Identities=17% Similarity=0.184 Sum_probs=222.4
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCCC-----CccCCC----hHHHHHHHHHHHHhCCCC--eEEcCCchHHHHHHHHHh
Q 018240 5 TVDLRSDTVTKPTEAMRAAMASAEVDD-----DVLMHD----PTAFRLETEMAKVMGKEA--GLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~~-----~~~~~~----~~~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l~~~ 73 (359)
.++|.+.....+++.+++++.+..... ..|... +...++++.+++++|.+. .++++|+++++..++.++
T Consensus 18 ~~yl~~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~ 97 (397)
T TIGR01976 18 RVFFDNPAGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAI 97 (397)
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHH
Confidence 578888888878888888887643211 123222 345799999999999864 355566666665555554
Q ss_pred --hhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCC-CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC
Q 018240 74 --CETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQ-DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC 149 (359)
Q Consensus 74 --~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p 149 (359)
..++|++|+++++.|++.+... ..++..|++++.++.+. ++.+|++++++.++ +++++|+++++.| |
T Consensus 98 ~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~--------~~~~lv~i~~~~n-~ 168 (397)
T TIGR01976 98 SRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLS--------PRTRLVAVTAASN-T 168 (397)
T ss_pred HhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcC--------CCceEEEEeCCCC-C
Confidence 2358999999999998765311 12466798999887764 67899999999998 6789999966554 9
Q ss_pred CceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHH
Q 018240 150 GGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARR 229 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~ 229 (359)
||...+ +++|.++|+++|+++++|++|..+.. ...... .++|++++|+||++|.+ .|+++.++++++.+..
T Consensus 169 tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~---~~~~~~--~~~d~~~~s~~K~~g~~-~G~l~~~~~~~~~l~~ 239 (397)
T TIGR01976 169 LGSIVD---LAAITELVHAAGALVVVDAVHYAPHG---LIDVQA--TGADFLTCSAYKFFGPH-MGILWGRPELLMNLPP 239 (397)
T ss_pred CCccCC---HHHHHHHHHHcCCEEEEehhhhcccc---CCCHHH--cCCCEEEEechhhcCCc-eEEEEEcHHHHhhCCC
Confidence 999887 89999999999999999999854321 122222 37899999999999854 6778888888777553
Q ss_pred HHHhhC---------CCcchhHHHHHHHHHHHHHh------------------HHHHhhhHHHHHHHHHHHHhcCCCceE
Q 018240 230 LRKTLG---------GGMRQVGVLCAAALVALQEN------------------VLVMLDGDHKKAKLLAEGLNQLKGLRV 282 (359)
Q Consensus 230 ~~~~~~---------~~~~~~~~~~~~~~~~l~~~------------------~~~~~~~~~~~~~~l~~~l~~~~g~~~ 282 (359)
....+. .++. +....++...+++.. .+...++..+.++++++.|++++++++
T Consensus 240 ~~~~~~~~~~~~~~~~gt~-~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~ 318 (397)
T TIGR01976 240 YKLTFSYDTGPERFELGTP-QYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTL 318 (397)
T ss_pred ccccCccCCCcchhcCCCC-CHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 322111 1111 111112222222211 222445556778889999998867887
Q ss_pred ecC---CccceEEEEEeccchHHHHHHHHHHHHhcCceeccC---------------CCcEEEEEeCCCCCHHHHHHHHH
Q 018240 283 DVD---AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE---------------SSTRVRIVVHHQISANDVHYTLS 344 (359)
Q Consensus 283 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~---------------~~~~lRi~~~~~~~~~~i~~~~~ 344 (359)
..+ ...++++.+.++. .+..++.++|.++||.+..+ ...++|++++..++++|++++++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~---~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~ 395 (397)
T TIGR01976 319 YGVARLAARVPTVSFTVHG---LPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLE 395 (397)
T ss_pred eCCCCccCCCceEEEEeCC---cCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHH
Confidence 543 2356777777654 36778999999999998644 24579999999999999999998
Q ss_pred HH
Q 018240 345 CF 346 (359)
Q Consensus 345 ~l 346 (359)
.|
T Consensus 396 ~l 397 (397)
T TIGR01976 396 AL 397 (397)
T ss_pred hC
Confidence 64
No 123
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.97 E-value=8.9e-30 Score=227.44 Aligned_cols=323 Identities=15% Similarity=0.112 Sum_probs=218.2
Q ss_pred cccccccCCCC---CCh---HHHHHHHHHcCCC--CCCccCCChHHHHHHHHHHHHhCCCC-------eEE---cCCchH
Q 018240 3 TRTVDLRSDTV---TKP---TEAMRAAMASAEV--DDDVLMHDPTAFRLETEMAKVMGKEA-------GLF---VPSGTM 64 (359)
Q Consensus 3 ~~~id~~~~~~---~~~---~~~~~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~~~~~-------~~~---~~~gt~ 64 (359)
+..|||+.+.+ ..| .+.+.+++.+... ....|+...+..++|+++++++.... .++ +.+|++
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~ 108 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTG 108 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcch
Confidence 45688888763 221 2556666544322 23468888899999999999873221 243 666667
Q ss_pred HHHHHHH---HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeE
Q 018240 65 GNLISVL---VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRL 139 (359)
Q Consensus 65 a~~~~l~---~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 139 (359)
|+..++. .++ ++||.|++++|+|.... ..++..|++++.++.. +++.+|++.+++.+++.. +++++
T Consensus 109 al~~~~~~l~~~~-~~Gd~Vlv~~P~y~~~~---~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~-----~~~~~ 179 (404)
T PTZ00376 109 ALRLGFEFLKRFL-PAGTTVYVSNPTWPNHV---NIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAP-----NGSVV 179 (404)
T ss_pred HHHHHHHHHHHhc-CCCCEEEEcCCCchhHH---HHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCC-----CCCEE
Confidence 7666654 344 69999999999977654 3488899999999862 457899999999986420 23455
Q ss_pred EEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh---cCchhHhhhcCc-cEEE-EeccccCCCcee
Q 018240 140 ICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA---LGVPVRRLVQAA-DSAS-VCLSKGLGAPVG 214 (359)
Q Consensus 140 v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~---~~~~~~~~~~~~-d~~~-~s~~K~~g~~~g 214 (359)
+++ +++|||||.+++.+++++|.++|++||++||+||+|....... ...+...+.... .+++ .|+||.|+.++.
T Consensus 180 ~~~-~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~Gl 258 (404)
T PTZ00376 180 LLH-ACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGE 258 (404)
T ss_pred EEe-CCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCccccccc
Confidence 555 7778899999999999999999999999999999964322210 011222222222 3554 499999996544
Q ss_pred --eEE---ecCHHHHHHHH-HHH---HhhCCCcchhHHHHHHHHHHHHH------h---HHHHhhhHHHHHHHHHHHHhc
Q 018240 215 --SVI---VGSKEFIKKAR-RLR---KTLGGGMRQVGVLCAAALVALQE------N---VLVMLDGDHKKAKLLAEGLNQ 276 (359)
Q Consensus 215 --g~~---~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~l~~------~---~~~~~~~~~~~~~~l~~~l~~ 276 (359)
||+ +.++++.+.+. .+. .....+. +.+.+.++...+++ + .++.++++.++++.+.+.|++
T Consensus 259 RvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 336 (404)
T PTZ00376 259 RIGALHIVCANKEEAANVLSQLKLIIRPMYSSP--PIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKA 336 (404)
T ss_pred ccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCC--chHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 776 57887665543 222 2211221 23344444444421 1 223455677889999999998
Q ss_pred CCC----ceEecCCccceEEEEEeccchHHHHHHHHHHH-HhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 277 LKG----LRVDVDAVETNIVYFEITEDSKLYAACLLKKL-EEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 277 ~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
. + +.+. .+.++.++|+.++. +++++| .++||.+.|++ |++++ ..+.++++.++++|++++.
T Consensus 337 ~-~~~~~~~~~-~p~gg~f~~~~~~~-------~~~~~L~~~~~v~v~p~~----Ris~~-~~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 337 L-GSPGDWEHI-INQIGMFSFTGLTK-------EQVERLIEKYHIYLLDNG----RISVA-GLTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred c-CCCCccccc-ccCceEEEecCCCH-------HHHHHHHHhCCEeecCCC----eEEEe-ccCHHhHHHHHHHHHHHHh
Confidence 7 4 3332 35678889988753 677788 56699998884 99995 4899999999999998865
No 124
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.8e-29 Score=223.30 Aligned_cols=315 Identities=18% Similarity=0.183 Sum_probs=216.0
Q ss_pred cccccCCCCC-ChHHHHHHHHHcCCC----CCCccCCChHHHHHHHHHHHHh----CC--C-CeEEcCCchH-HHHHHHH
Q 018240 5 TVDLRSDTVT-KPTEAMRAAMASAEV----DDDVLMHDPTAFRLETEMAKVM----GK--E-AGLFVPSGTM-GNLISVL 71 (359)
Q Consensus 5 ~id~~~~~~~-~~~~~~~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~----~~--~-~~~~~~~gt~-a~~~~l~ 71 (359)
.+||+.+.+. .|++.+.+++.+... ....|. .++...+++.+++++ |. + ..+++++|++ ++..++.
T Consensus 28 ~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~-~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~ 106 (368)
T PRK03317 28 PVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYP-DRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQ 106 (368)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCC-CCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHH
Confidence 4778877655 455888888876532 223453 356789999999998 32 2 2366666655 5555555
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018240 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
+++ ++||.|+++.|+|.. +. ..+...|.+++.++.++++.+|++.+++.+++ .++++|++++ ++||||
T Consensus 107 ~~~-~~gd~v~v~~P~y~~-~~--~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~-------~~~~~i~l~~-p~NPtG 174 (368)
T PRK03317 107 AFG-GPGRTALGFVPSYSM-HP--IIARGTHTEWVEGPRAADFTLDVDAAVAAIAE-------HRPDVVFLTS-PNNPTG 174 (368)
T ss_pred Hhc-CCCCEEEEeCCChHH-HH--HHHHhcCCeeEEcccCCCCCCCHHHHHHHHhc-------cCCCEEEEeC-CCCCCC
Confidence 555 699999999999765 44 33667788888887666788999999999874 4678888865 567999
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc-hhHhhh-cCccEEEE-eccccCCCcee--eEEecCHHHHHH
Q 018240 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV-PVRRLV-QAADSASV-CLSKGLGAPVG--SVIVGSKEFIKK 226 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~-~~~~~~-~~~d~~~~-s~~K~~g~~~g--g~~~~~~~~~~~ 226 (359)
.+++.+++++|+++| +++||+||+|.... +.+. +...+. ...+++++ |+||.+|.++- ||+++++++++.
T Consensus 175 ~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~--~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~ 249 (368)
T PRK03317 175 TALPLDDVEAILDAA---PGIVVVDEAYAEFR--RSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDA 249 (368)
T ss_pred CCCCHHHHHHHHHHC---CceEEEeCCchhhc--ccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHH
Confidence 999976666665555 79999999975422 1221 222221 22355555 99999986432 889999999988
Q ss_pred HHHHHHhhCCCcchhHHHHHHHHHHHHHh--HHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceE-EEEEeccchHHH
Q 018240 227 ARRLRKTLGGGMRQVGVLCAAALVALQEN--VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNI-VYFEITEDSKLY 303 (359)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~ 303 (359)
++..... +..+.+.+.++..+++.. ..+.++++.++++.+.+.|++. |+.+. ++ .+++ +|..+. +
T Consensus 250 l~~~~~~----~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~-~~~~~~~~~~~-----~ 317 (368)
T PRK03317 250 LRLVRLP----YHLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL-GLRVA-PS-DANFVLFGRFA-----D 317 (368)
T ss_pred HHhcCCC----CCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEeC-CC-CCcEEEEeccC-----C
Confidence 7754422 223445555555555321 1224556677788889999887 88764 33 4444 443432 4
Q ss_pred HHHHHHHHHhcCceeccCC-CcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 304 AACLLKKLEEHGVLVMPES-STRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 304 ~~~~~~~l~~~gi~~~~~~-~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
..++.+.|.++||.+.+.+ ..++|++++ +.+++++++++|+++++.
T Consensus 318 ~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~---~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 318 RHAVWQGLLDRGVLIRDVGIPGWLRVTIG---TPEENDAFLAALAEVLAT 364 (368)
T ss_pred HHHHHHHHHHCCEEEEeCCCCCeEEEecC---CHHHHHHHHHHHHHHHHH
Confidence 5688899989999997754 478999984 678999999999988753
No 125
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.97 E-value=1.3e-29 Score=227.16 Aligned_cols=333 Identities=16% Similarity=0.130 Sum_probs=217.2
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHH-HHhC-------CC----CeEEcCCchHHHHHHHH
Q 018240 4 RTVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMA-KVMG-------KE----AGLFVPSGTMGNLISVL 71 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la-~~~~-------~~----~~~~~~~gt~a~~~~l~ 71 (359)
..|+|..+.+..+.+++..++.+...+. .|....+...++++++ +++. .+ ..+++.|+++|+..++.
T Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~-~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~ 173 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFLYEMCDGIIGD-NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFD 173 (521)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHhhcC-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence 4688888888777766667666654444 3544444444444444 4432 12 23455566677777776
Q ss_pred Hh----hhhcCCeEEecCCCcceeecccccccc--CCccceeeecCC--C-----CCCCHHHHHHHhcCCCCCccCCcee
Q 018240 72 VH----CETRGSEVILGDNSHIHIYENGGISTI--GGVHPRTVKNNQ--D-----GTMDIDLIEAAIRDPKGEIVYPTTR 138 (359)
Q Consensus 72 ~~----~~~~g~~vl~~~~~~~~~~~~~~~~~~--~g~~~~~v~~~~--~-----~~~~~~~l~~~l~~~~~~~~~~~~~ 138 (359)
++ +..+||+|+++.|+|..... .+.+ .|.+++.++.+. + +.+|.+++++.++ ++++
T Consensus 174 ~l~~~~ll~pGD~Vlv~~P~y~~y~~---~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~--------~~~k 242 (521)
T TIGR03801 174 SLKANELLKKGDKIALMTPIFTPYLE---IPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD--------PSIK 242 (521)
T ss_pred HHhHhhcCCCCCEEEEeCCCcHHHHH---HHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC--------CCCc
Confidence 62 23699999999999776543 2444 366777775432 2 7789999998777 7899
Q ss_pred EEEEeccccCCCceecChhhHHHHHHHHHHc--CcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee--
Q 018240 139 LICLENTHANCGGRCLSVEYTDSVGEIAKKH--GLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-- 214 (359)
Q Consensus 139 ~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~--~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-- 214 (359)
+|++++| +||||.+++.+++++|+++|++| +++||+||+|.. +.....+........-+++.|+||.||.++.
T Consensus 243 ai~l~nP-~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~--f~~~~~sl~~~~~~~vI~v~SfSK~fg~~G~Rl 319 (521)
T TIGR03801 243 ALFVVNP-SNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGT--FVDDFRSLFAELPYNTIGVYSFSKYFGATGWRL 319 (521)
T ss_pred EEEEeCC-CCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchh--hcccccchhhhCCCCEEEEEcchhhccCchhhh
Confidence 9999654 57999999999999999999987 999999999643 2222223323211112444599999998766
Q ss_pred eEEecCHH-----HHH--------HH------------------------HHHHHhhCCCcchhHHHHHH--H-HHHH--
Q 018240 215 SVIVGSKE-----FIK--------KA------------------------RRLRKTLGGGMRQVGVLCAA--A-LVAL-- 252 (359)
Q Consensus 215 g~~~~~~~-----~~~--------~~------------------------~~~~~~~~~~~~~~~~~~~~--~-~~~l-- 252 (359)
||++.+++ +++ .+ +........+.+.+.+.+.+ + ...+
T Consensus 320 G~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~ 399 (521)
T TIGR03801 320 GTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDK 399 (521)
T ss_pred hhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhcc
Confidence 88888654 221 11 22233333333333333222 2 2222
Q ss_pred -HHhHHHHhhhHHHHHHHHHHHHhcCCCceEe-cCCccceEEEEEeccchH--------------HHHHHHHHHH-HhcC
Q 018240 253 -QENVLVMLDGDHKKAKLLAEGLNQLKGLRVD-VDAVETNIVYFEITEDSK--------------LYAACLLKKL-EEHG 315 (359)
Q Consensus 253 -~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~l-~~~g 315 (359)
+...++.++.++++++.+.+.| |+.+. .++.++.++|+.++.-.. .+..+++.+| .++|
T Consensus 400 ~~~y~~~~~~~~~~R~~~l~~~L----g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~g 475 (521)
T TIGR03801 400 ENAYKAETKDICRRREKLLFRGL----GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETG 475 (521)
T ss_pred chhHHHHHHHHHHHHHHHHHHhc----CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCC
Confidence 2344445667777777877777 44432 245577889998874100 1356778888 7889
Q ss_pred ceeccCC-----CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 018240 316 VLVMPES-----STRVRIVVHHQISANDVHYTLSCFQKIYAGVCEE 356 (359)
Q Consensus 316 i~~~~~~-----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 356 (359)
|.+.||. ..++|+++. ..+++++.++.++|+++++++..+
T Consensus 476 V~v~PG~~Fg~~~~~vRisla-~l~~~~~~~~~~rl~~~~~~~~~~ 520 (521)
T TIGR03801 476 IVLLPGGGFGGPEWSVRVSLA-NLNEYDYAEIGRAIRKILDEYYEA 520 (521)
T ss_pred EEEeCchhcCCCCCeEEEEec-CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 9998873 346999995 478999999999999999888654
No 126
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.97 E-value=1.2e-29 Score=223.27 Aligned_cols=308 Identities=20% Similarity=0.188 Sum_probs=213.3
Q ss_pred ccccccCCCCCCh-HHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHh----CCC----CeEEcCCc-hHHHHHHHHHh
Q 018240 4 RTVDLRSDTVTKP-TEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVM----GKE----AGLFVPSG-TMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~~----~~~~~~~g-t~a~~~~l~~~ 73 (359)
..+||.++++..| .+.+.+++.+.. ....|....+..++++++++++ |.+ ..+++++| ++++..++..+
T Consensus 22 ~~i~l~~~~p~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l 100 (357)
T TIGR03539 22 GIVDLSVGTPVDPVPPLIRAALAAAA-DAPGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLL 100 (357)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHH-hhCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHH
Confidence 3589998876554 477777776543 3345766677889999998887 432 23555555 55555555555
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee
Q 018240 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC 153 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~ 153 (359)
..++||.|++++|+|..... .+...|++++.++ +.+. ++. .++++|++++ ++||||.+
T Consensus 101 ~~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~-------~~~~----l~~-------~~~~~v~~~~-p~NPtG~~ 158 (357)
T TIGR03539 101 GLGPGDTVVIPELAYPTYEV---GALLAGATPVAAD-------DPTE----LDP-------VGPDLIWLNS-PGNPTGRV 158 (357)
T ss_pred cCCCCCEEEECCCCcHHHHH---HHHhcCCEEeccC-------Chhh----cCc-------cCccEEEEeC-CCCCcCcc
Confidence 24699999999999866443 3667788877763 3222 322 5788999865 66699999
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhc-----Cc-cEE-EEeccccCCCcee--eEEecCHHHH
Q 018240 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQ-----AA-DSA-SVCLSKGLGAPVG--SVIVGSKEFI 224 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-----~~-d~~-~~s~~K~~g~~~g--g~~~~~~~~~ 224 (359)
++.+++++|.++|+++|++||+||+|.... +.+.....+.. .. .++ +.|+||.|+.++. ||++++++++
T Consensus 159 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~--~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~ 236 (357)
T TIGR03539 159 LSVDELRAIVAWARERGAVVASDECYLELG--WEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPALV 236 (357)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEecchhhhc--cCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCHHHH
Confidence 999999999999999999999999964322 22221111110 11 234 4499999976543 8999999999
Q ss_pred HHHHHHHHhhCCCcchhHHHHHHHHHHH--HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHH
Q 018240 225 KKARRLRKTLGGGMRQVGVLCAAALVAL--QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKL 302 (359)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 302 (359)
+.++..+...+.+. +...+.++...+ ..+.+..++.+.++++.+.+.|++. |+.+. ++..+.++|+.++.
T Consensus 237 ~~~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-g~~~~-~p~~~~~~~~~~~~---- 308 (357)
T TIGR03539 237 AELLTVRKHAGLMV--PAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA-GFRID-HSEAGLYLWATRGE---- 308 (357)
T ss_pred HHHHHHHhhcccCC--CHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCCCc-CCCccEEEEEECCC----
Confidence 98877665544333 334444455555 2344445666778889999999987 87764 34466778888754
Q ss_pred HHHHHHHHHHhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHH
Q 018240 303 YAACLLKKLEEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCF 346 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l 346 (359)
+..++.+.|.++||.+.|+. ..++|++++ .+++++++++++|
T Consensus 309 ~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~--~~~~~i~~~~~~l 356 (357)
T TIGR03539 309 DAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALT--ATDERIAAAVARL 356 (357)
T ss_pred CHHHHHHHHHhCCEEECCccccCCCCCCeEEEEec--CCHHHHHHHHHhh
Confidence 45678889999999997753 468999995 4788999988876
No 127
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.97 E-value=2.1e-29 Score=225.02 Aligned_cols=324 Identities=16% Similarity=0.124 Sum_probs=213.7
Q ss_pred cccccccCCCCCCh-HHHHHHHHHcCCCC------CCccCCChHHHHHHHHHHHHh---CCC-CeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSDTVTKP-TEAMRAAMASAEVD------DDVLMHDPTAFRLETEMAKVM---GKE-AGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~~~~~~-~~~~~~a~~~~~~~------~~~~~~~~~~~~l~~~la~~~---~~~-~~~~~~~gt~a~~~~l~ 71 (359)
...|+|..+.+..+ .+.+.+++.+.... ...|++.++..++++++++++ +.+ ..+++++|++..+..+.
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l~ 112 (402)
T TIGR03542 33 ADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRLQ 112 (402)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHHH
Confidence 35688988776543 46677766653322 234767788999999999976 332 23667777665555566
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCc-----------cceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEE
Q 018240 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGV-----------HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLI 140 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~-----------~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v 140 (359)
.++ .+|++|++++|+|.... ..++..|+ +++.++.+....++.+ +. +. .++++|
T Consensus 113 ~l~-~~gd~Vlv~~P~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~---~~-------~~~~~i 177 (402)
T TIGR03542 113 SLF-GSDNTVAVQDPVYPAYV---DSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPD-LP---EE-------PKIDII 177 (402)
T ss_pred Hhc-CCCCEEEEeCCCCcchH---HHHHHcCCccccccccccceEEEeecchhhCCCCC-cc---cc-------CCceEE
Confidence 666 58999999999976644 34677787 7777765432222222 11 11 468899
Q ss_pred EEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhcCcc-EE-EEeccccCCCcee--e
Q 018240 141 CLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQAAD-SA-SVCLSKGLGAPVG--S 215 (359)
Q Consensus 141 ~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~~~d-~~-~~s~~K~~g~~~g--g 215 (359)
+++ .++||||.+++.+++++|+++|++|+++||+||+|........ ..+...+....+ ++ +.|+||.||.|+- |
T Consensus 178 ~l~-nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG 256 (402)
T TIGR03542 178 YLC-SPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLG 256 (402)
T ss_pred EEe-CCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceE
Confidence 996 5677999999999999999999999999999999754322110 112222221122 44 4499999986544 8
Q ss_pred EEecCHHHH--------HHHHHHHHhhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEe
Q 018240 216 VIVGSKEFI--------KKARRLRKTLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVD 283 (359)
Q Consensus 216 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~ 283 (359)
|++++++++ +.+.........+. +.+.+.++...+. ....+.++.+.++++.+.+.|++. ++++.
T Consensus 257 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~--s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~ 333 (402)
T TIGR03542 257 WTVVPKELTYADGHSVIQDWERRQCTKFNGA--SYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA-GFKVY 333 (402)
T ss_pred EEEecHHHhhcchhhHHHHHHHHhhhcccCC--CHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-Cceec
Confidence 999988876 22111111111122 3333333333332 122234556778888999999987 77764
Q ss_pred cCCccceEEEEEeccchHHHHHHHHHHH-HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 284 VDAVETNIVYFEITEDSKLYAACLLKKL-EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
++..++++|+.++.. .+..++.+.| +++||.+.|+. .+++||++. .+++++++++++|++++
T Consensus 334 -~~~~~~f~~v~l~~~--~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~~ 402 (402)
T TIGR03542 334 -GGEHAPYLWVKTPEG--ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAF--GKRENIVEACERIKEAL 402 (402)
T ss_pred -CCCceeEEEEECCCC--CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHhhC
Confidence 345788999999752 4667888887 57899997753 468999974 58899999999998753
No 128
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.97 E-value=2.1e-29 Score=220.86 Aligned_cols=309 Identities=20% Similarity=0.245 Sum_probs=216.0
Q ss_pred ChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCC---------------
Q 018240 15 KPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGS--------------- 79 (359)
Q Consensus 15 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~--------------- 79 (359)
.++++++++|.+.. +..+...+...++++.+++++|.+.+++++|||+|+..++.+++ ++||
T Consensus 24 ~~~~~v~~a~~~~~--~~~~~~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al~al~-~~Gd~~~~~~~~~s~~~~~ 100 (363)
T TIGR01437 24 TVSDEVADAQKRGA--QNYFEIKELVNKTGEYIANLLGVEDAVIVSSASAGIAQSVAAVI-TRGNRYLVENLHDSKIEVN 100 (363)
T ss_pred CCCHHHHHHHHHHH--hcCCCHHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHHHHHh-cCCCcchhhcccccccccc
Confidence 45689999998863 22344556778999999999999988999999999999999997 4787
Q ss_pred eEEecCCCccee---eccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecCh
Q 018240 80 EVILGDNSHIHI---YENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSV 156 (359)
Q Consensus 80 ~vl~~~~~~~~~---~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~ 156 (359)
+|+++.|.+... +. ....+.|+++++++. ++.+|+++++++++ ++++++++.+.++||+|.+.+
T Consensus 101 eVi~~~~~~~~~~~~~~--~~~~~~g~~~v~v~~--~~~~d~~~le~ai~--------~~t~ai~~v~~~~~~~g~~~~- 167 (363)
T TIGR01437 101 EVVLPKGHNVDYGAPVE--TMVRLGGGKVVEAGY--ANECSAEQLEAAIT--------EKTAAILYIKSHHCVQKSMLS- 167 (363)
T ss_pred eEEEECccchhcCCchH--HHHHhcCCeEEEEcC--CCCCCHHHHHHhcC--------hhceEEEEEecCCCCcCCcCC-
Confidence 888877544322 12 235678889988865 45689999999999 788877754666669999888
Q ss_pred hhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHHhhCC
Q 018240 157 EYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGG 236 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~~~~~ 236 (359)
+++|.++|++||+++|+|++|.... .....+ ++|++++|+||++++|.+|+++.++++++.++......+.
T Consensus 168 --~~~i~~~a~~~gi~vivD~a~~~~~-----~~~~~~--g~D~~~~S~~K~l~gp~~G~l~~~~~~i~~~~~~~~~~~~ 238 (363)
T TIGR01437 168 --VEDAAQVAQEHNLPLIVDAAAEEDL-----QKYYRL--GADLVIYSGAKAIEGPTSGLVLGKKKYIEWVKLQSKGIGR 238 (363)
T ss_pred --HHHHHHHHHHcCCeEEEECCCCCch-----HHHHHc--CCCEEEEeCCcccCCCceEEEEEcHHHHHHHHhccCCCcc
Confidence 7889999999999999999985211 111222 6899999999999888788888888888775432221111
Q ss_pred CcchhHHHHHHHHHHHHHhH---HHHhhhHHHHHHHHHHHHhcCCCceEecCCccc------eEEEEEeccchHHHHHHH
Q 018240 237 GMRQVGVLCAAALVALQENV---LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVET------NIVYFEITEDSKLYAACL 307 (359)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 307 (359)
.........++...+++... .+..+...++++++.+.|+++||+++..+.... ..+.+.... .+.+..++
T Consensus 239 ~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~-~g~~~~~l 317 (363)
T TIGR01437 239 AMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESE-LGMTAADV 317 (363)
T ss_pred eeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccC-CCCCHHHH
Confidence 11111111122222332222 124455666788899999999999875321111 122233321 24688999
Q ss_pred HHHHHhcC--ceecc--CCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 308 LKKLEEHG--VLVMP--ESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 308 ~~~l~~~g--i~~~~--~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
.+.|+++| |.+.+ ...+.+|+.+. .++++|++.++++|++++
T Consensus 318 ~~~L~~~~~~I~~r~~~~~~~~~~l~~~-~~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 318 VQALRQGEPAIYTRGYKANEGIIEIDPR-SVTGGQLDIIVERIREIV 363 (363)
T ss_pred HHHHhcCCCCEEEeeeeecCCeEEEEee-cCCHHHHHHHHHHHHHhC
Confidence 99998877 55442 35678899887 577999999999998763
No 129
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.97 E-value=3.1e-29 Score=223.66 Aligned_cols=328 Identities=20% Similarity=0.234 Sum_probs=228.9
Q ss_pred cccccccCCC-CCC-hHHHHHHHHHcCCCC----CCcc----CCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSDT-VTK-PTEAMRAAMASAEVD----DDVL----MHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~-~~~-~~~~~~~a~~~~~~~----~~~~----~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~ 72 (359)
.++|||.+++ ... ++|.+.+++.+.... ...| +..+...++++.+++++|.+..+++++|++++..++..
T Consensus 33 ~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~~~~i~~~sG~~a~~~a~~~ 112 (385)
T TIGR01825 33 KEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKTEAALVFQSGFNTNQGVLSA 112 (385)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHH
Confidence 3578999875 444 557887777764431 1122 22455688888899988988889999999999988888
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018240 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
++ ++||.|++++++|.+... + +...|.++..++ .+|++++++.+++..+ +++++|++++ .+||||.
T Consensus 113 ~~-~~gd~vi~~~~~~~~~~~-~--~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~----~~~~~v~~~~-v~~~tG~ 178 (385)
T TIGR01825 113 LL-RKGDIVLSDELNHASIID-G--LRLTKATKKIYK-----HADMDDLDRVLRENPS----YGKKLIVTDG-VFSMDGD 178 (385)
T ss_pred hC-CCCCEEEEEccccHHHHH-H--HHhcCCceEEeC-----CCCHHHHHHHHHhhcc----CCCeEEEEec-CCcCCCC
Confidence 87 599999999999887654 2 456676666553 3588889888874211 3677887744 4559999
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch---hHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHH
Q 018240 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP---VRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARR 229 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~---~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~ 229 (359)
+.+ +++|.++|++||+++|+|++|+.+.....+.. ......+.++++.|+||++|+ .|||+++++++++.+..
T Consensus 179 ~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~gG~~~~~~~~~~~~~~ 254 (385)
T TIGR01825 179 VAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGV-VGGYAAGHKELIEYLKN 254 (385)
T ss_pred ccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhc-CCCEEecCHHHHHHHHH
Confidence 877 79999999999999999999866544322211 111223556777899999986 45788889988888765
Q ss_pred HHHhhCCCcchhHHHHHHHHHHHHHhH--HHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHH
Q 018240 230 LRKTLGGGMRQVGVLCAAALVALQENV--LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACL 307 (359)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (359)
....+..+....+..++++..+++... .+..++..++++++.+.|+++ |+++.. ..++++.+.++. ..+..++
T Consensus 255 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~--~~~~~~~ 329 (385)
T TIGR01825 255 RARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKL-GYDTGG--SETPITPVVIGD--EKAAQEF 329 (385)
T ss_pred hCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCC--CCCCEEEEEECC--HHHHHHH
Confidence 433221111123343444444553221 125667778899999999987 887643 245566666543 2356789
Q ss_pred HHHHHhcCceecc-------CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 308 LKKLEEHGVLVMP-------ESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 308 ~~~l~~~gi~~~~-------~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.+.|.++||.+.+ .+...+|++++..++++++++++++|++++++.
T Consensus 330 ~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 330 SRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred HHHHHHCCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence 9999778998732 234689999988999999999999999988654
No 130
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.97 E-value=4.1e-29 Score=222.88 Aligned_cols=323 Identities=17% Similarity=0.142 Sum_probs=215.5
Q ss_pred ccccccCCCC-----CCh-HHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhCCC-------Ce---EEcCCchHH
Q 018240 4 RTVDLRSDTV-----TKP-TEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMGKE-------AG---LFVPSGTMG 65 (359)
Q Consensus 4 ~~id~~~~~~-----~~~-~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~~~-------~~---~~~~~gt~a 65 (359)
..|||..+.+ ..| .+.+.+++.+.... ...|+...+..++|+++++++... .. ++++|+++|
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~a 106 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGA 106 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHH
Confidence 5688888742 223 26788887776532 235888889999999999987322 12 344555667
Q ss_pred HHHHHHHhh-hhcCCeEEecCCCcceeeccccccccCCccceeeec--CCCCCCCHHHHHHHhcCCCCCccCCceeEEEE
Q 018240 66 NLISVLVHC-ETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN--NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICL 142 (359)
Q Consensus 66 ~~~~l~~~~-~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i 142 (359)
+..++..+. ..+||.|++++|+|.... ..++..|++++.++. .+++.+|++.+++.+++. ...+.+++
T Consensus 107 l~~~~~~l~~~~pGd~Vlv~~P~y~~~~---~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~------~~~~~~~i 177 (396)
T PRK09257 107 LRVGADFLKRAFPDAKVWVSDPTWPNHR---AIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQA------PAGDVVLL 177 (396)
T ss_pred HHHHHHHHHHhCCCCeEEECCCCcccHH---HHHHHcCCcEEEEeccccccCccCHHHHHHHHHhC------CCCCEEEE
Confidence 777765543 259999999999976644 347889999999975 345789999999988742 12235555
Q ss_pred eccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc--CchhHhhhc-CccEEE-EeccccCCCcee--eE
Q 018240 143 ENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL--GVPVRRLVQ-AADSAS-VCLSKGLGAPVG--SV 216 (359)
Q Consensus 143 ~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~--~~~~~~~~~-~~d~~~-~s~~K~~g~~~g--g~ 216 (359)
.+++|||||.+++.+++++|+++|++||++||+|++|........ ..+...+.. ...+++ .|+||.|+.++. ||
T Consensus 178 ~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~ 257 (396)
T PRK09257 178 HGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGA 257 (396)
T ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCcccccccee
Confidence 588888999999999999999999999999999999643221100 112222222 223554 499999986433 87
Q ss_pred Ee---cCHHHHHH----HHHHHHhhCCCcchhHHHHHHHHHHH---------HHhHHHHhhhHHHHHHHHHHHHhcCC--
Q 018240 217 IV---GSKEFIKK----ARRLRKTLGGGMRQVGVLCAAALVAL---------QENVLVMLDGDHKKAKLLAEGLNQLK-- 278 (359)
Q Consensus 217 ~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l---------~~~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (359)
++ .+++.... +.........+. +...+.++...+ .+++++.++++.++++.+.+.|++..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~ 335 (396)
T PRK09257 258 LSVVAEDAEEADRVLSQLKATIRTNYSNP--PAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPS 335 (396)
T ss_pred EEEEeCCHHHHHHHHHHHHHHhhhhcCCC--cHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 76 34443333 222222211222 222222222222 33444467778889999999999871
Q ss_pred -CceEecCCccceEEEEEeccchHHHHHHHHHHH-HhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 279 -GLRVDVDAVETNIVYFEITEDSKLYAACLLKKL-EEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 279 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
++.+. .+.++.++|+.++. ++.+.| .++||.+.|.+ ||+++ ..+++++++++++|++++
T Consensus 336 ~~~~~~-~p~gg~~~w~~l~~-------~~~~~l~~~~~V~~~p~~----ri~~~-~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 336 RDFDFI-ARQRGMFSYSGLTP-------EQVDRLREEFGVYAVGSG----RINVA-GLNESNIDYVAEAIAAVL 396 (396)
T ss_pred CCcccc-cccceEEEecCCCH-------HHHHHHHHcCCEEEcCCC----eEEEe-eCCHHHHHHHHHHHHhhC
Confidence 24543 35688899998753 344445 88999998753 99996 589999999999998753
No 131
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.97 E-value=3.2e-29 Score=220.68 Aligned_cols=309 Identities=24% Similarity=0.262 Sum_probs=226.1
Q ss_pred CCCCCChHHHHHHHHHcCCCCCCccC--CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCC
Q 018240 10 SDTVTKPTEAMRAAMASAEVDDDVLM--HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNS 87 (359)
Q Consensus 10 ~~~~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~ 87 (359)
++++..+..+..+++.........|+ ..|...++|+.+++++|.+.+++++||++|+..++.+++ ++||+|+++.+.
T Consensus 10 ~~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~-~~gd~Vl~~~~~ 88 (369)
T cd00614 10 TSTFVFPSPAEAADLFALREGGYIYSRIGNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALL-KAGDHVVASDDL 88 (369)
T ss_pred CCceecCCHHHHHHhhcCCcCCceeECCCChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHc-CCCCEEEECCCC
Confidence 34556666555554443322334455 578899999999999999999999999999999999988 599999999999
Q ss_pred cceeeccc-cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHH
Q 018240 88 HIHIYENG-GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIA 166 (359)
Q Consensus 88 ~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~ 166 (359)
|.+.+... ..+...|+++..++.+ |++++++.++ +++++|+++++.| |+|.+.+ +++|.++|
T Consensus 89 y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~--------~~~~~v~~e~~~n-p~g~~~d---l~~i~~la 151 (369)
T cd00614 89 YGGTYRLFERLLPKLGIEVTFVDPD-----DPEALEAAIK--------PETKLVYVESPTN-PTLKVVD---IEAIAELA 151 (369)
T ss_pred cchHHHHHHHHHhhcCeEEEEeCCC-----CHHHHHHhcC--------CCCeEEEEECCCC-CCCeecC---HHHHHHHH
Confidence 87765311 1244678888888665 7899999998 6889999976655 9999887 89999999
Q ss_pred HHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCc---eeeEEecCH-HHHHHHHHHHHhhCCCcchhH
Q 018240 167 KKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAP---VGSVIVGSK-EFIKKARRLRKTLGGGMRQVG 242 (359)
Q Consensus 167 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~---~gg~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 242 (359)
+++|+++|+|++++.+.. ..++..++|+++.|++|+++++ .||++++++ ++.++++.....++.+. ++
T Consensus 152 ~~~g~~livD~t~~~~~~------~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~--~p 223 (369)
T cd00614 152 HEHGALLVVDNTFATPYL------QRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTIL--SP 223 (369)
T ss_pred HHcCCEEEEECCCcchhc------CChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCC--CH
Confidence 999999999999654322 1222337899999999999864 368888876 88888887776666654 55
Q ss_pred HHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCce-EecC---------------CccceEEEEEeccchHHHHHH
Q 018240 243 VLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLR-VDVD---------------AVETNIVYFEITEDSKLYAAC 306 (359)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~~ 306 (359)
..++++..+++.... ++++..+++.++.+.|++.|++. +..| ...+.++.|.+.. ......+
T Consensus 224 ~~a~~~l~~l~tl~~-r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~-~~~~~~~ 301 (369)
T cd00614 224 FDAWLLLRGLKTLPL-RMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG-GLEAAKK 301 (369)
T ss_pred HHHHHHHcCCCCHHH-HHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC-CHHHHHH
Confidence 666666677765444 78889999999999999987664 3222 1357788888864 2345667
Q ss_pred HHHHHHhcCceec----------cC-----------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 307 LLKKLEEHGVLVM----------PE-----------------SSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 307 ~~~~l~~~gi~~~----------~~-----------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
|.+.|+--++.+. |. .++.+|+++. + |+.+.+++.|++++
T Consensus 302 f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svG--l--E~~~dl~~dl~~al 368 (369)
T cd00614 302 FLNALKLFSLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVG--I--EDVEDLIADLEQAL 368 (369)
T ss_pred HHHcCCcceEcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeC--c--CCHHHHHHHHHHhh
Confidence 7776643322210 10 1356999995 4 68888888888775
No 132
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=5.4e-29 Score=216.72 Aligned_cols=301 Identities=17% Similarity=0.154 Sum_probs=207.2
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCe-EEcCCchHHHHHHHHHhhhhcCCeEEe
Q 018240 5 TVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAG-LFVPSGTMGNLISVLVHCETRGSEVIL 83 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-~~~~~gt~a~~~~l~~~~~~~g~~vl~ 83 (359)
.|||+++.+..+.. .....| +.+...+|++.++++++.+.. +++++|++..+..+..++ +++ .|++
T Consensus 18 ~i~l~~Nenp~~~~----------~~~~~Y-p~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~~-~~~-~vv~ 84 (332)
T PRK06425 18 IIDFSANINDFMDI----------GDISIY-PEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSYI-NVG-NIII 84 (332)
T ss_pred EEEeccccCCCcCh----------hhcccC-cCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHh-CCC-cEEE
Confidence 47777775554311 011224 345689999999999999763 666666654444444455 465 5777
Q ss_pred cCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHH
Q 018240 84 GDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVG 163 (359)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~ 163 (359)
++|+|.. +. ..++..|++++.++.+. ..+|.+.++ . .++++|+++ .+|||||.+++.+++++|.
T Consensus 85 ~~P~y~~-y~--~~~~~~G~~v~~vp~~~-~~~~~~~l~----~-------~~~k~v~l~-nP~NPTG~~~s~~~~~~l~ 148 (332)
T PRK06425 85 VEPNFNE-YK--GYAFTHGIRISALPFNL-INNNPEILN----N-------YNFDLIFIV-SPDNPLGNLISRDSLLTIS 148 (332)
T ss_pred eCCChHH-HH--HHHHHcCCeEEEEeCCc-ccCcHHHHh----h-------cCCCEEEEe-CCCCCcCCccCHHHHHHHH
Confidence 7999666 44 34888999999998754 334544333 2 467899986 5677999999999999999
Q ss_pred HHHHHcCcEEEEecccccchhhhcC-chhHhhhcC-ccEEEE-eccccCCCcee--eEEecCHHHHHHHHHHHHhhCCCc
Q 018240 164 EIAKKHGLKLHIDGARIFNAAVALG-VPVRRLVQA-ADSASV-CLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGGGM 238 (359)
Q Consensus 164 ~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~~-~d~~~~-s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~~~ 238 (359)
++|+++|++||+||+|.... +.+ .+...+... ..++++ |+||.+|.|+. ||+++++++++.+......+. .
T Consensus 149 ~~a~~~~~~iI~DE~Y~~~~--~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~~~--~ 224 (332)
T PRK06425 149 EICRKKGALLFIDEAFIDFV--PNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKITEPWS--V 224 (332)
T ss_pred HHHHHcCCEEEEecchhccc--cccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHcCCCCc--c
Confidence 99999999999999964322 222 122233222 235555 99999997554 999999999988765433221 1
Q ss_pred chhHHHHHHHH-HHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCce
Q 018240 239 RQVGVLCAAAL-VALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVL 317 (359)
Q Consensus 239 ~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~ 317 (359)
+.....+.. ...+.+.++.++.+.++++++.+.|+++ ++.+.. +..++++|+.++ +..++.+.|.++||.
T Consensus 225 --~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~-~~~g~f~~~~~~-----~~~~~~~~l~~~gi~ 295 (332)
T PRK06425 225 --CDPAIDFIRSIDLDYVAKHSLDIMENERSYLINNLEAM-GFRAAG-DPSANFITFMIP-----DAHDFYSYLLKNGIL 295 (332)
T ss_pred --CHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECC-CCCceEEEEEcC-----CHHHHHHHHHHCCeE
Confidence 112211211 1223344446677888899999999998 887643 347889999875 356888999889999
Q ss_pred eccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 318 VMPES------STRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 318 ~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
+.++. .+++||++ .+.++.++++++|++++
T Consensus 296 v~~~~~f~~~~~~~iRis~---~~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 296 VRLLDDYECLGEQYIRIAI---RRRSFNIKLVNALRNFL 331 (332)
T ss_pred EEECCCCCCCCCCEEEEEe---CCHHHHHHHHHHHHHHh
Confidence 97653 35899999 46889999999998765
No 133
>PRK02948 cysteine desulfurase; Provisional
Probab=99.97 E-value=1.1e-29 Score=226.00 Aligned_cols=326 Identities=18% Similarity=0.185 Sum_probs=224.2
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCCC---C--ccCC----ChHHHHHHHHHHHHhCCCC-eE-EcCCchHHHHHHHHHh
Q 018240 5 TVDLRSDTVTKPTEAMRAAMASAEVDD---D--VLMH----DPTAFRLETEMAKVMGKEA-GL-FVPSGTMGNLISVLVH 73 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~~---~--~~~~----~~~~~~l~~~la~~~~~~~-~~-~~~~gt~a~~~~l~~~ 73 (359)
++.|.+...+.+++.+.+++.+..... . .+.. ....+++++.+++++|.+. .+ +++|+++++..++..+
T Consensus 1 ~~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~ 80 (381)
T PRK02948 1 MIYLDYAATTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSL 80 (381)
T ss_pred CEeccCCCCCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHH
Confidence 367888877777788888886533211 1 1111 2345788999999998753 44 5556688888887777
Q ss_pred hh---hcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018240 74 CE---TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 74 ~~---~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
.. ++|+.|+++...|.+.......++..|++++.++.+.++.+|++++++.++ +++++|+++++ +|||
T Consensus 81 ~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~--------~~~~lv~~~~~-~n~t 151 (381)
T PRK02948 81 LNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAIT--------PDTVLASIQHA-NSEI 151 (381)
T ss_pred HHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcC--------CCCEEEEEECC-cCCc
Confidence 52 468899999988877654222345678899999887788899999999998 67889988665 4599
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHH-HHHH
Q 018240 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFI-KKAR 228 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~-~~~~ 228 (359)
|.+.| +++|.++|+++|+++|+|++|.++... .....+ +.|+++.|+||++| |.| |+++.++++. ....
T Consensus 152 G~~~~---~~~I~~l~~~~~~~vivD~~~~~g~~~---~~~~~~--~~d~~~~s~~K~~g-p~G~G~l~~~~~~~~~~~~ 222 (381)
T PRK02948 152 GTIQP---IAEIGALLKKYNVLFHSDCVQTFGKLP---IDVFEM--GIDSLSVSAHKIYG-PKGVGAVYINPQVRWKPVF 222 (381)
T ss_pred Eeehh---HHHHHHHHHHcCCEEEEEChhhccccc---cCcccC--CCCEEEecHHhcCC-CCcEEEEEEcCCCCCCCcc
Confidence 99988 789999999999999999998776432 222222 68999999999887 555 7777765531 1110
Q ss_pred H----HHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCcc----ceEEEEEec
Q 018240 229 R----LRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVE----TNIVYFEIT 297 (359)
Q Consensus 229 ~----~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~----~~~~~~~~~ 297 (359)
. ......++. +.....++..+++ +..++..++..++++++.+.|+++ ++++...... ..++.+.++
T Consensus 223 ~~~~~~~~~~~~t~--~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~~~~~~i~~~~~~ 299 (381)
T PRK02948 223 PGTTHEKGFRPGTV--NVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHSTSCLPHIIGVTIK 299 (381)
T ss_pred cCCCCCCCcCCCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCccCcCCEEEEEeC
Confidence 0 000111222 2222333333332 334446677888999999999998 7655322111 223334444
Q ss_pred cchHHHHHHHHHHHHhcCceeccCC-----------------------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 298 EDSKLYAACLLKKLEEHGVLVMPES-----------------------STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 298 ~~~~~~~~~~~~~l~~~gi~~~~~~-----------------------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
. .+.+++..+|.++||.+..+. ..++|++++..++++|++++++.|+++++++-
T Consensus 300 ~---~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 376 (381)
T PRK02948 300 G---IEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFY 376 (381)
T ss_pred C---CCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 3 356778888889999996432 35899999999999999999999999987764
No 134
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.97 E-value=1e-28 Score=221.38 Aligned_cols=329 Identities=22% Similarity=0.205 Sum_probs=221.6
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCC--------CCccCCChHHHHHHH----HHHHHhCCCCe-EEcCCchHHHHHHHH
Q 018240 5 TVDLRSDTVTKPTEAMRAAMASAEVD--------DDVLMHDPTAFRLET----EMAKVMGKEAG-LFVPSGTMGNLISVL 71 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~--------~~~~~~~~~~~~l~~----~la~~~~~~~~-~~~~~gt~a~~~~l~ 71 (359)
.++|..+... .+|.+++++.+.... ...|...+....+++ .+++++|.+.. ++++||++|+..++.
T Consensus 21 ~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a~~~~l~ 99 (402)
T cd00378 21 TLELIASENF-TSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPHSGSQANLAVYF 99 (402)
T ss_pred CeeeeccCCc-CCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecCCcHHHHHHHHH
Confidence 3445433222 258899998764321 123444555555554 46788998765 666789999999999
Q ss_pred HhhhhcCCeEEecCCCcceeecccc--ccccCCccceeeecCC---CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018240 72 VHCETRGSEVILGDNSHIHIYENGG--ISTIGGVHPRTVKNNQ---DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~--~~~~~g~~~~~v~~~~---~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
++. ++||+|++++|+|.+....+. ..+..|.++..++.+. ++.+|++++++.+.+ ++++++++.++
T Consensus 100 ~l~-~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~-------~~~~~v~~~~~- 170 (402)
T cd00378 100 ALL-EPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALE-------FKPKLIVAGAS- 170 (402)
T ss_pred Hhc-CCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHh-------CCCCEEEecCc-
Confidence 887 599999999999876543111 1445676665554332 688999999999964 57888888554
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCH-HHHH
Q 018240 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSK-EFIK 225 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~-~~~~ 225 (359)
+|| ... ++++|.++|+++|+++|+|++|..+... .+.....+. +.|+++.|+||+|+++.||++++++ ++.+
T Consensus 171 ~~~--~~~---~~~~I~~l~~~~~~~li~D~a~~~g~~~-~g~~~~~~~-~~dv~~~s~sK~l~G~~gg~i~~~~~~~~~ 243 (402)
T cd00378 171 AYP--RPI---DFKRFREIADEVGAYLLVDMAHVAGLVA-GGVFPNPLP-GADVVTTTTHKTLRGPRGGLILTRKGELAK 243 (402)
T ss_pred ccC--CCc---CHHHHHHHHHhcCCEEEEEccchhhhhh-cccCCCccc-CCcEEEeccccCCCCCCceEEEeccHHHHH
Confidence 434 333 4899999999999999999998554432 221122222 5688888999999767777777765 8888
Q ss_pred HHHHHHHhhCCCcchhHHHHHHH--HHHH-HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHH
Q 018240 226 KARRLRKTLGGGMRQVGVLCAAA--LVAL-QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKL 302 (359)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~--~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 302 (359)
.++........+........+++ ...+ ....++.++++.++++++.+.|++. |+++...+..++++|+.++. .+.
T Consensus 244 ~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~v~v~~~~-~~~ 321 (402)
T cd00378 244 KINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTDNHLVLVDLRP-KGI 321 (402)
T ss_pred HHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCCCeEEEEeCCc-cCC
Confidence 87654432222221122222212 1111 2133446777889999999999998 88875444578899999874 223
Q ss_pred HHHHHHHHHHhcCceecc----C------CCcEEEEEeCC----CCCHHHHHHHHHHHHHHHHH
Q 018240 303 YAACLLKKLEEHGVLVMP----E------SSTRVRIVVHH----QISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~~~----~------~~~~lRi~~~~----~~~~~~i~~~~~~l~~~~~~ 352 (359)
+...+.+.|.++||.+.+ . ...++|++++. .++++|++++++.|++++++
T Consensus 322 ~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 322 TGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred CHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 556777788999999942 2 34579998764 45799999999999997754
No 135
>PLN02397 aspartate transaminase
Probab=99.97 E-value=2.7e-29 Score=224.82 Aligned_cols=322 Identities=14% Similarity=0.097 Sum_probs=215.5
Q ss_pred ccccccCCCC-CCh---H--HHHHHHHHcCC-CC-CCccCCChHHHHHHHHHHHHhCCCC-------eE---EcCC--ch
Q 018240 4 RTVDLRSDTV-TKP---T--EAMRAAMASAE-VD-DDVLMHDPTAFRLETEMAKVMGKEA-------GL---FVPS--GT 63 (359)
Q Consensus 4 ~~id~~~~~~-~~~---~--~~~~~a~~~~~-~~-~~~~~~~~~~~~l~~~la~~~~~~~-------~~---~~~~--gt 63 (359)
..|+|....+ ..+ . +.+.++..... .+ ...|++..+..+||+++++++.... .+ .+.+ |+
T Consensus 49 ~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga 128 (423)
T PLN02397 49 VKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGS 128 (423)
T ss_pred ceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHH
Confidence 4567777642 221 1 35666543321 12 2358888899999999999874321 11 1333 44
Q ss_pred HHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeec-C-CCCCCCHHHHHHHhcCCCCCccCCceeEEE
Q 018240 64 MGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN-N-QDGTMDIDLIEAAIRDPKGEIVYPTTRLIC 141 (359)
Q Consensus 64 ~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~ 141 (359)
.++...+..++. +||+|++++|+|.... ..++..|.+++.++. + +++.+|++.+++.+++.. +++++++
T Consensus 129 ~~l~~~~~~~~~-pGd~Vlv~~P~y~~y~---~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~-----~~~~~i~ 199 (423)
T PLN02397 129 LRLGAEFLARFY-PGSTIYIPNPTWGNHH---NIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAP-----DGSFVLL 199 (423)
T ss_pred HHHHHHHHHHhC-CCCEEEEeCCCchhHH---HHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCC-----CCCEEEE
Confidence 445666666664 9999999999976644 347888999999975 2 357889999988886320 3556666
Q ss_pred EeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc---CchhHhhhcC-ccEEEE-eccccCCCcee--
Q 018240 142 LENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL---GVPVRRLVQA-ADSASV-CLSKGLGAPVG-- 214 (359)
Q Consensus 142 i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~---~~~~~~~~~~-~d~~~~-s~~K~~g~~~g-- 214 (359)
+ +++|||||.+++.+++++|+++|++||++||+||+|....+... ..+...+... ..++++ |+||.+++++.
T Consensus 200 ~-~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~Rv 278 (423)
T PLN02397 200 H-ACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERV 278 (423)
T ss_pred e-CCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccc
Confidence 6 77888999999999999999999999999999999644332110 1122223212 235554 99999997544
Q ss_pred eEEe---cCHHHHHHHH----HHHHhhCCCcchhHHHHHHHHHHHHH------h---HHHHhhhHHHHHHHHHHHHhcCC
Q 018240 215 SVIV---GSKEFIKKAR----RLRKTLGGGMRQVGVLCAAALVALQE------N---VLVMLDGDHKKAKLLAEGLNQLK 278 (359)
Q Consensus 215 g~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~------~---~~~~~~~~~~~~~~l~~~l~~~~ 278 (359)
||++ .+++.++.+. ........+. +.+.+.++...++. + .++.++++.++++.+.+.|+++
T Consensus 279 G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~- 355 (423)
T PLN02397 279 GALSVVCKSADVAVRVKSQLKLIARPMYSNP--PIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEAR- 355 (423)
T ss_pred eEEEEEeCCHHHHHHHHHHHHHHHhcccCCC--cHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 7763 4666555432 2222222222 22333333333321 1 3446678889999999999998
Q ss_pred C----ceEecCCccceEEEEEeccchHHHHHHHHHHH-HhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 279 G----LRVDVDAVETNIVYFEITEDSKLYAACLLKKL-EEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 279 g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
+ +.+. .+.++.|+|+.++. +++++| .++||.+.+.+ |+++. ..+++++++++++|+++++
T Consensus 356 ~~~~~~~~~-~p~gg~fl~~~l~~-------~~~~~Ll~~~~V~v~~~~----Ri~~~-~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 356 GSPGDWSHI-TKQIGMFSFTGLNK-------EQVDRMTKEYHIYMTRDG----RISMA-GLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred CCCCCCCcc-cCCceEEEecCCCH-------HHHHHHHHhCCEEECCCC----eEEEe-eCCHHHHHHHHHHHHHHHh
Confidence 6 5543 35688899998752 577788 78899997554 99985 5899999999999999875
No 136
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.97 E-value=1e-28 Score=218.25 Aligned_cols=317 Identities=18% Similarity=0.236 Sum_probs=221.9
Q ss_pred CChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC---e-EEcCCchHHHHHHHHHhhhhcCCeEEecCCCcc
Q 018240 14 TKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA---G-LFVPSGTMGNLISVLVHCETRGSEVILGDNSHI 89 (359)
Q Consensus 14 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~---~-~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~ 89 (359)
..+.|.+++++... .++..-...+...++++.+++++|.+. . ++++||++++..++..++. +++++++..+.++
T Consensus 8 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~-~~~~vi~~~~~~~ 85 (355)
T TIGR03301 8 LSTSATVRDAMLVD-WCHWDSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVP-RDGKLLVLINGAY 85 (355)
T ss_pred CCCCHHHHHHhhhh-ccCCCHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccC-CCCeEEEECCCch
Confidence 34458999998872 222211123667899999999999874 2 4678999999999999884 6777665555444
Q ss_pred ee-eccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHH
Q 018240 90 HI-YENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKK 168 (359)
Q Consensus 90 ~~-~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~ 168 (359)
+. +. ..+...|.+++.++.+.++.+|++++++.+++. ++++++++.+ ++||||...+ +++|.++|++
T Consensus 86 ~~~~~--~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~------~~~~~v~~~~-~~~~~G~~~~---~~~i~~l~~~ 153 (355)
T TIGR03301 86 GERLA--KICEYLGIPHTDLNFSEYEPPDLNRIEEALAAD------PDITHVATVH-HETTTGILNP---LEAIAKVARS 153 (355)
T ss_pred hhHHH--HHHHHcCCceEEEecCCCCCCCHHHHHHHHHhC------CCceEEEEEe-cCCcccchhH---HHHHHHHHHH
Confidence 43 33 336678989999987777889999999999742 3566777644 4559999887 7999999999
Q ss_pred cCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHH--------------h
Q 018240 169 HGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRK--------------T 233 (359)
Q Consensus 169 ~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~--------------~ 233 (359)
||+++|+|++++++.. +.++..+ +.|+++.|++|+++++.| |+++.++++++.+..... .
T Consensus 154 ~~~~livD~~~s~g~~---~~~~~~~--~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (355)
T TIGR03301 154 HGAVLIVDAMSSFGAI---PIDIEEL--DVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEK 228 (355)
T ss_pred cCCEEEEEeccccCCc---ccchhhc--CccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhh
Confidence 9999999998877643 2223333 688999999999866666 899999998877651000 0
Q ss_pred hCC-CcchhHHHHHHHHHHHH----Hh-HHHHhhhHHHHHHHHHHHHhcCCCceEecCCc-c-ceEEEEEeccchHHHHH
Q 018240 234 LGG-GMRQVGVLCAAALVALQ----EN-VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV-E-TNIVYFEITEDSKLYAA 305 (359)
Q Consensus 234 ~~~-~~~~~~~~~~~~~~~l~----~~-~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 305 (359)
.+. ....+.....++..+++ .. .++.+++..++++++.+.|+++ |+++..++. . +.++++.++.....+..
T Consensus 229 ~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (355)
T TIGR03301 229 TGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVSFLYPDDPDFDFD 307 (355)
T ss_pred cCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEEEEECCCCCcchHH
Confidence 000 01112222233233332 22 4446677888899999999988 887643322 2 23466776642123567
Q ss_pred HHHHHHHhcCceeccCCC---cEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 306 CLLKKLEEHGVLVMPESS---TRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 306 ~~~~~l~~~gi~~~~~~~---~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
++.++|.++||.+.+++. .++||+++..+++++++++++.|++++
T Consensus 308 ~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 308 DFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred HHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 899999999999977642 689999977889999999999998753
No 137
>PLN02672 methionine S-methyltransferase
Probab=99.97 E-value=7e-29 Score=235.93 Aligned_cols=333 Identities=11% Similarity=0.067 Sum_probs=228.1
Q ss_pred ccccccCCCCCCh-HHHHHHHHHcCCCCCC-ccCCChHHHHHHHHHHHHhCCCC----eEEcCCchHHHHHHHHHhhhhc
Q 018240 4 RTVDLRSDTVTKP-TEAMRAAMASAEVDDD-VLMHDPTAFRLETEMAKVMGKEA----GLFVPSGTMGNLISVLVHCETR 77 (359)
Q Consensus 4 ~~id~~~~~~~~~-~~~~~~a~~~~~~~~~-~~~~~~~~~~l~~~la~~~~~~~----~~~~~~gt~a~~~~l~~~~~~~ 77 (359)
..|+|..+.+..| ++.+++++.+...... .++.......+.+.+++.+|.+. .+++++|+++++..+..++.++
T Consensus 698 ~vI~LsinE~d~ppPp~V~eAi~eal~~~~~s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~p 777 (1082)
T PLN02672 698 SLIHMDVDESFLPVPSAVKASIFESFVRQNISESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQE 777 (1082)
T ss_pred CEEEEeCCCCCCCCCHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCC
Confidence 4578887766544 4888888876432222 22333446777788888877753 4788888887776554444469
Q ss_pred CCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecC
Q 018240 78 GSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLS 155 (359)
Q Consensus 78 g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~ 155 (359)
||.|+++.|+|..... .++..|++++.++.+ .++.+|.+.+++.+++ ...++|++.+|++||||.+++
T Consensus 778 GD~VLVp~PtY~~Y~~---~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~-------~~~~~I~L~nPnhNPTG~v~S 847 (1082)
T PLN02672 778 GGTLCFPAGSNGTYVS---AAKFLKANFRRIPTKSSDGFKLTAKTLASTLET-------VKKPWVYISGPTINPTGLLYS 847 (1082)
T ss_pred CCEEEEeCCChHHHHH---HHHHcCCEEEEEecccccCCCCCHHHHHHHhcc-------CCCCEEEEECcCCCCcCccCC
Confidence 9999999999766443 478889999999875 3578899999999873 234567776766589999999
Q ss_pred hhhHHHHHHHHHHcCcEEEEecccccchhhhcC---chhHhhh---cC----ccEEEE-eccccCCCcee--eEEecC-H
Q 018240 156 VEYTDSVGEIAKKHGLKLHIDGARIFNAAVALG---VPVRRLV---QA----ADSASV-CLSKGLGAPVG--SVIVGS-K 221 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~---~~~~~~~---~~----~d~~~~-s~~K~~g~~~g--g~~~~~-~ 221 (359)
.+++++|+++|++||++||+||+|....+.... .+..+.. .. ..++++ |+||.++.++. ||++++ +
T Consensus 848 ~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~ 927 (1082)
T PLN02672 848 NSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDS 927 (1082)
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCH
Confidence 999999999999999999999997432221111 1111111 11 135555 99999987655 888885 5
Q ss_pred HHHHHHHHHHHhhCCCcchhHHHHHHHHHHH-------HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEE
Q 018240 222 EFIKKARRLRKTLGGGMRQVGVLCAAALVAL-------QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYF 294 (359)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-------~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~ 294 (359)
++++.+........... .....+.++...+ .....+.++.+.++++++.+.|++. |+.+. ++.++.++|+
T Consensus 928 eLi~~l~~~~~~s~~~~-~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~-~PeGGFfLwl 1004 (1082)
T PLN02672 928 VLIDAFHSAPGLSRPHS-TLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWDVL-EPQGGISMVA 1004 (1082)
T ss_pred HHHHHHHHhhhhcCCCc-HHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEe-cCCcEEEEEE
Confidence 58888876543332222 1112222222212 2334446667888999999999998 88864 4557777888
Q ss_pred Eecc----------c-----hHHHHHHHHHHHH-hcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 295 EITE----------D-----SKLYAACLLKKLE-EHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 295 ~~~~----------~-----~~~~~~~~~~~l~-~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.++. . .+.+..++.++|. +.||.+.|+. .+++||++. .+++++++++++|+++.+
T Consensus 1005 ~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa--~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1005 KPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFA--LEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred EccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 6531 0 0235678999995 5699998763 468999994 688999999999998654
No 138
>PLN02242 methionine gamma-lyase
Probab=99.97 E-value=1.1e-28 Score=218.83 Aligned_cols=313 Identities=19% Similarity=0.199 Sum_probs=223.8
Q ss_pred cCCCCCChHHHHHHHHHcCCC----CCCccC--CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEE
Q 018240 9 RSDTVTKPTEAMRAAMASAEV----DDDVLM--HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVI 82 (359)
Q Consensus 9 ~~~~~~~~~~~~~~a~~~~~~----~~~~~~--~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl 82 (359)
.++++..|+++..+++..... ....|+ ..|...+||+.+++++|.+.+++++||++|+..++.+++ ++||+|+
T Consensus 41 ~s~t~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~Pt~~~LE~~lA~l~g~~~~l~~~sG~~Ai~~al~al~-~~GD~Vl 119 (418)
T PLN02242 41 ASATFTVMEPDTMRRMFSGELGPDRDFYIYSRHFNPTVLNLGRQMAALEGTEAAYCTASGMSAISSVLLQLC-SSGGHVV 119 (418)
T ss_pred cCCceecCCHHHHHHHhcccccccCCCccccCCCChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHh-CCCCEEE
Confidence 345667777777777765432 123566 478899999999999999999999999999999999988 5999999
Q ss_pred ecCCCcceeeccc--cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCC-ceeEEEEeccccCCCceecChhhH
Q 018240 83 LGDNSHIHIYENG--GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYP-TTRLICLENTHANCGGRCLSVEYT 159 (359)
Q Consensus 83 ~~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~v~i~~~~~~ptG~~~~~~~l 159 (359)
++.+.|....... ...+..|++++.++.. |++++++.++ + ++++|++++++ ||||.+.+ +
T Consensus 120 ~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~-----d~e~l~~~i~--------~~~tklV~lesp~-NPtG~v~d---l 182 (418)
T PLN02242 120 ASNTLYGGTHALLAHFLPRKCNITTTFVDIT-----DLEAVKKAVV--------PGKTKVLYFESIS-NPTLTVAD---I 182 (418)
T ss_pred EcCCcHHHHHHHHHHhhhhccCceEEEcCCC-----CHHHHHHhcC--------cCCCEEEEEecCC-CCCCcccC---H
Confidence 9999876654300 0123467777766543 8999999998 5 59999997655 59999886 8
Q ss_pred HHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCce---eeEEecCHHHHHHHHHHHHh--h
Q 018240 160 DSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV---GSVIVGSKEFIKKARRLRKT--L 234 (359)
Q Consensus 160 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~---gg~~~~~~~~~~~~~~~~~~--~ 234 (359)
++|+++|+++|+++|+|++|..+.. ....+ +.|+++.|+||+++++. ||++++++++++.++..... .
T Consensus 183 ~~I~~la~~~gi~livDea~~~~~~-----~~~~~--g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~ 255 (418)
T PLN02242 183 PELARIAHEKGVTVVVDNTFAPMVL-----SPARL--GADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALM 255 (418)
T ss_pred HHHHHHHHHhCCEEEEECCCCccCC-----CHHHc--CCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhh
Confidence 9999999999999999999643221 12222 68999999999997653 68999999998888766442 1
Q ss_pred CCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCC------------------ccceEEEEEe
Q 018240 235 GGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDA------------------VETNIVYFEI 296 (359)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~------------------~~~~~~~~~~ 296 (359)
..+..+.+..++.....++.... +++++.+++.++.+.|+++ ++++..|. ..+..+.|.+
T Consensus 256 ~~g~~~~~~~A~l~~~~l~tl~~-r~~~~~~~a~~la~~L~~~-~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l 333 (418)
T PLN02242 256 LLGPTMNPKVAFELSERLPHLSL-RMKEHCRRAMEYAKRMKEL-GLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDM 333 (418)
T ss_pred ccCCCCCHHHHHHHHcCCCcHHH-HHHHHHHHHHHHHHHHHhC-CCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEE
Confidence 22233455565555555554433 7788999999999999998 56665432 2456677888
Q ss_pred ccchHHHHHHHHHHHHhc----CceeccC---------------------------CCcEEEEEeCCCCCHH-HHHHHHH
Q 018240 297 TEDSKLYAACLLKKLEEH----GVLVMPE---------------------------SSTRVRIVVHHQISAN-DVHYTLS 344 (359)
Q Consensus 297 ~~~~~~~~~~~~~~l~~~----gi~~~~~---------------------------~~~~lRi~~~~~~~~~-~i~~~~~ 344 (359)
.. ...+..|.+.|+-- .+.+..+ ..+.+|+++. + | +.+.+++
T Consensus 334 ~~--~~~~~~f~~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvG--l--E~~~~dli~ 407 (418)
T PLN02242 334 DT--EERANRLMRYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVG--Y--TGTLEQRWS 407 (418)
T ss_pred CC--HHHHHHHHHHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEec--C--CCCHHHHHH
Confidence 64 24577888888622 2222111 1346999984 3 5 4888888
Q ss_pred HHHHHHHHHH
Q 018240 345 CFQKIYAGVC 354 (359)
Q Consensus 345 ~l~~~~~~~~ 354 (359)
.|++++++++
T Consensus 408 dl~~al~~~~ 417 (418)
T PLN02242 408 QFEKALSAMK 417 (418)
T ss_pred HHHHHHHHhh
Confidence 8888887653
No 139
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.97 E-value=1.3e-28 Score=221.37 Aligned_cols=333 Identities=14% Similarity=0.138 Sum_probs=214.3
Q ss_pred cccccccCCCCC-C--hHHHHHHHHHcCCCC------CCccCCChHHHHHHHHHHHHh----CC--C-CeEEcCCchH-H
Q 018240 3 TRTVDLRSDTVT-K--PTEAMRAAMASAEVD------DDVLMHDPTAFRLETEMAKVM----GK--E-AGLFVPSGTM-G 65 (359)
Q Consensus 3 ~~~id~~~~~~~-~--~~~~~~~a~~~~~~~------~~~~~~~~~~~~l~~~la~~~----~~--~-~~~~~~~gt~-a 65 (359)
...|||..+++. . |.+.+.+++.+.... ...|+...+..++++.+++++ |. + ..+++++|++ +
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~a 109 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSA 109 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHH
Confidence 346899887654 2 235666666553322 134777778899999999987 32 2 2366666655 5
Q ss_pred HHHHHHHhhh----hcCCeEEe-cCCCcceeeccc---cccccCCccceeeecCC-CCCCCHHHHHHHhcCCCCCccCCc
Q 018240 66 NLISVLVHCE----TRGSEVIL-GDNSHIHIYENG---GISTIGGVHPRTVKNNQ-DGTMDIDLIEAAIRDPKGEIVYPT 136 (359)
Q Consensus 66 ~~~~l~~~~~----~~g~~vl~-~~~~~~~~~~~~---~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~l~~~~~~~~~~~ 136 (359)
+..++..++. .+|+.|++ ..|+|......+ ......+..++.++.+. ++.+|++.|+ +. .+
T Consensus 110 l~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~--------~~ 179 (416)
T PRK09440 110 FFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID--------ED 179 (416)
T ss_pred HHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cC--------CC
Confidence 5555555553 25889999 699976543210 01111222232332211 3568988887 33 56
Q ss_pred eeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhc--CccEEE-EeccccCCCce
Q 018240 137 TRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQ--AADSAS-VCLSKGLGAPV 213 (359)
Q Consensus 137 ~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~--~~d~~~-~s~~K~~g~~~ 213 (359)
++++++.+ ++||||.+++.+++++|+++|++|+++||+||+|.. .. .......... ...+++ .|+||. +.|+
T Consensus 180 ~~~i~l~~-P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~--~~-~~~~~~~~~~~~~~~vI~~~SfSK~-~~pG 254 (416)
T PRK09440 180 TGAICVSR-PTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGP--PF-PGIIFSEATPLWNPNIILCMSLSKL-GLPG 254 (416)
T ss_pred ceEEEEec-CCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccc--cC-CCcchhhcCccccCCeEEEeccccc-CCCc
Confidence 78888855 567999999999999999999999999999999632 11 1111111111 123444 499996 5554
Q ss_pred e--eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHH-----hHHH-HhhhHHHHHHHHHHHHhcC-C--CceE
Q 018240 214 G--SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQE-----NVLV-MLDGDHKKAKLLAEGLNQL-K--GLRV 282 (359)
Q Consensus 214 g--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~-~~~~~~~~~~~l~~~l~~~-~--g~~~ 282 (359)
. ||+++++++++.+.........+. +.+.+.++...++. ...+ .+..+.++++.+.+.|.+. + ++.+
T Consensus 255 lRiG~~i~~~~l~~~~~~~~~~~~~~~--s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~ 332 (416)
T PRK09440 255 VRCGIVIADEEIIEALSNMNGIISLAP--GRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLI 332 (416)
T ss_pred ceEEEEeCCHHHHHHHHHHHHHhccCC--CcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEE
Confidence 3 999999999999887776655444 33344444444421 1111 3344566667777777653 2 3444
Q ss_pred ecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC-------------CcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 283 DVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES-------------STRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-------------~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
..+.+++++|+.++.. +.+..++.+.|.++||.+.|+. ..++||+++ .+++++++++++|+++
T Consensus 333 -~~p~gg~fiw~~~~~~-~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~--~~~~~l~~~i~~l~~~ 408 (416)
T PRK09440 333 -HKPEGAIFLWLWFKDL-PITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYV--QDDEEIEKGIAILAEE 408 (416)
T ss_pred -ecCCCceEEEEECCCC-CCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEec--CCHHHHHHHHHHHHHH
Confidence 2455789999998751 1356788899999999997752 137999996 4789999999999999
Q ss_pred HHHHHhh
Q 018240 350 YAGVCEE 356 (359)
Q Consensus 350 ~~~~~~~ 356 (359)
+++...+
T Consensus 409 ~~~~~~~ 415 (416)
T PRK09440 409 VEKAYAE 415 (416)
T ss_pred HHHHhhc
Confidence 9886543
No 140
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.97 E-value=3.3e-29 Score=220.33 Aligned_cols=307 Identities=22% Similarity=0.270 Sum_probs=225.1
Q ss_pred HHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccc
Q 018240 18 EAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGI 97 (359)
Q Consensus 18 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~ 97 (359)
++.++++.+...+......++...++|+.+++++|.++++.++|||.|+..++.++-.++|++|+++..++.++.. .
T Consensus 5 ~e~~~~v~~~l~s~~~~~~g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~---a 81 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLSTYGPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATAS---A 81 (363)
T ss_dssp HHHHHHHHHHHHHTCCSSSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHH---H
T ss_pred HHHHHHHHHHHHhCCccCCCHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHH---H
Confidence 4444555544333333333799999999999999999999999999999999999988899999999999877765 3
Q ss_pred cccCCccceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEe
Q 018240 98 STIGGVHPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 98 ~~~~g~~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
....|++++.++.+ +++.+|++.+++.++ +++++|++.|.. |... ++++|.++|+++|++||+|
T Consensus 82 i~~~G~~pv~~Di~~~~~~id~~~~~~~i~--------~~t~ai~~~h~~----G~~~---d~~~i~~~~~~~~i~lIeD 146 (363)
T PF01041_consen 82 ILWAGAEPVFVDIDPETLNIDPEALEKAIT--------PKTKAILVVHLF----GNPA---DMDAIRAIARKHGIPLIED 146 (363)
T ss_dssp HHHTT-EEEEE-BETTTSSB-HHHHHHHHH--------TTEEEEEEE-GG----GB------HHHHHHHHHHTT-EEEEE
T ss_pred HHHhccEEEEEeccCCcCCcCHHHHHHHhc--------cCccEEEEecCC----CCcc---cHHHHHHHHHHcCCcEEEc
Confidence 67789999999877 789999999999999 789999987755 4544 4899999999999999999
Q ss_pred cccccchhhhcCchhHhhhcCccEEEEe--ccccCCCceeeEEec-CHHHHHHHHHHHHh---------------hCCCc
Q 018240 177 GARIFNAAVALGVPVRRLVQAADSASVC--LSKGLGAPVGSVIVG-SKEFIKKARRLRKT---------------LGGGM 238 (359)
Q Consensus 177 ~a~~~~~~~~~~~~~~~~~~~~d~~~~s--~~K~~g~~~gg~~~~-~~~~~~~~~~~~~~---------------~~~~~ 238 (359)
.+|++|... .+.....+ .|+.++| .+|.+..+.||+++. ++++.++++.++.. .|.++
T Consensus 147 ~a~a~g~~~-~g~~~G~~---gd~~~fSf~~~K~i~~geGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~ 222 (363)
T PF01041_consen 147 AAQAFGARY-KGRPVGSF---GDIAIFSFHPTKIITTGEGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNF 222 (363)
T ss_dssp -TTTTT-EE-TTEETTSS---SSEEEEESSTTSSS-SSS-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-
T ss_pred cccccCcee-CCEeccCC---CCceEecCCCCCCCcCCCCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCccc
Confidence 999987754 44443333 4655555 469997767776666 67888888766542 34566
Q ss_pred chhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccc---eE--EEEEeccchHHHHHHHHHHHHh
Q 018240 239 RQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVET---NI--VYFEITEDSKLYAACLLKKLEE 313 (359)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~l~~ 313 (359)
+++.+.++.+...|++..+ +.++.+++++++.+.|++.+++.....+... .+ +.+.++.....+.+++.+.|.+
T Consensus 223 rm~~~~AAigl~QL~~L~~-~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~ 301 (363)
T PF01041_consen 223 RMSELQAAIGLAQLKRLDE-IIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRA 301 (363)
T ss_dssp B-BHHHHHHHHHHHHTHHH-HHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHHH
Confidence 7888888888989988766 8888899999999999999888654332222 22 3455554211357899999999
Q ss_pred cCceeccCC----------------------------CcEEEEEeCCCCCHHHHHHHHHHHH
Q 018240 314 HGVLVMPES----------------------------STRVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 314 ~gi~~~~~~----------------------------~~~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
+||.+.+.. ...+.+++++.+++++++++++.|+
T Consensus 302 ~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 302 RGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp TTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred CCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 999883321 1248899999999999999999885
No 141
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.97 E-value=1.8e-28 Score=220.42 Aligned_cols=330 Identities=20% Similarity=0.172 Sum_probs=223.1
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCCCC--------ccCCChHHHHHHH----HHHHHhCCCCe-EEcCCchHHHHHHH
Q 018240 4 RTVDLRSDTVTKPTEAMRAAMASAEVDDD--------VLMHDPTAFRLET----EMAKVMGKEAG-LFVPSGTMGNLISV 70 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~~~~~~~~l~~----~la~~~~~~~~-~~~~~gt~a~~~~l 70 (359)
..++|..+... ++|.+++++.+...... .+...+....+++ .+++++|.+.. ++++||++|+..++
T Consensus 26 ~~~~l~~~~n~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~al~~~l 104 (416)
T PRK00011 26 EHIELIASENF-VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQPHSGSQANAAVY 104 (416)
T ss_pred cCeeeecccCc-CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeecCCchHHHHHHH
Confidence 34666665444 56888888866432111 1112334455554 78999999876 66788999999988
Q ss_pred HHhhhhcCCeEEecCCCcceeeccccc--cccCCccceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEecccc
Q 018240 71 LVHCETRGSEVILGDNSHIHIYENGGI--STIGGVHPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHA 147 (359)
Q Consensus 71 ~~~~~~~g~~vl~~~~~~~~~~~~~~~--~~~~g~~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~ 147 (359)
.+++ ++||+|+++.++|.+.+..+.. ....|++++.++.+ .++.+|++++++.+++ .++++|++.+ ++
T Consensus 105 ~~l~-~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-------~~~k~v~~~~-~~ 175 (416)
T PRK00011 105 FALL-KPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALE-------HKPKLIIAGA-SA 175 (416)
T ss_pred HHhc-CCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHh-------cCCCEEEECC-Cc
Confidence 8887 6999999999998754321111 12335677777665 3578999999999973 4688888843 33
Q ss_pred CCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecC-HHHHHH
Q 018240 148 NCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGS-KEFIKK 226 (359)
Q Consensus 148 ~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~-~~~~~~ 226 (359)
+|...+ +++|.++|+++|+++|+|++|..|.... +.....+. +.|+++.|+||+++++.||+++++ +++.+.
T Consensus 176 --~~~~~~---~~~I~~la~~~~~~livD~a~~~g~~~~-g~~~~~~~-~~di~~~S~~K~l~g~~gg~i~~~~~~~~~~ 248 (416)
T PRK00011 176 --YSRPID---FKRFREIADEVGAYLMVDMAHIAGLVAA-GVHPSPVP-HADVVTTTTHKTLRGPRGGLILTNDEELAKK 248 (416)
T ss_pred --CCCccC---HHHHHHHHHHcCCEEEEECcchhccccc-CccCCCCC-CCcEEEecCCcCCCCCCceEEEeCCHHHHHH
Confidence 344444 8999999999999999999987655431 11112222 678999999999977778878874 788888
Q ss_pred HHHHHHhhCCCcchhHHHHHHHH---HHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHH
Q 018240 227 ARRLRKTLGGGMRQVGVLCAAAL---VALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLY 303 (359)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 303 (359)
++........+.......+++.. ..++...+++++++.++++++++.|++. |+++...+..++++|+.++. .+.+
T Consensus 249 l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~-~~~~ 326 (416)
T PRK00011 249 INSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVLVDLRS-KGLT 326 (416)
T ss_pred HHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEEEeCcc-cCCC
Confidence 76654332222211222222222 2223344557788899999999999998 88764322345888888864 2235
Q ss_pred HHHHHHHHHhcCceecc----C------CCcEEEEEeC----CCCCHHHHHHHHHHHHHHHHH
Q 018240 304 AACLLKKLEEHGVLVMP----E------SSTRVRIVVH----HQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 304 ~~~~~~~l~~~gi~~~~----~------~~~~lRi~~~----~~~~~~~i~~~~~~l~~~~~~ 352 (359)
..++.+.|.++||.+.. . .+..+|++.. ..++++|++++++.|+++++.
T Consensus 327 ~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 327 GKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred HHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 67899999999999852 1 2346898542 257899999999999998765
No 142
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.97 E-value=5.5e-29 Score=221.63 Aligned_cols=325 Identities=13% Similarity=0.132 Sum_probs=228.2
Q ss_pred CChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC---eEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcce
Q 018240 14 TKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA---GLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIH 90 (359)
Q Consensus 14 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~---~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~ 90 (359)
...++++++++.+....+......+...++++.+++++|.+. .+++++|++++..++..++ ++||+|+++++.|++
T Consensus 18 ~~~~~~V~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~-~~Gd~Vlv~~~~~~~ 96 (401)
T PLN02409 18 VNIPERVLRAMNRPNEDHRSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTL-SPGDKVVSFRIGQFS 96 (401)
T ss_pred CCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcC-CCCCEEEEeCCCchh
Confidence 333489999998754333222223455788888999999864 3777888888888888877 599999999988876
Q ss_pred eeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcC
Q 018240 91 IYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHG 170 (359)
Q Consensus 91 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~ 170 (359)
... ...++..|.+++.++.+.+..+|++++++.+++.. .+++++|+++++ +||||..+|.+++.++.+ |+++|
T Consensus 97 ~~~-~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~----~~~~k~v~~~~~-~~~tG~~~~~~~i~~l~~-~~~~g 169 (401)
T PLN02409 97 LLW-IDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDT----NHKIKAVCVVHN-ETSTGVTNDLAGVRKLLD-CAQHP 169 (401)
T ss_pred HHH-HHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCc----CCCccEEEEEee-cccccccCCHHHHHHHHh-hhccC
Confidence 532 13366779999999877666689999999998310 026889999555 559999999544444444 99999
Q ss_pred cEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHH------------h--hC
Q 018240 171 LKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRK------------T--LG 235 (359)
Q Consensus 171 ~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~------------~--~~ 235 (359)
+++|+|++|+.+... .....+ ++|+++.|.|||+++|.| |+++.+++..+.+..... . .+
T Consensus 170 ~~~vvD~v~s~g~~~---id~~~~--~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 244 (401)
T PLN02409 170 ALLLVDGVSSIGALD---FRMDEW--GVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLG 244 (401)
T ss_pred cEEEEEcccccCCcc---cccccc--CccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcC
Confidence 999999998664332 222223 789999999999988888 999999888877643110 0 11
Q ss_pred CC--cchhHHHHHHHHHHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCC--ccc-eEEEEEeccchHHHHHH
Q 018240 236 GG--MRQVGVLCAAALVAL----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDA--VET-NIVYFEITEDSKLYAAC 306 (359)
Q Consensus 236 ~~--~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~--~~~-~~~~~~~~~~~~~~~~~ 306 (359)
.. ..++.....+...++ +...+.+.++..++++++++.|+++ |+++..+. ..+ .+.++.++. +++..+
T Consensus 245 ~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~~~p~--~~~~~~ 321 (401)
T PLN02409 245 TYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAVVVPE--GIDSAE 321 (401)
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceEEEeCCC--CCCHHH
Confidence 00 011111222223333 3345556777888999999999988 88875432 123 345566653 357778
Q ss_pred HHHHH-HhcCceeccC----CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 307 LLKKL-EEHGVLVMPE----SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 307 ~~~~l-~~~gi~~~~~----~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+.+.| .++||.+..+ ....+||+....++.+++..++++|.+++.++.
T Consensus 322 l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 322 IVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred HHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 88888 7889998654 356799999889999999999999999998765
No 143
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.97 E-value=1.3e-28 Score=217.61 Aligned_cols=314 Identities=18% Similarity=0.191 Sum_probs=220.5
Q ss_pred HHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC----eEEcCCchHHHHHHHHHhhhhcCCeEEecCCCccee-
Q 018240 17 TEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA----GLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHI- 91 (359)
Q Consensus 17 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~----~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~- 91 (359)
.+++++++.... .+..-...+...++++.+++++|.+. .++++|||+++..++..+.. +++++++..+.+++.
T Consensus 15 ~~~v~~~~~~~~-~~~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~-~~~~vlv~~~~~~~~~ 92 (363)
T TIGR02326 15 SRTVKEAMLFDW-CTWDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVP-KDGKLLVVINGAYGAR 92 (363)
T ss_pred CHHHHHHhCCCC-CCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCC-CCCeEEEEeCChhhHH
Confidence 488888887743 22111123455788999999999863 36778899999999999884 777766544443433
Q ss_pred eccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCc
Q 018240 92 YENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGL 171 (359)
Q Consensus 92 ~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~ 171 (359)
+. ..++..|.+++.++.++++.+|++.+++.+++. ++++++.+.++ +||||...| +++|.++|+++|+
T Consensus 93 ~~--~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~------~~~~~v~~~~~-~~~tG~~~~---i~~I~~l~~~~g~ 160 (363)
T TIGR02326 93 IV--QIAEYLGIPHHVVDTGEVEPPDVVEVEAILAAD------PAITHIALVHC-ETTTGILNP---IEAVAKLAHRHGK 160 (363)
T ss_pred HH--HHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhC------CCccEEEEEee-cCCccccCc---HHHHHHHHHHcCC
Confidence 33 336778999999988888889999999999842 35667777454 559999988 7999999999999
Q ss_pred EEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHH------------h---hC
Q 018240 172 KLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRK------------T---LG 235 (359)
Q Consensus 172 ~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~------------~---~~ 235 (359)
++++|++|++|..+ .+...+ ++|+++.|+||++++|.| |+++.+++.++++..... . .+
T Consensus 161 ~livD~~~~~g~~~---~~~~~~--~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (363)
T TIGR02326 161 VTIVDAMSSFGGIP---IDIAEL--HIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHG 235 (363)
T ss_pred EEEEEccccccCcc---cchhhc--CccEEEecCccccccCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCC
Confidence 99999998776542 233333 689999999999977777 999998887766431000 0 00
Q ss_pred -CCcchhHHHHHHHHHHHH----H-hHHHHhhhHHHHHHHHHHHHhcCCCceEecCC-ccce-EEEEEeccchHHHHHHH
Q 018240 236 -GGMRQVGVLCAAALVALQ----E-NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDA-VETN-IVYFEITEDSKLYAACL 307 (359)
Q Consensus 236 -~~~~~~~~~~~~~~~~l~----~-~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 307 (359)
..+..+.....+...+++ . ..+.+.+++.++++++++.|+++ |+++..++ ..++ ..++.++.....+...+
T Consensus 236 ~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 314 (363)
T TIGR02326 236 KWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSPEDPDYRFADF 314 (363)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEECCCCCCCCHHHH
Confidence 001112222222233332 2 23446677888999999999998 88764332 2333 35677654212366789
Q ss_pred HHHHHhcCceeccCC---CcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 308 LKKLEEHGVLVMPES---STRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 308 ~~~l~~~gi~~~~~~---~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
.+.|.++||.+.++. ..++|+++...++.+++++++++|++++
T Consensus 315 ~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 315 YQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred HHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 999999999997764 4689999866789999999999998875
No 144
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.97 E-value=9.7e-29 Score=217.83 Aligned_cols=316 Identities=16% Similarity=0.117 Sum_probs=208.8
Q ss_pred ccccccCC-CCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCe-EEcCCchHHHHHHHHHhhhhcCCeE
Q 018240 4 RTVDLRSD-TVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAG-LFVPSGTMGNLISVLVHCETRGSEV 81 (359)
Q Consensus 4 ~~id~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-~~~~~gt~a~~~~l~~~~~~~g~~v 81 (359)
..|||..+ +...|++.+.+++.+.......|... ...++++.++++++.+.. +++++|++..+..+..++. +|+.|
T Consensus 23 ~~i~l~~~~n~~~~~~~~~~a~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l~-~g~~v 100 (360)
T PRK07392 23 AILDFSASINPLGPPESVIAAIQSALSALRHYPDP-DYRELRLALAQHHQLPPEWILPGNGAAELLTWAGRELA-QLRAV 100 (360)
T ss_pred cEEEeCCcCCCCCCCHHHHHHHHHHHHHhhcCCCc-CHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHhC-CCCeE
Confidence 35889887 44566688888887654333345543 357999999999987643 6666666544444444443 67899
Q ss_pred EecCCCcceeeccccccccCCccceeeecCCCCC-----CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecCh
Q 018240 82 ILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGT-----MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSV 156 (359)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-----~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~ 156 (359)
++++|+|.... ..++..|.+++.++.+.++. .+++++++.. .+++++++. .+|||||.+++.
T Consensus 101 lv~~P~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~-nP~NPTG~~~~~ 167 (360)
T PRK07392 101 YLITPAFGDYR---RALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL---------TPNDGLLLN-NPHNPTGKLWSR 167 (360)
T ss_pred EEECCCcHHHH---HHHHHcCCeEEEEecccccCCcccccCHHHHHHhc---------cCCCEEEEe-CCCCCCCCCcCH
Confidence 99999976644 34778899999998764443 3455554432 356778775 557799999995
Q ss_pred hhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHh-hhcCccEEEE-eccccCCCcee--eEEecCHHHHHHHHHHHH
Q 018240 157 EYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRR-LVQAADSASV-CLSKGLGAPVG--SVIVGSKEFIKKARRLRK 232 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~-~~~~~d~~~~-s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~ 232 (359)
++|.++++++++ +|+||+|..........+... +.....++++ |+||.||.|+- ||+++++++++.+.....
T Consensus 168 ---~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~~ 243 (360)
T PRK07392 168 ---EAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWRD 243 (360)
T ss_pred ---HHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhCC
Confidence 566677778885 666999643222111112222 2222235554 99999996544 999999998888764432
Q ss_pred hhCCCcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHH
Q 018240 233 TLGGGMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKK 310 (359)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (359)
. +..+.+.+.++...++ .+.+...+.+.++++++.+.|+.++++.+. +..++++|+.++. +..++.+.
T Consensus 244 ~----~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~--~~~~~fl~~~~~~----~~~~l~~~ 313 (360)
T PRK07392 244 P----WPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPL--PSAANFLLVQSQG----SALQLQEK 313 (360)
T ss_pred C----CCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC--CCCCCEEEEEcCC----CHHHHHHH
Confidence 1 2234455555555553 333334456777888999999988888764 3578899988764 56678877
Q ss_pred H-HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 311 L-EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 311 l-~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
| +++||.+.|+. .+++||++. +.++.+++.+.|++++.
T Consensus 314 ll~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 314 LLQQHRILIRDCLSFPELGDRYFRVAVR---TEAENQRLLEALAAILA 358 (360)
T ss_pred HHhhCCEEEEeCCCCCCCCCCEEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 6 78899997762 368999994 35556677777766543
No 145
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=2.3e-29 Score=220.64 Aligned_cols=304 Identities=14% Similarity=0.156 Sum_probs=212.6
Q ss_pred cccccCCCCCC-hHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCe-EEcCCch-HHHHHHHHHhhhhcC-Ce
Q 018240 5 TVDLRSDTVTK-PTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAG-LFVPSGT-MGNLISVLVHCETRG-SE 80 (359)
Q Consensus 5 ~id~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-~~~~~gt-~a~~~~l~~~~~~~g-~~ 80 (359)
.|+|+++.+.. |++.+ .. .....| +.+...++++.+++++|.+.. +++++|+ +++..++.+++ ++| +.
T Consensus 30 ~~~l~~Nenp~~~~~~~----~~--~~~~~Y-p~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~-~~g~~~ 101 (351)
T PRK01688 30 DVWLNANEYPTAVEFQL----TQ--QTLNRY-PECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFC-EPGKDA 101 (351)
T ss_pred ceEecCCCCCCCCChhh----cc--cccccC-CCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc-CCCCCE
Confidence 47787765554 33432 11 122234 334457999999999998653 6555555 56666666665 576 89
Q ss_pred EEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHH
Q 018240 81 VILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTD 160 (359)
Q Consensus 81 vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~ 160 (359)
|+++.|+|.. +. ..++..|++++.++.++++.+|++++++.++ ++++|++++ +|||||..++.++++
T Consensus 102 vli~~P~y~~-y~--~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~~---------~~~lv~l~n-PnNPTG~~~~~~~l~ 168 (351)
T PRK01688 102 ILYCPPTYGM-YS--VSAETIGVEIRTVPTLDNWQLDLPAIADNLD---------GVKVVYVCS-PNNPTGNLINPQDLR 168 (351)
T ss_pred EEEcCCCHHH-HH--HHHHHcCCEEEEeecCCCCCCCHHHHHHhcc---------CCcEEEEeC-CCCCCCCCCCHHHHH
Confidence 9999999755 44 3477889999999887778899999988764 578888865 566999999999999
Q ss_pred HHHHHHHHcCcEEEEecccccchhhhcCchhHhhh-cCccEEEE-eccccCCCcee--eEEecCHHHHHHHHHHHHhhCC
Q 018240 161 SVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV-QAADSASV-CLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGG 236 (359)
Q Consensus 161 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~d~~~~-s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~ 236 (359)
+|++.|++ +.+||+||+|.... ...+...+. ....++++ |+||.||.++- ||+++++++++.++.....+.
T Consensus 169 ~l~~~~~~-~~~vivDEay~~f~---~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~~- 243 (351)
T PRK01688 169 TLLELTRG-KAIVVADEAYIEFC---PQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIAPYP- 243 (351)
T ss_pred HHHHhCCC-CcEEEEECchhhcC---CCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhccCCCC-
Confidence 99999876 68899999964322 112222322 23355555 99999986543 889999999988776544332
Q ss_pred CcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHH
Q 018240 237 GMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLE 312 (359)
Q Consensus 237 ~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (359)
. +...+.++...++ ...++.++...+.++++.+.|++++++.... +..++|+|+.++ +..++.++|.
T Consensus 244 -v--~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-ps~~nfi~~~~~-----~~~~l~~~L~ 314 (351)
T PRK01688 244 -L--STPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVF-DSETNYILARFT-----ASSAVFKSLW 314 (351)
T ss_pred -C--CHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEC-CCCCcEEEEEcC-----CHHHHHHHHH
Confidence 2 2233334444453 2334455666778889999999887775323 458899999875 3568899999
Q ss_pred hcCceeccC-----CCcEEEEEeCCCCCHHHHHHHHHHH
Q 018240 313 EHGVLVMPE-----SSTRVRIVVHHQISANDVHYTLSCF 346 (359)
Q Consensus 313 ~~gi~~~~~-----~~~~lRi~~~~~~~~~~i~~~~~~l 346 (359)
++||.+.++ ..+++||+++ ++++++.++++|
T Consensus 315 ~~gi~vr~~~~~~~~~~~iRis~~---~~~e~~~l~~al 350 (351)
T PRK01688 315 DQGIILRDQNKQPGLSNCLRITIG---TREECQRVIDAL 350 (351)
T ss_pred HCCeEEEECCCcCCCCCeEEEeCC---CHHHHHHHHHhh
Confidence 999999653 2468999984 689999999887
No 146
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.1e-28 Score=217.14 Aligned_cols=283 Identities=18% Similarity=0.171 Sum_probs=202.1
Q ss_pred HHHHHHHHHHHHhCCCC-eEEcCCc-hHHHHHHHHHhhhhcC-CeEEecCCCcceeeccccccccCCccceeeecC--C-
Q 018240 39 TAFRLETEMAKVMGKEA-GLFVPSG-TMGNLISVLVHCETRG-SEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--Q- 112 (359)
Q Consensus 39 ~~~~l~~~la~~~~~~~-~~~~~~g-t~a~~~~l~~~~~~~g-~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~- 112 (359)
...++++.++++++.+. .+++++| ++++..++..++ .+| +.|++++|+|. .+. ..++..|.+++.++.. .
T Consensus 60 ~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~-~~g~~~vlv~~p~y~-~~~--~~~~~~g~~~~~v~~~~~~~ 135 (364)
T PRK04781 60 QPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALC-VPGRDAVLVTPPVFG-MYA--VCARLQNAPLVEVPLVDGAD 135 (364)
T ss_pred CHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhc-CCCCCeEEEcCCChH-HHH--HHHHHcCCEEEEEecCCCcc
Confidence 36899999999998865 3666665 556666666666 577 78999999854 454 3367789999999763 2
Q ss_pred CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH
Q 018240 113 DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR 192 (359)
Q Consensus 113 ~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~ 192 (359)
.+.+|++++.+.+.+ +++++|++++ +|||||.+++.+++.++++.|+ ++++||+||+|.... . ..+..
T Consensus 136 ~~~~d~~~l~~~~~~-------~~~~lv~l~~-p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~--~-~~~~~ 203 (364)
T PRK04781 136 GFHADVPAIVAAALA-------SNAKLVFLCS-PSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFS--D-VPSAV 203 (364)
T ss_pred CCCcCHHHHHHHHhc-------cCCeEEEEcC-CCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhc--C-CcchH
Confidence 345788888766543 6889999965 6679999999999999998885 478999999964322 1 11222
Q ss_pred hh-hcCccEEEE-eccccCCCcee--eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHH----hHHHHhhhHH
Q 018240 193 RL-VQAADSASV-CLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQE----NVLVMLDGDH 264 (359)
Q Consensus 193 ~~-~~~~d~~~~-s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~ 264 (359)
.+ .....++++ |+||.||.|+. ||+++++++++.++.....++. +...+.++...++. ...+.++++.
T Consensus 204 ~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~~~~----~~~~~~~a~~~l~~~~~~~~~~~~~~~~ 279 (364)
T PRK04781 204 GLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPYPV----PTPCAALAEQALSAPALAVTARRVAEVR 279 (364)
T ss_pred HHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhccCCCCC----CHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 22 222345555 99999996544 9999999999998776554332 22333344444432 2223555677
Q ss_pred HHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC-----CcEEEEEeCCCCCHHHH
Q 018240 265 KKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES-----STRVRIVVHHQISANDV 339 (359)
Q Consensus 265 ~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-----~~~lRi~~~~~~~~~~i 339 (359)
++++.+.+.|++++++.... +..++++|++++. ..++.+.|.++||.+.++. .+++||++. ++++.
T Consensus 280 ~~r~~l~~~L~~~~~~~~~~-p~~g~f~~~~~~~-----~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~~---~~~~~ 350 (364)
T PRK04781 280 AERERLHAALAQLPGVRRVY-PSQGNFLLVRFDD-----AEAAFQALLAAGVVVRDQRAAPRLSDALRITLG---TPEQN 350 (364)
T ss_pred HHHHHHHHHHHhCCCCCeEC-CCCCcEEEEEcCC-----HHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeCC---CHHHH
Confidence 88899999999887775323 4579999999863 4578889999999997653 468999984 68999
Q ss_pred HHHHHHHHHHH
Q 018240 340 HYTLSCFQKIY 350 (359)
Q Consensus 340 ~~~~~~l~~~~ 350 (359)
++++++|+++.
T Consensus 351 ~~l~~al~~~~ 361 (364)
T PRK04781 351 DRVLAALQRTQ 361 (364)
T ss_pred HHHHHHHHHHH
Confidence 99999998754
No 147
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.97 E-value=7.5e-29 Score=220.54 Aligned_cols=326 Identities=18% Similarity=0.181 Sum_probs=217.8
Q ss_pred ccccCCCCCChHHHHHHHHHcCCCC----CC---ccCCChHHHHHHHHH---HHHhCC--CC-eEEcCCchHHHHHHHHH
Q 018240 6 VDLRSDTVTKPTEAMRAAMASAEVD----DD---VLMHDPTAFRLETEM---AKVMGK--EA-GLFVPSGTMGNLISVLV 72 (359)
Q Consensus 6 id~~~~~~~~~~~~~~~a~~~~~~~----~~---~~~~~~~~~~l~~~l---a~~~~~--~~-~~~~~~gt~a~~~~l~~ 72 (359)
+.|.+...+.+++.+++++.+.... .. .|+ .+....+++.+ .+.++. +. .++++|+++++..++.+
T Consensus 1 ~yld~aa~~~~~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~ 79 (382)
T TIGR03403 1 VYLDNNATTMLDPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKG 79 (382)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHH
Confidence 3566766677777888888664321 11 111 12334555554 444554 23 35666777888888876
Q ss_pred hhh----hc-CCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEecccc
Q 018240 73 HCE----TR-GSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHA 147 (359)
Q Consensus 73 ~~~----~~-g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~ 147 (359)
+.. ++ +++|+++...|++.......++..|++++.++.++++.+|++++++.++ ++++++++.+ ++
T Consensus 80 ~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~--------~~t~lv~~~~-~~ 150 (382)
T TIGR03403 80 VYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAIT--------EKTALVSVMW-AN 150 (382)
T ss_pred HHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhcc--------cCCeEEEEEc-cc
Confidence 631 24 4689999988877654222245678899999888888899999999998 6788888855 55
Q ss_pred CCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHH--
Q 018240 148 NCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFI-- 224 (359)
Q Consensus 148 ~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~-- 224 (359)
||||..+| +++|.++|+++|+++++|+++..+... ..... .++|++++|+||++| |.| |+++.++...
T Consensus 151 n~tG~~~~---~~~I~~la~~~g~~~ivD~a~~~g~~~---~~~~~--~~~D~~~~s~~K~~g-p~G~g~l~vr~~~~~~ 221 (382)
T TIGR03403 151 NETGMIFP---IKEIGEICKERGVLFHTDAVQAIGKIP---VDVQK--AGVDFLSFSAHKFHG-PKGVGGLYIRKGVELT 221 (382)
T ss_pred CCCccccC---HHHHHHHHHHcCCEEEEechhhcCCCc---cCccc--cCCCEEEEcchhhCC-CCceEEEEECCCCCCC
Confidence 59999998 789999999999999999998654332 12222 378999999999876 555 7776554331
Q ss_pred HHHH---HHHHhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCC--ccceEEEEEe
Q 018240 225 KKAR---RLRKTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDA--VETNIVYFEI 296 (359)
Q Consensus 225 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~--~~~~~~~~~~ 296 (359)
..+. .......++.....+ .++..++ .+..+...++..+.++++.+.|+++|++.+..+. ...+++.+.+
T Consensus 222 p~~~g~~~~~~~~~gt~~~~~~--~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 299 (382)
T TIGR03403 222 PLFHGGEHMGGRRSGTLNVPYI--VAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISI 299 (382)
T ss_pred CcccCCCCCCCcccCCcChHHH--HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEe
Confidence 0000 000001111211222 1222233 3334445567778889999999998899886432 1245667777
Q ss_pred ccchHHHHHHHHHHHHhcCceeccCC-----------------------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 297 TEDSKLYAACLLKKLEEHGVLVMPES-----------------------STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 297 ~~~~~~~~~~~~~~l~~~gi~~~~~~-----------------------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+. .+..++.+.|.++||.+..+. ...+|+++++.++++|++++++.|+++++++
T Consensus 300 ~~---~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~ 376 (382)
T TIGR03403 300 KG---VEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRL 376 (382)
T ss_pred CC---CCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 64 467788888989999996431 2469999999999999999999999999887
Q ss_pred Hh
Q 018240 354 CE 355 (359)
Q Consensus 354 ~~ 355 (359)
+.
T Consensus 377 ~~ 378 (382)
T TIGR03403 377 RA 378 (382)
T ss_pred Hh
Confidence 64
No 148
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.97 E-value=7.4e-29 Score=220.58 Aligned_cols=319 Identities=17% Similarity=0.185 Sum_probs=220.2
Q ss_pred cccCCCCC-ChHHHHHHHHHcCCCCC---Cc---cCC----ChHHHHHHHHHHHHhCCCC---eEEcCCchHHHHHHHHH
Q 018240 7 DLRSDTVT-KPTEAMRAAMASAEVDD---DV---LMH----DPTAFRLETEMAKVMGKEA---GLFVPSGTMGNLISVLV 72 (359)
Q Consensus 7 d~~~~~~~-~~~~~~~~a~~~~~~~~---~~---~~~----~~~~~~l~~~la~~~~~~~---~~~~~~gt~a~~~~l~~ 72 (359)
.|.+.... .+++.+.+++.+..... .. |.. .+...++++.+++++|.+. .++++|+++++..++.+
T Consensus 2 yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~ 81 (376)
T TIGR01977 2 YFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKG 81 (376)
T ss_pred CccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHh
Confidence 45554433 34466776665532211 11 211 2556899999999999863 36667888898888888
Q ss_pred hhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018240 73 HCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
++ ++|++|+++.++|.+..... ..++..|.+++.++.+.++.+|++++++.++ +++++|++++ ++||||
T Consensus 82 ~~-~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~--------~~~~~v~~~~-~~n~tG 151 (376)
T TIGR01977 82 LL-KEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIK--------TNTKLIVVSH-ASNVTG 151 (376)
T ss_pred cc-CCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcC--------CCCeEEEEEC-CCCCcc
Confidence 66 58999999999987764310 1244568899988877778899999999997 6788999865 555999
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEec-CHHHHHHHHH
Q 018240 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVG-SKEFIKKARR 229 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~-~~~~~~~~~~ 229 (359)
..+| +++|.++|+++|+++|+|++|++|.... .... .++|++++|+||++++|.| |+++. ++..+..+..
T Consensus 152 ~~~~---~~~i~~l~~~~~~~livD~a~~~g~~~~---~~~~--~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~ 223 (376)
T TIGR01977 152 TILP---IEEIGELAQENGIFFILDAAQTAGVIPI---DMTE--LAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKS 223 (376)
T ss_pred ccCC---HHHHHHHHHHcCCEEEEEhhhccCccCC---Cchh--cCCCEEEecccccccCCCCceEEEEcCCcCcCceec
Confidence 9998 7889999999999999999997766531 1222 3799999999999988876 55544 4331111110
Q ss_pred H---------------H-HhhCCCcchhHHHHHHHHHHHHH----hHHHHhhhHHHHHHHHHHHHhcCCCceEecCC---
Q 018240 230 L---------------R-KTLGGGMRQVGVLCAAALVALQE----NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDA--- 286 (359)
Q Consensus 230 ~---------------~-~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~--- 286 (359)
. . ....++. +.....+...+++. ..+...++..++++++.+.|++.+++++..+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~r~~~~t~--~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~ 301 (376)
T TIGR01977 224 GGTGSHSALIDQPSELPDRFESGTL--NTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPA 301 (376)
T ss_pred CCCccccccccccccchhhccCCCC--CHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCcc
Confidence 0 0 0001111 11222222333432 23345667788899999999988888875431
Q ss_pred ccceEEEEEeccchHHHHHHHHHHHHhc-CceeccC--------------CCcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018240 287 VETNIVYFEITEDSKLYAACLLKKLEEH-GVLVMPE--------------SSTRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~--------------~~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
...+++++.++. .+..++.+.|.++ ||.+..+ ....+|++++..++++|+++++++|++
T Consensus 302 ~~~~~v~~~~~~---~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 302 NRVGVVSFTVEG---IDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred ccCCeEEEEECC---CCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 135677778764 4778899999765 9988543 346899999999999999999999975
No 149
>PRK08637 hypothetical protein; Provisional
Probab=99.97 E-value=4.3e-28 Score=215.64 Aligned_cols=322 Identities=14% Similarity=0.044 Sum_probs=213.4
Q ss_pred HHHHHHHHHcCC-CCCCccCCChHHHHHHHHHHHHhCC-----C----CeEEcCCc-hHHHHHHHHHhhhhcCCeEEecC
Q 018240 17 TEAMRAAMASAE-VDDDVLMHDPTAFRLETEMAKVMGK-----E----AGLFVPSG-TMGNLISVLVHCETRGSEVILGD 85 (359)
Q Consensus 17 ~~~~~~a~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~-----~----~~~~~~~g-t~a~~~~l~~~~~~~g~~vl~~~ 85 (359)
.+.+.+++.+.. .....|+..++...+++.+++++.. . ..+++++| ++++..++..++ ++||.|++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vlv~~ 100 (388)
T PRK08637 22 LSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFV-DQGDTVLLPD 100 (388)
T ss_pred HHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhc-CCCCEEEEcC
Confidence 377777776632 1244577788899999999987631 1 12455555 556666666666 6999999999
Q ss_pred CCcceeeccccccccCCccceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHH
Q 018240 86 NSHIHIYENGGISTIGGVHPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGE 164 (359)
Q Consensus 86 ~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~ 164 (359)
|+|..... ......|.+++.++.. +++.+|++++++.++... .+.+.+++.+.+|||||.+++.+++++|++
T Consensus 101 P~y~~~~~--~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~-----~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~ 173 (388)
T PRK08637 101 HNWGNYKL--TFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAY-----NKGKVIVILNFPNNPTGYTPTEKEATAIVE 173 (388)
T ss_pred CCCccHHH--HHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhc-----cCCCEEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 99766443 1234578899998863 556789999999887110 233444444667889999999999999999
Q ss_pred HHHH-----cCcEEEEecccccchhhhcCchh----Hhhhc-CccE--EEE-eccccCCCcee--eEEec------CHHH
Q 018240 165 IAKK-----HGLKLHIDGARIFNAAVALGVPV----RRLVQ-AADS--ASV-CLSKGLGAPVG--SVIVG------SKEF 223 (359)
Q Consensus 165 ~~~~-----~~~~li~D~a~~~~~~~~~~~~~----~~~~~-~~d~--~~~-s~~K~~g~~~g--g~~~~------~~~~ 223 (359)
+|++ |+++||+||+|.... +.+... ..+.. ...+ +.+ |+||.++.|+. ||++. ++++
T Consensus 174 ~~~~~~~~~~~~~iI~De~Y~~l~--~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l 251 (388)
T PRK08637 174 AIKELADAGTKVVAVVDDAYFGLF--YEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTV 251 (388)
T ss_pred HHHHHHhcCCcEEEEecccchhcc--cCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHH
Confidence 8875 899999999964322 222211 12211 1133 333 99999876654 87774 3677
Q ss_pred HHHHHHHHH-hh-CCCcchhHHHHHHHHHHHH-----HhHHHHhhhHHHHHHHHHHHHhcC---CCceEecCCccceEEE
Q 018240 224 IKKARRLRK-TL-GGGMRQVGVLCAAALVALQ-----ENVLVMLDGDHKKAKLLAEGLNQL---KGLRVDVDAVETNIVY 293 (359)
Q Consensus 224 ~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~~~~~~~ 293 (359)
.+.+..... .. ......+.+.+.++...++ ....+.+..+.++.+.+.+.|++. +++.+. ++..+.++|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~-~~~~g~~~~ 330 (388)
T PRK08637 252 KEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAY-PFNSGYFMC 330 (388)
T ss_pred HHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccc-cccceEEEE
Confidence 777653221 10 1111223444455544442 222223344666677777777664 245553 345788899
Q ss_pred EEeccchHHHHHHHHHHH-HhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 294 FEITEDSKLYAACLLKKL-EEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 294 ~~~~~~~~~~~~~~~~~l-~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
++++. .+..++.++| +++||.+.+.+.+++|++++ ..+++++++++++|.++++++
T Consensus 331 ~~l~~---~~~~~l~~~l~~~~gv~~~~~~~~~iRi~~~-~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 331 LKLKG---VDAEELRVHLLEKYGIGTIALNETDLRIAFS-CVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred ecCCh---HHHHHHHHHHhhhcceEEEeccCCceEEEee-cCCHHHHHHHHHHHHHHHHhc
Confidence 99863 4778899998 67899987777789999997 478999999999999998765
No 150
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.97 E-value=2.7e-28 Score=217.37 Aligned_cols=320 Identities=16% Similarity=0.173 Sum_probs=221.2
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCc---cCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDV---LMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.+++||.++ +....+|.+.+++.+....... ....+...+++++++++.+.+.+++++||++|+..++..+..
T Consensus 40 ~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~SGseA~e~Alk~a~~ 119 (396)
T PRK04073 40 NRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARR 119 (396)
T ss_pred CEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcCCCCeEEEcCChHHHHHHHHHHHHH
Confidence 357898876 3334558888888775443211 224566788999999998888889999999999999998863
Q ss_pred h--------cC-CeEEecC-CCcceeeccccccccCCc------------cceeeecCCCCCCCHHHHHHHhcCCCCCcc
Q 018240 76 T--------RG-SEVILGD-NSHIHIYENGGISTIGGV------------HPRTVKNNQDGTMDIDLIEAAIRDPKGEIV 133 (359)
Q Consensus 76 ~--------~g-~~vl~~~-~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~ 133 (359)
. ++ ++|+... ..|..+.. + ....+. .+..++.+ |++++++.++
T Consensus 120 ~~~~~~g~~~~r~~ii~~~~~~HG~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~i~------- 184 (396)
T PRK04073 120 WAYDVKGVEPNKAEIIACEGNFHGRTMA--A-VSLSSEEEYKRGFGPMLPGIKKIPYG-----DLEALKAAIT------- 184 (396)
T ss_pred HhhhccCCCCCCCEEEEECCCcCCCCHH--H-HhhcCCcccccCCCCCCCCceEeCCC-----CHHHHHHhcc-------
Confidence 1 23 4566554 45544432 1 222111 11223322 7899999887
Q ss_pred CCceeEEEEeccccCCCceecCh-hhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH-h-hhcCccEEEEeccccCC
Q 018240 134 YPTTRLICLENTHANCGGRCLSV-EYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR-R-LVQAADSASVCLSKGLG 210 (359)
Q Consensus 134 ~~~~~~v~i~~~~~~ptG~~~~~-~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~-~-~~~~~d~~~~s~~K~~g 210 (359)
+++++|+++++ +||+|..++. +++++|.++|++||+++|+||+|.. +...+.... . ....+|++ +++|.+|
T Consensus 185 -~~~~~viiep~-~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g--~g~~g~~~~~~~~~~~pdi~--~~sK~lg 258 (396)
T PRK04073 185 -PNTAAFLVEPI-QGEAGINIPPEGFLKAARELCKEENVLFIADEIQTG--LGRTGKLFACDWDNVTPDMY--ILGKALG 258 (396)
T ss_pred -cCeEEEEEcCc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhC--CCcCcHHHHhhhcCCCCCEE--Eeccccc
Confidence 67888988664 4599998775 5799999999999999999999863 222232111 1 11245655 4679997
Q ss_pred Ccee--eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhcCCCce-EecCC
Q 018240 211 APVG--SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQLKGLR-VDVDA 286 (359)
Q Consensus 211 ~~~g--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~~ 286 (359)
++.. |++++++++.+.+... ..+.++..+++.++++..+++... +...++..++.+++.+.|+++ +.. +...+
T Consensus 259 ~gg~~ig~~~~~~~i~~~~~~~--~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l-~~~~i~~~~ 335 (396)
T PRK04073 259 GGVFPISCVAANRDILGVFTPG--SHGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEI-DNPMIKEVR 335 (396)
T ss_pred CCCCcceEEEEcHHHHhhhcCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh-cCCccccee
Confidence 6532 7888899988876432 233344456677777777776442 235566777889999999886 321 11113
Q ss_pred ccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 287 VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
..+.++++.+.. +..++.++|.++||.+.+.+..++|++++..++++++++++++|++++
T Consensus 336 ~~g~~~~~~~~~----~~~~~~~~l~~~Gv~~~~~~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 336 GRGLFIGVELNE----PARPYCEALKEEGLLCKETHETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred cceEEEEEEecc----hHHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 457778888764 567899999999999987777899999988999999999999998875
No 151
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.97 E-value=2.8e-28 Score=215.96 Aligned_cols=324 Identities=19% Similarity=0.229 Sum_probs=227.3
Q ss_pred CCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC----eEEcCCchHHHHHHHHHhhhhcCCeEEecC
Q 018240 10 SDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA----GLFVPSGTMGNLISVLVHCETRGSEVILGD 85 (359)
Q Consensus 10 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~----~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~ 85 (359)
+.-+..+.+.++++|.+.. ++..........++++.+++++|.+. .++++||++++..++.++. .+++.+++..
T Consensus 10 ~pgP~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~-~~~~~vlv~~ 87 (368)
T PRK13479 10 TPGPLTTSRTVREAMLRDW-GSWDDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV-PRDGKVLVPD 87 (368)
T ss_pred cCCCCCCCHHHHHHhCCCC-CCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc-CCCCeEEEEe
Confidence 3344555699999997753 33221123467899999999999863 2477899999999999998 5888888877
Q ss_pred CCcceee-ccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHH
Q 018240 86 NSHIHIY-ENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGE 164 (359)
Q Consensus 86 ~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~ 164 (359)
+.+++.. . ..++..|++++.++.++++.+|++++++.+++. +++++|++.+ ++||||...| +++|.+
T Consensus 88 ~~~~~~~~~--~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~------~~~~~v~~~~-~~~~tG~~~~---~~~i~~ 155 (368)
T PRK13479 88 NGAYGARIA--QIAEYLGIAHVVLDTGEDEPPDAAEVEAALAAD------PRITHVALVH-CETTTGILNP---LDEIAA 155 (368)
T ss_pred CCchHHHHH--HHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhC------CCCcEEEEEc-ccCccccccC---HHHHHH
Confidence 7766543 2 236778999999988777788999999998731 4567788755 4559999988 789999
Q ss_pred HHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHHhh---------
Q 018240 165 IAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRKTL--------- 234 (359)
Q Consensus 165 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~--------- 234 (359)
+|+++|+++|+|+++.++... .+...+ ++|+++.|++|++++|.| |+++.++++++.+......+
T Consensus 156 l~~~~~~~livDa~~~~g~~~---~~~~~~--~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (368)
T PRK13479 156 VAKRHGKRLIVDAMSSFGAIP---IDIAEL--GIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLDLYDQWA 230 (368)
T ss_pred HHHHcCCEEEEEcccccCCcc---cccccc--CceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeeecHHHHHh
Confidence 999999999999987665432 222222 688888999999877777 99999998887754321110
Q ss_pred -----CCC-cchhHHHHHHHHHHH----HH-hHHHHhhhHHHHHHHHHHHHhcCCCceEecCCc-cceE-EEEEeccchH
Q 018240 235 -----GGG-MRQVGVLCAAALVAL----QE-NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV-ETNI-VYFEITEDSK 301 (359)
Q Consensus 235 -----~~~-~~~~~~~~~~~~~~l----~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~-~~~~-~~~~~~~~~~ 301 (359)
+.. +..+.....+...++ +. ..++..+++.++++++++.|+++ |+++..++. ..+. ..+.++....
T Consensus 231 ~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 309 (368)
T PRK13479 231 YMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFHAPADPA 309 (368)
T ss_pred hhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEECCCCCC
Confidence 000 011212222222222 22 24446677888999999999998 887643321 2222 3344443222
Q ss_pred HHHHHHHHHHHhcCceeccCC---CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 302 LYAACLLKKLEEHGVLVMPES---STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 302 ~~~~~~~~~l~~~gi~~~~~~---~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.+..++.++|.++||.+.++. ..++|++....+++++++.++++|+++++++
T Consensus 310 ~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 310 YDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred cCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 466789999999999997653 3479999765789999999999999998765
No 152
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.97 E-value=3.7e-28 Score=215.35 Aligned_cols=289 Identities=18% Similarity=0.188 Sum_probs=214.6
Q ss_pred ccC--CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeee
Q 018240 33 VLM--HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVK 109 (359)
Q Consensus 33 ~~~--~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~ 109 (359)
.|+ .++...+||+.+++++|.+.+++++||+.|+..++.+++ ++||+|+++.+.|.+.+... ..+...|++++.++
T Consensus 57 ~Y~r~~~p~~~~Le~~iA~~~g~~~~l~~~sG~~Ai~~al~~ll-~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd 135 (400)
T PRK06234 57 IYSRLGNPTSTEVENKLALLEGGEAAVVAASGMGAISSSLWSAL-KAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVD 135 (400)
T ss_pred cccCCCCccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHh-CCCCEEEEecCccchHHHHHHHHHhhCCeEEEEEC
Confidence 365 578899999999999999988999999999998888887 59999999999887655300 11456788888887
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc--CcEEEEecccccchhhhc
Q 018240 110 NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH--GLKLHIDGARIFNAAVAL 187 (359)
Q Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~--~~~li~D~a~~~~~~~~~ 187 (359)
.. |++++++.++ +++++|+++++ +||||.+.+ +++|.++|+++ |+++|+|++|..+..
T Consensus 136 ~~-----d~e~l~~~i~--------~~tklI~iesP-~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~--- 195 (400)
T PRK06234 136 TS-----NLEEVRNALK--------ANTKVVYLETP-ANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYI--- 195 (400)
T ss_pred CC-----CHHHHHHHhc--------cCCeEEEEECC-CCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhc---
Confidence 54 8999999998 78999999765 559999887 89999999997 999999999754322
Q ss_pred CchhHhhhcCccEEEEeccccCCCce---eeEEecCHHHHHHHHHH--HHhhCCCcchhHHHHHHHHHHHHHhHHHHhhh
Q 018240 188 GVPVRRLVQAADSASVCLSKGLGAPV---GSVIVGSKEFIKKARRL--RKTLGGGMRQVGVLCAAALVALQENVLVMLDG 262 (359)
Q Consensus 188 ~~~~~~~~~~~d~~~~s~~K~~g~~~---gg~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 262 (359)
.. ++..++|+++.|++|+++++. ||++++++++++.++.. ....+.. .++..++.+..+++.... ++++
T Consensus 196 ~~---~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~--l~p~~a~l~~~~l~tl~~-r~~~ 269 (400)
T PRK06234 196 QR---PLQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSV--IGPFEAFLIIRGMKTLQI-RMEK 269 (400)
T ss_pred CC---chhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCC--CCHHHHHHHHhccCcHHH-HHHH
Confidence 22 122378999999999998654 58999999888887643 2233433 466777777777776554 7788
Q ss_pred HHHHHHHHHHHHhcCCCce-EecCC---------------ccceEEEEEeccchHHHHHHHHHHHHhcCceeccC-----
Q 018240 263 DHKKAKLLAEGLNQLKGLR-VDVDA---------------VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE----- 321 (359)
Q Consensus 263 ~~~~~~~l~~~l~~~~g~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----- 321 (359)
..+++.++.+.|++.|.+. +..|. ..+.++.|.++.. .....+|.+.|+-.++.+.-|
T Consensus 270 ~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~-~~~~~~f~~~l~~~~~~~s~G~~~sl 348 (400)
T PRK06234 270 HCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGG-VEEGKVVMNNVKLATLAVSLGDAETL 348 (400)
T ss_pred HHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCc-HHHHHHHHHhCCcceEeccCCCCCce
Confidence 8899999999999876653 22221 2466778888642 235678888886555444111
Q ss_pred ----------------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 322 ----------------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 322 ----------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.++.+|+++. + |+.+++++.|.++++.+
T Consensus 349 ~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svG--l--E~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 349 IQHPASMTHSPYTAEERKEAGISDGLVRLSVG--L--EDVDDIIADLKQALDLI 398 (400)
T ss_pred ecCCccCCCCCCCHHHHHhcCCCCCeEEEEeC--C--CCHHHHHHHHHHHHHHH
Confidence 2356999985 3 56777777777777654
No 153
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.97 E-value=1.4e-28 Score=213.32 Aligned_cols=295 Identities=17% Similarity=0.168 Sum_probs=210.2
Q ss_pred HHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHHhhhhcCCeEEec---CCCcceee
Q 018240 18 EAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLVHCETRGSEVILG---DNSHIHIY 92 (359)
Q Consensus 18 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~---~~~~~~~~ 92 (359)
|.+.++..++.... -+..+.+.++++.+++++|. +..++++||++|+..++.++. ++||+|+++ .|+|.+..
T Consensus 36 ~~~~~~~~~~~~~~--~g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~-~~gd~Vli~~~d~p~~~s~~ 112 (346)
T TIGR03576 36 FKIDEEDLELLETY--VGPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALE-PPGRKVVHYLPEKPAHPSIP 112 (346)
T ss_pred hhHHHHHHHHHHHh--cCCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhC-CCCCEEEECCCCCCCchhHH
Confidence 77777766643222 15568889999999999999 667899999999999999988 599999864 56776654
Q ss_pred ccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcE
Q 018240 93 ENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLK 172 (359)
Q Consensus 93 ~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~ 172 (359)
. + +++.|++++.+ + ++++++. . +++++|+++. . +++|.+++.+++++|+++|+++|++
T Consensus 113 ~-~--~~l~ga~~~~~--~-----~l~~l~~--~--------~~~~lIiitg-~-s~~G~v~~~~~L~~i~~la~~~~~~ 170 (346)
T TIGR03576 113 R-S--CKLAGAEYFES--D-----ELSELKK--I--------DGTSLVVITG-S-TMDLKVVSEEDLKRVIKQAKSKEAI 170 (346)
T ss_pred H-H--HHHcCCEEecc--C-----CHHHHhh--C--------cCceEEEEEC-C-CCCCcccCHHHHHHHHHHHHHcCCE
Confidence 3 3 77778765332 1 4555322 1 4577888843 3 5889999999999999999999999
Q ss_pred EEEecccccchhhhcCc-hhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHH
Q 018240 173 LHIDGARIFNAAVALGV-PVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVA 251 (359)
Q Consensus 173 li~D~a~~~~~~~~~~~-~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (359)
+++||+|+.+.....+. +... .+.|+++.|+||++++..+||+++++++++.++.....+..+. ++..++++..+
T Consensus 171 livDEAy~~~~~~~~~~~~~~~--~~~divv~s~SKalaG~r~G~v~~~~~li~~l~~~~~~~~~s~--~~~~~~aa~~a 246 (346)
T TIGR03576 171 VLVDDASGARVRRLYGQPPALD--LGADLVVTSTDKLMDGPRGGLLAGRKELVDKIKSVGEQFGLEA--QAPLLAAVVRA 246 (346)
T ss_pred EEEECCccccccccCCCCCHHH--cCCcEEEeccchhccccceEEEEeCHHHHHHHHHhhcCcccCc--cHHHHHHHHHH
Confidence 99999987754332222 1122 2568888899998855678999999999999888777666543 44566667777
Q ss_pred HHHh-HHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC-----CcE
Q 018240 252 LQEN-VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES-----STR 325 (359)
Q Consensus 252 l~~~-~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-----~~~ 325 (359)
++.. .+..++.+.++.+.+.+.++++ .+. +...+|+|++++.. -+.+.+.+.|.++||.++|+. .++
T Consensus 247 L~~~~~~~~~~~l~~r~~~~~~~l~~~---~~~--~~~~~f~~~~~~~~--~~~~~~~~ll~~~gV~v~~~~~f~~~~~~ 319 (346)
T TIGR03576 247 LEEFELSRIRDAFKRKEEVYLRLFDKL---NVE--RTPTGFVIKGVEEE--KLIEIGLDLLRNYGIITITAVGMPGASKT 319 (346)
T ss_pred HhhccHHHHHHHHHHHHHHHHHHHHhC---CCC--cCCCeEEEEeCCCC--CHHHHHHHHHHhCCEEEeCCcccCCCCCe
Confidence 7543 2334556667777777777643 332 23566899988641 023445555589999998853 568
Q ss_pred EEEEeCCCCCHH---HHHHHHHHHHHHH
Q 018240 326 VRIVVHHQISAN---DVHYTLSCFQKIY 350 (359)
Q Consensus 326 lRi~~~~~~~~~---~i~~~~~~l~~~~ 350 (359)
+||++. .+++ +.+.++++|++.+
T Consensus 320 vRis~~--~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 320 LRFDLA--AKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred EEEEEe--cChHHhcCHHHHHHHHHhcc
Confidence 999993 4444 7999999998754
No 154
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.97 E-value=2.8e-28 Score=216.54 Aligned_cols=321 Identities=18% Similarity=0.191 Sum_probs=224.2
Q ss_pred cCCCCCChHHHHHHHHHcCCCC----CCccC-CChHHHHHHHHHHHHhCCCC--eEEcCCchHHHHHHHHHhhh---hcC
Q 018240 9 RSDTVTKPTEAMRAAMASAEVD----DDVLM-HDPTAFRLETEMAKVMGKEA--GLFVPSGTMGNLISVLVHCE---TRG 78 (359)
Q Consensus 9 ~~~~~~~~~~~~~~a~~~~~~~----~~~~~-~~~~~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l~~~~~---~~g 78 (359)
.++..+.|+|.+.+++.+.... ...+. ......++++.+++++|.+. .+++++|++++..++..+.. +++
T Consensus 25 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~ 104 (371)
T PRK13520 25 LSSMCTEPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEK 104 (371)
T ss_pred eeeeecCchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCC
Confidence 4455677888888888553322 11121 12234788999999999864 47888999999998877653 247
Q ss_pred CeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhh
Q 018240 79 SEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEY 158 (359)
Q Consensus 79 ~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~ 158 (359)
++|+++++.|++..+ .++..|.+++.++.+.++.+|+++|++.++ +++++|++.+ .+|+||.+.|
T Consensus 105 ~~vl~~~~~h~s~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~--------~~~~~vi~~~-~~~~tG~~~~--- 169 (371)
T PRK13520 105 PNIVVPESAHFSFDK---AADMLGVELRRAPLDDDYRVDVKAVEDLID--------DNTIGIVGIA-GTTELGQVDP--- 169 (371)
T ss_pred ceEEecCcchHHHHH---HHHHcCceEEEecCCCCCcCCHHHHHHHHh--------hCCEEEEEEc-CCcCCcccCC---
Confidence 899999999988554 367778899989887788899999999998 5676666645 4569999887
Q ss_pred HHHHHHHHHHcCcEEEEecccccchhhhcCch-hHhh-hcCccEEEEeccccCCCc--eeeEEecCHHHHHHHHHHHHhh
Q 018240 159 TDSVGEIAKKHGLKLHIDGARIFNAAVALGVP-VRRL-VQAADSASVCLSKGLGAP--VGSVIVGSKEFIKKARRLRKTL 234 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~-~~~~-~~~~d~~~~s~~K~~g~~--~gg~~~~~~~~~~~~~~~~~~~ 234 (359)
+++|.++|+++|+++++|++|+.+........ .... ..++|.+++|.+|+.++| .|++++.++++.+.+.......
T Consensus 170 l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~~~~~~ 249 (371)
T PRK13520 170 IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDESYLDALAVDTPYL 249 (371)
T ss_pred HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEEEcCHHHHHhhcccCccc
Confidence 89999999999999999999865443211110 0111 136789999999987543 4456666777776654211111
Q ss_pred CCCc------chhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHH
Q 018240 235 GGGM------RQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYA 304 (359)
Q Consensus 235 ~~~~------~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (359)
.... ..++....++..+++ ...++..++..++++++.+.|+++ |+++... ...+++.+.++ +.
T Consensus 250 ~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~v~~~~~-----~~ 322 (371)
T PRK13520 250 TSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEPVIE-PVLNIVAFDDP-----NP 322 (371)
T ss_pred cCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCceEEEEecC-----CH
Confidence 1100 011222333344442 334446777888999999999998 8884333 35667777664 35
Q ss_pred HHHHHHHHhcCceeccCC-CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 305 ACLLKKLEEHGVLVMPES-STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 305 ~~~~~~l~~~gi~~~~~~-~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.++.++|.++||.+.... ..++|+++++.++++|++++++.|+++++
T Consensus 323 ~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 323 DEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred HHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 689999988899986643 56799999888999999999999998764
No 155
>PRK07908 hypothetical protein; Provisional
Probab=99.97 E-value=1.8e-28 Score=215.39 Aligned_cols=309 Identities=15% Similarity=0.129 Sum_probs=213.5
Q ss_pred cccccccCCCCC-ChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC-eEEcCCch-HHHHHHHHHhhhhcCC
Q 018240 3 TRTVDLRSDTVT-KPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA-GLFVPSGT-MGNLISVLVHCETRGS 79 (359)
Q Consensus 3 ~~~id~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~gt-~a~~~~l~~~~~~~g~ 79 (359)
...+||..+.+. .|++.+++++.+.......|...++..++++.++++++.+. .+++++|+ +++..++. + ++ +
T Consensus 22 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~--l-~~-~ 97 (349)
T PRK07908 22 PGLLDFAVNVRHDTPPEWLRERLAARLGDLAAYPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR--L-RP-R 97 (349)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhHhhcCCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh--c-CC-C
Confidence 457899887664 45688898888765444457666788999999999998764 36555555 55544444 4 35 4
Q ss_pred eEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhH
Q 018240 80 EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYT 159 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l 159 (359)
.+++..|+|..... .++..|.+++.++.+.++.+|++.+ + ++++++++. .++||||.+++.+
T Consensus 98 ~viv~~P~y~~~~~---~~~~~G~~i~~v~~~~~~~~d~~~l----~--------~~~~~i~l~-np~NPTG~~~~~~-- 159 (349)
T PRK07908 98 RAAVVHPSFTEPEA---ALRAAGIPVHRVVLDPPFRLDPAAV----P--------DDADLVVIG-NPTNPTSVLHPAE-- 159 (349)
T ss_pred eEEEeCCCChHHHH---HHHHcCCEEEeeccCcccCcChhHh----c--------cCCCEEEEc-CCCCCCCCCcCHH--
Confidence 67778899665443 3677899999998776677888743 4 567788884 4567999999965
Q ss_pred HHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEE-eccccCCCcee--eEEecCHHHHHHHHHHHHhhCC
Q 018240 160 DSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASV-CLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGG 236 (359)
Q Consensus 160 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~-s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~ 236 (359)
+|.++|+ ++.++|+||+|.... .....+.... ...+++++ |+||.+|.++. ||+++++++++.+......+.
T Consensus 160 -~l~~l~~-~~~~iIvDe~y~~~~-~~~~~~l~~~-~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~~- 234 (349)
T PRK07908 160 -QLLALRR-PGRILVVDEAFADAV-PGEPESLAGD-DLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAHWP- 234 (349)
T ss_pred -HHHHHHh-cCCEEEEECcchhhc-cCCccccccc-cCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCCCC-
Confidence 5566665 478899999975321 1111122222 12346665 99999985433 899999999988765543322
Q ss_pred CcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHH
Q 018240 237 GMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLE 312 (359)
Q Consensus 237 ~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (359)
. +....+++...++ .+.++.++++.++++++.+.|+++ ++++. ++..++++|+.++. .+++.+.|+
T Consensus 235 -~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~-~p~~g~~~~~~~~~-----~~~~~~~l~ 304 (349)
T PRK07908 235 -V--GTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GARVV-DPAAAPFVLVRVPD-----AELLRKRLR 304 (349)
T ss_pred -c--cHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEec-cCCCceEEEEECCc-----HHHHHHHHH
Confidence 2 2222233322222 334446677888899999999998 88764 34689999999874 457888889
Q ss_pred hcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 313 EHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 313 ~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
++||.+.++. .+++||++ .+++++++++++|++++.
T Consensus 305 ~~gI~v~~g~~f~~~~~~~vRis~---~~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 305 ERGIAVRRGDTFPGLDPDYLRLAV---RPRAEVPVLVQALAEILK 346 (349)
T ss_pred hCCEEEEECCCCCCCCCCeEEEEe---CCCccHHHHHHHHHHHHh
Confidence 9999997652 56899999 478899999999988754
No 156
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.97 E-value=1.8e-28 Score=216.27 Aligned_cols=291 Identities=22% Similarity=0.280 Sum_probs=216.1
Q ss_pred cCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC-
Q 018240 34 LMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ- 112 (359)
Q Consensus 34 ~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~- 112 (359)
|+.++...++++.+++++|.+.+++++||++|+..++..+..++|++|+++.++|.+... .+...|++++.++.+.
T Consensus 14 ~~~~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~ 90 (352)
T cd00616 14 LTLGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATAN---AILLLGATPVFVDIDPD 90 (352)
T ss_pred ccCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH---HHHHcCCeEEEEecCCC
Confidence 456788999999999999998889999999999999998854699999999999988764 2667788999998776
Q ss_pred CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH
Q 018240 113 DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR 192 (359)
Q Consensus 113 ~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~ 192 (359)
++.+|++++++.++ +++++|++++ ++|...+ +++|.++|+++|+++|+|++|++|... .+..
T Consensus 91 ~~~~d~~~l~~~i~--------~~~~~v~~~~----~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~g~~~-~~~~-- 152 (352)
T cd00616 91 TYNIDPELIEAAIT--------PRTKAIIPVH----LYGNPAD---MDAIMAIAKRHGLPVIEDAAQALGATY-KGRK-- 152 (352)
T ss_pred cCCcCHHHHHHhcC--------cCCeEEEEEC----CCCCcCC---HHHHHHHHHHcCCeEEEECCCCCCCeE-CCEE--
Confidence 68889999999987 6888988754 5788766 799999999999999999999876653 2221
Q ss_pred hhhcCccEEEEecc--ccCCCceeeEEec-CHHHHHHHHHHHHhhC-------------CCcchhHHHHHHHHHHHHHhH
Q 018240 193 RLVQAADSASVCLS--KGLGAPVGSVIVG-SKEFIKKARRLRKTLG-------------GGMRQVGVLCAAALVALQENV 256 (359)
Q Consensus 193 ~~~~~~d~~~~s~~--K~~g~~~gg~~~~-~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~l~~~~ 256 (359)
+....|+.++|++ |+++++.||+++. ++++.+.++.+..... .+..++++.++.+...++..
T Consensus 153 -~~~~~d~~~~S~~~~K~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~- 230 (352)
T cd00616 153 -VGTFGDAGAFSFHPTKNLTTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKL- 230 (352)
T ss_pred -cccCcceeEEcCCCCCCCcccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhh-
Confidence 1123466666655 9997666776665 5688777765543211 12223445555555555544
Q ss_pred HHHhhhHHHHHHHHHHHHhcCCCceEecCCc----cceEEEEEeccchHHHHHHHHHHHHhcCceec----cC-------
Q 018240 257 LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV----ETNIVYFEITEDSKLYAACLLKKLEEHGVLVM----PE------- 321 (359)
Q Consensus 257 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----~~------- 321 (359)
++..++..++.+++++.|+++|++++..++. ...++.+.++...+.+..++.+.|.++||.+. |.
T Consensus 231 ~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~ 310 (352)
T cd00616 231 DEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHYPPLHHQPPYK 310 (352)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeecCccccCHhhh
Confidence 3367778899999999999988988754322 22345566653112478899999999999662 11
Q ss_pred ----------------CCcEEEEEeCCCCCHHHHHHHHHHHH
Q 018240 322 ----------------SSTRVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 322 ----------------~~~~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
....+|+++++.++++|+++++++|+
T Consensus 311 ~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 311 KLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred hccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 02579999999999999999999874
No 157
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.97 E-value=1.3e-28 Score=220.04 Aligned_cols=327 Identities=14% Similarity=0.204 Sum_probs=219.1
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCC----CC--cc--C--CChHHHHHHHHHHHHhCCCC--eEEcCCchHHHHHHHHH
Q 018240 5 TVDLRSDTVTKPTEAMRAAMASAEVD----DD--VL--M--HDPTAFRLETEMAKVMGKEA--GLFVPSGTMGNLISVLV 72 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~----~~--~~--~--~~~~~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l~~ 72 (359)
.++|++...+++++.+++++.+.... .. .+ + ..+...++++.+++++|.+. .++++|||+++..++..
T Consensus 4 ~~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~ 83 (402)
T TIGR02006 4 PIYLDYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIKG 83 (402)
T ss_pred cEEeeCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHH
Confidence 47788877777778888888653311 11 01 0 12346778999999999864 46777888898888776
Q ss_pred hh---hhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC
Q 018240 73 HC---ETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC 149 (359)
Q Consensus 73 ~~---~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p 149 (359)
+. .++|++|+++.++|.+.......++..|++++.++.+.++.+|++.+++.++ +++++|++++++ ||
T Consensus 84 l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~--------~~~~lv~v~~~~-n~ 154 (402)
T TIGR02006 84 IAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIR--------DDTILVSIMHVN-NE 154 (402)
T ss_pred HHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC--------CCCEEEEEECCC-cC
Confidence 64 2478999999999988664211234468899999888888899999999998 678899886654 59
Q ss_pred CceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHH
Q 018240 150 GGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKAR 228 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~ 228 (359)
||...| +++|.++|+++|+++++|++|++|... ..... .++|++++|.||++| |.| |+++.+++....+.
T Consensus 155 tG~~~~---~~~I~~l~~~~g~~livD~a~a~g~~~---~~~~~--~~~D~~~~s~~K~~g-p~G~G~l~~~~~~~~~~~ 225 (402)
T TIGR02006 155 IGVIQD---IAAIGEICRERKVFFHVDAAQSVGKIP---INVNE--LKVDLMSISGHKIYG-PKGIGALYVRRKPRVRLE 225 (402)
T ss_pred ceeccc---HHHHHHHHHHcCCEEEEEcchhcCCcc---cCccc--cCCCEEEEehhhhcC-CCceEEEEEccCCCCCCC
Confidence 999987 789999999999999999998776543 22222 378999999999876 655 77766544333222
Q ss_pred HHHH-------hhCCCcchhHHHHH-HHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCC-ccce-EEEEEecc
Q 018240 229 RLRK-------TLGGGMRQVGVLCA-AALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDA-VETN-IVYFEITE 298 (359)
Q Consensus 229 ~~~~-------~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~~~~-~~~~~~~~ 298 (359)
.... ...++......... .++..++...+...++..++++++.+.|++++++.+..+. ...+ .+.+.+..
T Consensus 226 ~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~ 305 (402)
T TIGR02006 226 ALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNY 305 (402)
T ss_pred ceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeC
Confidence 1111 11111211111111 1222233444546667888899999999988888764321 1221 22344443
Q ss_pred chHHHHHHHHHHHHhcCceeccC-----------------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 299 DSKLYAACLLKKLEEHGVLVMPE-----------------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 299 ~~~~~~~~~~~~l~~~gi~~~~~-----------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
.+.+.+...| ++|.+..+ ..+.+|+|+++.+|++|+|++++.|++++++++
T Consensus 306 ---~~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 306 ---VEGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLR 379 (402)
T ss_pred ---cCHHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2344555555 35544211 136799999999999999999999999988764
No 158
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.97 E-value=6.4e-28 Score=215.64 Aligned_cols=324 Identities=18% Similarity=0.194 Sum_probs=224.8
Q ss_pred cccccccCC---CCCCh-HHHHHHHHHcCCCCC----CccCCChHHHHHHHHHHHHhCCC---CeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSD---TVTKP-TEAMRAAMASAEVDD----DVLMHDPTAFRLETEMAKVMGKE---AGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~---~~~~~-~~~~~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~~~~---~~~~~~~gt~a~~~~l~ 71 (359)
.++|||.++ ++.++ +|.+.+++.+..... ..|. .+...++.+.++++++.+ ..++++||++|+..++.
T Consensus 43 ~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~-~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~ 121 (398)
T PRK03244 43 KEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFA-TEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFK 121 (398)
T ss_pred CEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccC-CHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHH
Confidence 357899884 44455 588888887754421 1233 345578999999998854 45888999999999999
Q ss_pred HhhhhcC-CeEEecCCCcceeeccccccccCC------------ccceeeecCCCCCCCHHHHHHHhcCCCCCccCCcee
Q 018240 72 VHCETRG-SEVILGDNSHIHIYENGGISTIGG------------VHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTR 138 (359)
Q Consensus 72 ~~~~~~g-~~vl~~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 138 (359)
.++. +| ++|+..+++|..... ......| .++..++.+ |++.+++.++ ++++
T Consensus 122 ~~~~-~g~~~ii~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~--------~~~~ 185 (398)
T PRK03244 122 LARL-TGRTKIVAAEGGFHGRTM--GALALTGQPAKRAPFEPLPGGVEHVPYG-----DVDALAAAVD--------DDTA 185 (398)
T ss_pred HHHH-HCCCeEEEECCCcCCccH--HHHhccCCcccccCCCCCCCCceEeCCC-----CHHHHHHhhc--------CCeE
Confidence 8875 55 456666555543321 0111112 123333332 8899998886 6789
Q ss_pred EEEEeccccCCCceecCh-hhHHHHHHHHHHcCcEEEEecccccchhhhcCchh--HhhhcCccEEEEeccccCCCcee-
Q 018240 139 LICLENTHANCGGRCLSV-EYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV--RRLVQAADSASVCLSKGLGAPVG- 214 (359)
Q Consensus 139 ~v~i~~~~~~ptG~~~~~-~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~~d~~~~s~~K~~g~~~g- 214 (359)
+|+++++ +||+|..++. +++++|.++|++||+++|+||+|.. ++..+... ......+|++ +++|+++++..
T Consensus 186 aviiep~-~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g--~gr~g~~~~~~~~~~~pDi~--t~sK~l~~G~~i 260 (398)
T PRK03244 186 AVFLEPI-QGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTG--IGRTGAWFAHQHDGVTPDVV--TLAKGLGGGLPI 260 (398)
T ss_pred EEEEecc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--CcccchHHhhhhhCCCCCEE--EEchhhhCCccc
Confidence 9999877 5599998866 5699999999999999999999752 22223211 1111245654 66799974333
Q ss_pred eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhcCCCceEe-cCCccceEE
Q 018240 215 SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQLKGLRVD-VDAVETNIV 292 (359)
Q Consensus 215 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~ 292 (359)
|+++.++++.+.+... ..+.++..+++.++++...++... ++..++..++.+++++.|+++ +.... .....+.++
T Consensus 261 g~~~~~~~~~~~~~~~--~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~~ 337 (398)
T PRK03244 261 GACLAFGPAADLLTPG--LHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLL 337 (398)
T ss_pred EEEEEcHHHHhhccCC--CCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhc-CCCceeeEeeccEEE
Confidence 6677777887765422 233445556777777777776433 235667778888999999886 33211 113478888
Q ss_pred EEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 293 YFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
++.++.+ .+..+.+.|.++||.+.+.+...+|++++..++++|+++++++|+++++++.
T Consensus 338 ~i~~~~~---~~~~~~~~l~~~Gv~~~~~~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 338 GIVLTAP---VAKAVEAAAREAGFLVNAVAPDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred EEEEecc---HHHHHHHHHHHCCeEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 9988652 5678999999999999887778999999988999999999999999998653
No 159
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.97 E-value=1.1e-27 Score=210.52 Aligned_cols=318 Identities=20% Similarity=0.216 Sum_probs=226.3
Q ss_pred HHHHHHHHHcCCCC--------CCccCCChHHHHHH----HHHHHHhCCCCe-EEcCCchHHHHHHHHHhhhhc------
Q 018240 17 TEAMRAAMASAEVD--------DDVLMHDPTAFRLE----TEMAKVMGKEAG-LFVPSGTMGNLISVLVHCETR------ 77 (359)
Q Consensus 17 ~~~~~~a~~~~~~~--------~~~~~~~~~~~~l~----~~la~~~~~~~~-~~~~~gt~a~~~~l~~~~~~~------ 77 (359)
+|.+++++.....+ ..+|+..+..+++| ++.+++||.+++ +-..||+.|+..++.+++. |
T Consensus 62 s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~-~~~~~p~ 140 (493)
T PRK13580 62 SLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHAYVQPHSGADANLVAFWAILA-HKVESPA 140 (493)
T ss_pred CHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcccccCCCcHHHHHHHHHHHhc-ccccCcc
Confidence 47777777654332 23466556555554 456778999876 7889999999999999984 4
Q ss_pred -------------------------CCeEEecCCCcceeeccccccccCC--ccceeeecC-CCCCCCHHHHHHHhcCCC
Q 018240 78 -------------------------GSEVILGDNSHIHIYENGGISTIGG--VHPRTVKNN-QDGTMDIDLIEAAIRDPK 129 (359)
Q Consensus 78 -------------------------g~~vl~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~-~~~~~~~~~l~~~l~~~~ 129 (359)
||+|+..+..++.....+......+ .+.+.++.+ +++.+|++++++.++
T Consensus 141 ~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~--- 217 (493)
T PRK13580 141 LEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAR--- 217 (493)
T ss_pred hhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHh---
Confidence 7899977776665543221122223 334444444 458899999999999
Q ss_pred CCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEeccc
Q 018240 130 GEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSK 207 (359)
Q Consensus 130 ~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K 207 (359)
+.++.|++.+..++ +...| +++|+++|+++|+++++|++|+.|..+..... ..+. .++|++++|+||
T Consensus 218 -----~~~plvii~g~S~~--~~~~d---l~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~-~~~D~vtgT~hK 286 (493)
T PRK13580 218 -----EFKPLILVAGYSAY--PRRVN---FAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPV-PHADIVTTTTHK 286 (493)
T ss_pred -----hcCCEEEEeCcccc--CCCcC---HHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCC-CCCcEEEeCChh
Confidence 56677777677764 34555 89999999999999999999999887622211 1122 478999999999
Q ss_pred cCCCceeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH----HHHhhhHHHHHHHHHHHHhcCCCceEe
Q 018240 208 GLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENV----LVMLDGDHKKAKLLAEGLNQLKGLRVD 283 (359)
Q Consensus 208 ~~g~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~l~~~l~~~~g~~~~ 283 (359)
+|++|.||++++++++.+.++..... -.+...++..++++. ++.... .+++++..+++++|++.|++. |+.+.
T Consensus 287 aL~GP~GG~I~~~~~l~~~L~~a~P~-i~gg~l~p~iAA~av-Al~e~~~~ef~~y~~~l~~Na~~La~~L~~~-G~~vv 363 (493)
T PRK13580 287 TLRGPRGGLVLAKKEYADAVDKGCPL-VLGGPLPHVMAAKAV-ALAEARTPEFQKYAQQVVDNARALAEGFLKR-GARLV 363 (493)
T ss_pred hccCCCeEEEEecHHHHHHHhhCCCc-ccCCCccHHHHHHHH-HHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-CCCcc
Confidence 99778899999999988887533322 222233444444443 343322 336788899999999999999 99875
Q ss_pred cCCccceEEEEEeccchHHHHHHHHHHHHhcCceec-------cCC---CcEEEEEeCC----CCCHHHHHHHHHHHHHH
Q 018240 284 VDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVM-------PES---STRVRIVVHH----QISANDVHYTLSCFQKI 349 (359)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~-------~~~---~~~lRi~~~~----~~~~~~i~~~~~~l~~~ 349 (359)
.....+.++++.+.+ .+.....+.+.|.+.||.+. |.+ ...|||+++. .++++|++++++.|.++
T Consensus 364 ~ggTdshIV~V~lg~-~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~ 442 (493)
T PRK13580 364 TGGTDNHLVLIDVTS-FGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKV 442 (493)
T ss_pred CCCCCCCEEEEEeCC-HHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHH
Confidence 444578889999876 34455678889999999882 333 5679999876 56799999999999998
Q ss_pred HHHH
Q 018240 350 YAGV 353 (359)
Q Consensus 350 ~~~~ 353 (359)
++..
T Consensus 443 l~~~ 446 (493)
T PRK13580 443 LSNT 446 (493)
T ss_pred HHhh
Confidence 8754
No 160
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.97 E-value=8.8e-29 Score=203.99 Aligned_cols=323 Identities=19% Similarity=0.266 Sum_probs=263.2
Q ss_pred CCCCCChH--HHHHHHHHcCCCCC--------CccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh-hcC
Q 018240 10 SDTVTKPT--EAMRAAMASAEVDD--------DVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE-TRG 78 (359)
Q Consensus 10 ~~~~~~~~--~~~~~a~~~~~~~~--------~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~-~~g 78 (359)
|+.+.++. |++++||.+....+ +.-+.+....+||++++++.+.+.+++++|.--|+...|..+.. -||
T Consensus 178 SNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLftLak~lpg 257 (570)
T KOG1360|consen 178 SNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFTLAKKLPG 257 (570)
T ss_pred cCccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcceeeeeeeeeccchHHHHHHHHCCC
Confidence 44555444 99999998755321 23455778899999999999999999999999999988887753 378
Q ss_pred CeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhh
Q 018240 79 SEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEY 158 (359)
Q Consensus 79 ~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~ 158 (359)
..|.-++..|.++.. | .+..++.-..+.++ |++.|+++|++.+. ..+++|-+++.++ .+|.+.|
T Consensus 258 cei~SD~gNHASMI~-G--Irns~v~K~IFrHN-----D~~hL~~lL~~~~~----svPKivAFEtVhS-M~Gavcp--- 321 (570)
T KOG1360|consen 258 CEIFSDEGNHASMIQ-G--IRNSRVPKHIFRHN-----DLDHLEQLLQSSPK----SVPKIVAFETVHS-MDGAVCP--- 321 (570)
T ss_pred cEEeccccchHHHHH-H--hhhcCCcceeeccC-----CHHHHHHHHHhCCC----CCCceEEEeeeec-cCCCcCC---
Confidence 888899999999887 5 67777666666777 99999999986432 4688999999998 7899988
Q ss_pred HHHHHHHHHHcCcEEEEecccccchhhhcCchhHh---hhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHHhhC
Q 018240 159 TDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRR---LVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLG 235 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~---~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~~~~ 235 (359)
+++|++++++||++-.+||+|+.|.++..|....+ .....|+++.++.|.||. .||++.+...+++.++.+...+.
T Consensus 322 leelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc-VGGYIAat~~LvDmiRSyAaGFI 400 (570)
T KOG1360|consen 322 LEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC-VGGYIAATRKLVDMIRSYAAGFI 400 (570)
T ss_pred HHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccc-ccceehhhhhHHHHHHHhcCceE
Confidence 89999999999999999999998887755443332 234678999999999995 99999999999999999999888
Q ss_pred CCcchhHHHHHHHHHHHHHhH----HHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHH
Q 018240 236 GGMRQVGVLCAAALVALQENV----LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKL 311 (359)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (359)
.+++.++-..+.++.+.+... ...++..+++..++++.|.++ |+.+. +.++.++.+.+.+. ....++.+.|
T Consensus 401 FTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~-GiPVi--~~pSHIiPv~vgda--~l~~~~sd~L 475 (570)
T KOG1360|consen 401 FTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL-GIPVI--PNPSHIIPVRVGDA--ALAKQASDIL 475 (570)
T ss_pred EecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc-CCccc--CCCcceeeeeccCH--HHHHHHHHHH
Confidence 888888888888877764221 124555778899999999999 99986 44788888888763 4667778877
Q ss_pred -HhcCcee-------ccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 312 -EEHGVLV-------MPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 312 -~~~gi~~-------~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
.++||++ ++.|...+||.+++.++++.++.+++.+..+.+++.
T Consensus 476 i~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~ 526 (570)
T KOG1360|consen 476 ISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVG 526 (570)
T ss_pred HHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 8999998 567888999999999999999999999999998875
No 161
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.97 E-value=7.3e-28 Score=215.48 Aligned_cols=324 Identities=19% Similarity=0.184 Sum_probs=221.6
Q ss_pred cccccccCCCCC----ChHHHHHHHHHcCCCCCCc---cCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018240 3 TRTVDLRSDTVT----KPTEAMRAAMASAEVDDDV---LMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~~~~----~~~~~~~~a~~~~~~~~~~---~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.+++||.++... ..+|.+.+++.+....... ....+...++++.++++++.+.+++++||++|+..++..++.
T Consensus 41 ~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~al~~a~~ 120 (401)
T PRK00854 41 NRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRK 120 (401)
T ss_pred CEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHH
Confidence 357898886332 3358888888775443211 123567789999999999988899999999999999999863
Q ss_pred h--------cC-CeEEecCC-CcceeeccccccccC------------CccceeeecCCCCCCCHHHHHHHhcCCCCCcc
Q 018240 76 T--------RG-SEVILGDN-SHIHIYENGGISTIG------------GVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIV 133 (359)
Q Consensus 76 ~--------~g-~~vl~~~~-~~~~~~~~~~~~~~~------------g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~ 133 (359)
. ++ ++|++... .|.+... . .... ...+..++.+ |++++++.+.
T Consensus 121 ~~~~~~g~~~~~~~vi~~~~~~HG~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~i~------- 185 (401)
T PRK00854 121 WGYEVKGVPEGQAEIIVCADNFHGRTLS--I-VGFSTDPDARGGFGPFTPGFRVVPFG-----DAEALEAAIT------- 185 (401)
T ss_pred HHHhccCCCCCCceEEEECCCcCCccHH--H-HhccCCccccccCCCCCCCeEEeCCC-----CHHHHHHHhC-------
Confidence 1 12 45665554 4544322 1 1111 1122333333 8999999998
Q ss_pred CCceeEEEEeccccCCCceecCh-hhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH--hhhcCccEEEEeccccCC
Q 018240 134 YPTTRLICLENTHANCGGRCLSV-EYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR--RLVQAADSASVCLSKGLG 210 (359)
Q Consensus 134 ~~~~~~v~i~~~~~~ptG~~~~~-~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~~d~~~~s~~K~~g 210 (359)
+++++|+++++.+ |+|.+++. +++++|+++|++||+++|+||+|. | ++..+.... .....+|++++ +|+++
T Consensus 186 -~~~~aii~e~~~~-~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g-~g~~g~~~~~~~~g~~~D~~~~--~K~l~ 259 (401)
T PRK00854 186 -PNTVAFLVEPIQG-EAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-G-LGRTGKLLAEEHEGIEADVTLI--GKALS 259 (401)
T ss_pred -CCeEEEEEccccC-CCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCCCchHhHHhhcCCCCCEEEe--ccccc
Confidence 6899999977665 99998874 679999999999999999999986 2 222232111 11124677665 48886
Q ss_pred Cce--eeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcCCCce-EecCC
Q 018240 211 APV--GSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQLKGLR-VDVDA 286 (359)
Q Consensus 211 ~~~--gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~~g~~-~~~~~ 286 (359)
+.. .|++++++++++.++.. ..+.++..++..++++..+++...+ ...++..++.+++.+.|+++ +.. +....
T Consensus 260 gg~~~ig~v~~~~~~~~~l~~~--~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~ 336 (401)
T PRK00854 260 GGFYPVSAVLSNSEVLGVLKPG--QHGSTFGGNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSI-RSNIVREVR 336 (401)
T ss_pred CCccCeEEEEEcHHHHhcccCC--CCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhh-ccCceEEEe
Confidence 543 37788898888876432 2233344466777777777765432 25667778889999999887 332 21112
Q ss_pred ccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 287 VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
..+.++.+.+..+ ..+..++.+.|.++||.+.+.+..++|++++..++++++++++++|++++.
T Consensus 337 g~g~~~~i~~~~~-~~~~~~~~~~L~~~GV~v~~~~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 337 GRGLMLAVELEPE-AGGARQYCEALKERGLLAKDTHDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred ccceEEEEEEecC-chhHHHHHHHHHHCCeEEecCCCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 3455555555331 235778999998899999877678999999888999999999999998763
No 162
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.97 E-value=9.9e-28 Score=211.85 Aligned_cols=294 Identities=20% Similarity=0.235 Sum_probs=217.3
Q ss_pred CCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC-C
Q 018240 35 MHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ-D 113 (359)
Q Consensus 35 ~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~ 113 (359)
..++...++|+.+++++|.+++++++||++|+..++.++..++||+|+++.++|.+... .+...|++++.++.+. +
T Consensus 30 ~~g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~---~~~~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 30 TTGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLN---MIVLLGATPVMVDVDRDT 106 (379)
T ss_pred cCCHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHH---HHHHcCCEEEEEecCCCc
Confidence 34678999999999999999999999999999999998833699999999999887654 3667899999998764 4
Q ss_pred CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHh
Q 018240 114 GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRR 193 (359)
Q Consensus 114 ~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~ 193 (359)
+.+|++++++.++ +++++|+..| ++|...+ +++|.++|+++|+++|+|++|++|... .+.....
T Consensus 107 ~~~d~~~l~~~i~--------~~tkav~~~~----~~G~~~d---~~~i~~~a~~~gi~vi~D~a~a~g~~~-~~~~~g~ 170 (379)
T PRK11658 107 LMVTPEAIEAAIT--------PRTKAIIPVH----YAGAPAD---LDAIRAIGERYGIPVIEDAAHAVGTYY-KGRHIGA 170 (379)
T ss_pred CCcCHHHHHHhcc--------cCCeEEEEeC----CCCCcCC---HHHHHHHHHHcCCeEEEECCCccCCeE-CCeecCC
Confidence 5689999999998 6788887433 5788765 899999999999999999999877553 3333333
Q ss_pred hhcCccEEEEeccccCCCceeeEEec-CHHHHHHHHHHHHh----------------------hCCCcchhHHHHHHHHH
Q 018240 194 LVQAADSASVCLSKGLGAPVGSVIVG-SKEFIKKARRLRKT----------------------LGGGMRQVGVLCAAALV 250 (359)
Q Consensus 194 ~~~~~d~~~~s~~K~~g~~~gg~~~~-~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~ 250 (359)
+ +.++++++.+|.+.++.||+++. ++++.++++.++.. .|.+..++.+.++.++.
T Consensus 171 ~--g~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ 248 (379)
T PRK11658 171 R--GTAIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALV 248 (379)
T ss_pred C--CCEEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHH
Confidence 3 44677778889887666776665 68888887754421 12234455666777777
Q ss_pred HHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCc---cceE-EEEEeccc-hHHHHHHHHHHHHhcCceeccC----
Q 018240 251 ALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV---ETNI-VYFEITED-SKLYAACLLKKLEEHGVLVMPE---- 321 (359)
Q Consensus 251 ~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~---~~~~-~~~~~~~~-~~~~~~~~~~~l~~~gi~~~~~---- 321 (359)
.++...+ ..++.+++++++.+.|++++...+..+.. ..+. ..+.++.. .+.+.+++.+.|.++||.+...
T Consensus 249 ql~~l~~-~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~~~ 327 (379)
T PRK11658 249 QLAKLEA-LNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALMEALKERGIGTGLHFRAA 327 (379)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccCCHHHHHHHHHHCCCCCcccCcCc
Confidence 7766544 78888899999999999885333322211 1222 22444321 1346889999999999876310
Q ss_pred ---------------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 322 ---------------------SSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 322 ---------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
....+.+++++.+++++++++++.|++++
T Consensus 328 ~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 328 HTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred ccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 12347888899999999999999999865
No 163
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.97 E-value=5.2e-28 Score=215.46 Aligned_cols=328 Identities=17% Similarity=0.163 Sum_probs=221.6
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC---ccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD---VLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.+++||.++ +....+|++.+++.+...... .....+...++.+.+++..+.+.+++++||++|+..+++.+..
T Consensus 31 ~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~~~al~~ar~ 110 (389)
T PRK01278 31 ERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVENSFADKVFFTNSGAEAVECAIKTARR 110 (389)
T ss_pred CEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhhCCCCEEEEcCCcHHHHHHHHHHHHH
Confidence 357899884 445555898888887554311 1123677789999999988777789999999999999998742
Q ss_pred ---hcCC----eEEecCCCcceeeccccccccCCcccee--e-ecCCCC----CCCHHHHHHHhcCCCCCccCCceeEEE
Q 018240 76 ---TRGS----EVILGDNSHIHIYENGGISTIGGVHPRT--V-KNNQDG----TMDIDLIEAAIRDPKGEIVYPTTRLIC 141 (359)
Q Consensus 76 ---~~g~----~vl~~~~~~~~~~~~~~~~~~~g~~~~~--v-~~~~~~----~~~~~~l~~~l~~~~~~~~~~~~~~v~ 141 (359)
.+|+ +|++.+++|..... ......+..... + +...+. ..|++.+++.++ +++++|+
T Consensus 111 ~~~~~G~~~r~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~--------~~~~avi 180 (389)
T PRK01278 111 YHYGKGHPERYRIITFEGAFHGRTL--ATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAIT--------PNTAAIL 180 (389)
T ss_pred HHHhcCCCCCCEEEEECCCcCCCcH--HHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhC--------CCeEEEE
Confidence 2454 78888877655443 112222221110 0 111111 148999999998 6899999
Q ss_pred EeccccCCCc-eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh--HhhhcCccEEEEeccccCCCce-eeEE
Q 018240 142 LENTHANCGG-RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV--RRLVQAADSASVCLSKGLGAPV-GSVI 217 (359)
Q Consensus 142 i~~~~~~ptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~~d~~~~s~~K~~g~~~-gg~~ 217 (359)
++++ ++++| .+++.+++++|+++|++||+++|+||+|.. +...+... ......+|+ .+++|.++.+. .|++
T Consensus 181 vep~-~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g--~g~~g~~~~~~~~~~~pdi--~t~sK~l~~G~~ig~~ 255 (389)
T PRK01278 181 IEPI-QGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCG--MGRTGKLFAHEWAGVTPDI--MAVAKGIGGGFPLGAC 255 (389)
T ss_pred Eecc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcCCcceeecccCCCCCE--EEEehhccCCcceEEE
Confidence 9766 55888 688999999999999999999999999752 22223211 111123454 47789997432 2667
Q ss_pred ecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhc----CCCceEecCCccceEE
Q 018240 218 VGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQ----LKGLRVDVDAVETNIV 292 (359)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~----~~g~~~~~~~~~~~~~ 292 (359)
++++++.+.+... ..+.++..+++.++++..+++...+ ...++..++.+++++.|++ .+++.... ...+.++
T Consensus 256 ~~~~~~~~~~~~~--~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v-~g~G~~~ 332 (389)
T PRK01278 256 LATEEAAKGMTPG--THGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEV-RGKGLLL 332 (389)
T ss_pred EEcHHHHhccCCC--CCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-ecccEEE
Confidence 8888887766432 2334444567777777777754322 2345555666666666654 33221111 2356677
Q ss_pred EEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 293 YFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
++.+.. +..++.++|.++||.+.|++...+|++++..++++++++++++|++++++
T Consensus 333 ~i~~~~----~~~~~~~~l~~~GV~~~p~~~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 333 GLKCVV----PNRDLVQALRDEGLLTVGAGDNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred EEEEec----CHHHHHHHHHHCCeEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 777654 56789999988899999988889999988789999999999999998865
No 164
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.97 E-value=7.5e-28 Score=210.57 Aligned_cols=307 Identities=15% Similarity=0.132 Sum_probs=221.9
Q ss_pred HHHHHHHHcCCCCCCccCC--ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc
Q 018240 18 EAMRAAMASAEVDDDVLMH--DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG 95 (359)
Q Consensus 18 ~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~ 95 (359)
+++.++..........|+. .|....||+.++++.+.+.+++++||++|+..++.+++ ++||+|+++++.|.+.....
T Consensus 39 ~~~~~~~~~~~~~~~~Y~r~~npt~~~Le~~iA~le~~~~~~~~~sG~~Ai~~~l~all-~~GD~Vvv~~~~Y~~t~~l~ 117 (394)
T PRK09028 39 AEMRHAAKNRANGEMFYGRRGTPTHFAFQAAIVELEGGAGTALYPSGAAAISNALLSFL-KAGDHLLMVDSCYEPTRDLC 117 (394)
T ss_pred HHHHHHhccCccCCceecCCCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEECCCcHHHHHHH
Confidence 4555555432212234554 57788999999999998888999999999999999887 59999999999986665300
Q ss_pred -cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEE
Q 018240 96 -GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLH 174 (359)
Q Consensus 96 -~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li 174 (359)
......|+++..++.. +.+.+++.++ +++++|+++++. ||||...+ +++|+++|+++|++++
T Consensus 118 ~~~l~~~Gi~v~~v~~~-----~~e~l~~~l~--------~~TklV~lesps-NPtg~v~d---l~~I~~la~~~g~~lv 180 (394)
T PRK09028 118 DKILKGFGIETTYYDPM-----IGEGIRELIR--------PNTKVLFLESPG-SITMEVQD---VPTLSRIAHEHDIVVM 180 (394)
T ss_pred HHhhhhcceEEEEECCC-----CHHHHHHhcC--------cCceEEEEECCC-CCCCcHHH---HHHHHHHHHHcCCEEE
Confidence 1234567777766533 5678888887 789999997655 49988654 8999999999999999
Q ss_pred EecccccchhhhcCchhHhhhcCccEEEEeccccCCCc---eeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHH
Q 018240 175 IDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAP---VGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVA 251 (359)
Q Consensus 175 ~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (359)
+|++|+.+. ...++..++|+++.|.+||++++ .+|+++.++++.+.++......|.+. ++..++....+
T Consensus 181 vD~t~a~p~------~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~--~p~~a~l~~rg 252 (394)
T PRK09028 181 LDNTWASPI------NSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCT--SPDDVYLAMRG 252 (394)
T ss_pred EECCccccc------cCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCC--CHHHHHHHHcc
Confidence 999964421 12333448999999999999876 34777888888777776666667665 66777777778
Q ss_pred HHHhHHHHhhhHHHHHHHHHHHHhcCCCce-EecCC---------------ccceEEEEEeccchHHHHHHHHHHHHhcC
Q 018240 252 LQENVLVMLDGDHKKAKLLAEGLNQLKGLR-VDVDA---------------VETNIVYFEITEDSKLYAACLLKKLEEHG 315 (359)
Q Consensus 252 l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 315 (359)
++...- ++++..+++..+.+.|++.|.++ +..|. ..+.++.|.++........+|.+.|+--.
T Consensus 253 l~TL~l-R~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f~~~l~l~~ 331 (394)
T PRK09028 253 LRTLGV-RLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGMQHFK 331 (394)
T ss_pred cCcHHH-HHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcce
Confidence 877554 88999999999999999987664 33331 34667888886312234567777764322
Q ss_pred cee----------ccC-------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 316 VLV----------MPE-------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 316 i~~----------~~~-------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
+.+ .|. .++.+|+++. + |+.+++++.|.+++++++.
T Consensus 332 ~~~slG~~~sLv~~p~~~~~~~~~~~~~~~~~liR~svG--l--Ed~~dLi~Dl~~Al~~~~~ 390 (394)
T PRK09028 332 MGFSWGGFESLILGVFGINKLRTATNWDFSKPLIRLHIG--L--EDVDDLIADLEAGFERYNA 390 (394)
T ss_pred EecccCCCcceeECCCCcCccCchhhhcCCCCeEEEEeC--c--CCHHHHHHHHHHHHHHHHH
Confidence 221 111 1246999985 3 5788888888888887754
No 165
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.97 E-value=5.4e-28 Score=210.15 Aligned_cols=300 Identities=15% Similarity=0.054 Sum_probs=202.6
Q ss_pred ccccccCC-CCCChH-HHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeE
Q 018240 4 RTVDLRSD-TVTKPT-EAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEV 81 (359)
Q Consensus 4 ~~id~~~~-~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~v 81 (359)
..|||+++ ++.+|+ +.+.+...+ .|.. + ...|++.++++++.+. +++++|++..+..+. .+ .+||+|
T Consensus 21 ~~i~l~~ne~p~~~~~~~~~~~~~~------~yp~-~-~~~Lr~~ia~~~~~~~-I~it~Gs~~al~~~~-~~-~~gd~v 89 (330)
T PRK05664 21 DWLDLSTGIAPWPWPVPAIPADAWA------RLPE-T-DDGLEAAARAYYGAPQ-LLPVAGSQAAIQALP-RL-RAPGRV 89 (330)
T ss_pred HheeecCCcCCCCCCCcccCHHHHH------hCCC-C-hHHHHHHHHHHhCCCC-EEECcCHHHHHHHHH-Hc-cCCCEE
Confidence 35889988 443444 232221111 1322 2 2799999999999865 555555544443333 23 599999
Q ss_pred EecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHH
Q 018240 82 ILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDS 161 (359)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~ 161 (359)
++++|+|.... ..++..|++++.++. +++++.++ +++++++.+| |||||.+++.+++++
T Consensus 90 ~v~~P~y~~~~---~~~~~~g~~~~~v~~--------~~~~~~~~---------~~~~v~l~nP-~NPTG~~~s~~~l~~ 148 (330)
T PRK05664 90 GVLSPCYAEHA---HAWRRAGHQVRELDE--------AEVEAALD---------SLDVLVVVNP-NNPTGRRFDPARLLA 148 (330)
T ss_pred EEcCCChHHHH---HHHHHcCCeEEEech--------hhHhhhhc---------CCCEEEEeCC-cCCCCCccCHHHHHH
Confidence 99999976644 347888999988854 34555444 3556777555 579999999999999
Q ss_pred HHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEE-eccccCCCcee--eEEecCHHHHHHHHHHHHhhCCCc
Q 018240 162 VGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASV-CLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGGGM 238 (359)
Q Consensus 162 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~-s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~~~ 238 (359)
|+++|+++|++||+||+|.... ...+...+.....++++ |+||.+|.|+. ||+++++++++.+......+. .
T Consensus 149 l~~~~~~~~~~iI~DE~y~~~~---~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~~~~~--~ 223 (330)
T PRK05664 149 WHARLAARGGWLVVDEAFMDNT---PQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGPWT--V 223 (330)
T ss_pred HHHHHHhcCCEEEEECCcccCC---CcccccccccCCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHHhcCCCC--C
Confidence 9999999999999999963221 11233333322235554 99999996544 999999999998876543222 2
Q ss_pred chhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCc
Q 018240 239 RQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGV 316 (359)
Q Consensus 239 ~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi 316 (359)
+.....++..++. ...+..++++.++++++.+.|++. +++. .+...+++|+.++ +..++.+.|.++||
T Consensus 224 --~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~--~~~~~~f~~~~~~-----~~~~~~~~l~~~gi 293 (330)
T PRK05664 224 --SGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH-GLTP--AGGCALFQWVRTE-----DAAALHEFLARRGI 293 (330)
T ss_pred --CHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC-CCcc--cCCcceEEEEecC-----CHHHHHHHHHHCCe
Confidence 3344444555553 233445667778899999999988 7643 1223467777653 45788899999999
Q ss_pred eeccC-CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 317 LVMPE-SSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 317 ~~~~~-~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.+... ...++||+++ .++++++++.+.|+++.++
T Consensus 294 ~v~~f~~~~~iRis~~--~~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 294 LTRLFEQPASLRFGLP--ADEADWARLDQALLAYRKE 328 (330)
T ss_pred EEEECCCCCeEEEECC--CCHHHHHHHHHHHHHHHhh
Confidence 99654 3568999995 3678899999888877654
No 166
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.97 E-value=7.5e-28 Score=212.53 Aligned_cols=286 Identities=17% Similarity=0.163 Sum_probs=210.7
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
+|...+||+.+++++|.+.+++++||+.|+..++.+++ ++||+|+++.+.|.+.+... ..+...|+++..++.+
T Consensus 58 ~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~~l~al~-~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~---- 132 (391)
T TIGR01328 58 NPTVSNLEGRIAFLEGTEAAVATSSGMGAIAATLLTIL-KAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMA---- 132 (391)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCC----
Confidence 57789999999999999999999999999999888887 59999999999876544200 1245578888888765
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
|++++++.++ +++++|+++++.| |+|.+.+ +++|.++|+++|+++|+|++++.+.. +. ++.
T Consensus 133 -d~e~l~~~i~--------~~tklV~le~p~N-p~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~---~~---~~~ 193 (391)
T TIGR01328 133 -IPEEVKAHIK--------DNTKIVYFETPAN-PTMKLID---MERVCRDAHSQGVKVIVDNTFATPML---TN---PVA 193 (391)
T ss_pred -CHHHHHHhhc--------cCCeEEEEECCCC-CCCcccC---HHHHHHHHHHcCCEEEEECCCchhcc---CC---chh
Confidence 8999999988 7899999977655 9999887 89999999999999999999754322 22 233
Q ss_pred cCccEEEEeccccCCCce---eeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHH
Q 018240 196 QAADSASVCLSKGLGAPV---GSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAE 272 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 272 (359)
.++|+++.|++|++|++. ||+++++++++++++........+...++..++.+..+++.... ++++..+++.++.+
T Consensus 194 ~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~tl~~-r~~~~~~na~~la~ 272 (391)
T TIGR01328 194 LGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKTLNI-RMKRHSENAMKVAE 272 (391)
T ss_pred cCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCcHHH-HHHHHHHHHHHHHH
Confidence 478999999999998653 68899999998888754332111233466667777777776555 78889999999999
Q ss_pred HHhcCCCce-EecCC---------------ccceEEEEEeccchHHHHHHHHHHHHhcCcee----------ccC-----
Q 018240 273 GLNQLKGLR-VDVDA---------------VETNIVYFEITEDSKLYAACLLKKLEEHGVLV----------MPE----- 321 (359)
Q Consensus 273 ~l~~~~g~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~----------~~~----- 321 (359)
.|++.|+++ +..|. ..+..+.|.++. ......+|.+.|+--.+.. .|.
T Consensus 273 ~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~-~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~ 351 (391)
T TIGR01328 273 YLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKG-GFAGAKKLLNNLKLIRLAVSLGDAETLIQHPASMTHA 351 (391)
T ss_pred HHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCC-CHHHHHHHHHhCCcceEecCCCCCcccCcCCCccccc
Confidence 999987764 32221 236678888864 2234567777764322211 011
Q ss_pred ------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 322 ------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 322 ------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
..+.+|+++. + |+.+.+++.|.++++.
T Consensus 352 ~~~~~~~~~~gi~~~liR~svG--l--E~~~dl~~dl~~al~~ 390 (391)
T TIGR01328 352 VVPKEEREAAGITDGMIRLSVG--L--EDADDLIADLKQALDA 390 (391)
T ss_pred cCCHHHHHhcCCCCCeEEEEeC--c--CCHHHHHHHHHHHHhh
Confidence 1346999985 3 5788888888888764
No 167
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.97 E-value=1.1e-27 Score=211.62 Aligned_cols=288 Identities=20% Similarity=0.166 Sum_probs=214.7
Q ss_pred CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCC
Q 018240 36 HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDG 114 (359)
Q Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 114 (359)
..|....+|+.++++.|.+.+++++||++|+..++.+++ ++||+|+++.+.|.+..... ..+...|+++..++.
T Consensus 62 ~~p~~~~le~~lA~l~g~~~~i~~ssG~~Ai~~~l~all-~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~---- 136 (398)
T PRK08249 62 TNPTVQAFEEKVRILEGAEAATAFSTGMAAISNTLYTFL-KPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCET---- 136 (398)
T ss_pred CChHHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCC----
Confidence 468889999999999999999999999999999988887 59999999999987653200 124456877776654
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh
Q 018240 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
.|++++++.++ +++++|+++++. ||||.+.+ +++|.++|+++|+++|+|++|+.+.. .. ++
T Consensus 137 -~d~e~l~~~i~--------~~tklV~ie~p~-NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~---~~---~l 197 (398)
T PRK08249 137 -GDHEQIEAEIA--------KGCDLLYLETPT-NPTLKIVD---IERLAAAAKKVGALVVVDNTFATPIN---QN---PL 197 (398)
T ss_pred -CCHHHHHHhcC--------CCCeEEEEECCC-CCCCccCC---HHHHHHHHHHcCCEEEEECCcCcccc---CC---ch
Confidence 38999999998 789999996655 59999988 78999999999999999999753221 11 22
Q ss_pred hcCccEEEEeccccCCCc---eeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHH
Q 018240 195 VQAADSASVCLSKGLGAP---VGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLA 271 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 271 (359)
..++|+++.|+||+++++ .||++++++++.+.++..+...+... ++..++.+..+++.... ++++..+++..+.
T Consensus 198 ~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~--s~~~a~l~l~~l~tL~~-R~~~~~~na~~la 274 (398)
T PRK08249 198 ALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREINGATM--DPMSAYLILRGMKTLKL-RVRQQQESAMALA 274 (398)
T ss_pred hhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCC--CHHHHHHHHhCcchHHH-HHHHHHHHHHHHH
Confidence 247899999999999864 46888899999998887777666544 66677777777776655 7788899999999
Q ss_pred HHHhcCCCce-EecCC---------------ccceEEEEEeccchHHHHHHHHHHHHhcCceec----------cC----
Q 018240 272 EGLNQLKGLR-VDVDA---------------VETNIVYFEITEDSKLYAACLLKKLEEHGVLVM----------PE---- 321 (359)
Q Consensus 272 ~~l~~~~g~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----------~~---- 321 (359)
+.|++.|.++ +..|. ..+..+.|.+.. ......+|.+.|+--.+.+. |.
T Consensus 275 ~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~-~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~ 353 (398)
T PRK08249 275 KYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKG-GMDTVKRLLPKLRYAHRAANLGAVETIYGPARTTSH 353 (398)
T ss_pred HHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcC-CHHHHHHHHHhCCcceEccCCCCCCceeeCCccccc
Confidence 9999987664 33321 246677788864 22345677777643222111 10
Q ss_pred -------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 322 -------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 322 -------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
.++.+|+++. + |+.+.+++.|.++++.+..
T Consensus 354 ~~~~~~~~~~~gi~~~liR~svG--l--E~~~dl~~dl~~al~~~~~ 396 (398)
T PRK08249 354 VENTLEERAALGIPEGLVRISVG--I--EDTEDLIADLEQAFAHLES 396 (398)
T ss_pred ccCCHHHHHhcCCCCCeEEEEec--c--CCHHHHHHHHHHHHHHhhh
Confidence 2356999985 3 5788888888888877543
No 168
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.3e-28 Score=216.34 Aligned_cols=304 Identities=13% Similarity=0.129 Sum_probs=207.9
Q ss_pred cccccCCCCCChH-HHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC-eEEcCCch-HHHHHHHHHhhhhcC-Ce
Q 018240 5 TVDLRSDTVTKPT-EAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA-GLFVPSGT-MGNLISVLVHCETRG-SE 80 (359)
Q Consensus 5 ~id~~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~gt-~a~~~~l~~~~~~~g-~~ 80 (359)
.|+|..+.+..+. +.+ .+. ....|... ...+|++++++++|.+. .+++++|+ +++..++.+++ ++| ++
T Consensus 33 ~~~l~~ne~~~~~~~~~--~~~----~~~~Yp~~-~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~-~~g~d~ 104 (354)
T PRK04635 33 DIWINANESPFNNEYKL--DLA----RLNRYPEC-QPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFC-EPGQDS 104 (354)
T ss_pred cEEeeCCCCCCCCChhh--hhH----HhccCCCC-CHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhc-CCCCCe
Confidence 4778777555443 332 111 22335443 47899999999999865 36666665 55555555555 578 89
Q ss_pred EEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHH
Q 018240 81 VILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTD 160 (359)
Q Consensus 81 vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~ 160 (359)
|+++.|+|.. +. ..++..|++++.++.++++.+|.+.++. + +++++|+++ .+|||||.+++.+++.
T Consensus 105 vlv~~P~y~~-y~--~~~~~~g~~v~~v~~~~~~~~~~~~l~~-~---------~~~~li~i~-nP~NPTG~~~~~~~l~ 170 (354)
T PRK04635 105 IACFGPTYGM-YA--ISAETFNVGVKALPLTADYQLPLDYIEQ-L---------DGAKLVFIC-NPNNPTGTVIDRADIE 170 (354)
T ss_pred EEEcCCChHH-HH--HHHHHcCCEEEEEecCCCCCCCHHHHHh-c---------cCCCEEEEe-CCCCCCCccCCHHHHH
Confidence 9999999654 44 3477889999999887778889988862 2 368899996 5566999999988888
Q ss_pred HHHHHHHHcCcEEEEecccccchhhhcCchhHhhhc-CccEEEE-eccccCCCcee--eEEecCHHHHHHHHHHHHhhCC
Q 018240 161 SVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQ-AADSASV-CLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGG 236 (359)
Q Consensus 161 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~d~~~~-s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~ 236 (359)
+|++.|+ +++||+||+|.-.. ...+...+.. ...++++ |+||++|.++. ||+++++++++.+......+
T Consensus 171 ~l~~~~~--~~~vivDeay~~~~---~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~~~~~-- 243 (354)
T PRK04635 171 QLIEMTP--DAIVVVDEAYIEFC---PEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELIEILMRVIAPY-- 243 (354)
T ss_pred HHHHhCC--CcEEEEeCchHhhc---cCcchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhhcCCC--
Confidence 8888765 49999999964322 1222222221 2334444 99999985443 88999999998876543322
Q ss_pred CcchhHHHHHHHHHHHHH----hHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHH
Q 018240 237 GMRQVGVLCAAALVALQE----NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLE 312 (359)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (359)
+. +...+.++...+.+ ..++.++.+.++++.+.+.|++++++++. + ..++++|+.++. ..++.+.|.
T Consensus 244 ~~--~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~-~~g~f~~~~~~~-----~~~~~~~l~ 314 (354)
T PRK04635 244 PV--PLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVL-E-GNGNYVLAKFDD-----VDAVFKALW 314 (354)
T ss_pred CC--CHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-C-CCCcEEEEECCC-----HHHHHHHHH
Confidence 22 23333444444432 22334556777889999999998557764 3 367888888753 457788889
Q ss_pred hcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 313 EHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 313 ~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
++||.+...+ .+++||++ .+++++++++++|++.
T Consensus 315 ~~gv~v~~~~~~~~~~~lRis~---~~~e~~~~l~~al~~~ 352 (354)
T PRK04635 315 DAGIVARAYKDPRLANCIRFSF---SNRAETDKLIGLIRNQ 352 (354)
T ss_pred HCCEEEEECCCCCCCCeEEEEe---CCHHHHHHHHHHHHHh
Confidence 9999985442 46899998 4789999999999754
No 169
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.97 E-value=4.6e-28 Score=214.65 Aligned_cols=314 Identities=22% Similarity=0.253 Sum_probs=228.1
Q ss_pred ccccCCCCCChHHHHHHHHHcCCC----CC--CccCC----ChHHHHHHHHHHHHhCCCC---eEEcCCchHHHHHHHHH
Q 018240 6 VDLRSDTVTKPTEAMRAAMASAEV----DD--DVLMH----DPTAFRLETEMAKVMGKEA---GLFVPSGTMGNLISVLV 72 (359)
Q Consensus 6 id~~~~~~~~~~~~~~~a~~~~~~----~~--~~~~~----~~~~~~l~~~la~~~~~~~---~~~~~~gt~a~~~~l~~ 72 (359)
|.|.+.....+++.+.+++.+... +. ..+.. .+...++++.+++++|.+. .++++|+|.++..++..
T Consensus 1 iYld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~ 80 (371)
T PF00266_consen 1 IYLDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASS 80 (371)
T ss_dssp EEEBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHH
T ss_pred CEeeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhc
Confidence 456666666666777777766421 11 11221 3345789999999999987 36788888888888888
Q ss_pred hh--hhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC
Q 018240 73 HC--ETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC 149 (359)
Q Consensus 73 ~~--~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p 149 (359)
+. .++|++|++.+..|++..... ...+..|+++..++.+.++.+|++++++.++ +++++|++.+..+ .
T Consensus 81 l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~--------~~~~lv~~~~~~~-~ 151 (371)
T PF00266_consen 81 LLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALN--------PDTRLVSISHVEN-S 151 (371)
T ss_dssp HHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHH--------TTESEEEEESBET-T
T ss_pred cccccccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhc--------cccceEEeecccc-c
Confidence 82 258999999999998887211 2244679999999888888999999999998 8999999966655 8
Q ss_pred CceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHH
Q 018240 150 GGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKAR 228 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~ 228 (359)
||...| +++|.++|+++|+++++|.+|++|... ..+..+ ++|++++|.+| |++|.| |+++.+++..++++
T Consensus 152 tG~~~p---i~~I~~~~~~~~~~~~vD~~~~~g~~~---id~~~~--~~D~~~~s~~K-l~gp~G~g~l~v~~~~~~~~~ 222 (371)
T PF00266_consen 152 TGVRNP---IEEIAKLAHEYGALLVVDAAQSAGCVP---IDLDEL--GADFLVFSSHK-LGGPPGLGFLYVRPEAIERLR 222 (371)
T ss_dssp TTBBSS---HHHHHHHHHHTTSEEEEE-TTTTTTSS-----TTTT--TESEEEEESTS-TTSSSTEEEEEEEHHHHHHHH
T ss_pred ccEEee---eceehhhhhccCCceeEechhcccccc---cccccc--ccceeeecccc-cCCCCchhhheehhhhhhccc
Confidence 999988 899999999999999999998776553 334444 78999999999 777888 99999998888863
Q ss_pred HHHHh---------------------hCCCcchhHHHHHHHHHHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEe
Q 018240 229 RLRKT---------------------LGGGMRQVGVLCAAALVAL----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVD 283 (359)
Q Consensus 229 ~~~~~---------------------~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~ 283 (359)
..... .+++. +.....+...++ +...+...++..++.+++.+.|++++++.+.
T Consensus 223 p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~--~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~ 300 (371)
T PF00266_consen 223 PAKPGGGYLDFPSLQEYGLADDARRFEGGTP--NVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVL 300 (371)
T ss_dssp TSSSSSSTTTHHHHHHHCHHSTTTGSSSSS----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEES
T ss_pred cccccccccccccchhcccccccccccccce--eeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEe
Confidence 11110 01122 112222222333 2334446677888899999999999888874
Q ss_pred cC---CccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC------------CcEEEEEeCCCCCHHHHHHH
Q 018240 284 VD---AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES------------STRVRIVVHHQISANDVHYT 342 (359)
Q Consensus 284 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~------------~~~lRi~~~~~~~~~~i~~~ 342 (359)
.+ .....++.+.++. .+..++.+.|.++||.+..+. .+++|++++..++++|++++
T Consensus 301 ~~~~~~~~~~i~~~~~~~---~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 301 GPDDEPRRPSIVSFNLPG---SDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp SSSCGGBGTTEEEEEETT---SSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred eecccccccceEEEeecC---CCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 32 3456677788865 478999999988899997642 26899999999999999975
No 170
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.97 E-value=4e-28 Score=213.39 Aligned_cols=300 Identities=22% Similarity=0.243 Sum_probs=208.7
Q ss_pred HHHHHHHHcCCC-CCCccCCChHHHHHHHHHH----HHhCCC----CeEEcCCchHHHHHHHHHhhhh-----------c
Q 018240 18 EAMRAAMASAEV-DDDVLMHDPTAFRLETEMA----KVMGKE----AGLFVPSGTMGNLISVLVHCET-----------R 77 (359)
Q Consensus 18 ~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~la----~~~~~~----~~~~~~~gt~a~~~~l~~~~~~-----------~ 77 (359)
..+.+.+..... ....|+.++...++|++++ +++|.+ ..++++|||+|+..++.+++.+ +
T Consensus 13 ~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~ 92 (345)
T cd06450 13 ALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRG 92 (345)
T ss_pred HHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccc
Confidence 344444444332 2334777777777777754 555875 4689999999999999988631 2
Q ss_pred --CCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecC
Q 018240 78 --GSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLS 155 (359)
Q Consensus 78 --g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~ 155 (359)
+..|+++.++|++... . +...|.+++.++.++++.+|+++|++.+++.... ..++++|++.+ ++||||.+.+
T Consensus 93 ~~~~~v~~~~~~h~~~~~-~--~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~--~~~~~~v~~~~-~~~~tG~~~~ 166 (345)
T cd06450 93 IDKLVIVCSDQAHVSVEK-A--AAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAE--GLNPIMVVATA-GTTDTGAIDP 166 (345)
T ss_pred cCCeEEEEcCcchhHHHH-H--HHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHC--CCCcEEEEEec-ccCCCCCCCC
Confidence 3378889999988654 2 5566889999988777889999999999731000 02677777744 5569999755
Q ss_pred hhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH-hhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHHh
Q 018240 156 VEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR-RLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRKT 233 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~-~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~ 233 (359)
+++|.++|+++|+++|+|++|+.+.......... .-..++|++++|+||++++|.| |+++.+
T Consensus 167 ---~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~------------- 230 (345)
T cd06450 167 ---LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR------------- 230 (345)
T ss_pred ---HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH-------------
Confidence 8999999999999999999986655432111110 1113688999999999988777 666544
Q ss_pred hCCCcchhHHHHHHHHHHH-HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccc--hHHHHHHHHHH
Q 018240 234 LGGGMRQVGVLCAAALVAL-QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITED--SKLYAACLLKK 310 (359)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 310 (359)
.....+++..+ ....++++++..++++++.+.|++++++++..+ ...+++.+.++.. .+.+..++.++
T Consensus 231 --------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~iv~f~~~~~~~~~~~~~~i~~~ 301 (345)
T cd06450 231 --------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGE-PNLSLVCFRLKPSVKLDELNYDLSDR 301 (345)
T ss_pred --------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CceeEEEEEECCcchhhHHHHHHHHH
Confidence 11112222222 233444777888899999999999988887543 4677888877651 03567789999
Q ss_pred HHhcCceeccC----CCcEEEEEeCCCC-CHHHHHHHHHHHHH
Q 018240 311 LEEHGVLVMPE----SSTRVRIVVHHQI-SANDVHYTLSCFQK 348 (359)
Q Consensus 311 l~~~gi~~~~~----~~~~lRi~~~~~~-~~~~i~~~~~~l~~ 348 (359)
|.++|+.+.+. ...++|++++..+ +++|++++++.|++
T Consensus 302 L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 302 LNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred HHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 98887655332 3568999998664 99999999999975
No 171
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.97 E-value=7.7e-28 Score=215.63 Aligned_cols=322 Identities=15% Similarity=0.148 Sum_probs=214.7
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCCCCccCC-----Ch----HHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHH
Q 018240 4 RTVDLRSDTVTKPTEAMRAAMASAEVDDDVLMH-----DP----TAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-----~~----~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~ 72 (359)
.++++...++..++|.+..+..........|.. .. ...++++.+++++|.+ ..+++++|+++...++..
T Consensus 21 ~~~~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~ 100 (398)
T cd00613 21 SMSFLGSGTYKHNPPAVIKRNILENEFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLA 100 (398)
T ss_pred CcccccccccCCcCcHHHHHHhccccCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHH
Confidence 347888888888887666654433212222332 22 3356777788888887 456777777666666655
Q ss_pred hhhhc--CCeEEecCCCcceeeccccccccCC----ccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018240 73 HCETR--GSEVILGDNSHIHIYENGGISTIGG----VHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 73 ~~~~~--g~~vl~~~~~~~~~~~~~~~~~~~g----~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
+...+ |++|+++++.|.+... .+...+ .+++.++.++++.+|++++++.+. +++++|+++++
T Consensus 101 ~~~~~~~gd~Vl~~~~~h~~~~~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~--------~~t~~viv~~~- 168 (398)
T cd00613 101 AIRAYHKRNKVLVPDSAHPTNPA---VARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVS--------EEVAALMVQYP- 168 (398)
T ss_pred HHhcccCCCEEEEcCccCcchHH---HHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcC--------CCeEEEEEECC-
Confidence 55445 9999999999988754 133333 788888877677889999999998 78999999664
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCC-----CceeeEEecCH
Q 018240 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLG-----APVGSVIVGSK 221 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g-----~~~gg~~~~~~ 221 (359)
+ ++|.+.+ .+++|+++|++||+++|+|++|..+... ..... .++|+++.|+||+++ +|.+|+++.++
T Consensus 169 ~-~~G~~~~--~l~~i~~la~~~g~~livD~~~~~~~~~---~~~~~--~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~ 240 (398)
T cd00613 169 N-TLGVFED--LIKEIADIAHSAGALVYVDGDNLNLTGL---KPPGE--YGADIVVGNLQKTGVPHGGGGPGAGFFAVKK 240 (398)
T ss_pred C-CCceecc--hHHHHHHHHHhcCCEEEEEeccccccCC---CChHH--cCCCEEEeeccccCCCCCCCCCceeEEEEhh
Confidence 4 7899843 5799999999999999999987543321 11122 278999999999982 23448888888
Q ss_pred HHHHHHHHH------------------H---------HhhCCCcchhHHHHHHHHHHH----HHhHHHHhhhHHHHHHHH
Q 018240 222 EFIKKARRL------------------R---------KTLGGGMRQVGVLCAAALVAL----QENVLVMLDGDHKKAKLL 270 (359)
Q Consensus 222 ~~~~~~~~~------------------~---------~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~l 270 (359)
++.+.+... . ...............++...+ +...++..++..++++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l 320 (398)
T cd00613 241 ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYL 320 (398)
T ss_pred hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 777653110 0 000001111122222222222 234444677888999999
Q ss_pred HHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccC---CCcEEEEEeCCCCCHHHHHHHHHHH
Q 018240 271 AEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE---SSTRVRIVVHHQISANDVHYTLSCF 346 (359)
Q Consensus 271 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~---~~~~lRi~~~~~~~~~~i~~~~~~l 346 (359)
++.|+++++... ........+++.++...+.+..++.+.|.++||.+... +...+|++++..++++|+|++++.|
T Consensus 321 ~~~L~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 321 AKRLKEVGGVLP-FNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred HHHHHhcCCccc-CCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccccCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 999999844332 11122334566665311247789999999999987442 5678999999999999999998864
No 172
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.97 E-value=1.9e-27 Score=213.03 Aligned_cols=328 Identities=16% Similarity=0.149 Sum_probs=220.8
Q ss_pred cccccccCCCCC----ChHHHHHHHHHcCCCCCCc---cCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018240 3 TRTVDLRSDTVT----KPTEAMRAAMASAEVDDDV---LMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~~~~----~~~~~~~~a~~~~~~~~~~---~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.+++||.++... ..+|.+.+++.+....... ....+....+++.++++++.+.+++++||++|+..++..++.
T Consensus 31 ~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SGs~A~e~al~~~~~ 110 (400)
T PTZ00125 31 KKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLFGYDKVLPMNSGAEAGETALKFARK 110 (400)
T ss_pred CEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHH
Confidence 357899886333 3468999988875432111 112567788999999999888889999999999999998752
Q ss_pred h---------cCCeEEecCCC-cceeeccccccccCCcc------------ceeeecCCCCCCCHHHHHHHhcCCCCCcc
Q 018240 76 T---------RGSEVILGDNS-HIHIYENGGISTIGGVH------------PRTVKNNQDGTMDIDLIEAAIRDPKGEIV 133 (359)
Q Consensus 76 ~---------~g~~vl~~~~~-~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~~~~~~l~~~l~~~~~~~~ 133 (359)
. .+++|+..+.+ |..... . ....+.. +..++. .|++++++.++.
T Consensus 111 ~~~~~~~~~~~~~~vl~~~~~~Hg~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~------ 176 (400)
T PTZ00125 111 WGYEVKGIPENQAKIIFCNGNFSGRTIG--A-CSASTDPKCYNNFGPFVPGFELVDY-----NDVEALEKLLQD------ 176 (400)
T ss_pred HHHhccCCCCCCCeEEEECCCcCCccHH--H-HhhcCCcchhccCCCCCCCceEeCC-----CCHHHHHHHhCC------
Confidence 1 23566655554 444332 1 2221211 112222 289999999863
Q ss_pred CCceeEEEEeccccCCCceecC-hhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH-h-hhcCccEEEEeccccCC
Q 018240 134 YPTTRLICLENTHANCGGRCLS-VEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR-R-LVQAADSASVCLSKGLG 210 (359)
Q Consensus 134 ~~~~~~v~i~~~~~~ptG~~~~-~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~-~-~~~~~d~~~~s~~K~~g 210 (359)
+++++|+++++ +||||..++ .+++++|.++|++||+++|+||+|.. ++..+.... . ....+|+++ ++|+++
T Consensus 177 -~~~~~v~~ep~-~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g--~g~~G~~~~~~~~~~~pd~~~--~sK~l~ 250 (400)
T PTZ00125 177 -PNVAAFIVEPI-QGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTG--LGRTGKLLAHDHEGVKPDIVL--LGKALS 250 (400)
T ss_pred -CCeEEEEEcCc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCccchhhHHHhcCCCCCEEE--Eccccc
Confidence 57899999776 569999886 46799999999999999999999742 222232111 1 112456654 569997
Q ss_pred Cce-e-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC----CCceEe
Q 018240 211 APV-G-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL----KGLRVD 283 (359)
Q Consensus 211 ~~~-g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~----~g~~~~ 283 (359)
++. . |+++.++++.+.+.... .+.++..++..++++..+++...+ ...++..++.+++++.|+++ +.+...
T Consensus 251 ~g~~~ig~v~~~~~~~~~~~~~~--~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 328 (400)
T PTZ00125 251 GGLYPISAVLANDDVMLVIKPGE--HGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELLKKSPWVKEI 328 (400)
T ss_pred CCCcCcEEEEEcHHHHhhccCCC--CCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 644 3 77888999888764322 233334455666666666654332 23445556667777777653 222222
Q ss_pred cCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 284 VDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
...+.+.++.++.+...+..++.+.|.++||.+.|.+...+|++++..++++++++++++|.++++++.
T Consensus 329 --~~~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 329 --RGKGLLNAIVFDHSDGVNAWDLCLKLKENGLLAKPTHDNIIRFAPPLVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred --ecccEEEEEEEccCcchHHHHHHHHHHHCCeEEeecCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 236677777776422356778999999999999998888999999888999999999999999998874
No 173
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.97 E-value=7.5e-28 Score=209.55 Aligned_cols=301 Identities=13% Similarity=0.068 Sum_probs=210.7
Q ss_pred ccccccCCCCC-ChH-HHH-HHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC--eEEcCCchHHHHHHHHHhhhhcC
Q 018240 4 RTVDLRSDTVT-KPT-EAM-RAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA--GLFVPSGTMGNLISVLVHCETRG 78 (359)
Q Consensus 4 ~~id~~~~~~~-~~~-~~~-~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l~~~~~~~g 78 (359)
..+||+++-+. +|+ +.+ ..++. .|. .+. .+|++.+++++|.+. .+++++|++..+..+..++ ++|
T Consensus 25 ~~i~ls~Nenp~~~~~~~~~~~~~~-------~Yp-~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~~~-~~g 94 (339)
T PRK06959 25 AWLDLSTGINPHGYPVPPVPADAWR-------RLP-EDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPALL-PRG 94 (339)
T ss_pred hhceeccCCCCCCCCCCCCCHHHHH-------hCC-Cch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHHhc-CCC
Confidence 35889888555 333 221 11221 143 344 899999999999963 5777887776666666665 466
Q ss_pred CeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhh
Q 018240 79 SEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEY 158 (359)
Q Consensus 79 ~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~ 158 (359)
+ |+++.|+|.. +. ..++..|++++.++.+. + .+. ..++++++++| |||||.+++.++
T Consensus 95 ~-v~v~~P~y~~-y~--~~~~~~g~~~~~v~~~~------~----~~~--------~~~~~v~l~nP-nNPTG~~~s~~~ 151 (339)
T PRK06959 95 R-VGIAPLAYSE-YA--PAFARHGHRVVPLDEAA------D----TLP--------AALTHLIVVNP-NNPTAERLPAAR 151 (339)
T ss_pred e-EEEcCCCcHH-HH--HHHHHCCCEEEeecccc------h----hcc--------ccCCEEEEeCC-CCCCCCCCCHHH
Confidence 5 8899999655 44 34778898888886531 1 222 34457777565 679999999999
Q ss_pred HHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEE-eccccCCCcee--eEEecCHHHHHHHHHHHHhhC
Q 018240 159 TDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASV-CLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLG 235 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~-s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~ 235 (359)
++++++.|++++.++|+||+|..... ..+...+....+++++ |+||.||.|+. ||+++++++++.++.....++
T Consensus 152 l~~l~~~~~~~~~~vI~DEay~~~~~---~~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~~~~~~~ 228 (339)
T PRK06959 152 LLRWHAQLAARGGTLIVDEAFADTLP---AASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAALRDALGAWT 228 (339)
T ss_pred HHHHHHHHHHcCCEEEEECCCccCCC---cccchhccCCCCEEEEecChhhcCCcchheEEEecCHHHHHHHHHhcCCCC
Confidence 99999999999999999999643221 1223233222335555 99999996544 999999999999877654332
Q ss_pred CCcchhHHHHHHHHHHH--HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHh
Q 018240 236 GGMRQVGVLCAAALVAL--QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEE 313 (359)
Q Consensus 236 ~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 313 (359)
.+...+.++...+ ..+.++.++++.++++++.+.|+++ |+.+. ..++++|+.++ +..++.+.|.+
T Consensus 229 ----vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~---~~~~f~~~~~~-----~~~~l~~~l~~ 295 (339)
T PRK06959 229 ----VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH-GFAVH---ATPLFSWTDDP-----RAAALHAALAR 295 (339)
T ss_pred ----CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcc---CcceEEEEeCC-----CHHHHHHHHHh
Confidence 2344455555555 3444556677888899999999998 87763 24677888764 34678999999
Q ss_pred cCceeccC-CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 314 HGVLVMPE-SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 314 ~gi~~~~~-~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
+||.+... ...++||++ ..+.++.++++++|+++++.+..
T Consensus 296 ~GI~vr~~~~~~~lRisi--~~~~~e~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 296 RGIWTRYFAPPPSVRFGL--PADEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred CCeEEEECCCCCeEEEEC--CCCHHHHHHHHHHHHHHHHHHhh
Confidence 99999654 346899998 35778999999999988877653
No 174
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.97 E-value=2.2e-27 Score=210.34 Aligned_cols=287 Identities=24% Similarity=0.233 Sum_probs=207.8
Q ss_pred CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCC
Q 018240 36 HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDG 114 (359)
Q Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 114 (359)
..|....+|+.+++++|.+.+++++||+.|+..++..++ ++||+|+++.+.|...+... ..+...|+++..++..
T Consensus 63 ~~p~~~~le~~lA~l~g~~~~i~~~sG~~Al~~~l~~ll-~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~--- 138 (403)
T PRK07503 63 SNPTLALLEQRMASLEGGEAAVALASGMGAITATLWTLL-RPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLT--- 138 (403)
T ss_pred CCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHc-CCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCC---
Confidence 367789999999999999999999999999999988876 69999999999876544200 1245578888888654
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh
Q 018240 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
|++++++.++ +++++|+++++ +||||.+.+ +++|.++|+++|+++|+|++|+.+.. +.+ +
T Consensus 139 --d~~~l~~~i~--------~~tklV~le~p-~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~---~~~---l 198 (403)
T PRK07503 139 --DPAALKAAIS--------DKTRMVYFETP-ANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYL---QRP---L 198 (403)
T ss_pred --CHHHHHHhcC--------ccCcEEEEeCC-CCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc---CCc---h
Confidence 8899999998 78999999765 559999887 89999999999999999999754321 222 2
Q ss_pred hcCccEEEEeccccCCCce---eeEEecCHHHHHHHHHH--HHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHH
Q 018240 195 VQAADSASVCLSKGLGAPV---GSVIVGSKEFIKKARRL--RKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKL 269 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~~---gg~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 269 (359)
..++|+++.|++|+++++. ||+++.++++.++++.. ....+ ..+++..++.+...++.... +.++..+++..
T Consensus 199 ~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g--~~~s~~~a~l~l~~L~tl~~-r~~~~~~na~~ 275 (403)
T PRK07503 199 ELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTG--AVMSPFDAFLLMRGLKTLAL-RMDRHCASAQA 275 (403)
T ss_pred hhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcC--CCCCHHHHHHHHcCcchHHH-HHHHHHHHHHH
Confidence 2378999999999998754 68888889888887643 33334 33466777777777776655 77788899999
Q ss_pred HHHHHhcCCCce-EecCC---------------ccceEEEEEeccchHHHHHHHHHHHHhcCcee----------ccC--
Q 018240 270 LAEGLNQLKGLR-VDVDA---------------VETNIVYFEITEDSKLYAACLLKKLEEHGVLV----------MPE-- 321 (359)
Q Consensus 270 l~~~l~~~~g~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~----------~~~-- 321 (359)
+.+.|++.|.++ +..|. ..+.++.+.++.. ......|.+.|+-..... .|.
T Consensus 276 ~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~-~~~~~~~~~~l~l~~~~~slG~~~sl~~~~~~~ 354 (403)
T PRK07503 276 VAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGG-IAAGRRFMNALQLFARAVSLGDAESLAQHPASM 354 (403)
T ss_pred HHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCC-HHHHHHHHHhCCcceeecccCCCCccCcCCCCC
Confidence 999999987664 22221 1355677777642 224456666553221111 010
Q ss_pred ---------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 322 ---------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 322 ---------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
..+.+|+++. + |+++++++-|+++++...
T Consensus 355 ~h~~~~~~~~~~~gi~~~liR~svG--l--E~~~dl~~dl~~Al~~~~ 398 (403)
T PRK07503 355 THSTYTPEERAEHGISEGLVRLSVG--L--EDVADILADLAQALDACA 398 (403)
T ss_pred ccccCCHHHHHhcCCCCCeEEEEEe--c--CCHHHHHHHHHHHHHHHH
Confidence 1346999995 3 577777777777776654
No 175
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.97 E-value=2.6e-27 Score=202.97 Aligned_cols=339 Identities=20% Similarity=0.268 Sum_probs=246.7
Q ss_pred cccccCCCCCC-hHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEe
Q 018240 5 TVDLRSDTVTK-PTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVIL 83 (359)
Q Consensus 5 ~id~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~ 83 (359)
+|||.||+.+. |+++++++|.. ++..|+.+|...+|++.++++||.+..+.+.+|+.+...+...++..+|+++.+
T Consensus 43 ~IDLrSDTgT~apS~~m~aAM~~---GDD~Y~gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~~~g~e~g~ 119 (467)
T TIGR02617 43 FIDLLTDSGTGAVTQSMQAAMMR---GDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGL 119 (467)
T ss_pred EEECccCCCCCCCCHHHHHHHHc---CCcccccCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhcccccccccc
Confidence 59999999995 99999999997 788899999999999999999999999999999999999998888557887776
Q ss_pred cCC----Ccceeecc-ccccccCCccceeee----------cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccC
Q 018240 84 GDN----SHIHIYEN-GGISTIGGVHPRTVK----------NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHAN 148 (359)
Q Consensus 84 ~~~----~~~~~~~~-~~~~~~~g~~~~~v~----------~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ 148 (359)
... .|...+.. ++.+.+.|+.++.+. .+.+|.+|+++|++.|+.... .++..+...-++|.
T Consensus 120 ~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~----~~i~~v~~tlt~N~ 195 (467)
T TIGR02617 120 DRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP----NNVPYIVATITCNS 195 (467)
T ss_pred cccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC----CCceeeeeeEEEec
Confidence 554 34444442 245778888777652 234588999999999985311 12333333333454
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEecccccc-hh-------hhcCchhHhhh----cCccEEEEeccccCCCceeeE
Q 018240 149 CGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFN-AA-------VALGVPVRRLV----QAADSASVCLSKGLGAPVGSV 216 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~-~~-------~~~~~~~~~~~----~~~d~~~~s~~K~~g~~~gg~ 216 (359)
-+|.++|.+.++++.++|++||+.++.|+|..+. +. .+.+.+..++. ..+|.+++|++|.+|.|.||+
T Consensus 196 ~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvGg~ 275 (467)
T TIGR02617 196 AGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMGGL 275 (467)
T ss_pred CCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCcccce
Confidence 5799999999999999999999999999998774 32 35567766664 789999999999999999999
Q ss_pred EecCHH----HHHHHHHHHHhh-CCCc--chhHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhcCCCceEecCCcc
Q 018240 217 IVGSKE----FIKKARRLRKTL-GGGM--RQVGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVE 288 (359)
Q Consensus 217 ~~~~~~----~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 288 (359)
++++++ +.++++.....+ |..+ .+++-...+...+|++.. ++.+.......++|.+.|.+. |+.++. .+
T Consensus 276 Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~~~-Gvpi~~--~G 352 (467)
T TIGR02617 276 LCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLEEI-GVVCQQ--AG 352 (467)
T ss_pred EEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHhC-CCcEEe--cC
Confidence 988544 334443322211 1111 123444444444564433 346667778889999999998 998864 34
Q ss_pred ceEEEEE-------eccchHHHHHHHHHHH-HhcCceeccC-----------------CCcEEEEEe-CCCCCHHHHHHH
Q 018240 289 TNIVYFE-------ITEDSKLYAACLLKKL-EEHGVLVMPE-----------------SSTRVRIVV-HHQISANDVHYT 342 (359)
Q Consensus 289 ~~~~~~~-------~~~~~~~~~~~~~~~l-~~~gi~~~~~-----------------~~~~lRi~~-~~~~~~~~i~~~ 342 (359)
+.-+++. ++. ....+..+..+| .+.||..+.- .-..+|+.+ .-..|.+++|..
T Consensus 353 ghav~iDa~~~lphip~-~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v 431 (467)
T TIGR02617 353 GHAAFVDAGKLLPHIPA-DQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFI 431 (467)
T ss_pred ccEEEEehhhhCCCCCh-hhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccccccccHhHHHHH
Confidence 4445543 333 335677888899 8888875221 124589874 334688999999
Q ss_pred HHHHHHHHHHHH
Q 018240 343 LSCFQKIYAGVC 354 (359)
Q Consensus 343 ~~~l~~~~~~~~ 354 (359)
++++..+.++-.
T Consensus 432 ~~~~~~~~~~~~ 443 (467)
T TIGR02617 432 IEAFKHVKENAP 443 (467)
T ss_pred HHHHHHHHhhhh
Confidence 999998887644
No 176
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.97 E-value=9.5e-28 Score=213.63 Aligned_cols=324 Identities=19% Similarity=0.184 Sum_probs=219.7
Q ss_pred cccccccCC---CCCChH-HHHHHHHHcCCCCC----CccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhh
Q 018240 3 TRTVDLRSD---TVTKPT-EAMRAAMASAEVDD----DVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHC 74 (359)
Q Consensus 3 ~~~id~~~~---~~~~~~-~~~~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~ 74 (359)
.++|||.++ ++.++. |.+.+++.+..... ..| ..+...++++.+++++|.+..++++||++|+..++..+.
T Consensus 27 ~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~g~~~~~~~~sg~~a~~~a~~~~~ 105 (379)
T TIGR00707 27 KEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLY-YTEPQEELAEKLVEHSGADRVFFCNSGAEANEAALKLAR 105 (379)
T ss_pred CEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccccccc-CCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHH
Confidence 457999984 444444 88888887754321 222 467789999999999999988999999999999998663
Q ss_pred h--h----cCCeEEecCCCcceeeccccccccCCcccee----eecCCCCC----CCHHHHHHHhcCCCCCccCCceeEE
Q 018240 75 E--T----RGSEVILGDNSHIHIYENGGISTIGGVHPRT----VKNNQDGT----MDIDLIEAAIRDPKGEIVYPTTRLI 140 (359)
Q Consensus 75 ~--~----~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~----v~~~~~~~----~~~~~l~~~l~~~~~~~~~~~~~~v 140 (359)
. . ++++|++++++|..... . ....+..... .+...+.. .|++.+++.++ +++++|
T Consensus 106 ~~~~~~~~~~~~vi~~~~~yh~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~--------~~~~~v 174 (379)
T TIGR00707 106 KYTGDKGKEKKKIIAFENSFHGRTM-G--ALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAID--------DETAAV 174 (379)
T ss_pred HHhhccCCCCCeEEEECCCcCCccH-H--HHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhh--------hCeeEE
Confidence 1 1 26899999888644322 1 1111111110 11111111 18999999988 678899
Q ss_pred EEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc--hhHhhhcCccEEEEeccccCCCcee-eE
Q 018240 141 CLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV--PVRRLVQAADSASVCLSKGLGAPVG-SV 216 (359)
Q Consensus 141 ~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~~d~~~~s~~K~~g~~~g-g~ 216 (359)
++++ .++++|.. ++.+++++|.++|+++|+++|+||+|.. +...+. .........|++ ++||.++.+.. |+
T Consensus 175 ~~~p-~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~--~~~~g~~~~~~~~~~~~d~~--t~sK~~~~G~riG~ 249 (379)
T TIGR00707 175 IVEP-IQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTG--IGRTGKFFAYEHYGIEPDII--TLAKGLGGGVPIGA 249 (379)
T ss_pred EEEc-cccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCccchhhhHHhcCCCCCEE--EEcccccCCcccEE
Confidence 9955 46688864 6889999999999999999999999752 222222 111222234544 67899984333 78
Q ss_pred EecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhcCCCceE--ecCCccceEEE
Q 018240 217 IVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQLKGLRV--DVDAVETNIVY 293 (359)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~~~g~~~--~~~~~~~~~~~ 293 (359)
+++++++++.+..... +.++..++..++++..+++... ....++..++++++++.|+++ +... ...+..+.+++
T Consensus 250 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~g~~~~ 326 (379)
T TIGR00707 250 TLAKEEVAEAFTPGDH--GSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEEL-GKNYPNKEVRGKGLMLG 326 (379)
T ss_pred EEEcHHHHhhhcCCCC--CCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-HhhCCCCccccCceEEE
Confidence 8889888888654222 2223335566666666665322 235566777778888887765 2221 11123677888
Q ss_pred EEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 294 FEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 294 ~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
+.++. +..++.+.|.++||.+.|.+..++|++++...+++++++++++|++++
T Consensus 327 ~~~~~----~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 327 IELEA----PCKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred EEecC----cHHHHHHHHHHCCcEEeeCCCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 88765 357899999999999999877899999987899999999999998753
No 177
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.8e-27 Score=207.04 Aligned_cols=300 Identities=16% Similarity=0.117 Sum_probs=205.2
Q ss_pred ccccccCCCCCC-hHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhCC---C-CeEEcCCchH-HHHHHHHHhhh
Q 018240 4 RTVDLRSDTVTK-PTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMGK---E-AGLFVPSGTM-GNLISVLVHCE 75 (359)
Q Consensus 4 ~~id~~~~~~~~-~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~~---~-~~~~~~~gt~-a~~~~l~~~~~ 75 (359)
..|+|..+.+.. |++.+.+++.+.... ...|. .++..++++.++++++. + ..+++++|++ ++..++.. +
T Consensus 20 ~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~-~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~-~- 96 (335)
T PRK14808 20 DRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYY-DSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLM-F- 96 (335)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCC-CCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHH-h-
Confidence 458888775554 458888888765432 12243 35789999999999983 2 2466666654 55555444 3
Q ss_pred hcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecC
Q 018240 76 TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLS 155 (359)
Q Consensus 76 ~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~ 155 (359)
+.|++++|+|.... ..++..|.+++.++.+.++.++... ++ .++++++ +.+|||||.+++
T Consensus 97 ---d~v~v~~P~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~~~----~~---------~~~~i~i-~nP~NPTG~~~s 156 (335)
T PRK14808 97 ---DRSVFFPPTYSCYR---IFAKAVGAKFLEVPLTKDLRIPEVN----VG---------EGDVVFI-PNPNNPTGHVFE 156 (335)
T ss_pred ---CcEEECCCCHHHHH---HHHHHcCCeEEEecCCCcCCCChhH----cc---------CCCEEEE-eCCCCCCCCCcC
Confidence 56999999976644 3488899999999877666554321 22 3567777 566779999999
Q ss_pred hhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh-cCccEEEE-eccccCCCcee--eEEecCHHHHHHHHHHH
Q 018240 156 VEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV-QAADSASV-CLSKGLGAPVG--SVIVGSKEFIKKARRLR 231 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~d~~~~-s~~K~~g~~~g--g~~~~~~~~~~~~~~~~ 231 (359)
.+++++|+ +++++||+||+|... . +.+..+.. ....++++ |+||.+|.++. ||+++++++++.+....
T Consensus 157 ~~~l~~l~----~~~~~ii~DE~Y~~f--~--~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~ 228 (335)
T PRK14808 157 REEIERIL----KTGAFVALDEAYYEF--H--GESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVR 228 (335)
T ss_pred HHHHHHHH----hcCCEEEEECchhhh--c--CCchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhc
Confidence 87776665 489999999996432 1 21222221 12245554 99999996543 99999999999887655
Q ss_pred HhhCCCcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHH
Q 018240 232 KTLGGGMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLK 309 (359)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (359)
..++ . +.....++..+++ +...+..+...++++.+.+.|++. |+++. ++.++|+|+.++.. +..++.+
T Consensus 229 ~~~~--~--~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~g~f~~~~l~~~---~~~~~~~ 298 (335)
T PRK14808 229 LPFN--V--SYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYRIT--DSRGNFVFIFMEKE---EKERLLE 298 (335)
T ss_pred CCCC--C--CHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEC--CCCCeEEEEeCCCc---cHHHHHH
Confidence 3322 2 2333344444443 223335556667788899999988 88764 34788999998752 5578999
Q ss_pred HHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018240 310 KLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 310 ~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
+|.++||.+... ..++||++ .+.++.+++++.|++
T Consensus 299 ~l~~~Gi~V~~~-~~~~Risi---~~~~~~~~~~~~l~~ 333 (335)
T PRK14808 299 HLRAKNIAVRSF-REGVRITI---GKREENDMILKELEV 333 (335)
T ss_pred HHHHCCeEEEEC-CCCeEEec---CCHHHHHHHHHHHHh
Confidence 999999999765 36799998 467899999998874
No 178
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.96 E-value=3.2e-27 Score=209.01 Aligned_cols=286 Identities=19% Similarity=0.199 Sum_probs=211.2
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.|....+|+.+++++|.+.++++++|+.|+..++..++ ++||+|+++.+.|.+..... ......|++++.++.
T Consensus 64 ~p~~~~Le~~lA~l~G~~~~~~~~sG~~Ai~~~l~~~l-~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~----- 137 (398)
T PRK07504 64 NPTVDMFEKRMCALEGAEDARATASGMAAVTAAILCQV-KAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDG----- 137 (398)
T ss_pred CchHHHHHHHHHHHhCCCeeeEecCHHHHHHHHHHHHh-CCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECC-----
Confidence 57789999999999999999899999999988887777 59999999999877643200 113456878777752
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
+|++++++.++ +++++|+++++.| |+|.+.+ +++|.++|+++|+++|+|++|+.+.. . . +..
T Consensus 138 ~d~e~l~~ai~--------~~tklV~lesp~N-ptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~---~-~--~~~ 199 (398)
T PRK07504 138 LDLDNWEKAVR--------PNTKVFFLESPTN-PTLEVID---IAAVAKIANQAGAKLVVDNVFATPLF---Q-K--PLE 199 (398)
T ss_pred CCHHHHHHhcC--------cCceEEEEECCCC-CCcEecC---HHHHHHHHHHcCCEEEEECCcccccc---C-C--chh
Confidence 58999999998 7899999977655 9999988 89999999999999999999754332 1 1 122
Q ss_pred cCccEEEEeccccCCCc---eeeEEecCHHHHH-HHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHH
Q 018240 196 QAADSASVCLSKGLGAP---VGSVIVGSKEFIK-KARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLA 271 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~---~gg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 271 (359)
.++|+++.|+||+++++ .||+++++++.+. .++......+... ++..++.++.+++.... ++++..+++..+.
T Consensus 200 ~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~--s~~~A~~~l~~L~tl~~-R~~~~~~na~~la 276 (398)
T PRK07504 200 LGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSL--SPFNAWTLLKGLETLPV-RVRQQTESAAAIA 276 (398)
T ss_pred hCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCC--CHHHHHHHHhccchHHH-HHHHHHHHHHHHH
Confidence 37899999999999764 4678888777664 3444444455443 66777788888887766 8888889999999
Q ss_pred HHHhcCCCce-EecCC---------------ccceEEEEEeccchHHHHHHHHHHHHhcCceec----------cC----
Q 018240 272 EGLNQLKGLR-VDVDA---------------VETNIVYFEITEDSKLYAACLLKKLEEHGVLVM----------PE---- 321 (359)
Q Consensus 272 ~~l~~~~g~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----------~~---- 321 (359)
+.|++.|++. +..|. ..+.++.|.+.. .......|.+.|+--.+.+. |.
T Consensus 277 ~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~~~~~l~~~~~~~slG~~~sl~~~p~~~~~ 355 (398)
T PRK07504 277 DFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKG-GKEAAFRFLNALKIVRISNNLGDAKSLITHPATTTH 355 (398)
T ss_pred HHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCC-CHHHHHHHHHhCCcceecccCCCCCeeeeCCCCCCc
Confidence 9999987764 32221 236688888864 23456677777754333221 11
Q ss_pred -------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 322 -------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 322 -------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
..+.+|+++. + |+.+.+++.|+++++++.
T Consensus 356 ~~~~~~~~~~~gi~~~liR~svG--l--E~~~dl~~dl~~al~~~~ 397 (398)
T PRK07504 356 KNLSPEARAELGISEGFLRLSAG--L--EDTDDLIEDLAAALKKVR 397 (398)
T ss_pred ccCCHHHHHhcCCCCCeEEEEec--c--CCHHHHHHHHHHHHHhhh
Confidence 2346999985 3 577888888888887653
No 179
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.96 E-value=1.3e-27 Score=215.36 Aligned_cols=337 Identities=19% Similarity=0.198 Sum_probs=225.6
Q ss_pred cccccccCCC----CCChHHHHHHHHHcCCCCCCccC----CChHHHHHHHHHHHHhC--CCCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSDT----VTKPTEAMRAAMASAEVDDDVLM----HDPTAFRLETEMAKVMG--KEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~----~~~~~~~~~~a~~~~~~~~~~~~----~~~~~~~l~~~la~~~~--~~~~~~~~~gt~a~~~~l~~ 72 (359)
.++|||.+++ ....+|.+.+++.+.......|. ..+...++++.++++++ .+..++++||++|+..++..
T Consensus 36 ~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~ 115 (413)
T cd00610 36 NRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKL 115 (413)
T ss_pred CEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHH
Confidence 3578998752 22356888888877553322222 36678999999999998 55678999999999999998
Q ss_pred hhh-hcCCeEEecCCCcceeeccccccccC------------CccceeeecCC------CCCCCHHHHHHHhcCCCCCcc
Q 018240 73 HCE-TRGSEVILGDNSHIHIYENGGISTIG------------GVHPRTVKNNQ------DGTMDIDLIEAAIRDPKGEIV 133 (359)
Q Consensus 73 ~~~-~~g~~vl~~~~~~~~~~~~~~~~~~~------------g~~~~~v~~~~------~~~~~~~~l~~~l~~~~~~~~ 133 (359)
+.. .++++|++.+++|..... ...... ..+++.++.+. ++..|++.|++.++++.
T Consensus 116 ~~~~~~~~~ii~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---- 189 (413)
T cd00610 116 ARAYTGRKKIISFEGAYHGRTL--GALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHP---- 189 (413)
T ss_pred HHHHcCCCeEEEECCCcCCccH--HHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCC----
Confidence 752 367888888876655432 112211 22345555542 23348889999888421
Q ss_pred CCceeEEEEeccccCCCceec-ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCc
Q 018240 134 YPTTRLICLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAP 212 (359)
Q Consensus 134 ~~~~~~v~i~~~~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~ 212 (359)
.+++++++++ .++++|..+ +.+++++|.++|++||+++|+||+|........+.........+|++ +++|+++++
T Consensus 190 -~~~~~vi~~p-~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~--t~sK~l~~g 265 (413)
T cd00610 190 -EEVAAVIVEP-IQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIV--TLGKGLGGG 265 (413)
T ss_pred -CCEEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCeE--EEcccccCc
Confidence 3577888855 555889866 66889999999999999999999985321111111111121234544 667999764
Q ss_pred ee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcCC---CceEecCCc
Q 018240 213 VG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQLK---GLRVDVDAV 287 (359)
Q Consensus 213 ~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~~---g~~~~~~~~ 287 (359)
.. |++++++++++.+.........++..++..++++..+++...+ +..++..++.+++++.|+++. +... ....
T Consensus 266 ~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~ 344 (413)
T cd00610 266 LPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRELAEKHPLVG-DVRG 344 (413)
T ss_pred cccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEE-Eeec
Confidence 33 6778888888875111122233444556666666666654332 356677778888888887651 1111 1134
Q ss_pred cceEEEEEeccch------HHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 288 ETNIVYFEITEDS------KLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 288 ~~~~~~~~~~~~~------~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
.+.++++.+.... ......+.+.|.++||.+.+++...+|++++..++++++++++++|++++
T Consensus 345 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 345 RGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSGGNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred CceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 6788888876521 14677899999999999998877899999998899999999999998753
No 180
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.96 E-value=3.6e-27 Score=209.23 Aligned_cols=300 Identities=19% Similarity=0.244 Sum_probs=220.0
Q ss_pred cCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC-C
Q 018240 34 LMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN-Q 112 (359)
Q Consensus 34 ~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~ 112 (359)
+..++...++|+.+++++|.++++.++||++|+..++.++..++||+|+++.++|.+... .+...|++++.++.+ +
T Consensus 25 ~~~g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~---~~~~~G~~~~~~~~~~~ 101 (380)
T TIGR03588 25 LTQGPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATAN---CALYCGAKVDFVDIDPD 101 (380)
T ss_pred ccCChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH---HHHHcCCEEEEEecCCC
Confidence 455678899999999999999999999999999999998833699999999999877654 266789999999874 4
Q ss_pred CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH
Q 018240 113 DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR 192 (359)
Q Consensus 113 ~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~ 192 (359)
++.+|++++++.+++.. .+++++|++.+ ++|...+ +++|.++|++||++||+|++|++|.. ..+....
T Consensus 102 ~~~~d~~~l~~~i~~~~----~~~t~~v~~~~----~~G~~~~---~~~i~~l~~~~~~~lI~D~a~a~g~~-~~~~~~g 169 (380)
T TIGR03588 102 TGNIDEDALEKKLAAAK----GKLPKAIVPVD----FAGKSVD---MQAIAALAKKHGLKIIEDASHALGAE-YGGKPVG 169 (380)
T ss_pred cCCcCHHHHHHHhhccc----CCCceEEEEeC----CCCccCC---HHHHHHHHHHcCCEEEEECCCcccCc-cCCEeCC
Confidence 67789999999998321 03577887633 5687665 89999999999999999999988765 2333222
Q ss_pred hhhcCccEEEEecc--ccCCCceeeEEe-cCHHHHHHHHHHHHh-----------------------hCCCcchhHHHHH
Q 018240 193 RLVQAADSASVCLS--KGLGAPVGSVIV-GSKEFIKKARRLRKT-----------------------LGGGMRQVGVLCA 246 (359)
Q Consensus 193 ~~~~~~d~~~~s~~--K~~g~~~gg~~~-~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~ 246 (359)
.. ...|+.++|+| |+++.+.||+++ .++++.++++.++.. .|.+..++.+.++
T Consensus 170 ~~-~~~d~~~~S~~~~K~~~~~~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa 248 (380)
T TIGR03588 170 NC-RYADATVFSFHPVKIITTAEGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAA 248 (380)
T ss_pred Cc-cccceEEEecCCCCcccccCceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHH
Confidence 11 14588888876 999877776555 468888877654331 1223445666667
Q ss_pred HHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCc---cceEEE-EEeccchHHHHHHHHHHHHhcCceec---
Q 018240 247 AALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV---ETNIVY-FEITEDSKLYAACLLKKLEEHGVLVM--- 319 (359)
Q Consensus 247 ~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~l~~~gi~~~--- 319 (359)
.+...++...+ ..++.+++++++.+.|+++|++.+..++. ..+.++ +.+....+.+.+++.+.|.++||.+.
T Consensus 249 ~g~~qL~~l~~-~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~ 327 (380)
T TIGR03588 249 LGLSQLKKLDR-FVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHY 327 (380)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCC
Confidence 67777777544 88888999999999999987776432221 122222 33432123468899999999999773
Q ss_pred -cC----------C-----------CcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 320 -PE----------S-----------STRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 320 -~~----------~-----------~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
|. . ...+++++++.++++|++++++.|++++
T Consensus 328 ~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 328 IPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred cccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 11 0 1458999999999999999999998764
No 181
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=4.7e-27 Score=197.80 Aligned_cols=329 Identities=20% Similarity=0.282 Sum_probs=232.2
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCC---CccCCChHHHHHHHHHHHHhC-CCCeEEcCCchHHHHHHHHHhh
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDD---DVLMHDPTAFRLETEMAKVMG-KEAGLFVPSGTMGNLISVLVHC 74 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~-~~~~~~~~~gt~a~~~~l~~~~ 74 (359)
.++|||.++ +....||.+.+++.+....- +..-.++...++.+.+++..+ .+..++++||++|++.+++.+.
T Consensus 42 ~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAiKlAR 121 (404)
T COG4992 42 REYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNEPQAELAEKLVELSPFADRVFFCNSGAEANEAALKLAR 121 (404)
T ss_pred CEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccCChHHHHHHHHHHhhCccccEEEEcCCcHHHHHHHHHHHH
Confidence 468999886 44566699999998854331 112235778899999999997 7788999999999999999998
Q ss_pred hhcC----CeEEe-cCCCcceeeccccccccCCc------------cceeeecCCCCCCCHHHHHHHhcCCCCCccCCce
Q 018240 75 ETRG----SEVIL-GDNSHIHIYENGGISTIGGV------------HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTT 137 (359)
Q Consensus 75 ~~~g----~~vl~-~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 137 (359)
...+ .+|+. .+..|.-+.- + ....+- .+..+|.+ |++.++++++ ++|
T Consensus 122 k~~~~~~k~~Iia~~nsFHGRT~g--a-lS~t~~~ky~~~F~Pl~~g~~~vpfn-----Di~al~~ai~--------~~t 185 (404)
T COG4992 122 KYTGDPEKSKIIAFENSFHGRTLG--A-LSATGQPKYRKGFGPLLPGFRHVPFN-----DIEALEAAID--------EDT 185 (404)
T ss_pred HHcCCCCCcEEEEEcCCcCCccce--e-eeccCChhhccCCCCCCCCceecCCC-----CHHHHHHHhc--------cCe
Confidence 5332 25554 4444443332 1 222221 12223333 9999999999 799
Q ss_pred eEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCC--cee
Q 018240 138 RLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGA--PVG 214 (359)
Q Consensus 138 ~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~--~~g 214 (359)
.+|++++... -+|+. .+.+++++++++|++||+++|.||+|...... |..+.-...++..-++++.|.+|+ |.|
T Consensus 186 aAvivEPIQG-EgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRT--Gk~fA~e~~gV~PDI~tlaK~LgGG~Pig 262 (404)
T COG4992 186 AAVIVEPIQG-EGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRT--GKLFAYEHYGVEPDILTLAKALGGGFPIG 262 (404)
T ss_pred EEEEEecccC-CCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCcc--chHHHHHHhCCCCCEEEeeccccCCccce
Confidence 9999999999 45664 55699999999999999999999998554332 433322222333334466688855 455
Q ss_pred eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC-CCce-EecCCccceE
Q 018240 215 SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL-KGLR-VDVDAVETNI 291 (359)
Q Consensus 215 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~-~g~~-~~~~~~~~~~ 291 (359)
+++ .++.+.+.+. .-.+++|+..+++.++++..+++...+ ...++..+..+++.+.|+++ ..+. +..-+..+.+
T Consensus 263 A~l-a~~~~~~~~~--~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLm 339 (404)
T COG4992 263 AML-ATEEIASAFT--PGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLM 339 (404)
T ss_pred eeE-EchhhhhcCC--CCcccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeE
Confidence 544 4455554432 223456666678888888888865543 46667777788888888775 1111 2112456777
Q ss_pred EEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 292 VYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
+-+.+..+ ..+.++.+.|.++|+.+.+.+.+.+|+.++..++++++++++++|+++++....
T Consensus 340 iGiel~~~--~~a~~~~~~~~~~gvL~~~a~~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 340 IGIELKEP--YRARDIVRALREEGVLVLPAGPNVIRFLPPLVITEEEIDEALDALERALAAASA 401 (404)
T ss_pred EEEEecCc--ccHHHHHHHHHHCCeEEecCCCCeEEecCCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 77888763 247899999999999999999999999999999999999999999999987754
No 182
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.96 E-value=4.5e-27 Score=207.99 Aligned_cols=284 Identities=20% Similarity=0.218 Sum_probs=209.5
Q ss_pred CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCC
Q 018240 36 HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDG 114 (359)
Q Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 114 (359)
.+|...++|+.++++.|.+.+++++||+.|+..++.+++ ++||+|+++...|.+.+... ..+...|++++.++..
T Consensus 68 ~~p~~~~le~~lA~l~g~~~al~~~sG~~Ai~~~l~all-~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~--- 143 (403)
T PRK07810 68 GNPTVSMFEERLRLIEGAEACFATASGMSAVFTALGALL-GAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGE--- 143 (403)
T ss_pred CCchHHHHHHHHHHHhCCCcEEEECChHHHHHHHHHHHh-CCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCC---
Confidence 467789999999999999999999999999999998887 59999999987765554310 2245678888888654
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh
Q 018240 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
|++++++.++ +++++|+++++.| |+|.+.+ +++|.++|+++|+++|+|++|+.+... . ++
T Consensus 144 --d~~~l~~ai~--------~~tklV~~esp~N-ptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~---~---~~ 203 (403)
T PRK07810 144 --DLSQWEEALS--------VPTQAVFFETPSN-PMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQ---R---GL 203 (403)
T ss_pred --CHHHHHHhcC--------cCceEEEEECCCC-CCCeecC---HHHHHHHHHHcCCEEEEECCCCccccC---C---hh
Confidence 8999999998 7899999977665 9999887 899999999999999999997543321 1 22
Q ss_pred hcCccEEEEeccccCCCce---eeEEecCHHHHH-HHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHH
Q 018240 195 VQAADSASVCLSKGLGAPV---GSVIVGSKEFIK-KARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLL 270 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~~---gg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 270 (359)
..++|+++.|++|++++.. ||+++++++.+. .++.+....+... ++..++.++.+++.... ++++..+++.++
T Consensus 204 ~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~--s~~~a~l~l~~L~tl~~-R~~~~~~~a~~~ 280 (403)
T PRK07810 204 PLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAL--SAFNAWVLLKGLETLAL-RVRHSNASALRI 280 (403)
T ss_pred hcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCC--CHHHHHHHHhccCcHHH-HHHHHHHHHHHH
Confidence 3378999999999997643 688888777554 4554545555544 67778888888887666 889999999999
Q ss_pred HHHHhcCCCce-EecC-----C----------ccceEEEEEeccc---hHHHHHHHHHHHHhcCc----------eeccC
Q 018240 271 AEGLNQLKGLR-VDVD-----A----------VETNIVYFEITED---SKLYAACLLKKLEEHGV----------LVMPE 321 (359)
Q Consensus 271 ~~~l~~~~g~~-~~~~-----~----------~~~~~~~~~~~~~---~~~~~~~~~~~l~~~gi----------~~~~~ 321 (359)
.+.|++.|.+. +..| + ..+..+.|.+... ......+|++.|+--.+ ...|.
T Consensus 281 a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~ 360 (403)
T PRK07810 281 AEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFEVLDKLRVIDISNNLGDAKSLITHPA 360 (403)
T ss_pred HHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHHHHHhCCceEEeccCCCCcceeeCCC
Confidence 99999988775 3322 1 3466788888641 12345566665532221 11121
Q ss_pred -----------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 322 -----------------SSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 322 -----------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
+.+.+|+++. + |+++.+++.|.+++
T Consensus 361 ~~~h~~~~~~~~~~~gi~~~lvR~svG--l--E~~~dli~dl~~Al 402 (403)
T PRK07810 361 TTTHRAMGPEGRAAIGLGDGVVRLSVG--L--EDTDDLIADLDRAL 402 (403)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEec--c--CCHHHHHHHHHHhh
Confidence 2346999985 3 57888888887765
No 183
>PRK14012 cysteine desulfurase; Provisional
Probab=99.96 E-value=1.2e-27 Score=213.96 Aligned_cols=327 Identities=15% Similarity=0.222 Sum_probs=217.9
Q ss_pred cccccCCCCCChHHHHHHHHHcCCC--C---CCc---c----CCChHHHHHHHHHHHHhCCCC--eEEcCCchHHHHHHH
Q 018240 5 TVDLRSDTVTKPTEAMRAAMASAEV--D---DDV---L----MHDPTAFRLETEMAKVMGKEA--GLFVPSGTMGNLISV 70 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~--~---~~~---~----~~~~~~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l 70 (359)
.+.|.+...+.+++.+.+++.+... . ... + ...+...++|+.+++++|.+. .++++|||+++..++
T Consensus 4 ~iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l 83 (404)
T PRK14012 4 PIYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAI 83 (404)
T ss_pred eEEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHH
Confidence 4788888887777888888866432 1 110 0 012456788999999999875 578888889988888
Q ss_pred HHhh---hhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEecccc
Q 018240 71 LVHC---ETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHA 147 (359)
Q Consensus 71 ~~~~---~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~ 147 (359)
.++. .++|++|++++++|.+........+..|++++.++.+.++.+|+++|++.++ +++++|++++++
T Consensus 84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~--------~~t~lv~~~~~~- 154 (404)
T PRK14012 84 KGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMR--------DDTILVSIMHVN- 154 (404)
T ss_pred HHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcC--------CCCEEEEEECcC-
Confidence 7764 2589999999999977654111123468899999888888899999999998 678899886655
Q ss_pred CCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHH
Q 018240 148 NCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKK 226 (359)
Q Consensus 148 ~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~ 226 (359)
||||.+.| +++|.++|+++|+++|+|++|+.+.... .... .++|++++|++|.+| |.| |+++.+++....
T Consensus 155 n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~g~~~~---~~~~--~~~D~~~~s~~K~~g-p~g~G~l~~~~~~~~~ 225 (404)
T PRK14012 155 NEIGVIQD---IAAIGEICRERGIIFHVDAAQSVGKVPI---DLSK--LKVDLMSFSAHKIYG-PKGIGALYVRRKPRVR 225 (404)
T ss_pred CCccchhh---HHHHHHHHHHcCCEEEEEcchhcCCccc---Cccc--CCCCEEEEehhhccC-CCceEEEEEecCCCCC
Confidence 49999987 7999999999999999999987755431 1222 268999999999776 555 666655443222
Q ss_pred HHHHHH-------hhCCCcchhHHHHH-HHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCC-cc---ceEEEE
Q 018240 227 ARRLRK-------TLGGGMRQVGVLCA-AALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDA-VE---TNIVYF 294 (359)
Q Consensus 227 ~~~~~~-------~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~~---~~~~~~ 294 (359)
+..... ...++......... ++...++...+...++..++++++.+.|++++++.+..+. .. ...+++
T Consensus 226 ~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~ 305 (404)
T PRK14012 226 LEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSF 305 (404)
T ss_pred CCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEE
Confidence 211000 00111111111111 1121123333346667788899999999988888764221 11 223444
Q ss_pred EeccchHHHHHHHHHHHHhcCcee----ccC-----------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 295 EITEDSKLYAACLLKKLEEHGVLV----MPE-----------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 295 ~~~~~~~~~~~~~~~~l~~~gi~~----~~~-----------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.... .+++.+.|++.+|.. .+. ..+.+|+++++.++++|++++++.|+++++++
T Consensus 306 ~~~~-----~~~~~~~l~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 306 NYVE-----GESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKL 380 (404)
T ss_pred eCcC-----HHHHHHhCCCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 4432 245666665333322 111 23679999999999999999999999998876
Q ss_pred H
Q 018240 354 C 354 (359)
Q Consensus 354 ~ 354 (359)
+
T Consensus 381 ~ 381 (404)
T PRK14012 381 R 381 (404)
T ss_pred H
Confidence 4
No 184
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.96 E-value=5.7e-27 Score=208.45 Aligned_cols=328 Identities=17% Similarity=0.186 Sum_probs=222.3
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCc---cCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDV---LMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.++|||.++ +....+|++.+++.+....... ....+...++++.++++++.+.+.+++||++|+..+++.+..
T Consensus 35 ~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~Alk~ar~ 114 (397)
T TIGR03246 35 KEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDATFADKVFFCNSGAEANEAALKLARR 114 (397)
T ss_pred CEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHH
Confidence 467999884 4555569999998876543111 113566789999999999888889999999999999998843
Q ss_pred h-------cCCeEE-ecCCCcceeeccccccccCCc------------cceeeecCCCCCCCHHHHHHHhcCCCCCccCC
Q 018240 76 T-------RGSEVI-LGDNSHIHIYENGGISTIGGV------------HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYP 135 (359)
Q Consensus 76 ~-------~g~~vl-~~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~ 135 (359)
- ..++|+ +....|.++.. + ....+. .+..++.+ |++.+++.++ +
T Consensus 115 ~~~~~~~~~r~~ii~~~~~yHG~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~--------~ 178 (397)
T TIGR03246 115 YALDKHGADKSEIVAFKNSFHGRTLF-T--VSVGGQPKYSQGFAPLPGGIKHAPYN-----DLAAAKALIS--------D 178 (397)
T ss_pred HHHhcCCCCCCEEEEECCCcCCccHH-H--HHhcCCcccccCCCCCCCceEEeCCC-----CHHHHHHHhc--------c
Confidence 1 123455 45556665432 1 222221 12233333 8999999997 6
Q ss_pred ceeEEEEeccccCCCceec-ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh--HhhhcCccEEEEeccccCCCc
Q 018240 136 TTRLICLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV--RRLVQAADSASVCLSKGLGAP 212 (359)
Q Consensus 136 ~~~~v~i~~~~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~~d~~~~s~~K~~g~~ 212 (359)
++++|++++.++ ++|... +.+++++|+++|++||+++|+||+|. |. +..|... ..+...+|++ +++|.+++.
T Consensus 179 ~~aavi~Epi~~-~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~-Gr~G~~~a~~~~gv~pDi~--t~~K~lggG 253 (397)
T TIGR03246 179 KTCAVIVEPIQG-EGGVVPADPAFLKGLRELCDRHNALLIFDEVQT-GV-GRTGELYAYMHYGVTPDIL--TSAKALGGG 253 (397)
T ss_pred CeEEEEEecccC-CCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-cC-CccccchhhhhcCCCCCEE--EeehhhhCC
Confidence 799999987655 667654 77999999999999999999999983 22 2233221 1122245654 678988632
Q ss_pred ee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhcCC-CceEec-CCcc
Q 018240 213 VG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQLK-GLRVDV-DAVE 288 (359)
Q Consensus 213 ~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~~~-g~~~~~-~~~~ 288 (359)
.. |++++++++.+.+... ..+.++..++..++++..+++... ++..++..++.+++.+.|+++. .+.+.. .+..
T Consensus 254 ~pigav~~~~~i~~~~~~~--~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~ 331 (397)
T TIGR03246 254 FPIGAMLTTTEIAAHLKVG--THGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGK 331 (397)
T ss_pred cceeEEEEcHHHHHhccCC--CcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecC
Confidence 22 6677888888776422 223344445666777777775432 2366778888899999888761 111111 1234
Q ss_pred ceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 289 TNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+.++.+.+..........+.+.|.++|+.+.+.+...+|++++..++++++++++++|+++++++
T Consensus 332 G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 332 GLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIAGPNVVRFAPSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred ceEEEEEEcCchhhHHHHHHHHHHHCCeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 55555655431112567899999999999987777899999988999999999999999988764
No 185
>PLN02651 cysteine desulfurase
Probab=99.96 E-value=4.4e-28 Score=213.98 Aligned_cols=310 Identities=19% Similarity=0.188 Sum_probs=212.8
Q ss_pred ccccCCCCCChHHHHHHHHHcCCCCCCc------c--C--CChHHHHHHHHHHHHhCCCC--eEEcCCchHHHHHHHHHh
Q 018240 6 VDLRSDTVTKPTEAMRAAMASAEVDDDV------L--M--HDPTAFRLETEMAKVMGKEA--GLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 6 id~~~~~~~~~~~~~~~a~~~~~~~~~~------~--~--~~~~~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l~~~ 73 (359)
+.|++...+.+++.+.+++.+....... + + ..+...++++.+++++|.+. .++++|||+++..++..+
T Consensus 1 iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~ 80 (364)
T PLN02651 1 LYLDMQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGV 80 (364)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHH
Confidence 4566776777778888888764322110 0 1 12335788899999999864 367778888888877665
Q ss_pred h---hhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018240 74 C---ETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 74 ~---~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
. .++|++|+++...|.+...........|++++.++.+.++.+|++++++.++ +++++++++++++ +|
T Consensus 81 ~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~--------~~t~lv~v~~~~n-~t 151 (364)
T PLN02651 81 MHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIR--------PDTALVSVMAVNN-EI 151 (364)
T ss_pred HHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC--------CCcEEEEEECCCC-Cc
Confidence 3 2578999999999877543111133568888888877788899999999998 6789999866554 99
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHH
Q 018240 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARR 229 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~ 229 (359)
|...| +++|.++|+++|+++++|++|+.|... .....+ ++|++++|.||| ++|.| |+++.+++....+..
T Consensus 152 G~~~~---l~~I~~~~~~~g~~~~vD~a~~~g~~~---~~~~~~--~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~~l~p 222 (364)
T PLN02651 152 GVIQP---VEEIGELCREKKVLFHTDAAQAVGKIP---VDVDDL--GVDLMSISGHKI-YGPKGVGALYVRRRPRVRLEP 222 (364)
T ss_pred eeccc---HHHHHHHHHHcCCEEEEEcchhhCCcc---cCcccC--CCCEEEechhhh-CCCCceEEEEEcCCCCCCCCc
Confidence 99988 799999999999999999998776443 223333 789999999997 55777 888877655444322
Q ss_pred HHH-------hhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhc-CCCceEecCC--c--cceEEEE
Q 018240 230 LRK-------TLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQ-LKGLRVDVDA--V--ETNIVYF 294 (359)
Q Consensus 230 ~~~-------~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~--~--~~~~~~~ 294 (359)
... ...++..... ..+...++ ....+...++..+..+++.+.|++ +|++++..+. . ...++.+
T Consensus 223 ~~~g~~~~~~~~~GT~~~~~--~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~ 300 (364)
T PLN02651 223 LMSGGGQERGRRSGTENTPL--VVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNL 300 (364)
T ss_pred cccCCCccCCccCCCccHHH--HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEE
Confidence 111 1112221111 12222233 223344566777888999999986 6899886541 1 1346777
Q ss_pred EeccchHHHHHHHHHHHHhcCceeccCC-----------------------CcEEEEEeCCCCCHHHHH
Q 018240 295 EITEDSKLYAACLLKKLEEHGVLVMPES-----------------------STRVRIVVHHQISANDVH 340 (359)
Q Consensus 295 ~~~~~~~~~~~~~~~~l~~~gi~~~~~~-----------------------~~~lRi~~~~~~~~~~i~ 340 (359)
.++. .+.+++.++|.+ |.+..+. .+.+|+|+++.+|++|+|
T Consensus 301 ~~~~---~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 301 SFAY---VEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred EeCC---CCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 7764 477889999865 6663331 357999999999999975
No 186
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.96 E-value=1.4e-26 Score=193.45 Aligned_cols=315 Identities=16% Similarity=0.137 Sum_probs=226.2
Q ss_pred ccCCChHHHHHHHHHHHHhC-CC--------CeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCc
Q 018240 33 VLMHDPTAFRLETEMAKVMG-KE--------AGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGV 103 (359)
Q Consensus 33 ~~~~~~~~~~l~~~la~~~~-~~--------~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~ 103 (359)
.|+.+.+..++...+.++.+ .- +.+++++.|.+++.++..++ ++||.|++..++|.+... . .+..|+
T Consensus 95 QYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~-N~gd~vlie~~ty~~AL~-s--~~a~gv 170 (472)
T KOG0634|consen 95 QYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLI-NRGDHVLIEEYTYPSALQ-S--MEALGV 170 (472)
T ss_pred ccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhh-cCCCceEEecccchHHHH-h--ccccCc
Confidence 47888889999999999766 11 12566666789999999999 599999999999888775 2 667788
Q ss_pred cceeeecCCCCCCCHHHHHHHhcCCCCC-ccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccc
Q 018240 104 HPRTVKNNQDGTMDIDLIEAAIRDPKGE-IVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFN 182 (359)
Q Consensus 104 ~~~~v~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~ 182 (359)
+++.|+.+++| ++++.|++.+++..-. -+.+++++++..++.+||||..++.+..++|.++|++|+++||+||.|.+.
T Consensus 171 ~~ipv~md~~G-i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~L 249 (472)
T KOG0634|consen 171 KIIPVKMDQDG-IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFL 249 (472)
T ss_pred eEEeccccCCC-CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCcccee
Confidence 99999887666 6999999999875322 223679999999999999999999999999999999999999999997554
Q ss_pred hhhh-cC--------ch---hH-----h-hhcCcc--EEEE-eccccCCCcee-eEEecCHHHHHHHHHHHHhhCCCcch
Q 018240 183 AAVA-LG--------VP---VR-----R-LVQAAD--SASV-CLSKGLGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQ 240 (359)
Q Consensus 183 ~~~~-~~--------~~---~~-----~-~~~~~d--~~~~-s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (359)
.+.. .+ .+ +. . +..+.| ++.. |+||.++.+.. ||+.+++.+++++-..........+.
T Consensus 250 q~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~ae~~t~~pSg 329 (472)
T KOG0634|consen 250 QMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLAEVATSGPSG 329 (472)
T ss_pred eccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHHHhhhcceeecCccc
Confidence 4331 01 00 00 0 011222 7777 99999985555 99999998888876554433322221
Q ss_pred h--HHHHHHH----HHHHHHhHHHHhhhHHHHHHHHHHHHhc-CCCc-eEecCCccceEEEEEec-------cchHHH-H
Q 018240 241 V--GVLCAAA----LVALQENVLVMLDGDHKKAKLLAEGLNQ-LKGL-RVDVDAVETNIVYFEIT-------EDSKLY-A 304 (359)
Q Consensus 241 ~--~~~~~~~----~~~l~~~~~~~~~~~~~~~~~l~~~l~~-~~g~-~~~~~~~~~~~~~~~~~-------~~~~~~-~ 304 (359)
. .+.-+.. ..++.+++.+.+..+..++..+..+|.+ +|.. ....+|.+|.|+|++++ .. .+ .
T Consensus 330 ~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~--i~q~ 407 (472)
T KOG0634|consen 330 FSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKS--INQI 407 (472)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccc--hHHH
Confidence 1 1111111 1122245555666777888888888877 4544 23356789999999996 21 23 3
Q ss_pred H-HHHHHHHhcCceeccCC-----------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 305 A-CLLKKLEEHGVLVMPES-----------STRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 305 ~-~~~~~l~~~gi~~~~~~-----------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
+ .+...+.++||.+++|. .-++|++++ ..+.+++++.++++..++++...
T Consensus 408 ~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a-~a~~e~l~~g~~rf~~~ike~f~ 469 (472)
T KOG0634|consen 408 EEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIA-FAEPEKLDEGIERFGSVIKEHFI 469 (472)
T ss_pred HHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEee-cCCHHHHHHHHHHHHHHHHHHhh
Confidence 3 44445589999996662 227999998 57788999999999999988654
No 187
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.96 E-value=6.2e-27 Score=208.04 Aligned_cols=289 Identities=20% Similarity=0.231 Sum_probs=205.3
Q ss_pred hHHHHHHHHHHHHhCCCC--eEEcCCchHHHHHHHHHhhh-----hcCCeEEecCCCcceeeccccccccCCccceeeec
Q 018240 38 PTAFRLETEMAKVMGKEA--GLFVPSGTMGNLISVLVHCE-----TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN 110 (359)
Q Consensus 38 ~~~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l~~~~~-----~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 110 (359)
+...++++.+++++|.+. .+++++|++++..++.++.. .+|++|++++++|++... .++..|++++.++.
T Consensus 59 ~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~---~~~~~G~~~~~v~~ 135 (373)
T TIGR03812 59 KIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEK---AAEMLGLELRYAPL 135 (373)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHH---HHHHcCCeEEEEee
Confidence 445889999999999874 37888899998888766542 356899999999988544 36778999999988
Q ss_pred CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcC--
Q 018240 111 NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALG-- 188 (359)
Q Consensus 111 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~-- 188 (359)
+.++.+|++++++.++ +++..+++.+ ++||||...+ +++|.++|+++|+++|+|++|+.+......
T Consensus 136 ~~~~~~d~~~l~~~l~--------~~~~~vv~~~-~~~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~ 203 (373)
T TIGR03812 136 DEDYTVDVKDVEDLID--------DNTIGIVGIA-GTTELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIPFLKKG 203 (373)
T ss_pred CCCCCcCHHHHHHHHh--------hCcEEEEEEC-CCCCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcC
Confidence 8888899999999998 4554444334 4679999876 899999999999999999998654432110
Q ss_pred chh--Hhh-hcCccEEEEeccccCCCc--eeeEEecCHHHHHHHHHHHHhhCCCc------chhHHHHHHHHHHHH----
Q 018240 189 VPV--RRL-VQAADSASVCLSKGLGAP--VGSVIVGSKEFIKKARRLRKTLGGGM------RQVGVLCAAALVALQ---- 253 (359)
Q Consensus 189 ~~~--~~~-~~~~d~~~~s~~K~~g~~--~gg~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~---- 253 (359)
... ..+ ..+.|.+++|.||++.+| .|++++.++++.+.++....+..... ..+....+++..+++
T Consensus 204 ~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~ 283 (373)
T TIGR03812 204 YNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGR 283 (373)
T ss_pred CCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCH
Confidence 000 111 126788889999975444 44667678888776542212111110 111222333334443
Q ss_pred HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccC-CCcEEEEEeCC
Q 018240 254 ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE-SSTRVRIVVHH 332 (359)
Q Consensus 254 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~-~~~~lRi~~~~ 332 (359)
...++..++..+++++|++.|+++ ++....+ ...+++.+.++. ..++.++|.++||.+... .+.++|++++.
T Consensus 284 ~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~v~~~~~~-----~~~v~~~L~~~gi~v~~~~~~~~iRis~~~ 356 (373)
T TIGR03812 284 EGYRKIVAECMENTRYLVEELKKI-GFEPVIE-PVLNIVAFEVDD-----PEEVRKKLRDRGWYVSVTRCPKALRIVVMP 356 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcC-CCceEEEEEeCC-----HHHHHHHHHHCCceeccCCCCCEEEEEEEC
Confidence 334446778889999999999998 6654333 356777777653 347999999999998655 46789999988
Q ss_pred CCCHHHHHHHHHHHHH
Q 018240 333 QISANDVHYTLSCFQK 348 (359)
Q Consensus 333 ~~~~~~i~~~~~~l~~ 348 (359)
.++++|+++++++|++
T Consensus 357 ~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 357 HVTREHIEEFLEDLKE 372 (373)
T ss_pred CCCHHHHHHHHHHHhh
Confidence 8999999999999975
No 188
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.96 E-value=1.3e-27 Score=207.85 Aligned_cols=300 Identities=16% Similarity=0.090 Sum_probs=208.7
Q ss_pred cccccccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCC-CeEEcCCchHHHHHHHHHhhhhcCCeE
Q 018240 3 TRTVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKE-AGLFVPSGTMGNLISVLVHCETRGSEV 81 (359)
Q Consensus 3 ~~~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-~~~~~~~gt~a~~~~l~~~~~~~g~~v 81 (359)
+..++|..+.+..+.|.. + ........|.... ..++++.++++++.+ ..+++++|+++.+.++..++ .+| .|
T Consensus 17 ~~~~~~~~~~~~~~~~~~-~---~~~~~~~~y~~~~-~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~l-~~g-~v 89 (330)
T TIGR01140 17 EDWLDFSTGINPLGPPVP-P---IPASAWARYPDPE-YDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRLL-APG-RV 89 (330)
T ss_pred hheeEccccCCCCCCChh-h---cchHHHhhCCCcc-HHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh-CCC-eE
Confidence 456888887665554421 1 1111223354444 499999999999986 45777777776666666666 467 79
Q ss_pred EecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHH
Q 018240 82 ILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDS 161 (359)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~ 161 (359)
++++|+|.... ..+...|.+++.++ |++++++.++ ++++++++++ +||||.+++.+++++
T Consensus 90 l~~~p~y~~~~---~~~~~~g~~~~~~~-------d~~~l~~~~~---------~~~~v~i~~p-~NPtG~~~~~~~~~~ 149 (330)
T TIGR01140 90 LVLAPTYSEYA---RAWRAAGHEVVELP-------DLDRLPAALE---------ELDVLVLCNP-NNPTGRLIPPETLLA 149 (330)
T ss_pred EEeCCCcHHHH---HHHHHcCCEEEEeC-------CHHHHHhhcc---------cCCEEEEeCC-CCCCCCCCCHHHHHH
Confidence 99999976644 34778888888875 7888888775 2457777565 669999999999999
Q ss_pred HHHHHHHcCcEEEEecccccchhhhcCchhHhhh--cCccEEEEeccccCCCcee--eEEecCHHHHHHHHHHHHhhCCC
Q 018240 162 VGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV--QAADSASVCLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGGG 237 (359)
Q Consensus 162 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d~~~~s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~~ 237 (359)
|+++|+++|++||+|++|..... ..+...+. ...+++..|+||+||.|+- ||+++++++++.+......+
T Consensus 150 l~~~a~~~~~~ii~De~y~~~~~---~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~--- 223 (330)
T TIGR01140 150 LAARLRARGGWLVVDEAFIDFTP---DASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREALGPW--- 223 (330)
T ss_pred HHHHhHhcCCEEEEECcccccCC---ccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhcCCCC---
Confidence 99999999999999999743321 12222221 1233555699999996532 88999999888876554322
Q ss_pred cchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcC
Q 018240 238 MRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHG 315 (359)
Q Consensus 238 ~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 315 (359)
..+...+.++...++ .+.++.++++.++++.+.+.|++++.+++. +..++++|+.++. ..++.++|.++|
T Consensus 224 -~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~f~~~~~~~-----~~~l~~~l~~~g 295 (330)
T TIGR01140 224 -TVNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLEVV--GGTALFLLVRTPD-----AAALHEALARRG 295 (330)
T ss_pred -CchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceEC--CCCCeEEEEEcCC-----HHHHHHHHHHCC
Confidence 223344444444443 334446677888999999999998556653 3477889988764 358999998899
Q ss_pred ceeccCC------CcEEEEEeCCCCCHHHHHHHHHHH
Q 018240 316 VLVMPES------STRVRIVVHHQISANDVHYTLSCF 346 (359)
Q Consensus 316 i~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l 346 (359)
|.+.|+. .+++|++++ ...++ +.++++|
T Consensus 296 i~v~pg~~f~~~~~~~iRi~~~--~~~~~-~~~~~~l 329 (330)
T TIGR01140 296 ILIRDFDNFPGLDPRYLRFALP--TDEEN-DRLEEAL 329 (330)
T ss_pred EEEEECCCCCCCCCCEEEEEec--CHHHH-HHHHHhh
Confidence 9997753 358999994 44455 7777765
No 189
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.96 E-value=8e-27 Score=202.79 Aligned_cols=336 Identities=19% Similarity=0.243 Sum_probs=241.3
Q ss_pred cccccCCCCCChH-HHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEe
Q 018240 5 TVDLRSDTVTKPT-EAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVIL 83 (359)
Q Consensus 5 ~id~~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~ 83 (359)
+|||.||+.+.+. +.+..++ ..++..|+.++...+||+.+++++|.++++.++|||.|+..+....+ ++||.|
T Consensus 47 ~IDLlSDS~T~aMs~~q~a~~---~vGDd~Yagd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v-~pGd~V-- 120 (460)
T PRK13237 47 YIDLLTDSGTNAMSDRQWAGM---MIGDEAYAGSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAI-KPGQYV-- 120 (460)
T ss_pred EEECcccCCchhccHHHHHHH---hhcchhhcCCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCC-CCcCEE--
Confidence 5999999999664 5655555 33788899999999999999999999999999999999998644444 689864
Q ss_pred cCCCcceeeccccccccCCccceeee----------cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee
Q 018240 84 GDNSHIHIYENGGISTIGGVHPRTVK----------NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC 153 (359)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~~v~----------~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~ 153 (359)
+..+|+.... +.....|+..+.+. .+.+|.+|++.|++.|+.. +.++++++.++.+.|..+|.+
T Consensus 121 p~n~~f~Tt~--ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~----~~~~~~lV~a~itvn~~GGqp 194 (460)
T PRK13237 121 PGNMYFTTTR--YHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEV----GAENIAYICLAVTVNLAGGQP 194 (460)
T ss_pred CCccchHhhH--HHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccc----cCCccCceEEEEecccCCCee
Confidence 6666666665 32455666444442 1346889999999999842 113555666666666556899
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccchhh--------hcCchhH----hhhcCccEEEEeccccCCCceeeEEec-C
Q 018240 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAV--------ALGVPVR----RLVQAADSASVCLSKGLGAPVGSVIVG-S 220 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~--------~~~~~~~----~~~~~~d~~~~s~~K~~g~~~gg~~~~-~ 220 (359)
+|.++++++.++|++||+.+|.|.|+.++... +.+.+.. ++...+|.+++|++|.++.+.||+++. +
T Consensus 195 vs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~GG~i~t~D 274 (460)
T PRK13237 195 VSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIGGFLAMND 274 (460)
T ss_pred CCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCceEEEECC
Confidence 99999999999999999999999999887442 3444443 334578999999999999988765555 7
Q ss_pred HHHHHHHHHHHHhh-CCCcc--hhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEe
Q 018240 221 KEFIKKARRLRKTL-GGGMR--QVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEI 296 (359)
Q Consensus 221 ~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~ 296 (359)
+++.++++.+...+ |..+. +++--..+...++.+..+ ........+.++|.+.|.+. |+.+.. |.++..+++..
T Consensus 275 ~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~~y~~~ri~~~~~l~~~L~~~-Gvpv~~-p~ggH~v~vda 352 (460)
T PRK13237 275 EELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQYEYIEHRVGQVRYLGEKLLAA-GVPIVE-PVGGHAVFLDA 352 (460)
T ss_pred HHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhchHHHHHHHHHHHHHHHHHHHHC-CCceec-CCCceEEEEEh
Confidence 88999988775543 32221 122233333334443332 46677778899999999999 999865 45666676653
Q ss_pred cc------chHHHHHHHHHHH-HhcCceeccC-----------C------CcEEEEEe-CCCCCHHHHHHHHHHHHHHHH
Q 018240 297 TE------DSKLYAACLLKKL-EEHGVLVMPE-----------S------STRVRIVV-HHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 297 ~~------~~~~~~~~~~~~l-~~~gi~~~~~-----------~------~~~lRi~~-~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.. .....+..+..+| .+.||..+.- + -..+|+.+ .-..|.+++|.+++++..+.+
T Consensus 353 ~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~ 432 (460)
T PRK13237 353 RRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYK 432 (460)
T ss_pred HHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHH
Confidence 21 1234677888888 8888876311 0 24589874 334688999999999998887
Q ss_pred HHH
Q 018240 352 GVC 354 (359)
Q Consensus 352 ~~~ 354 (359)
+-.
T Consensus 433 ~~~ 435 (460)
T PRK13237 433 HRE 435 (460)
T ss_pred hHh
Confidence 654
No 190
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=5.4e-27 Score=209.95 Aligned_cols=328 Identities=18% Similarity=0.195 Sum_probs=219.6
Q ss_pred cccccccCC---CCCCh-HHHHHHHHHcCCCCCC---ccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018240 3 TRTVDLRSD---TVTKP-TEAMRAAMASAEVDDD---VLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~---~~~~~-~~~~~~a~~~~~~~~~---~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.++|||.++ ++.++ +|.+.+++.+...... .....+...++.+.++++.+.+..++++||++|+..++..++.
T Consensus 39 ~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~gg~eA~~~al~~a~~ 118 (396)
T PRK02627 39 KEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYIEPQEELAEKLVELSGMDKVFFCNSGAEANEAAIKLARK 118 (396)
T ss_pred CEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhcCCCEEEECCCcHHHHHHHHHHHHH
Confidence 356899884 33455 4888888877543211 1123577788999999998888889999999999999998764
Q ss_pred hcC------CeEEecCCCcceeeccccccccCCcccee---eecCCCC----CCCHHHHHHHhcCCCCCccCCceeEEEE
Q 018240 76 TRG------SEVILGDNSHIHIYENGGISTIGGVHPRT---VKNNQDG----TMDIDLIEAAIRDPKGEIVYPTTRLICL 142 (359)
Q Consensus 76 ~~g------~~vl~~~~~~~~~~~~~~~~~~~g~~~~~---v~~~~~~----~~~~~~l~~~l~~~~~~~~~~~~~~v~i 142 (359)
..+ ++|+...++|..... . .....+..... .+...+. ..|++++++.+. +++++|++
T Consensus 119 ~~~~~~~~~~~ii~~~~~yhg~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~--------~~~~~vii 188 (396)
T PRK02627 119 YGHKKGIEKPEIITAENSFHGRTL-A-TLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAIT--------DKTAAVML 188 (396)
T ss_pred HhcccCCCCCeEEEECCCcCcccH-H-HHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcC--------CCeEEEEE
Confidence 111 568877777544322 1 12222211110 0111110 118899999987 68999999
Q ss_pred eccccCCCc-eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc--hhHhhhcCccEEEEeccccCCCcee-eEEe
Q 018240 143 ENTHANCGG-RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV--PVRRLVQAADSASVCLSKGLGAPVG-SVIV 218 (359)
Q Consensus 143 ~~~~~~ptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~ 218 (359)
+++ +||+| .+++.+++++|.++|++||+++|+||+|.. +...+. .........|+ .++||.++.+.. |+++
T Consensus 189 ~p~-~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g--~g~~g~~~~~~~~~~~pdi--~t~sK~~~~G~rig~~~ 263 (396)
T PRK02627 189 EPI-QGEGGVNPADKEYLQALRELCDENGILLILDEVQTG--MGRTGKLFAYQHYGIEPDI--MTLAKGLGGGVPIGAVL 263 (396)
T ss_pred ecc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcC--CCccCceeeehhcCCCCCE--EEEcchhhCCcccEEEE
Confidence 877 55888 678899999999999999999999999752 222221 11122223454 467899984333 7788
Q ss_pred cCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC----CCceEecCCccceEEE
Q 018240 219 GSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL----KGLRVDVDAVETNIVY 293 (359)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~----~g~~~~~~~~~~~~~~ 293 (359)
+++++++.+... ....++..++..++++..+++...+ +..++..++.+++++.|.++ |.+.. .+..+.++|
T Consensus 264 ~~~~~~~~~~~~--~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~g~~~~ 339 (396)
T PRK02627 264 AKEKVADVFTPG--DHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKE--VRGLGLMIG 339 (396)
T ss_pred EcHHHHhccCCC--CCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCeee--eccCcEEEE
Confidence 888888776432 2233444566677777777754322 24455555666666655543 22222 134677888
Q ss_pred EEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 294 FEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 294 ~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+.+.. +..++.+.|.++||.+.+++..++|++++..++++++++++++|+++++++
T Consensus 340 i~~~~----~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 340 IELDR----PAAEIVKKALEKGLLINVTGDNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred EEecC----cHHHHHHHHHHCCeEEeecCCCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 88843 567899999888999998887889999888899999999999999988764
No 191
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.96 E-value=3.9e-27 Score=206.44 Aligned_cols=287 Identities=16% Similarity=0.140 Sum_probs=213.6
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.|....|++.++++.|.+.+++++||++|+..++.+++ ++||+|+++.+.|.+.+... ......|+++..++.
T Consensus 52 npt~~~Le~~lA~leg~e~ivvt~gg~~Ai~~~l~all-~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~----- 125 (388)
T PRK08861 52 NPNRGLLEQTLSELESGKGAVVTNCGTSALNLWVSALL-GPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ----- 125 (388)
T ss_pred CchHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHc-CCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC-----
Confidence 67889999999999999888999999999999998887 59999999999987655311 112345667777753
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
.|++++++.++ +++++|+++++ +||||.+++ +++|.++|+++|+++|+|++|..+... .++.
T Consensus 126 ~d~e~l~~~i~--------~~tklV~lesP-~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~------~pl~ 187 (388)
T PRK08861 126 SDAAALDAALA--------KKPKLILLETP-SNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQ------KPLE 187 (388)
T ss_pred CCHHHHHHhcC--------cCCeEEEEECC-CCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccC------CCcc
Confidence 38899999988 78999999765 559999998 789999999999999999997543221 1223
Q ss_pred cCccEEEEeccccCCCce---eeEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHH
Q 018240 196 QAADSASVCLSKGLGAPV---GSVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLA 271 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~~---gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 271 (359)
.++|+++.|+||+++++. ||++++ ++++.+.++..+...|... ++..++..+.+++...- ++++..+++..+.
T Consensus 188 ~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~--~p~~a~l~~rgl~Tl~l-R~~~~~~~a~~~a 264 (388)
T PRK08861 188 LGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATG--TPFDSYMTLRGIRTLGA-RMRVHEESAQQIL 264 (388)
T ss_pred cCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCC--ChHHHHHHHhcCCCHHH-HHHHHHHHHHHHH
Confidence 379999999999998763 577766 5677777777777777665 56667777777776555 8889999999999
Q ss_pred HHHhcCCCce-EecCC---------------ccceEEEEEeccchHHHHHHHHHHHHhcCceec----------cC----
Q 018240 272 EGLNQLKGLR-VDVDA---------------VETNIVYFEITEDSKLYAACLLKKLEEHGVLVM----------PE---- 321 (359)
Q Consensus 272 ~~l~~~~g~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----------~~---- 321 (359)
+.|++.|.+. +..|. ..+..+.|.+.. .......|.+.|+--.+.+. |.
T Consensus 265 ~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~-~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h 343 (388)
T PRK08861 265 AYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAG-SFEQLKVFVKALALFSLAESLGGVESLICHPASMTH 343 (388)
T ss_pred HHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCC-CHHHHHHHHhcCCcceEccCCCCCcceeeCCCcccc
Confidence 9999987664 33331 346678888864 22345667776643222221 11
Q ss_pred -------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 322 -------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 322 -------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
..+.||+++. + |+++.+++.|+++++++.+
T Consensus 344 ~~~~~~~~~~~gi~~~liRlsvG--l--E~~~dli~Dl~~al~~~~~ 386 (388)
T PRK08861 344 RAMGEEALAEAGVSQQLLRLSVG--L--EDAQDLIADLDQAFAKAAE 386 (388)
T ss_pred cccCHHHHHhcCCCCCeEEEEeC--c--CCHHHHHHHHHHHHHHHHh
Confidence 2346999985 3 5788888888888887754
No 192
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.96 E-value=4.9e-27 Score=206.25 Aligned_cols=307 Identities=19% Similarity=0.231 Sum_probs=220.6
Q ss_pred HHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeecccccc
Q 018240 19 AMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGIS 98 (359)
Q Consensus 19 ~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~ 98 (359)
+.++++.+.......++.++...++++.++++++.+..++++||++|+..++.++..++||+|++++++|.+... .+
T Consensus 12 ~e~~a~~~~~~~~~~~~~g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~---~~ 88 (376)
T TIGR02379 12 QELEYIAEAISEGKLSGDGPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTAN---AF 88 (376)
T ss_pred HHHHHHHHHHHcCCccCCcHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHH---HH
Confidence 335555554434444555788899999999999999999999999999988888744699999999999887654 25
Q ss_pred ccCCccceeeecCCC-CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018240 99 TIGGVHPRTVKNNQD-GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 99 ~~~g~~~~~v~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
...|++++.++.+.+ +.+|++++++.++ +++++|+.. +|+|...+ +++|.++|++||++||+|+
T Consensus 89 ~~~G~~~v~vd~d~~~~~~d~~~le~~i~--------~~tk~Iip~----~~~G~~~d---~~~I~~la~~~~i~vIeDa 153 (376)
T TIGR02379 89 VLRGAKIVFVDIRPDTMNIDETLIESAIT--------HRTKAIVPV----HYAGVACD---MDTIMALANKHQLFVIEDA 153 (376)
T ss_pred HHcCCEEEEEecCCCcCCCCHHHHHHhcC--------cCceEEEEe----CCCCCccC---HHHHHHHHHHCCCEEEEEC
Confidence 667999999987755 6789999999998 678888642 37788876 7899999999999999999
Q ss_pred ccccchhhhcCchhHhhhcCccEEEEe--ccccCCC-ceeeEE-ecCHHHHHHHHHHHHh-------------------h
Q 018240 178 ARIFNAAVALGVPVRRLVQAADSASVC--LSKGLGA-PVGSVI-VGSKEFIKKARRLRKT-------------------L 234 (359)
Q Consensus 178 a~~~~~~~~~~~~~~~~~~~~d~~~~s--~~K~~g~-~~gg~~-~~~~~~~~~~~~~~~~-------------------~ 234 (359)
+|+++.. +.+..... ..|+.++| .+|.+.. +.||++ +.++++.++++.++.. .
T Consensus 154 a~~~g~~-~~~~~~g~---~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 229 (376)
T TIGR02379 154 AQGVMST-YKGRALGS---IGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDI 229 (376)
T ss_pred ccccCCc-cCCcccCC---CCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeee
Confidence 9987654 23433222 23544554 4566643 245654 5568899988876642 2
Q ss_pred CCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCC--C-ceEec-CCc-c-c-eEEEEEeccchHHHHHHH
Q 018240 235 GGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLK--G-LRVDV-DAV-E-T-NIVYFEITEDSKLYAACL 307 (359)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~--g-~~~~~-~~~-~-~-~~~~~~~~~~~~~~~~~~ 307 (359)
|.++.+..+.++.+...++...+ ..++..++++++.+.|++++ + ..+.. ++. . . .++++.++. ..+.+++
T Consensus 230 g~n~~~~~~~Aa~g~~qL~~l~~-~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~r~~l 306 (376)
T TIGR02379 230 GSSYLPSELQAAYLWAQLEQADR-INQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKD--EDDRNEL 306 (376)
T ss_pred cccCCccHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECC--cCCHHHH
Confidence 44455666777777777777655 77778888888888887763 2 22211 111 1 1 123455543 1367899
Q ss_pred HHHHHhcCceeccC--------------------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 308 LKKLEEHGVLVMPE--------------------------SSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 308 ~~~l~~~gi~~~~~--------------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
.+.|.++||.+... ....+.+++++.+++++++++++.|++++
T Consensus 307 ~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 307 IKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred HHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 99999999987311 02358899999999999999999998764
No 193
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.96 E-value=8.6e-27 Score=205.92 Aligned_cols=305 Identities=18% Similarity=0.215 Sum_probs=222.2
Q ss_pred HHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeecccccccc
Q 018240 21 RAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTI 100 (359)
Q Consensus 21 ~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~ 100 (359)
.+++.+.......++..+....+++.+++++|.+++++++||++|+..++..+..++||+|+++.++|.+... .+..
T Consensus 14 ~~~~~~~l~~~~~~g~~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~---~~~~ 90 (375)
T PRK11706 14 LDYIQQAMSSGKLCGDGGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTAN---AFVL 90 (375)
T ss_pred HHHHHHHHHcCCccCCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHH---HHHH
Confidence 3444443333445566778899999999999999999999999999888877754699999999999888764 3677
Q ss_pred CCccceeeecCCC-CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEeccc
Q 018240 101 GGVHPRTVKNNQD-GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGAR 179 (359)
Q Consensus 101 ~g~~~~~v~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~ 179 (359)
.|++++.++.+.+ +.+|++++++.++ +++++|++.+ ++|...+ +++|.++|+++|++||+|++|
T Consensus 91 ~G~~~v~~d~d~~~~~~d~~~le~~i~--------~~tk~i~~~~----~~G~~~~---~~~i~~la~~~~i~vIeD~a~ 155 (375)
T PRK11706 91 RGAKIVFVDIRPDTMNIDETLIEAAIT--------PKTRAIVPVH----YAGVACE---MDTIMALAKKHNLFVVEDAAQ 155 (375)
T ss_pred cCCEEEEEecCCCcCCcCHHHHHHhcC--------CCCeEEEEeC----CCCCccC---HHHHHHHHHHcCCEEEEECcc
Confidence 8999999977655 5789999999998 6788888743 5787655 899999999999999999999
Q ss_pred ccchhhhcCchhHhhhcCccEEEEecc--ccCCCcee-eEEecCHHHHHHHHHHHHh-------------------hCCC
Q 018240 180 IFNAAVALGVPVRRLVQAADSASVCLS--KGLGAPVG-SVIVGSKEFIKKARRLRKT-------------------LGGG 237 (359)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~d~~~~s~~--K~~g~~~g-g~~~~~~~~~~~~~~~~~~-------------------~~~~ 237 (359)
+++... .+..... ..|+.++|++ |.++.+.| ++++.++++.++++.++.. .|.+
T Consensus 156 a~g~~~-~~~~~g~---~~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~ 231 (375)
T PRK11706 156 GVMSTY-KGRALGT---IGHIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSS 231 (375)
T ss_pred cccccc-CCeeeec---CcCEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccc
Confidence 887642 2332222 3466666665 99976555 5666678888887766532 2334
Q ss_pred cchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCC---ceEecCCcc----ceEEEEEeccchHHHHHHHHHH
Q 018240 238 MRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKG---LRVDVDAVE----TNIVYFEITEDSKLYAACLLKK 310 (359)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g---~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 310 (359)
..+....++.+...++...+ ..++..++.+++.+.|+++++ +.+...+.. ..++++.++. +.+.+++.+.
T Consensus 232 ~~~~~~~aa~~~~ql~~l~~-~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~r~~l~~~ 308 (375)
T PRK11706 232 YLPSELQAAYLWAQLEAADR-INQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRD--LEDRSALINF 308 (375)
T ss_pred cCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECC--cCCHHHHHHH
Confidence 44456667777777777544 777888889999999988752 332111111 2244555543 2478899999
Q ss_pred HHhcCceeccC--------------------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 311 LEEHGVLVMPE--------------------------SSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 311 l~~~gi~~~~~--------------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
|.++||.+... ....+.+++++.++++|++++++.|++++
T Consensus 309 L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 309 LKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred HHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 99999985211 11248888999999999999999998764
No 194
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.96 E-value=1.2e-26 Score=207.08 Aligned_cols=295 Identities=20% Similarity=0.221 Sum_probs=216.8
Q ss_pred CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhh--------hhcCCeEEecCCCcceeeccccccccCCcccee
Q 018240 36 HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHC--------ETRGSEVILGDNSHIHIYENGGISTIGGVHPRT 107 (359)
Q Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~--------~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~ 107 (359)
.++...++|+++++++|.+.+++++||++|+..++.+++ .++||+|+++.++|..... .+...|++++.
T Consensus 61 ~G~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~---~v~~~G~~pv~ 137 (438)
T PRK15407 61 TGRFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVN---PIIQNGLVPVF 137 (438)
T ss_pred CChhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHH---HHHHcCCEEEE
Confidence 356789999999999999999999999999999998772 3689999999999877654 25667889998
Q ss_pred eecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh
Q 018240 108 VKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA 186 (359)
Q Consensus 108 v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~ 186 (359)
++.+ .++.+|++.+++.++ +++++|+++|+. |... ++++|.++|+++|++||+|++|++|...
T Consensus 138 vdvd~~~~~id~~~le~~i~--------~~tkaVi~~~~~----G~p~---dl~~I~~la~~~gi~vIeDaa~a~G~~~- 201 (438)
T PRK15407 138 VDVELPTYNIDASLLEAAVS--------PKTKAIMIAHTL----GNPF---DLAAVKAFCDKHNLWLIEDNCDALGSTY- 201 (438)
T ss_pred EecCCCcCCcCHHHHHHHcC--------cCCeEEEEeCCC----CChh---hHHHHHHHHHHCCCEEEEECccchhhhc-
Confidence 8775 568899999999998 789999997754 4433 4899999999999999999999887764
Q ss_pred cCchhHhhhcCccEEEEeccccCCCceeeEEec-CHHHHHHHHHHHHh--------------------------------
Q 018240 187 LGVPVRRLVQAADSASVCLSKGLGAPVGSVIVG-SKEFIKKARRLRKT-------------------------------- 233 (359)
Q Consensus 187 ~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~-~~~~~~~~~~~~~~-------------------------------- 233 (359)
.+.....+. ++-++++..+|.+..+.||+++. ++++.+.++.++.+
T Consensus 202 ~g~~~G~~g-d~~~fSf~~~k~~~~geGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (438)
T PRK15407 202 DGRMTGTFG-DIATLSFYPAHHITMGEGGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHK 280 (438)
T ss_pred CCeeeeccC-ceEEEeCCCCCCccccCceEEEECCHHHHHHHHHHHHhCccccccccccccccccccccccccccccccc
Confidence 444433332 22244445557675545666665 66676665544331
Q ss_pred -----hCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCC-ceEecCCcc---ceE-EEEEeccchHHH
Q 018240 234 -----LGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKG-LRVDVDAVE---TNI-VYFEITEDSKLY 303 (359)
Q Consensus 234 -----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g-~~~~~~~~~---~~~-~~~~~~~~~~~~ 303 (359)
.|.++.++.+.++.++..|+...+ +.++.+++++++.+.|+++++ +.+...+.. ..+ +.+.+....+.+
T Consensus 281 ~~~~~~G~n~rmsel~AAig~~qL~~l~~-~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 359 (438)
T PRK15407 281 YTYSHLGYNLKITDMQAAIGLAQLEKLPG-FIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFT 359 (438)
T ss_pred ccccccccccCccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCC
Confidence 245566778888888999988766 888999999999999998865 322111112 112 223443322346
Q ss_pred HHHHHHHHHhcCceeccC----------------------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 304 AACLLKKLEEHGVLVMPE----------------------------SSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 304 ~~~~~~~l~~~gi~~~~~----------------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.+++.+.|.++||.+... ....+-+++++.++++++++++++|+++++
T Consensus 360 Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 360 RVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred HHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 789999999999965210 112377888888999999999999998875
No 195
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.96 E-value=1.5e-26 Score=204.21 Aligned_cols=325 Identities=17% Similarity=0.146 Sum_probs=209.4
Q ss_pred cccccccCCCCCChH------HHHHHHHHcCC-------CCCC----ccCCChHHHHHHHHHHHHhCCCCeEEcCCchHH
Q 018240 3 TRTVDLRSDTVTKPT------EAMRAAMASAE-------VDDD----VLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMG 65 (359)
Q Consensus 3 ~~~id~~~~~~~~~~------~~~~~a~~~~~-------~~~~----~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a 65 (359)
...+||.|++|..-. +++.+++.+.. .+.. .++..+...++|+.+++++|.+.++++++|+.+
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~~l~~~sG~~a 83 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEAFIVPSGYMA 83 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCeEEEECChHHH
Confidence 357899998776322 55555655531 1111 123456789999999999999988999999999
Q ss_pred HHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEecc
Q 018240 66 NLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENT 145 (359)
Q Consensus 66 ~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~ 145 (359)
+...+..+. ++++.|+++...|.+.+. +.....+ ..+.++. .|+++|++.++...... +.+.+|+++++
T Consensus 84 ~~~~~~~~~-~~~d~ii~d~~~H~sv~~--~~~~~~~-~~~~~~~-----~d~~~l~~~l~~~~~~~--~~~~~v~v~~v 152 (370)
T PRK05937 84 NLGLCAHLS-SVTDYVLWDEQVHISVVY--SLSVISG-WHQSFRH-----NDLDHLESLLESCRQRS--FGRIFIFVCSV 152 (370)
T ss_pred HHHHHHHhC-CCCCEEEEEhhhhHHHHH--HHHHcCC-ceEEecC-----CCHHHHHHHHHhhhccC--CCcEEEEEecC
Confidence 876555544 478888898999999887 2233333 3333443 38999999997421110 23556777665
Q ss_pred ccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH-hhh-cCccEEEEeccccCCCceeeEEecCHHH
Q 018240 146 HANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR-RLV-QAADSASVCLSKGLGAPVGSVIVGSKEF 223 (359)
Q Consensus 146 ~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~-~~~-~~~d~~~~s~~K~~g~~~gg~~~~~~~~ 223 (359)
++ ++|.+.| +++|.++|+++|+++++|++|+.|..+..+.... .+. .+.+++..|++|.+|. .|+.+++.++.
T Consensus 153 ~s-~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~-~G~~vl~~~~~ 227 (370)
T PRK05937 153 YS-FKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGS-MGAALLSSSEV 227 (370)
T ss_pred CC-CCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhc-CceEEEcCHHH
Confidence 54 9999988 8999999999999999999998876654443221 121 1223566799999985 55435555665
Q ss_pred HHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH---HHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccch
Q 018240 224 IKKARRLRKTLGGGMRQVGVLCAAALVALQENV---LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDS 300 (359)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 300 (359)
.+.+......+......++...++...+++... +..+++..++.+++.+.|... + .+....+.++.
T Consensus 228 ~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~-~--------~~~~~~i~~~~-- 296 (370)
T PRK05937 228 KQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSA-A--------PGCVQPIFLPG-- 296 (370)
T ss_pred HHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCC-C--------CCCEEEEEeCC--
Confidence 555442222121111123333333334443221 224455666666776666542 1 01122344444
Q ss_pred HHHHHHHHHHHHhcCceeccC---CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 301 KLYAACLLKKLEEHGVLVMPE---SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 301 ~~~~~~~~~~l~~~gi~~~~~---~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
.....+.+.|.++||.+... ....+|++++..++++|++++++.|+++++++.+
T Consensus 297 -~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~ 353 (370)
T PRK05937 297 -ISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQK 353 (370)
T ss_pred -hhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 25678888999999987421 2457999999999999999999999999987743
No 196
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.96 E-value=9.4e-27 Score=207.96 Aligned_cols=327 Identities=16% Similarity=0.162 Sum_probs=223.3
Q ss_pred cccccccCCCCCC----hHHHHHHHHHcCCCCCCc---cCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018240 3 TRTVDLRSDTVTK----PTEAMRAAMASAEVDDDV---LMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~~~~~----~~~~~~~a~~~~~~~~~~---~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.+++||.++.... .+|++.+++.+....... ....+...++++.++++++.+.+++++||++|+..++..++.
T Consensus 37 ~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~ai~~a~~ 116 (401)
T TIGR01885 37 KRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLFGYDKVLPMNTGAEAVETAIKLARK 116 (401)
T ss_pred CEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhcCCCEEEEeCccHHHHHHHHHHHHH
Confidence 3578999874333 358998888775432111 114577899999999999988889999999999999998753
Q ss_pred h--------c-CCeEEecCCCcc-eeeccccccccCC------------ccceeeecCCCCCCCHHHHHHHhcCCCCCcc
Q 018240 76 T--------R-GSEVILGDNSHI-HIYENGGISTIGG------------VHPRTVKNNQDGTMDIDLIEAAIRDPKGEIV 133 (359)
Q Consensus 76 ~--------~-g~~vl~~~~~~~-~~~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~ 133 (359)
. + .+.|+..+.+|. +++. + ....+ ..+..++.+ |+++|++.+++..
T Consensus 117 ~~~~~~~~~~~~~~i~~~~~~yhg~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~---- 184 (401)
T TIGR01885 117 WGYKVKGIPENQAIIVSAKGNFHGRTLG--A-ISMSTDPDSRTNFGPYVPGFKKIPYN-----NLEALEEALEDHG---- 184 (401)
T ss_pred HhhhhcCCCCCCCEEEEECCCcCcccHH--H-HhCcCCcccccccCCCCCCceEeCCC-----CHHHHHHHHHhcC----
Confidence 1 2 345666666644 3332 1 22221 112333433 7899999886421
Q ss_pred CCceeEEEEeccccCCCceecCh-hhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH-h-hhcCccEEEEeccccCC
Q 018240 134 YPTTRLICLENTHANCGGRCLSV-EYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR-R-LVQAADSASVCLSKGLG 210 (359)
Q Consensus 134 ~~~~~~v~i~~~~~~ptG~~~~~-~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~-~-~~~~~d~~~~s~~K~~g 210 (359)
+++.+|+++++.+ ++|...+. +++++|.++|++||+++|+||+|. | ++..+.... . ....+|+++ ++|.++
T Consensus 185 -~~~~avi~E~v~~-~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g-~g~~G~~~~~~~~~~~~di~~--~gK~l~ 258 (401)
T TIGR01885 185 -PNVCAFIVEPIQG-EAGVVVPDDGYLKKVRELCTKHNVLLIADEIQT-G-LGRTGKLLCVDHENVKPDIVL--LGKALS 258 (401)
T ss_pred -CCEEEEEEeCccC-CCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCccchhhHHhhcCCCCCEEE--eecccc
Confidence 4678899988777 78887764 579999999999999999999974 2 322333211 1 112467665 459987
Q ss_pred Ccee--eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcCCCceEec-CC
Q 018240 211 APVG--SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQLKGLRVDV-DA 286 (359)
Q Consensus 211 ~~~g--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~~g~~~~~-~~ 286 (359)
++.. |++++++++++.++.. ..+.++..++..++++..+++...+ ...++..++.+++++.|+++ +..+.. .+
T Consensus 259 ~g~~~ig~v~~~~~i~~~~~~~--~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~~L~~l-~~~~~~~~~ 335 (401)
T TIGR01885 259 GGVYPVSAVLADDDVMLTIKPG--EHGSTYGGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKL-PKPIITEVR 335 (401)
T ss_pred CCCCCcEEEEEcHHHHhhccCC--CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhc-cCCceeEEe
Confidence 5322 6678888888876431 2233444456667777777765443 34566777889999999987 323211 12
Q ss_pred ccceEEEEEeccc-hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 287 VETNIVYFEITED-SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 287 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
..+.+..+.++.+ .+.+..++.++|.++||.+.+.+...+|++++..++++++++++++|++++
T Consensus 336 g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~~~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 336 GRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKPTHGNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred ecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEecCCCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 3556655555442 123678899999999999988888899999998999999999999998876
No 197
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.5e-26 Score=196.85 Aligned_cols=319 Identities=20% Similarity=0.207 Sum_probs=238.8
Q ss_pred HHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC--e-EEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeec
Q 018240 17 TEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA--G-LFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYE 93 (359)
Q Consensus 17 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~--~-~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~ 93 (359)
+|+++++|.+...++..-.......++.+.+...|+.++ . ++.+|||.+++.++..++ +|||+|++.....++...
T Consensus 17 ~~~V~~am~~~~~~h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~-~pgdkVLv~~nG~FG~R~ 95 (383)
T COG0075 17 PPRVLLAMARPMVGHRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLV-EPGDKVLVVVNGKFGERF 95 (383)
T ss_pred CHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhcc-CCCCeEEEEeCChHHHHH
Confidence 499999999976665444445667888899999999873 3 667899999999999999 499998876665555443
Q ss_pred cccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEE
Q 018240 94 NGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKL 173 (359)
Q Consensus 94 ~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~l 173 (359)
+.++++.|++++.+..++.-.+|++++++.|++. ++.++|.+.| ..++||+..| +++|.++|++||.++
T Consensus 96 -~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~------~~~~~V~~vH-~ETSTGvlnp---l~~I~~~~k~~g~l~ 164 (383)
T COG0075 96 -AEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKD------PDIKAVAVVH-NETSTGVLNP---LKEIAKAAKEHGALL 164 (383)
T ss_pred -HHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcC------CCccEEEEEe-ccCcccccCc---HHHHHHHHHHcCCEE
Confidence 3678999999999988877889999999999953 6777888855 5569999887 899999999999999
Q ss_pred EEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHH------------HHhh---CCC
Q 018240 174 HIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRL------------RKTL---GGG 237 (359)
Q Consensus 174 i~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~------------~~~~---~~~ 237 (359)
|||.+.++|+.. ....++ +.|+++.+..|++++|.| +++..+++..+.+... ...+ +.+
T Consensus 165 iVDaVsS~Gg~~---~~vd~w--giDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~ 239 (383)
T COG0075 165 IVDAVSSLGGEP---LKVDEW--GIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGST 239 (383)
T ss_pred EEEecccCCCcc---cchhhc--CccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCC
Confidence 999987776553 334444 899999999999999999 8888887776664321 1112 222
Q ss_pred cchhHHHH-HHHHHHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecC-CccceEEE-EEeccchHHHHHHHHHH
Q 018240 238 MRQVGVLC-AAALVAL----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVD-AVETNIVY-FEITEDSKLYAACLLKK 310 (359)
Q Consensus 238 ~~~~~~~~-~~~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~ 310 (359)
...++... .+...++ +++++.+.+|++++++.+++.++++ |+++... ...++.+. +.++. +++..++...
T Consensus 240 p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~--g~~~~~~~~~ 316 (383)
T COG0075 240 PYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPE--GVDDKKVRRA 316 (383)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCC--CCCcHHHHHH
Confidence 22222222 2223333 4556778889999999999999999 9997652 23454444 44444 3455455555
Q ss_pred H-HhcCceeccC----CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 311 L-EEHGVLVMPE----SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 311 l-~~~gi~~~~~----~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
+ +++|+.+.++ ....+||......+.+++...+.+|..++.++..
T Consensus 317 ~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 317 LLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGV 366 (383)
T ss_pred HHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCC
Confidence 5 7779888554 4568999977789999999999999999988753
No 198
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=9e-27 Score=206.85 Aligned_cols=321 Identities=19% Similarity=0.203 Sum_probs=216.1
Q ss_pred cccccccCCC----CCChHHHHHHHHHcCCCCCCcc---CCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018240 3 TRTVDLRSDT----VTKPTEAMRAAMASAEVDDDVL---MHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~~----~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.+++||.++. ....+|.+.+++.+........ ...+...++.+.+++..+.+..++++||++|+..++..+..
T Consensus 29 ~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~a~~ 108 (377)
T PRK02936 29 KTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARK 108 (377)
T ss_pred CEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHHHHH
Confidence 3578998884 4555588888888765432111 12344455666666655556678999999999999997653
Q ss_pred hcC-CeEEecCCC-cceeeccccccccCCc------------cceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEE
Q 018240 76 TRG-SEVILGDNS-HIHIYENGGISTIGGV------------HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLIC 141 (359)
Q Consensus 76 ~~g-~~vl~~~~~-~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~ 141 (359)
.+| ++|+..+++ |.+.+. . ....+. .+..++.+ |++.+++.++ +++++|+
T Consensus 109 ~~g~~~vi~~~~~~Hg~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~--------~~~~~ii 172 (377)
T PRK02936 109 HTGKSKIVTFEQSFHGRTFG--T-MSATGQEKIKEGFGPLLPGFTHVPFN-----DIKALKEVMN--------EEVAAVM 172 (377)
T ss_pred hcCCCeEEEECCCcCCCcHH--h-hhccCCccccccCCCCCCCceEeCCC-----CHHHHHHhcc--------CCeEEEE
Confidence 344 457766554 444433 1 222221 11222222 7899999887 6789999
Q ss_pred EeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH--hhhcCccEEEEeccccCCCce-eeEE
Q 018240 142 LENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR--RLVQAADSASVCLSKGLGAPV-GSVI 217 (359)
Q Consensus 142 i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~~d~~~~s~~K~~g~~~-gg~~ 217 (359)
++++.+ ++|.. .+.+++++|+++|++||+++|+||+|.. +...+.... ......|+ .+++|.++... .|++
T Consensus 173 ~e~i~~-~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g--~g~~g~~~~~~~~~~~~di--~t~sK~l~~G~~ig~v 247 (377)
T PRK02936 173 LEVVQG-EGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTG--IGRTGTLFAYEQFGLDPDI--VTVAKGLGNGIPVGAM 247 (377)
T ss_pred EecccC-CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcCchhhHHHhhCCCCcE--EEEcccccCCCccEEE
Confidence 988866 77776 5679999999999999999999999742 233332211 12223454 46889997431 3778
Q ss_pred ecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhcC-CCceEec-CCccceEEEE
Q 018240 218 VGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQL-KGLRVDV-DAVETNIVYF 294 (359)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~~-~g~~~~~-~~~~~~~~~~ 294 (359)
++++++.+.+... ....++..+++.++++..+++... ++.+++..++.+++++.|++. +++.... ....+.++|+
T Consensus 248 ~~~~~~~~~~~~~--~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i 325 (377)
T PRK02936 248 IGKKELGTAFGPG--SHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGI 325 (377)
T ss_pred EEcHHHHhhccCC--CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEE
Confidence 8898888876432 223334456677777777776542 235667777788888877762 2222111 1235678889
Q ss_pred EeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 295 EITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 295 ~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
.+.. +...+.+.|.++||.+.+.+..++|++++..++++++++++++|++++
T Consensus 326 ~~~~----~~~~~~~~l~~~gv~v~~~g~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 326 ECTE----EVAPVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred Eecc----hHHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 8875 367888899999999999888899999888899999999999998763
No 199
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.96 E-value=1.2e-26 Score=204.93 Aligned_cols=283 Identities=23% Similarity=0.224 Sum_probs=208.6
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.|...++|+.+++++|.+.+++++||++|+..++.+++ ++||+|+++++.|.+.+... ......|++++.++.+
T Consensus 60 ~p~~~~le~~la~l~g~~~~v~~ssG~~Ai~~al~al~-~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~---- 134 (390)
T PRK08133 60 NPTVTMFQERLAALEGAEACVATASGMAAILAVVMALL-QAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT---- 134 (390)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCC----
Confidence 67789999999999999999999999999999998887 59999999999887765311 1244578888888765
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
|++++++.++ +++++|+++++ +||+|.+.+ +++|.++|+++|+++|+|+++..+.. .. ++.
T Consensus 135 -d~~~l~~~i~--------~~tklV~ie~p-~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~---~~---pl~ 195 (390)
T PRK08133 135 -DLDAWRAAVR--------PNTKLFFLETP-SNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPAL---QQ---PLK 195 (390)
T ss_pred -CHHHHHHhcC--------cCCeEEEEECC-CCCCCCcCC---HHHHHHHHHHcCCEEEEECCCccccc---CC---chh
Confidence 8899999998 78999999766 559999987 89999999999999999998643222 11 223
Q ss_pred cCccEEEEeccccCCCc---eeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHH
Q 018240 196 QAADSASVCLSKGLGAP---VGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAE 272 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 272 (359)
.++|+++.|+||+++++ .||+++++++.++++.......+... ++..++.++.+++.... ++++..+++..+.+
T Consensus 196 ~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~--~~~~a~~~l~gl~tl~~-R~~~~~~~a~~la~ 272 (390)
T PRK08133 196 LGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTL--SPFNAWVFLKGLETLSL-RMEAHSANALALAE 272 (390)
T ss_pred hCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCC--CHHHHHHHHcccchHHH-HHHHHHHHHHHHHH
Confidence 36899999999999764 46888888888777765555555544 44555555666664444 77888899999999
Q ss_pred HHhcCCCceE-ecCC---------------ccceEEEEEeccchHHHHHHHHHHHHhcCcee----------ccC-----
Q 018240 273 GLNQLKGLRV-DVDA---------------VETNIVYFEITEDSKLYAACLLKKLEEHGVLV----------MPE----- 321 (359)
Q Consensus 273 ~l~~~~g~~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~----------~~~----- 321 (359)
.|++.|+++. ..|. ..+.++.|.+.. .......|.+.|+--.+.+ .|.
T Consensus 273 ~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~-~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~~~ 351 (390)
T PRK08133 273 WLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKG-GREAAWRVIDATRLISITANLGDTKTTITHPATTTHG 351 (390)
T ss_pred HHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC-CHHHHHHHHHhCCcceEeccCCCcceeeecCCCCCcc
Confidence 9999877652 2221 346678888864 2234667777764322222 111
Q ss_pred ------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 322 ------------SSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 322 ------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
..+.+|+++. + |+.+.+++-|+++++
T Consensus 352 ~~~~~~~~~~gi~~~liR~svG--l--E~~~dl~~dl~~al~ 389 (390)
T PRK08133 352 RLSPEARAAAGITEGLIRVAVG--L--EDVADIKADLARGLA 389 (390)
T ss_pred cCCHHHHHhcCCCCCeEEEEeC--c--CCHHHHHHHHHHHhh
Confidence 2356999985 3 578888888887764
No 200
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.96 E-value=4.5e-27 Score=206.96 Aligned_cols=283 Identities=21% Similarity=0.174 Sum_probs=208.1
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTM 116 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 116 (359)
.|...++|+.+++++|.+.+++++||++|+..++.+++ ++||+|+++.+.|.+...........|+++..+. +
T Consensus 52 np~~~~lE~~lA~l~g~~~~l~~~sG~~Ai~~~l~~ll-~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~------~ 124 (385)
T PRK08574 52 NPTLRPLEEALAKLEGGVDALAFNSGMAAISTLFFSLL-KAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY------P 124 (385)
T ss_pred CccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHh-CCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC------C
Confidence 67889999999999999999999999999999999887 5999999999998876541111244566665543 3
Q ss_pred CHHHHHHHhcCCCCCccCC-ceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 117 DIDLIEAAIRDPKGEIVYP-TTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~-~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
|.+++++.++ + ++++|++++ ++||||.+++ +++|+++|+++|+++|+|++++.+... .++.
T Consensus 125 d~~~l~~~i~--------~~~tklV~ie~-p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~------~~l~ 186 (385)
T PRK08574 125 STEDIIEAIK--------EGRTKLVFIET-MTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLY------RPLR 186 (385)
T ss_pred CHHHHHHhcC--------ccCceEEEEEC-CCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC------Chhh
Confidence 7889999988 5 899999855 5559999988 789999999999999999997554321 1222
Q ss_pred cCccEEEEeccccCCCc---eee-EEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHH
Q 018240 196 QAADSASVCLSKGLGAP---VGS-VIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLA 271 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~---~gg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 271 (359)
.++|+++.|++|+++++ .|| +++.++++.++++.++...|... ++..++.+..+++.... ++++..+++..+.
T Consensus 187 ~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~--~p~~a~l~l~~l~tL~~-R~~~~~~na~~la 263 (385)
T PRK08574 187 HGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIM--QPFEAYLVLRGLKTLEV-RFERQCRNAMAIA 263 (385)
T ss_pred hCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCC--CHHHHHHHHcccCcHHH-HHHHHHHHHHHHH
Confidence 47899999999999865 356 56668888888887777666555 55666777777776555 8888889999999
Q ss_pred HHHhcCCCce-EecCC-----------------ccceEEEEEeccchHHHHHHHHHHHHhcCceeccC------------
Q 018240 272 EGLNQLKGLR-VDVDA-----------------VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE------------ 321 (359)
Q Consensus 272 ~~l~~~~g~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~------------ 321 (359)
+.|++.|.+. +..|. ..+..+.|.++. ......+|.+.|+--.+.+.-|
T Consensus 264 ~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~-~~~~~~~~~~~l~l~~~~~s~G~~~sl~~~~~~~ 342 (385)
T PRK08574 264 EFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKG-GRDAVLKFLRSLKLIKPSPSLGGVESLATYPVKS 342 (385)
T ss_pred HHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCC-CHHHHHHHHHcCCcceEccCCCCCcceeeCCCcC
Confidence 9999887664 33321 245677788864 2235667777774322222111
Q ss_pred ---------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 322 ---------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 322 ---------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
..+.+|+++. + |+.+.+++-|.+++++
T Consensus 343 ~~~~~~~~~~~~~gi~~~liR~svG--l--E~~~dli~dl~~al~~ 384 (385)
T PRK08574 343 AASPIPEEDRKALGITEDLVRLSVG--L--EDVEDLIEDLDQALGS 384 (385)
T ss_pred CcccCCHHHHHhcCCCCCeEEEEec--c--CCHHHHHHHHHHHHhc
Confidence 1356999985 3 5788888888887754
No 201
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.96 E-value=1.6e-26 Score=206.15 Aligned_cols=332 Identities=16% Similarity=0.137 Sum_probs=223.3
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCc---cCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDV---LMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.+++||.++ +....+|.+.+++.+....... ....+...++.+.++++++.+.+++++||++|+..+++.+..
T Consensus 39 ~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~e~Alk~ar~ 118 (406)
T PRK12381 39 KEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARK 118 (406)
T ss_pred CEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCccCCHHHHHHHHHHHhhCCCCeEEEcCCcHHHHHHHHHHHHH
Confidence 357899884 4555569999888876533111 112456788999999998877889999999999999999753
Q ss_pred h-------cCCeEEecCCCcceeeccccccccCCcc------------ceeeecCCCCCCCHHHHHHHhcCCCCCccCCc
Q 018240 76 T-------RGSEVILGDNSHIHIYENGGISTIGGVH------------PRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPT 136 (359)
Q Consensus 76 ~-------~g~~vl~~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 136 (359)
. ...+|+..+.+|..... + .....+.. +..++. .|++.+++.++ ++
T Consensus 119 ~~~~~~~~~r~~ii~~~~~yHG~t~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~--------~~ 183 (406)
T PRK12381 119 YAHDRYGSHKSGIVAFKNAFHGRTL-F-TVSAGGQPKYSQDFAPLPPDIRHAAY-----NDLNSASALID--------DQ 183 (406)
T ss_pred HHhhcCCCCCCeEEEECCCcCCcch-h-HHhhcCCcccccCCCCCCCCeeEeCC-----CCHHHHHHhcc--------CC
Confidence 2 23456655554433332 1 12222211 112222 28899999887 67
Q ss_pred eeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH--hhhcCccEEEEeccccCCCce
Q 018240 137 TRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR--RLVQAADSASVCLSKGLGAPV 213 (359)
Q Consensus 137 ~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~~d~~~~s~~K~~g~~~ 213 (359)
+++|++++... .+|+. .+.+++++|+++|++||+++|+||+|. |. ...+.... .....+|+ .+++|.+++..
T Consensus 184 ~aaviiEPv~~-~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~-gr~G~~~~~~~~~v~pDi--~t~sK~l~gG~ 258 (406)
T PRK12381 184 TCAVIVEPIQG-EGGVIPADKAFLQGLRELCDRHNALLIFDEVQT-GV-GRTGELYAYMHYGVTPDV--LTTAKALGGGF 258 (406)
T ss_pred eeEEEEeCCcC-CCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhh-CC-CCCcchhhhHhhCCCCCE--EEehhhhhCCC
Confidence 89999975443 23433 368999999999999999999999973 22 33333211 12224554 58889996432
Q ss_pred e-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC-CCceE-ecCCccc
Q 018240 214 G-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL-KGLRV-DVDAVET 289 (359)
Q Consensus 214 g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~-~g~~~-~~~~~~~ 289 (359)
. |++++++++.+.+... ..+.++..+++.++++..+++...+ +.+++..++.+++.+.|+++ ..+.+ ......+
T Consensus 259 ~ig~~~~~~~~~~~~~~~--~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G 336 (406)
T PRK12381 259 PIGAMLTTEKCASVMTVG--THGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLG 336 (406)
T ss_pred ceEEEEEcHHHHhhcCCC--CCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCe
Confidence 2 7788888888876432 2334444566666676666654322 35677788888898888875 11211 1113356
Q ss_pred eEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 018240 290 NIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCEE 356 (359)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 356 (359)
.++++.+..+.......+.+.|.++||.+.+.+...+|++++..++++++++++++|+++++++..+
T Consensus 337 l~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~~ 403 (406)
T PRK12381 337 LLIGCVLNAEYAGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNISEEEITTGLDRFARACERFVSR 403 (406)
T ss_pred EEEEEEecCchhhHHHHHHHHHHHCCcEEeeCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 6777777652112467888899999999987777899999988899999999999999999988654
No 202
>PRK05968 hypothetical protein; Provisional
Probab=99.96 E-value=1.3e-26 Score=204.64 Aligned_cols=283 Identities=20% Similarity=0.178 Sum_probs=210.5
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.|...++|+.+++++|.+.+++++||+.|+..++..++ ++||+|+++.+.|.+.+... ......|++++.++..
T Consensus 62 ~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~al~al~-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~---- 136 (389)
T PRK05968 62 NPTVRAFEEMLAKLEGAEDARGFASGMAAISSTVLSFV-EPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGR---- 136 (389)
T ss_pred ChhHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCC----
Confidence 56789999999999999999999999999998888877 59999999999987754201 2245678888888644
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
|++++++.+. ++++|++++ |+|...+..++++|.++|+++|+++|+|++++.+.. .. ++.
T Consensus 137 -d~~~l~~~i~---------~tklV~ie~----pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~---~~---p~~ 196 (389)
T PRK05968 137 -DEEAVAKALP---------GAKLLYLES----PTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVF---QR---PIT 196 (389)
T ss_pred -CHHHHHHhcc---------cCCEEEEEC----CCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhc---cC---chh
Confidence 8888888764 478999975 445555667899999999999999999999744322 11 122
Q ss_pred cCccEEEEeccccCCCc---eeeEEecCHHHHHHHHHHHH-hhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHH
Q 018240 196 QAADSASVCLSKGLGAP---VGSVIVGSKEFIKKARRLRK-TLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLA 271 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~---~gg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 271 (359)
.++|+++.|++|+++++ .||+++.+++++++++.... ..+..+ ++..++.+..+++.... ++++..+++..+.
T Consensus 197 ~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~--~~~~A~~~l~~L~tl~~-r~~~~~~~a~~la 273 (389)
T PRK05968 197 LGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKL--SPFEAWLLLRGLRTLPL-RMKAHEASALEIA 273 (389)
T ss_pred cCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCC--ChHHHHHHHcccCcHHH-HHHHHHHHHHHHH
Confidence 37899999999999875 35888899998888776543 344333 56777777778877655 8888899999999
Q ss_pred HHHhcCCCceEec-CC----------ccceEEEEEeccchHHHHHHHHHHHHhcCceeccC-------------------
Q 018240 272 EGLNQLKGLRVDV-DA----------VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE------------------- 321 (359)
Q Consensus 272 ~~l~~~~g~~~~~-~~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~------------------- 321 (359)
+.|++.|+++... +. ..+.++.|.+.. +.+..+|.+.|...++.+.-|
T Consensus 274 ~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~--~~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~~ 351 (389)
T PRK05968 274 RRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE--GIDVRAFADALKLFRLGVSWGGHESLVVPAEVVLQQKAQP 351 (389)
T ss_pred HHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC--HHHHHHHHHhCCccEEecCCCCCCceeeeCcccccccCCH
Confidence 9999998886433 31 235578888864 357789999997666544111
Q ss_pred --------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 322 --------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 322 --------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.++.+|+++.. |+.+.+++-|++++++.
T Consensus 352 ~~~~~~gi~~~liR~SvGl----E~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 352 NSAARFGVSPRSVRLHVGL----EGTEALWADLEQALAAA 387 (389)
T ss_pred HHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHHh
Confidence 13569999963 45666677776666654
No 203
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.96 E-value=1.9e-26 Score=205.93 Aligned_cols=327 Identities=19% Similarity=0.195 Sum_probs=222.8
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCc---cCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDV---LMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.++|||.++ +....+|++.+++.+....... ....+...++++.++++.+.+.+++++||++|+..++..+..
T Consensus 40 ~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~sGseA~e~a~klar~ 119 (403)
T PRK05093 40 KEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDATFAERVFFANSGAEANEAAFKLARR 119 (403)
T ss_pred CEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhCCCCEEEEeCchHHHHHHHHHHHHH
Confidence 357999885 5556569999888875532111 123455679999999988877889999999999999997743
Q ss_pred h-------cCCeEE-ecCCCcceeeccccccccC------------CccceeeecCCCCCCCHHHHHHHhcCCCCCccCC
Q 018240 76 T-------RGSEVI-LGDNSHIHIYENGGISTIG------------GVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYP 135 (359)
Q Consensus 76 ~-------~g~~vl-~~~~~~~~~~~~~~~~~~~------------g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~ 135 (359)
. ..++|+ +....|..+.. + .... ...++.++.+ |++.+++.+. +
T Consensus 120 ~~~~~~~~~~~~ii~~~~~~HG~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~--------~ 183 (403)
T PRK05093 120 YACDRHGPEKTEIIAFHNSFHGRTLF--T-VSVGGQPKYSDGFGPKPADITHVPFN-----DLAAVKAVID--------D 183 (403)
T ss_pred HHhhcCCCCCCeEEEEcCCcCCchhh--h-HhhcCChhhhhcCCCCCCCcEEeCCC-----CHHHHHHHhc--------C
Confidence 2 123454 55556665442 1 1111 1123334433 8899999887 6
Q ss_pred ceeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH--hhhcCccEEEEeccccCCCc
Q 018240 136 TTRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR--RLVQAADSASVCLSKGLGAP 212 (359)
Q Consensus 136 ~~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~~d~~~~s~~K~~g~~ 212 (359)
++++|++++ .++.+|.. .+.+++++|+++|++||+++|+||+|.. +.+.+.... .....+| +.|++|.+++.
T Consensus 184 ~~aaiiiep-~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g--~g~~g~~~~~~~~~~~pd--i~s~sK~l~~G 258 (403)
T PRK05093 184 HTCAVVVEP-IQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTG--MGRTGDLFAYMHYGVTPD--ILTSAKALGGG 258 (403)
T ss_pred CeEEEEEec-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC--CCCCccchhhhhcCCCCC--EEEecccccCC
Confidence 789999974 33244443 4779999999999999999999999752 233333211 1112345 34778999743
Q ss_pred ee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhcCCCce--E-ecCCc
Q 018240 213 VG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQLKGLR--V-DVDAV 287 (359)
Q Consensus 213 ~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~~~g~~--~-~~~~~ 287 (359)
.. |++++++++++.+... ..+.++..++..++++..+++... ++..+++.++.+++.+.|+++ +.. + ...+.
T Consensus 259 ~rig~vv~~~~i~~~l~~~--~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~ 335 (403)
T PRK05093 259 FPIGAMLTTAEIASHFKVG--THGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKI-NQKYGVFSEIRG 335 (403)
T ss_pred cceEEEEEcHHHHhhcCCC--CCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH-HhhCCCeEeEee
Confidence 22 7888898888876432 223344456666777776664432 235667788889999999876 221 1 12234
Q ss_pred cceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 288 ETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.+.++++.++.....+..++.+.|.++||.+.+.+..++|++++..++++++++++++|++++.++
T Consensus 336 ~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 336 MGLLIGAELKPQYKGRARDFLNAAAEEGVMVLVAGPDVLRFAPSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred CceEEEEEecCcchhHHHHHHHHHHHCCeEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 577788888642112567899999889999988777899999888889999999999999998764
No 204
>PLN02368 alanine transaminase
Probab=99.96 E-value=6.7e-27 Score=206.94 Aligned_cols=274 Identities=13% Similarity=0.113 Sum_probs=187.2
Q ss_pred hHHHHHHHHHcCC-C--CCCccCCChHHHHHHHHHHHHh----CCC---CeEEcCCc-hHHHHHHHHHhhhhcCCeEEec
Q 018240 16 PTEAMRAAMASAE-V--DDDVLMHDPTAFRLETEMAKVM----GKE---AGLFVPSG-TMGNLISVLVHCETRGSEVILG 84 (359)
Q Consensus 16 ~~~~~~~a~~~~~-~--~~~~~~~~~~~~~l~~~la~~~----~~~---~~~~~~~g-t~a~~~~l~~~~~~~g~~vl~~ 84 (359)
|.+.+.+++.... . ....|+...+..+|++++++++ |.+ ..+++++| ++++..++.+++.++||.|+++
T Consensus 82 p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~ 161 (407)
T PLN02368 82 PADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVP 161 (407)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEe
Confidence 5566666665421 1 2335777778899999999988 432 23555555 5576677777663589999999
Q ss_pred CCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHH
Q 018240 85 DNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSV 162 (359)
Q Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i 162 (359)
+|+|.... ..+...|.+++.++.+. ++.+|++.+++.+++.... ..+++++++.+| +||||.+++.+++++|
T Consensus 162 ~P~Y~~y~---~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~--~~~~k~l~l~nP-~NPTG~v~s~e~l~~l 235 (407)
T PLN02368 162 VPQYPLYS---ATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSK--GITVRAMVIINP-GNPTGQCLSEANLREI 235 (407)
T ss_pred CCCCccHH---HHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhc--CCCeEEEEEECC-CCCCCccCCHHHHHHH
Confidence 99977644 34777888999887653 4789999999998731000 026888888565 6699999999999999
Q ss_pred HHHHHHcCcEEEEecccccchhhh--cCchhHhhh----c----CccEEEE-eccccC-CCcee--eEEe---cCHHHHH
Q 018240 163 GEIAKKHGLKLHIDGARIFNAAVA--LGVPVRRLV----Q----AADSASV-CLSKGL-GAPVG--SVIV---GSKEFIK 225 (359)
Q Consensus 163 ~~~~~~~~~~li~D~a~~~~~~~~--~~~~~~~~~----~----~~d~~~~-s~~K~~-g~~~g--g~~~---~~~~~~~ 225 (359)
+++|++||++||+||+|....+.. ...+...+. . ...++++ |+||.| +.++. ||++ .++++++
T Consensus 236 ~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~ 315 (407)
T PLN02368 236 LKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVE 315 (407)
T ss_pred HHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHH
Confidence 999999999999999964433221 112222221 0 1235555 999998 66554 8887 5888988
Q ss_pred HHHHHHHhhCCCcchhHHHHHHHHHHHH----------HhH---HHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEE
Q 018240 226 KARRLRKTLGGGMRQVGVLCAAALVALQ----------ENV---LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIV 292 (359)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~~~---~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~ 292 (359)
.+..... ...+ .+.+.+.++..+++ .+. +..++.++++++.+.+.|+++||+.+. .|.++.++
T Consensus 316 ~~~~~~~-~~~~--~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~-~P~Gafy~ 391 (407)
T PLN02368 316 EIYKVAS-IALS--PNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCN-FTEGAMYS 391 (407)
T ss_pred HHHHHhc-ccCC--CCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeC-CCCeeeEe
Confidence 8876532 2222 23344445554443 122 224667888999999999999998874 45678889
Q ss_pred EEEeccc
Q 018240 293 YFEITED 299 (359)
Q Consensus 293 ~~~~~~~ 299 (359)
|++++.+
T Consensus 392 ~~~i~lp 398 (407)
T PLN02368 392 FPQIKLP 398 (407)
T ss_pred ccCCCCC
Confidence 9777653
No 205
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.4e-26 Score=201.91 Aligned_cols=303 Identities=15% Similarity=0.160 Sum_probs=206.7
Q ss_pred cccccCCCCC-ChHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhCCCC-eEEcCCchHHHHHHHHHhhhhcCCe
Q 018240 5 TVDLRSDTVT-KPTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMGKEA-GLFVPSGTMGNLISVLVHCETRGSE 80 (359)
Q Consensus 5 ~id~~~~~~~-~~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~gt~a~~~~l~~~~~~~g~~ 80 (359)
.|||+++.+. ++++.+.+++.+.... ...|. .++..+++++++++++.+. .+++++|++..+..+..++ +|++
T Consensus 20 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~--~gd~ 96 (337)
T PRK03967 20 RIWLDKNENPFDLPEELKEEIFEELKRVPFNRYP-HITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF--EGKH 96 (337)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHhhcCccccCC-CCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh--CCCe
Confidence 5889887665 4457888888765432 23454 4578999999999999764 4666666655544444444 7899
Q ss_pred EEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHH
Q 018240 81 VILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTD 160 (359)
Q Consensus 81 vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~ 160 (359)
|+++.|+|.. +. ..+...|.+++.++.+.++.+|++.+++.+. +++++++.+ ++||||.+++.+++
T Consensus 97 V~v~~P~y~~-~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~---------~~~~v~~~~-P~NPtG~~~~~~~l- 162 (337)
T PRK03967 97 IVITPPTFGM-YS--FYAKLNGIPVIDVPLKEDFTIDGERIAEKAK---------NASAVFICS-PNNPTGNLQPEEEI- 162 (337)
T ss_pred EEEeCCChHH-HH--HHHHHcCCeEEEeecCCCCCcCHHHHHHhcc---------CCCEEEEeC-CCCCCCCCCCHHHH-
Confidence 9999999764 44 3467889999999877778899999887543 567888755 57799999996554
Q ss_pred HHHHHHHHcCcEEEEecccccchhhhcCchhHhhh-cCccEEEE-eccccCCCcee--eEEecCHHHHHHHHHHHHhhCC
Q 018240 161 SVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV-QAADSASV-CLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGG 236 (359)
Q Consensus 161 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~d~~~~-s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~ 236 (359)
.+++ ++++++|+||+|.. +. +.+...+. ....++++ |+||.||.|+- ||+++++++++.+......+
T Consensus 163 --~~i~-~~~~~ii~De~y~~--~~--~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~~~-- 233 (337)
T PRK03967 163 --LKVL-ETGKPVVLDEAYAE--FS--GKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKPPF-- 233 (337)
T ss_pred --HHHH-hcCCEEEEECchhh--hc--ccchHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcCCC--
Confidence 4555 47999999999643 21 11222222 12345554 99999996543 99999999998887665432
Q ss_pred CcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhc
Q 018240 237 GMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEH 314 (359)
Q Consensus 237 ~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 314 (359)
..+...+.++...++ +...+.++...++++.+.+.|.+. . .+..++++|+.++ +.+.|.++
T Consensus 234 --~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----~--~~~~~~~~~~~~~---------~~~~l~~~ 296 (337)
T PRK03967 234 --SLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY----A--YPSDANFLLLKLD---------AYDYLLEN 296 (337)
T ss_pred --CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC----c--CCCCCcEEEEhHH---------HHHHHHHC
Confidence 223444444444443 222224445556677778888764 1 2457888887652 56888889
Q ss_pred CceeccC---CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 315 GVLVMPE---SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 315 gi~~~~~---~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
||.+.+. ..+++|+++. +.++.++++++|+++.+.+
T Consensus 297 gi~v~~~~~~~~~~~Ri~~~---~~~~~~~l~~~l~~~~~~~ 335 (337)
T PRK03967 297 GIVVRKLSGRLEGHIRVTVG---KREENDEFIKALKEIKEGY 335 (337)
T ss_pred CEEEEeCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHHhc
Confidence 9998544 2468999983 6788889999998876654
No 206
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.96 E-value=1.5e-26 Score=202.71 Aligned_cols=285 Identities=16% Similarity=0.130 Sum_probs=210.1
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
+|....||+.++++.|.+.+++++||++|+..++.+++ ++||+|+++++.|.+..... ......|+++..++..
T Consensus 49 nPt~~~lE~~lA~l~g~~~~~~~~sG~~Ai~~al~all-~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~---- 123 (377)
T TIGR01324 49 TLTHFALQDAMCELEGGAGCYLYPSGLAAVTNSILAFV-KAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL---- 123 (377)
T ss_pred CccHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhc-CCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC----
Confidence 57789999999999999999999999999999999887 59999999999986654211 1234567777666432
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
+.+.+++.++ +++++|+++++.| |+|...+ +++|+++|+++|+++|+|++|+.+... .++.
T Consensus 124 -~~e~l~~~i~--------~~tklV~lesp~N-p~g~~~d---l~~I~~la~~~g~~livD~t~a~g~~~------~pl~ 184 (377)
T TIGR01324 124 -IGEDIATLIQ--------PNTKVLFLEAPSS-ITFEIQD---IPAIAKAARNPGIVIMIDNTWAAGLLF------KPLE 184 (377)
T ss_pred -CHHHHHHhcC--------CCceEEEEECCCC-CCCcHHH---HHHHHHHHHHcCCEEEEECCCcccccc------Cccc
Confidence 3378888888 7899999977665 8888654 999999999999999999998665432 1233
Q ss_pred cCccEEEEeccccCCCc---eeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHH
Q 018240 196 QAADSASVCLSKGLGAP---VGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAE 272 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 272 (359)
.++|+++.|++|+++++ .||+++++++..+.++.....+|... ++..+.....+++.... ++++..+++..+.+
T Consensus 185 ~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l--~p~~a~~~~rgl~tl~~-R~~~~~~~a~~la~ 261 (377)
T TIGR01324 185 HGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMV--DADDAYTTLRGLRTLGV-RLKQHQESSLAIAK 261 (377)
T ss_pred cCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCC--CHHHHHHHHhhhhhHHH-HHHHHHHHHHHHHH
Confidence 48999999999999865 35888888888777765555555555 55666666677765444 88889999999999
Q ss_pred HHhcCCCce-EecCC---------------ccceEEEEEeccchHHHHHHHHHHHHhcCceeccC---------------
Q 018240 273 GLNQLKGLR-VDVDA---------------VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE--------------- 321 (359)
Q Consensus 273 ~l~~~~g~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~--------------- 321 (359)
.|++.|.+. +..|. ..+.++.|.+.........+|.+.|+-.++.+.-|
T Consensus 262 ~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~~~~~ 341 (377)
T TIGR01324 262 WLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFGLGYSWGGYESLALCNQPELGH 341 (377)
T ss_pred HHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEeccCCCccceeecCCCCCCH
Confidence 999987663 33321 34667778886412345678888886655543111
Q ss_pred --------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 322 --------SSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 322 --------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.++.+|+++. + |+.+++++.|.+++++
T Consensus 342 ~~~~~~~~~~~liR~svG--l--E~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 342 RPNIKRNLEGPLIRVHIG--L--ENVDDLKADLKAGFEA 376 (377)
T ss_pred HHHHhccCCCCEEEEEeC--C--CCHHHHHHHHHHHHhc
Confidence 1235899985 3 5778888888877764
No 207
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.96 E-value=3.7e-27 Score=186.99 Aligned_cols=326 Identities=16% Similarity=0.171 Sum_probs=246.5
Q ss_pred ccccccccCCCCCChH--HHHHHHHHcCCCC--------CCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHH
Q 018240 2 VTRTVDLRSDTVTKPT--EAMRAAMASAEVD--------DDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 2 ~~~~id~~~~~~~~~~--~~~~~a~~~~~~~--------~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~ 71 (359)
+..+++|..+++.+-+ |++.++-.++... ....+....+..||..|+++.+.+++++++++-.|+..++.
T Consensus 66 ~k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED~ilypscfdANag~fe 145 (417)
T KOG1359|consen 66 DKKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGREDTILYPSCFDANAGAFE 145 (417)
T ss_pred ccceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCCceEEeccccccchHHHH
Confidence 4567899888887554 8887777664432 11345567789999999999999999999999999999999
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018240 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
++. .|.+.|+-++..|.+... + .++.. ..+.+|+-+++..+....+ .+.++|..+...+ ..|
T Consensus 146 ail-~pedAvfSDeLNhASIId-G--irLck---------ry~h~dv~~l~~~l~~a~k----~r~klv~TDg~FS-MDG 207 (417)
T KOG1359|consen 146 AIL-TPEDAVFSDELNHASIID-G--IRLCK---------RYRHVDVFDLEHCLISACK----MRLKLVVTDGVFS-MDG 207 (417)
T ss_pred Hhc-Chhhhhhccccccchhhh-h--hHHHh---------hhccchhHHHHHHHHHhhh----heEEEEEecceec-cCC
Confidence 988 599999999999988876 3 33222 1223466666655553211 5778888888888 678
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh---cCccEEEEeccccCCCceeeEEecCHHHHHHHH
Q 018240 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV---QAADSASVCLSKGLGAPVGSVIVGSKEFIKKAR 228 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~ 228 (359)
-+.| +++|.+++++||.++++||+|+.|.++..|....+.. .++|++..+++|.+|+..||+..+++.+++-++
T Consensus 208 diaP---l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp~~li~llr 284 (417)
T KOG1359|consen 208 DIAP---LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGPKPLISLLR 284 (417)
T ss_pred Cccc---HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCChhHHHHHH
Confidence 8888 8999999999999999999999988887777666553 467888889999999888999999999999887
Q ss_pred HHHHhhCCCcchhHHHHHHHHHHHHHhH--HHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHH
Q 018240 229 RLRKTLGGGMRQVGVLCAAALVALQENV--LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAAC 306 (359)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (359)
+....+-...+.++.....+..++.-.. .....+.+.+.+++++..+.. |+.+.. ...++..+-+.+ ...+.+
T Consensus 285 qr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~a-GftIsg--~~hPI~pv~lGd--a~lA~~ 359 (417)
T KOG1359|consen 285 QRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAA-GFTISG--ASHPICPVMLGD--ARLASK 359 (417)
T ss_pred hcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc-CceecC--CCCCccceeccc--HHHHHH
Confidence 6555444334444444444444443222 125556777888899888877 999853 245555566654 257788
Q ss_pred HHHHHHhcCcee-------ccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 307 LLKKLEEHGVLV-------MPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 307 ~~~~l~~~gi~~-------~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+.++|.+.||++ +|.+...+|+.++..++++|+|++++++.++.+..
T Consensus 360 ~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~ 413 (417)
T KOG1359|consen 360 MADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFL 413 (417)
T ss_pred HHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhh
Confidence 999999999998 66788889999999999999999999999887654
No 208
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.96 E-value=6.1e-26 Score=197.54 Aligned_cols=306 Identities=22% Similarity=0.280 Sum_probs=217.3
Q ss_pred CCCChH-HHHHHHHHcCCCCCCccCC--ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCc
Q 018240 12 TVTKPT-EAMRAAMASAEVDDDVLMH--DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSH 88 (359)
Q Consensus 12 ~~~~~~-~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~ 88 (359)
++.++. +.. ...........|+. .|....+|+.++++.|.+.+++++||..|+..++.+++ ++||+|+++...|
T Consensus 28 tf~~~~~~~~--~~~~~~~~~~~Y~R~gnPt~~~le~~la~Le~g~~a~~~~SGmaAi~~~l~~ll-~~Gd~iv~~~~~Y 104 (386)
T PF01053_consen 28 TFVFDSAEEL--DAFAGEEKGYIYSRYGNPTVRALEQRLAALEGGEDALLFSSGMAAISAALLALL-KPGDHIVASDDLY 104 (386)
T ss_dssp BBBBSSHHHH--HHHTTSSSSCSBTTTC-HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHHS--TTBEEEEESSSS
T ss_pred cCcccchHHH--HhhcCCCCCcceeccccccHHHHHHHHHHhhcccceeeccchHHHHHHHHHhhc-ccCCceEecCCcc
Confidence 444444 444 33333334455654 68889999999999999999999999999999999998 5999999999998
Q ss_pred ceeeccc-cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHH
Q 018240 89 IHIYENG-GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAK 167 (359)
Q Consensus 89 ~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~ 167 (359)
.+++... ......|+++..++.. |++++++.++ +++++|+++++.| |+..+.+ +++|+++|+
T Consensus 105 ~~t~~~~~~~l~~~gv~v~~~d~~-----d~~~l~~~l~--------~~t~~v~~EspsN-P~l~v~D---l~~i~~~a~ 167 (386)
T PF01053_consen 105 GGTYRLLEELLPRFGVEVTFVDPT-----DLEALEAALR--------PNTKLVFLESPSN-PTLEVPD---LEAIAKLAK 167 (386)
T ss_dssp HHHHHHHHHCHHHTTSEEEEESTT-----SHHHHHHHHC--------TTEEEEEEESSBT-TTTB------HHHHHHHHH
T ss_pred CcchhhhhhhhcccCcEEEEeCch-----hHHHHHhhcc--------ccceEEEEEcCCC-ccccccc---HHHHHHHHH
Confidence 8876411 1244478888888655 9999999999 8999999988777 9888776 999999999
Q ss_pred HcC-cEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCc---eeeEEecC--HHHHHHHHHHHHhhCCCcchh
Q 018240 168 KHG-LKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAP---VGSVIVGS--KEFIKKARRLRKTLGGGMRQV 241 (359)
Q Consensus 168 ~~~-~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~---~gg~~~~~--~~~~~~~~~~~~~~~~~~~~~ 241 (359)
++| +++++|++ ++. +....++..++|+++.|.+|++++- .||+++.+ +++.+.++......|... +
T Consensus 168 ~~g~~~~vVDnT--~at----p~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~--~ 239 (386)
T PF01053_consen 168 EHGDILVVVDNT--FAT----PYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATL--S 239 (386)
T ss_dssp HTTT-EEEEECT--TTH----TTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B----
T ss_pred HhCCceEEeecc--ccc----eeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccc--h
Confidence 998 99999998 322 2334455558999999999999764 35766654 578888888888888776 5
Q ss_pred HHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCce-EecCC---------------ccceEEEEEeccchHHHHH
Q 018240 242 GVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLR-VDVDA---------------VETNIVYFEITEDSKLYAA 305 (359)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~ 305 (359)
+..+.....+++...- ++++..+++..+.+.|++.|.++ +..|. ..+..+.|.+... .....
T Consensus 240 p~da~ll~rgl~Tl~~-R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~-~~~~~ 317 (386)
T PF01053_consen 240 PFDAWLLLRGLRTLPL-RMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGG-EEAAR 317 (386)
T ss_dssp HHHHHHHHHHHTTHHH-HHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSH-HHHHH
T ss_pred HHHHHHHhcCCCcHHH-HHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccc-hhhhH
Confidence 6677777778877665 88999999999999999998775 44431 3456888999873 23566
Q ss_pred HHHHHHHhcCcee----------ccC-----------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 306 CLLKKLEEHGVLV----------MPE-----------------SSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 306 ~~~~~l~~~gi~~----------~~~-----------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.|.+.|+-.++.+ .|. .++.+|+++. + |+.+++++.|+++++
T Consensus 318 ~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvG--l--Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 318 RFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVG--L--EDPDDLIADLEQALE 386 (386)
T ss_dssp HHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE----S--S-HHHHHHHHHHHHH
T ss_pred hHHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEec--c--CCHHHHHHHHHHhcC
Confidence 7777774322211 111 2356999984 3 678888888888775
No 209
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.96 E-value=3.8e-26 Score=201.75 Aligned_cols=287 Identities=20% Similarity=0.186 Sum_probs=210.7
Q ss_pred CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCC
Q 018240 36 HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDG 114 (359)
Q Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 114 (359)
..|...++++.+++++|.+.+++++||++|+..++.+++ ++||+|+++.+.|.+.+... ..+...|++++.++..
T Consensus 63 ~~pt~~~Le~~lA~l~g~~~~l~~~sgt~Ai~~~l~al~-~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~--- 138 (394)
T PRK07050 63 ATPTSLALAQRLAEIEGGRHALLQPSGLAAISLVYFGLV-KAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPL--- 138 (394)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEeccHHHHHHHHHHHHh-CCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCC---
Confidence 367789999999999999988999999999999999987 69999999999988765311 1256678888888643
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh
Q 018240 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
+.+++++.++ +++++|+++++.| |+|. ..++++|.++|+++|+++|+|++|..+.. ..++
T Consensus 139 --~~~~l~~~i~--------~~tklV~le~p~N-p~~~---~~di~~I~~ia~~~gi~livD~a~a~~~~------~~~l 198 (394)
T PRK07050 139 --IGAGIADLIQ--------PNTRLIWLEAPGS-VTME---VPDVPAITAAARARGVVTAIDNTYSAGLA------FKPF 198 (394)
T ss_pred --CHHHHHHhcC--------CCCeEEEEECCCC-CCcc---HhhHHHHHHHHHHcCCEEEEECCcccccc------cCHH
Confidence 5578888887 7899999977655 8875 45699999999999999999999755432 2233
Q ss_pred hcCccEEEEeccccCCCce---ee-EEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHH
Q 018240 195 VQAADSASVCLSKGLGAPV---GS-VIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLL 270 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~~---gg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 270 (359)
..++|+++.|++|++++.. || ++..++++.++++..+...|.+. ++..+..+...++.... ++++..+++..+
T Consensus 199 ~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~--~~~~a~l~lr~l~tl~~-Rl~~~~~~a~~l 275 (394)
T PRK07050 199 EHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGV--SADDCSLVLRGLPSLQV-RLAAHDRSALEV 275 (394)
T ss_pred HcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCC--CHHHHHHHHcCCCcHHH-HHHHHHHHHHHH
Confidence 3478999999999996532 45 55568889898888887777766 44444555555666555 888888999999
Q ss_pred HHHHhcCCCceE-ecC---------------CccceEEEEEeccc-hHHHHHHHHHHHHhcCceeccC------------
Q 018240 271 AEGLNQLKGLRV-DVD---------------AVETNIVYFEITED-SKLYAACLLKKLEEHGVLVMPE------------ 321 (359)
Q Consensus 271 ~~~l~~~~g~~~-~~~---------------~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~~~~~------------ 321 (359)
.+.|++.|.+.. ..+ ...+..+.|.+... .....++|.+.|+..++.+.-|
T Consensus 276 a~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~ 355 (394)
T PRK07050 276 AEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIGWSWGGACSLAMPYDVA 355 (394)
T ss_pred HHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeeccccCCccceEeeCccc
Confidence 999998876642 211 12344566777542 1346788888887766654211
Q ss_pred ---------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 322 ---------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 322 ---------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.++.||+++. + |+.+.+++.|.+++++.
T Consensus 356 ~~~~~~~~~~~~~iR~svG--l--E~~~dl~~dl~~al~~~ 392 (394)
T PRK07050 356 SMRTAKWPHRGTLVRLYIG--L--EDEADLIADLEQALEAA 392 (394)
T ss_pred ccchhhcCCCCCEEEEEeC--c--CCHHHHHHHHHHHHHHh
Confidence 1246899985 3 56777777777777654
No 210
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.96 E-value=3.6e-26 Score=201.67 Aligned_cols=281 Identities=20% Similarity=0.240 Sum_probs=207.0
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.+...++++.+++++|.+.+++++||++|+..++.+++ ++||+|+++.+.|.+.+... ......|+++..++.+
T Consensus 53 ~p~~~~le~~la~l~g~~~~~~~~sG~~Ai~~al~al~-~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~---- 127 (380)
T TIGR01325 53 NPTVAAFEERIAALEGAERAVATATGMSAIQAALMTLL-QAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPT---- 127 (380)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCC----
Confidence 57789999999999999989999999999999998887 59999999998876654200 1245578888888654
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
|++++++.++ +++++|+++++. ||+|...+ +++|.++|+++|+++|+|++++.+.. .. ++.
T Consensus 128 -d~~~l~~~i~--------~~tklV~le~p~-np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~---~~---pl~ 188 (380)
T TIGR01325 128 -DLNAWEAAVK--------PNTKLVFVETPS-NPLGELVD---IAALAELAHAIGALLVVDNVFATPVL---QQ---PLK 188 (380)
T ss_pred -CHHHHHHhcC--------CCceEEEEECCC-CCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc---CC---chh
Confidence 7899998887 688999997665 49999887 89999999999999999999753321 11 122
Q ss_pred cCccEEEEeccccCCCc---eeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHH
Q 018240 196 QAADSASVCLSKGLGAP---VGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAE 272 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 272 (359)
.++|+++.|++|+++++ .||++++++++.+.++......+.+. ++..++.+..+++.... ++++..+++..+.+
T Consensus 189 ~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~--~p~~a~~~l~~l~tl~~-r~~~~~~~a~~la~ 265 (380)
T TIGR01325 189 LGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAM--SPFNAWVLLKGLETLSL-RMQKQFDSALAIAE 265 (380)
T ss_pred hCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCC--CHHHHHHHHhccCcHHH-HHHHHHHHHHHHHH
Confidence 37899999999999764 45888899888888876666666554 44555566666666555 78888899999999
Q ss_pred HHhcCCCce-EecC---------------CccceEEEEEeccchHHHHHHHHHHHHhcCcee----------ccC-----
Q 018240 273 GLNQLKGLR-VDVD---------------AVETNIVYFEITEDSKLYAACLLKKLEEHGVLV----------MPE----- 321 (359)
Q Consensus 273 ~l~~~~g~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~----------~~~----- 321 (359)
.|++.|+++ +..| ...+.++.|.+.. ......|.+.|+--.+.+ .|.
T Consensus 266 ~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~--~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~ 343 (380)
T TIGR01325 266 WLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVAD--RAAAWKVLDAVELVSITNNLGDAKSTITHPATTTHG 343 (380)
T ss_pred HHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECC--HHHHHHHHHcCCcceEcccCCCCCeeeeCCCccCcc
Confidence 999987764 2222 1346678888863 235667777774332221 111
Q ss_pred ------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 322 ------------SSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 322 ------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
.++.+|+++. + |+.+.+++.|++++
T Consensus 344 ~~~~~~~~~~gi~~~liR~svG--l--E~~~dl~~dl~~al 380 (380)
T TIGR01325 344 RMQPEERAAAGIGDGLVRLSVG--L--EDVDDLIADLKRAL 380 (380)
T ss_pred cCCHHHHHhcCCCCCeEEEEec--c--CCHHHHHHHHHhhC
Confidence 2356999985 3 57777777777653
No 211
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.96 E-value=4.6e-26 Score=198.61 Aligned_cols=291 Identities=15% Similarity=0.121 Sum_probs=216.8
Q ss_pred CccCC--ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceee
Q 018240 32 DVLMH--DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTV 108 (359)
Q Consensus 32 ~~~~~--~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v 108 (359)
..|+. .|....||+.++++-|.+.+++++||+.|+..++.+++ ++||+|++++..|.+.+... ...+..|+++..+
T Consensus 54 ~~YsR~~nPt~~~le~~la~LEg~~~a~~~~SGmaAi~~~~~~ll-~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~v 132 (395)
T PRK08114 54 LFYGRRGTLTHFSLQEAMCELEGGAGCALYPCGAAAVANAILAFV-EQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWF 132 (395)
T ss_pred ccccCCCChhHHHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHHHc-CCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEE
Confidence 34553 78899999999999999999999999999999999887 59999999998887776411 1135578888888
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcC--cEEEEecccccchhhh
Q 018240 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHG--LKLHIDGARIFNAAVA 186 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~--~~li~D~a~~~~~~~~ 186 (359)
+.. |.+.+++.++ +++++|+++++.| |+|.+.| +++|+++|+++| +++++|++++.+.
T Consensus 133 d~~-----d~~~l~~~l~--------~~TrlV~~EtpsN-p~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~--- 192 (395)
T PRK08114 133 DPL-----IGADIAKLIQ--------PNTKVVFLESPGS-ITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGV--- 192 (395)
T ss_pred CCC-----CHHHHHHhcC--------CCceEEEEECCCC-CCCEeec---HHHHHHHHHHhCCCCEEEEECCCcccc---
Confidence 643 7899999998 7899999988776 9999887 899999999984 9999999964321
Q ss_pred cCchhHhhhcCccEEEEeccccCCCc---eeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhH
Q 018240 187 LGVPVRRLVQAADSASVCLSKGLGAP---VGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGD 263 (359)
Q Consensus 187 ~~~~~~~~~~~~d~~~~s~~K~~g~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 263 (359)
.+.++..++|+++.|.+|+++++ .+|+++.+++..+.++......|... ++..++....+++...- ++++.
T Consensus 193 ---~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~~~--~p~~a~l~~rgl~TL~l-R~~~~ 266 (395)
T PRK08114 193 ---LFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQMV--DADTAYMTSRGLRTLGV-RLRQH 266 (395)
T ss_pred ---ccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccCCC--CHHHHHHHHcCCCcHHH-HHHHH
Confidence 13333348999999999999887 44888888877777766666666655 66667777777776554 88999
Q ss_pred HHHHHHHHHHHhcCCCce-EecCC---------------ccceEEEEEeccc-hHHHHHHHHHHHHhcCcee--------
Q 018240 264 HKKAKLLAEGLNQLKGLR-VDVDA---------------VETNIVYFEITED-SKLYAACLLKKLEEHGVLV-------- 318 (359)
Q Consensus 264 ~~~~~~l~~~l~~~~g~~-~~~~~---------------~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~~-------- 318 (359)
.+++..+.+.|++.|.++ +..|. ..+.++.|.+... .......|.+.|+--.+.+
T Consensus 267 ~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~~~l~l~~~a~SlGg~~SL 346 (395)
T PRK08114 267 EESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYLDNFSLFSMAYSWGGFESL 346 (395)
T ss_pred HHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHHHhCCcceeecccCCccce
Confidence 999999999999987664 33331 3466788888641 1234556666664322111
Q ss_pred -c---c-------------CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 319 -M---P-------------ESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 319 -~---~-------------~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
. | -..+.+|+++. + |+++.+++-|.++++++
T Consensus 347 i~~~~~~~~~~~~~~~~~~~~~~liRlSvG--l--Ed~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 347 ILANQPEEIAAIRPAGEVDFTGTLIRLHIG--L--EDVDDLIADLAAGFARI 394 (395)
T ss_pred eccCCchhhhccCChhHhcCCCCeEEEEec--c--CCHHHHHHHHHHHHHhh
Confidence 1 0 01256999985 3 57888888888887653
No 212
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.96 E-value=2.4e-26 Score=203.02 Aligned_cols=284 Identities=20% Similarity=0.179 Sum_probs=205.8
Q ss_pred CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCC
Q 018240 36 HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDG 114 (359)
Q Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 114 (359)
..+...++|+.+++++|.+.++.++||++|+..++.+++ ++||+|+++.+.|.+.+... ......|+++..++..
T Consensus 59 ~~p~~~~Le~~lA~~~g~~~~i~~~sG~~Ai~~~l~all-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~--- 134 (388)
T PRK07811 59 GNPTRTALEEQLAALEGGAYGRAFSSGMAATDCLLRAVL-RPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLS--- 134 (388)
T ss_pred CCccHHHHHHHHHHHhCCCceEEeCCHHHHHHHHHHHHh-CCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCC---
Confidence 357789999999999999999999999999999999887 59999999999987655311 1133357776666543
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh
Q 018240 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
|++++++.++ +++++|+++++. ||||.+.+ +++|.++|+++|+++|+|++++.+.. .. ++
T Consensus 135 --d~e~l~~~i~--------~~tklV~ie~p~-NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~---~~---p~ 194 (388)
T PRK07811 135 --DLDAVRAAIT--------PRTKLIWVETPT-NPLLSITD---IAALAELAHDAGAKVVVDNTFASPYL---QQ---PL 194 (388)
T ss_pred --CHHHHHHhcC--------cCCeEEEEECCC-CCcceecC---HHHHHHHHHHcCCEEEEECCCCcccc---CC---ch
Confidence 8999999998 789999997655 49998765 89999999999999999999754322 11 22
Q ss_pred hcCccEEEEeccccCCCce---eeEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHH
Q 018240 195 VQAADSASVCLSKGLGAPV---GSVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLL 270 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~~---gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 270 (359)
..++|+++.|++|+++++. ||+++. ++++.+.++..+...+... ++..++.+..+++.... ++++..+++..+
T Consensus 195 ~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~--s~~~a~l~~~~L~tl~~-R~~~~~~na~~l 271 (388)
T PRK07811 195 ALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVP--GPFDAYLTLRGLKTLAV-RMDRHSENAEAV 271 (388)
T ss_pred hhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCC--CHHHHHHHHhccCcHHH-HHHHHHHHHHHH
Confidence 2378999999999998763 576665 6777777766655555544 44555566666666444 778888999999
Q ss_pred HHHHhcCCCce-EecCC---------------ccceEEEEEeccchHHHHHHHHHHHHhcCcee----------ccC---
Q 018240 271 AEGLNQLKGLR-VDVDA---------------VETNIVYFEITEDSKLYAACLLKKLEEHGVLV----------MPE--- 321 (359)
Q Consensus 271 ~~~l~~~~g~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~----------~~~--- 321 (359)
.+.|++.|++. +..|. ..+.++.|.++. ......+|.+.|+--.+.. .|.
T Consensus 272 a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~ 350 (388)
T PRK07811 272 AEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAG-GEEAARDFCARTKVFTLAESLGGVESLIEHPSAMT 350 (388)
T ss_pred HHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCC-CHHHHHHHHHhCCcceeeccCCCCcceEeCCcccC
Confidence 99999988775 33331 246678888864 2235667777774322221 110
Q ss_pred -----------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 322 -----------SSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 322 -----------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.++.+|+++. + |+.+.+++.|.++++
T Consensus 351 ~~~~~~~~~gi~~~liR~svG--l--E~~~dl~~dl~~al~ 387 (388)
T PRK07811 351 HASTAGSQLEVPDDLVRLSVG--I--EDVADLLADLEQALG 387 (388)
T ss_pred cccCCHhhcCCCCCEEEEEeC--C--CCHHHHHHHHHHHhh
Confidence 1356999995 3 477778888877764
No 213
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.96 E-value=3.4e-26 Score=201.79 Aligned_cols=310 Identities=17% Similarity=0.204 Sum_probs=218.7
Q ss_pred CCCChHHHHHHHHHcCCCCCCccC--CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcc
Q 018240 12 TVTKPTEAMRAAMASAEVDDDVLM--HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHI 89 (359)
Q Consensus 12 ~~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~ 89 (359)
++.++..+..+++.+.......|+ .+|....||+.++++.|..+++.++||+.|+..++.+++ ++||+|+++.+.|.
T Consensus 33 t~~f~~~~~~~~~~~~~~~g~~ysR~~nPtv~~lE~~la~leg~~~av~~~SG~aAi~~al~all-~~GD~VI~~~~~Y~ 111 (432)
T PRK06702 33 TYKYDTSDDLAALFNLEAEGYIYTRIGNPTLAAFEQKLAELEGGVGAVATASGQAAIMLAVLNIC-SSGDHLLCSSTVYG 111 (432)
T ss_pred ceecCCHHHHHHHHhccccCceeECCCCcHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhc-CCCCEEEECCCchH
Confidence 344445444444444322334454 368899999999999999999999999999999999887 69999999999988
Q ss_pred eeeccc-cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHH
Q 018240 90 HIYENG-GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKK 168 (359)
Q Consensus 90 ~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~ 168 (359)
+++... ......|+++..++. .+|+++++++++ ++|++|++++ ++||++.+.+ +++|+++|++
T Consensus 112 ~T~~~~~~~l~~~Gi~v~~vd~----~~d~~~l~~~I~--------~~Tk~I~~e~-pgnP~~~v~D---i~~I~~iA~~ 175 (432)
T PRK06702 112 GTFNLFGVSLRKLGIDVTFFNP----NLTADEIVALAN--------DKTKLVYAES-LGNPAMNVLN---FKEFSDAAKE 175 (432)
T ss_pred HHHHHHHHHHHHCCCEEEEECC----CCCHHHHHHhCC--------cCCeEEEEEc-CCCccccccC---HHHHHHHHHH
Confidence 666410 114567888888853 358899999999 7899999976 5669999887 8999999999
Q ss_pred cCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCce---eeEEecCH----------HHH-----------
Q 018240 169 HGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV---GSVIVGSK----------EFI----------- 224 (359)
Q Consensus 169 ~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~---gg~~~~~~----------~~~----------- 224 (359)
+|+++|+|+++ . .+....++..++|+++.|+||++++.. ||+++... ++.
T Consensus 176 ~gi~livD~T~--~----tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~ 249 (432)
T PRK06702 176 LEVPFIVDNTL--A----TPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSY 249 (432)
T ss_pred cCCEEEEECCC--C----chhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccch
Confidence 99999999984 2 122233455589999999999997643 36555211 111
Q ss_pred ----------HHHH-HHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCce-EecCC------
Q 018240 225 ----------KKAR-RLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLR-VDVDA------ 286 (359)
Q Consensus 225 ----------~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~~------ 286 (359)
.+.+ .....+| ..+++..++.+..+++.... ++++..+++..+.+.|++.|.+. +..|.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~g--~~~sp~~a~l~~rgL~Tl~l-R~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~ 326 (432)
T PRK06702 250 VQNFGAAAYIVKARVQLLRDYG--NCMSPFNAYISNIGLETLHL-RMERHSENALAVAKWLADHERIEWVNYPGLDSNEN 326 (432)
T ss_pred hhccchhhHHHHHHHHHHHHcc--CCCCHHHHHHHHhccCcHHH-HHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCcc
Confidence 1111 1222334 35577888888888877555 88888999999999999987765 32221
Q ss_pred ----------ccceEEEEEeccchHHHHHHHHHHHHhcCcee----------ccC-----------------CCcEEEEE
Q 018240 287 ----------VETNIVYFEITEDSKLYAACLLKKLEEHGVLV----------MPE-----------------SSTRVRIV 329 (359)
Q Consensus 287 ----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~----------~~~-----------------~~~~lRi~ 329 (359)
..+.++.|.++. ....+.+|.+.|+-..+.+ .|. ..+.+|++
T Consensus 327 ~~l~~~~~~~g~gg~~sf~l~~-~~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlS 405 (432)
T PRK06702 327 YSLAQKYLKKGASGVLTFGIKG-GLEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLS 405 (432)
T ss_pred HHHHHHhCcCCCceEEEEEecC-CHHHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEE
Confidence 235677888864 2235667777774332222 111 23569999
Q ss_pred eCCCCCHHHHHHHHHHHHHHHHH
Q 018240 330 VHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 330 ~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
+. + |+.+.+++-|.++++.
T Consensus 406 vG--l--Ed~eDLi~Dl~~Al~~ 424 (432)
T PRK06702 406 VG--I--EDVSDIIADLEAALVG 424 (432)
T ss_pred ec--c--CCHHHHHHHHHHHHhc
Confidence 85 3 6788888888888764
No 214
>PRK06460 hypothetical protein; Provisional
Probab=99.96 E-value=3.8e-26 Score=200.88 Aligned_cols=285 Identities=18% Similarity=0.192 Sum_probs=201.1
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.+...++++.+++++|.+.++++++|++|+..++.+++ ++||+|+++.+.|.+.+... ..++..|+++..++.+
T Consensus 44 ~p~~~~L~~~lA~l~g~~~~v~~~sG~~ai~~~l~al~-~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~---- 118 (376)
T PRK06460 44 NPTVLELTKKIVELENAEMGVAFSSGMGAISTTALALL-KPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPG---- 118 (376)
T ss_pred CccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHh-CCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCC----
Confidence 67889999999999999989999999999888888887 59999999987664433200 2256678887777643
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
+.+.+++.++ +++++|++++++| |||.+++ +++|.++|+++|+++|+|++|..+. ...++.
T Consensus 119 -~~~~l~~~~~--------~~tklV~l~sp~N-PtG~v~d---~~~I~~la~~~g~~vivDea~~~~~------~~~~l~ 179 (376)
T PRK06460 119 -SDNIIEKAKS--------KRYDVVFVENITN-PLLRVVD---ITELSKVCKENGSILIVDATFSTPI------NQKPLE 179 (376)
T ss_pred -CHHHHHHhcC--------CCceEEEEECCCC-CCCcccC---HHHHHHHHHHcCCEEEEECCcCccc------cCChhh
Confidence 3344554444 6889999966555 9999998 6788999999999999999964321 112223
Q ss_pred cCccEEEEeccccCCCc---eeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHH
Q 018240 196 QAADSASVCLSKGLGAP---VGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAE 272 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 272 (359)
.+.|+++.|+||++++. .+|++++++++++.++.....++.+. ++..+..++.+++. ++.++++..++++++.+
T Consensus 180 ~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~--~~~~a~~~l~~~~~-l~~r~~~~~~n~~~l~~ 256 (376)
T PRK06460 180 LGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSL--DPHAAYLTLRGIKT-LKIRMDVINRNAEQIAE 256 (376)
T ss_pred cCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCC--CHHHHHHHHhchhh-HHHHHHHHHHHHHHHHH
Confidence 36788889999999764 36899999999999887777776654 33444444444433 34478889999999999
Q ss_pred HHhcCCCce-EecC---------------CccceEEEEEeccchHHHHHHHHHHHHhcCcee----------ccC-----
Q 018240 273 GLNQLKGLR-VDVD---------------AVETNIVYFEITEDSKLYAACLLKKLEEHGVLV----------MPE----- 321 (359)
Q Consensus 273 ~l~~~~g~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~----------~~~----- 321 (359)
.|++.|.+. +..| ...+..+.|.+.. .......|.+.|+--.+.+ .|.
T Consensus 257 ~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~-~~~~~~~~~~~l~~~~~~~s~Gg~~sl~~~p~~~~~~ 335 (376)
T PRK06460 257 FLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNG-GQESALKVMKSLKLIIPAQTLGGVNSVISHPATMSHR 335 (376)
T ss_pred HHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC-cHHHHHHHHHhCCcceeccCCCCCceEEeCccccccc
Confidence 999887663 3332 1346678888864 2235666777663211111 111
Q ss_pred ------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 322 ------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 322 ------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
..+.+|+++. + |+.+.+++.|++++..+
T Consensus 336 ~~~~~~~~~~gi~~~liR~svG--l--E~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 336 TLSLEERKIVGITDSLLRLSVG--I--EDVNDLIEDLDRALSTL 375 (376)
T ss_pred cCCHHHHHhcCCCCCeEEEEec--c--CCHHHHHHHHHHHHHhh
Confidence 2356999995 3 57888888888887653
No 215
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.96 E-value=3.6e-26 Score=203.37 Aligned_cols=286 Identities=22% Similarity=0.234 Sum_probs=206.7
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.|....|++.++++.|.+.+++++||+.|+..++..++ ++||+|+++.+.|...+... ..+...|++++.++..
T Consensus 63 ~p~~~~Le~~lA~leg~~~al~~~sG~~Ai~~al~~ll-~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~---- 137 (431)
T PRK08248 63 NPTTDVFEKRIAALEGGIGALAVSSGQAAITYSILNIA-SAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPS---- 137 (431)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCC----
Confidence 67789999999999999999999999999999999887 59999999999887654310 2245678898888754
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
|++++++.++ +++++|+++++ +||||.+.+ +++|.++|+++|+++|+|++++. + ....++.
T Consensus 138 -d~e~l~~ai~--------~~tklV~l~sp-~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~---~---~~~~pl~ 198 (431)
T PRK08248 138 -DPENFEAAIT--------DKTKALFAETI-GNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFAS---P---YLLRPIE 198 (431)
T ss_pred -CHHHHHHhcC--------CCCeEEEEECC-CCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCc---c---ccCChhH
Confidence 8999999998 68999999654 559999988 78999999999999999998632 1 1122233
Q ss_pred cCccEEEEeccccCCCc---eeeEEecCHHH---------------------------------HHHHHHHHHhhCCCcc
Q 018240 196 QAADSASVCLSKGLGAP---VGSVIVGSKEF---------------------------------IKKARRLRKTLGGGMR 239 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~---~gg~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~ 239 (359)
.++|+++.|++|++|++ .||+++.+.+. ...........|..
T Consensus 199 ~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~-- 276 (431)
T PRK08248 199 HGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAA-- 276 (431)
T ss_pred cCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCC--
Confidence 48999999999999875 34666643211 01111223334433
Q ss_pred hhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCce-EecC----------------CccceEEEEEeccchHH
Q 018240 240 QVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLR-VDVD----------------AVETNIVYFEITEDSKL 302 (359)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~----------------~~~~~~~~~~~~~~~~~ 302 (359)
.++..++....+++.... ++++..+++..+.+.|++.|+++ +..| ...+..+.|.+.. ...
T Consensus 277 l~p~~a~l~~rgl~tl~~-R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~-~~~ 354 (431)
T PRK08248 277 LSPFNSFLLLQGLETLHL-RMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGIKG-GVE 354 (431)
T ss_pred CCHHHHHHHhcCcCcHHH-HHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecC-CHH
Confidence 466777777777777655 88899999999999999988764 3332 1236678888864 223
Q ss_pred HHHHHHHHHHhcCceeccC---------------------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 303 YAACLLKKLEEHGVLVMPE---------------------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~~~~---------------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
....|.+.|+--.+.+.-| .++.+|+++. + |+.+++++-|.+++++.+
T Consensus 355 ~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG--l--Ed~~dL~~Dl~~Al~~~~ 429 (431)
T PRK08248 355 AGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVG--T--EAIDDILDDLRQAIRQSQ 429 (431)
T ss_pred HHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEec--c--CCHHHHHHHHHHHHHhhh
Confidence 5667777774322222111 2446999985 3 578888888888887653
No 216
>PRK08354 putative aminotransferase; Provisional
Probab=99.96 E-value=2.5e-26 Score=198.16 Aligned_cols=293 Identities=14% Similarity=0.126 Sum_probs=185.5
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCch-HHHHHHHHHhhhhcCCeEE
Q 018240 4 RTVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGT-MGNLISVLVHCETRGSEVI 82 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt-~a~~~~l~~~~~~~g~~vl 82 (359)
.+|||+.+.+..|++.+.+++.++......| +....+++.++++++. .+++++|+ +++..++ .++. +|+.|+
T Consensus 9 ~~i~l~~~~np~~p~~~~~a~~~~~~~~~~y---p~~~~l~~~ia~~~~~--~I~vt~G~~~al~~~~-~~~~-~gd~vl 81 (311)
T PRK08354 9 GLIDFSASVNPYPPEWLDEMFERAKEISGRY---TYYEWLEEEFSKLFGE--PIVITAGITEALYLIG-ILAL-RDRKVI 81 (311)
T ss_pred ceeEecCCCCCCCCHHHHHHHHHHHHHhhcC---CChHHHHHHHHHHHCC--CEEECCCHHHHHHHHH-HhhC-CCCeEE
Confidence 4689998855555578888887653332234 3357899999999985 35555555 5554444 5554 899999
Q ss_pred ecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHH
Q 018240 83 LGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSV 162 (359)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i 162 (359)
++.|+|..... .++..|.+++.++ +|++.+++.++ +++++++.+| |||||.+++.+++++|
T Consensus 82 v~~P~y~~~~~---~~~~~g~~~~~~~------~d~~~l~~~~~---------~~~~vi~~~P-~NPTG~~~~~~~l~~l 142 (311)
T PRK08354 82 IPRHTYGEYER---VARFFAARIIKGP------NDPEKLEELVE---------RNSVVFFCNP-NNPDGKFYNFKELKPL 142 (311)
T ss_pred EeCCCcHHHHH---HHHHcCCEEeecC------CCHHHHHHhhc---------CCCEEEEecC-CCCCCCccCHHHHHHH
Confidence 99999777543 4778888887653 48888888766 2456666555 6799999999999999
Q ss_pred HHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEE-EeccccCCCcee--eEEecCHHHHHHHHHHHHhhCCCcc
Q 018240 163 GEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSAS-VCLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGGGMR 239 (359)
Q Consensus 163 ~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~-~s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~~~~ 239 (359)
.++|+++|+++|+||+|..... .+.. .. ...+++ .|+||.|+.|+. ||+++ ..+.++.....+..
T Consensus 143 ~~~a~~~~~~li~De~y~~f~~--~~~~---~~-~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~~~~~~--- 210 (311)
T PRK08354 143 LDAVEDRNALLILDEAFIDFVK--KPES---PE-GENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVRMPWSI--- 210 (311)
T ss_pred HHHhhhcCcEEEEeCcchhccc--cccc---cC-CCcEEEEeccHhhcCCccceeeeeee---hHHHHHHcCCCccC---
Confidence 9999999999999999643322 1211 11 223444 499999996543 88877 44555444332222
Q ss_pred hhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceec
Q 018240 240 QVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVM 319 (359)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~ 319 (359)
+....+++...++...+ +..++.+.+++..+.+.+.-. . ++.++++++.+. +..++.+.|.++||.+.
T Consensus 211 -~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~-~-~~~~~~~~~~~~-----~~~~~~~~l~~~gv~v~ 278 (311)
T PRK08354 211 -GSTGYAFLEFLIEDDFE----HLRKTMPLIWREKERFEKALY-V-KSDANFFIKDVG-----DAEKFVEFLKRNGILVR 278 (311)
T ss_pred -CHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHhcC-C-CCCCcEEEEECC-----CHHHHHHHHHHCCeEEE
Confidence 22222222222222111 111222222222222111111 1 335677776553 35678899999999998
Q ss_pred cCC----CcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 320 PES----STRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 320 ~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
++. ++++||++ ...++.++++++|+++
T Consensus 279 ~g~~f~~~~~iRi~~---~~~~~~~~l~~al~~~ 309 (311)
T PRK08354 279 DCTSFGLPGYIRFSV---RDREENEKLIRALREW 309 (311)
T ss_pred ecccCCCCCeEEEEe---CCHHHHHHHHHHHHHh
Confidence 764 36899999 3566788888888764
No 217
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.96 E-value=4.5e-26 Score=200.51 Aligned_cols=287 Identities=15% Similarity=0.125 Sum_probs=209.6
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.|....+++.++++.|.+.+++++||++|+..++..++ ++||+|+++++.|.+.+... ......+.++..++ .
T Consensus 51 ~pt~~~L~~~lA~l~g~~~~i~~~sg~~Ai~~~l~~l~-~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd-----~ 124 (386)
T PRK08045 51 NPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFL-KPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD-----Q 124 (386)
T ss_pred CccHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHc-CCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-----C
Confidence 56789999999999998888999999999998888877 59999999999987655311 11223444555553 2
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
.|++++++.++ +++++|++++ ++||||.+++ +++|.++|+++|+++|+|++|..+.. ..++.
T Consensus 125 ~d~e~l~~~l~--------~~tklV~l~s-P~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~------~~pl~ 186 (386)
T PRK08045 125 GDEQALRAALA--------EKPKLVLVES-PSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPAL------QNPLA 186 (386)
T ss_pred CCHHHHHHhcc--------cCCeEEEEEC-CCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc------CCchh
Confidence 48999999988 7889999965 5559999988 78999999999999999999644321 12233
Q ss_pred cCccEEEEeccccCCCce---eeEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHH
Q 018240 196 QAADSASVCLSKGLGAPV---GSVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLA 271 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~~---gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 271 (359)
.++|+++.|++|+++++. +|+++. ++++.+.++......+.+. ++..+..+..+++.... ++++..+++..+.
T Consensus 187 ~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~--~p~~~~l~~rgl~tl~~-R~~~~~~na~~la 263 (386)
T PRK08045 187 LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTG--GAFDSYLLLRGLRTLVP-RMELAQRNAQAIV 263 (386)
T ss_pred hCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCC--CHHHHHHHHhhhccHHH-HHHHHHHHHHHHH
Confidence 478999999999997654 466655 6888888877777776665 66777777888876444 8889999999999
Q ss_pred HHHhcCCCce-EecCC---------------ccceEEEEEeccchHHHHHHHHHHHHhcCceeccC--------------
Q 018240 272 EGLNQLKGLR-VDVDA---------------VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE-------------- 321 (359)
Q Consensus 272 ~~l~~~~g~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~-------------- 321 (359)
+.|++.|.++ +..|. ..+..+.|.++. ......+|.+.|+--.+.+.-|
T Consensus 264 ~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~ 342 (386)
T PRK08045 264 KYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG-DEQTLRRFLGGLSLFTLAESLGGVESLISHAATMTH 342 (386)
T ss_pred HHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecC-cHHHHHHHHHhccceeEeccCCCCceeEeCCCCccc
Confidence 9999987764 33321 345677888864 2234567777775433222111
Q ss_pred -------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 322 -------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 322 -------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
..+.+|+++. + |+.+++++-|.++++++.+
T Consensus 343 ~~~~~~~~~~~gi~~~liR~svG--l--E~~~dl~~dl~~al~~~~~ 385 (386)
T PRK08045 343 AGMAPEARAAAGISETLLRISTG--I--EDGEDLIADLENGFRAANK 385 (386)
T ss_pred ccCCHHHHHhcCCCCCeEEEEeC--c--CCHHHHHHHHHHHHHHhhc
Confidence 2456999995 3 5788888888888876643
No 218
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.96 E-value=6.4e-26 Score=200.59 Aligned_cols=285 Identities=17% Similarity=0.125 Sum_probs=203.3
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeecc-ccccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYEN-GGISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~ 115 (359)
.|....+++.++++.|.+.+++++||++|+..++.+++ ++||+|+++.+.|...+.. .......|.+++.++..
T Consensus 59 ~p~~~~Le~~lA~l~g~~~~v~~~sG~~Ai~~~l~all-~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~---- 133 (405)
T PRK08776 59 NPTRDLLGEALAELEGGAGGVITATGMGAINLVLNALL-QPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLT---- 133 (405)
T ss_pred ChHHHHHHHHHHHHhCCCceEEEcCHHHHHHHHHHHHh-CCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCC----
Confidence 56678999999999999889999999999988888887 6999999999998764320 02244557677776543
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
|++++++.++ +++++|++++++ ||||.+.+ +++|.++|+++|+++|+|++|..+.. ..++.
T Consensus 134 -d~~~l~~~i~--------~~tklV~l~~P~-NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~~------~~pl~ 194 (405)
T PRK08776 134 -DPRSLADALA--------QSPKLVLIETPS-NPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPAL------QKPLE 194 (405)
T ss_pred -CHHHHHHhcC--------cCCeEEEEECCC-CCCCccCC---HHHHHHHHHHcCCEEEEECCCccccc------CCccc
Confidence 8899999987 688999997655 59999865 89999999999999999999744221 11222
Q ss_pred cCccEEEEeccccCCCce---eeEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHH
Q 018240 196 QAADSASVCLSKGLGAPV---GSVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLA 271 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~~---gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 271 (359)
.++|+++.|.+|+++++. ||+++. ++++.+++.......+.+. ++..+++...+++.... ++++..+++..+.
T Consensus 195 ~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~--s~~~a~l~~~gl~tl~~-r~~~~~~na~~la 271 (405)
T PRK08776 195 FGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTG--SPFDAFLTLRGLRTLDA-RLRVHQENADAIA 271 (405)
T ss_pred ccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCC--CHHHHHHHHhhhCcHHH-HHHHHHHHHHHHH
Confidence 378999999999998653 465555 6888888776666656543 56666666666665444 8888999999999
Q ss_pred HHHhcCCCce-EecC---------------CccceEEEEEeccchHHHHHHHHHHHHhcCceec----------cC----
Q 018240 272 EGLNQLKGLR-VDVD---------------AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVM----------PE---- 321 (359)
Q Consensus 272 ~~l~~~~g~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----------~~---- 321 (359)
+.|++.|.+. +..| ...+.++.|.+.. ......+|.+.|+--.+... |.
T Consensus 272 ~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h 350 (405)
T PRK08776 272 ALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEG-GEAAVRAFVDGLRYFTLAESLGGVESLIAHPASMTH 350 (405)
T ss_pred HHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcC-CHHHHHHHHHhCCcceEccCCCCCceEEECCccccc
Confidence 9999987664 3222 1346678888864 22345677777743222211 10
Q ss_pred -------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 322 -------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 322 -------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
..+.+|+|+. + |+.+.+++-|+++++++
T Consensus 351 ~~~~~~~~~~~gi~~~liR~svG--l--E~~~dli~dl~~al~~~ 391 (405)
T PRK08776 351 AAMTAEARAAAGISDGLLRLSVG--I--ESAEDLLIDLRAGLARA 391 (405)
T ss_pred ccCCHHHHHhcCCCCCeEEEEeC--c--CCHHHHHHHHHHHHHHh
Confidence 2346999995 3 45666666666666554
No 219
>PLN02624 ornithine-delta-aminotransferase
Probab=99.95 E-value=1.6e-25 Score=202.37 Aligned_cols=330 Identities=15% Similarity=0.131 Sum_probs=216.4
Q ss_pred cccccccCCCC----CChHHHHHHHHHcCCCCCCc---cCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018240 3 TRTVDLRSDTV----TKPTEAMRAAMASAEVDDDV---LMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~~~----~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.++|||.++.. ...+|.+.+++.+....... ....+...++.+.++++++.+..++++||++|+..+++.+..
T Consensus 75 ~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~AlklAr~ 154 (474)
T PLN02624 75 KKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMFGYDMVLPMNTGAEGVETAIKLARK 154 (474)
T ss_pred CEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhcCCCeEEEeCChHHHHHHHHHHHHH
Confidence 36789988622 34458888888875543221 123567788999999999888889999999999999997764
Q ss_pred h-------c-CC-eEEecCCCcceeeccccccccCCc------------cceeeecCCCCCCCHHHHHHHhcCCCCCccC
Q 018240 76 T-------R-GS-EVILGDNSHIHIYENGGISTIGGV------------HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVY 134 (359)
Q Consensus 76 ~-------~-g~-~vl~~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~ 134 (359)
. + ++ .|+....+|.+... ++ ....+- .+..++.+ |++.+++.+++..
T Consensus 155 ~~~~~~g~~~~~~~ii~~~~~yHG~t~-~~-~s~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~----- 222 (474)
T PLN02624 155 WGYEKKGIPKNEAIIVSCCGCFHGRTL-AA-ISMSCDNEATRGFGPLLPGHLKVDFG-----DLDALEKIFEEDG----- 222 (474)
T ss_pred HHHhhcCCCCCCcEEEEECCCcCCCCH-HH-hhcCCCccccccCCCCCCCceEeCCC-----CHHHHHHHHHhCC-----
Confidence 1 1 22 35544444333221 11 111110 11223332 7889999887321
Q ss_pred CceeEEEEeccccCCCceecChh-hHHHHHHHHHHcCcEEEEecccccchhhhcCchhH-h-hhcCccEEEEeccccCCC
Q 018240 135 PTTRLICLENTHANCGGRCLSVE-YTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR-R-LVQAADSASVCLSKGLGA 211 (359)
Q Consensus 135 ~~~~~v~i~~~~~~ptG~~~~~~-~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~-~-~~~~~d~~~~s~~K~~g~ 211 (359)
.++++|+++++.+ ++|.+++.+ ++++|.++|++||+++|+||+|.. ++..|.... . ....+|+++ ++|.+|+
T Consensus 223 ~~iaaiiiEpv~~-~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG--~GrtG~~~a~~~~~i~pDiv~--lsK~lgg 297 (474)
T PLN02624 223 DRIAAFLFEPIQG-EAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTG--LARTGKMLACDWEEVRPDVVI--LGKALGG 297 (474)
T ss_pred CCEEEEEECCccC-CCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--cCcCcchhhHHhcCCCCCEEE--ecccccC
Confidence 4688999977665 899987764 699999999999999999999852 222332221 1 112456555 4698876
Q ss_pred ce-e-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC----CC-ceEe
Q 018240 212 PV-G-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL----KG-LRVD 283 (359)
Q Consensus 212 ~~-g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~----~g-~~~~ 283 (359)
+. . |+++.++++++.+... ..+.++..+++.++++..+++...+ +..++..++.+++++.|+++ |. +...
T Consensus 298 G~~pigav~~~~~i~~~~~~~--~~~~T~~g~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~v 375 (474)
T PLN02624 298 GVIPVSAVLADKDVMLCIKPG--EHGSTFGGNPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEV 375 (474)
T ss_pred CCCcceeeeecHHHHhHhccC--CcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence 42 2 6677788877765432 2334444566777777777754432 23445556666777666653 22 2211
Q ss_pred cCCccceEEEEEeccch--HHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 284 VDAVETNIVYFEITEDS--KLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 284 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
...+.++.+.+..+. .....++.+.|.++||.+.+.+...+||+++..++++++++++++|++++++-
T Consensus 376 --rg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~~~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~ 445 (474)
T PLN02624 376 --RGRGLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPTHDTIIRLAPPLSISEDELQECSKALSDVLEHD 445 (474)
T ss_pred --EeeEEEEEEEecCCCcChHHHHHHHHHHHhCCeEEecCCCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 234555555554311 23567889999999999999888899999988999999999999999988754
No 220
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.95 E-value=6.6e-26 Score=199.16 Aligned_cols=282 Identities=21% Similarity=0.239 Sum_probs=203.0
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.|....|++.++++.|.+.+++++||++|+..++ .++ ++||+|+++++.|.+.+... ......|++++.++..
T Consensus 51 ~pt~~~le~~la~l~g~~~~~~~~sG~~ai~~~~-~ll-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~---- 124 (366)
T PRK08247 51 NPTRGVLEQAIADLEGGDQGFACSSGMAAIQLVM-SLF-RSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTA---- 124 (366)
T ss_pred CchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHH-HHh-CCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCC----
Confidence 5778999999999999999999999998887655 555 59999999999987753200 2245678888888653
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
|++++++.++ +++++|++++|. ||+|. ..++++|.++|+++|+++|+|++|..... .. ++.
T Consensus 125 -d~~~l~~~i~--------~~tklv~le~P~-NP~~~---~~dl~~I~~la~~~g~~lIvD~t~~~~~~---~~---p~~ 185 (366)
T PRK08247 125 -SLKAIEQAIT--------PNTKAIFIETPT-NPLMQ---ETDIAAIAKIAKKHGLLLIVDNTFYTPVL---QR---PLE 185 (366)
T ss_pred -CHHHHHHhcc--------cCceEEEEECCC-CCCCc---HHHHHHHHHHHHHcCCEEEEECCCccccc---cC---chh
Confidence 8999999998 789999997765 59776 45699999999999999999999632211 11 223
Q ss_pred cCccEEEEeccccCCCc---eeeEEecC-HHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHH
Q 018240 196 QAADSASVCLSKGLGAP---VGSVIVGS-KEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLA 271 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~---~gg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 271 (359)
.++|+++.|+||+++++ .+|+++.+ +++.+.++..+...+... ++..++++..+++.... ++++..+++..+.
T Consensus 186 ~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~--s~~~a~l~~~~l~tl~~-r~~~~~~~a~~l~ 262 (366)
T PRK08247 186 EGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVL--SPFDSWLLIRGMKTLAL-RMRQHEENAKAIA 262 (366)
T ss_pred cCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCC--ChHHHHHHHhccCcHHH-HHHHHHHHHHHHH
Confidence 37899999999999865 45878875 778888776766665554 45556666667765554 7778899999999
Q ss_pred HHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHh----------cCceeccC-----------------CCc
Q 018240 272 EGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEE----------HGVLVMPE-----------------SST 324 (359)
Q Consensus 272 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------~gi~~~~~-----------------~~~ 324 (359)
+.|++.|++.....|..+.++.+.+.. ......|.+.|.- +++.+.|+ +.+
T Consensus 263 ~~L~~~p~v~~v~~P~~gg~~sf~~~~--~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~ 340 (366)
T PRK08247 263 AFLNEQPGVTDVLYPGRGGMLSFRLQD--EEWVNPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEIRIANGVCNR 340 (366)
T ss_pred HHHHhCCCeeEEecCCcCcEEEEEECC--HHHHHHHHHcCCcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCC
Confidence 999999998743334355555567653 1233455554421 22232332 134
Q ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 325 RVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 325 ~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.+|+++. + |+++.+++.|.+++++
T Consensus 341 ~~R~svG--l--E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 341 LLRFSVG--I--ENVEDLIADLKQAFKQ 364 (366)
T ss_pred eEEEEec--c--CCHHHHHHHHHHHHhh
Confidence 6999985 3 5788888888888765
No 221
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.95 E-value=1.4e-25 Score=199.47 Aligned_cols=285 Identities=21% Similarity=0.249 Sum_probs=204.2
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeecccccc---ccCCccceeeecCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGIS---TIGGVHPRTVKNNQD 113 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~---~~~g~~~~~v~~~~~ 113 (359)
.|....|++.++++.|.+.+++++||++|+..++.+++ ++||+|+++.+.|...+. ... ...|+++..++..
T Consensus 57 ~pt~~~Le~~lA~l~g~~~~l~~ssG~~Ai~~al~al~-~~Gd~Vl~~~~~Y~~t~~--~~~~~l~~~gi~v~~~d~~-- 131 (425)
T PRK06084 57 NPTNDVLEQRVAALEGGVGALAVASGMAAITYAIQTIA-EAGDNIVSVAKLYGGTYN--LLAHTLPRIGIETRFAAHD-- 131 (425)
T ss_pred CchHHHHHHHHHHHhCCCceeEehhHHHHHHHHHHHHh-CCCCEEEEeCCCcchHHH--HHHHhcccceeEEEEECCC--
Confidence 57789999999999999889999999999999999888 599999999998876554 122 2246566555533
Q ss_pred CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHh
Q 018240 114 GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRR 193 (359)
Q Consensus 114 ~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~ 193 (359)
|++++++.++ +++++|++++++ ||||.+++ +++|.++|+++|+++|+|++++.+.. ..+
T Consensus 132 ---d~e~le~ai~--------~~tklV~lesp~-NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~------~~p 190 (425)
T PRK06084 132 ---DIAALEALID--------ERTKAVFCESIG-NPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL------CRP 190 (425)
T ss_pred ---CHHHHHHHhc--------cCCcEEEEeCCC-CCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc------CCh
Confidence 8999999998 688999996555 59999988 89999999999999999999754322 122
Q ss_pred hhcCccEEEEeccccCCCc---eeeEEecCHHH--HH----------------------------HHHH--HHHhhCCCc
Q 018240 194 LVQAADSASVCLSKGLGAP---VGSVIVGSKEF--IK----------------------------KARR--LRKTLGGGM 238 (359)
Q Consensus 194 ~~~~~d~~~~s~~K~~g~~---~gg~~~~~~~~--~~----------------------------~~~~--~~~~~~~~~ 238 (359)
+..++|+++.|++|+++++ .||+++.++.. .+ .... .....+.+.
T Consensus 191 ~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~ 270 (425)
T PRK06084 191 FEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGA 270 (425)
T ss_pred hhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCC
Confidence 3347999999999999765 35666653221 00 0000 011123344
Q ss_pred chhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCce-EecC---------------Cc-cceEEEEEeccchH
Q 018240 239 RQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLR-VDVD---------------AV-ETNIVYFEITEDSK 301 (359)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~---------------~~-~~~~~~~~~~~~~~ 301 (359)
.+++..++..+.+++.... ++++..+++..+.+.|++.|.+. +..| +. .+..+.|.+... .
T Consensus 271 ~l~~~~a~l~lrgl~tl~~-R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~~-~ 348 (425)
T PRK06084 271 ALSPFNAFLILQGLETLAL-RMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKGG-Q 348 (425)
T ss_pred CCCHHHHHHHHcCcCcHHH-HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecCC-H
Confidence 4577788888888887766 88999999999999999988764 3332 12 366788888642 2
Q ss_pred HHHHHHHHHHHhcCceec----------cC-----------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 302 LYAACLLKKLEEHGVLVM----------PE-----------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 302 ~~~~~~~~~l~~~gi~~~----------~~-----------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
....+|.+.|+-..+.+. |. .++.+|+++. + |+.+.+++.|++++++.
T Consensus 349 ~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svG--l--Ed~~dLi~dl~~Al~~~ 423 (425)
T PRK06084 349 AAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIG--I--EHIDDIIADLAQALDAS 423 (425)
T ss_pred HHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEec--c--CCHHHHHHHHHHHHHhh
Confidence 345677777753332221 10 2356999985 3 67888888888888765
No 222
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.95 E-value=1.4e-25 Score=185.93 Aligned_cols=309 Identities=14% Similarity=0.103 Sum_probs=221.6
Q ss_pred cCCChHHHHHHHHHHHHhCC----------CCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCc
Q 018240 34 LMHDPTAFRLETEMAKVMGK----------EAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGV 103 (359)
Q Consensus 34 ~~~~~~~~~l~~~la~~~~~----------~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~ 103 (359)
|....+...+++++|+++.. ++.++++++|.|+......+. .||+..++|.|.|+.... ...-+.|+
T Consensus 117 fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLa-dpgdafLvPtPyY~gfdr--dl~~rTgv 193 (471)
T KOG0256|consen 117 FQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLA-DPGDAFLVPTPYYPGFDR--DLRWRTGV 193 (471)
T ss_pred cccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhc-CCCceeeecCCCCCcccc--cceeccCc
Confidence 55567789999999998742 123677777778887777777 499999999999877655 33556899
Q ss_pred cceeeec--CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEeccccc
Q 018240 104 HPRTVKN--NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIF 181 (359)
Q Consensus 104 ~~~~v~~--~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~ 181 (359)
++++|.. ..+++++++.|++++++....+ .+++.|++.||.| |.|.+++.+++..+.+++.++++-+|+||.|+.
T Consensus 194 eivpv~c~Ss~~f~itv~alE~A~~~A~~~~--~kVkGvlitNPsN-PLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~ 270 (471)
T KOG0256|consen 194 EIVPVHCSSSNGFQITVEALEAALNQARKLG--LKVKGVLITNPSN-PLGTTLSPEELISLLNFASRKNIHVISDEIYAG 270 (471)
T ss_pred eEEEEEeecCCCccccHHHHHHHHHHHHHhC--CceeEEEEeCCCC-CCCCccCHHHHHHHHHHHhhcceEEEeehhhcc
Confidence 9998844 3557899999999998643333 6788999967665 999999999999999999999999999999765
Q ss_pred chhhhc-CchhHhhhc----Ccc--EEEEeccccCCCcee--eEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHH
Q 018240 182 NAAVAL-GVPVRRLVQ----AAD--SASVCLSKGLGAPVG--SVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVA 251 (359)
Q Consensus 182 ~~~~~~-~~~~~~~~~----~~d--~~~~s~~K~~g~~~g--g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (359)
..+... ..+..++.. ..| -++.|+||-||.|+- |+++. ++.+....+++..+... .+ ..+...+.+..
T Consensus 271 sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~v-Ss-~tQ~~la~LLS 348 (471)
T KOG0256|consen 271 SVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLV-SS-QTQYLLASLLS 348 (471)
T ss_pred cccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccCC-cH-HHHHHHHHHhc
Confidence 444322 234444432 233 355699999998765 87877 67777776666554332 21 22222222221
Q ss_pred ----HHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccc----hHHHHHHHHHHH-HhcCceeccCC
Q 018240 252 ----LQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITED----SKLYAACLLKKL-EEHGVLVMPES 322 (359)
Q Consensus 252 ----l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l-~~~gi~~~~~~ 322 (359)
.+.+..+...|+..+.+++.+.|+++ |+.... ...|-|+|+.+... ....-.++.+.+ .+-++.+.||.
T Consensus 349 D~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl~-s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~ 426 (471)
T KOG0256|consen 349 DEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCLK-SNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGS 426 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCceee-cCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCC
Confidence 14455557778888889999999999 998854 46889999988642 111223455555 44499998884
Q ss_pred ------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 323 ------STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 323 ------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
++|+|+||. .+.++.++-+.++|+..+...
T Consensus 427 s~~C~EpGWFRvcFA-n~~~~t~~~am~Ri~~~~~~~ 462 (471)
T KOG0256|consen 427 SCHCHEPGWFRVCFA-NMSEETLEVAMRRLKQFLDSQ 462 (471)
T ss_pred cceecCCCeEEEEec-cCCHHHHHHHHHHHHHHHHhh
Confidence 578999997 677777777999999888744
No 223
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.95 E-value=1.1e-25 Score=198.01 Aligned_cols=285 Identities=15% Similarity=0.117 Sum_probs=207.0
Q ss_pred CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCC
Q 018240 36 HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDG 114 (359)
Q Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 114 (359)
..|....+++.++++.|.+.+++++||++|+..++.+++ ++||+|+++.++|.+.+... .+....+.++..++.
T Consensus 49 ~~p~~~~le~~lA~l~g~~~v~~~~gg~~Ai~~~l~all-~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~---- 123 (382)
T TIGR02080 49 GNPTRDLLQQALAELEGGAGAVVTNTGMSAIHLVTTALL-GPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ---- 123 (382)
T ss_pred CCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHc-CCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECC----
Confidence 357789999999999998888999999999999998887 59999999999987655411 112333445544432
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh
Q 018240 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
.|++.+++.++ +++++|+++++ +||||.+++ +++|.++|+++|+++|+|++|..+... . ++
T Consensus 124 -~d~~~l~~ai~--------~~tklV~l~~p-~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~---~---pl 184 (382)
T TIGR02080 124 -GDEQALRAALA--------QKPKLVLIETP-SNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQ---N---PL 184 (382)
T ss_pred -CCHHHHHHhcC--------cCceEEEEECC-CCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccC---C---ch
Confidence 28899999998 68999999655 559999988 789999999999999999997543221 1 22
Q ss_pred hcCccEEEEeccccCCCce---eeEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHH
Q 018240 195 VQAADSASVCLSKGLGAPV---GSVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLL 270 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~~---gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 270 (359)
..++|+++.|+||+++++. +|+++. ++++.+.++..+...|... ++..++.++.+++.... ++++..+++..+
T Consensus 185 ~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~--sp~~a~l~lr~l~tl~~-R~~~~~~na~~~ 261 (382)
T TIGR02080 185 ALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTG--GAFDSYLTLRGLRTLVA-RMRLQQRNAQAI 261 (382)
T ss_pred hhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCC--CHHHHHHHHcccchHHH-HHHHHHHHHHHH
Confidence 2368999999999997643 476655 7888888887777767665 66677777777776665 788888999999
Q ss_pred HHHHhcCCCce-EecCC---------------ccceEEEEEeccchHHHHHHHHHHHHhcCceeccC-------------
Q 018240 271 AEGLNQLKGLR-VDVDA---------------VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE------------- 321 (359)
Q Consensus 271 ~~~l~~~~g~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~------------- 321 (359)
.++|++.|.++ +..|. ..+..+.|.++. ......+|.+.|+--++.+.-|
T Consensus 262 a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~ 340 (382)
T TIGR02080 262 VEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKG-GEQTVRRFLGGLSLFTLAESLGGVESLIAHPATMT 340 (382)
T ss_pred HHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecC-cHHHHHHHHHcCCcceEeccCCCCcceeECCCccC
Confidence 99999887664 33321 346678888864 2234567777774333222111
Q ss_pred --------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 322 --------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 322 --------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
..+.+|+++. + |+.+++++.|++++++
T Consensus 341 ~~~~~~~~~~~~gi~~~liRlsvG--l--E~~~dl~~dl~~al~~ 381 (382)
T TIGR02080 341 HAAMGPEARAEAGISDTLLRLSVG--L--EDADDLIADLEQGLRA 381 (382)
T ss_pred cccCCHHHHHhcCCCcCeEEEEec--c--CCHHHHHHHHHHHHhh
Confidence 2346999985 3 5788888888887763
No 224
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.95 E-value=2.2e-25 Score=197.95 Aligned_cols=288 Identities=22% Similarity=0.244 Sum_probs=206.8
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.|....|++.++++.|.+.+++++||+.|+..++.+++ ++||+|+++...|.+++... ......|++++.++ +.
T Consensus 68 ~p~~~~Le~~lA~l~g~~~av~~sSG~aAi~~al~all-~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d~--- 142 (436)
T PRK07812 68 NPTQDVVEQRIAALEGGVAALLLASGQAAETFAILNLA-GAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-DP--- 142 (436)
T ss_pred CchHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHh-CCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-CC---
Confidence 57789999999999999999999999999999998887 59999999998877655310 11334677777774 11
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
.|++.+++.++ +++++|+++++.| |+|.+.| +++|.++|+++|+++|+|++++.+.. ..++.
T Consensus 143 ~d~e~l~~ai~--------~~tklV~ie~~sN-p~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~------~~pl~ 204 (436)
T PRK07812 143 DDLDAWRAAVR--------PNTKAFFAETISN-PQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL------IRPLE 204 (436)
T ss_pred CCHHHHHHhCC--------CCCeEEEEECCCC-CCCeecC---HHHHHHHHHHcCCEEEEECCCccccc------CCchh
Confidence 28999999888 7899999988777 9999988 89999999999999999998643221 22233
Q ss_pred cCccEEEEeccccCCCce---eeEEecCHH------------------------------HHHHHH-HHHHhhCCCcchh
Q 018240 196 QAADSASVCLSKGLGAPV---GSVIVGSKE------------------------------FIKKAR-RLRKTLGGGMRQV 241 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~~---gg~~~~~~~------------------------------~~~~~~-~~~~~~~~~~~~~ 241 (359)
.++|+++.|+||++|+.. ||+++.+.. ++.+.+ ......|... +
T Consensus 205 ~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l--~ 282 (436)
T PRK07812 205 HGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAI--S 282 (436)
T ss_pred cCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCC--C
Confidence 489999999999998653 355554321 111111 1223344444 6
Q ss_pred HHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCce-EecC----------------CccceEEEEEeccchHHHH
Q 018240 242 GVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLR-VDVD----------------AVETNIVYFEITEDSKLYA 304 (359)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~----------------~~~~~~~~~~~~~~~~~~~ 304 (359)
+..++..+.+++.... ++++..+++..+.+.|++.|+++ +..| ...+..+.|.+.. .....
T Consensus 283 p~~a~l~~rgl~tL~~-R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~-~~~~~ 360 (436)
T PRK07812 283 PFNAFLIAQGLETLSL-RIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAG-GVEAG 360 (436)
T ss_pred HHHHHHHhcCcCcHHH-HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecC-CHHHH
Confidence 6777777777777665 88999999999999999988764 3332 1246678888864 22356
Q ss_pred HHHHHHHHhcCceec----------cC-----------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 305 ACLLKKLEEHGVLVM----------PE-----------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 305 ~~~~~~l~~~gi~~~----------~~-----------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
..|.+.|+--.+... |. ..+.+|+++. + |+.+.+++.|.+++++.++
T Consensus 361 ~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvG--l--Ed~~dli~dl~~Al~~~~~ 434 (436)
T PRK07812 361 KAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVG--I--EGIDDILADLEAGFAAAKA 434 (436)
T ss_pred HHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEec--c--CCHHHHHHHHHHHHHhhhc
Confidence 677777743322221 11 2346999985 3 6788888888888887653
No 225
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.95 E-value=1.5e-25 Score=198.35 Aligned_cols=326 Identities=16% Similarity=0.105 Sum_probs=224.8
Q ss_pred CCChHHHHHHHHHcCCCCC-CccCC----ChHHHHHHHHHHHHhCCC-C---e--EEcCCchHHHHHHHHHhhhh-----
Q 018240 13 VTKPTEAMRAAMASAEVDD-DVLMH----DPTAFRLETEMAKVMGKE-A---G--LFVPSGTMGNLISVLVHCET----- 76 (359)
Q Consensus 13 ~~~~~~~~~~a~~~~~~~~-~~~~~----~~~~~~l~~~la~~~~~~-~---~--~~~~~gt~a~~~~l~~~~~~----- 76 (359)
.+++.|++.+.+....... ..+.. .+...++++.+++++|.+ . . .++++||+|+..++.++..+
T Consensus 50 tt~~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~ 129 (431)
T TIGR01788 50 TTWMEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRM 129 (431)
T ss_pred CCCCCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHH
Confidence 4566687888776644211 11111 244567777789999987 2 2 44799999999998776421
Q ss_pred --c-----CCeEEecCCCcceeeccccccccCCccceeeecCCC-CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccC
Q 018240 77 --R-----GSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQD-GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHAN 148 (359)
Q Consensus 77 --~-----g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ 148 (359)
. ...|+++...|++..+ + ++..|++++.++.+.+ +.+|+++|++.++ +++.+|.+ +..+|
T Consensus 130 ~~~g~~~~~~~ii~s~~~H~sv~k-a--~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~--------~~t~lV~~-t~g~t 197 (431)
T TIGR01788 130 EAAGKPTDKPNLVMGSNVQVCWEK-F--ARYFDVELREVPMDPGRYVIDPEQVVEAVD--------ENTIGVVC-ILGTT 197 (431)
T ss_pred HhcCCCCCCcEEEEcCcchHHHHH-H--HHHcCceeEEEecCCCceeeCHHHHHHHHh--------hCCeEEEE-EeCCC
Confidence 1 1369999999999876 3 5667888888888765 5899999999998 67778777 55666
Q ss_pred CCceecChhhHHHHHHHHHHc------CcEEEEecccccchhhhc-CchhHhh-hcCccEEEEeccccCCCcee-eEEec
Q 018240 149 CGGRCLSVEYTDSVGEIAKKH------GLKLHIDGARIFNAAVAL-GVPVRRL-VQAADSASVCLSKGLGAPVG-SVIVG 219 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~------~~~li~D~a~~~~~~~~~-~~~~~~~-~~~~d~~~~s~~K~~g~~~g-g~~~~ 219 (359)
.||.+-| +++|.++|+++ |+++++|.+|+.+..+.. +.....+ ..++|.+++|.||++.+|.| |+++.
T Consensus 198 ~tG~idp---i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G~l~~ 274 (431)
T TIGR01788 198 YTGEYED---VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVGWVIW 274 (431)
T ss_pred CCcccCC---HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcEEEEE
Confidence 9999877 89999999999 999999999865443221 1111111 24789999999999867887 77776
Q ss_pred CHH--HHHHHHHHHHhhCCC-------cchhHHHHHHHHHHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCC
Q 018240 220 SKE--FIKKARRLRKTLGGG-------MRQVGVLCAAALVAL----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDA 286 (359)
Q Consensus 220 ~~~--~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~ 286 (359)
++. +.+.+.....+.+.. .+..+......+..+ ....++..++..++++++.+.|++.|++++..+.
T Consensus 275 r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~ 354 (431)
T TIGR01788 275 RDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDG 354 (431)
T ss_pred eChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCC
Confidence 433 222221111111111 111111111222232 2445557788889999999999999889987542
Q ss_pred ccceEEEEEeccc--hHHHHHHHHHHHHhcCcee----cc---CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 287 VETNIVYFEITED--SKLYAACLLKKLEEHGVLV----MP---ESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 287 ~~~~~~~~~~~~~--~~~~~~~~~~~l~~~gi~~----~~---~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
...+++.|++... ...+..++.+.|.++|+.+ .| .+...+|+++.+..+.+.++.+++.|..++.++
T Consensus 355 ~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 355 SGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 4788888888641 1246678999999999874 22 245679999988899999999999999988765
No 226
>PRK07505 hypothetical protein; Provisional
Probab=99.95 E-value=9e-26 Score=201.71 Aligned_cols=322 Identities=17% Similarity=0.151 Sum_probs=201.4
Q ss_pred cccccccCCCCCC--hHHHHHHHHHcCCCCC---Ccc-----CCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSDTVTK--PTEAMRAAMASAEVDD---DVL-----MHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~~~~--~~~~~~~a~~~~~~~~---~~~-----~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~ 72 (359)
..++||.+.++.+ -+|++.+++.+..... ... ...+...++++.++++++. ..+++++|++|+..++..
T Consensus 46 ~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~~~~~~sG~~a~~~ai~~ 124 (402)
T PRK07505 46 HTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA-SVLTFTSCSAAHLGILPL 124 (402)
T ss_pred ceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CEEEECChHHHHHHHHHH
Confidence 3579998866553 3488888888754321 111 1245678999999999998 778889999999988876
Q ss_pred hhh-----hcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEecccc
Q 018240 73 HCE-----TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHA 147 (359)
Q Consensus 73 ~~~-----~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~ 147 (359)
+.. .+++.|+.....|.+...... ....+.+++.++.+ |++.+++.++ ++++++++.++.
T Consensus 125 ~~~~~~~~~~~~vi~~~~~~H~s~~~~~~-~~~~~~~v~~~~~~-----d~~~l~~~~~--------~~~~~~vl~~p~- 189 (402)
T PRK07505 125 LASGHLTGGVPPHMVFDKNAHASLNILKG-ICADETEVETIDHN-----DLDALEDICK--------TNKTVAYVADGV- 189 (402)
T ss_pred HHhcccCCCCCCEEEEchhhhHhHHhhhh-hhhcCCeEEEeCCC-----CHHHHHHHHh--------cCCCEEEEEecc-
Confidence 542 122234445566665421011 22234566777664 8999999887 455677775554
Q ss_pred CCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh--Hhhhc-Ccc--EEEEeccccCCCceeeEEe-cCH
Q 018240 148 NCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV--RRLVQ-AAD--SASVCLSKGLGAPVGSVIV-GSK 221 (359)
Q Consensus 148 ~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~-~~d--~~~~s~~K~~g~~~gg~~~-~~~ 221 (359)
||+|.+.+ +++|.++|+++|+++|+||+|+++.+...+... ..+.. ..| +++.|++|.++++ ||+++ .++
T Consensus 190 ~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~-Gg~~~~~~~ 265 (402)
T PRK07505 190 YSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS-GGVIMLGDA 265 (402)
T ss_pred cccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc-CeEEEeCCH
Confidence 59999988 799999999999999999998655443333221 12221 234 4455999999864 56655 578
Q ss_pred HHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH----HHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEec
Q 018240 222 EFIKKARRLRKTLGGGMRQVGVLCAAALVALQENV----LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEIT 297 (359)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~ 297 (359)
++.+.++.....+..+.+.+...++++..+++... .+..++..++...+.+.+... . ......+.++.+.
T Consensus 266 ~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~--~g~~~~i~~~~~~ 339 (402)
T PRK07505 266 EQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE----Q--SGSFLPIRLIYIG 339 (402)
T ss_pred HHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc----C--CCCCCCEEEEEeC
Confidence 88888765443332222233345555555554221 112222333332222221110 1 1112233334433
Q ss_pred cchHHHHHHHHHHHHhcCceeccC-------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 298 EDSKLYAACLLKKLEEHGVLVMPE-------SSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 298 ~~~~~~~~~~~~~l~~~gi~~~~~-------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
. .....++.+.|.++||.+.+. +..++|++++..++++++++++++|++++++
T Consensus 340 ~--~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 340 D--EDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred C--HHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 2 235678999999999998553 3368999998889999999999999988754
No 227
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.95 E-value=3.3e-25 Score=197.10 Aligned_cols=287 Identities=20% Similarity=0.202 Sum_probs=205.3
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.|...++|+.++++.|.+++++++||++|+..++.+++ ++||+|+++...|.++.... ......|++++.++.+
T Consensus 63 ~p~~~~le~~lA~l~g~~~av~~sSGt~Al~~al~~ll-~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~---- 137 (433)
T PRK08134 63 NPTVAVLEERVAALEGGVGAIATASGQAALHLAIATLM-GAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPG---- 137 (433)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHh-CCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC----
Confidence 67889999999999999999999999999999999886 69999999999987654310 0124478888888764
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
|++++++.++ ++|++|+++++ +||+|.+.+ +++|.++|+++|+++|+|++++.+.. .. ++.
T Consensus 138 -d~~~l~~~i~--------~~TklV~~e~~-~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~---~~---pl~ 198 (433)
T PRK08134 138 -DIDGWRAAIR--------PNTRLLFGETL-GNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL---LR---PFE 198 (433)
T ss_pred -CHHHHHHhcC--------CCCeEEEEECC-CcccCcccC---HHHHHHHHHHcCCEEEEECCCccccc---CC---chh
Confidence 8999999999 78999999876 569999988 89999999999999999999754332 11 223
Q ss_pred cCccEEEEeccccCCCce---eeEEecCHH--------------------------------HHHHHH-HHHHhhCCCcc
Q 018240 196 QAADSASVCLSKGLGAPV---GSVIVGSKE--------------------------------FIKKAR-RLRKTLGGGMR 239 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~~---gg~~~~~~~--------------------------------~~~~~~-~~~~~~~~~~~ 239 (359)
.++|++++|.||++|++. ||+++.... +..+.+ ......|..
T Consensus 199 ~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~-- 276 (433)
T PRK08134 199 HGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGAC-- 276 (433)
T ss_pred cCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCC--
Confidence 489999999999998653 455542111 001111 011223333
Q ss_pred hhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCce-EecC----------------CccceEEEEEeccchHH
Q 018240 240 QVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLR-VDVD----------------AVETNIVYFEITEDSKL 302 (359)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~----------------~~~~~~~~~~~~~~~~~ 302 (359)
.++..++....+++.... ++++..+++..+.+.|++.|.+. +..| ...+.++.|.+.. ...
T Consensus 277 ls~~~A~l~~~gL~tl~~-R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~~-~~~ 354 (433)
T PRK08134 277 LSPMNAWQLLQGIETLPL-RMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGSVFSFDLKG-GRA 354 (433)
T ss_pred CCHHHHHHHhcCCCcHHH-HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEecC-CHH
Confidence 466677777777777655 88899999999999999987653 2222 1246677888864 223
Q ss_pred HHHHHHHHHHhcCcee----------ccC-----------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 303 YAACLLKKLEEHGVLV----------MPE-----------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~----------~~~-----------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
...+|.+.|+--.+.. .|. ..+.||+++. + |+.+++++.|.+++++..+
T Consensus 355 ~~~~f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvG--l--E~~~dli~dl~~Al~~~~~ 430 (433)
T PRK08134 355 AGRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIG--L--EDADDLIDDLKRALKAAEK 430 (433)
T ss_pred HHHHHHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCeEEEEec--c--CCHHHHHHHHHHHHHhhhh
Confidence 5667777774322221 111 2346999995 3 5788888888888877543
No 228
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.95 E-value=1.7e-25 Score=196.95 Aligned_cols=283 Identities=20% Similarity=0.222 Sum_probs=207.8
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.|...++++.+++++|.+.++++++|+.|+..++. ++ ++||+|+++.+.|.+..... ..+...|++++.++..
T Consensus 46 ~p~~~~le~~la~l~g~~~~l~~~sG~~al~~~l~-ll-~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~---- 119 (378)
T TIGR01329 46 NPTRTALESLLAKLDKADRAFAFSSGMAALDVITR-LL-NNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTT---- 119 (378)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-Hh-CCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCC----
Confidence 56789999999999999888999999988776554 55 69999999999887654300 1234578888888754
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
|++++++.++ +++++|+++++.| |+|.+.+ +++|.++|+++|+++|+|+++..+.. ..++.
T Consensus 120 -d~~~le~~i~--------~~tklv~le~psn-ptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~~------~~~l~ 180 (378)
T TIGR01329 120 -DLDKVKAALG--------PKTKLVLLESPTN-PLQKIVD---IRKISEMAHAQNALVVVDNTMMSPLL------CNPLE 180 (378)
T ss_pred -CHHHHHHhcC--------cCceEEEEECCCC-CCCeeec---HHHHHHHHHHcCCEEEEECCCccccc------CChhh
Confidence 8999999998 7899999977665 9999887 89999999999999999999633211 12223
Q ss_pred cCccEEEEeccccCCCce---eeEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHH
Q 018240 196 QAADSASVCLSKGLGAPV---GSVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLA 271 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~~---gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 271 (359)
.++|+++.|++|+++++. +|+++. ++++.++++..+...|... ++..++.....++.... ++++..+++..+.
T Consensus 181 ~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~--~~~~a~l~~~~l~tl~~-R~e~~~~na~~la 257 (378)
T TIGR01329 181 LGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGL--APFDCWLLLRGIKTLAI-RIEKQQENARAIA 257 (378)
T ss_pred cCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcC--CHHHHHHHHccCCCHHH-HHHHHHHHHHHHH
Confidence 378999999999997653 577766 5666677776666555544 44455555555555544 8888899999999
Q ss_pred HHHhcCCCce-EecC---------------CccceEEEEEeccchHHHHHHHHHHHHhcCceeccC--------------
Q 018240 272 EGLNQLKGLR-VDVD---------------AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE-------------- 321 (359)
Q Consensus 272 ~~l~~~~g~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~-------------- 321 (359)
+.|++.|.+. +..+ ...+.++.|.+.. ...+.+|.+.|+..++.+..|
T Consensus 258 ~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~--~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~ 335 (378)
T TIGR01329 258 MFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS--VALSKRLVEATKLFSITVSFGSVNSLISMPCFMSH 335 (378)
T ss_pred HHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC--HHHHHHHHHhCcCcccccCCCCCCceeeCCCcccc
Confidence 9999876552 2221 1245678888843 224789999997777665322
Q ss_pred -------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 322 -------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 322 -------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.++.+|+++. + |+.+++++-|++++++.
T Consensus 336 ~~~~~~~~~~~gi~~~liR~svG--l--E~~~dl~~dl~~al~~~ 376 (378)
T TIGR01329 336 ASIPAEVREERGLPEDLVRLSVG--I--EDVDDLISDLDIAFVTA 376 (378)
T ss_pred ccCCHHHHHhcCCCCCeEEEEec--c--CCHHHHHHHHHHHHHhc
Confidence 1346999984 3 57888888888888754
No 229
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.95 E-value=1.9e-25 Score=201.65 Aligned_cols=318 Identities=16% Similarity=0.131 Sum_probs=209.8
Q ss_pred HHHHHHHHHcCCCCCC--------ccCCChHHHH----HHHHHHHHhCCCCe-E-E---cCCchHHHHHHHHHhhhhcCC
Q 018240 17 TEAMRAAMASAEVDDD--------VLMHDPTAFR----LETEMAKVMGKEAG-L-F---VPSGTMGNLISVLVHCETRGS 79 (359)
Q Consensus 17 ~~~~~~a~~~~~~~~~--------~~~~~~~~~~----l~~~la~~~~~~~~-~-~---~~~gt~a~~~~l~~~~~~~g~ 79 (359)
+|.+++++.....+.. .+........ .++.++++||.+.. + + ++||++++..++.++. ++||
T Consensus 47 s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~-~~gd 125 (452)
T PTZ00094 47 SRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALL-QPHD 125 (452)
T ss_pred CHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhc-CCCC
Confidence 4677777776443221 1222333344 44689999998753 2 3 3689999999999997 5999
Q ss_pred eEEecCCCcceeeccccccc-----cC--CccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018240 80 EVILGDNSHIHIYENGGIST-----IG--GVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~-----~~--g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
+|+++...|.+....+.... .. +.++..++.+.+|.+|+++|++.+++ .+++++++. .+ .+|.
T Consensus 126 ~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~-------~~~~lvi~~--~s-~~g~ 195 (452)
T PTZ00094 126 RIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKA-------FRPKLIIAG--AS-AYPR 195 (452)
T ss_pred EEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHH-------hCCCEEEEe--CC-CCCC
Confidence 99999998877664210000 01 12334455566789999999999973 356666662 23 3788
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHH
Q 018240 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRK 232 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~ 232 (359)
..| +++|.++|+++|+++++|++|+.|..+..... .++ .++|++++|+||||++|.||+++.++++.+.+.....
T Consensus 196 ~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~-~~~-~~~D~l~~S~hK~l~GP~Gg~l~~~~~~~~~l~~~~~ 270 (452)
T PTZ00094 196 DID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLP-SPF-PYADVVTTTTHKSLRGPRSGLIFYRKKVKPDIENKIN 270 (452)
T ss_pred ccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCC-CCC-CCCcEEEcCCccCCCCCCceEEEEecccchHHHHhhc
Confidence 777 78999999999999999999988877532211 122 2799999999999988888877776655443322111
Q ss_pred -hhCCCc--chhHHHHHHHHHHHHH----hHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHH
Q 018240 233 -TLGGGM--RQVGVLCAAALVALQE----NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAA 305 (359)
Q Consensus 233 -~~~~~~--~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (359)
.....+ .......++...+++. ..+...++..+++++|.+.|++. |+++..+........+.+.. .+.+..
T Consensus 271 ~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~~-~~~~~~ 348 (452)
T PTZ00094 271 EAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GYDLVTGGTDNHLVLVDLRP-FGITGS 348 (452)
T ss_pred cccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCCCceEeecCCc-CCCCHH
Confidence 111110 1122223333334432 23346677888999999999887 88875432223445555543 235777
Q ss_pred HHHHHHHhcCceec----cC-----CCcEEEEEeCCCCC----HHHHHHHHHHHHHHHHH
Q 018240 306 CLLKKLEEHGVLVM----PE-----SSTRVRIVVHHQIS----ANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 306 ~~~~~l~~~gi~~~----~~-----~~~~lRi~~~~~~~----~~~i~~~~~~l~~~~~~ 352 (359)
.+...|.++||.+. |. .+.++|++++..++ ++|++++++.|.++++.
T Consensus 349 ~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 349 KMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred HHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 88899988999983 22 23689999965554 99999999999999875
No 230
>PRK05939 hypothetical protein; Provisional
Probab=99.95 E-value=2.7e-25 Score=196.11 Aligned_cols=283 Identities=18% Similarity=0.215 Sum_probs=200.1
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTM 116 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 116 (359)
.|....+|+.++++.|.+.++++++|+.|+..++.+++ ++||+|+++++.|.++..........|++++.++..
T Consensus 46 ~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all-~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~----- 119 (397)
T PRK05939 46 TPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLL-RAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT----- 119 (397)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHc-CCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-----
Confidence 67889999999999999999999999999999998887 599999999998765432111245678888888754
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhc
Q 018240 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQ 196 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 196 (359)
|++++++.++ +++++|++++++ ||||.+.+ +++|.++|+++|+++|+|++++.+.. ..+...
T Consensus 120 d~e~l~~~l~--------~~tklV~vesp~-NptG~v~d---l~~I~~la~~~gi~livD~t~a~~~~------~~~~~~ 181 (397)
T PRK05939 120 DVQNVAAAIR--------PNTRMVFVETIA-NPGTQVAD---LAGIGALCRERGLLYVVDNTMTSPWL------FRPKDV 181 (397)
T ss_pred CHHHHHHhCC--------CCCeEEEEECCC-CCCCCHHh---HHHHHHHHHHcCCEEEEECCcccccc------cCcccc
Confidence 8999999998 789999997655 59999755 89999999999999999998643321 122223
Q ss_pred CccEEEEeccccCCCce---eeEEecCHH--------H-------------HHHHH-HHHHhhCCCcchhHHHHHHHHHH
Q 018240 197 AADSASVCLSKGLGAPV---GSVIVGSKE--------F-------------IKKAR-RLRKTLGGGMRQVGVLCAAALVA 251 (359)
Q Consensus 197 ~~d~~~~s~~K~~g~~~---gg~~~~~~~--------~-------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 251 (359)
++|+++.|+||++++.. ||+++.+.. + +..++ ......|... ++..++....+
T Consensus 182 gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~--~p~~a~l~~rg 259 (397)
T PRK05939 182 GASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATL--SSEAAHRIAIG 259 (397)
T ss_pred CCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCC--CHHHHHHHHcC
Confidence 78999999999998643 354443221 1 11111 1112345444 55666666777
Q ss_pred HHHhHHHHhhhHHHHHHHHHHHHhcCCCce-EecCC---------------ccceEEEEEeccchHHHHHHHHHHHHh--
Q 018240 252 LQENVLVMLDGDHKKAKLLAEGLNQLKGLR-VDVDA---------------VETNIVYFEITEDSKLYAACLLKKLEE-- 313 (359)
Q Consensus 252 l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~-- 313 (359)
++.... ++++..+++..+.+.|++.|.+. +..|. ..+.++.|.+... .....|.+.|+-
T Consensus 260 l~tl~~-R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~--~~~~~f~~~l~l~~ 336 (397)
T PRK05939 260 AETLAL-RVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADG--IDCFDFLNRLKLVI 336 (397)
T ss_pred cCcHHH-HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCH--HHHHHHHHhCCcce
Confidence 777655 88888899999999999987664 33321 3466788888752 255667776642
Q ss_pred cCcee--------ccC-----------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 314 HGVLV--------MPE-----------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 314 ~gi~~--------~~~-----------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.+... .|. .++.+|+++. + |+++++++.|.+++++
T Consensus 337 ~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svG--l--Ed~~dLi~dl~~Al~~ 396 (397)
T PRK05939 337 KATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVG--I--EDEADLIADFEQALDA 396 (397)
T ss_pred EccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeC--C--CCHHHHHHHHHHHHhc
Confidence 22111 010 2356999995 3 5788888888887753
No 231
>PRK07049 methionine gamma-lyase; Validated
Probab=99.95 E-value=2.4e-25 Score=198.27 Aligned_cols=293 Identities=18% Similarity=0.197 Sum_probs=207.5
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.|....|++.++++.+.+.+++++||++|+..++.+++ ++||+|+++.|.|..+.... ......|++++.++..
T Consensus 82 ~Pt~~~Le~~lA~leg~~~~iv~~sG~~Ai~~~l~al~-~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~---- 156 (427)
T PRK07049 82 HPNSEIVEDRLAVYEGAESAALFSSGMSAIATTLLAFV-RPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADG---- 156 (427)
T ss_pred CcCHHHHHHHHHHHhCCCcEEEEccHHHHHHHHHHHHh-CCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCC----
Confidence 57789999999999999999999999999888888888 59999999999987764310 1134568776666421
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHH---cCcEEEEecccccchhhhcCchhH
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKK---HGLKLHIDGARIFNAAVALGVPVR 192 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~---~~~~li~D~a~~~~~~~~~~~~~~ 192 (359)
.|.+.+++.+++.... +++++|++++ ++||||.+++.+++.+|++.|++ +++++|+|+++... .. ..
T Consensus 157 ~d~~~l~~~l~~~~~~---~~tklv~les-P~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~-~~-----~~ 226 (427)
T PRK07049 157 LSEAAIGAAAEAAAAK---GRVSLILIET-PANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGP-VF-----QK 226 (427)
T ss_pred CCHHHHHHHHHhhccC---CCceEEEEEC-CCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccc-cc-----CC
Confidence 3677787777521100 4789999975 55599999997777777766543 79999999984221 11 11
Q ss_pred hhhcCccEEEEeccccCCCc---eeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHH
Q 018240 193 RLVQAADSASVCLSKGLGAP---VGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKL 269 (359)
Q Consensus 193 ~~~~~~d~~~~s~~K~~g~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 269 (359)
++..++|+++.|+||++|+. .+|++++++++.+.++..+..++.+. ++..+.++..+++.... ++++..+++..
T Consensus 227 pl~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~g~~l--s~~~a~l~~r~L~tl~~-R~~~~~~~a~~ 303 (427)
T PRK07049 227 PLEHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAIGTQL--DPHSCWMLGRSLETLVL-RMERANRNARA 303 (427)
T ss_pred ccccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhcCCCC--CHHHHHHHHcCCChHHH-HHHHHHHHHHH
Confidence 22336788889999999852 34889999999999888777776555 55666677777776554 77788999999
Q ss_pred HHHHHhcCCCce-EecCC-----------------ccceEEEEEeccchHHHHHHHHHHHHhcCceec----------cC
Q 018240 270 LAEGLNQLKGLR-VDVDA-----------------VETNIVYFEITEDSKLYAACLLKKLEEHGVLVM----------PE 321 (359)
Q Consensus 270 l~~~l~~~~g~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----------~~ 321 (359)
+.+.|++.|++. +..|+ ..+..+.|.+.. ......+|.+.|+--.+.+. |.
T Consensus 304 la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~f~~~l~l~~~~~slG~~~sli~~~~ 382 (427)
T PRK07049 304 VAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKG-GQAAAFRFLNALQIFKLAVSLGGTESLASHPA 382 (427)
T ss_pred HHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcC-CHHHHHHHHHcCcccEEcccCCCCCceeeCCC
Confidence 999999988774 33331 235567788764 22346677777743332221 10
Q ss_pred -----------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 322 -----------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 322 -----------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
..+.||+++. + |+.+++++.|.+++++
T Consensus 383 ~~~h~~~~~~~~~~~gi~~~liR~svG--l--E~~~dl~~dl~~al~~ 426 (427)
T PRK07049 383 SMTHSGVPADVRERIGVLESTIRLSIG--I--EHPDDLIADLAQALDA 426 (427)
T ss_pred ccccccCCHHHHHhcCCCcCeEEEEeC--c--CCHHHHHHHHHHHHhc
Confidence 2346999985 3 5788888888887753
No 232
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.95 E-value=2.5e-25 Score=194.26 Aligned_cols=279 Identities=16% Similarity=0.156 Sum_probs=200.1
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTM 116 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 116 (359)
.|...+||+.++++.+.+++++++||++|+..++ .++ ++||+|+++.+.|..... .+.......-+.+ ++..
T Consensus 53 ~p~~~~le~~lA~leg~~~~v~~~sG~aAi~~~l-~~l-~~GD~VI~~~~~yg~~~~--~~~~~~~~~~~~~----~~~~ 124 (364)
T PRK07269 53 NPTRAKLEETLAAIESADYALATSSGMSAIVLAF-SVF-PVGSKVVAVRDLYGGSFR--WFNQQEKEGRFHF----TYAN 124 (364)
T ss_pred CccHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHH-HHh-CCCCEEEEecCCcCchHH--HHHHHHhcCcEEE----EecC
Confidence 6778999999999999999999999999999888 455 599999999988755432 1011100000111 1224
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhc
Q 018240 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQ 196 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 196 (359)
|++++++.++ +++++|++++|.| |||.+.+ +++|+++|+++|+++|+|+++... ... .++..
T Consensus 125 d~~~l~~~i~--------~~TklV~lesP~N-Ptg~~~d---i~~I~~la~~~gi~vvvD~t~~~~---~~~---~pl~~ 186 (364)
T PRK07269 125 TEEELIAAIE--------EDTDIVYIETPTN-PLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSP---IYQ---RPIEL 186 (364)
T ss_pred CHHHHHHhcC--------cCceEEEEECCCC-CCCeeeC---HHHHHHHHHHcCCEEEEECCCccc---ccC---Cchhh
Confidence 8999999998 7899999966655 9999876 899999999999999999985221 112 22345
Q ss_pred CccEEEEeccccCCCce---eeEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHH
Q 018240 197 AADSASVCLSKGLGAPV---GSVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAE 272 (359)
Q Consensus 197 ~~d~~~~s~~K~~g~~~---gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 272 (359)
++|++++|++|+++++. ||+++. ++++.++++..+...|... ++..++.+..+++.... ++++..+++..+.+
T Consensus 187 gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~--s~~~a~l~~~~L~tL~~-r~~~~~~na~~~a~ 263 (364)
T PRK07269 187 GADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVL--SPFDSYLLMRGLKTLSL-RMERSTANAQEVVA 263 (364)
T ss_pred CCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCC--CHHHHHHHHcCCCcHHH-HHHHHHHHHHHHHH
Confidence 89999999999998643 677666 6778888776655555444 67777788888877544 88899999999999
Q ss_pred HHhcCCCce-EecCCccceEEEEEeccchHHHHHHHHHHHHhc----------CceeccC-----------------CCc
Q 018240 273 GLNQLKGLR-VDVDAVETNIVYFEITEDSKLYAACLLKKLEEH----------GVLVMPE-----------------SST 324 (359)
Q Consensus 273 ~l~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------gi~~~~~-----------------~~~ 324 (359)
+|++.|.+. +..| +.+..+.|.+.. ......|.+.|.-. ++.+.|. .++
T Consensus 264 ~L~~~p~v~~v~yp-g~gg~~sf~~~~--~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~ 340 (364)
T PRK07269 264 FLKKSPAVKEVLYT-GKGGMISFKVAD--ETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDD 340 (364)
T ss_pred HHHhCCCccEEeCC-CcCcEEEEEECC--HHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCC
Confidence 999998875 4444 467777777753 23455666665322 2222221 234
Q ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 325 RVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 325 ~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.+|+++. + |+.+.+++-|.++++
T Consensus 341 liRlsvG--l--E~~~dli~dl~~al~ 363 (364)
T PRK07269 341 LLRLSIG--I--EDARDLIADLKQALE 363 (364)
T ss_pred eEEEEec--c--CCHHHHHHHHHHHhc
Confidence 6999985 3 578888888887764
No 233
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.95 E-value=5.2e-25 Score=192.32 Aligned_cols=287 Identities=18% Similarity=0.130 Sum_probs=211.3
Q ss_pred CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCC
Q 018240 36 HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDG 114 (359)
Q Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 114 (359)
..|....+++.++.+-+.+.+++++||+.|+..++.+++ ++||+|+++++.|++..... ...+..|+++..++.+
T Consensus 62 gnPt~~~Le~~la~le~~~~~v~~sSG~aAi~~~l~all-~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~--- 137 (395)
T PRK05967 62 GTPTTDALCKAIDALEGSAGTILVPSGLAAVTVPFLGFL-SPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE--- 137 (395)
T ss_pred CChHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHhc-CCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC---
Confidence 367788999999999988888999999999999998888 59999999999988865300 2356778888888543
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh
Q 018240 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
+.+.+++.++ +++++|+++++.| |++.. .++++|+++|+++|+++|+|+++.. +....++
T Consensus 138 --~~e~l~~al~--------~~TklV~lesPsN-P~l~v---~dl~~I~~la~~~g~~vvVD~t~a~------p~~~~pl 197 (395)
T PRK05967 138 --IGAGIAKLMR--------PNTKVVHTEAPGS-NTFEM---QDIPAIAEAAHRHGAIVMMDNTWAT------PLYFRPL 197 (395)
T ss_pred --CHHHHHHhcC--------cCceEEEEECCCC-CCCcH---HHHHHHHHHHHHhCCEEEEECCccC------ceecChh
Confidence 4577999998 7899999977665 87764 4599999999999999999998532 2223444
Q ss_pred hcCccEEEEeccccCCCc---eeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHH
Q 018240 195 VQAADSASVCLSKGLGAP---VGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLA 271 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 271 (359)
..++|+++.|.+|++++- .+|+++.+++..+++.......|... ++..++....+++...- ++++..+++..+.
T Consensus 198 ~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~--~p~da~l~~rgl~Tl~l-R~~~~~~na~~lA 274 (395)
T PRK05967 198 DFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCA--GPDDTYQILRGLRTMGI-RLEHHRKSALEIA 274 (395)
T ss_pred HcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCC--CHHHHHHHHcCcccHHH-HHHHHHHHHHHHH
Confidence 458999999999998753 34778888877777765556666655 56667777777777655 8889999999999
Q ss_pred HHHhcCCCce-EecCC---------------ccceEEEEEeccc---hHHHHHHHHHHHHhcCceeccC-----------
Q 018240 272 EGLNQLKGLR-VDVDA---------------VETNIVYFEITED---SKLYAACLLKKLEEHGVLVMPE----------- 321 (359)
Q Consensus 272 ~~l~~~~g~~-~~~~~---------------~~~~~~~~~~~~~---~~~~~~~~~~~l~~~gi~~~~~----------- 321 (359)
+.|++.|.++ +..|. ..+..+.|.++.. ....+.+|.+.|+-..+.+.-|
T Consensus 275 ~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sLi~~~~~ 354 (395)
T PRK05967 275 RWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALEIFGLGYSWGGYESLALHVKL 354 (395)
T ss_pred HHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCCcceEccCCCCcceeeeeCCC
Confidence 9999987763 43331 3466788888632 1234567777764322222111
Q ss_pred ----------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 322 ----------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 322 ----------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.++.+|+++. + |+.+.+++-|.++++..
T Consensus 355 ~~~~~~~~~~~~~liRlSvG--l--Ed~~dLi~Dl~~Al~~~ 392 (395)
T PRK05967 355 GDRTVAKAPYAGPVIRLQIG--L--EDVPDLKADLERGFAAA 392 (395)
T ss_pred ChhHhhhccCCCCeEEEEec--c--CCHHHHHHHHHHHHHhh
Confidence 1246999985 3 57888888888887765
No 234
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.95 E-value=3.4e-25 Score=194.76 Aligned_cols=283 Identities=20% Similarity=0.239 Sum_probs=202.7
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.|....|++.++++.|.+.+++++||+.|+..++ .++ ++||+|+++++.|.+.+... ......|+++..++..
T Consensus 49 ~p~~~~Le~~la~l~g~~~al~~~SG~~Al~~~l-~~l-~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~---- 122 (380)
T PRK06176 49 NPTRFALEELIADLEGGVKGFAFASGLAGIHAVF-SLF-QSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTS---- 122 (380)
T ss_pred ChhHHHHHHHHHHHhCCCCEEEECCHHHHHHHHH-HHc-CCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCC----
Confidence 5778999999999999999999999999887555 566 59999999999886654300 1245567777777543
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
|++++++.++ +++++|+++++. ||+|.+.+ +++|.++|+++|+++|+|++++.+. ...+ +.
T Consensus 123 -d~e~l~~ai~--------~~t~lV~lesP~-Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~---~~~p---~~ 183 (380)
T PRK06176 123 -DLSQIKKAIK--------PNTKALYLETPS-NPLLKITD---LAQCASVAKDHGLLTIVDNTFATPY---YQNP---LL 183 (380)
T ss_pred -CHHHHHHhcC--------cCceEEEEECCC-CCCceecC---HHHHHHHHHHcCCEEEEECCccccc---cCCc---cc
Confidence 8999999988 789999997765 59999887 8899999999999999999975322 1222 23
Q ss_pred cCccEEEEeccccCCCce---eeEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHH
Q 018240 196 QAADSASVCLSKGLGAPV---GSVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLA 271 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~~---gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 271 (359)
.++|++++|++|+++++. ||+++. ++++.++++..+...+...+ +..+.....+++... .++++..+++..+.
T Consensus 184 ~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~--~~~~~l~~~gl~tl~-~R~~~~~~~a~~la 260 (380)
T PRK06176 184 LGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLG--PQDSWLLQRGIKTLG-LRMEAHQKNALCVA 260 (380)
T ss_pred cCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCC--HHHHHHHHhccCcHH-HHHHHHHHHHHHHH
Confidence 489999999999998753 576666 56777777777776665553 333344444444333 37778888899999
Q ss_pred HHHhcCCCce-EecC---------------CccceEEEEEeccchHHHHHHHHHHHHhcCcee----------ccC----
Q 018240 272 EGLNQLKGLR-VDVD---------------AVETNIVYFEITEDSKLYAACLLKKLEEHGVLV----------MPE---- 321 (359)
Q Consensus 272 ~~l~~~~g~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~----------~~~---- 321 (359)
+.|++.|.+. +..+ ...+..+.|.+.. .....+|.+.|+-..+.. .|.
T Consensus 261 ~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~--~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~ 338 (380)
T PRK06176 261 EFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN--DSEAVAFVESLKLFILGESLGGVESLVGIPAFMTH 338 (380)
T ss_pred HHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC--HHHHHHHHHcCCcceEccCCCCCCceeeCCccccc
Confidence 9999887664 2222 1346678888864 235667777764322222 111
Q ss_pred -------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 322 -------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 322 -------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
..+.+|+++. + |+++++++-|++++++.
T Consensus 339 ~~~~~~~~~~~gi~~~liR~svG--l--E~~~dli~dl~~Al~~~ 379 (380)
T PRK06176 339 ACIPKEQREAAGIRDGLVRLSVG--I--EHEQDLLEDLEQAFAKI 379 (380)
T ss_pred ccCCHHHHHhcCCCcCeEEEEec--c--CCHHHHHHHHHHHHhhc
Confidence 2346999985 3 57888888888888754
No 235
>PLN00144 acetylornithine transaminase
Probab=99.95 E-value=8.3e-25 Score=192.98 Aligned_cols=323 Identities=16% Similarity=0.143 Sum_probs=213.7
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCc---cCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDV---LMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.+++||.++ +....+|++.+++.+....... ....+...++.+.+++..+.+...+++||++|+..+++.+..
T Consensus 15 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~f~~sGseA~e~AlklAr~ 94 (382)
T PLN00144 15 KEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASSFADRVFFCNSGTEANEAAIKFARK 94 (382)
T ss_pred CEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcCCCCeEEEeCCcHHHHHHHHHHHHH
Confidence 367899887 4455569999888875543211 122566678888888877766778999999999999998864
Q ss_pred hc--------------CCeEEecCC-CcceeeccccccccCCc------------cceeeecCCCCCCCHHHHHHHhcCC
Q 018240 76 TR--------------GSEVILGDN-SHIHIYENGGISTIGGV------------HPRTVKNNQDGTMDIDLIEAAIRDP 128 (359)
Q Consensus 76 ~~--------------g~~vl~~~~-~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~~~~~~l~~~l~~~ 128 (359)
.. ..+|+.-.. .|+.+.. + ....+. .+..++.+ |++.+++.++.
T Consensus 95 ~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~--~-~s~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~- 165 (382)
T PLN00144 95 YQRVRAPDKKDPAASSATEFVSFSNSFHGRTLG--A-LALTSKEQYRTPFEPLMPGVTFVEYG-----NLEAARKLIQK- 165 (382)
T ss_pred HHhccCCCCccccccccceEEEECCCcccccHH--H-HhcCCCccccccCCCCCCCeEEeCCC-----CHHHHHHhcCC-
Confidence 21 235665554 4444322 1 111111 11222222 78999988863
Q ss_pred CCCccCCceeEEEEeccccCCCceec-ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH--hhhcCccEEEEec
Q 018240 129 KGEIVYPTTRLICLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR--RLVQAADSASVCL 205 (359)
Q Consensus 129 ~~~~~~~~~~~v~i~~~~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~~d~~~~s~ 205 (359)
.++++|++++. +||+|... +.+++++|+++|++||+++|+||++.. +...+.... .....+| +.++
T Consensus 166 ------~~~aavi~eP~-q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg--~gr~g~~~~~~~~~~~PD--i~t~ 234 (382)
T PLN00144 166 ------GKTAAVFVEPV-QGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCG--LGRTGYLWAHEAYGVEPD--IMTL 234 (382)
T ss_pred ------CCeEEEEEccc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC--CCccchHhhhhhcCCCCC--EEEe
Confidence 57899999888 55766543 457799999999999999999999743 222333211 1222456 5577
Q ss_pred cccCCCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHH----hcCCC
Q 018240 206 SKGLGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGL----NQLKG 279 (359)
Q Consensus 206 ~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l----~~~~g 279 (359)
+|.+++... |++++++++.+.+... ..+.++..+++.++++...++...+ +..++..++.+++++.| ++.|.
T Consensus 235 sK~l~~G~pig~v~~~~~~~~~~~~~--~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~ 312 (382)
T PLN00144 235 AKPLAGGLPIGAVLVTEKVASAINPG--DHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPH 312 (382)
T ss_pred cccccCCcceEEEEEcHHHHhccCCC--CCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 899864333 7788888888876432 2344555567777777766643322 23344444444544444 44433
Q ss_pred ceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC-CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 280 LRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES-STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+.-. ...+.++|+.+.. ....+.+.+.++||.+.+.+ ...+|++++...+++++++++++|.+++.++
T Consensus 313 ~~~v--rg~G~~~~l~l~~----~~~~~~~~~~~~Gv~i~~~~~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 313 VKEV--RGVGLLVGIQLDV----PAGPLVDACRDSGLLVLTAGKGDVVRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred ceee--ecCceEEEEEecC----ccHHHHHHHHHCCeEEeecCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 3221 2378889998843 45688999999999998765 4899999987799999999999999998764
No 236
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.95 E-value=5.4e-25 Score=193.47 Aligned_cols=280 Identities=21% Similarity=0.231 Sum_probs=202.1
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.|....|++.++++.|.+.+++++||+.++..++ .++ ++||+|+++++.|.+.+... ......|++++.++..
T Consensus 49 ~p~~~~Le~~lA~l~g~~~~~~~~sG~aai~~~~-~~l-~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~---- 122 (377)
T PRK07671 49 NPTRAALEELIAVLEGGHAGFAFGSGMAAITAVM-MLF-SSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTS---- 122 (377)
T ss_pred ChHHHHHHHHHHHHhCCCceEEeCCHHHHHHHHH-HHh-CCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCC----
Confidence 6788999999999999999999999988776554 455 59999999999987665411 1234568888888643
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
|++++++.++ +++++|++++|+ ||||.+.+ +++|.++|+++|+++|+|+++..+.. .. ++.
T Consensus 123 -d~~~l~~ai~--------~~tklV~le~P~-NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~---~~---p~~ 183 (377)
T PRK07671 123 -NLEEVEEAIR--------PNTKAIYVETPT-NPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYW---QS---PIS 183 (377)
T ss_pred -CHHHHHHhcC--------CCCeEEEEECCC-CCCCcccC---HHHHHHHHHHcCCEEEEECCCCcccc---CC---hhh
Confidence 8999999998 789999997655 49999866 89999999999999999999643211 22 223
Q ss_pred cCccEEEEeccccCCCce---eeEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHH
Q 018240 196 QAADSASVCLSKGLGAPV---GSVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLA 271 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~~---gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 271 (359)
.++|+++.|++|+++++. +|+++. ++++.++++..+...+... ++..++.+...++.... ++++..+++..+.
T Consensus 184 ~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~--~~~~a~l~~~~l~tl~~-R~~~~~~na~~la 260 (377)
T PRK07671 184 LGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGIL--GPQDSWLLLRGLKTLGI-RMEEHETNSRAIA 260 (377)
T ss_pred hCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCC--CHHHHHHHHcCcChHHH-HHHHHHHHHHHHH
Confidence 478999999999998763 465554 6788888888877777665 44555555555555433 7888889999999
Q ss_pred HHHhcCCCce-EecCC---------------ccceEEEEEeccchHHHHHHHHHHHHhcCcee----------ccC----
Q 018240 272 EGLNQLKGLR-VDVDA---------------VETNIVYFEITEDSKLYAACLLKKLEEHGVLV----------MPE---- 321 (359)
Q Consensus 272 ~~l~~~~g~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~----------~~~---- 321 (359)
++|++.|++. +..|. ..+..+.|.+.. ......|.+.|+--.+.+ .|.
T Consensus 261 ~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~--~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~ 338 (377)
T PRK07671 261 EFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVGS--EETANKVLERLQYFTLAESLGAVESLISIPSQMTH 338 (377)
T ss_pred HHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeCC--HHHHHHHHHhCCcceEccCCCCCCeEeECCCcccc
Confidence 9999987664 22221 235677788832 345667777764222111 111
Q ss_pred -------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 322 -------------SSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 322 -------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
.++.+|+++. + |+.+.+++-|++++
T Consensus 339 ~~~~~~~~~~~gi~~~liR~svG--l--E~~~dl~~dl~~al 376 (377)
T PRK07671 339 ASIPADRRKELGITDGLIRISVG--I--EDGEDLIEDLAQAL 376 (377)
T ss_pred ccCCHHHHHhcCCCCCeEEEEec--c--CCHHHHHHHHHHHh
Confidence 2356999995 3 57788888887765
No 237
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.95 E-value=2.1e-25 Score=199.63 Aligned_cols=326 Identities=13% Similarity=0.068 Sum_probs=210.4
Q ss_pred cccccccCCCCCChHHHHHHHHHcCCCC-----C-CccC----CChHHHHHHHHHHHHhCCCC--eEEcCCchHHHHHHH
Q 018240 3 TRTVDLRSDTVTKPTEAMRAAMASAEVD-----D-DVLM----HDPTAFRLETEMAKVMGKEA--GLFVPSGTMGNLISV 70 (359)
Q Consensus 3 ~~~id~~~~~~~~~~~~~~~a~~~~~~~-----~-~~~~----~~~~~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l 70 (359)
.++++|.++..+.+++.+.+++.+.... . ..+. .......+++ + +++|.+. .++++|+|+++..++
T Consensus 26 ~~~iyld~~a~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~~ 103 (406)
T TIGR01814 26 NAVIYLDGNSLGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKEDEVVVMNTLTINLHLLL 103 (406)
T ss_pred CCcEEecCCCcCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCCcEEEeCCchHHHHHHH
Confidence 4568888666665567777777543211 0 1111 1122233333 4 7888763 467777888888888
Q ss_pred HHhhhhcC---CeEEecCCCcceeeccc-cccccCCccc----eeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEE
Q 018240 71 LVHCETRG---SEVILGDNSHIHIYENG-GISTIGGVHP----RTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICL 142 (359)
Q Consensus 71 ~~~~~~~g---~~vl~~~~~~~~~~~~~-~~~~~~g~~~----~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i 142 (359)
.++. +++ +.|++++..|.+.+... ..++..|+++ +.++.+.++.++++++++.++.. .+++++|++
T Consensus 104 ~~~~-~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~-----~~~t~lv~~ 177 (406)
T TIGR01814 104 ASFY-KPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKN-----GDDIAVILL 177 (406)
T ss_pred HHhc-CCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhc-----CCCeEEEEE
Confidence 8765 343 36888889988755411 1134567776 45555556788999999888531 157899999
Q ss_pred eccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHH
Q 018240 143 ENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKE 222 (359)
Q Consensus 143 ~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~ 222 (359)
+++.+ .||...| +++|.++|+++|+++++|++|+.|... ..... .++|++++|.|||+++|.||.++..++
T Consensus 178 ~~v~~-~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~G~~~---id~~~--~gvD~~~~s~hK~l~g~pG~~l~v~~~ 248 (406)
T TIGR01814 178 SGVQY-YTGQLFD---MAAITRAAHAKGALVGFDLAHAVGNVP---LDLHD--WGVDFACWCTYKYLNAGPGAGAFVHEK 248 (406)
T ss_pred ecccc-ccceecC---HHHHHHHHHHcCCEEEEEcccccCCcc---ccccc--CCCCEEEEcCccccCCCCCeEEEEehh
Confidence 77666 8999988 899999999999999999999886653 22223 379999999999985443544444333
Q ss_pred HHHHHHHHHHh-h--------------C-------CCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhc
Q 018240 223 FIKKARRLRKT-L--------------G-------GGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQ 276 (359)
Q Consensus 223 ~~~~~~~~~~~-~--------------~-------~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~ 276 (359)
....+...... + + .++ .+....++...+++ ...+...++..++.+++++.|++
T Consensus 249 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT-~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 327 (406)
T TIGR01814 249 HAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISN-PPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKA 327 (406)
T ss_pred hhhhcCCCCCcccCCCCccccccccccCCCccceeeCC-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHh
Confidence 22222110000 0 0 011 11122222223332 23444666777888899998887
Q ss_pred C----CCceEecCC---ccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEe-CCCCCHHHHHHHHHHHHH
Q 018240 277 L----KGLRVDVDA---VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVV-HHQISANDVHYTLSCFQK 348 (359)
Q Consensus 277 ~----~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~-~~~~~~~~i~~~~~~l~~ 348 (359)
+ +++++..+. ..++++.+.++. +..++.+.|.++||.+.......+|+++ +.+++++|+++++++|++
T Consensus 328 ~~~~~~~~~i~~~~~~~~r~~~v~~~~~~----~~~~~~~~L~~~gi~v~~~~~~~iRiS~~~~~nt~~did~l~~~l~~ 403 (406)
T TIGR01814 328 RCGGPPVLTIITPRDHAQRGCQLSLTHPV----PGKAVFQALIKRGVIGDKREPSVIRVAPVPLYNTFVDVYDAVNVLEE 403 (406)
T ss_pred hcCCCCceEEeCCCChhhcCCeEEEEecC----CHHHHHHHHHHCCEEEeccCCCeEEEechhccCCHHHHHHHHHHHHH
Confidence 5 357775432 134566666652 5678999998899988766667999998 678999999999999987
Q ss_pred HH
Q 018240 349 IY 350 (359)
Q Consensus 349 ~~ 350 (359)
++
T Consensus 404 ~~ 405 (406)
T TIGR01814 404 IL 405 (406)
T ss_pred Hh
Confidence 65
No 238
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=1.1e-24 Score=180.93 Aligned_cols=323 Identities=23% Similarity=0.245 Sum_probs=231.0
Q ss_pred cCCCCCChHHHHHHHHHcCCCC--------CCccCCChHHHHHH----HHHHHHhCCCCe-EEcCCchHHHHHHHHHhhh
Q 018240 9 RSDTVTKPTEAMRAAMASAEVD--------DDVLMHDPTAFRLE----TEMAKVMGKEAG-LFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 9 ~~~~~~~~~~~~~~a~~~~~~~--------~~~~~~~~~~~~l~----~~la~~~~~~~~-~~~~~gt~a~~~~l~~~~~ 75 (359)
+|.|+.. +.+.+++.....+ ..+|+.-+..+.+| ++.+++||.+.+ +...||++|+..++.+++
T Consensus 33 ASEN~~S--~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~av~~All- 109 (413)
T COG0112 33 ASENFTS--PAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLALL- 109 (413)
T ss_pred eccccCC--HHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHHHHHHHHHHc-
Confidence 3445554 5666666543322 34577766665555 457788999976 888999999999999999
Q ss_pred hcCCeEEecCCCcceeeccccccccCCc--cceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018240 76 TRGSEVILGDNSHIHIYENGGISTIGGV--HPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 76 ~~g~~vl~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
+|||+|+..+..|......+......|. +.+.++.+ +++.+|.|++++...+ .++++|+. .....| .
T Consensus 110 ~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e-------~kPK~ii~-G~SaY~--r 179 (413)
T COG0112 110 QPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKE-------VKPKLIIA-GGSAYS--R 179 (413)
T ss_pred CCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHH-------hCCCEEEE-Cccccc--c
Confidence 5999999877777766554433445554 34445666 5689999999999997 78999988 333222 3
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCH-HHHHHHHHHH
Q 018240 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSK-EFIKKARRLR 231 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~-~~~~~~~~~~ 231 (359)
.+ ++++++++|++.|+++++|.||..|... .|.-..++. .+|+++.|.||+|.+|.||++++++ ++.++++...
T Consensus 180 ~i---d~~~~reIad~VGA~L~~DmAHiaGLVA-~G~~p~P~~-~AdvVTtTTHKTlrGPrGG~Il~~~eel~kkin~aV 254 (413)
T COG0112 180 PI---DFKRFREIADEVGAYLMVDMAHVAGLIA-GGVHPNPLP-HADVVTTTTHKTLRGPRGGIILTNDEELAKKINSAV 254 (413)
T ss_pred cc---CHHHHHHHHHHhCceEEehHHHHHHHHh-cccCCCCCC-ccceEeCCcccCCCCCCceEEEeccHHHHHHhhhhc
Confidence 44 4899999999999999999999777654 444445554 6999999999999999999888875 7777765422
Q ss_pred Hh-hCCCcchhHHHHHHH---HHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHH
Q 018240 232 KT-LGGGMRQVGVLCAAA---LVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACL 307 (359)
Q Consensus 232 ~~-~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (359)
.. .-++. ..-.+++-+ ..+++-..++..++..+|++.|.+.|.+. |+++.........+.+.+.. .+.+....
T Consensus 255 FPg~qggp-l~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnHl~lVDl~~-~~~~Gk~a 331 (413)
T COG0112 255 FPGLQGGP-LMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNHLVLVDLRS-KGLTGKKA 331 (413)
T ss_pred CCccCCCh-HHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccceEEEEEccc-CCCCHHHH
Confidence 11 11111 111222222 23334444457788889999999999998 99998777777788888884 35678888
Q ss_pred HHHHHhcCcee----ccC------CCcEEEEEe----CCCCCHHHHHHHHHHHHHHHHH
Q 018240 308 LKKLEEHGVLV----MPE------SSTRVRIVV----HHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 308 ~~~l~~~gi~~----~~~------~~~~lRi~~----~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
...|.+.||.+ .|+ .+.+|||.. ..+..+++++++.+.|.++++.
T Consensus 332 e~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 332 EAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred HHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 88889999987 333 355799954 4467789999999999998875
No 239
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.95 E-value=1.5e-24 Score=194.64 Aligned_cols=322 Identities=18% Similarity=0.138 Sum_probs=213.6
Q ss_pred cCCCCCChHHHHHHHHHcCC-----CC---CCccCCChHHHHHHH----HHHHHhCCCCe-EE----cCCchHHHHHHHH
Q 018240 9 RSDTVTKPTEAMRAAMASAE-----VD---DDVLMHDPTAFRLET----EMAKVMGKEAG-LF----VPSGTMGNLISVL 71 (359)
Q Consensus 9 ~~~~~~~~~~~~~~a~~~~~-----~~---~~~~~~~~~~~~l~~----~la~~~~~~~~-~~----~~~gt~a~~~~l~ 71 (359)
+|.|+.. +.+++++.... .+ ...|+....++++|+ +.++.|+.+.. +. ..||+.|+..++.
T Consensus 41 asen~~s--~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~ 118 (475)
T PLN03226 41 ASENFTS--RAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYT 118 (475)
T ss_pred cCCccCC--HHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHH
Confidence 3445444 45555554433 11 234555567777775 46667777653 32 3899999999999
Q ss_pred HhhhhcCCeEEecCC---Ccc---eeeccccccccCCccce----eeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEE
Q 018240 72 VHCETRGSEVILGDN---SHI---HIYENGGISTIGGVHPR----TVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLI 140 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~---~~~---~~~~~~~~~~~~g~~~~----~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v 140 (359)
+++ ++||+|+..+. .|. +... + .+..+.... .+.++ +++.+|+++|++.+++ .++++|
T Consensus 119 aL~-~pgD~Il~~d~~~gGhl~H~~~~~-g--~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~-------~~pklI 187 (475)
T PLN03226 119 ALL-QPHDRIMGLDLPHGGHLSHGYQTD-G--KKISATSIYFESMPYRLDESTGLIDYDKLEKKAML-------FRPKLI 187 (475)
T ss_pred HhC-CCCCEEEECCCCcCcchhhhhhhc-c--cccccceEEEEeeeeeecCCCCCcCHHHHHHHHhh-------cCCeEE
Confidence 999 59999998442 332 2222 1 122222211 33333 5688999999999974 466666
Q ss_pred EEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecC
Q 018240 141 CLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGS 220 (359)
Q Consensus 141 ~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~ 220 (359)
++ +... +|+..| +++|.++|+++|+++++|++|+.|..+..+.. .++ .++|+++.|+||+|++|.||+++++
T Consensus 188 v~-~~S~--~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~-~p~-~~~Div~~t~hK~L~GP~Gg~I~~~ 259 (475)
T PLN03226 188 IA-GASA--YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAA-SPF-EYCDVVTTTTHKSLRGPRGGMIFFR 259 (475)
T ss_pred EE-ecCc--CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCC-CCC-CCCeEEEecCcccccCCCceEEEEc
Confidence 55 2222 456555 78999999999999999999999887644322 222 3799999999999977889888887
Q ss_pred HHHH-----------HHHHHHH--HhhCCCcchhHHHHHHHHHHHHHh----HHHHhhhHHHHHHHHHHHHhcCCCceEe
Q 018240 221 KEFI-----------KKARRLR--KTLGGGMRQVGVLCAAALVALQEN----VLVMLDGDHKKAKLLAEGLNQLKGLRVD 283 (359)
Q Consensus 221 ~~~~-----------~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~l~~~l~~~~g~~~~ 283 (359)
++.. +...... ...+....+++...++...+++.. .+.+.++..+++++|++.|++. |+.+.
T Consensus 260 ~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~-G~~l~ 338 (475)
T PLN03226 260 KGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK-GYKLV 338 (475)
T ss_pred hhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC-CCEEE
Confidence 7544 2211111 111122222333344444445432 3346778889999999999996 99987
Q ss_pred cCCccceEEEEEeccchHHHHHHHHHHHHhcCceec----cC-----CCcEEEE----EeCCCCCHHHHHHHHHHHHHHH
Q 018240 284 VDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVM----PE-----SSTRVRI----VVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----~~-----~~~~lRi----~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
.+.....++++.+.. .+++..++.+.|.+.||.+- |+ .+.++|+ ..+.+++++|++++.+.|.+++
T Consensus 339 ~~~t~~hi~lv~~~~-~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~ 417 (475)
T PLN03226 339 TGGTDNHLVLWDLRP-LGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAV 417 (475)
T ss_pred cCCCCCCEEEEEccC-CCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 654456778888754 34677889999999999883 22 3456898 4567889999999999999999
Q ss_pred HHH
Q 018240 351 AGV 353 (359)
Q Consensus 351 ~~~ 353 (359)
+..
T Consensus 418 ~~~ 420 (475)
T PLN03226 418 TIA 420 (475)
T ss_pred HHh
Confidence 843
No 240
>PLN02509 cystathionine beta-lyase
Probab=99.95 E-value=7.9e-25 Score=194.90 Aligned_cols=281 Identities=20% Similarity=0.228 Sum_probs=202.9
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.|....+++.++++.+.+.+++++||+.++. ++..++ ++||+|+++.+.|..+.... ......|++++.++..
T Consensus 132 npt~~aLE~~lA~leg~e~ai~~~SG~aAi~-~il~ll-~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~---- 205 (464)
T PLN02509 132 NPTRDALESLLAKLDKADRAFCFTSGMAALS-AVTHLI-KNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT---- 205 (464)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCcHHHHHH-HHHHHh-CCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCC----
Confidence 4778999999999999988899999987764 444555 69999999999987754200 1134568888877543
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
|++++++.++ +++++|+++++.| |+|.+. ++++|+++|+++|+++|+|++++.+.. +. ++.
T Consensus 206 -d~e~l~~ai~--------~~TklV~lesPsN-PtG~i~---Dl~~I~~lAk~~g~~lIVD~A~a~~~~---~~---pl~ 266 (464)
T PLN02509 206 -NLDEVAAAIG--------PQTKLVWLESPTN-PRQQIS---DIRKIAEMAHAQGALVLVDNSIMSPVL---SR---PLE 266 (464)
T ss_pred -CHHHHHHhCC--------cCCeEEEEECCCC-CCCCHH---HHHHHHHHHHHcCCEEEEECCcccccc---CC---hhh
Confidence 7899999987 7899999977665 999964 499999999999999999999754332 22 233
Q ss_pred cCccEEEEeccccCCCce---eeEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHH
Q 018240 196 QAADSASVCLSKGLGAPV---GSVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLA 271 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~~---gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 271 (359)
.++|++++|++|+++++. ||+++. ++.+.+.++..+...+... ++..++.++.+++.... ++++..+++.++.
T Consensus 267 ~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l--~p~~A~l~lr~L~tL~~-R~~r~~~nA~~la 343 (464)
T PLN02509 267 LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGL--APFDCWLCLRGIKTMAL-RIEKQQENARKIA 343 (464)
T ss_pred cCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCc--CHHHHHHHHhhhhhHHH-HHHHHHHHHHHHH
Confidence 478999999999998753 577775 5555566555554444333 66777777888887655 8899999999999
Q ss_pred HHHhcCCCce-EecCC---------------ccceEEEEEeccchHHHHHHHHHHHHhcCceec----------cC----
Q 018240 272 EGLNQLKGLR-VDVDA---------------VETNIVYFEITEDSKLYAACLLKKLEEHGVLVM----------PE---- 321 (359)
Q Consensus 272 ~~l~~~~g~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----------~~---- 321 (359)
+.|++.|.++ +..|. ..+..+.|.+.. ......|.+.|+--.+.+. |.
T Consensus 344 ~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~--~~~~~~f~~~l~l~~~a~slG~~~SLi~~p~~~sh 421 (464)
T PLN02509 344 MYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS--VALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSH 421 (464)
T ss_pred HHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCC--HHHHHHHHHcCCcceEcccCCCCCceeeCCccccc
Confidence 9999988774 43331 235667777732 2345677777643222221 11
Q ss_pred -------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 322 -------------SSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 322 -------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
..+.||+++. + |+++++++-|+++++
T Consensus 422 ~~~~~~~~~~~Gi~~~liRlSvG--l--E~~~DLi~Dl~~Al~ 460 (464)
T PLN02509 422 ASIPAEVREARGLTEDLVRISAG--I--EDVDDLISDLDIAFR 460 (464)
T ss_pred ccCCHHHHHhcCCCCCeEEEEec--c--CCHHHHHHHHHHHHc
Confidence 2457999995 3 578888888887775
No 241
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.95 E-value=1.1e-24 Score=194.40 Aligned_cols=284 Identities=23% Similarity=0.234 Sum_probs=203.5
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
++....+++.++++.|.+.+++++||++|+..++.+++ ++||+|+++.+.|....... ......|++++.++..
T Consensus 62 ~p~~~~le~~lA~l~g~~~al~~~SG~~Ai~~al~all-~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~---- 136 (427)
T PRK05994 62 NPTNAVLEERVAALEGGTAALAVASGHAAQFLVFHTLL-QPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADAD---- 136 (427)
T ss_pred CccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHh-CCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCC----
Confidence 56778999999999999999999999999999999887 59999999999987654300 1145578888888654
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
|++++++.++ +++++|+++++. ||+|.+.+ +++|.++|+++|+++|+|++++.+.. ..++.
T Consensus 137 -d~~~l~~ai~--------~~tklV~vesp~-NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~------~~pl~ 197 (427)
T PRK05994 137 -DPASFERAIT--------PRTKAIFIESIA-NPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYL------IRPIE 197 (427)
T ss_pred -CHHHHHHhcC--------cCCeEEEEECCC-CCCCeecC---HHHHHHHHHHcCCEEEEECCcccccc------CCccc
Confidence 8899999998 789999997655 59999987 79999999999999999999754221 22233
Q ss_pred cCccEEEEeccccCCCc---eeeEEecCH------------------H-----HHHHHH----------HHHHhhCCCcc
Q 018240 196 QAADSASVCLSKGLGAP---VGSVIVGSK------------------E-----FIKKAR----------RLRKTLGGGMR 239 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~---~gg~~~~~~------------------~-----~~~~~~----------~~~~~~~~~~~ 239 (359)
.++|+++.|++|++|++ .||+++... + +.+.+. ......|..
T Consensus 198 ~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~-- 275 (427)
T PRK05994 198 HGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPA-- 275 (427)
T ss_pred cCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCC--
Confidence 48999999999999865 346555321 1 111100 011223443
Q ss_pred hhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCce-EecC----------------CccceEEEEEeccchHH
Q 018240 240 QVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLR-VDVD----------------AVETNIVYFEITEDSKL 302 (359)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~----------------~~~~~~~~~~~~~~~~~ 302 (359)
+++..++....+++.... ++++..+++..+.+.|++.|++. +..| ...+..+.|.+.. ...
T Consensus 276 ~~~~~A~l~~~~l~tL~~-r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~sf~l~~-~~~ 353 (427)
T PRK05994 276 ISPFNAFLILTGIETLPL-RMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGAGAVFTFGLKG-GYE 353 (427)
T ss_pred CCHHHHHHHHcCcccHHH-HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCceEEEEEEecC-CHH
Confidence 467777888888887665 88899999999999999987764 3222 1235567788864 223
Q ss_pred HHHHHHHHHHhcCceec----------cC-----------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 303 YAACLLKKLEEHGVLVM----------PE-----------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~~----------~~-----------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
...+|.+.|+--.+.+. |. ..+.||+++. + |+.+.+++.|++++++
T Consensus 354 ~~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG--l--E~~~dli~dl~~Al~~ 426 (427)
T PRK05994 354 AGVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVVRLSIG--I--EDVDDIIADLEQALAK 426 (427)
T ss_pred HHHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcEEEEec--c--CCHHHHHHHHHHHHhh
Confidence 55677777743332221 11 1346999985 3 5778888888887764
No 242
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.95 E-value=9.4e-25 Score=193.98 Aligned_cols=285 Identities=22% Similarity=0.235 Sum_probs=204.5
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeecc-ccccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYEN-GGISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~ 115 (359)
.|....+|+.++++.|.+.+++++||+.|+..++..++ ++||+|+++...|.++... .......|+++..++. .
T Consensus 68 ~pt~~~le~~la~l~g~~~~v~fsSG~~Ai~~al~~ll-~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-~--- 142 (437)
T PRK05613 68 NPTVEALENRIASLEGGVHAVAFASGQAAETAAILNLA-GAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVEN-P--- 142 (437)
T ss_pred ChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhc-CCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECC-C---
Confidence 68889999999999999999999999999998888887 5999999999998876420 0124567888888862 1
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
.|++++++.++ +++++|+++++.| |+|.+.| +++|+++|+++|+++|+|.+++.+.. ..++.
T Consensus 143 ~d~e~l~~~l~--------~~tk~V~~e~~~N-p~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~------~~p~~ 204 (437)
T PRK05613 143 DDPESWQAAVQ--------PNTKAFFGETFAN-PQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL------VRPLE 204 (437)
T ss_pred CCHHHHHHhCC--------ccCeEEEEECCCC-CCCcccC---HHHHHHHHHHcCCeEEEECCCccccc------cChHH
Confidence 18899999998 7899999876554 9998777 89999999999999999999755332 12223
Q ss_pred cCccEEEEeccccCCCc---eeeEEecCHHH-----------------------------------H-HHHHHHHHhhCC
Q 018240 196 QAADSASVCLSKGLGAP---VGSVIVGSKEF-----------------------------------I-KKARRLRKTLGG 236 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~---~gg~~~~~~~~-----------------------------------~-~~~~~~~~~~~~ 236 (359)
.++|++++|+||++++. .||+++.++.+ . +.........|.
T Consensus 205 ~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 284 (437)
T PRK05613 205 LGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGA 284 (437)
T ss_pred hCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCC
Confidence 38999999999999864 35766643220 0 011122233444
Q ss_pred CcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCce-EecCC----------------ccceEEEEEeccc
Q 018240 237 GMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLR-VDVDA----------------VETNIVYFEITED 299 (359)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~~----------------~~~~~~~~~~~~~ 299 (359)
.. ++..++....+++...- ++++..+++..+.+.|++.|.+. +..|. ..+.++.|.+..
T Consensus 285 ~~--~p~~a~l~~rgl~TL~l-R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~sf~l~~- 360 (437)
T PRK05613 285 TL--SPFNAWVTAQGLDTLSL-RLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYTGSVLSFDIKG- 360 (437)
T ss_pred CC--CHHHHHHHHcccCcHHH-HHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCCceEEEEEecC-
Confidence 44 67777777888877655 88899999999999999987763 33221 135577888864
Q ss_pred hHHHHHHHHHHHHhcCcee----------ccC-----------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 300 SKLYAACLLKKLEEHGVLV----------MPE-----------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 300 ~~~~~~~~~~~l~~~gi~~----------~~~-----------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
....+..|.+.|+-..+.. .|. .++.||+++. + |+.+++++.|.+++++
T Consensus 361 ~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvG--l--E~~~dLi~Dl~~Al~~ 436 (437)
T PRK05613 361 GKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVRLSVG--I--EDIDDIIADLEGGFAA 436 (437)
T ss_pred CHHHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEEEEec--c--CCHHHHHHHHHHHHhh
Confidence 2235667777774322222 111 2356999985 3 5788888888888764
No 243
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.94 E-value=1.9e-24 Score=195.96 Aligned_cols=317 Identities=17% Similarity=0.166 Sum_probs=208.6
Q ss_pred HHHHHHHHcCC--CCCCccCC---Ch----HHHHHHHHHHHHhCCCCe-EEcCCchHHHHHHHHH---hhhhcCC----e
Q 018240 18 EAMRAAMASAE--VDDDVLMH---DP----TAFRLETEMAKVMGKEAG-LFVPSGTMGNLISVLV---HCETRGS----E 80 (359)
Q Consensus 18 ~~~~~a~~~~~--~~~~~~~~---~~----~~~~l~~~la~~~~~~~~-~~~~~gt~a~~~~l~~---~~~~~g~----~ 80 (359)
|.+.+++.+.. .+...|++ ++ ...++++.+++++|.+.. +..++|+.+...++.. ....+|+ +
T Consensus 84 p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~ 163 (481)
T PRK04366 84 PKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTE 163 (481)
T ss_pred HHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCE
Confidence 67777777652 22333422 23 335667778889998865 4446676666554332 2224555 8
Q ss_pred EEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHH
Q 018240 81 VILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTD 160 (359)
Q Consensus 81 vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~ 160 (359)
|+++.+.|.+... .+...|++++.++.+.++.+|+++|++.++ +++++|++.+ +| |||.+ .++++
T Consensus 164 Vlv~~~~hp~~~~---~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~--------~~t~~V~v~~-Pn-~tG~~--~~dl~ 228 (481)
T PRK04366 164 VIVPDSAHGTNPA---SAAMAGFKVVEIPSNEDGLVDLEALKAAVG--------EDTAALMLTN-PN-TLGLF--ERNIL 228 (481)
T ss_pred EEEcCCccHhHHH---HHHHcCCEEEEeecCCCCCcCHHHHHhhcc--------cCCeEEEEeC-CC-Ccccc--chHHH
Confidence 9999999977664 367889999999887788999999999998 6888988855 55 89964 34699
Q ss_pred HHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCce------eeEEecCHHHHHHHHHH----
Q 018240 161 SVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV------GSVIVGSKEFIKKARRL---- 230 (359)
Q Consensus 161 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~------gg~~~~~~~~~~~~~~~---- 230 (359)
+|.++|+++|+++++|+++..+..+. .+... .++|+++++.||+||+|. .|+++.++++.+++...
T Consensus 229 eI~~~a~~~gal~iVD~a~~~~~~g~--~~~~~--~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~ 304 (481)
T PRK04366 229 EIAEIVHEAGGLLYYDGANLNAILGK--ARPGD--MGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEK 304 (481)
T ss_pred HHHHHHHHcCCEEEEEecChhhhccc--CCccc--cCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeec
Confidence 99999999999999999985432221 12223 389999999999997663 26787887776664200
Q ss_pred -HHhhCC------------CcchhHHHHHHHHHHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEE
Q 018240 231 -RKTLGG------------GMRQVGVLCAAALVAL----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVY 293 (359)
Q Consensus 231 -~~~~~~------------~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~ 293 (359)
...+.. .++.+...+.+++..+ .+.+++..++..+++++|++.|+++ +++.........+.
T Consensus 305 ~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~ 382 (481)
T PRK04366 305 DGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFV 382 (481)
T ss_pred cCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEE
Confidence 000000 0001112222222222 2333334566778899999999986 33322211112233
Q ss_pred EEec--cchHHHHHHHHHHHHhcCceec----cC-CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 294 FEIT--EDSKLYAACLLKKLEEHGVLVM----PE-SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 294 ~~~~--~~~~~~~~~~~~~l~~~gi~~~----~~-~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
+... ...+.+..++.+.|.++||.+. |. ....+|++++..++++|+|++++.|+++.++...
T Consensus 383 ~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~ 451 (481)
T PRK04366 383 LSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIAEEAKE 451 (481)
T ss_pred EECccccccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3321 1112467899999999999863 22 2568999999999999999999999999887654
No 244
>PRK02769 histidine decarboxylase; Provisional
Probab=99.94 E-value=1.1e-24 Score=190.55 Aligned_cols=289 Identities=14% Similarity=0.163 Sum_probs=206.2
Q ss_pred HHHHHHHHHHHHhCCCC----eEEcCCchHHHHHHHHHhhh-hcCCeEEecCCCcceeeccccccccCCccceeeecCCC
Q 018240 39 TAFRLETEMAKVMGKEA----GLFVPSGTMGNLISVLVHCE-TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQD 113 (359)
Q Consensus 39 ~~~~l~~~la~~~~~~~----~~~~~~gt~a~~~~l~~~~~-~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 113 (359)
...++.+.+++++|.+. ++++++||+++..++..... .+++.|++++..|++..+ + +...|.+.+.++..++
T Consensus 66 ~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~k-a--~~~lg~~~~~V~~~~~ 142 (380)
T PRK02769 66 FERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSK-I--ARLLRIKSRVITSLPN 142 (380)
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHH-H--HHHcCCCCceeccCCC
Confidence 44677777899999862 37888999999988876642 367889999999999876 3 5667888888887788
Q ss_pred CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcC---cEEEEecccccchhhhcCc-
Q 018240 114 GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHG---LKLHIDGARIFNAAVALGV- 189 (359)
Q Consensus 114 ~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~---~~li~D~a~~~~~~~~~~~- 189 (359)
+.+|+++|++.+++. +.++.+|++ +..+|++|.+-| +++|.++|+++| +++++|.|++.+..+....
T Consensus 143 g~id~~~L~~~i~~~-----~~~t~lvv~-t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~ 213 (380)
T PRK02769 143 GEIDYDDLISKIKEN-----KNQPPIIFA-NIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILPFVNNP 213 (380)
T ss_pred CcCcHHHHHHHHHhC-----CCCcEEEEE-EeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeecccCcc
Confidence 999999999999842 135778877 556669999877 899999999998 6999999987655542211
Q ss_pred hhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHHhhCC-----CcchhHHHHHHHHHHH----HHhHHHH
Q 018240 190 PVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRKTLGG-----GMRQVGVLCAAALVAL----QENVLVM 259 (359)
Q Consensus 190 ~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l----~~~~~~~ 259 (359)
...++..++|.+++|.||++++|.| |+++.+++..+.+.....+... ..+.++......+.++ ....++.
T Consensus 214 ~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~ 293 (380)
T PRK02769 214 PPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQR 293 (380)
T ss_pred ccCCccCCCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHH
Confidence 1122223799999999999998988 8888877666554211111110 0011222233333333 3445557
Q ss_pred hhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHH
Q 018240 260 LDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDV 339 (359)
Q Consensus 260 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i 339 (359)
.++..++++++.+.|++. |+++...| ..+.+.|..+. + ++. +|..+.+. +..+|+++.+.++++.+
T Consensus 294 ~~~~~~la~~l~~~L~~~-g~~~~~~p-~~~~v~f~~~~----~--~~~-----~~w~l~~~-~~~~hi~~~~~~~~~~~ 359 (380)
T PRK02769 294 VQHCLDMAQYAVDRLQAN-GIPAWRNP-NSITVVFPCPS----E--RIW-----KKWHLATS-GNQAHIITMPHHNKQQI 359 (380)
T ss_pred HHHHHHHHHHHHHHHHhC-CCEEEcCC-CceEEEEcCCC----H--HHH-----hCeeEccc-CCEEEEEECCCCCHHHH
Confidence 788889999999999987 99886544 67777776544 1 221 56666544 35899999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 018240 340 HYTLSCFQKIYAGV 353 (359)
Q Consensus 340 ~~~~~~l~~~~~~~ 353 (359)
|.+++.|...+...
T Consensus 360 ~~f~~dl~~~~~~~ 373 (380)
T PRK02769 360 DSLIDELIFDLKNP 373 (380)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999998877643
No 245
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.94 E-value=4.9e-24 Score=185.14 Aligned_cols=339 Identities=17% Similarity=0.172 Sum_probs=227.5
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCC----CCccCCChHHHHHHHHHHHHhCC---CCeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVD----DDVLMHDPTAFRLETEMAKVMGK---EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~~~---~~~~~~~~gt~a~~~~l~ 71 (359)
..+|||.++ ++...||.+.+++.+.... ...|..++...++-+.+.+.+.. +..++++||++|+..+++
T Consensus 56 ~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiK 135 (447)
T COG0160 56 NEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIK 135 (447)
T ss_pred CEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHH
Confidence 367999995 4456669999999884432 22344457778888888888865 346899999999999999
Q ss_pred HhhhhcC-CeEE-ecCCCcceeeccccccccCCc-------------cceeeecCCCC--C----------CCHHHHHHH
Q 018240 72 VHCETRG-SEVI-LGDNSHIHIYENGGISTIGGV-------------HPRTVKNNQDG--T----------MDIDLIEAA 124 (359)
Q Consensus 72 ~~~~~~g-~~vl-~~~~~~~~~~~~~~~~~~~g~-------------~~~~v~~~~~~--~----------~~~~~l~~~ 124 (359)
.+....| ..|+ .....|..++. + ..+.+. .++.+|.+..+ . -..+.+++.
T Consensus 136 iAr~~Tgr~~viaf~~afHG~T~g--a-lslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~ 212 (447)
T COG0160 136 IARAYTGRPGVIAFDGAFHGRTLG--A-LSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERA 212 (447)
T ss_pred HHHHHhCCCcEEEECCcccccchh--h-HHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHH
Confidence 9875444 3355 55555554432 1 121111 13333333221 1 123345554
Q ss_pred hcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEE
Q 018240 125 IRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSAS 202 (359)
Q Consensus 125 l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~ 202 (359)
+... .....+++++++++..+..+-.+.|.++++++.++|++||+++|+||+|...+.. |.. +..+.-.+|++
T Consensus 213 i~~~--~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRT--G~~fa~E~~gv~PDiv- 287 (447)
T COG0160 213 LFDL--EVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRT--GKMFAFEHFGVEPDIV- 287 (447)
T ss_pred HHhh--cCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcc--ccchhhhhcCCCCCEE-
Confidence 5432 1222579999999999954444567799999999999999999999999655443 321 12222246666
Q ss_pred EeccccCCCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC-CC
Q 018240 203 VCLSKGLGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL-KG 279 (359)
Q Consensus 203 ~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~-~g 279 (359)
+++|.+|+... +.++.++++.+. ....+++++..+++.++++...++...+ ...++..+..++|++.|.++ ..
T Consensus 288 -t~aK~ig~G~Pl~avv~r~ei~~~---~~g~~~~Tf~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~ 363 (447)
T COG0160 288 -TLAKSLGGGLPLSAVVGRAEIMDW---PPGGHGGTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEK 363 (447)
T ss_pred -EecccccCCCceeEEeccHHhccc---CCcccCCCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhh
Confidence 55577765332 557888888773 3344555566778888888888874443 46667777888888888764 11
Q ss_pred ceEec-CCccceEEEEEecc------chHHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 280 LRVDV-DAVETNIVYFEITE------DSKLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 280 ~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
..... -+..+.++.+.+.. +.....+.+.+.+.++|+.+...+ .+.+||.+...++++++|+++++|.+++
T Consensus 364 ~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~~~nviRi~PPL~is~e~~d~~l~il~~al 443 (447)
T COG0160 364 HPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGPHGNVLRILPPLTISDEELDEGLDILEEAL 443 (447)
T ss_pred cCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccCCCCcEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 11111 13456677776653 233567899999999999987777 7899999999999999999999999998
Q ss_pred HHH
Q 018240 351 AGV 353 (359)
Q Consensus 351 ~~~ 353 (359)
+++
T Consensus 444 ~~~ 446 (447)
T COG0160 444 KEA 446 (447)
T ss_pred Hhh
Confidence 865
No 246
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.94 E-value=3.9e-24 Score=183.54 Aligned_cols=285 Identities=23% Similarity=0.216 Sum_probs=215.3
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.|....+|+.++++-|.+.++.++||..|+..++..++ ++||+|++++..|.+++.-. .+.+..|+++.+++..
T Consensus 62 nPT~~~lE~~~a~LEg~~~~~afsSGmaAI~~~~l~ll-~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~---- 136 (396)
T COG0626 62 NPTRDALEEALAELEGGEDAFAFSSGMAAISTALLALL-KAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG---- 136 (396)
T ss_pred CccHHHHHHHHHHhhCCCcEEEecCcHHHHHHHHHHhc-CCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCC----
Confidence 78889999999999999999999999999999999998 59999999999888776411 2345688888888654
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
+.+.+++.+.. +++++|++++|.| |+-.+.+ +.+|+++|+++|+++|+|++. ..+....++.
T Consensus 137 -~~~~~~~~~~~-------~~tk~v~lEtPsN-P~l~v~D---I~~i~~~A~~~g~~vvVDNTf------atP~~q~PL~ 198 (396)
T COG0626 137 -DDEALEAAIKE-------PNTKLVFLETPSN-PLLEVPD---IPAIARLAKAYGALVVVDNTF------ATPVLQRPLE 198 (396)
T ss_pred -ChHHHHHHhcc-------cCceEEEEeCCCC-ccccccc---HHHHHHHHHhcCCEEEEECCc------ccccccChhh
Confidence 66677777773 4899999998887 9988766 999999999999999999982 1233455566
Q ss_pred cCccEEEEeccccCCCc---eeeEEecC-HHHHHHHHHHHH-hhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHH
Q 018240 196 QAADSASVCLSKGLGAP---VGSVIVGS-KEFIKKARRLRK-TLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLL 270 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~---~gg~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 270 (359)
.++|+++.|.+|++++- .+|+++++ +++.+.+..... ..|... ++..++..+.+++...- ++++..+++..+
T Consensus 199 ~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l--~p~dA~l~lRGlkTL~~-Rm~~~~~nA~~I 275 (396)
T COG0626 199 LGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVL--SPFDAWLLLRGLRTLAL-RMERHNENALKI 275 (396)
T ss_pred cCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCC--CHHHHHHHHhccchHHH-HHHHHHHHHHHH
Confidence 68999999999999863 45766654 555555433333 466655 66777777888887665 889999999999
Q ss_pred HHHHhcCCCce-EecCC---------------ccceEEEEEeccchHHHHHHHHHHHHhcCceeccC-------------
Q 018240 271 AEGLNQLKGLR-VDVDA---------------VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE------------- 321 (359)
Q Consensus 271 ~~~l~~~~g~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~------------- 321 (359)
.++|++.|.++ +..|. ..+..+.|.+... ....+|.+.|+-..+....|
T Consensus 276 A~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~--~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~t 353 (396)
T COG0626 276 AEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE--EAAKKFLDSLKLFKLAESLGGVESLISHPATMT 353 (396)
T ss_pred HHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh--HHHHHHHHhCCccEEeccCCCcccccccccccC
Confidence 99999988775 44442 3567788888872 35667777765433322111
Q ss_pred --------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 322 --------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 322 --------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.++-+|+++. -|+++.+++-|+++++++
T Consensus 354 h~~~~~~~r~~~Gi~~~LvRlSVG----lEd~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 354 HASIPLEERAKAGITDGLVRLSVG----LEDVEDLIADLEQALAKA 395 (396)
T ss_pred cccCCHhHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHHhh
Confidence 2456999985 368888888888887764
No 247
>PLN02590 probable tyrosine decarboxylase
Probab=99.94 E-value=1.1e-23 Score=189.96 Aligned_cols=311 Identities=20% Similarity=0.185 Sum_probs=208.0
Q ss_pred ccCCChHHHHHHHH----HHHHhCCCC---------eEEcCCchHHHHHHHHHhhhh----------cCCeEEecCCCcc
Q 018240 33 VLMHDPTAFRLETE----MAKVMGKEA---------GLFVPSGTMGNLISVLVHCET----------RGSEVILGDNSHI 89 (359)
Q Consensus 33 ~~~~~~~~~~l~~~----la~~~~~~~---------~~~~~~gt~a~~~~l~~~~~~----------~g~~vl~~~~~~~ 89 (359)
.+..+|...++|+. +++++|.+. ++++++||+|++.++.++..+ +.-.|++++.+|+
T Consensus 161 ~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~ 240 (539)
T PLN02590 161 TWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHS 240 (539)
T ss_pred CcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchH
Confidence 34456666666655 556677763 488999999999999987642 1124667899999
Q ss_pred eeeccccccccCCc---cceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHH
Q 018240 90 HIYENGGISTIGGV---HPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGE 164 (359)
Q Consensus 90 ~~~~~~~~~~~~g~---~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~ 164 (359)
+..+ + +.+.|+ .++.|+.+ .++.+|++.|+++|++.... ...-++++.+...+.||.+= ++++|.+
T Consensus 241 Sv~K-A--a~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~---g~~P~~VvaTaGTT~tGaiD---pl~~Ia~ 311 (539)
T PLN02590 241 SFRK-A--CLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAK---GFIPFFICATVGTTSSAAVD---PLVPLGN 311 (539)
T ss_pred HHHH-H--HHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhc---CCCcEEEEEEeCCCCCcccC---CHHHHHH
Confidence 9776 3 566665 57777776 45789999999999742211 12234444477777788864 4999999
Q ss_pred HHHHcCcEEEEecccccchhhhcCchhHhh---hcCccEEEEeccccCCCcee-eEEec-CHH-HHHHHHHHHHhh----
Q 018240 165 IAKKHGLKLHIDGARIFNAAVALGVPVRRL---VQAADSASVCLSKGLGAPVG-SVIVG-SKE-FIKKARRLRKTL---- 234 (359)
Q Consensus 165 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~~d~~~~s~~K~~g~~~g-g~~~~-~~~-~~~~~~~~~~~~---- 234 (359)
+|++||+|++||+|++..... ......+ ...+|.+++.+|||++.|.+ |+++. ++. +.+.+.....+.
T Consensus 312 i~~~~g~WlHVDaA~GG~al~--~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~ 389 (539)
T PLN02590 312 IAKKYGIWLHVDAAYAGNACI--CPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKV 389 (539)
T ss_pred HHHHhCCeEEEecchhhhhhc--ChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcc
Confidence 999999999999996443332 2222222 24689999999999998877 55554 432 323222111111
Q ss_pred ------------CCC--cchhHHHHHHHHHHH-HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccc
Q 018240 235 ------------GGG--MRQVGVLCAAALVAL-QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITED 299 (359)
Q Consensus 235 ------------~~~--~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 299 (359)
+.. -+...+-.+..+..+ .+...+.+++..++++++.+.|++.|+|++..+ ...++++|++.++
T Consensus 390 ~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~-~~l~iVcFr~~~~ 468 (539)
T PLN02590 390 SKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTT-RYFSLVCFRLAPV 468 (539)
T ss_pred cccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CceEEEEEEecCC
Confidence 111 111122222233333 344555888899999999999999999998654 4778888887541
Q ss_pred --h----HHHHHHHHHHHHhcCceecc----CCCcEEEEEe-CCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 300 --S----KLYAACLLKKLEEHGVLVMP----ESSTRVRIVV-HHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 300 --~----~~~~~~~~~~l~~~gi~~~~----~~~~~lRi~~-~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
. .....++.++|.+.|..... .+..+||+++ ++..++++++.+++.|.+...++.+
T Consensus 469 ~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~~ 535 (539)
T PLN02590 469 DGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTR 535 (539)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 0 11235677777667776522 3567899985 7778899999999999998877754
No 248
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.94 E-value=7.1e-24 Score=187.97 Aligned_cols=334 Identities=16% Similarity=0.145 Sum_probs=218.2
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCcc---CCChHHHHHHHHHHHHhCC-CCeEEcCCchHHHHHHHHHhh
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDVL---MHDPTAFRLETEMAKVMGK-EAGLFVPSGTMGNLISVLVHC 74 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~~l~~~la~~~~~-~~~~~~~~gt~a~~~~l~~~~ 74 (359)
.++|||.++ +....+|.+.+++.+.......+ ..++...++.+.+++..+. +...+++||++|+..|++.+.
T Consensus 40 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr 119 (408)
T PRK04612 40 REYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVR 119 (408)
T ss_pred CEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHH
Confidence 467899877 34555699999888755432111 1245566777888877643 456899999999999999887
Q ss_pred hh---c-----CCeEEecCCC-cceeeccccccccCCcc------------ceeeecCCCCCCCHHHHHHHhcCCCCCcc
Q 018240 75 ET---R-----GSEVILGDNS-HIHIYENGGISTIGGVH------------PRTVKNNQDGTMDIDLIEAAIRDPKGEIV 133 (359)
Q Consensus 75 ~~---~-----g~~vl~~~~~-~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~~~~~~l~~~l~~~~~~~~ 133 (359)
.- . ..+|+....+ |..+.. + ....+.. +..++. .|.+.+++.++.
T Consensus 120 ~~~~~~g~~~~r~~ii~~~~~yHG~t~~--~-~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~~------ 185 (408)
T PRK04612 120 KWASSQGRPADKRVIVTFRGSFHGRTLA--A-VTATAQPKYQEGYEPLPGGFRYVDF-----NDVEALEAAMAG------ 185 (408)
T ss_pred HHHHhhCCCCCCcEEEEECCCcCCccHH--H-HHhcCCcccccCCCCCCCCceEcCC-----CCHHHHHHhhCC------
Confidence 42 1 2356655554 443321 1 1111100 111222 278889888863
Q ss_pred CCceeEEEEeccccCCCceec-ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCc
Q 018240 134 YPTTRLICLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAP 212 (359)
Q Consensus 134 ~~~~~~v~i~~~~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~ 212 (359)
.++.+|++++..+ .+|... +.+++++|+++|++||+++|+||+|.. ++..+........+....+.+++|.++++
T Consensus 186 -~~~aavi~eP~~~-~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg--~gr~G~~~a~~~~~~~pdi~t~~K~l~~G 261 (408)
T PRK04612 186 -GDVAAVMLEPIQG-EGGVMPAAPGFLARVRALCDQHDALLVLDEIQCG--MGRTGTLFAHWQEQVTPDIVTLAKALGGG 261 (408)
T ss_pred -CCEEEEEECCccC-CCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcCCchhhhhhcCCCCCEEEEcchhcCC
Confidence 5788888877655 344443 357999999999999999999999753 32334322222223344456778999643
Q ss_pred ee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcCC-CceEe-cCCcc
Q 018240 213 VG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQLK-GLRVD-VDAVE 288 (359)
Q Consensus 213 ~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~~-g~~~~-~~~~~ 288 (359)
.. |+++.++++.+.+... ..+.++..++..++++...++...+ +..++..++.+++++.|+++. .+.+. .....
T Consensus 262 ~piga~~~~~~~~~~~~~~--~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~ 339 (408)
T PRK04612 262 FPIGAMLAGPKVAETMQFG--AHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEFGVFAQVRGR 339 (408)
T ss_pred CceEEEEECHHHHhhhcCC--CcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecc
Confidence 22 5566777777765432 2344455567777788877765433 356667777888888887641 11111 11345
Q ss_pred ceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 018240 289 TNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCEE 356 (359)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 356 (359)
+.++.+.+..+....+..+.+.|.++|+.+.+.+...+|+.++..++++++++++++|+++++++.++
T Consensus 340 Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~~~~ 407 (408)
T PRK04612 340 GLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTDAELADGLARLRLALADYVAQ 407 (408)
T ss_pred ceEEEEEecCchhhHHHHHHHHHHHCCeEEeeCCCCEEEEcCCccCCHHHHHHHHHHHHHHHHHHhhc
Confidence 66666666431112467888899999999988877899999999999999999999999999887653
No 249
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.94 E-value=1.8e-24 Score=191.14 Aligned_cols=245 Identities=19% Similarity=0.201 Sum_probs=178.9
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.|...++++.+++++|.+.+++++||+.|+..++. ++ ++||+|+++++.|.+.+... ..++..|++++.++..
T Consensus 53 ~p~~~~le~~lA~l~g~~~~v~~~sG~~ai~~~l~-~l-~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~---- 126 (390)
T PRK08064 53 NPTREALEDIIAELEGGTKGFAFASGMAAISTAFL-LL-SKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT---- 126 (390)
T ss_pred ChhHHHHHHHHHHHhCCCCeEEECCHHHHHHHHHH-Hh-CCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCC----
Confidence 67789999999999999989999999999887775 55 58999999999987655311 1245578888888764
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
|++++++.++ +++++|+++++.| |||.+.+ +++|.++|+++|+++|+|++++.+.. ..+ +.
T Consensus 127 -d~~~l~~~l~--------~~tklV~l~~p~N-ptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~---~~~---~~ 187 (390)
T PRK08064 127 -NLEEVAQNIK--------PNTKLFYVETPSN-PLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLL---QKP---LD 187 (390)
T ss_pred -CHHHHHHhcC--------CCceEEEEECCCC-CCcEecc---HHHHHHHHHHcCCEEEEECCCCcccc---cCc---hh
Confidence 7899999988 7899999976555 9999987 89999999999999999999643221 111 22
Q ss_pred cCccEEEEeccccCCCce---eeEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHH
Q 018240 196 QAADSASVCLSKGLGAPV---GSVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLA 271 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~~---gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 271 (359)
.++|+++.|+||+++++. +|+++. ++++.+.++.....++... ++..++.....++... .++++..+++..+.
T Consensus 188 ~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~--~~~~a~l~~~gl~tl~-~R~~~~~~~a~~la 264 (390)
T PRK08064 188 LGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVL--GVQDCWLVLRGLKTLH-VRLEHSSETANKIA 264 (390)
T ss_pred hCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCC--CHHHHHHHHcccCcHH-HHHHHHHHHHHHHH
Confidence 378999999999997654 375555 6788888887777666554 4444455555555543 37888889999999
Q ss_pred HHHhcCCCce-EecC---------------CccceEEEEEeccchHHHHHHHHHHH
Q 018240 272 EGLNQLKGLR-VDVD---------------AVETNIVYFEITEDSKLYAACLLKKL 311 (359)
Q Consensus 272 ~~l~~~~g~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (359)
+.|++.|.+. +..+ ...+.++.|.+.. ..+...|.+.|
T Consensus 265 ~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~--~~~~~~f~~~l 318 (390)
T PRK08064 265 LYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS--EEAVRQFVSHV 318 (390)
T ss_pred HHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC--HHHHHHHHHhC
Confidence 9999875442 2221 1346678888854 12344444444
No 250
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.94 E-value=2.7e-24 Score=192.82 Aligned_cols=339 Identities=18% Similarity=0.137 Sum_probs=218.4
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC--c--cCCChHHHHHHHHHHHHhC--CCCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD--V--LMHDPTAFRLETEMAKVMG--KEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~--~--~~~~~~~~~l~~~la~~~~--~~~~~~~~~gt~a~~~~l~~ 72 (359)
.+++||.++ +....+|++.+++.+...... . ....+...++.+.+++.++ .+...+++||++|+..|++.
T Consensus 42 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~kl 121 (423)
T PRK05964 42 RELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKM 121 (423)
T ss_pred CEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHH
Confidence 357899876 445556999988887654321 1 1235666788888888874 45678999999999999998
Q ss_pred hhhh------c-CCeEEecCCCcceeeccccccccCCc------------cceeeecCCC--CCCCHHHHHHHhcCCCCC
Q 018240 73 HCET------R-GSEVILGDNSHIHIYENGGISTIGGV------------HPRTVKNNQD--GTMDIDLIEAAIRDPKGE 131 (359)
Q Consensus 73 ~~~~------~-g~~vl~~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~--~~~~~~~l~~~l~~~~~~ 131 (359)
++.- + ..+|+..+.+|..... +. ....+- ....++.+.+ ...+++.+++.+++..
T Consensus 122 ar~~~~~~~~~~r~~ii~~~~~yHG~t~-~~-ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~-- 197 (423)
T PRK05964 122 ALQYWRNRGEPGRSRFLSLRGGYHGDTI-GT-MSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHA-- 197 (423)
T ss_pred HHHHHHhcCCCCCcEEEEEcCCcCCccH-HH-HhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCC--
Confidence 8642 2 2356655554433221 11 111110 1122222211 1112778888886321
Q ss_pred ccCCceeEEEEeccccCCCceec-ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh--HhhhcCccEEEEecccc
Q 018240 132 IVYPTTRLICLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV--RRLVQAADSASVCLSKG 208 (359)
Q Consensus 132 ~~~~~~~~v~i~~~~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~~d~~~~s~~K~ 208 (359)
.++.+|++++.....+|... +.+++++|.++|++||+++|+||+|... +..|... ......+|++ +++|+
T Consensus 198 ---~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~--gr~G~~~a~~~~~v~pDi~--~~~K~ 270 (423)
T PRK05964 198 ---GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGF--GRTGTLFACEQAGVSPDIM--CLSKG 270 (423)
T ss_pred ---CcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCC--CcCcchhHHHhcCCCCCee--eeehh
Confidence 57889999884333566654 7899999999999999999999998422 2223221 1122245655 55699
Q ss_pred CCCc-ee-eEEecCHHHHHHHHHH----HHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcCCCce
Q 018240 209 LGAP-VG-SVIVGSKEFIKKARRL----RKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQLKGLR 281 (359)
Q Consensus 209 ~g~~-~g-g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~~g~~ 281 (359)
++++ .. |+++.++++.+.+... ....+.++..+++.++++..+++...+ +..++..++.+++++.|+++....
T Consensus 271 l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~ 350 (423)
T PRK05964 271 LTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPFRDLP 350 (423)
T ss_pred hhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhccCC
Confidence 9654 22 6688899998886421 112344555567777777777764332 366777788888888887653222
Q ss_pred Ee-cCCccceEEEEEeccchH-HHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 282 VD-VDAVETNIVYFEITEDSK-LYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 282 ~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.. .....+.++.+.+..+.. .....+.+.|.++||.+.+.+ +.+|++++..++++|+|+++++++++++++
T Consensus 351 ~i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~~-~~lR~~p~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 351 GVADVRVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPLG-NTIYLMPPYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred CeEEeecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEecC-CEEEEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence 11 113356666677754210 135688899999999997754 689999999999999999999999998763
No 251
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.94 E-value=5.3e-24 Score=183.52 Aligned_cols=312 Identities=20% Similarity=0.192 Sum_probs=200.5
Q ss_pred HHHHHHHHHcCCCCC--------CccCCChHHHHHH----HHHHHHhCCC----Ce-EEcCCchHHHHHHHHHhhhhcCC
Q 018240 17 TEAMRAAMASAEVDD--------DVLMHDPTAFRLE----TEMAKVMGKE----AG-LFVPSGTMGNLISVLVHCETRGS 79 (359)
Q Consensus 17 ~~~~~~a~~~~~~~~--------~~~~~~~~~~~l~----~~la~~~~~~----~~-~~~~~gt~a~~~~l~~~~~~~g~ 79 (359)
+|.+++++.....+. ..|+..+..+++| ++++++|+.+ .+ +-..||+.|+..++.+++ +|||
T Consensus 33 Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl-~pGD 111 (399)
T PF00464_consen 33 SPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALL-KPGD 111 (399)
T ss_dssp -HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT--TT-
T ss_pred CHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHH-hhcC
Confidence 477888876643321 2455566665544 5577889998 54 778899999999999999 6999
Q ss_pred eEEecCCCcceeecccccccc-----C--CccceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018240 80 EVILGDNSHIHIYENGGISTI-----G--GVHPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~~-----~--g~~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
+|+..+..|+.....+..... . ..+.+.++.+ +++.+|.+++++.+++ .++++|++.. .++|
T Consensus 112 ~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~-------~kPklIi~G~-S~y~-- 181 (399)
T PF00464_consen 112 TIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKE-------HKPKLIICGA-SSYP-- 181 (399)
T ss_dssp EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHH-------H--SEEEEE--SSTS--
T ss_pred cEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhh-------cCCCEEEECc-hhcc--
Confidence 999877776655432322222 2 2345566666 6789999999999996 6899999943 3323
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecC-----------
Q 018240 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGS----------- 220 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~----------- 220 (359)
..+ ++++++++|++.|+++++|.+|..|... .+.-..++. .+|+++.|.||+|.+|.||+++.+
T Consensus 182 ~~~---d~~~~reIad~vga~l~~D~sH~~GLIa-~g~~~~P~~-~ADvvt~sThKtl~GPrggiI~~~~~~~~~~~~~~ 256 (399)
T PF00464_consen 182 RPI---DFKRFREIADEVGAYLMADISHIAGLIA-GGLFPNPFP-YADVVTGSTHKTLRGPRGGIILTNKGSKNVDKKGK 256 (399)
T ss_dssp S------HHHHHHHHHHTT-EEEEE-TTTHHHHH-TTSS--GCC-TSSEEEEESSGGG-SSS-EEEEES-SEEEE-TTS-
T ss_pred Ccc---CHHHHHHHHHhcCcEEEeccccccccee-hheecCccc-cceEEEeeccccccccCceEEEEcCCccccCCccc
Confidence 333 4799999999999999999999777664 344445554 699999999999999999999988
Q ss_pred ---HHHHHHHHHHHHhhCCCcchhHHHHHHH---HHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEE
Q 018240 221 ---KEFIKKARRLRKTLGGGMRQVGVLCAAA---LVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYF 294 (359)
Q Consensus 221 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~ 294 (359)
+++.+++.........+......+++.+ ..++....++..++..++++.|.+.|.+. |+.+.........+++
T Consensus 257 ~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~~ggTd~H~vlv 335 (399)
T PF00464_consen 257 EIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQER-GFKVVTGGTDNHQVLV 335 (399)
T ss_dssp EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS-SSSEEEE
T ss_pred ccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhC-CcEEEECCCCCCeEEE
Confidence 7788877643322111111122222222 22222223447888999999999999999 9999876778888999
Q ss_pred EeccchHHHHHHHHHHHHhcCcee----ccCC-----CcEEEEEe----CCCCCHHHHHHHHHHH
Q 018240 295 EITEDSKLYAACLLKKLEEHGVLV----MPES-----STRVRIVV----HHQISANDVHYTLSCF 346 (359)
Q Consensus 295 ~~~~~~~~~~~~~~~~l~~~gi~~----~~~~-----~~~lRi~~----~~~~~~~~i~~~~~~l 346 (359)
.+.. .+.++.+..+.|.+.||.+ .|+. ...|||.. ..++.++|++++.+.|
T Consensus 336 d~~~-~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 336 DLRS-FGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAELI 399 (399)
T ss_dssp EGGG-GTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred Eecc-cccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhhC
Confidence 9876 4568888889999999988 3432 45799974 3467788888887654
No 252
>PLN02880 tyrosine decarboxylase
Probab=99.94 E-value=6.4e-24 Score=191.62 Aligned_cols=311 Identities=18% Similarity=0.177 Sum_probs=202.1
Q ss_pred cCCChHHHHHHHH----HHHHhCCCC---------eEEcCCchHHHHHHHHHhhhh----------cCCeEEecCCCcce
Q 018240 34 LMHDPTAFRLETE----MAKVMGKEA---------GLFVPSGTMGNLISVLVHCET----------RGSEVILGDNSHIH 90 (359)
Q Consensus 34 ~~~~~~~~~l~~~----la~~~~~~~---------~~~~~~gt~a~~~~l~~~~~~----------~g~~vl~~~~~~~~ 90 (359)
+..+|...++|+. +++++|.+. ++++++||+|++.++..++.+ +.-.|++++.+|++
T Consensus 114 ~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~S 193 (490)
T PLN02880 114 WITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSA 193 (490)
T ss_pred cccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHH
Confidence 4445655555555 666677763 588999999999999988642 11246679999999
Q ss_pred eeccccccccCCc---cceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHH
Q 018240 91 IYENGGISTIGGV---HPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEI 165 (359)
Q Consensus 91 ~~~~~~~~~~~g~---~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~ 165 (359)
..+ + +...|+ .++.|+.+. ++.+|++.|++.|++.... ...-++++.+...+.||.+-| +++|.++
T Consensus 194 v~K-a--a~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~---g~~p~~vvataGTT~~GaiDp---l~eI~~i 264 (490)
T PLN02880 194 LQK-A--CQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSS---GLIPFFLCATVGTTSSTAVDP---LLELGKI 264 (490)
T ss_pred HHH-H--HHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHC---CCccEEEEEecCCCcCcccCc---HHHHHHH
Confidence 887 3 666666 366777753 6789999999999742211 122344444777778898766 8999999
Q ss_pred HHHcCcEEEEecccccchhhhcCchhHhh---hcCccEEEEeccccCCCcee-eEEecC-HHH-HHHHHHHHHhhC----
Q 018240 166 AKKHGLKLHIDGARIFNAAVALGVPVRRL---VQAADSASVCLSKGLGAPVG-SVIVGS-KEF-IKKARRLRKTLG---- 235 (359)
Q Consensus 166 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~~d~~~~s~~K~~g~~~g-g~~~~~-~~~-~~~~~~~~~~~~---- 235 (359)
|++||+|+|||+||+.+... ....... ...+|.+++++|||++.|.+ |+++.+ +.. .+.+.....+..
T Consensus 265 ~~~~~iwlHVDaA~gg~~~~--~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~ 342 (490)
T PLN02880 265 AKSNGMWFHVDAAYAGSACI--CPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKAS 342 (490)
T ss_pred HHHcCCEEEEehhhHHHHHh--CHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccc
Confidence 99999999999997554433 1111111 24789999999999999988 666654 222 222211111100
Q ss_pred --------------CCcchhHHHHHHHHHHH-HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccch
Q 018240 236 --------------GGMRQVGVLCAAALVAL-QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDS 300 (359)
Q Consensus 236 --------------~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 300 (359)
.+.+...+-.++.+..+ .+...++.++..++++++.+.|++.|++++..+ ...++++|++++..
T Consensus 343 ~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~-~~~~iv~Fr~~~~~ 421 (490)
T PLN02880 343 QANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTP-RIFSLVCFRLVPPK 421 (490)
T ss_pred cccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC-CceEEEEEEEeCCC
Confidence 00000112222222222 233444677777999999999999999998654 46778888876420
Q ss_pred ------HHHHHHHHHHHHhcCcee-c---cCCCcEEEEEe-CCCCCHHHHHHHHHHHHHHHHHHHhh
Q 018240 301 ------KLYAACLLKKLEEHGVLV-M---PESSTRVRIVV-HHQISANDVHYTLSCFQKIYAGVCEE 356 (359)
Q Consensus 301 ------~~~~~~~~~~l~~~gi~~-~---~~~~~~lRi~~-~~~~~~~~i~~~~~~l~~~~~~~~~~ 356 (359)
..-..++.++|.+.|-.. . -.+..++|+++ .+..++++++.+++.|.+..+++..+
T Consensus 422 ~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~~ 488 (490)
T PLN02880 422 NNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLGK 488 (490)
T ss_pred CChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 011235666665455443 2 23577899996 44556799999999999998887653
No 253
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.94 E-value=3e-24 Score=194.70 Aligned_cols=283 Identities=18% Similarity=0.224 Sum_probs=192.9
Q ss_pred HHHHHHHHHHHhCCCCe--EEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCCC
Q 018240 40 AFRLETEMAKVMGKEAG--LFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGTM 116 (359)
Q Consensus 40 ~~~l~~~la~~~~~~~~--~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~ 116 (359)
..++++.+++++|.+.. +++++|++++..++.++...++++|+++++.|.+..... ..+...|++++.++.+++ .+
T Consensus 114 ~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~ 192 (447)
T PRK00451 114 IFEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VT 192 (447)
T ss_pred HHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CC
Confidence 34555778999998743 567777777767666664358899999999987765411 012236889999988777 89
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEE--ecccccchhhhcCchhHhh
Q 018240 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHI--DGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~--D~a~~~~~~~~~~~~~~~~ 194 (359)
|++++++.++ +++++|+++++ |+||.+.+ +++|.++|+++|+++++ |.+ ..+... ...
T Consensus 193 d~~~l~~~i~--------~~t~~v~l~~p--n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~-~~g~~~----~~~-- 252 (447)
T PRK00451 193 DLEALEAAVD--------DDTAAVVVQYP--NFFGVIED---LEEIAEIAHAGGALFIVGVDPV-SLGLLK----PPG-- 252 (447)
T ss_pred CHHHHHHhcC--------CCeEEEEEECC--CCCCeeCC---HHHHHHHHHHCCCEEEEEcChH-HhccCC----Ccc--
Confidence 9999999998 78999999765 58999866 89999999999999998 543 122111 111
Q ss_pred hcCccEEEEecccc-----CCCceeeEEecCHHHHHHHHH-------------------------HHH-hhCCCcchh-H
Q 018240 195 VQAADSASVCLSKG-----LGAPVGSVIVGSKEFIKKARR-------------------------LRK-TLGGGMRQV-G 242 (359)
Q Consensus 195 ~~~~d~~~~s~~K~-----~g~~~gg~~~~~~~~~~~~~~-------------------------~~~-~~~~~~~~~-~ 242 (359)
..++|+++.|.+|+ +++|..|+++.++++.+.+.. .+. ....+.... .
T Consensus 253 ~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (447)
T PRK00451 253 EYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQA 332 (447)
T ss_pred cCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHH
Confidence 23789998876775 565655888888888776310 000 001111111 1
Q ss_pred HHHHHH---HHHH-HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEE--EEEeccchHHHHHHHHHHHHhcCc
Q 018240 243 VLCAAA---LVAL-QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIV--YFEITEDSKLYAACLLKKLEEHGV 316 (359)
Q Consensus 243 ~~~~~~---~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~gi 316 (359)
....++ +..+ +...++..+++.++++++.+.|++++++++. . ...+. .+.++. +..++.++|.++||
T Consensus 333 ~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~--~~~~~~~~v~~~~----~~~~~~~~L~~~gi 405 (447)
T PRK00451 333 LNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELF-D--GPFFNEFVVRLPK----PAEEVNEALLEKGI 405 (447)
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec-C--CCeEEEEEEecCC----CHHHHHHHHHhcCC
Confidence 111112 1222 3455667788999999999999999888874 2 22332 244432 46789999988888
Q ss_pred ee-c------cCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 317 LV-M------PESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 317 ~~-~------~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
.+ . +....++|++++..+++++++++++.|++++
T Consensus 406 ~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 406 LGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred CCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 64 1 1223589999998899999999999998764
No 254
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.94 E-value=4.1e-24 Score=188.79 Aligned_cols=323 Identities=13% Similarity=0.042 Sum_probs=214.8
Q ss_pred ccccccccCCCCCChHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhCCCC---eEEcC-CchHHHHHHHHHhhh
Q 018240 2 VTRTVDLRSDTVTKPTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMGKEA---GLFVP-SGTMGNLISVLVHCE 75 (359)
Q Consensus 2 ~~~~id~~~~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~~~~---~~~~~-~gt~a~~~~l~~~~~ 75 (359)
++..+.|..+....++..+++++.+...+ +..........+.++.++++++.+. .++++ |||.++..++..++
T Consensus 10 ~~~~~~f~~Gp~~~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~- 88 (378)
T PRK03080 10 RPADPRFSSGPCKKRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLL- 88 (378)
T ss_pred CCCCCCcCCCCcCCChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcC-
Confidence 34456676665555544499999875443 2222224556888999999999742 45565 89999999999887
Q ss_pred hcCCeEEecCCCcceeecccc-ccccCCc-cceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee
Q 018240 76 TRGSEVILGDNSHIHIYENGG-ISTIGGV-HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC 153 (359)
Q Consensus 76 ~~g~~vl~~~~~~~~~~~~~~-~~~~~g~-~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~ 153 (359)
++++.+++....|...+. . ..+..|. ++..++.+.++.+|+++ ++ . ++.|.+++..+ .||..
T Consensus 89 ~~~~~~vi~~g~f~~~~~--~~~~~~~g~~~v~~~~~~~g~~~d~~~----i~--------~-~~~V~~~h~~t-~tG~~ 152 (378)
T PRK03080 89 GARRVDHLAWESFGSKWA--TDVVKQLKLEDPRVLEADYGSLPDLSA----VD--------F-DRDVVFTWNGT-TTGVR 152 (378)
T ss_pred CCCcceEEEeCHHHHHHH--HHHHhhcCCCCceEeccCCCCCCCHhh----cC--------C-CCCEEEEecCC-cccee
Confidence 344444455667666554 2 2355688 88888766666677665 33 2 34577755444 89999
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHH
Q 018240 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRK 232 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~ 232 (359)
.| +++|++ +++|+++++|.+|++|... ..+. ..|++++|.+||+++|.| |+++.+++..+++.....
T Consensus 153 ~p---i~~I~~--~~~g~~~vVDa~qs~G~~p---idv~----~iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~ 220 (378)
T PRK03080 153 VP---VARWIG--ADREGLTICDATSAAFALP---LDWS----KLDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTP 220 (378)
T ss_pred cc---chhhcc--ccCCCeEEEecccccccCC---CCHH----HCcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccC
Confidence 98 677777 7899999999999887664 2222 269999999999998888 999999988877553210
Q ss_pred -------------------hh-CCCcchhHHHHH----HHHHHH-HH-hHHHHhhhHHHHHHHHHHHHhcCCCceEecC-
Q 018240 233 -------------------TL-GGGMRQVGVLCA----AALVAL-QE-NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVD- 285 (359)
Q Consensus 233 -------------------~~-~~~~~~~~~~~~----~~~~~l-~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~- 285 (359)
.+ +.+...++.... .++..+ +. ..+.+.++..++.+++++.|++++++.+...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~ 300 (378)
T PRK03080 221 ARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVAD 300 (378)
T ss_pred CCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCC
Confidence 01 111111222221 122223 22 4555667788889999999999866665422
Q ss_pred C-ccc-eEEEEEeccc-hHHHHHHHHHHHHhcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 286 A-VET-NIVYFEITED-SKLYAACLLKKLEEHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 286 ~-~~~-~~~~~~~~~~-~~~~~~~~~~~l~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+ ..+ .++.+.++.. .+.+. ++...|.++||.+..++ .+.+|++++.+++++|++.++++|++++++++
T Consensus 301 ~~~~s~~i~~~~~~~~~~~~~~-~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~ 375 (378)
T PRK03080 301 PATRSNTSVTLDFVDAQAAVDA-AAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERLK 375 (378)
T ss_pred ccccCccEEEEEcCCchHHHHH-HHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 1 223 4566666541 02233 46667766788775432 46799999999999999999999999988765
No 255
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.94 E-value=7e-24 Score=190.03 Aligned_cols=335 Identities=18% Similarity=0.187 Sum_probs=223.4
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC---ccCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHHh
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD---VLMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~~ 73 (359)
.+++||.++ +....+|++.+++.+...... .+...+...++.+.+++.+.. +.+.+++||++|+..+++.+
T Consensus 82 ~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklA 161 (459)
T PRK11522 82 QEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLA 161 (459)
T ss_pred CEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHH
Confidence 357899887 334555899988887554322 233467778888889888753 35688999999999999988
Q ss_pred hhhc---C-CeEEecCC-CcceeeccccccccCCcc------------ceeeecCCCCCCCHHHHHHHhcCCCCCccCCc
Q 018240 74 CETR---G-SEVILGDN-SHIHIYENGGISTIGGVH------------PRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPT 136 (359)
Q Consensus 74 ~~~~---g-~~vl~~~~-~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 136 (359)
.... | .+|+.... +|..+.. . ....+.. +..++.+ |.+.+++.+++... +..+
T Consensus 162 r~~t~~~gr~~ii~~~~~yHG~t~~--~-ls~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~~--~~~~ 231 (459)
T PRK11522 162 KAYQSPRGKFTFIATSGAFHGKSLG--A-LSATAKSTFRKPFMPLLPGFRHVPFG-----NIEAMRTALSECKK--TGDD 231 (459)
T ss_pred HHHhccCCCcEEEEecCCCCCCcHH--H-hhhcCCcccccCCCCCCCCCcccCCC-----CHHHHHHHHHHhhc--cCCc
Confidence 7533 2 24665554 4444322 1 2222211 1112222 77888888863211 1146
Q ss_pred eeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEeccccCCC--
Q 018240 137 TRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSKGLGA-- 211 (359)
Q Consensus 137 ~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~g~-- 211 (359)
+.+|++++...+ .|. ..|.+++++++++|++||+++|+||+|.. ++..|.. ...+.-.+|++ +++|.+|+
T Consensus 232 iAavIvEpv~g~-~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG--~GRtG~~~a~e~~gv~PDiv--t~gK~lggG~ 306 (459)
T PRK11522 232 VAAVILEPIQGE-GGVILPPEGYLTAVRKLCDEFGALLILDEVQTG--MGRTGKMFACEHENVQPDIL--CLAKALGGGV 306 (459)
T ss_pred EEEEEEecccCC-CCCccCCHHHHHHHHHHHHHcCCEEEeccceec--CCccchhhhhhccCCCCCEE--EechhhhCCC
Confidence 889999999885 456 45679999999999999999999999842 2223332 11122246765 66798864
Q ss_pred -ceeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC----CCceEecC
Q 018240 212 -PVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL----KGLRVDVD 285 (359)
Q Consensus 212 -~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~----~g~~~~~~ 285 (359)
|.|+++ .++++.+.+......++.++..+++.++++...++...+ +..++..++.++|++.|+++ |..-.. -
T Consensus 307 ~Pigav~-~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~-V 384 (459)
T PRK11522 307 MPIGATI-ATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQE-A 384 (459)
T ss_pred ccceeEE-EcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhCCCceee-E
Confidence 555644 556776654321123455666677888888888865543 35667778888888888764 211111 1
Q ss_pred CccceEEEEEeccchHHHHHHHHHHHHhcCceeccC--CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 018240 286 AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE--SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCEE 356 (359)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~--~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 356 (359)
...+.++.+.+..+ .....+.+.|.++||.+.+. +...+|+.++..++++|+++++++|+++++++.+.
T Consensus 385 rG~Gl~~giel~~~--~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~~~ 455 (459)
T PRK11522 385 RGKGMLMAIEFVDN--EIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKALAAMRVS 455 (459)
T ss_pred EeceeEEEEEecCc--hHHHHHHHHHHHCCeEEEecCCCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHHh
Confidence 24677777877652 24667889999999998654 45789999999999999999999999999887654
No 256
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.94 E-value=4.4e-24 Score=190.48 Aligned_cols=283 Identities=22% Similarity=0.242 Sum_probs=196.6
Q ss_pred CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCC
Q 018240 36 HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDG 114 (359)
Q Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 114 (359)
..|...++++.+++++|.+.+++++||+.|+..++.+++ ++|++|+++.+.|.+.+... ..+...|++++.++.+
T Consensus 55 ~~p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~~l~-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~--- 130 (418)
T TIGR01326 55 MNPTTDVLEQRIAALEGGVAALAVASGQAAITYAILNLA-QAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPD--- 130 (418)
T ss_pred CChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHh-CCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCC---
Confidence 357789999999999999889999999999999999888 59999999999876544200 2245678888888653
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh
Q 018240 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
|++++++.++ +++++|+++++ +||+|.+.+ +++|.++|+++|+++|+|++++.+. . ..++
T Consensus 131 --d~~~l~~~l~--------~~t~~V~le~p-~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~---~---~~~l 190 (418)
T TIGR01326 131 --DPEEFEKAID--------ENTKAVFAETI-GNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPY---L---CRPI 190 (418)
T ss_pred --CHHHHHHhcC--------cCCeEEEEECC-CCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhh---c---CCch
Confidence 8999999998 68899999765 569999887 8999999999999999999975331 1 1223
Q ss_pred hcCccEEEEeccccCCCc---eeeEEecCHHHH-------------------------------HHHH-HHHHhhCCCcc
Q 018240 195 VQAADSASVCLSKGLGAP---VGSVIVGSKEFI-------------------------------KKAR-RLRKTLGGGMR 239 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~---~gg~~~~~~~~~-------------------------------~~~~-~~~~~~~~~~~ 239 (359)
..++|+++.|++|+++++ .||+++.++.+. .+.+ ......|...
T Consensus 191 ~~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~- 269 (418)
T TIGR01326 191 DHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPSYHGLVFTETFGNPAFIVKARVQLLRDLGAAL- 269 (418)
T ss_pred hcCCeEEEECccccccCCccceEEEEEecccccccccccccccCCCCccccchhhhhhchhhHHHHHHHHHHHhcCCCC-
Confidence 347899999999999864 345455332211 0111 1222334444
Q ss_pred hhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCce-EecC----------------CccceEEEEEeccchHH
Q 018240 240 QVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLR-VDVD----------------AVETNIVYFEITEDSKL 302 (359)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~----------------~~~~~~~~~~~~~~~~~ 302 (359)
++..++.....++.... ++++..+++..+.+.|.+.|++. +..| ...+..+.|.+.. ...
T Consensus 270 -~p~~a~~~~~~l~tl~~-R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~~~~~~~~~~~~~~g~g~~~s~~l~~-~~~ 346 (418)
T TIGR01326 270 -SPFNAFLLLQGLETLSL-RMERHVENALKVAEFLEAHPKVAWVNYPGLASHPHHALAKKYLPKGFGAVLSFEIKG-GRE 346 (418)
T ss_pred -CHHHHHHHHCCcccHHH-HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhccCCCcceEEEEecC-CHH
Confidence 45555555666655544 66777788899999999887664 2222 1245577788864 223
Q ss_pred HHHHHHHHHHhcCceeccC---------------------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 303 YAACLLKKLEEHGVLVMPE---------------------------SSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~~~~---------------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
...+|.+.|+--.+.+.-| .++.||+++. + |+.+++++.|.+++
T Consensus 347 ~~~~f~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svG--l--E~~~dl~~dl~~Al 417 (418)
T TIGR01326 347 AGKKFIDALKLASHLANVGDAKSLVIHPASTTHQQLSEEEQLKAGVTPGLIRLSVG--I--ENIDDIIADLEQAL 417 (418)
T ss_pred HHHHHHHhCCcceeccccCCCCceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEec--C--CCHHHHHHHHHHhh
Confidence 4667777774333321111 2346999995 3 57888888887765
No 257
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.94 E-value=1.9e-23 Score=181.68 Aligned_cols=314 Identities=16% Similarity=0.149 Sum_probs=211.3
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCc---cCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDV---LMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.+++||.++ +....+|++.+++.+....... ....+...++.+.++++.+.+..++++||++|+..+++.+..
T Consensus 24 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~SGseA~e~Alklar~ 103 (364)
T PRK04013 24 RRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWVNYEYVYMGNSGTEAVEAALKFARL 103 (364)
T ss_pred CEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhcCCCEEEEeCchHHHHHHHHHHHHH
Confidence 357899876 3455568888888875543211 123566788999999998888889999999999999999886
Q ss_pred hcC-CeEEecCCCcceeeccccccccCC-------cc-----ceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEE
Q 018240 76 TRG-SEVILGDNSHIHIYENGGISTIGG-------VH-----PRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICL 142 (359)
Q Consensus 76 ~~g-~~vl~~~~~~~~~~~~~~~~~~~g-------~~-----~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i 142 (359)
.+| ++|+..+.+|..... +. ....+ .. +..++.+ |.+.+++.++ +++++|++
T Consensus 104 ~~gr~~Ii~~~~syHG~t~-~~-ls~~~~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~i~--------~~~aAviv 168 (364)
T PRK04013 104 YTGRKEIIAMTNAFHGRTM-GA-LSATWKPKYREDFEPLVPGFKHIPFN-----DVEAAKEAIT--------KETAAVIF 168 (364)
T ss_pred HhCCCEEEEECCccccCch-hh-ccCCCCcccccCCCCCCCCcEEecCC-----CHHHHHHHhc--------CCcEEEEE
Confidence 566 677766665544432 11 22111 11 1122222 7888998887 68999999
Q ss_pred eccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEeccccCCC--ceeeEE
Q 018240 143 ENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSKGLGA--PVGSVI 217 (359)
Q Consensus 143 ~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~g~--~~gg~~ 217 (359)
++...+ +|. ..|.++++++.++|++||+++|+||++.. .. .|.. ...+.-.+|++++ +|.+++ |.++++
T Consensus 169 Epi~g~-gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG-~R--tG~~~a~~~~gv~PDiv~~--gK~lggG~P~~a~~ 242 (364)
T PRK04013 169 EPIQGE-GGIVPAKEEFVKTLRDLTEDVGALLIADEVQSG-LR--TGKFLAIEHYKVEPDIVTM--GKGIGNGVPVSLTL 242 (364)
T ss_pred cCCcCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEechhhc-CC--CCchhHHHhcCCCCCEEEe--cccccCCceeEEEE
Confidence 998874 444 56679999999999999999999999853 22 2321 2222235676655 687743 455544
Q ss_pred ecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEec
Q 018240 218 VGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEIT 297 (359)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~ 297 (359)
.++++. ....++++..+++.++++...++...++ ...++.+...+.+.. |.+.- -...+.++-+.+.
T Consensus 243 -~~~~~~------~~~~~~T~~gnp~~~aaa~a~l~~i~~~---~l~~~~~~~l~~l~~-~~v~~--vRG~Gl~~gve~~ 309 (364)
T PRK04013 243 -TNFDVE------RGKHGSTFGGNPLACKAVAVTLRILRRE---RLVEKAGEKFIEIKG-ERVVT--TRGRGLMIGIVLK 309 (364)
T ss_pred -eccccc------CCCcCCCCCcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHhcc-Cccee--eeeCcEEEEEEeC
Confidence 444431 1235566777788888888888765442 122222111122322 22221 1346677777776
Q ss_pred cchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 298 EDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 298 ~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
. ....+.+.+.++|+.+.+.+.+.+|+.++..++++++++++++|+++++++.
T Consensus 310 ~----~~~~i~~~~~~~Gll~~~~g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 310 K----PVGKYVEELQNRGYLVHTAGQRVIRLLPPLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred C----cHHHHHHHHHhCCcEEeeCCCCEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence 5 2457888899999999887778999999999999999999999999998764
No 258
>PLN03032 serine decarboxylase; Provisional
Probab=99.94 E-value=3.3e-24 Score=185.96 Aligned_cols=286 Identities=19% Similarity=0.204 Sum_probs=202.3
Q ss_pred hHHHHHHHHHHHHhCCCC----eEEcCCchHHHHHHHHHhhh-hcCCeEEecCCCcceeeccccccccCCccceeeecCC
Q 018240 38 PTAFRLETEMAKVMGKEA----GLFVPSGTMGNLISVLVHCE-TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ 112 (359)
Q Consensus 38 ~~~~~l~~~la~~~~~~~----~~~~~~gt~a~~~~l~~~~~-~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 112 (359)
+...++++.+++++|.+. ++++++||+|++.++..+.. .++..|+++...|++..+ + ++..|..+..++.+.
T Consensus 66 ~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~k-a--a~~lg~~~~~V~~d~ 142 (374)
T PLN03032 66 QFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFK-A--ARMYRMEAVKVPTLP 142 (374)
T ss_pred HHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHH-H--HHHcCCCCeEeeeCC
Confidence 445777788999999863 38999999999999987763 244589999999999887 3 677788888899899
Q ss_pred CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcC-----cEEEEecccccchhhhc
Q 018240 113 DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHG-----LKLHIDGARIFNAAVAL 187 (359)
Q Consensus 113 ~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~-----~~li~D~a~~~~~~~~~ 187 (359)
+|.+|+++|++.+++.. .++.+|++ +..+|++|.+-| +++|.++|+++| +++++|.|++.+..+..
T Consensus 143 ~g~id~~~L~~~i~~~~-----~~~~lvv~-tagtt~tG~idp---i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~ 213 (374)
T PLN03032 143 SGEIDYDDLERALAKNR-----DKPAILNV-NIGTTVKGAVDD---LDRILRILKELGYTEDRFYIHCDGALFGLMMPFV 213 (374)
T ss_pred CCcCcHHHHHHHHHHcC-----CCCEEEEE-EecCcCCccCCC---HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhcc
Confidence 99999999999998410 24666666 567779999866 899999999996 58999999866555432
Q ss_pred C-chhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHHhhC-----CCcchhHHHHHHHHHHH----HHhH
Q 018240 188 G-VPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRKTLG-----GGMRQVGVLCAAALVAL----QENV 256 (359)
Q Consensus 188 ~-~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l----~~~~ 256 (359)
. .+..++...+|.+++|.||++|.|.| |+++.++...+.+.....+.. ...+.++...+..+..+ .+..
T Consensus 214 ~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~ 293 (374)
T PLN03032 214 SRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGI 293 (374)
T ss_pred CCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHH
Confidence 1 11112234689999999999988988 888887666554432112111 11111222233333333 3444
Q ss_pred HHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCH
Q 018240 257 LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISA 336 (359)
Q Consensus 257 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~ 336 (359)
.+..++..++++++.+.|++. ++++...| ..+.+.|.-+.. +. +. +|..+.+. +..+|+++.+.+++
T Consensus 294 ~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p-~~~~V~f~~~~~-----~~----~~-~~w~l~~~-~~~~hi~vm~~~~~ 360 (374)
T PLN03032 294 KRDVQHCMRNAHYLKDRLTEA-GLTCRLNE-LSSTVVFERPMD-----EA----FI-KKWQLACE-GDIAHVVVMPNVTV 360 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCcEEECC-CceEEEEcCCCc-----Hh----Hh-heeeeccc-CCEEEEEECCCCCH
Confidence 458888999999999999997 88875544 566666665531 11 22 46666443 35899999988999
Q ss_pred HHHHHHHHHHHH
Q 018240 337 NDVHYTLSCFQK 348 (359)
Q Consensus 337 ~~i~~~~~~l~~ 348 (359)
+.+|++++.|++
T Consensus 361 ~~id~fi~dl~~ 372 (374)
T PLN03032 361 EKLDEFVEELVE 372 (374)
T ss_pred HHHHHHHHHHhc
Confidence 999999988864
No 259
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.94 E-value=5.1e-24 Score=191.74 Aligned_cols=330 Identities=17% Similarity=0.153 Sum_probs=212.6
Q ss_pred cccccccCCC----CCChHHHHHHHHHcCCCCCCccC-CChHHHHHHHHHHHHhCC-CCeEEcCCchHHHHHHHHHhhh-
Q 018240 3 TRTVDLRSDT----VTKPTEAMRAAMASAEVDDDVLM-HDPTAFRLETEMAKVMGK-EAGLFVPSGTMGNLISVLVHCE- 75 (359)
Q Consensus 3 ~~~id~~~~~----~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~l~~~la~~~~~-~~~~~~~~gt~a~~~~l~~~~~- 75 (359)
.+++||.++. ....+|.+.+++.+.......|. .++...++.++|+++++. +..++++||++|+..+++.+..
T Consensus 48 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~ 127 (423)
T TIGR00713 48 NEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSYGAPTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGY 127 (423)
T ss_pred CEEEEccccccccccCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHh
Confidence 3578998863 33556889988887654433333 567789999999998864 3568899999999999997653
Q ss_pred hcCCeEEecCCCcceeecccccccc--CCc-----------------cceeeecCCCCCCCHHHHHHHhcCCCCCccCCc
Q 018240 76 TRGSEVILGDNSHIHIYENGGISTI--GGV-----------------HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPT 136 (359)
Q Consensus 76 ~~g~~vl~~~~~~~~~~~~~~~~~~--~g~-----------------~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 136 (359)
..+++|+..+++|..... ..... .+. ..+.++.+ |++++++.+++.. .+
T Consensus 128 ~gr~~ii~~~~~yhG~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~i~~~~-----~~ 195 (423)
T TIGR00713 128 TGRDKIIKFEGCYHGHHD--ALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYN-----DLEALEEVFEEYG-----EE 195 (423)
T ss_pred hCCCEEEEEcCCCCCChh--hhhccccCcccccCCCCCCCCCcccccceEEeCCC-----CHHHHHHHHHHcC-----Cc
Confidence 234678888877655332 01110 110 11112221 7899999887421 46
Q ss_pred eeEEEEeccccCCCceecC-hhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCce-e
Q 018240 137 TRLICLENTHANCGGRCLS-VEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV-G 214 (359)
Q Consensus 137 ~~~v~i~~~~~~ptG~~~~-~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~-g 214 (359)
+++|++++.++| +|.+.+ .+++++|+++|++||+++|+||+|... ..........+...+|+ .+++|.++.+. .
T Consensus 196 ~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~-r~g~~~~~~~~~~~pDi--~t~sK~l~~G~pi 271 (423)
T TIGR00713 196 IAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGF-RVALGGAQEYFGVEPDL--TTLGKIIGGGLPV 271 (423)
T ss_pred EEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccc-ccCcchhHHHhCCCcch--hhhhhhhcCCCce
Confidence 889999988887 687777 599999999999999999999998432 21111111112224564 37899997432 3
Q ss_pred eEEecCHHHHHHHHHHH-HhhCCCcchhHHHHHHHHHHHHHhH-----HHHhhhHHHHHHHHHHHHhcCCCceEecCCcc
Q 018240 215 SVIVGSKEFIKKARRLR-KTLGGGMRQVGVLCAAALVALQENV-----LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVE 288 (359)
Q Consensus 215 g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 288 (359)
|++++++++++.+.... ...+.++..+++.++++..+++... +...+...+.++.|.+.+++. ++..... ..
T Consensus 272 g~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~-~~ 349 (423)
T TIGR00713 272 GAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDT-GIPHTVN-RV 349 (423)
T ss_pred eeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEE-ee
Confidence 77888989888865321 1233445566777777777775332 222333334445555555555 5543222 24
Q ss_pred ceEEEEEeccc-----------hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 289 TNIVYFEITED-----------SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 289 ~~~~~~~~~~~-----------~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
+.++.+.+..+ +......+.+.|.++||.+.+.+...+|+++ .++++++++++++|.+++++
T Consensus 350 g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~l~~--~~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 350 GSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQFEACFLSA--AHTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred ccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCCccceeeEC--CCCHHHHHHHHHHHHHHHhh
Confidence 45544444311 0112346888888899998665545688877 48999999999999998865
No 260
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.94 E-value=5.3e-24 Score=188.36 Aligned_cols=326 Identities=17% Similarity=0.221 Sum_probs=210.8
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC---ccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD---VLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.+++||.++ +....+|++.+++.+...... .....+...++.+.+++..+.+..++++||++|+..++..+..
T Consensus 36 ~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik~ar~ 115 (395)
T PRK03715 36 KRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSPAFYNEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIKLARK 115 (395)
T ss_pred CEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHHHHHH
Confidence 467999863 444556889888877543211 1112344455555555554456679999999999999998863
Q ss_pred h-----cC-CeEEe-cCCCcceeeccccccccCCcccee---eecCCC----CCCCHHHHHHHhcCCCCCccCCceeEEE
Q 018240 76 T-----RG-SEVIL-GDNSHIHIYENGGISTIGGVHPRT---VKNNQD----GTMDIDLIEAAIRDPKGEIVYPTTRLIC 141 (359)
Q Consensus 76 ~-----~g-~~vl~-~~~~~~~~~~~~~~~~~~g~~~~~---v~~~~~----~~~~~~~l~~~l~~~~~~~~~~~~~~v~ 141 (359)
. ++ .+|+. ....|.++.. + ....+..... .+.... ...|++.+++.++ +++++|+
T Consensus 116 ~~~~~~~~r~~ii~~~~~yHG~t~~--~-~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~--------~~~aavi 184 (395)
T PRK03715 116 WGRKHKNGAYEIITFDHSFHGRTLA--T-MSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT--------DKTVAVM 184 (395)
T ss_pred HhhccCCCCcEEEEECCCcCCChHH--H-HhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcC--------CCceEEE
Confidence 1 12 34554 4455655543 1 2333322110 011000 0137889998887 5788999
Q ss_pred EeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh--HhhhcCccEEEEeccccCCC--ceeeE
Q 018240 142 LENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV--RRLVQAADSASVCLSKGLGA--PVGSV 216 (359)
Q Consensus 142 i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~~d~~~~s~~K~~g~--~~gg~ 216 (359)
+++..+ .+|.. .|.+++++++++|++||+++|+||+|.. ++..|... ..+...+|++ +++|.+|+ |.|+
T Consensus 185 ~Epv~~-~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG--~GRtG~~~a~~~~gv~PDi~--t~gK~lg~G~p~~a- 258 (395)
T PRK03715 185 LEPVQG-EGGVIPATREFMQQLRALTKQHGLLLIVDEVQTG--CGRTGTLFAYELSGIEPDIM--TLGKGIGGGVPLAA- 258 (395)
T ss_pred EeCCcC-CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCCCcchhhHhhcCCCCcee--eehhhhhCCcceEE-
Confidence 998877 56665 4679999999999999999999999862 33334322 1222256764 55699865 4445
Q ss_pred EecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC---CCceEecCCccceEE
Q 018240 217 IVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL---KGLRVDVDAVETNIV 292 (359)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~~~~~~ 292 (359)
+++++++... .....+.++..+++.++++..+++...+ +.+++..++.++|++.|+++ .++... ...+.++
T Consensus 259 v~~~~~i~~~---~~~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~i~~v--rG~Glm~ 333 (395)
T PRK03715 259 LLAKAEVAVF---EAGDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSEERGLEGE--RGEGLLR 333 (395)
T ss_pred EEEccccccc---cCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcCCcCeE--EcceeEE
Confidence 4566666421 1123355556677788888888865543 36677778888888888764 133321 3467777
Q ss_pred EEEeccchHHHHHHHHHHHHhc---CceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 293 YFEITEDSKLYAACLLKKLEEH---GVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~l~~~---gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.+.+..+ ....+.+.+.+. ||.+.+.....+|++++..++++++++++++|+++++++
T Consensus 334 ~i~l~~~---~~~~~~~~~~~~~~~Gi~~~~~~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 334 ALLLGKD---IGPQIVEKARDMQPDGLLLNAPRPNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred EEEecCc---hHHHHHHHHHhccCCCEEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 7777652 234555555555 999866566889999999999999999999999998765
No 261
>PLN02271 serine hydroxymethyltransferase
Probab=99.94 E-value=1.1e-23 Score=186.11 Aligned_cols=314 Identities=19% Similarity=0.158 Sum_probs=217.5
Q ss_pred HHHHHHHHHcCCCC--------CCccCCChHHHHHH----HHHHHHhCCCC-----eEEcCCchHHHHHHHHHhhhhcCC
Q 018240 17 TEAMRAAMASAEVD--------DDVLMHDPTAFRLE----TEMAKVMGKEA-----GLFVPSGTMGNLISVLVHCETRGS 79 (359)
Q Consensus 17 ~~~~~~a~~~~~~~--------~~~~~~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~a~~~~l~~~~~~~g~ 79 (359)
++.+++++.....+ ..+|+..+..+++| ++..++|+.+. .+...||+.|+..++.+++ +|||
T Consensus 161 S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl-~PGD 239 (586)
T PLN02271 161 CRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLL-LPGD 239 (586)
T ss_pred CHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhc-CCCC
Confidence 47788887664433 23456666665554 45667888665 2667799999999999997 6999
Q ss_pred eEEecCCCcceeeccc------cccccCCccceee--ecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018240 80 EVILGDNSHIHIYENG------GISTIGGVHPRTV--KNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~------~~~~~~g~~~~~v--~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
+|+..+..|.+....+ ..+...|..+..+ +.+ +++.+|.+++++...+ .++++|++....+ |
T Consensus 240 ~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~-------~rPKLII~g~Say-p- 310 (586)
T PLN02271 240 RIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALD-------FRPKILICGGSSY-P- 310 (586)
T ss_pred EEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhh-------cCCeEEEECchhc-c-
Confidence 9998777666654422 1124455444333 343 5688999999995554 7899999944333 5
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHH--------
Q 018240 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKE-------- 222 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~-------- 222 (359)
..+| +++++++|+++|+++++|.+|..|..... ....++ .++|+++.|.||||.+|.||+++.+++
T Consensus 311 -r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g-~~~sP~-~~aDvvt~TTHKtLrGPrGG~I~~r~~~~~~~~g~ 384 (586)
T PLN02271 311 -REWD---YARFRQIADKCGAVLMCDMAHISGLVAAK-ECVNPF-DYCDIVTSTTHKSLRGPRGGIIFYRKGPKLRKQGM 384 (586)
T ss_pred -CcCC---HHHHHHHHHHcCCEEEEECcccccccccC-cCCCCC-cCCcEEEeCCcccCCCCCceEEEecccccccccCC
Confidence 4444 78999999999999999999988877522 212233 269999999999999899987877653
Q ss_pred ------------HHHHHHHHH-HhhCCCcchhHHHHHHHHHHH-----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEec
Q 018240 223 ------------FIKKARRLR-KTLGGGMRQVGVLCAAALVAL-----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDV 284 (359)
Q Consensus 223 ------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~ 284 (359)
+.+++.... ..+-++.. ...++ +...++ .++ ....++..+|++.|.+.|.+. |+.+..
T Consensus 385 ~gs~s~~~~~~d~~~kI~~aVfPglqgGph-n~~IA-alAvalkea~~~ef-k~Ya~QVv~NAkaLA~~L~~~-G~~vv~ 460 (586)
T PLN02271 385 LLSHGDDNSHYDFEEKINFAVFPSLQGGPH-NNHIA-ALAIALKQVATPEY-KAYMQQVKKNAQALASALLRR-KCRLVT 460 (586)
T ss_pred ccccccccccHHHHHHhhcccCCccccChh-HHHHH-HHHHHHHHHhChHH-HHHHHHHHHHHHHHHHHHHHC-CCeEee
Confidence 333322111 11111111 11222 222223 233 347788889999999999999 999887
Q ss_pred CCccceEEEEEeccchHHHHHHHHHHHHhcCcee----ccC-----CCcEEEEEe----CCCCCHHHHHHHHHHHHHHHH
Q 018240 285 DAVETNIVYFEITEDSKLYAACLLKKLEEHGVLV----MPE-----SSTRVRIVV----HHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~----~~~-----~~~~lRi~~----~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.......+++.+.. .+.++....+.|.+.||.+ .|+ .+.++||.. +.++.++|++++.+.|.++++
T Consensus 461 ggTdnHlvLvDl~~-~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 461 GGTDNHLLLWDLTT-LGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CCCCcceeeecCcc-cCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 77777788888865 3457788888889999988 343 345799964 446778999999999999887
No 262
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=1.4e-23 Score=186.02 Aligned_cols=320 Identities=14% Similarity=0.143 Sum_probs=206.3
Q ss_pred cccccccCCC--C-CChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCC-CC--eEEcCCchHHHHHHHHHhhhh
Q 018240 3 TRTVDLRSDT--V-TKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGK-EA--GLFVPSGTMGNLISVLVHCET 76 (359)
Q Consensus 3 ~~~id~~~~~--~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~~--~~~~~~gt~a~~~~l~~~~~~ 76 (359)
.++|||.++. . .+.+|++.+++.+....... ..+....++++++++.+.. .. .++++||++|+..++..+...
T Consensus 29 ~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar~~ 107 (375)
T PRK04260 29 KKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIWH-SPNLYLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARKA 107 (375)
T ss_pred CEEEECCCCcccccCCCCHHHHHHHHHHHHhcCc-ccCccCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHHHh
Confidence 3579998862 2 23379999999886543221 1223456777788876633 23 478899999999999987532
Q ss_pred -cCCeEEecC-CCcceeeccccccccCCc---------cceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEecc
Q 018240 77 -RGSEVILGD-NSHIHIYENGGISTIGGV---------HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENT 145 (359)
Q Consensus 77 -~g~~vl~~~-~~~~~~~~~~~~~~~~g~---------~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~ 145 (359)
.+++|+..+ ..|.+.+. . ....+. .+..++.. . ..|++.+++.++ +++++|+++++
T Consensus 108 ~~~~~vv~~~~~yHg~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~-~-~~dl~~l~~~l~--------~~~a~vi~e~v 174 (375)
T PRK04260 108 TGKQEIITFQNSFHGRTFG--S-MSATGQDKIKDGFGDGVPHFSYA-I-FNDLNSVKALVN--------KNTAAVMLELV 174 (375)
T ss_pred cCCCeEEEECCCcCcccHH--H-HhccCCcccCCCCCCCCCCeEEe-C-CCCHHHHHHhcC--------CCeEEEEECCe
Confidence 345666654 45655543 1 211111 11111110 0 138899998886 57889999877
Q ss_pred ccCCCceec-ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH--hhhcCccEEEEeccccCCCce-eeEEecCH
Q 018240 146 HANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR--RLVQAADSASVCLSKGLGAPV-GSVIVGSK 221 (359)
Q Consensus 146 ~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~~d~~~~s~~K~~g~~~-gg~~~~~~ 221 (359)
.+ ++|... +.++++++.++|+++|+++|+||+|. + +...+.... .....+|++ |+||.++.+. .|++++++
T Consensus 175 ~~-~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~-g-~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~ 249 (375)
T PRK04260 175 QG-ESGVLPADKDFVKALADYCQETGILLIVDEVQT-G-MGRTGKLYAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKS 249 (375)
T ss_pred EC-CCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCcccchhhhHhhCCCCCEE--EecccccCCcceEEEEEcH
Confidence 76 778764 45889999999999999999999974 2 333332211 222245644 7889997432 27778888
Q ss_pred HHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH-HHHhhhHHHHHHH----HHHHHhcCCCceEecCCccceEEEEEe
Q 018240 222 EFIKKARRLRKTLGGGMRQVGVLCAAALVALQENV-LVMLDGDHKKAKL----LAEGLNQLKGLRVDVDAVETNIVYFEI 296 (359)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~----l~~~l~~~~g~~~~~~~~~~~~~~~~~ 296 (359)
++.+.+... ....++..++..++++...++... ++.+++..++.++ +.+.+.+.+.+... +..+.++|+.+
T Consensus 250 ~~~~~~~~~--~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~g~~~~~~~ 325 (375)
T PRK04260 250 SLGGAFGYG--SHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTV--RGLGYMIGIET 325 (375)
T ss_pred HHHhhcCCC--CCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE--eccceEEEEEe
Confidence 887765421 233344445666666666664332 1233444444444 44444444322222 23788899988
Q ss_pred ccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 297 TEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 297 ~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
.. +..++.++|.++||.+.+.+...+|++++..++++++++++++|+++
T Consensus 326 ~~----~~~~~~~~l~~~Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 326 TA----DLSQLVEAARDKGLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred cC----cHHHHHHHHHhCCCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 54 56789999999999998887889999998899999999999999875
No 263
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.94 E-value=2.2e-23 Score=185.54 Aligned_cols=329 Identities=18% Similarity=0.183 Sum_probs=218.9
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC---ccCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHHh
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD---VLMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~~ 73 (359)
.+++||.++ +....+|.+.+++.+...... .+...+...++.+.+++.++. +.+++++||++|+..+++.+
T Consensus 75 ~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklA 154 (442)
T TIGR03372 75 NEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLA 154 (442)
T ss_pred CEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHH
Confidence 367899887 455666999988887554321 233467778888889888754 34688899999999999988
Q ss_pred hhh---cC-CeEEecCC-CcceeeccccccccCCc------------cceeeecCCCCCCCHHHHHHHhcCCCCCccCCc
Q 018240 74 CET---RG-SEVILGDN-SHIHIYENGGISTIGGV------------HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPT 136 (359)
Q Consensus 74 ~~~---~g-~~vl~~~~-~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 136 (359)
... +| .+|+..+. .|..+.. + ....+. .+..++.+ |.+.+++.+++.. .+..+
T Consensus 155 r~~t~~~gr~~ii~~~~~yHG~t~~--~-ls~t~~~~~~~~~~p~~~~~~~~p~~-----d~~~~~~~l~~~~--~~~~~ 224 (442)
T TIGR03372 155 KAYQSPRGKFTFIAASGAFHGKSLG--A-LSATAKPAFRKPFMPLLPGFHHVAFG-----DIEAMLKALNECK--KTGDD 224 (442)
T ss_pred HHHHhhcCCcEEEEECCCccCCCHH--H-hhccCCcccCCCCCCCCCCCEEeCCC-----CHHHHHHHHHHHh--cCCCc
Confidence 753 13 45665555 4444322 1 211111 12223332 6777777775321 11157
Q ss_pred eeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEeccccCCC--
Q 018240 137 TRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSKGLGA-- 211 (359)
Q Consensus 137 ~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~g~-- 211 (359)
+.+|++++..++ .|.. .|.+++++++++|++||+++|+||+|.. ++..|.. ...+.-.+|+++ ++|.+|.
T Consensus 225 vAavIvEpv~g~-gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG--~GRtG~~~a~e~~gv~PDivt--~gK~lg~G~ 299 (442)
T TIGR03372 225 VAAIILEPIQGE-GGVILPPEGYLPAVRALCDEFGALLILDEVQTG--MGRTGKMFACEHEGVQPDILC--LAKALGGGV 299 (442)
T ss_pred EEEEEEeCccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEeecccC--CCccccchhhhhcCCCCCeee--ehhhhcCCc
Confidence 899999999884 5664 5679999999999999999999999842 2222332 112223567654 6798864
Q ss_pred -ceeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC----CCceEecC
Q 018240 212 -PVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL----KGLRVDVD 285 (359)
Q Consensus 212 -~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~----~g~~~~~~ 285 (359)
|.|+ +++++++.+.+......++.++..+++.++++...++...+ +..++..++.++|++.|+++ |..-...
T Consensus 300 ~Piga-vv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~v- 377 (442)
T TIGR03372 300 MPIGA-TIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEA- 377 (442)
T ss_pred ccceE-EEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-
Confidence 4555 55677887776321113455666678888888888876543 24556667777777777664 2111111
Q ss_pred CccceEEEEEeccchHHHHHHHHHHHHhcCceeccC--CCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 286 AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE--SSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~--~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
...+.++.+.+..+ .....+.+.|.++||.+.+. +...+|+.++..++++++++++++|++++
T Consensus 378 RG~Gl~~giel~~~--~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 378 RGKGLLMAIEFRDN--EIGYAFAKELFQQNILVAGTLNNAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred ecceEEEEEEeCCh--HHHHHHHHHHHHCCcEEeecCCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 34677778887652 24578899999999998654 34789999999999999999999998764
No 264
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.94 E-value=8.2e-25 Score=192.66 Aligned_cols=289 Identities=19% Similarity=0.238 Sum_probs=193.1
Q ss_pred ccCCCCCChHHHHHHHHHcCCCC---C-Cc--cCC----ChHHHHHHHHHHHHhCCCC--eEEcCCchHHHHHHHHHhhh
Q 018240 8 LRSDTVTKPTEAMRAAMASAEVD---D-DV--LMH----DPTAFRLETEMAKVMGKEA--GLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 8 ~~~~~~~~~~~~~~~a~~~~~~~---~-~~--~~~----~~~~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l~~~~~ 75 (359)
|++...+.+++.+++++.+.... . .. +.. .....++++.+++++|.+. .++++|+++++..++..+..
T Consensus 2 ld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~ 81 (353)
T TIGR03235 2 LDHNATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLAR 81 (353)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHH
Confidence 55556666678888888664321 1 11 111 1335789999999999864 35666667888888877653
Q ss_pred ---hcC-CeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018240 76 ---TRG-SEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 76 ---~~g-~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
++| +.|+++...|.+........+..|++++.++.+.++.+|++++++.++ +++++|+++++. ||||
T Consensus 82 ~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~--------~~~~lv~~~~~~-n~tG 152 (353)
T TIGR03235 82 AGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIR--------PDTLLVSIMHVN-NETG 152 (353)
T ss_pred hcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCC--------CCCEEEEEEccc-CCce
Confidence 245 678898888877654112234468899999887788899999999997 678899986554 5999
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHH--H
Q 018240 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKA--R 228 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~--~ 228 (359)
.+.| +++|.++|+++|+++|+|++|++|.... .... .++|++++|.+|++| |.| |+++.+++..... +
T Consensus 153 ~~~~---~~~I~~l~~~~~~~~ivD~a~~~g~~~~---~~~~--~~~D~~~~s~~K~~g-p~g~g~l~~~~~~~~~~~~~ 223 (353)
T TIGR03235 153 SIQP---IREIAEVLEAHEAFFHVDAAQVVGKITV---DLSA--DRIDLISCSGHKIYG-PKGIGALVIRKRGKPKAPLK 223 (353)
T ss_pred eccC---HHHHHHHHHHcCCEEEEEchhhcCCccc---cccc--cCCCEEEeehhhcCC-CCceEEEEEccCcccccccC
Confidence 9988 7999999999999999999998766532 2222 379999999999876 655 8887776643221 1
Q ss_pred HHHH-------hhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCc--cceEEEEEe
Q 018240 229 RLRK-------TLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV--ETNIVYFEI 296 (359)
Q Consensus 229 ~~~~-------~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~--~~~~~~~~~ 296 (359)
.... ...++.....+ .+...++ ....+.+.+++.++.+++++.|++ +|+++..++. ...++.+.+
T Consensus 224 ~~~~~~~~~~~~~~gt~~~~~~--~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~ 300 (353)
T TIGR03235 224 PIMFGGGQERGLRPGTLPVHLI--VGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSI 300 (353)
T ss_pred ceeeCCCCcCccccCCCChHHH--HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEe
Confidence 1000 01111111111 1122222 334445677888899999999988 5998754332 223455555
Q ss_pred ccchHHHHHHHHHHHHhcCceeccC
Q 018240 297 TEDSKLYAACLLKKLEEHGVLVMPE 321 (359)
Q Consensus 297 ~~~~~~~~~~~~~~l~~~gi~~~~~ 321 (359)
+. .+.+++.+.|.+ ||.+.++
T Consensus 301 ~~---~~~~~v~~~L~~-~i~v~~g 321 (353)
T TIGR03235 301 DG---VNSEALIVNLRA-DAAVSTG 321 (353)
T ss_pred CC---cCHHHHHHHHhC-CeEEEch
Confidence 43 477889999965 8888665
No 265
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.93 E-value=7.6e-24 Score=185.05 Aligned_cols=280 Identities=18% Similarity=0.145 Sum_probs=201.4
Q ss_pred CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCC
Q 018240 36 HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDG 114 (359)
Q Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 114 (359)
..|....+|+.++++.|.+.++.++||+.|+..++.+++ ++||+|+++...|...+... ......|++++.++.++
T Consensus 62 ~~P~~~~lE~~la~leg~~~av~~sSG~aAi~~al~all-~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~-- 138 (384)
T PRK06434 62 GNPTVQAFEEKYAVLENAEHALSFSSGMGAITSAILSLI-KKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDR-- 138 (384)
T ss_pred CChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHh-CCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCC--
Confidence 378899999999999999999999999999999999887 69999999887665555311 22456788888887542
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh
Q 018240 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
.+.+. ++. .++++|+++++.| ||+.+.+ +++|+++|++++ +++|.+++ .+..+. ++
T Consensus 139 ---~~~~~--l~~-------~~tklv~~e~~sn-pt~~v~D---i~~I~~la~~~~--lvVD~t~~---s~~~~~---pl 194 (384)
T PRK06434 139 ---LNSLD--FDP-------SNYDLIYAESITN-PTLKVPD---IKNVSSFCHEND--VIVDATFA---SPYNQN---PL 194 (384)
T ss_pred ---hhhee--ecC-------CCeeEEEEEcCCC-CCceeec---HHHHHHHHHHcC--eEEECCCC---CcccCC---ch
Confidence 22222 331 4789999977665 9998766 899999999998 56799842 122222 33
Q ss_pred hcCccEEEEeccccCCCce---eeEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHH
Q 018240 195 VQAADSASVCLSKGLGAPV---GSVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLL 270 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~~---gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 270 (359)
..++|++++|.+|+++++. ||+++. ++++.++++..+...|... ++..++.+..+++.... ++++..+++..+
T Consensus 195 ~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~--~~~~A~l~~~gL~tL~~-R~~r~~~~a~~~ 271 (384)
T PRK06434 195 DLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNP--DPIQAYLALRGLKTLGL-RMEKHNKNGMEL 271 (384)
T ss_pred hcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCC--CHHHHHHHHhCCCcHHH-HHHHHHHHHHHH
Confidence 3589999999999997643 677765 6677777776655566554 56667777777777655 889999999999
Q ss_pred HHHHhcCCCce-EecCC---------ccceEEEEEeccchHHHHHHHHHHHHhcCceec----------cC---------
Q 018240 271 AEGLNQLKGLR-VDVDA---------VETNIVYFEITEDSKLYAACLLKKLEEHGVLVM----------PE--------- 321 (359)
Q Consensus 271 ~~~l~~~~g~~-~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----------~~--------- 321 (359)
.+.|++.|.++ +..|. ..+.++.|.+.. .....+|.+.|+--.+.+. |.
T Consensus 272 a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~--~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~ 349 (384)
T PRK06434 272 ARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS--MEDVHKFIRNLEIPMVAASLGGVESLITLPVETSHSSLSP 349 (384)
T ss_pred HHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC--HHHHHHHHHhCCcceEccCCCCCCeeeECCCccccccCCH
Confidence 99999988764 44432 356778888864 2356677777743222211 11
Q ss_pred --------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 322 --------SSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 322 --------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.++.||+++. + |+.+.+++-|.+++.
T Consensus 350 e~~~~~gi~~~liRlsvG--l--Ed~~dLi~dl~~Al~ 383 (384)
T PRK06434 350 EERERLGISDNLVRFSIG--I--EDIDDLIKDIENALS 383 (384)
T ss_pred HHHHhcCCCcCeEEEEeC--c--CCHHHHHHHHHHHhc
Confidence 2346999995 3 578888888887775
No 266
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.93 E-value=1.7e-23 Score=188.29 Aligned_cols=340 Identities=16% Similarity=0.141 Sum_probs=217.0
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCc----cCCChHHHHHHHHHHHHhC--CCCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDV----LMHDPTAFRLETEMAKVMG--KEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~l~~~la~~~~--~~~~~~~~~gt~a~~~~l~~ 72 (359)
.++|||.++ +....+|++.+++.+....... ....+...++.+.++++++ .+..++++||++|+..+++.
T Consensus 43 ~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~Alkl 122 (433)
T PRK08117 43 KEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKL 122 (433)
T ss_pred CEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHH
Confidence 357898886 2334458888888875533111 1245777899999999983 33457779999999999998
Q ss_pred hhhhcC-CeEE-ecCCCcceeeccccccccC-------Cc-----cceeeecCCCCC------------CCHHHHHHHhc
Q 018240 73 HCETRG-SEVI-LGDNSHIHIYENGGISTIG-------GV-----HPRTVKNNQDGT------------MDIDLIEAAIR 126 (359)
Q Consensus 73 ~~~~~g-~~vl-~~~~~~~~~~~~~~~~~~~-------g~-----~~~~v~~~~~~~------------~~~~~l~~~l~ 126 (359)
+..-.| .+|+ +...+|..+.. ++.... +. .+..++.+..+. -+++++++.++
T Consensus 123 Ar~~tgr~~ii~~~~~yHG~t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 200 (433)
T PRK08117 123 AKHVTKRPYIISFTGCFHGRTLG--ALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFK 200 (433)
T ss_pred HHHhcCCCeEEEECCCcCCcCHH--HHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHH
Confidence 764233 3455 44555655432 110000 00 112222221110 14566777765
Q ss_pred CCCCCccCCceeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH--hhhcCccEEEE
Q 018240 127 DPKGEIVYPTTRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR--RLVQAADSASV 203 (359)
Q Consensus 127 ~~~~~~~~~~~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~~d~~~~ 203 (359)
+... ..++.+|++++..++ .|.. .+.+++++++++|++||+++|+||+|.. +...|.... .+...+|+ .
T Consensus 201 ~~~~---~~~~aavi~Epi~~~-~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG--~gr~G~~~~~~~~gv~pDi--~ 272 (433)
T PRK08117 201 HQVT---PEEVAAVIIEPVLGE-GGYIVPPKSFLKKLREICDRHGILLIFDEVQTG--FGRTGEWFAAQTFGVVPDI--M 272 (433)
T ss_pred hccC---CCcEEEEEECCeeCC-CCCccCCHHHHHHHHHHHHHcCCEEEEecchhc--cCccccchhHhhcCCCCCE--e
Confidence 3111 146899999999885 4554 5679999999999999999999999863 333343221 22123454 5
Q ss_pred eccccCCCce-eeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhcCC---
Q 018240 204 CLSKGLGAPV-GSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQLK--- 278 (359)
Q Consensus 204 s~~K~~g~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~~~--- 278 (359)
+++|.++.+. .|++++++++.+.+.. ...+.++..+++.++++..+++... +...++..++.+++++.|+++.
T Consensus 273 t~sK~lg~G~pigav~~~~~i~~~~~~--~~~~~T~~~np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~ 350 (433)
T PRK08117 273 TIAKGIASGLPLSAVVASKELMEQWPL--GSHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKEKH 350 (433)
T ss_pred ehhhhccCCCcceeEEEcHHHHhhccC--CCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8889997432 2667788888877632 2345555567777888888886542 2355666677777777776641
Q ss_pred CceEecCCccceEEEEEeccc----hHHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 279 GLRVDVDAVETNIVYFEITED----SKLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 279 g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.+... .+..+.++.+.+..+ .......+.+.|.++||.+.+.+ ...+|++++..++++++++++++|.+++++
T Consensus 351 ~~~~~-vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~ 429 (433)
T PRK08117 351 PVIGD-VRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEEIDEGLDILDEALTE 429 (433)
T ss_pred Cceee-eecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 11111 133455566666421 12345678888899999886543 478999998899999999999999999987
Q ss_pred HHh
Q 018240 353 VCE 355 (359)
Q Consensus 353 ~~~ 355 (359)
+.+
T Consensus 430 ~~~ 432 (433)
T PRK08117 430 YEA 432 (433)
T ss_pred Hhc
Confidence 743
No 267
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.93 E-value=8e-23 Score=183.05 Aligned_cols=339 Identities=17% Similarity=0.121 Sum_probs=218.2
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC----ccCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD----VLMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~----~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~ 72 (359)
.+++||.++ +....+|.+.+++.+...... .+..++...++.+.+++.++. +...+++||++|+..+++.
T Consensus 41 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~Alkl 120 (443)
T PRK08360 41 NEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKF 120 (443)
T ss_pred CEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHH
Confidence 357899887 445556999988887654321 223356677888888888765 3568899999999999998
Q ss_pred hhhhcCC-eEEec-CCCcceeeccccccccCC------------ccceeeecCCCCC------------CCHHHHHHHhc
Q 018240 73 HCETRGS-EVILG-DNSHIHIYENGGISTIGG------------VHPRTVKNNQDGT------------MDIDLIEAAIR 126 (359)
Q Consensus 73 ~~~~~g~-~vl~~-~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~------------~~~~~l~~~l~ 126 (359)
+..-.|. +|+.- ...|..... + ....+ ..+..++.+.... -+++.+++.++
T Consensus 121 Ar~~tgr~~ii~~~~~yHG~t~~--a-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 197 (443)
T PRK08360 121 ARAYTKRRKILSYLRSYYGSTYG--A-MSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFE 197 (443)
T ss_pred HHHhcCCCeEEEEeCCcCCcCHH--H-HHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHH
Confidence 8754443 45543 445544322 1 11111 0122222221110 12345666665
Q ss_pred CCCCCccCCceeEEEEeccccCCCceecC-hhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEE
Q 018240 127 DPKGEIVYPTTRLICLENTHANCGGRCLS-VEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASV 203 (359)
Q Consensus 127 ~~~~~~~~~~~~~v~i~~~~~~ptG~~~~-~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~ 203 (359)
+. .+.+++++|++++. .+|+|..++ .++++++.++|++||+++|+||+|... ...+.. ...+....|++
T Consensus 198 ~~---~~~~~iAAvi~eP~-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~--gr~G~~~a~~~~~~~pDii-- 269 (443)
T PRK08360 198 GE---VYAEGVAALFAEPI-QGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGL--GRTGKWFAIEHFGVEPDII-- 269 (443)
T ss_pred hc---cCCCCeEEEEECCc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCC--CcCccchhhhhcCCCCCEE--
Confidence 31 11157999999774 458998776 568999999999999999999997532 223321 11222245655
Q ss_pred eccccCCCce-eeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC-C--
Q 018240 204 CLSKGLGAPV-GSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL-K-- 278 (359)
Q Consensus 204 s~~K~~g~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~-~-- 278 (359)
+++|.++.+. .|++++++++.+.+... ..+.++..++..++++..+++...+ +..++..++.++|++.|+++ .
T Consensus 270 tlsK~l~~G~pigav~~~~~i~~~~~~~--~~~~T~~~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~ 347 (443)
T PRK08360 270 TLGKPLGGGLPISATIGRAEIMDSLPPL--AHAFTLSGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKH 347 (443)
T ss_pred EecccccCCceeEEEEEcHHHHhhhcCC--CCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5689997432 27788888888876532 2344555567777777777765433 35566667777777777653 0
Q ss_pred CceEecCCccceEEEEEeccc------hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 279 GLRVDVDAVETNIVYFEITED------SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 279 g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
++.... ...+.++.+.+..+ ....+..+...|.++|+.+.+.+...+|++++..++++++++++++++++++.
T Consensus 348 ~~v~~v-rg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lr~~P~l~~t~~~id~~~~~l~~~l~~ 426 (443)
T PRK08360 348 ELIGDV-RGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFSGNVLRIQPPLTIEKEVLDEGLDILEEAIED 426 (443)
T ss_pred CCeeee-eccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 121111 23555666655321 11245678888999999987666688999999999999999999999999987
Q ss_pred HHh
Q 018240 353 VCE 355 (359)
Q Consensus 353 ~~~ 355 (359)
+.+
T Consensus 427 ~~~ 429 (443)
T PRK08360 427 VEE 429 (443)
T ss_pred HHh
Confidence 753
No 268
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.93 E-value=1.3e-23 Score=184.42 Aligned_cols=276 Identities=18% Similarity=0.131 Sum_probs=191.1
Q ss_pred CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCC
Q 018240 36 HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDG 114 (359)
Q Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 114 (359)
..|...++++.++++. .+.+++++||++|+..++.+++ ++||+|+++.+.|+...... ......|++++.++.+++
T Consensus 49 ~~p~~~~Le~~lA~l~-~~~~v~~~sG~~Ai~~~l~all-~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~- 125 (366)
T PRK07582 49 SNPTWRALEAALGELE-GAEALVFPSGMAAITAVLRALL-RPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGM- 125 (366)
T ss_pred CCccHHHHHHHHHHHc-CCCEEEECCHHHHHHHHHHHhc-CCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCCh-
Confidence 4678899999999999 5678999999999998888887 59999999999986654311 013456888888865422
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh
Q 018240 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
.. .+. +++++|+++++ +||||.+.+ +++|.++|+++|+++|+|++|... .+....+
T Consensus 126 ----~~---~~~--------~~t~lV~le~p-~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~----~~~~p~~- 181 (366)
T PRK07582 126 ----AE---AAL--------AGADLVLAETP-SNPGLDVCD---LAALAAAAHAAGALLVVDNTTATP----LGQRPLE- 181 (366)
T ss_pred ----HH---Hhc--------cCceEEEEECC-CCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCc----cccCchh-
Confidence 11 223 57889999655 559997765 899999999999999999986321 1212222
Q ss_pred hcCccEEEEeccccCCCce---eeEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHH
Q 018240 195 VQAADSASVCLSKGLGAPV---GSVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLL 270 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~~---gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 270 (359)
.++|+++.|+||+++++. +|+++. ++++.+.++..+...+... ++..++.+..+++... .++++..+++..+
T Consensus 182 -~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~--~~~~a~l~~r~l~tl~-~R~~~~~~na~~l 257 (366)
T PRK07582 182 -LGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIP--GPFEAWLAHRSLGTLG-LRFARQCANALAV 257 (366)
T ss_pred -cCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCC--CHHHHHHHHhccccHH-HHHHHHHHHHHHH
Confidence 368999999999997654 377776 6888888887777666555 4566666666676543 3778889999999
Q ss_pred HHHHhcCCCce-EecC-----C----------ccceEEEEEeccchHHHHHHHHHHHHhcCceec---c-----------
Q 018240 271 AEGLNQLKGLR-VDVD-----A----------VETNIVYFEITEDSKLYAACLLKKLEEHGVLVM---P----------- 320 (359)
Q Consensus 271 ~~~l~~~~g~~-~~~~-----~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~---~----------- 320 (359)
.+.|++.|.+. +..| | ..+.++.|.+.. .++..+.+...++... -
T Consensus 258 a~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~-----~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~ 332 (366)
T PRK07582 258 AELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELAD-----AAAAERFVAASRLVVAATSFGGVHTSADRRA 332 (366)
T ss_pred HHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCC-----HHHHHHHHHhCCcceecccCCCccchhhhHH
Confidence 99999988774 3322 1 246677888853 2233344444444321 0
Q ss_pred -----CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 321 -----ESSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 321 -----~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
..++.||++++.. +.+++++.|+++++
T Consensus 333 ~~~~~~~~~liR~svGlE----~~~dli~dl~~al~ 364 (366)
T PRK07582 333 RWGDAVPEGFVRLSCGIE----DTDDLVADLERALD 364 (366)
T ss_pred HcCCCCCCCeEEEEeccC----CHHHHHHHHHHHHh
Confidence 1235799999744 44555555555544
No 269
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.93 E-value=2.7e-23 Score=185.61 Aligned_cols=334 Identities=15% Similarity=0.152 Sum_probs=214.2
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCc--c--CCChHHHHHHHHHHHHhCC---CCeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDV--L--MHDPTAFRLETEMAKVMGK---EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~--~--~~~~~~~~l~~~la~~~~~---~~~~~~~~gt~a~~~~l~ 71 (359)
.++|||.++ +....+|.+.+++.+....... + ..++...++.+.+++..+. +...+++||++|+..+++
T Consensus 40 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~Alk 119 (421)
T PRK09792 40 NEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVK 119 (421)
T ss_pred CEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHH
Confidence 357898776 3344458888888775543221 1 2356667888888887753 356889999999999999
Q ss_pred HhhhhcCC-eEEecCC-CcceeeccccccccCCc-------------cceeeecCCCC-CC----CHHHHHHHhcCCCCC
Q 018240 72 VHCETRGS-EVILGDN-SHIHIYENGGISTIGGV-------------HPRTVKNNQDG-TM----DIDLIEAAIRDPKGE 131 (359)
Q Consensus 72 ~~~~~~g~-~vl~~~~-~~~~~~~~~~~~~~~g~-------------~~~~v~~~~~~-~~----~~~~l~~~l~~~~~~ 131 (359)
.+..-.|. +|+.... +|+.+.. . ....+. .+..++.+.+. .+ +++.+++.+++..
T Consensus 120 lAr~~tgr~~ii~~~~~yHG~t~~--~-~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~-- 194 (421)
T PRK09792 120 IARAHTGRPGVIAFSGGFHGRTYM--T-MALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDI-- 194 (421)
T ss_pred HHHHhcCCCeEEEECCCcCCccHH--H-HhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcc--
Confidence 98754443 4554444 5544322 1 111110 12222222111 11 3467777776310
Q ss_pred ccCCceeEEEEeccccCCCceec-ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEecccc
Q 018240 132 IVYPTTRLICLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSKG 208 (359)
Q Consensus 132 ~~~~~~~~v~i~~~~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K~ 208 (359)
...++++|++++.. +++|... |.+++++|+++|++||+++|+||++... ...+.. ...+...+|+ .+++|.
T Consensus 195 -~~~~iaavi~EPvq-~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~--gr~G~~~a~~~~~~~pDi--~t~gK~ 268 (421)
T PRK09792 195 -EAKQVAAIIFEPVQ-GEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGF--ARTGKLFAMDHYADKPDL--MTMAKS 268 (421)
T ss_pred -CCCceEEEEEcccc-CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC--CCCCchhHHHhcCCCCcE--EEeehh
Confidence 11578999998874 5889764 8899999999999999999999997532 223332 2222235664 577899
Q ss_pred CCCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhc----CCCceE
Q 018240 209 LGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQ----LKGLRV 282 (359)
Q Consensus 209 ~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~----~~g~~~ 282 (359)
+++... |++++++++.+.+... ..+.++..+++.++++...++...+ +..++..++.+++.+.|++ .|.+.
T Consensus 269 l~~G~pigav~~~~~i~~~~~~~--~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~p~v~- 345 (421)
T PRK09792 269 LAGGMPLSGVVGNANIMDAPAPG--GLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIA- 345 (421)
T ss_pred hcCCCceEEEEEcHHHHhccCCC--CcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhCCCcc-
Confidence 864332 6688888888776422 2445555667777777666654322 2444555556666665554 33322
Q ss_pred ecCCccceEEEEEeccch-----HHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 283 DVDAVETNIVYFEITEDS-----KLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.....+.++++.+..+. ......+.+.+.++||.+.+.+ .+.+|+.++..++++++++++++|.++++
T Consensus 346 -~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 346 -AVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred -eecccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecCCCCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 22345888898886421 1346788889999999996533 47899999988999999999999998875
No 270
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.93 E-value=3e-23 Score=176.79 Aligned_cols=336 Identities=18% Similarity=0.171 Sum_probs=230.0
Q ss_pred ccccccCCCCC----ChHHHHHHHHHcCCCCCCccCC-ChHHHHHHHHHHHHhCC-CCeEEcCCchHHHHHHHHHhhhh-
Q 018240 4 RTVDLRSDTVT----KPTEAMRAAMASAEVDDDVLMH-DPTAFRLETEMAKVMGK-EAGLFVPSGTMGNLISVLVHCET- 76 (359)
Q Consensus 4 ~~id~~~~~~~----~~~~~~~~a~~~~~~~~~~~~~-~~~~~~l~~~la~~~~~-~~~~~~~~gt~a~~~~l~~~~~~- 76 (359)
++|||-.+.-. ..+|.|.+++.+.......|+. ++...++-+.+.+.++. +..-+++|||+|...+++.++.-
T Consensus 54 ~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~Pte~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~T 133 (432)
T COG0001 54 EYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGAPTELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYT 133 (432)
T ss_pred EeeehhccCcccccCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhh
Confidence 56777765332 3348999999987776666764 56667888889999887 77889999999999999988653
Q ss_pred cCCeEEecCCCcceeecccccccc-CC-----------------ccceeeecCCCCCCCHHHHHHHhcCCCCCccCCcee
Q 018240 77 RGSEVILGDNSHIHIYENGGISTI-GG-----------------VHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTR 138 (359)
Q Consensus 77 ~g~~vl~~~~~~~~~~~~~~~~~~-~g-----------------~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 138 (359)
..++|+..+.+|....... ..+. .| ...+.++.+ |++.+++.+++.. .+++
T Consensus 134 gR~kIikF~G~YHG~~D~~-lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-----D~~al~~~~~~~g-----~~IA 202 (432)
T COG0001 134 GRDKIIKFEGCYHGHSDSL-LVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-----DLEALEEAFEEYG-----DDIA 202 (432)
T ss_pred CCCeEEEEcCCCCCCccHH-HhhcCcCcccCCCCCCCCCChhhhccEEEecCC-----CHHHHHHHHHHcC-----CcEE
Confidence 3457777776665544311 1111 11 122333444 9999999999643 5899
Q ss_pred EEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEE
Q 018240 139 LICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVI 217 (359)
Q Consensus 139 ~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~ 217 (359)
+|++++...|.+=+....+++++|+++|+++|+++|.||+... .....+-...-+.-.+|+. ++.|..|++.. |++
T Consensus 203 aVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTG-FR~~~gGaq~~~gi~PDlt--tlGKiIGGGlP~ga~ 279 (432)
T COG0001 203 AVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITG-FRVALGGAQGYYGVEPDLT--TLGKIIGGGLPIGAF 279 (432)
T ss_pred EEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhh-cccCCcccccccCcCcchh--hhhhhhcCCcceeee
Confidence 9999999998643355559999999999999999999999643 2222222223332345644 56698876544 667
Q ss_pred ecCHHHHHHHHHHH-HhhCCCcchhHHHHHHHHHHHHHhHH--HHhhhHHHHHHHHHHHHhcC---CCceEecCCccceE
Q 018240 218 VGSKEFIKKARRLR-KTLGGGMRQVGVLCAAALVALQENVL--VMLDGDHKKAKLLAEGLNQL---KGLRVDVDAVETNI 291 (359)
Q Consensus 218 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~~~~~ 291 (359)
.+++++++.+.... .+..++++.+++.++++..+++...+ ...++..+..++|++.|++. .++.+......+.+
T Consensus 280 gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~ 359 (432)
T COG0001 280 GGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMF 359 (432)
T ss_pred ccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceE
Confidence 88999999865444 35567788889999999998876654 14677777788888777763 26655433333333
Q ss_pred -EEEEeccc-h--------HHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 292 -VYFEITED-S--------KLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 292 -~~~~~~~~-~--------~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
++|.-... . ......+..+|.++||++.|..-...=+|. .++++++++.+++++++++++..
T Consensus 360 ~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~ea~flS~--ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 360 GIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQFEAGFLST--AHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred EEEecCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccCCccccceeeec--ccCHHHHHHHHHHHHHHHHHhhc
Confidence 22322110 0 012345666888999999776534444555 79999999999999999888753
No 271
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.93 E-value=9.1e-23 Score=167.78 Aligned_cols=303 Identities=21% Similarity=0.261 Sum_probs=213.1
Q ss_pred HHHHHHHHcCCCCCCccCC--ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc
Q 018240 18 EAMRAAMASAEVDDDVLMH--DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG 95 (359)
Q Consensus 18 ~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~ 95 (359)
.+-...+.....-...|.. .|....+|++++.+-|--..+.+.||..|...++..+. ++||.|+.++.-|...+..-
T Consensus 40 ~~haa~lF~l~~~G~iYsRi~NPT~~vlE~RiAaLEGG~aa~a~aSG~AA~~~ai~~la-~aGD~iVss~~LYGGT~~lf 118 (426)
T COG2873 40 TDHAAALFGLKEPGNIYTRIMNPTTDVLEERIAALEGGVAALAVASGQAAITYAILNLA-GAGDNIVSSSKLYGGTYNLF 118 (426)
T ss_pred HHHHHHHhCCCcCCceeeeccCchHHHHHHHHHHhhcchhhhhhccchHHHHHHHHHhc-cCCCeeEeeccccCchHHHH
Confidence 3333334433222445553 68889999999999988888999999999999999999 59999999988887765411
Q ss_pred -cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEE
Q 018240 96 -GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLH 174 (359)
Q Consensus 96 -~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li 174 (359)
-..+..|+++.+++.+ |++.+++.++ ++||+|++++..| |.+.+.+ +++|.++|+++|+++|
T Consensus 119 ~~tl~~~Gi~v~fvd~~-----d~~~~~~aI~--------~nTkavf~EtigN-P~~~v~D---ie~ia~iAh~~gvpli 181 (426)
T COG2873 119 SHTLKRLGIEVRFVDPD-----DPENFEAAID--------ENTKAVFAETIGN-PGLDVLD---IEAIAEIAHRHGVPLI 181 (426)
T ss_pred HHHHHhcCcEEEEeCCC-----CHHHHHHHhC--------cccceEEEEeccC-CCccccC---HHHHHHHHHHcCCcEE
Confidence 1246789999999766 8999999999 8999999988776 9988877 8999999999999999
Q ss_pred EecccccchhhhcCchhHhhhcCccEEEEeccccCCC---ceeeEEecC--HHH---------------------HH---
Q 018240 175 IDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGA---PVGSVIVGS--KEF---------------------IK--- 225 (359)
Q Consensus 175 ~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~---~~gg~~~~~--~~~---------------------~~--- 225 (359)
||.. +.. +.-..++..++|+++.|.+||.|+ ..||+++-. -++ .+
T Consensus 182 VDNT--~at----pyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g 255 (426)
T COG2873 182 VDNT--FAT----PYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFG 255 (426)
T ss_pred EecC--CCc----ceecchhhcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcc
Confidence 9997 221 223455656999999999999975 245666521 111 11
Q ss_pred ------HHH-HHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEe-c-------------
Q 018240 226 ------KAR-RLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVD-V------------- 284 (359)
Q Consensus 226 ------~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~------------- 284 (359)
+.+ ....-.|.+. ++..++..+.+++..-- +++|..+++..+.+.|++.|.+... .
T Consensus 256 ~~af~~~~r~~~lRDlGa~l--sPfnAfl~lqGlETL~L-RmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~ 332 (426)
T COG2873 256 NAAFIIKARVQLLRDLGATL--SPFNAFLLLQGLETLSL-RMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAK 332 (426)
T ss_pred cHHHHHHHHHHHHHhccccc--CcHHHHHHHhchhhhHH-HHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHH
Confidence 111 1111234444 55556666666665443 8899999999999999998765431 1
Q ss_pred ---CCccceEEEEEeccchHHHHHHHHHHHHh----------cCceeccC-----------------CCcEEEEEeCCCC
Q 018240 285 ---DAVETNIVYFEITEDSKLYAACLLKKLEE----------HGVLVMPE-----------------SSTRVRIVVHHQI 334 (359)
Q Consensus 285 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------~gi~~~~~-----------------~~~~lRi~~~~~~ 334 (359)
+...+.++.|.+.+. .....+|.+.|+- +-+.+-|. .++.||+|+.
T Consensus 333 kyl~~g~g~vltF~~kgg-~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVG--- 408 (426)
T COG2873 333 KYLPKGAGAVLTFGVKGG-YEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVG--- 408 (426)
T ss_pred hhccCCCceEEEEEecCh-HHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEec---
Confidence 234566778888763 2344555555531 22233232 4567999984
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 018240 335 SANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 335 ~~~~i~~~~~~l~~~~~~ 352 (359)
-|+++.++.-|++++++
T Consensus 409 -IEd~~DiiaDl~qAl~~ 425 (426)
T COG2873 409 -IEDIDDIIADLEQALEA 425 (426)
T ss_pred -cCCHHHHHHHHHHHHhc
Confidence 37888888888887764
No 272
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.93 E-value=1e-22 Score=184.26 Aligned_cols=339 Identities=17% Similarity=0.122 Sum_probs=217.5
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCc-----cCCChHHHHHHHHHHHHhC-C--CCeEEcCCchHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDV-----LMHDPTAFRLETEMAKVMG-K--EAGLFVPSGTMGNLISV 70 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~-----~~~~~~~~~l~~~la~~~~-~--~~~~~~~~gt~a~~~~l 70 (359)
.++|||.++ +....+|++.+++.+....... ....+...++.+.+.+.+. . ..+.+++||++|+..++
T Consensus 89 ~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~Al 168 (504)
T PLN02760 89 KKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQV 168 (504)
T ss_pred CEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHH
Confidence 367999884 4445559999999886543221 1245667888888888863 2 34588999999999999
Q ss_pred HHhhh------hcC-CeEE-ecCCCcceeeccccccccCCcc------------ceeeecCCCCC-------------CC
Q 018240 71 LVHCE------TRG-SEVI-LGDNSHIHIYENGGISTIGGVH------------PRTVKNNQDGT-------------MD 117 (359)
Q Consensus 71 ~~~~~------~~g-~~vl-~~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~-------------~~ 117 (359)
+.+.. +++ .+|+ +...+|..+.. + ..+.|.. +..++.+..+. ..
T Consensus 169 KlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~--a-~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 245 (504)
T PLN02760 169 KLVWYYNNALGRPNKKKFIARSKSYHGSTLI--S-ASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRL 245 (504)
T ss_pred HHHHHHHHhcCCCCCcEEEEECCCccCChHh--h-hhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHH
Confidence 98852 122 3455 45556666543 1 2222211 11111111000 01
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccc-cchhhhcCchhHhhh
Q 018240 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARI-FNAAVALGVPVRRLV 195 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~-~~~~~~~~~~~~~~~ 195 (359)
.+++++.+.+. +..++.+|++++...+ .|. ..|.+++++++++|++||+++|+||++. +|-.+. ......+.
T Consensus 246 ~~~le~~l~~~----~~~~iAAvI~EPv~g~-gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~-~~a~e~~g 319 (504)
T PLN02760 246 ADNLENLILKE----GPETIAAFIAEPVMGA-GGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGT-MFGCDKYN 319 (504)
T ss_pred HHHHHHHHHhc----CCCceEEEEECCccCC-CCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccch-hhHHHhcC
Confidence 24466666421 1146889999998884 465 4567999999999999999999999983 444332 11112222
Q ss_pred cCccEEEEeccccCCC---ceeeEEecCHHHHHHHHHHH-----HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHH
Q 018240 196 QAADSASVCLSKGLGA---PVGSVIVGSKEFIKKARRLR-----KTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKK 266 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~---~~gg~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~ 266 (359)
-.+|+ .+++|.+|+ |.|+ +++++++.+.+.... ...+.+++.+++.++++...++...+ +..++..++
T Consensus 320 v~PDi--vtlgK~lggG~~PigA-v~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~ 396 (504)
T PLN02760 320 IKPDL--VSLAKALSSAYMPIGA-VLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKI 396 (504)
T ss_pred CCCcE--EEecccccCCccccce-EeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 24665 466798865 4555 677888888764321 12456666778888888888876544 356677778
Q ss_pred HHHHHHHHhcCCCceEe-cCCccceEEEEEeccch---------HHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCH
Q 018240 267 AKLLAEGLNQLKGLRVD-VDAVETNIVYFEITEDS---------KLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISA 336 (359)
Q Consensus 267 ~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~ 336 (359)
.++|++.|+++....+. .-...+.++.+.+..+. ......+.+.+.++||.+.+.+ ..+|++++..+++
T Consensus 397 g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-~~lrl~Ppl~it~ 475 (504)
T PLN02760 397 APRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAG-DNIMMSPPLIITP 475 (504)
T ss_pred HHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecC-CEEEEECCCCCCH
Confidence 88888887764222111 01234556666663311 0125568888899999997654 5799999889999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 018240 337 NDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 337 ~~i~~~~~~l~~~~~~~~ 354 (359)
+|+++++++++++++++.
T Consensus 476 eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 476 EEVDELISIYGKALKATE 493 (504)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998764
No 273
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.93 E-value=3e-24 Score=181.96 Aligned_cols=201 Identities=19% Similarity=0.227 Sum_probs=161.2
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCC----C-CC-ccCCC--hHHHHHHHHHHHHhCCCC--eEEcCCchHHHHHHHHHh
Q 018240 4 RTVDLRSDTVTKPTEAMRAAMASAEV----D-DD-VLMHD--PTAFRLETEMAKVMGKEA--GLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~----~-~~-~~~~~--~~~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l~~~ 73 (359)
+.+.++++..+..++.|.++|..... + +. .|+.. ...++.|+.+|+++|++. .+||.++|+++..++...
T Consensus 43 ~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl~~v 122 (428)
T KOG1549|consen 43 RPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLVLKGV 122 (428)
T ss_pred ccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHHHHh
Confidence 56777777777667888888765322 2 12 24443 337889999999999975 378889999999999988
Q ss_pred hhhcCC----eEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC
Q 018240 74 CETRGS----EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC 149 (359)
Q Consensus 74 ~~~~g~----~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p 149 (359)
....++ +|++....|.+........+..|++++.+|.+.++.+|.+.+++.|+ ++|++|.+.+..| .
T Consensus 123 ~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~--------~~T~lv~I~~Vnn-~ 193 (428)
T KOG1549|consen 123 ARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIR--------SKTRLVSIMHVNN-E 193 (428)
T ss_pred hccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcC--------CCceEEEEEeccc-C
Confidence 654565 89999999999876333345578899999999889999999999999 8999999977776 6
Q ss_pred CceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCH
Q 018240 150 GGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSK 221 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~ 221 (359)
+|+..| +++|.++|+++|+.+++|.||+.|.. .....++ ++|+++++.|||+|.|+-|++++++
T Consensus 194 ~gv~~P---v~EI~~icr~~~v~v~~DaAQavG~i---~vDV~el--n~D~~s~s~HK~ygp~~iGaLYvr~ 257 (428)
T KOG1549|consen 194 IGVLQP---VKEIVKICREEGVQVHVDAAQAVGKI---PVDVQEL--NADFLSISAHKIYGPPGIGALYVRR 257 (428)
T ss_pred cccccc---HHHHHHHhCcCCcEEEeehhhhcCCc---cccHHHc--CchheeeecccccCCCcceEEEEcc
Confidence 799999 89999999999999999999977655 4556666 8999999999999966558888875
No 274
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.93 E-value=2.7e-22 Score=179.94 Aligned_cols=338 Identities=17% Similarity=0.151 Sum_probs=216.2
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCc----cCCChHHHHHHHHHHHHhCCC---CeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDV----LMHDPTAFRLETEMAKVMGKE---AGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~l~~~la~~~~~~---~~~~~~~gt~a~~~~l~ 71 (359)
.++|||.++ +....+|.+.+++.+....... +...+...++.+.+++.++.. ...+++||++|+..+++
T Consensus 42 ~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~Aik 121 (445)
T PRK08593 42 KTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIK 121 (445)
T ss_pred CEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHH
Confidence 357899776 4445569999888876543221 234677788999999988543 45788999999999999
Q ss_pred HhhhhcCC-eEEe-cCCCcceeeccccccccCC-------------ccceeeecCCCC-----CCC-------HHHHHHH
Q 018240 72 VHCETRGS-EVIL-GDNSHIHIYENGGISTIGG-------------VHPRTVKNNQDG-----TMD-------IDLIEAA 124 (359)
Q Consensus 72 ~~~~~~g~-~vl~-~~~~~~~~~~~~~~~~~~g-------------~~~~~v~~~~~~-----~~~-------~~~l~~~ 124 (359)
.+..-.|. +|+. ...+|..+.. + ....+ ..+..++.++.. ..+ ++.+++.
T Consensus 122 lAr~~tgr~~ii~~~~~YHG~t~~--a-ls~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (445)
T PRK08593 122 FARAYTGRPYIISFTNAYHGSTYG--S-LSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEM 198 (445)
T ss_pred HHHHhhCCCeEEEECCCcCCCcHH--H-HhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHH
Confidence 87643443 4554 4455555432 1 11111 012223322111 011 1344444
Q ss_pred hcCCCCCccCCceeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEE
Q 018240 125 IRDPKGEIVYPTTRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSA 201 (359)
Q Consensus 125 l~~~~~~~~~~~~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~ 201 (359)
+++.. ...++++|++++..++ +|.. .|.+++++++++|++||+++|+||++... +..|.. ...+...+|++
T Consensus 199 ~~~~~---~~~~iAavI~EPv~g~-gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~--GrtG~~~a~~~~gv~pDi~ 272 (445)
T PRK08593 199 FEKYL---PADEVACIVIETIQGD-GGLLEPVPGYFEALYKFCREHGILFAVDDIQQGL--GRTGKWSSISHFNITPDLM 272 (445)
T ss_pred HHhhc---CCCceEEEEEccccCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCC--CcCchHHHHHhcCCCCCEe
Confidence 43210 0157899999998884 5665 78899999999999999999999997422 122321 11222245655
Q ss_pred EEeccccCCCce-eeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC--
Q 018240 202 SVCLSKGLGAPV-GSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL-- 277 (359)
Q Consensus 202 ~~s~~K~~g~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~-- 277 (359)
+++|.+++.. .|++++++++.+.+.. .....++..++..++++...++...+ +..++..++.++|++.|+++
T Consensus 273 --t~gK~l~~G~p~gav~~~~~i~~~~~~--~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~ 348 (445)
T PRK08593 273 --SFGKSLAGGMPMSAIVGRKEIMESLEA--PAHLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVS 348 (445)
T ss_pred --eecccccCCcccEEEEEcHHHHhhhcc--CCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh
Confidence 6678886432 3668888898887642 23344566677778878888865443 35566667777777777653
Q ss_pred --CCceEecCCccceEEEEEeccc------hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 278 --KGLRVDVDAVETNIVYFEITED------SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 278 --~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
|.+. .. ...+.++.+.+..+ .......+...|.++||.+.+.+...+|+.++..++++|+++++++++++
T Consensus 349 ~~~~v~-~v-rG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 426 (445)
T PRK08593 349 KYNFVG-DV-RGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVAGNVLRFQPPLVITYEQLDTALNTIEQA 426 (445)
T ss_pred cCCcEE-EE-eccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEeccCCCEEEEECCCccCHHHHHHHHHHHHHH
Confidence 2221 11 23455544544321 11245678889999999997655688999999999999999999999999
Q ss_pred HHHHHh
Q 018240 350 YAGVCE 355 (359)
Q Consensus 350 ~~~~~~ 355 (359)
++++..
T Consensus 427 l~~~~~ 432 (445)
T PRK08593 427 FTALEA 432 (445)
T ss_pred HHHHhc
Confidence 988754
No 275
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.93 E-value=2.6e-22 Score=181.44 Aligned_cols=302 Identities=16% Similarity=0.255 Sum_probs=198.8
Q ss_pred CCccCCChHHHHHHHHHHHHh----CC------------C---CeEEcCCchHHHHHHHHHhhhh---------------
Q 018240 31 DDVLMHDPTAFRLETEMAKVM----GK------------E---AGLFVPSGTMGNLISVLVHCET--------------- 76 (359)
Q Consensus 31 ~~~~~~~~~~~~l~~~la~~~----~~------------~---~~~~~~~gt~a~~~~l~~~~~~--------------- 76 (359)
...+..+|...++|+.+.+|+ +. + .++++++||+|++.++..++.+
T Consensus 118 ~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~g 197 (522)
T TIGR03799 118 LVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREG 197 (522)
T ss_pred cceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhcccccccccccccc
Confidence 334556777777777766554 21 1 2588999999999999988642
Q ss_pred ----------cCCeEEecCCCcceeeccccccccCCc---cceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEe
Q 018240 77 ----------RGSEVILGDNSHIHIYENGGISTIGGV---HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLE 143 (359)
Q Consensus 77 ----------~g~~vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~ 143 (359)
++..|++++..|++..+ + +...|+ +++.++.++++.+|++.|++.+++... .+++.+++.
T Consensus 198 l~~~~~~~~~~~~~v~~S~~~H~S~~k-a--a~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~----~g~~~~~vv 270 (522)
T TIGR03799 198 LFAALKHYGYDGLAILVSERGHYSLGK-A--ADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAE----QNIKPLAIV 270 (522)
T ss_pred chhhhhhccCCceEEEECCCchHHHHH-H--HHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHH----CCCCcEEEE
Confidence 12358899999999876 3 555565 688889889999999999999973211 233344332
Q ss_pred -ccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh---hcCccEEEEeccccCCCcee-eEEe
Q 018240 144 -NTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL---VQAADSASVCLSKGLGAPVG-SVIV 218 (359)
Q Consensus 144 -~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~~d~~~~s~~K~~g~~~g-g~~~ 218 (359)
...++.||.+-| +++|.++|+++|+++++|.|++.+... ......+ ...+|+++++.|||+++|.| |+++
T Consensus 271 ataGtt~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~--~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~ll 345 (522)
T TIGR03799 271 GVAGTTETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLL--SNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVL 345 (522)
T ss_pred EEecCcCCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHh--CHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEE
Confidence 344457888766 899999999999999999997544332 1111111 13689999999999999988 7666
Q ss_pred c-CHHHHHHHHHHHHhh-------------CCCcchhHHHHHHHHHHH-HHhHHHHhhhHHHHHHHHHHHHhcCCCceEe
Q 018240 219 G-SKEFIKKARRLRKTL-------------GGGMRQVGVLCAAALVAL-QENVLVMLDGDHKKAKLLAEGLNQLKGLRVD 283 (359)
Q Consensus 219 ~-~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~ 283 (359)
. +++..+.+.....+. ..+.+...+..++++..+ ....+...++..++++++.+.|++.|++++.
T Consensus 346 vr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~ 425 (522)
T TIGR03799 346 FKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELV 425 (522)
T ss_pred EeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEe
Confidence 5 555555443211110 011111111222333333 3455568888889999999999999999987
Q ss_pred cCCccceEEEEEeccch----------------H----HHHHHHHHHHHhcCceecc-----C------CCcEEEEEe-C
Q 018240 284 VDAVETNIVYFEITEDS----------------K----LYAACLLKKLEEHGVLVMP-----E------SSTRVRIVV-H 331 (359)
Q Consensus 284 ~~~~~~~~~~~~~~~~~----------------~----~~~~~~~~~l~~~gi~~~~-----~------~~~~lRi~~-~ 331 (359)
.+ +..+++.|++.+.. . .-...+.+++.+.|...+. . +...+|+++ +
T Consensus 426 ~~-p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~n 504 (522)
T TIGR03799 426 TE-PELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLAN 504 (522)
T ss_pred cC-CCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecC
Confidence 64 46677887764311 0 0123566666677876522 1 225699985 7
Q ss_pred CCCCHHHHHHHHHH
Q 018240 332 HQISANDVHYTLSC 345 (359)
Q Consensus 332 ~~~~~~~i~~~~~~ 345 (359)
+..++++++.+++.
T Consensus 505 p~tt~~~i~~~l~~ 518 (522)
T TIGR03799 505 PLTTHEILQDILDE 518 (522)
T ss_pred CCCCHHHHHHHHHH
Confidence 78889999887753
No 276
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.92 E-value=4.1e-23 Score=196.54 Aligned_cols=301 Identities=14% Similarity=0.125 Sum_probs=211.0
Q ss_pred hHHHHHHHHHHHHhCCCCeEEcCCch----HHHHHHHHHhhhhcCC----eEEecCCCcceeeccccccccCCccceeee
Q 018240 38 PTAFRLETEMAKVMGKEAGLFVPSGT----MGNLISVLVHCETRGS----EVILGDNSHIHIYENGGISTIGGVHPRTVK 109 (359)
Q Consensus 38 ~~~~~l~~~la~~~~~~~~~~~~~gt----~a~~~~l~~~~~~~g~----~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~ 109 (359)
+...++++.+++++|.+..+++.+++ .++..++.++...+|+ .|+++...|.+... .+.+.|++++.++
T Consensus 568 ~~~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a---~a~~~G~~vv~v~ 644 (993)
T PLN02414 568 EMFEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPA---SAAMCGMKIVVVG 644 (993)
T ss_pred HHHHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHH---HHHHCCCEEEEec
Confidence 44579999999999998888888877 7899999998754477 89999999998774 4667899999999
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc
Q 018240 110 NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV 189 (359)
Q Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 189 (359)
.+.+|.+|+++|++.++.+. +++++|++.++.+ -+|...+ +++|+++|+++|+++++|.++..+... -.
T Consensus 645 ~d~~G~vDle~L~~~i~~~~-----~~ta~V~vt~pSn-~gg~e~~---I~eI~~iah~~Galv~vDgAq~~a~~~--l~ 713 (993)
T PLN02414 645 TDAKGNINIEELRKAAEAHK-----DNLAALMVTYPST-HGVYEEG---IDEICDIIHDNGGQVYMDGANMNAQVG--LT 713 (993)
T ss_pred cCCCCCcCHHHHHHHHhccC-----CCeEEEEEECCCc-cccccch---HHHHHHHHHHcCCEEEEEecCHHhccC--cC
Confidence 88899999999999998321 2688998855544 6777544 899999999999999999997443221 11
Q ss_pred hhHhhhcCccEEEEeccccCCCce-----e-eEEecCHHHHHHHHHHH--H---------hh-CCCcchhH----HHHHH
Q 018240 190 PVRRLVQAADSASVCLSKGLGAPV-----G-SVIVGSKEFIKKARRLR--K---------TL-GGGMRQVG----VLCAA 247 (359)
Q Consensus 190 ~~~~~~~~~d~~~~s~~K~~g~~~-----g-g~~~~~~~~~~~~~~~~--~---------~~-~~~~~~~~----~~~~~ 247 (359)
....+ ++|++.+|.||+|++|. | |++.+++++...+.... . .. .++.+..+ ..+..
T Consensus 714 ~p~~~--GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~ 791 (993)
T PLN02414 714 SPGFI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPI 791 (993)
T ss_pred Ccccc--CCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHH
Confidence 22233 89999999999997653 2 78888887766643210 0 00 11211111 11111
Q ss_pred HHHHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCcc-ceEEEEEec---cchHHHHHHHHHHHHhcCcee-
Q 018240 248 ALVAL----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVE-TNIVYFEIT---EDSKLYAACLLKKLEEHGVLV- 318 (359)
Q Consensus 248 ~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~l~~~gi~~- 318 (359)
++..+ .+.+.+..+....+++|+++.|++..++.+..+... ..-+.+.+. ...+.+..++.++|.++||..
T Consensus 792 A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihap 871 (993)
T PLN02414 792 SYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAP 871 (993)
T ss_pred HHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEe
Confidence 12222 234443566677899999999987434433211111 111223333 111346688999999999976
Q ss_pred ---ccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 319 ---MPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 319 ---~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
.| ..+.+|++++...+++|+|+++++|..+..+..+
T Consensus 872 t~~~p-v~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 872 TMSWP-VPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred eeccc-cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 23 3678999999999999999999999999888764
No 277
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.92 E-value=4.2e-23 Score=181.88 Aligned_cols=299 Identities=19% Similarity=0.215 Sum_probs=195.9
Q ss_pred hHHHHHHHHHHHHhCCC---CeEEcCCch-HHHHHHHHHhhhh--cCCeEEecCCCcceeeccccccccCCccceeeec-
Q 018240 38 PTAFRLETEMAKVMGKE---AGLFVPSGT-MGNLISVLVHCET--RGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN- 110 (359)
Q Consensus 38 ~~~~~l~~~la~~~~~~---~~~~~~~gt-~a~~~~l~~~~~~--~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~- 110 (359)
....++++.+++++|.+ .++++++|| .++.+++.++..+ +++.|++++.+|.+..+ + +...|++++.++.
T Consensus 105 ~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~k-A--i~~~G~~pv~Vd~~ 181 (444)
T TIGR03531 105 KLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIK-A--ISTAGFEPRVIETV 181 (444)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHH-H--HHHcCCeEEEeeee
Confidence 34588899999999998 678999999 6888887776632 58899999999999886 4 7788999999974
Q ss_pred --CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcC
Q 018240 111 --NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALG 188 (359)
Q Consensus 111 --~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~ 188 (359)
++++.+|+++|+++|++.. ++..++++.+++ |+.....+++++|.++|++||+++|+|+||+.+......
T Consensus 182 ~d~~~~~iD~e~Le~aIt~~~-----~kai~~Vv~Tp~---t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~ 253 (444)
T TIGR03531 182 LDGDELTTDVEDIERAIEEIG-----PDNILCVLSTTS---CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYME 253 (444)
T ss_pred ecCcCCCcCHHHHHHHHHhcc-----CCCEEEEEEcCC---cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhh
Confidence 4668899999999998310 134455542333 344344567999999999999999999998653322111
Q ss_pred chhHhhhc-CccEEEEeccccCCCcee-eEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHH-HHhHHHHhhhHH
Q 018240 189 VPVRRLVQ-AADSASVCLSKGLGAPVG-SVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVAL-QENVLVMLDGDH 264 (359)
Q Consensus 189 ~~~~~~~~-~~d~~~~s~~K~~g~~~g-g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~ 264 (359)
.....+.. .+|++++|+||++..|.+ |+++. ++++.+.++.... +.......+..++....+ .+..++.++++.
T Consensus 254 ~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~y~--g~~~~s~~~~~~~~ll~~G~~g~~~li~~~~ 331 (444)
T TIGR03531 254 LINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKSYP--GRASASPSLDVLITLLSLGSKGYLELLKERK 331 (444)
T ss_pred hhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHhcc--CCCCChHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 10011212 369999999999988765 55545 7888877664322 111111222222223233 344455778888
Q ss_pred HHHHHHHHHHhcC---CCceEecCCccceE-EEEEeccchHHHHHHHHHHHHhcCce---ec-cCCC-------------
Q 018240 265 KKAKLLAEGLNQL---KGLRVDVDAVETNI-VYFEITEDSKLYAACLLKKLEEHGVL---VM-PESS------------- 323 (359)
Q Consensus 265 ~~~~~l~~~l~~~---~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~gi~---~~-~~~~------------- 323 (359)
++++++.+.|+++ .|..+...+ ..++ +.+.+....+.+...+...|..++|. ++ ++..
T Consensus 332 ~~a~~l~~~L~~l~~~~~~~~~~~~-~n~is~~~~~~~~~~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~ 410 (444)
T TIGR03531 332 EMYKYLKELLQKLAERHGERLLDTP-ENPISSAMTLSTLKGKDPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCEFKGYGS 410 (444)
T ss_pred HHHHHHHHHHHHHHHhhCcEeecCC-CCceeEEEecccccccCHHHHHHHHHhCCCCCceeecCCCceEECCEEeecccc
Confidence 8888888888875 255554222 2222 33444421123677888888777663 22 2210
Q ss_pred -------cEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 324 -------TRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 324 -------~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
.++-+....+++++|+|.++++|++++
T Consensus 411 ~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 411 HTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred cccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 023444555789999999999998763
No 278
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.92 E-value=2.4e-22 Score=180.76 Aligned_cols=333 Identities=16% Similarity=0.167 Sum_probs=211.4
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC--cc--CCChHHHHHHHHHHHHhCC---CCeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD--VL--MHDPTAFRLETEMAKVMGK---EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~--~~--~~~~~~~~l~~~la~~~~~---~~~~~~~~gt~a~~~~l~ 71 (359)
.++|||.++ +....+|++.+++.+...... .+ ...+...++.+.+++.++. +..++++||++|+..+++
T Consensus 56 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~Alk 135 (443)
T PRK06058 56 NRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVK 135 (443)
T ss_pred CEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHH
Confidence 357899886 344556899988887654321 11 2356667888888888753 346889999999999999
Q ss_pred HhhhhcC-CeEEecCCCcceeeccccccccCC--------c-----cceeeecCCCCC------CC--------HHHHHH
Q 018240 72 VHCETRG-SEVILGDNSHIHIYENGGISTIGG--------V-----HPRTVKNNQDGT------MD--------IDLIEA 123 (359)
Q Consensus 72 ~~~~~~g-~~vl~~~~~~~~~~~~~~~~~~~g--------~-----~~~~v~~~~~~~------~~--------~~~l~~ 123 (359)
.+..-.| ++|+....+|..... ++ ..+.+ . .+..++....++ .+ .+.+++
T Consensus 136 lAr~~tgr~~ii~~~~~yHG~t~-~a-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 213 (443)
T PRK06058 136 IARSYTGRQAVVVFDHAYHGRTN-LT-MALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEK 213 (443)
T ss_pred HHHHhhCCCeEEEECCCcCcChH-HH-HhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHH
Confidence 7764223 456665555443331 11 11111 0 111111111110 01 112223
Q ss_pred HhcCCCCCccCCceeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh--HhhhcCccE
Q 018240 124 AIRDPKGEIVYPTTRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV--RRLVQAADS 200 (359)
Q Consensus 124 ~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~~d~ 200 (359)
.+.. .++++|++++...+ +|.. .+.+++++|+++|++||+++|+||++..... .+... ..+...+|+
T Consensus 214 ~~~~-------~~iAavi~EPi~g~-gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgR--tG~~fa~~~~gv~PDi 283 (443)
T PRK06058 214 QVGA-------DNLAAVIIEPIQGE-GGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFAR--TGAWFACEHEGIVPDL 283 (443)
T ss_pred hhCC-------CceEEEEECCccCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc--ChhhhHHHhcCCCCCE
Confidence 2221 57899999887764 4655 5679999999999999999999999753222 23221 112235677
Q ss_pred EEEeccccCCCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcCC
Q 018240 201 ASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQLK 278 (359)
Q Consensus 201 ~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~~ 278 (359)
+++ +|.++++.. |++++++++.+.+... ..+.++..+++.++++...++...+ +..++..++.++|.+.|+++.
T Consensus 284 v~~--gK~l~~G~Pi~av~~~~~i~~~~~~~--~~~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~ 359 (443)
T PRK06058 284 ITT--AKGIAGGLPLSAVTGRAEIMDAPHPG--GLGGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALA 359 (443)
T ss_pred EEE--cccccCCCccEEEEEcHHHHhhccCC--CCCCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 655 588864322 5677788888776422 3456666778888888888876433 355667777888888887641
Q ss_pred ---CceEecCCccceEEEEEeccc-----hHHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018240 279 ---GLRVDVDAVETNIVYFEITED-----SKLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 279 ---g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
++.... ...+.++.+.+..+ .......+.+.+.++||.+.+.+ ..++|+.++..++++++++++++|++
T Consensus 360 ~~~~~i~~v-rg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~Ppl~~t~~~i~~~~~~l~~ 438 (443)
T PRK06058 360 AEDDRIGDV-RGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGTYGNVIRLLPPLVIGDELLREGLDVLEA 438 (443)
T ss_pred hhCCcEEee-eccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCccCHHHHHHHHHHHHH
Confidence 221111 33566666655321 11235667888889999997754 46899999889999999999999999
Q ss_pred HHHH
Q 018240 349 IYAG 352 (359)
Q Consensus 349 ~~~~ 352 (359)
++++
T Consensus 439 ~l~~ 442 (443)
T PRK06058 439 ALAD 442 (443)
T ss_pred HHHh
Confidence 9865
No 279
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.92 E-value=2.9e-22 Score=178.68 Aligned_cols=337 Identities=16% Similarity=0.162 Sum_probs=217.8
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC----ccCCChHHHHHHHHHHHHhCC---CCeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD----VLMHDPTAFRLETEMAKVMGK---EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~----~~~~~~~~~~l~~~la~~~~~---~~~~~~~~gt~a~~~~l~ 71 (359)
.++|||.++ +....+|.+.+++.+...... .....+...++-+.+++.++. +...+++||++|+..+++
T Consensus 40 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~Alk 119 (425)
T PRK07495 40 RRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVK 119 (425)
T ss_pred CEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHH
Confidence 357899887 445556999999987654321 123356677888888888853 356899999999999999
Q ss_pred HhhhhcC-CeEEecC-CCcceeeccccccccCC-------------ccceeeecCCC-CCCC----HHHHHHHhcCCCCC
Q 018240 72 VHCETRG-SEVILGD-NSHIHIYENGGISTIGG-------------VHPRTVKNNQD-GTMD----IDLIEAAIRDPKGE 131 (359)
Q Consensus 72 ~~~~~~g-~~vl~~~-~~~~~~~~~~~~~~~~g-------------~~~~~v~~~~~-~~~~----~~~l~~~l~~~~~~ 131 (359)
.+..-+| .+|+... .+|+.+.. + ....+ ..++.++.+.+ ...+ ++.+++.+++..
T Consensus 120 lAr~~tgr~~ii~~~~~yHG~t~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~-- 194 (425)
T PRK07495 120 IARAATGRSAVIAFGGGFHGRTFM--G-MSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADV-- 194 (425)
T ss_pred HHHHhhCCCeEEEECCCcCCccHH--H-hhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhcc--
Confidence 8875333 3455444 45544321 1 11111 01223333211 1122 344566664210
Q ss_pred ccCCceeEEEEeccccCCCc-eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEecccc
Q 018240 132 IVYPTTRLICLENTHANCGG-RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSKG 208 (359)
Q Consensus 132 ~~~~~~~~v~i~~~~~~ptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K~ 208 (359)
...++++|++++..++ +| ..+|.+++++|+++|++||+++|+||++.. +...+.. .......+| +.+++|.
T Consensus 195 -~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG--~gr~G~~~a~~~~gv~pD--i~tlsK~ 268 (425)
T PRK07495 195 -DPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTG--FARTGKLFAMEHHEVAAD--LTTMAKG 268 (425)
T ss_pred -CCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhc--CCcCCCceeecccCCCCC--EEeehhh
Confidence 1157899999999987 77 457889999999999999999999999752 2223322 111212345 4577898
Q ss_pred CCCce-eeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC----CCceE
Q 018240 209 LGAPV-GSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL----KGLRV 282 (359)
Q Consensus 209 ~g~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~----~g~~~ 282 (359)
++++. .|++++++++.+.+.. ...+.++..+++.++++...++...+ ...++..++.++|++.|+++ |.+.-
T Consensus 269 l~~G~pigav~~~~~i~~~~~~--~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~ 346 (425)
T PRK07495 269 LAGGFPLAAVTGRAEIMDAPGP--GGLGGTYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQRLASLRETVPEIAD 346 (425)
T ss_pred hcCCccceEEEEcHHHHhccCC--CCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhhCCCeee
Confidence 86433 2678888888877542 22445566677777777777755433 24455666667777766653 32221
Q ss_pred ecCCccceEEEEEeccch-----HHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 283 DVDAVETNIVYFEITEDS-----KLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
. ...+.++++.+..+. ......+.+.+.++|+.+.+.+ .+.+|+.++..++++++++++++|+++++++.
T Consensus 347 v--rG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 347 I--RGPGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCGVHGNVIRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred e--ecCceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 1 245788888875421 1124578888889999986543 47899999999999999999999999998764
No 280
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.92 E-value=2.4e-22 Score=179.07 Aligned_cols=334 Identities=15% Similarity=0.156 Sum_probs=210.0
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCC-Ccc---CCChHHHHHHHHHHHHhC----CC-CeEEc-CCchHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDD-DVL---MHDPTAFRLETEMAKVMG----KE-AGLFV-PSGTMGNLI 68 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~-~~~---~~~~~~~~l~~~la~~~~----~~-~~~~~-~~gt~a~~~ 68 (359)
.++|||.++ +....+|.+.+++.+..... ... ...+...++.+.+++... .. ...++ +||++|+..
T Consensus 35 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~ 114 (412)
T TIGR02407 35 KEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVES 114 (412)
T ss_pred CEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHH
Confidence 367899876 33455699999998865431 111 124556677777877642 22 23454 799999999
Q ss_pred HHHHhhhhcC-CeEEec-CCCcceeeccccccccCC------------ccceeeecCCCCC---CCHHHHHHHhcCCCCC
Q 018240 69 SVLVHCETRG-SEVILG-DNSHIHIYENGGISTIGG------------VHPRTVKNNQDGT---MDIDLIEAAIRDPKGE 131 (359)
Q Consensus 69 ~l~~~~~~~g-~~vl~~-~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~---~~~~~l~~~l~~~~~~ 131 (359)
+++.+...+| .+|+.- ..+|..+.. + ....+ ..+..++.+.... -+++.+++.++++...
T Consensus 115 AlklAr~~tgr~~ii~~~~~yHG~t~~--a-ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~ 191 (412)
T TIGR02407 115 ALKLARKVTGRSNVVSFTNAFHGMTLG--S-LSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSG 191 (412)
T ss_pred HHHHHhhhcCCCeEEEECCCcCCchHH--H-HHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCC
Confidence 9999875444 346544 445544332 1 11111 0122233221110 1466788888643211
Q ss_pred ccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh--HhhhcCccEEEEecccc
Q 018240 132 IVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV--RRLVQAADSASVCLSKG 208 (359)
Q Consensus 132 ~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~~d~~~~s~~K~ 208 (359)
.+++++|++++..+ ++|. ++|.+++++|+++|++||+++|+||++.. ++..|... ......+|++ +++|+
T Consensus 192 --~~~~aavi~Epi~g-~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG--~GRtG~~~a~~~~~v~PDi~--~~~K~ 264 (412)
T TIGR02407 192 --VDLPAAVILETVQG-EGGINVASDEWLQRLEKLCRRHDILLIVDDIQAG--CGRTGTFFSFEPAGIEPDIV--CLSKS 264 (412)
T ss_pred --CCceEEEEeccccC-CCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC--CCccchhHHhcccCCCCCEE--Eechh
Confidence 13678999988877 5777 67889999999999999999999999752 22222211 1122356765 45699
Q ss_pred CCC-cee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH-H-HHhhhHHHHHHHHHHHHhc----CCCc
Q 018240 209 LGA-PVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENV-L-VMLDGDHKKAKLLAEGLNQ----LKGL 280 (359)
Q Consensus 209 ~g~-~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~l~~~l~~----~~g~ 280 (359)
+++ ... |+++.++++ +.+. ....+.++..+++.++++...++..+ + +..++..+..+++++.|+. .|++
T Consensus 265 lg~~G~pigav~~~~~~-~~~~--~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~ 341 (412)
T TIGR02407 265 ISGYGLPLALTLIKPEL-DVWK--PGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPEL 341 (412)
T ss_pred ccCCccceeEEEEchhh-hccC--CCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 874 322 667777665 4432 12334455555666666666665422 2 2445555666666666654 3333
Q ss_pred eEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 281 RVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.. ..+..+.++++.++.. .....+.+.+.++||.+.+.+ .+.+|++++..++++++++++++|++++++
T Consensus 342 ~~-~vrg~Gl~~~l~l~~~--~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 342 IK-QVRGRGLMQGIECGDG--DLAGKIAKAAFENGLIIETSGPNDEVIKLLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred eE-eeecceeEEEEEecCh--HHHHHHHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence 32 2245788889998752 356788999999999997644 468999999999999999999999998853
No 281
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.92 E-value=5.6e-22 Score=177.94 Aligned_cols=336 Identities=15% Similarity=0.162 Sum_probs=218.4
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCC----CccCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDD----DVLMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~ 72 (359)
.++|||.++ +....+|.+.+++.+..... ......+...++.+.+++.++. +...+++||++|+..|++.
T Consensus 54 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKl 133 (453)
T PRK06943 54 RRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKM 133 (453)
T ss_pred CEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHH
Confidence 367899887 44555699998888755432 1122456677888889888864 3568899999999999999
Q ss_pred hhhh------c-CCeEEecCC-CcceeeccccccccCCc------------cceeeecCCCCC------------CCHHH
Q 018240 73 HCET------R-GSEVILGDN-SHIHIYENGGISTIGGV------------HPRTVKNNQDGT------------MDIDL 120 (359)
Q Consensus 73 ~~~~------~-g~~vl~~~~-~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~------------~~~~~ 120 (359)
+... + ..+|+.... +|..+.- + ....+. .+..++.+.... -+++.
T Consensus 134 A~~~~~~rg~~~r~~Ii~~~~~yHG~t~g--a-ls~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 210 (453)
T PRK06943 134 SFHAWRNRGRGDKREFVCLANGYHGETIG--A-LGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALAD 210 (453)
T ss_pred HHHHHHHhCCCCCCEEEEECCCcCCCcHH--h-hcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHH
Confidence 8421 1 245665554 4443321 1 111110 112222221100 02466
Q ss_pred HHHHhcCCCCCccCCceeEEEEecc-ccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhc
Q 018240 121 IEAAIRDPKGEIVYPTTRLICLENT-HANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQ 196 (359)
Q Consensus 121 l~~~l~~~~~~~~~~~~~~v~i~~~-~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~ 196 (359)
+++.+++.. .++.+|++++. ..+ +|. ..|.+++++++++|++||+++|+||++...... |.. ...+.-
T Consensus 211 l~~~l~~~~-----~~iAAviiEPvvqg~-gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRt--G~~fa~~~~gv 282 (453)
T PRK06943 211 VRRLFAERA-----GKIAALIVEPLVQCA-AGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRT--GTFFACEQAGV 282 (453)
T ss_pred HHHHHHhCC-----CceEEEEEecccccc-CCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCC--cchhHHHhCCC
Confidence 777776321 57999999994 664 455 567799999999999999999999997433222 321 112223
Q ss_pred CccEEEEeccccCCC---ceeeEEecCHHHHHHHHHHH----HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHH
Q 018240 197 AADSASVCLSKGLGA---PVGSVIVGSKEFIKKARRLR----KTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAK 268 (359)
Q Consensus 197 ~~d~~~~s~~K~~g~---~~gg~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~ 268 (359)
.+|++++ +|.+++ |. |.+++++++.+.+..-. ...++++..+++.++++...++...+ +..++..++.+
T Consensus 283 ~PDivt~--gKgl~gG~~Pi-~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~ 359 (453)
T PRK06943 283 WPDFLCL--SKGISGGYLPL-SLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLARNARKSA 359 (453)
T ss_pred CCCeEee--ehhhccCcccc-eEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 5777765 587754 33 55667888887764211 12455666678888888888876544 35566777777
Q ss_pred HHHHHHhcC---CCceEecCCccceEEEEEeccc---hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHH
Q 018240 269 LLAEGLNQL---KGLRVDVDAVETNIVYFEITED---SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYT 342 (359)
Q Consensus 269 ~l~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~ 342 (359)
+|.+.|+++ |++.-. ...+.++.+.+..+ .......+.+.+.++|+.+.+.+ ..+|++++..+++++++++
T Consensus 360 ~l~~~L~~l~~~~~v~~v--rG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~g-~~l~~~Ppl~it~~eid~~ 436 (453)
T PRK06943 360 RLRAALAPLAAHPQVRHL--RQRGTIFAFDVALDGDAARTFSRRFFEAALERELLLRPIG-TTVYLMPPYVLDDDEIAWL 436 (453)
T ss_pred HHHHHHHHHhcCCCEEeE--eccccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEecC-CEEEEeCCCcCCHHHHHHH
Confidence 887777664 443311 34566666666421 11125678888899999997755 4799998889999999999
Q ss_pred HHHHHHHHHHHHh
Q 018240 343 LSCFQKIYAGVCE 355 (359)
Q Consensus 343 ~~~l~~~~~~~~~ 355 (359)
+++|+++++++..
T Consensus 437 ~~~l~~al~~~~~ 449 (453)
T PRK06943 437 AERTRATLDATLA 449 (453)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988754
No 282
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.92 E-value=3.6e-22 Score=179.26 Aligned_cols=338 Identities=15% Similarity=0.156 Sum_probs=213.5
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC--cc--CCChHHHHHHHHHHHHhCC---CCeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD--VL--MHDPTAFRLETEMAKVMGK---EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~--~~--~~~~~~~~l~~~la~~~~~---~~~~~~~~gt~a~~~~l~ 71 (359)
.+++||.++ +....+|.+.+++.+...... .+ ...+...++.+.+++..+. +..++++||++|+..++.
T Consensus 41 ~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alk 120 (425)
T PRK08088 41 REYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVK 120 (425)
T ss_pred CEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHH
Confidence 357899876 333445888888877654321 11 1245556777788887764 345899999999999999
Q ss_pred Hhhhhc-CCeEEecCCCcceeeccccccccCCc-c------------cee--eecCCCCCCC----HHHHHHHhcCCCCC
Q 018240 72 VHCETR-GSEVILGDNSHIHIYENGGISTIGGV-H------------PRT--VKNNQDGTMD----IDLIEAAIRDPKGE 131 (359)
Q Consensus 72 ~~~~~~-g~~vl~~~~~~~~~~~~~~~~~~~g~-~------------~~~--v~~~~~~~~~----~~~l~~~l~~~~~~ 131 (359)
.+.... ..+|+..+++|..... +. ....+. . +.. ++.+.++ .+ ++.+++.+++..
T Consensus 121 lar~~~~r~~iv~~~~~yHG~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~l~~~l~~~~-- 195 (425)
T PRK08088 121 IARAATKRSGVIAFTGAYHGRTH-YT-LALTGKVNPYSAGMGLMPGHVYRALYPCPLHG-VSEDDAIASIERIFKNDA-- 195 (425)
T ss_pred HHHHHhCCCeEEEECCccCCccH-HH-HHhhCCCCccccCCCCCCCCcEEcCCCccccC-ccHHHHHHHHHHHHHhcc--
Confidence 876422 2345555665544432 11 111110 0 011 1111111 12 456777775210
Q ss_pred ccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh-hcCccEEEEeccccCC
Q 018240 132 IVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL-VQAADSASVCLSKGLG 210 (359)
Q Consensus 132 ~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~~d~~~~s~~K~~g 210 (359)
...++++|++++..++++....+.+++++|.++|++||+++|+||+|.. +...+.. ..+ ..+.+.-+.|++|.++
T Consensus 196 -~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g--~g~~g~~-~~~~~~~~~pdi~s~sK~l~ 271 (425)
T PRK08088 196 -APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTG--AGRTGTL-FAMEQMGVAADLTTFAKSIA 271 (425)
T ss_pred -CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcCcch-hHHhhcCCCCCEEEEecccc
Confidence 1157889999999998887888999999999999999999999999753 2222321 111 1122233568899997
Q ss_pred Ccee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHh----cCCCceEec
Q 018240 211 APVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLN----QLKGLRVDV 284 (359)
Q Consensus 211 ~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~----~~~g~~~~~ 284 (359)
.... |++++++++++.+... ....++..+++.++++...++.... +.+++..+..+++.+.|. ..|.+...
T Consensus 272 ~G~rig~v~~~~~~~~~~~~~--~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v- 348 (425)
T PRK08088 272 GGFPLAGVTGRAEVMDAIAPG--GLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDV- 348 (425)
T ss_pred CCCcceeeEecHHHHhhcCCC--CCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-
Confidence 4333 8899999998887533 2334444566777777777754322 233344444444444443 34433222
Q ss_pred CCccceEEEEEecc------chHHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 285 DAVETNIVYFEITE------DSKLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 285 ~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
...+.++|+.+.. +.......+.+.+.++||.+.+.+ ...+|++++..++++++++++++|.+++++.
T Consensus 349 -~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 349 -RGLGAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred -eccceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 2348889998832 122457789999999999887654 3789999988899999999999999998754
No 283
>PRK12403 putative aminotransferase; Provisional
Probab=99.92 E-value=5.5e-22 Score=178.55 Aligned_cols=340 Identities=15% Similarity=0.117 Sum_probs=215.3
Q ss_pred ccccccCC----CCCChHHHHHHHHHcCCCCCC----cc-CCChHHHHHHHHHHHHhC--CCCeEEcCCchHHHHHHHHH
Q 018240 4 RTVDLRSD----TVTKPTEAMRAAMASAEVDDD----VL-MHDPTAFRLETEMAKVMG--KEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 4 ~~id~~~~----~~~~~~~~~~~a~~~~~~~~~----~~-~~~~~~~~l~~~la~~~~--~~~~~~~~~gt~a~~~~l~~ 72 (359)
++|||.++ +....+|.+.+++.+...... .+ ..++...++.+.++++++ .+.+++++||++|+..+++.
T Consensus 55 ~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~Aikl 134 (460)
T PRK12403 55 RYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRT 134 (460)
T ss_pred EEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHH
Confidence 57888665 455656888888887654321 11 246778899999999987 45678999999999999999
Q ss_pred hhh------hcCCeEEe--cCCCcceeeccccccccCCcc-----------ceeeecCCC----CCC--------CHHHH
Q 018240 73 HCE------TRGSEVIL--GDNSHIHIYENGGISTIGGVH-----------PRTVKNNQD----GTM--------DIDLI 121 (359)
Q Consensus 73 ~~~------~~g~~vl~--~~~~~~~~~~~~~~~~~~g~~-----------~~~v~~~~~----~~~--------~~~~l 121 (359)
+.. ++++.+++ ...+|.++.. + ....+.. +..++.+.. +.. +.+++
T Consensus 135 Ar~~~~~~g~~~r~~ii~~~~~yHG~t~~--~-~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 211 (460)
T PRK12403 135 VRRYWQVLGKPQKKIMIGRWNGYHGSTLA--A-TALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQL 211 (460)
T ss_pred HHHHHHhhCCCCCcEEEEECCCcCcccHh--h-hhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHH
Confidence 863 12233433 3445666543 1 2222211 222221110 011 12456
Q ss_pred HHHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh--HhhhcCc
Q 018240 122 EAAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV--RRLVQAA 198 (359)
Q Consensus 122 ~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~~ 198 (359)
++.+.+. +..++.+|++++..++ .|. ..+.+++++++++|++||+++|+||++... +..|... ..+.-.+
T Consensus 212 e~~~~~~----~~~~iaavI~Epv~g~-gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGf--GRtG~~~a~e~~gv~P 284 (460)
T PRK12403 212 EEKILEL----GAENVAGFVAEPFQGA-GGMIFPPESYWPEIQRICRQYDVLLCADEVIGGF--GRTGEWFAHEHFGFEP 284 (460)
T ss_pred HHHHHHh----CCCceEEEEEccccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC--CcCchhhhhhhcCCCC
Confidence 5555321 1146889999998884 465 456799999999999999999999998432 2223221 2222346
Q ss_pred cEEEEeccccCCC---ceeeEEecCHHHHHHHHHHHH--hhCCCcchhHHHHHHHHHHHHHhHHH-HhhhHH-HHHHHHH
Q 018240 199 DSASVCLSKGLGA---PVGSVIVGSKEFIKKARRLRK--TLGGGMRQVGVLCAAALVALQENVLV-MLDGDH-KKAKLLA 271 (359)
Q Consensus 199 d~~~~s~~K~~g~---~~gg~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~-~~~~~l~ 271 (359)
|+++ ++|.+++ |.|+++ +++++.+.+..... .++.++..+++.++++...++...++ ..++.. ++.++|+
T Consensus 285 Div~--~gK~lggG~~Piga~v-~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~ 361 (460)
T PRK12403 285 DTLS--IAKGLTSGYVPMGGLV-LSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQ 361 (460)
T ss_pred CeEE--EcccccccccceEEEE-ECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 7775 6788863 555655 67788777642111 24556667788888888888765442 455564 6677777
Q ss_pred HHHhcC-C--CceEecCCccceEEEEEeccch---------HHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHH
Q 018240 272 EGLNQL-K--GLRVDVDAVETNIVYFEITEDS---------KLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDV 339 (359)
Q Consensus 272 ~~l~~~-~--g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i 339 (359)
+.|+++ . ++.... ...+.++.+.+..+. ......+.+.+.++|+.+.+.+ ..+|+++...++++++
T Consensus 362 ~~L~~l~~~~~~i~~v-rG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~-~~~~l~Ppl~it~~ei 439 (460)
T PRK12403 362 RCLREVFGDHPLVGEV-QGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRSTL-GRMIMAPALVAGRAEI 439 (460)
T ss_pred HHHHHHHhcCCCEEeE-eecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEecC-CEEEEECCCCCCHHHH
Confidence 777643 1 221111 345666666663210 0113345566788999997543 4689999888999999
Q ss_pred HHHHHHHHHHHHHHHhhcC
Q 018240 340 HYTLSCFQKIYAGVCEENG 358 (359)
Q Consensus 340 ~~~~~~l~~~~~~~~~~~~ 358 (359)
++++++++++++++.++.+
T Consensus 440 d~~~~~l~~al~~~~~~~~ 458 (460)
T PRK12403 440 DELVDKTRIAVDRTAREVG 458 (460)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999999999866544
No 284
>PLN02263 serine decarboxylase
Probab=99.92 E-value=2.1e-22 Score=177.06 Aligned_cols=288 Identities=19% Similarity=0.174 Sum_probs=199.3
Q ss_pred HHHHHHHHHHhCCCC----eEEcCCchHHHHHHHHHhhhh-cCCeEEecCCCcceeeccccccccCCccceeeecCCCCC
Q 018240 41 FRLETEMAKVMGKEA----GLFVPSGTMGNLISVLVHCET-RGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 41 ~~l~~~la~~~~~~~----~~~~~~gt~a~~~~l~~~~~~-~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 115 (359)
.++-+.+++++|.+. ++++++||++++.++.+++.. +...+++++.+|++..+ + +.+.|++++.|+.+.++.
T Consensus 136 ~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~K-A--a~llgi~~~~Vp~d~~g~ 212 (470)
T PLN02263 136 VGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK-A--ARMYRMECVKVDTLVSGE 212 (470)
T ss_pred HHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHH-H--HHhcCCcceEeccCCCCc
Confidence 344455667778753 589999999999999999853 23468899999999887 4 888899999999999999
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCc-----EEEEecccccchhhhc-Cc
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGL-----KLHIDGARIFNAAVAL-GV 189 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~-----~li~D~a~~~~~~~~~-~~ 189 (359)
+|++.|++.|++.. .++-+| +.+...+++|.+= ++++|.++|+++|+ |++||+|++....+.. ..
T Consensus 213 mD~~aL~~aI~~d~-----~~P~iV-vataGTT~~GAiD---pi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~ 283 (470)
T PLN02263 213 IDCADFKAKLLANK-----DKPAII-NVNIGTTVKGAVD---DLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRA 283 (470)
T ss_pred CcHHHHHHHHHhCC-----CCcEEE-EEEecCCCCcCCC---CHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccc
Confidence 99999999998421 123344 4477888889864 49999999999997 9999999643333221 11
Q ss_pred hhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHHhhC------CCcch--hHHHHHHHHHHH-HHhHHHH
Q 018240 190 PVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRKTLG------GGMRQ--VGVLCAAALVAL-QENVLVM 259 (359)
Q Consensus 190 ~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~l-~~~~~~~ 259 (359)
....+...+|.+++++|||++.|.+ |+++.++...+.+.....+.. .+.+. ..+..++.+..+ .+...+.
T Consensus 284 ~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~ 363 (470)
T PLN02263 284 PKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKE 363 (470)
T ss_pred cccCCCcCccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHH
Confidence 1122333589999999999999988 777776554433322111111 11111 122223333333 3445558
Q ss_pred hhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHH
Q 018240 260 LDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDV 339 (359)
Q Consensus 260 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i 339 (359)
.++..++++++.+.|++. ++.....| .++.+.|..+.. . +..+|..+... +..+++++.+.++.+.+
T Consensus 364 i~~~~~~A~~l~~~l~~~-g~~~~~~p-~s~~V~f~~p~~----~------~~~~gW~L~~~-~~~~Hivvmphv~~~~i 430 (470)
T PLN02263 364 VQKCLRNAHYLKDRLREA-GISAMLNE-LSSTVVFERPKD----E------EFVRRWQLACQ-GNIAHVVVMPSVTIEKL 430 (470)
T ss_pred HHHHHHHHHHHHHHHHhC-CCeEEeCC-CceEEEEecCch----H------HhhcceEEccC-CCcEEEEEcCCCCHHHH
Confidence 888889999999999998 88765544 566666654431 1 12467777553 35799999888899999
Q ss_pred HHHHHHHHHHHHHH
Q 018240 340 HYTLSCFQKIYAGV 353 (359)
Q Consensus 340 ~~~~~~l~~~~~~~ 353 (359)
+++++.|++..+..
T Consensus 431 d~fi~DL~~~~~~~ 444 (470)
T PLN02263 431 DYFLKELVEKRSTW 444 (470)
T ss_pred HHHHHHHHHHHhhh
Confidence 99999998887643
No 285
>PRK06105 aminotransferase; Provisional
Probab=99.92 E-value=6e-22 Score=178.29 Aligned_cols=341 Identities=15% Similarity=0.068 Sum_probs=219.0
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC---cc--CCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD---VL--MHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~---~~--~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~ 71 (359)
.++|||.++ +....+|++.+++.+...... .+ ...+...++.+.|++.++. +.+.+++||++|+..+++
T Consensus 48 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlK 127 (460)
T PRK06105 48 KRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVK 127 (460)
T ss_pred CEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHH
Confidence 367999886 445556899999887654321 11 1356667888999998854 356888999999999999
Q ss_pred Hhhhh------c-CCeEEe-cCCCcceeeccccccccCCc------------cceeeecCCCCCC-------------CH
Q 018240 72 VHCET------R-GSEVIL-GDNSHIHIYENGGISTIGGV------------HPRTVKNNQDGTM-------------DI 118 (359)
Q Consensus 72 ~~~~~------~-g~~vl~-~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~~-------------~~ 118 (359)
.+... + ..+|+. ...+|..+.. + ....+. .+..++.+..... ..
T Consensus 128 lar~~~~~~g~t~r~~il~~~~~yHG~t~~--a-~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 204 (460)
T PRK06105 128 LVWYYNNALGRPEKKKIISRQRGYHGVTIA--S-ASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLA 204 (460)
T ss_pred HHHHHHHhcCCCCCcEEEEecCccCCcchh--h-eeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHH
Confidence 87521 1 235664 4555555432 1 121111 1111221111100 13
Q ss_pred HHHHHHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccc-cchhhhcCchhHhhhc
Q 018240 119 DLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARI-FNAAVALGVPVRRLVQ 196 (359)
Q Consensus 119 ~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~-~~~~~~~~~~~~~~~~ 196 (359)
+++++.+.+. +..++.+|++++...+ .|. ..|.+++++++++|++||+++|+||++. +|-.+. ......+.-
T Consensus 205 ~~le~~~~~~----~~~~iAavIvEPiqg~-gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~-~f~~~~~~v 278 (460)
T PRK06105 205 NELEALILAE----GPDTIAAFIGEPVMGA-GGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGN-MFGCETFGI 278 (460)
T ss_pred HHHHHHHHHc----CCCceEEEEEccccCC-CCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCch-hhhHHhcCC
Confidence 5667766421 0146899999998874 455 5678999999999999999999999983 433321 111112222
Q ss_pred CccEEEEeccccCCCce--eeEEecCHHHHHHHHHHHH-----hhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHH
Q 018240 197 AADSASVCLSKGLGAPV--GSVIVGSKEFIKKARRLRK-----TLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAK 268 (359)
Q Consensus 197 ~~d~~~~s~~K~~g~~~--gg~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~ 268 (359)
.+|++ +++|.+++.. .|.+++++++.+.+..... .+++++..+++.++++...++...+ +..++..++.+
T Consensus 279 ~PDi~--~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~ 356 (460)
T PRK06105 279 KPDIL--VMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERDLVGNAAERGA 356 (460)
T ss_pred CCCee--eeecccccCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 56655 5568886531 3567778888877643211 1456667778888888888876544 35677778888
Q ss_pred HHHHHHhcCCCceE-ecCCccceEEEEEeccch---------HHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHH
Q 018240 269 LLAEGLNQLKGLRV-DVDAVETNIVYFEITEDS---------KLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISAND 338 (359)
Q Consensus 269 ~l~~~l~~~~g~~~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~ 338 (359)
+|++.|+++....+ ..-...+.++.+.+..+. ...+..+...+.++|+.+.+.+ +.+|++++..++++|
T Consensus 357 ~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~g-~~i~l~Ppl~it~~e 435 (460)
T PRK06105 357 RLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAMG-DTLAFCPPLIITAAQ 435 (460)
T ss_pred HHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEecC-CEEEEECCCccCHHH
Confidence 88888876522221 111235555556553210 1124578888899999997754 589999988899999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 018240 339 VHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 339 i~~~~~~l~~~~~~~~~ 355 (359)
++++++++.++++++..
T Consensus 436 id~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 436 VDEMVDRFGRALDDVAA 452 (460)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988754
No 286
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.92 E-value=4.8e-22 Score=177.60 Aligned_cols=334 Identities=16% Similarity=0.141 Sum_probs=214.1
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCc--c--CCChHHHHHHHHHHHHhCC---CCeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDV--L--MHDPTAFRLETEMAKVMGK---EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~--~--~~~~~~~~l~~~la~~~~~---~~~~~~~~gt~a~~~~l~ 71 (359)
.+++||.++ +....+|.+.+++.+....... + ...+...++.+.++++++. +...+++||++|+..+++
T Consensus 40 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~Alk 119 (421)
T PRK06777 40 REYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVK 119 (421)
T ss_pred CEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHH
Confidence 357898876 3345568888888876543221 1 2355667888888888753 456889999999999999
Q ss_pred HhhhhcCC-eEEecC-CCcceeeccccccccCCc-------------cceeeecCCC-CC----CCHHHHHHHhcCCCCC
Q 018240 72 VHCETRGS-EVILGD-NSHIHIYENGGISTIGGV-------------HPRTVKNNQD-GT----MDIDLIEAAIRDPKGE 131 (359)
Q Consensus 72 ~~~~~~g~-~vl~~~-~~~~~~~~~~~~~~~~g~-------------~~~~v~~~~~-~~----~~~~~l~~~l~~~~~~ 131 (359)
.+....|. +|+..+ .+|+.+.. + ....+. .+..++.+.. .. -+++.+++.+++..
T Consensus 120 lAr~~tgr~~ii~~~~~yHG~t~~--~-~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~-- 194 (421)
T PRK06777 120 IARAYTGRPGVIAFGGAFHGRTLL--T-MALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADI-- 194 (421)
T ss_pred HHHHhhCCCeEEEEcCCcCCccHH--H-HhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhcc--
Confidence 88754443 455444 45544332 1 111111 0111221111 10 13566777775210
Q ss_pred ccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEecccc
Q 018240 132 IVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSKG 208 (359)
Q Consensus 132 ~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K~ 208 (359)
+..++++|++++..+ .+|. +++.+++++|.++|++||+++|+||+|.. +...+.. ...+...+|++ +++|.
T Consensus 195 -~~~~iaavi~Epv~~-~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg--~gr~g~~~~~~~~~~~pDiv--~~sK~ 268 (421)
T PRK06777 195 -APDQVAAILLEPIQG-EGGFNVAPPEFMSALRTLCDEHGILLIADEVQTG--FARTGKLFAMEYYDVKPDLI--TMAKS 268 (421)
T ss_pred -CCCceEEEEECCccC-CCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC--CccCCchhhhhhcCCCCCEE--eeehh
Confidence 115688999998876 5675 67889999999999999999999999753 2223321 12222245654 67899
Q ss_pred CCCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC----CCceE
Q 018240 209 LGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL----KGLRV 282 (359)
Q Consensus 209 ~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~----~g~~~ 282 (359)
+++... |++++++++++.+... ..+.++..+++.++++..+++...+ +..++..++.++|++.|+++ |.+..
T Consensus 269 l~~G~pigav~~~~~i~~~~~~~--~~~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~ 346 (421)
T PRK06777 269 LGGGMPISAVVGRAEVMDAPAPG--GLGGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVD 346 (421)
T ss_pred hcCCCceEEEEEcHHHHhccCCC--CCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 974322 7788888888776432 2345555677778888888864332 36667777788888888764 33322
Q ss_pred ecCCccceEEEEEeccc-----hHHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 283 DVDAVETNIVYFEITED-----SKLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 283 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
. ...+.++.+.+..+ ...-...+.+.+.++||.+.+++ .+++|+.++...+++++++++++|++++.
T Consensus 347 v--rg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 347 I--RARGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVHGNVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred e--cCceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 2 23555555544321 01124556667788999998865 36899999889999999999999998864
No 287
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.92 E-value=4.4e-22 Score=177.40 Aligned_cols=336 Identities=15% Similarity=0.107 Sum_probs=221.7
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC--c--cCCChHHHHHHHHHHHHhC--CCCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD--V--LMHDPTAFRLETEMAKVMG--KEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~--~--~~~~~~~~~l~~~la~~~~--~~~~~~~~~gt~a~~~~l~~ 72 (359)
.+++||.++ +....+|++.+++.+...... . ....+...++.+.+++.++ .+...+++||++|+..+++.
T Consensus 44 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~Alkl 123 (429)
T PRK06173 44 RRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKM 123 (429)
T ss_pred CEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHH
Confidence 357898876 444556889888887554321 1 1235667888888888875 34568899999999999998
Q ss_pred hhhh------cC-CeEEecCC-CcceeeccccccccCCc-------------cceeeecCCCC------CCCHHHHHHHh
Q 018240 73 HCET------RG-SEVILGDN-SHIHIYENGGISTIGGV-------------HPRTVKNNQDG------TMDIDLIEAAI 125 (359)
Q Consensus 73 ~~~~------~g-~~vl~~~~-~~~~~~~~~~~~~~~g~-------------~~~~v~~~~~~------~~~~~~l~~~l 125 (359)
+..- ++ .+|+.-.. .|..++. + ....+. .+..++.+... .-+++.+++.+
T Consensus 124 Ar~~~~~~g~~~r~~ii~~~~~yHG~t~~--a-~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i 200 (429)
T PRK06173 124 ALQYQQAKGEVQRTKFATIRSGYHGDTWH--A-MSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLL 200 (429)
T ss_pred HHHHHHHhCCCCCcEEEEECCCcCCcchh--h-hccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHH
Confidence 8742 22 35664444 5544332 1 111110 11122211110 01356677777
Q ss_pred cCCCCCccCCceeEEEEecc-ccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh--HhhhcCccEE
Q 018240 126 RDPKGEIVYPTTRLICLENT-HANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV--RRLVQAADSA 201 (359)
Q Consensus 126 ~~~~~~~~~~~~~~v~i~~~-~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~~d~~ 201 (359)
++.. .++.+|++++. .. .+|.. +|.+++++++++|++||+++|+||+| .| ++..|... ..+...+|++
T Consensus 201 ~~~~-----~~iAAvi~EPi~qg-~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG-~GrtG~~~a~~~~gv~PDiv 272 (429)
T PRK06173 201 EQKG-----DEIAALILEPVVQG-AGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TG-FGRTGKLFALEHAGVVPDIM 272 (429)
T ss_pred HhCC-----CcEEEEEEcchhhc-cCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cC-CCcCCcchHHHhcCCCCCEE
Confidence 6321 57999999986 55 34654 67799999999999999999999998 44 33334332 2222356766
Q ss_pred EEeccccCCCce--eeEEecCHHHHHHHHHHH---HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHh
Q 018240 202 SVCLSKGLGAPV--GSVIVGSKEFIKKARRLR---KTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLN 275 (359)
Q Consensus 202 ~~s~~K~~g~~~--gg~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~ 275 (359)
+ ++|.+++.. .+.++.++++.+.+.... ..++.++..++..++++..+++...+ ..+++..++.++|++.|+
T Consensus 273 ~--~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~ 350 (429)
T PRK06173 273 C--IGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQELA 350 (429)
T ss_pred E--eehhhhCCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 5 679885432 255777888877764211 12445555678888888888876543 356677788888888887
Q ss_pred cCCCceEe-cCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 276 QLKGLRVD-VDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 276 ~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
++.++... .-...+.++.+.+..+ .+...+.+.|.++||.+.+.+ ..+|+.++..++++++++++++|++++.++-
T Consensus 351 ~~~~~~~v~~vRg~Gl~~~iel~~~--~~~~~i~~~l~e~Gi~v~~~g-~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~ 427 (429)
T PRK06173 351 PAAEFDSVAEVRVLGAIGVVEMKEP--VNMATLQPRFVEHGIWVRPFG-KLVYIMPPFIISPDELSQLTSGLLRVLKQEY 427 (429)
T ss_pred HhhcCCCeeeeeccceEEEEEeCCc--ccHHHHHHHHHHCCeEEEecC-CEEEEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 54223211 1124677777777652 246788899999999997765 5999999999999999999999999998753
No 288
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.92 E-value=6.1e-22 Score=177.85 Aligned_cols=339 Identities=16% Similarity=0.160 Sum_probs=214.0
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC----ccCCChHHHHHHHHHHHHhCCC----CeEE-cCCchHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD----VLMHDPTAFRLETEMAKVMGKE----AGLF-VPSGTMGNLIS 69 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~----~~~~~~~~~~l~~~la~~~~~~----~~~~-~~~gt~a~~~~ 69 (359)
.++|||.++ +....+|++.+++.+...... .+..++...++.+.+++.++.. ..++ ++||++|+..+
T Consensus 39 ~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~A 118 (442)
T TIGR00709 39 KEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAA 118 (442)
T ss_pred CEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHH
Confidence 357899887 334556999999887554311 1234567788888898887532 3344 48999999999
Q ss_pred HHHhhhhcC-CeEEecCC-CcceeeccccccccCC-------c-----cceeeecCCCCCC--------CH----HHHHH
Q 018240 70 VLVHCETRG-SEVILGDN-SHIHIYENGGISTIGG-------V-----HPRTVKNNQDGTM--------DI----DLIEA 123 (359)
Q Consensus 70 l~~~~~~~g-~~vl~~~~-~~~~~~~~~~~~~~~g-------~-----~~~~v~~~~~~~~--------~~----~~l~~ 123 (359)
++.+..-.| .+|+.... +|..+.. + ....+ . .+..++.+..... +. +.+++
T Consensus 119 lklAr~~tgr~~Ii~~~~~yHG~t~~--~-~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (442)
T TIGR00709 119 IKLAKTYTGRTNVISFSGGFHGMTIG--A-LAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFEN 195 (442)
T ss_pred HHHHHHhcCCCeEEEEcCCcCCchHH--H-HhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHH
Confidence 998875444 34665444 4444322 1 21111 0 1222222211111 11 12333
Q ss_pred HhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEE
Q 018240 124 AIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSA 201 (359)
Q Consensus 124 ~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~ 201 (359)
.+++... ...++.+|++++..++++..++|.+++++++++|++||+++|.||++..... .+.. ...+...+|++
T Consensus 196 ~~~~~~~--~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGR--tG~~~a~~~~gv~PDiv 271 (442)
T TIGR00709 196 FIEDVES--GVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGR--SGTMFAFEHAGIEPDFV 271 (442)
T ss_pred HHHhhcc--CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCC--CCchhHHHHcCCCCcEE
Confidence 4431110 1146889999999987766678999999999999999999999999753222 2321 22232356766
Q ss_pred EEeccccCCC--ceeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC-
Q 018240 202 SVCLSKGLGA--PVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL- 277 (359)
Q Consensus 202 ~~s~~K~~g~--~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~- 277 (359)
+ ++|.+++ |. |+++.++++ +.+. ....+.++..+++.++++..+++...+ +..++..++.++|.+.|+++
T Consensus 272 ~--~gK~l~~G~Pi-gav~~~~~~-~~~~--~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~ 345 (442)
T TIGR00709 272 V--MSKAVGGGLPL-AVLLIAPEF-DAWQ--PAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMI 345 (442)
T ss_pred E--EcccccCCccc-EEEEEchHH-hccC--CCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 6 5688754 34 445566663 4432 123456666778888888888876443 35566777788888887763
Q ss_pred ---CCceEecCCccceEEEEEeccch------------HHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHH
Q 018240 278 ---KGLRVDVDAVETNIVYFEITEDS------------KLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVH 340 (359)
Q Consensus 278 ---~g~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~ 340 (359)
|.+. .. ...+.++.+.+..+. ......+...+.++|+.+.+.+ .+.+|+.++..+++++++
T Consensus 346 ~~~~~v~-~v-rG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~ei~ 423 (442)
T TIGR00709 346 KEHPCIG-NV-RGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCPITIDQEECE 423 (442)
T ss_pred HhCCCee-ee-eccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCCCCHHHHH
Confidence 2221 11 345666666664310 1124567788889999986643 578999999999999999
Q ss_pred HHHHHHHHHHHHHHhh
Q 018240 341 YTLSCFQKIYAGVCEE 356 (359)
Q Consensus 341 ~~~~~l~~~~~~~~~~ 356 (359)
+++++++++++++.++
T Consensus 424 ~~~~~l~~~l~~~~~~ 439 (442)
T TIGR00709 424 EGISRFKQAVEEALAE 439 (442)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999887554
No 289
>PRK06541 hypothetical protein; Provisional
Probab=99.92 E-value=7.5e-22 Score=177.46 Aligned_cols=340 Identities=18% Similarity=0.134 Sum_probs=217.0
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCc----cCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDV----LMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~ 72 (359)
.++|||.++ +....+|.+.+++.+....... ...++...++.+.+++.++. +.+.+++||++|+..+++.
T Consensus 52 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~Alkl 131 (460)
T PRK06541 52 KRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKL 131 (460)
T ss_pred CEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHH
Confidence 357899886 4445569999888876543211 12356667888888888753 4568899999999999998
Q ss_pred hhhh---c----CCeEEec-CCCcceeeccccccccCCc------------cceeeecCCCC-----CCC--------HH
Q 018240 73 HCET---R----GSEVILG-DNSHIHIYENGGISTIGGV------------HPRTVKNNQDG-----TMD--------ID 119 (359)
Q Consensus 73 ~~~~---~----g~~vl~~-~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~-----~~~--------~~ 119 (359)
+... . ..+|+.- ..+|+.+.. + ....+. .+..++.+... .-+ ++
T Consensus 132 Ar~~~~~~g~~~r~~ii~~~~~yHG~t~~--a-~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (460)
T PRK06541 132 AKQYFKLTGKPGKHKVISRAIAYHGTTQG--A-LAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAAD 208 (460)
T ss_pred HHHHHHhcCCCCccEEEEEcCcccCcchh--h-hcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHH
Confidence 8642 1 2456644 445544432 1 111111 11222211111 012 35
Q ss_pred HHHHHhcCCCCCccCCceeEEEEeccccCCCceec-ChhhHHHHHHHHHHcCcEEEEeccc-ccchhhhcCchhHhhhcC
Q 018240 120 LIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGAR-IFNAAVALGVPVRRLVQA 197 (359)
Q Consensus 120 ~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~-~~~~~~~~~~~~~~~~~~ 197 (359)
.+++.+++. +..++.+|++++..+ ++|... |.+++++|+++|++||+++|+||+| ++|-.+.. .....+...
T Consensus 209 ~l~~~l~~~----~~~~~Aavi~EPv~g-~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~-~a~~~~gv~ 282 (460)
T PRK06541 209 RIEEAIEFE----GPDTVAAVFLEPVQN-AGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEM-FGCERFGYV 282 (460)
T ss_pred HHHHHHHhc----CCCCEEEEEECCccC-CCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchh-hhhhhcCCC
Confidence 677777531 114688899988776 677765 4799999999999999999999998 44432211 111112224
Q ss_pred ccEEEEeccccCCC---ceeeEEecCHHHHHHHHHHH-H-hhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHH
Q 018240 198 ADSASVCLSKGLGA---PVGSVIVGSKEFIKKARRLR-K-TLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLA 271 (359)
Q Consensus 198 ~d~~~~s~~K~~g~---~~gg~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~ 271 (359)
+|++ +++|.+++ |.|+ +++++++++.+.... . ..++++..++..++++...++...+ ...++..++.++|.
T Consensus 283 PDiv--t~gK~l~~G~~piga-v~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~ 359 (460)
T PRK06541 283 PDII--TCAKGITSGYSPLGA-MIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFEREGLLDHVRDNEPAFR 359 (460)
T ss_pred CCEE--EecccccCCccceeE-EEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 6765 57798874 4444 666777777764321 1 2345666777888888888876433 36677888888999
Q ss_pred HHHhcCCCceEe-cCCccceEEEEEeccch--------H----HHHHHHHHHHHhcCceeccC--CCcEEEEEeCCCCCH
Q 018240 272 EGLNQLKGLRVD-VDAVETNIVYFEITEDS--------K----LYAACLLKKLEEHGVLVMPE--SSTRVRIVVHHQISA 336 (359)
Q Consensus 272 ~~l~~~~g~~~~-~~~~~~~~~~~~~~~~~--------~----~~~~~~~~~l~~~gi~~~~~--~~~~lRi~~~~~~~~ 336 (359)
+.|+++....+. .-...+.++.+.+..+. . .....+.+.|.++||.+.+. +...+|++++..+++
T Consensus 360 ~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~g~~~lrl~Ppl~~t~ 439 (460)
T PRK06541 360 ATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADDRGDPVVQLAPPLISGQ 439 (460)
T ss_pred HHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecCCCCCEEEEECCCCCCH
Confidence 888876222211 11235666666653210 0 01135677888999999763 457899999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 018240 337 NDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 337 ~~i~~~~~~l~~~~~~~~ 354 (359)
+|+++++++|+++++++.
T Consensus 440 ~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 440 EEFDEIEQILRSVLTEAW 457 (460)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998754
No 290
>PRK07678 aminotransferase; Validated
Probab=99.92 E-value=8.5e-22 Score=177.05 Aligned_cols=338 Identities=18% Similarity=0.163 Sum_probs=213.5
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCc---cCCChHHHHHHHHHHHHhCCC-CeEEcCCchHHHHHHHHHhh
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDV---LMHDPTAFRLETEMAKVMGKE-AGLFVPSGTMGNLISVLVHC 74 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~l~~~la~~~~~~-~~~~~~~gt~a~~~~l~~~~ 74 (359)
.++|||.++ +....+|++.+++.+....... ....+...++.+.++++++.. ...+++||++|+..+++.+.
T Consensus 47 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr 126 (451)
T PRK07678 47 NRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPLTQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIAR 126 (451)
T ss_pred CEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccccccCCHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHH
Confidence 357899876 3445558998888775543221 123566678888999988654 45788999999999999886
Q ss_pred hh------cC-CeEEecCC-CcceeeccccccccCCc------------cceeeecCCCCCC---------C---HHHHH
Q 018240 75 ET------RG-SEVILGDN-SHIHIYENGGISTIGGV------------HPRTVKNNQDGTM---------D---IDLIE 122 (359)
Q Consensus 75 ~~------~g-~~vl~~~~-~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~~---------~---~~~l~ 122 (359)
.- ++ .+|+.... +|..+.. + ....+. .+..++.+..... + ++.++
T Consensus 127 ~~t~~~g~~~r~~ii~~~~~yHG~t~~--a-ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 203 (451)
T PRK07678 127 QYHAQKGEPHRYKFISRYRAYHGNSMG--A-LAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEID 203 (451)
T ss_pred HHHHhcCCCCCcEEEEECCCcCCccHH--H-hhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHH
Confidence 42 12 45665444 4444322 1 111110 1122222111110 1 22355
Q ss_pred HHhcCCCCCccCCceeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccc-cchhhhcCchhHhhhcCccE
Q 018240 123 AAIRDPKGEIVYPTTRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARI-FNAAVALGVPVRRLVQAADS 200 (359)
Q Consensus 123 ~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~-~~~~~~~~~~~~~~~~~~d~ 200 (359)
+.++.. +.+++.+|++++...+ .|.. .+.+++++++++|++||+++|+||++. +|-.+.. .....+.-.+|+
T Consensus 204 ~~~~~~----~~~~iAAvi~EPiqg~-gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~-~~~~~~gv~PDi 277 (451)
T PRK07678 204 RVMTWE----LSETIAAVIMEPIITG-GGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKA-FGFMNYGVKPDI 277 (451)
T ss_pred HHHHhc----CCCceEEEEEccccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchh-HHHHhcCCCCCE
Confidence 566421 1157999999998875 4554 667999999999999999999999974 3222210 011122235676
Q ss_pred EEEeccccCCC---ceeeEEecCHHHHHHHHHHH----HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHH
Q 018240 201 ASVCLSKGLGA---PVGSVIVGSKEFIKKARRLR----KTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAE 272 (359)
Q Consensus 201 ~~~s~~K~~g~---~~gg~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~ 272 (359)
+ +++|.+|+ |. |.+++++++.+.+.... ...++|+..++..++++...++...+ ...++..++.++|++
T Consensus 278 v--t~gK~lggG~~Pi-~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~ 354 (451)
T PRK07678 278 I--TMAKGITSAYLPL-SATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERSAQLGELLLE 354 (451)
T ss_pred E--EeecccccCCcce-eEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 6 44688864 33 55777888887764211 13566777788888998888876544 245566666677777
Q ss_pred HHhcC-C--CceEecCCccceEEEEEeccc-------hHHHHHHHHHHHHhcCceeccC------CCcEEEEEeCCCCCH
Q 018240 273 GLNQL-K--GLRVDVDAVETNIVYFEITED-------SKLYAACLLKKLEEHGVLVMPE------SSTRVRIVVHHQISA 336 (359)
Q Consensus 273 ~l~~~-~--g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~gi~~~~~------~~~~lRi~~~~~~~~ 336 (359)
.|+++ . ++.... ...+.++.+.+..+ +......+.+.|.++||.+.+. +...+|++++..+++
T Consensus 355 ~l~~~~~~~~~v~~v-rg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~ 433 (451)
T PRK07678 355 QLKEELGEHPLVGDI-RGKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISS 433 (451)
T ss_pred HHHHHHhcCCCEEEE-EeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECCCcCCH
Confidence 66542 1 221111 23566666666321 1123567888899999998653 247899999989999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 018240 337 NDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 337 ~~i~~~~~~l~~~~~~~ 353 (359)
+|++++++++.++++++
T Consensus 434 ~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 434 EEIAFIVGTLKTALERI 450 (451)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999998765
No 291
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.92 E-value=3.3e-22 Score=177.91 Aligned_cols=333 Identities=17% Similarity=0.127 Sum_probs=217.7
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC--c--cCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD--V--LMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~--~--~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~ 72 (359)
.+++||.++ +...-+|++.+++.+...... . ....+...++.+.+++.++. +...+++||++|+..+++.
T Consensus 43 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~Alkl 122 (428)
T PRK07986 43 RRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKM 122 (428)
T ss_pred CEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHH
Confidence 357899886 344555899988887654321 1 12456678888888888754 4568899999999999998
Q ss_pred hhhh------cCCeEEecCC-CcceeeccccccccCCc-------------cceeeecCCCC------CCCHHHHHHHhc
Q 018240 73 HCET------RGSEVILGDN-SHIHIYENGGISTIGGV-------------HPRTVKNNQDG------TMDIDLIEAAIR 126 (359)
Q Consensus 73 ~~~~------~g~~vl~~~~-~~~~~~~~~~~~~~~g~-------------~~~~v~~~~~~------~~~~~~l~~~l~ 126 (359)
+..- ...+|+.-.. +|+.+.. + ....+- .+..++..... .-|++++++.++
T Consensus 123 Ar~~~~~~g~~r~kii~~~~~yHG~t~~--a-~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~ 199 (428)
T PRK07986 123 ALQYWQAKGEPRQRFLTLRHGYHGDTFG--A-MSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMA 199 (428)
T ss_pred HHHHHHhcCCCCcEEEEECCCcCCCcHh--h-hcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHH
Confidence 8741 2345665554 4443322 1 111110 11122211110 115677888886
Q ss_pred CCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh--HhhhcCccEEEE
Q 018240 127 DPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV--RRLVQAADSASV 203 (359)
Q Consensus 127 ~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~~d~~~~ 203 (359)
+.. .++.+|++++.....+|+ .++.+++++|+++|++||+++|+||+|. |. +..|... ..+.-.+|++
T Consensus 200 ~~~-----~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~t-G~-GrtG~~fa~~~~gv~PDi~-- 270 (428)
T PRK07986 200 AHR-----HEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIAT-GF-GRTGKLFACEHAGIAPDIL-- 270 (428)
T ss_pred hCC-----CcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-CC-ccCCCeeeecccCCCCCEE--
Confidence 321 468899998863324565 4566999999999999999999999983 32 3333221 1222256766
Q ss_pred eccccCCCc-ee-eEEecCHHHHHHHHHHH---HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC
Q 018240 204 CLSKGLGAP-VG-SVIVGSKEFIKKARRLR---KTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL 277 (359)
Q Consensus 204 s~~K~~g~~-~g-g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~ 277 (359)
+++|.+++. .. +.+++++++.+.+.... ...+.++..+++.++++...++...+ +.+++..++.++|++.|+++
T Consensus 271 t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l 350 (428)
T PRK07986 271 CLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAPL 350 (428)
T ss_pred EechhhhCCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 467988543 12 55677888888875321 12455666678888888888875543 35667777788888888765
Q ss_pred ---CCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 278 ---KGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 278 ---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
|.+.-. ...+.++.+.+..+ .....+.+.|.++|+.+.+.+ ..+|+.++..++++++++++++|.+++++
T Consensus 351 ~~~~~i~~v--Rg~Gl~~~ve~~~~--~~~~~~~~~l~~~Gl~~~~~g-~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 351 RDAPMVADV--RVLGAIGVVETTRP--VNMAALQRFFVEQGVWIRPFG-KLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred hcCCCEEeE--eccceEEEEEeCCc--ccHHHHHHHHHHCCcEEEecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 222211 33566666777542 245688899999999997765 68999999999999999999999998854
No 292
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.92 E-value=9.2e-22 Score=176.16 Aligned_cols=338 Identities=15% Similarity=0.170 Sum_probs=211.6
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCC-Cc---cCCChHHHHHHHHHHHHhC----CC-CeEEc-CCchHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDD-DV---LMHDPTAFRLETEMAKVMG----KE-AGLFV-PSGTMGNLI 68 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~-~~---~~~~~~~~~l~~~la~~~~----~~-~~~~~-~~gt~a~~~ 68 (359)
.++|||.++ +....+|.+.+++.+..... .. ....+...++.+.+++.+. .+ ...++ +||++|+..
T Consensus 39 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~ 118 (425)
T PRK09264 39 KEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEA 118 (425)
T ss_pred CEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHH
Confidence 367899887 33455599999997754421 11 1234556777788887652 22 23454 799999999
Q ss_pred HHHHhhhhcCC-eEEecC-CCcceeeccccccc------c--CC---ccceeeecCCCC--C-CCHHHHHHHhcCCCCCc
Q 018240 69 SVLVHCETRGS-EVILGD-NSHIHIYENGGIST------I--GG---VHPRTVKNNQDG--T-MDIDLIEAAIRDPKGEI 132 (359)
Q Consensus 69 ~l~~~~~~~g~-~vl~~~-~~~~~~~~~~~~~~------~--~g---~~~~~v~~~~~~--~-~~~~~l~~~l~~~~~~~ 132 (359)
+++.+..-+|. +|+... .+|+.+.. ++.. . .+ ..+..++.+... . -|++++++.+++....
T Consensus 119 AlklAr~~tgr~~ii~~~~~yHG~t~~--~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~- 195 (425)
T PRK09264 119 ALKLARKVTGRTNIVAFTNGFHGMTLG--SLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSG- 195 (425)
T ss_pred HHHHHHHhcCCCeEEEECCccCCccHH--HHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCC-
Confidence 99998754443 455444 45544332 1110 0 01 022333332111 0 2677888888643111
Q ss_pred cCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh--HhhhcCccEEEEeccccC
Q 018240 133 VYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV--RRLVQAADSASVCLSKGL 209 (359)
Q Consensus 133 ~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~~d~~~~s~~K~~ 209 (359)
.+++.+|++++..++ +|. +++.+++++|+++|++||+++|+||+|.. ++..|... ......+|++ +++|.+
T Consensus 196 -~~~~aavi~Epv~g~-~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG--~GrtG~~~~~~~~~v~PDi~--t~~K~l 269 (425)
T PRK09264 196 -VDLPAAVIVETVQGE-GGINVASAEWLQRLAKLCRKHDILLIVDDIQAG--CGRTGTFFSFERAGITPDIV--TLSKSI 269 (425)
T ss_pred -CCceEEEEEecccCC-CCCcCCCHHHHHHHHHHHHHcCcEEEEechhhC--CccccHHHHHhhcCCCCCEE--Eecccc
Confidence 136889999998884 565 56789999999999999999999999853 22223221 1122256755 556988
Q ss_pred CC-cee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH-H-HHhhhHHHHHHHHHHHHhcC----CCce
Q 018240 210 GA-PVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENV-L-VMLDGDHKKAKLLAEGLNQL----KGLR 281 (359)
Q Consensus 210 g~-~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~l~~~l~~~----~g~~ 281 (359)
+. ... |+++.++++ ..+. ....+.++..++...+++..+++... + +..++..++.++|++.|+++ |.+.
T Consensus 270 ~~~G~pigav~~~~~i-~~~~--~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~ 346 (425)
T PRK09264 270 SGYGLPMALVLIKPEL-DVWK--PGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERLEEIAAKYPGLG 346 (425)
T ss_pred CCCccceEEEEEchhh-hccC--CCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhCCCce
Confidence 64 221 666777665 3322 11234444445555666666663322 2 35566667777777776653 2221
Q ss_pred EecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 282 VDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
. ..+..+.++++.+... .....+.+.+.++||.+.+.+ ...||++++..++++++++++++|+++++++.+
T Consensus 347 ~-~vrg~Gl~~~i~l~~~--~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~~ 419 (425)
T PRK09264 347 A-EVRGRGMMQGIDFGDG--ELAGKIAAEAFENGLIIETSGPEDEVVKLLPPLTIDEEELEEGLDILEEAVAEVLA 419 (425)
T ss_pred e-cceecccEEEEEecCh--HHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1 1234677778888652 356788999999999997654 468999998889999999999999999988754
No 293
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.92 E-value=7.3e-22 Score=175.77 Aligned_cols=329 Identities=14% Similarity=0.123 Sum_probs=214.3
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC--cc--CCChHHHHHHHHHHHHhC--CCCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD--VL--MHDPTAFRLETEMAKVMG--KEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~--~~--~~~~~~~~l~~~la~~~~--~~~~~~~~~gt~a~~~~l~~ 72 (359)
.+++||.++ +....+|++.+++.+...... .+ ..++...++.+.+++..+ .+...+++||++|+..|++.
T Consensus 40 ~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~Alkl 119 (422)
T PRK05630 40 STVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKM 119 (422)
T ss_pred CEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHH
Confidence 357899876 445556899988887654321 11 235667788888988874 34678999999999999998
Q ss_pred hhhh------c-CCeEEecCC-CcceeeccccccccCCc-------------cceeeecCCCCCCC-------HHHHHHH
Q 018240 73 HCET------R-GSEVILGDN-SHIHIYENGGISTIGGV-------------HPRTVKNNQDGTMD-------IDLIEAA 124 (359)
Q Consensus 73 ~~~~------~-g~~vl~~~~-~~~~~~~~~~~~~~~g~-------------~~~~v~~~~~~~~~-------~~~l~~~ 124 (359)
+..- + ..+|+.-.. +|..+.. + ....+- ....++.+.....+ .+.+++.
T Consensus 120 Ar~~~~~~g~~~r~~ii~~~~~yHG~t~~--a-ls~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 196 (422)
T PRK05630 120 ALQYSKGQGHPERTRLLTWRSGYHGDTFA--A-MSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELL 196 (422)
T ss_pred HHHHHHhcCCCCCcEEEEECCCcCCccHH--H-hccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHH
Confidence 7642 1 235665554 4443322 1 111110 11222222111111 2334444
Q ss_pred hcCCCCCccCCceeEEEEecc-ccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH--hhhcCccE
Q 018240 125 IRDPKGEIVYPTTRLICLENT-HANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR--RLVQAADS 200 (359)
Q Consensus 125 l~~~~~~~~~~~~~~v~i~~~-~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~~d~ 200 (359)
++ .++.+|++++. .. .+|+ ..+.+++++++++|++||+++|+||++... +..|.... .....+|+
T Consensus 197 ~~--------~~iAAvi~EPi~qg-~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~--GrtG~~~a~~~~gv~PDi 265 (422)
T PRK05630 197 ID--------ETVAAIIIEPIVQG-AGGMRFHDVALIEGVRTLCDKHDILLIADEIATGF--GRTGELFATLAAGVTPDI 265 (422)
T ss_pred Hh--------hceEEEEEechhcC-cCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCC--CcCchhhHHHhcCCCCCe
Confidence 44 57999999985 55 4566 456799999999999999999999997422 22333211 22235666
Q ss_pred EEEeccccCCC--ceeeEEecCHHHHHHHHHH----HHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHH
Q 018240 201 ASVCLSKGLGA--PVGSVIVGSKEFIKKARRL----RKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEG 273 (359)
Q Consensus 201 ~~~s~~K~~g~--~~gg~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~ 273 (359)
+ +++|.+++ +..|++++++++.+.+... ...++.++..++..++++..+++...+ ..+++..++.++|++.
T Consensus 266 ~--t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~~g~~l~~~ 343 (422)
T PRK05630 266 M--CVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRIEAELIAG 343 (422)
T ss_pred e--eeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 6 66798844 2346677888888876421 112456666778888888888865543 2445666777777777
Q ss_pred HhcC---CCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 274 LNQL---KGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 274 l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
|+++ |.+.-. ...+.++.+.+..+ ..+..+.+.+.++|+.+.+.+ +.+|+.++..++++++++++++|++++
T Consensus 344 L~~l~~~~~v~~v--Rg~Gl~~~ie~~~~--~~~~~~~~~~~~~Gl~~~~~g-~~l~~~PpL~it~~~i~~~~~~l~~al 418 (422)
T PRK05630 344 LSPLAHLPGVADV--RVLGAIGVVEMEQP--VDMEEATQAAVDHGVWLRPFG-RLVYVMPPYITTSEQIAQICAALAAAV 418 (422)
T ss_pred HHHhhcCCCeeee--eccccEEEEEECCc--ccHHHHHHHHHHCCeEEEecC-CEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 7653 322211 34677777777642 235678888999999997765 789999999999999999999999988
Q ss_pred HH
Q 018240 351 AG 352 (359)
Q Consensus 351 ~~ 352 (359)
+.
T Consensus 419 ~~ 420 (422)
T PRK05630 419 KA 420 (422)
T ss_pred hc
Confidence 64
No 294
>PRK07482 hypothetical protein; Provisional
Probab=99.92 E-value=1.1e-21 Score=176.70 Aligned_cols=340 Identities=13% Similarity=0.038 Sum_probs=216.8
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCc---c--CCChHHHHHHHHHHHHhC--CCCeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDV---L--MHDPTAFRLETEMAKVMG--KEAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~---~--~~~~~~~~l~~~la~~~~--~~~~~~~~~gt~a~~~~l~ 71 (359)
.++|||.++ +....+|++.+++.+....... + ..++...++.+.+++.++ .+.+.+++||++|+..+++
T Consensus 50 ~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlK 129 (461)
T PRK07482 50 RRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIK 129 (461)
T ss_pred CEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHH
Confidence 367999987 3345568999998876543221 1 235667888888888874 3456899999999999999
Q ss_pred Hhhhh------c-CCeEEecC-CCcceeeccccccccCCc------------cceeeecCCCCC-------------CCH
Q 018240 72 VHCET------R-GSEVILGD-NSHIHIYENGGISTIGGV------------HPRTVKNNQDGT-------------MDI 118 (359)
Q Consensus 72 ~~~~~------~-g~~vl~~~-~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~-------------~~~ 118 (359)
.+... + ..+|+... .+|+.+.- + ....+. .+..++.+.... -++
T Consensus 130 lAr~~~~~~g~~~r~~Ii~~~~~YHG~t~g--a-~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 206 (461)
T PRK07482 130 LVWYYNNVLGRPEKKKIISRWRGYHGSGVV--T-GSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCA 206 (461)
T ss_pred HHHHHHHhcCCCCCceEEEecCccCCccHh--h-hhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHH
Confidence 98631 1 23566544 45443321 1 111110 111121111000 035
Q ss_pred HHHHHHhcCCCCCccCCceeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcC
Q 018240 119 DLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQA 197 (359)
Q Consensus 119 ~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 197 (359)
+.+++.+.+. +.+++.+|++++...+ .|+. .+.+++++|+++|++||+++|+||++..............+.-.
T Consensus 207 ~~l~~~~~~~----~~~~iAAvi~EPvqg~-gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~ 281 (461)
T PRK07482 207 DELEELILAE----GPDTIAAFIAEPVLGT-GGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIE 281 (461)
T ss_pred HHHHHHHHhc----CCCcEEEEEECCccCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCC
Confidence 6677777421 1146899999998875 4565 66799999999999999999999997533222111111222235
Q ss_pred ccEEEEeccccCCC---ceeeEEecCHHHHHHHHHH-----HHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHH
Q 018240 198 ADSASVCLSKGLGA---PVGSVIVGSKEFIKKARRL-----RKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAK 268 (359)
Q Consensus 198 ~d~~~~s~~K~~g~---~~gg~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~ 268 (359)
+|++++ +|.+++ |.++ +++++++.+.+... ....++++..+++.++++...++...+ ...++..++.+
T Consensus 282 PDiv~~--gKgl~gG~~Pi~a-v~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~ 358 (461)
T PRK07482 282 PDLITV--AKGLTSAYAPLSG-SIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENLVGNAAEVGA 358 (461)
T ss_pred CCEEEE--ccccccCccccce-eeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 677755 588854 4444 56677777765421 113556677788888888888876544 34566667777
Q ss_pred HHHHHHhc----CCCceEecCCccceEEEEEeccch--------H-HHHHHHHHHHHhcCceeccC-CCcEEEEEeCCCC
Q 018240 269 LLAEGLNQ----LKGLRVDVDAVETNIVYFEITEDS--------K-LYAACLLKKLEEHGVLVMPE-SSTRVRIVVHHQI 334 (359)
Q Consensus 269 ~l~~~l~~----~~g~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~~l~~~gi~~~~~-~~~~lRi~~~~~~ 334 (359)
+|.+.|++ .|.+. .. ...+.++.+.+..+. . .....+...|.++|+.+.+. ..+.+|+.++..+
T Consensus 359 ~l~~~L~~l~~~~~~v~-~v-rG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~~~~~i~~~Ppl~i 436 (461)
T PRK07482 359 YFRARLRAAFGDHPLVG-EV-RGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMPHGDILGFAPPLVL 436 (461)
T ss_pred HHHHHHHHHHhcCCCEE-EE-eeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCCCCCEEEEeCCCCC
Confidence 77777764 32221 11 345666666664210 0 12457888889999998543 3578999998899
Q ss_pred CHHHHHHHHHHHHHHHHHHHh
Q 018240 335 SANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 335 ~~~~i~~~~~~l~~~~~~~~~ 355 (359)
+++|+++++++++++++++.+
T Consensus 437 t~~ei~~~~~~l~~~l~~~~~ 457 (461)
T PRK07482 437 TRAEADEIVAIAKDAVDEVLG 457 (461)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988754
No 295
>PRK05965 hypothetical protein; Provisional
Probab=99.92 E-value=1.4e-21 Score=175.87 Aligned_cols=344 Identities=14% Similarity=0.076 Sum_probs=218.8
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC----cc-CCChHHHHHHHHHHHHhC--CCCeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD----VL-MHDPTAFRLETEMAKVMG--KEAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~----~~-~~~~~~~~l~~~la~~~~--~~~~~~~~~gt~a~~~~l~ 71 (359)
.++|||.++ +....+|++.+++.+...... .+ ..++...++.+.+++.+. .+.+++++||++|+..|++
T Consensus 46 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlK 125 (459)
T PRK05965 46 HQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVR 125 (459)
T ss_pred CEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHH
Confidence 367999886 444556899998887654321 11 125666788888988874 3456788999999999999
Q ss_pred Hhhhh------c-CCeEEecC-CCcceeecccccc------ccCC---ccceeeecCC--CC--CCC--------HHHHH
Q 018240 72 VHCET------R-GSEVILGD-NSHIHIYENGGIS------TIGG---VHPRTVKNNQ--DG--TMD--------IDLIE 122 (359)
Q Consensus 72 ~~~~~------~-g~~vl~~~-~~~~~~~~~~~~~------~~~g---~~~~~v~~~~--~~--~~~--------~~~l~ 122 (359)
.++.- + ..+|+.-. .+|+.+....... ...+ ..+..++.+. .. .-| ++.++
T Consensus 126 lAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 205 (459)
T PRK05965 126 FIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALR 205 (459)
T ss_pred HHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHH
Confidence 87642 2 23566444 4454432100000 0011 0112222111 10 112 25677
Q ss_pred HHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEE
Q 018240 123 AAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSA 201 (359)
Q Consensus 123 ~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~ 201 (359)
+.+++.. .+++.+|++++...+ +|. +.|.+++++++++|++||+++|+||++..............+...+|++
T Consensus 206 ~~i~~~~----~~~iAAvIvEPiqg~-gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv 280 (459)
T PRK05965 206 AKVAELG----ADNVAAFFCEPIQGS-GGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLM 280 (459)
T ss_pred HHHHhcC----CCceEEEEEeccccC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeE
Confidence 7776321 147899999998874 455 5677999999999999999999999975332221111122222356766
Q ss_pred EEeccccCCC---ceeeEEecCHHHHHHHHHH-----HHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHH
Q 018240 202 SVCLSKGLGA---PVGSVIVGSKEFIKKARRL-----RKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAE 272 (359)
Q Consensus 202 ~~s~~K~~g~---~~gg~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~ 272 (359)
++ +|.+++ |. |.+++++++.+.+..- ....++++..+++.++++...++...+ +..++..++.++|.+
T Consensus 281 ~~--gKgl~gG~~Pi-~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~ 357 (459)
T PRK05965 281 TV--AKGLTSGYVPM-GAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAA 357 (459)
T ss_pred Ee--chhhccCCcce-eEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 55 587754 34 4466788888776421 113566777788888888888876644 355677778888888
Q ss_pred HHhcCCCce-EecCCccceEEEEEeccch---------HHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHH
Q 018240 273 GLNQLKGLR-VDVDAVETNIVYFEITEDS---------KLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYT 342 (359)
Q Consensus 273 ~l~~~~g~~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~ 342 (359)
.|+++.... +..-...+.++.+.+..+. ......+.+.+.++|+.+.+.+...+|+.++..+++++++++
T Consensus 358 ~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g~~~i~~~PpL~it~~ei~~~ 437 (459)
T PRK05965 358 GLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAFGDGVLGFAPALCCTEGEFDLI 437 (459)
T ss_pred HHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEecCCcEEEEECCCcCCHHHHHHH
Confidence 887752111 1111345666566553210 012457888889999999877777899999999999999999
Q ss_pred HHHHHHHHHHHH
Q 018240 343 LSCFQKIYAGVC 354 (359)
Q Consensus 343 ~~~l~~~~~~~~ 354 (359)
+++|.++++++.
T Consensus 438 ~~~l~~~l~~~~ 449 (459)
T PRK05965 438 FERTRKTLDDVL 449 (459)
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
No 296
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.92 E-value=1.1e-21 Score=176.89 Aligned_cols=342 Identities=17% Similarity=0.200 Sum_probs=209.3
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCc----cCCChHHHHHHHHHHHHhCC---CCeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDV----LMHDPTAFRLETEMAKVMGK---EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~l~~~la~~~~~---~~~~~~~~gt~a~~~~l~ 71 (359)
.++|||.++ +...-+|.+.+++.+....... ...++...++.+.++++++. +...+++||++|+..+++
T Consensus 54 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~Alk 133 (451)
T PRK06918 54 NQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVK 133 (451)
T ss_pred CEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHH
Confidence 357899887 3344558999888875543221 12356778888899998863 356899999999999999
Q ss_pred HhhhhcCC-eEEecC-CCcceeeccccccccCCc-------------cceeeecCCCC----CCC--------HHHHHHH
Q 018240 72 VHCETRGS-EVILGD-NSHIHIYENGGISTIGGV-------------HPRTVKNNQDG----TMD--------IDLIEAA 124 (359)
Q Consensus 72 ~~~~~~g~-~vl~~~-~~~~~~~~~~~~~~~~g~-------------~~~~v~~~~~~----~~~--------~~~l~~~ 124 (359)
.+..-.|. +|+.-. .+|+.+.. + ....+. .+..++.+... .+. .+.+++.
T Consensus 134 lAr~~tgr~~ii~~~~~yHG~t~~--~-ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (451)
T PRK06918 134 IARKYTKRQGIISFSRGFHGRTLM--T-MTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNF 210 (451)
T ss_pred HHHHHhCCCcEEEECCCcCccchh--h-hhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHH
Confidence 88753433 455444 44444332 1 111110 11222221100 010 1234433
Q ss_pred hcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEE
Q 018240 125 IRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASV 203 (359)
Q Consensus 125 l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~ 203 (359)
+.+. ....++.+|++++...+ +|. ..+.+++++|+++|++||+++|+||++..............+...+|+ .
T Consensus 211 ~~~~---~~~~~iAavi~EPi~g~-gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi--~ 284 (451)
T PRK06918 211 FISE---VAPETIAAVVMEPVQGE-GGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDL--I 284 (451)
T ss_pred HHhh---cCCCceEEEEECcccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCE--E
Confidence 3210 01157899999988774 466 455677999999999999999999997433222111122222223564 4
Q ss_pred eccccCCCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC----
Q 018240 204 CLSKGLGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL---- 277 (359)
Q Consensus 204 s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~---- 277 (359)
+++|.++.+.. |++++++++.+.+... ..+.++..+++.++++...++...+ ...++..++.+++.+.|+++
T Consensus 285 t~sK~l~~G~pig~v~~~~~i~~~~~~~--~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~ 362 (451)
T PRK06918 285 TVSKSLGAGVPISGVIGRKEIMDESAPG--ELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKY 362 (451)
T ss_pred eeehhhcCCCccEEEEEcHHHHhccCCC--CcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhC
Confidence 78899974333 7788888888776422 2345555667777777776654322 23344555556666666543
Q ss_pred CCceEecCCccceEEEEEec-c-----chHHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 278 KGLRVDVDAVETNIVYFEIT-E-----DSKLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 278 ~g~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
+.+.-. .+ .+.++.+.+. + +.......+.+.+.++||.+.+++ ...+|++++..++++++++++++|.++
T Consensus 363 ~~~~~v-rg-~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~~~~lrl~p~l~~t~~~id~~l~~l~~~ 440 (451)
T PRK06918 363 NCIGDV-RG-LGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEES 440 (451)
T ss_pred CCceee-cc-ceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHH
Confidence 222212 22 3444443332 1 122346778888899999998865 378999998779999999999999999
Q ss_pred HHHHHhhc
Q 018240 350 YAGVCEEN 357 (359)
Q Consensus 350 ~~~~~~~~ 357 (359)
++++.++.
T Consensus 441 l~~~~~~~ 448 (451)
T PRK06918 441 LQACYEKA 448 (451)
T ss_pred HHHHHHhh
Confidence 99876543
No 297
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.92 E-value=1.4e-21 Score=174.98 Aligned_cols=334 Identities=14% Similarity=0.145 Sum_probs=208.8
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCc----cCCChHHHHHHHHHHHHhCC---CCeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDV----LMHDPTAFRLETEMAKVMGK---EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~l~~~la~~~~~---~~~~~~~~gt~a~~~~l~ 71 (359)
.++|||.++ +....+|++.+++.+....... +...+...++.+.+++.++. +...+++||++|+..+++
T Consensus 33 ~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~Alk 112 (420)
T TIGR00700 33 NRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVK 112 (420)
T ss_pred CEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHH
Confidence 357899887 3445568999888876543221 12345567788888888752 456899999999999999
Q ss_pred HhhhhcCC-eEE-ecCCCcceeeccccccccCC--------c-----cceeeecCCCCC-------C----CHHHHHHHh
Q 018240 72 VHCETRGS-EVI-LGDNSHIHIYENGGISTIGG--------V-----HPRTVKNNQDGT-------M----DIDLIEAAI 125 (359)
Q Consensus 72 ~~~~~~g~-~vl-~~~~~~~~~~~~~~~~~~~g--------~-----~~~~v~~~~~~~-------~----~~~~l~~~l 125 (359)
.+....|. +|+ +....|+.+.. ++ ...+ . .+..++.+.... . +++.+++.+
T Consensus 113 lAr~~tgr~~ii~~~~~yHG~t~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (420)
T TIGR00700 113 IARSYTGRPGVVAFDHGFHGRTNM--TM-ALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIF 189 (420)
T ss_pred HHHHhcCCCcEEEECCCcCCCcHH--HH-HhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHH
Confidence 88754443 455 44445544332 11 1111 0 112222211100 0 144566655
Q ss_pred cCCCCCccCCceeEEEEeccccCCCceec-ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc--hhHhhhcCccEEE
Q 018240 126 RDPKGEIVYPTTRLICLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV--PVRRLVQAADSAS 202 (359)
Q Consensus 126 ~~~~~~~~~~~~~~v~i~~~~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~~d~~~ 202 (359)
... ...+++.+|++++... .+|..+ +.+++++|+++|++||+++|+||++..... .+. ........+|++
T Consensus 190 ~~~---~~~~~iAavi~Epi~g-~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr--~g~~~a~~~~~~~pDi~- 262 (420)
T TIGR00700 190 VID---VGANNVAALVIEPVQG-EGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFAR--TGAMFACEHEGPEPDLI- 262 (420)
T ss_pred Hhh---cCCCcEEEEEECCccC-CCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcc--cchhHHHhhcCCCCCEE-
Confidence 310 0115799999999887 467754 557799999999999999999999753222 232 112222245654
Q ss_pred EeccccCCCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhc----
Q 018240 203 VCLSKGLGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQ---- 276 (359)
Q Consensus 203 ~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~---- 276 (359)
+++|.++.+.. |++++++++++.+... ..+.++..+++.++++..+++...+ ...++..+..+++++.|++
T Consensus 263 -~lsK~l~~G~pig~v~~~~~i~~~~~~~--~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~ 339 (420)
T TIGR00700 263 -TTAKSLADGLPLSGVTGRAEIMDAPAPG--GLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAV 339 (420)
T ss_pred -EeeccccCCcceEEEEecHHHHhhcCCC--CcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhh
Confidence 57899974322 7788898988776432 2445555667777777777654322 2344455555555555554
Q ss_pred CCCceEecCCccceEEEEEeccc-----hHHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 277 LKGLRVDVDAVETNIVYFEITED-----SKLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 277 ~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
.|.+... ...+.++++.+..+ .......+.+.+.++||.+.|++ ...+|++++..++++++++++++|.++
T Consensus 340 ~~~~~~v--rg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~~~~l~~~~~~l~~~ 417 (420)
T TIGR00700 340 DPRIGDV--RGLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSEGLDILCAI 417 (420)
T ss_pred CCCEEEe--eccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCcCHHHHHHHHHHHHHH
Confidence 3333322 23577778776321 12245677788889999998865 468999998778999999999999988
Q ss_pred HH
Q 018240 350 YA 351 (359)
Q Consensus 350 ~~ 351 (359)
+.
T Consensus 418 l~ 419 (420)
T TIGR00700 418 LA 419 (420)
T ss_pred hh
Confidence 74
No 298
>PRK06062 hypothetical protein; Provisional
Probab=99.91 E-value=1.6e-21 Score=175.07 Aligned_cols=337 Identities=16% Similarity=0.135 Sum_probs=213.6
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCc---cCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHHh
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDV---LMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~~ 73 (359)
.++|||.++ +....+|++.+++.+....... ....+...++.+.++++.+. +.+.+++||++|+..+++.+
T Consensus 53 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklA 132 (451)
T PRK06062 53 RRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMA 132 (451)
T ss_pred CEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHH
Confidence 367899886 3445558898888875543211 12356677888888888753 46789999999999999988
Q ss_pred hhhcC-CeEEecC-CCcceeeccccccccCCc-----------cceeeecCCCCC------CC-------HHHHHHHhcC
Q 018240 74 CETRG-SEVILGD-NSHIHIYENGGISTIGGV-----------HPRTVKNNQDGT------MD-------IDLIEAAIRD 127 (359)
Q Consensus 74 ~~~~g-~~vl~~~-~~~~~~~~~~~~~~~~g~-----------~~~~v~~~~~~~------~~-------~~~l~~~l~~ 127 (359)
....| .+|+... .+|..+.. + ....+. .+..++.+.... -| ++.+++.++.
T Consensus 133 r~~tgr~~ii~~~~~yHG~t~~--a-ls~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~ 209 (451)
T PRK06062 133 RLHTGRPKVLSAYRSYHGGTGS--A-INLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIEL 209 (451)
T ss_pred HHhhCCceEEEEeCCCCCCCHH--H-HhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHh
Confidence 75444 3465444 44444322 1 111110 111121111110 12 5677777753
Q ss_pred CCCCccCCceeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEe
Q 018240 128 PKGEIVYPTTRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVC 204 (359)
Q Consensus 128 ~~~~~~~~~~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s 204 (359)
. ...++.+|++++...+ .|.. .|.+++++++++|++||+++|+||++... +..|.. ...+.-.+|++ +
T Consensus 210 ~----~~~~iAaviiEPv~g~-gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGf--GRtG~~~a~~~~gv~PDi~--t 280 (451)
T PRK06062 210 E----GPSTIAAILLESVPGT-AGILVPPPGYLAGVRELCDRHGIVLIADEVMAGF--GRTGKWFAIEHFGVVPDLI--T 280 (451)
T ss_pred c----CCCceEEEEEccccCC-CCcccCCHHHHHHHHHHHHHcCCEEEeeccccCC--CcCcHHHHHHhcCCCCCee--e
Confidence 1 1146899999999885 4554 67799999999999999999999998632 222322 11222356655 5
Q ss_pred ccccCCC---ceeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHH-HHHHHHHhcC--
Q 018240 205 LSKGLGA---PVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKA-KLLAEGLNQL-- 277 (359)
Q Consensus 205 ~~K~~g~---~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~-~~l~~~l~~~-- 277 (359)
++|.+|+ |.|+ +++++++.+.+.......+.++..+++.++++..+++...+ +..++..++. ++|++.|+++
T Consensus 281 ~gK~lggG~~Piga-v~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~ 359 (451)
T PRK06062 281 FAKGVNSGYVPLGG-VAISEAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRELAE 359 (451)
T ss_pred echhhhcCCcCcEE-EEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 6798865 4556 55666888776432113455666778888888888876543 2444455554 4666666553
Q ss_pred --CCceEecCCccceEEEEEeccch-------H-----HHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHH
Q 018240 278 --KGLRVDVDAVETNIVYFEITEDS-------K-----LYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTL 343 (359)
Q Consensus 278 --~g~~~~~~~~~~~~~~~~~~~~~-------~-----~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~ 343 (359)
|.+.-. ...+.++.+.+..+. . .....+.+.|.++||.+.+. .+.+|++++..++++++++++
T Consensus 360 ~~~~v~~v--rG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~-~~~lrl~ppl~~t~~eid~~~ 436 (451)
T PRK06062 360 RHPSVGEV--RGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVN-GNRIHVVPPCTVTEDEVREGL 436 (451)
T ss_pred cCCcEEeE--eccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEeec-CCEEEEECCccCCHHHHHHHH
Confidence 222111 234555555553210 0 12457888899999998654 468999998899999999999
Q ss_pred HHHHHHHHHHHh
Q 018240 344 SCFQKIYAGVCE 355 (359)
Q Consensus 344 ~~l~~~~~~~~~ 355 (359)
++++++++++..
T Consensus 437 ~~l~~~l~~~~~ 448 (451)
T PRK06062 437 AILDAALAVADA 448 (451)
T ss_pred HHHHHHHHHhhh
Confidence 999999987653
No 299
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.91 E-value=2.7e-21 Score=173.51 Aligned_cols=339 Identities=14% Similarity=0.107 Sum_probs=217.4
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC----ccCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD----VLMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~----~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~ 72 (359)
.++|||.++ +....+|++.+++.+...... .+..++...++.+.+++.++. +...+++||++|+..|++.
T Consensus 53 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~Alkl 132 (457)
T PRK05639 53 NVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKV 132 (457)
T ss_pred CEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHH
Confidence 367899886 344556999988887654321 233356777888999988764 4568999999999999999
Q ss_pred hhhhcCC-eEEec-CCCcceeeccccccccCC--------c-----cceeeecCCCCC--------CCH--------HHH
Q 018240 73 HCETRGS-EVILG-DNSHIHIYENGGISTIGG--------V-----HPRTVKNNQDGT--------MDI--------DLI 121 (359)
Q Consensus 73 ~~~~~g~-~vl~~-~~~~~~~~~~~~~~~~~g--------~-----~~~~v~~~~~~~--------~~~--------~~l 121 (359)
+....|. +|+.. ..+|..+.. + ....+ . .+..++.+.... -+. +.+
T Consensus 133 Ar~~tgr~~ii~~~~~yHG~t~~--a-~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l 209 (457)
T PRK05639 133 SKFSTRRPWILAFIGAYHGQTLG--A-TSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYL 209 (457)
T ss_pred HHHhcCCCeEEEECCCcCCccHH--H-HHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHH
Confidence 8754443 45544 445554432 1 11111 0 122333321110 022 234
Q ss_pred HHHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCc
Q 018240 122 EAAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAA 198 (359)
Q Consensus 122 ~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~ 198 (359)
++.+... ..+..++.+|++++...+ +|. ..|.++++++.++|++||+++|+||++. | ++..|.. ...+.-.+
T Consensus 210 e~~l~~~--~~~~~~iAAvI~EPiqg~-gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G-~GrtG~~~a~~~~gv~P 284 (457)
T PRK05639 210 ENYVFSH--VVPPDEVAALFAEPIQGD-AGIVVPPENFFKELKKLLDEHGILLVMDEVQT-G-IGRTGKWFASEWFEVKP 284 (457)
T ss_pred HHHHHHh--hcCCCceEEEEECCccCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-c-cCcCchHHHHHhcCCCC
Confidence 4443210 001157999999998884 566 5667999999999999999999999985 2 3333432 12222356
Q ss_pred cEEEEeccccCCCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhc
Q 018240 199 DSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQ 276 (359)
Q Consensus 199 d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~ 276 (359)
|+++ ++|.+++..+ |.+++++++.+.. ......++..++..++++...++...+ +..++..++.++|++.|++
T Consensus 285 Div~--~gK~l~gG~pi~av~~~~~i~~~~---~~~~~~T~~g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~ 359 (457)
T PRK05639 285 DLII--FGKGVASGMGLSGVIGRKELMDLT---SGSALLTPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLE 359 (457)
T ss_pred CEEE--echhhcCCCcceeEEehHHHHhhc---CCCcccCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHH
Confidence 7666 6798864444 6677888887732 122345556677778888888866543 3456666777888888776
Q ss_pred C-CCceEe-cCCccceEEEEEeccc----hHHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018240 277 L-KGLRVD-VDAVETNIVYFEITED----SKLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 277 ~-~g~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
+ .+..+. .-...+.++.+.+..+ .......+.+.+.++|+.+.+.+ ...+|+.++..++++++++++++|++
T Consensus 360 l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g~~~~~lr~~Ppl~it~~~id~~~~~l~~ 439 (457)
T PRK05639 360 MKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSYGMFGNVIRITPPLVITKEIAEKGLEIMER 439 (457)
T ss_pred HHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHH
Confidence 3 112211 1134556666655321 11235678888899999996654 57899999999999999999999999
Q ss_pred HHHHHH
Q 018240 349 IYAGVC 354 (359)
Q Consensus 349 ~~~~~~ 354 (359)
+++++.
T Consensus 440 ~l~~~~ 445 (457)
T PRK05639 440 AIKDAL 445 (457)
T ss_pred HHHHHH
Confidence 998764
No 300
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.91 E-value=6.2e-22 Score=177.49 Aligned_cols=331 Identities=17% Similarity=0.147 Sum_probs=213.5
Q ss_pred cccccccCCC----CCChHHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHh-CCCCeEEcCCchHHHHHHHHHhhhh
Q 018240 3 TRTVDLRSDT----VTKPTEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVM-GKEAGLFVPSGTMGNLISVLVHCET 76 (359)
Q Consensus 3 ~~~id~~~~~----~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~-~~~~~~~~~~gt~a~~~~l~~~~~~ 76 (359)
.+++||.++. ....+|.+.+++.+.... ...+...+...++.+.+++.+ +.+..++++||++|+..+++.++..
T Consensus 50 ~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~ 129 (426)
T PRK00062 50 NEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGLSFGAPTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGY 129 (426)
T ss_pred CEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHH
Confidence 3678998863 335568888888775543 222345677788999999876 4556788999999999999987742
Q ss_pred -cCCeEEecCCCcceeecccccccc------------CCcc-------ceeeecCCCCCCCHHHHHHHhcCCCCCccCCc
Q 018240 77 -RGSEVILGDNSHIHIYENGGISTI------------GGVH-------PRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPT 136 (359)
Q Consensus 77 -~g~~vl~~~~~~~~~~~~~~~~~~------------~g~~-------~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 136 (359)
.+++|+..+++|..... + .... .+.. ...++. .|++.+++.+++.. .+
T Consensus 130 ~g~~~ii~~~~~yHG~t~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~-----~~ 197 (426)
T PRK00062 130 TGRDKIIKFEGCYHGHAD-S-LLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPY-----NDLEAVEELFEEYG-----DE 197 (426)
T ss_pred hCCCeEEEEcCccCCchh-h-hhhccCccccccCCCCCCCCCcccccceEEcCC-----CCHHHHHHHHHhCC-----Cc
Confidence 24567777776555331 0 0110 0101 111121 27889998886421 47
Q ss_pred eeEEEEeccccCCCceecC-hhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCce-e
Q 018240 137 TRLICLENTHANCGGRCLS-VEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV-G 214 (359)
Q Consensus 137 ~~~v~i~~~~~~ptG~~~~-~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~-g 214 (359)
+++|++++.+++ +|...+ .+++++|.++|++||+++|+||+|.. ...........+...+|+ .+++|.++.+. .
T Consensus 198 ~aaiivEpv~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G-~r~g~~~~~~~~~~~pDi--~~~gK~l~~G~p~ 273 (426)
T PRK00062 198 IAAVIVEPVAGN-MGVVPPKPGFLEGLRELCDEHGALLIFDEVMTG-FRVALGGAQGYYGVTPDL--TTLGKIIGGGLPV 273 (426)
T ss_pred EEEEEEeCCcCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEeechhc-cccCCccHHHHhCCCcch--HhhhhHhhCCCcc
Confidence 889999988885 677765 78999999999999999999999853 222111111112223554 47789996432 2
Q ss_pred eEEecCHHHHHHHHHHHH-hhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhc----CCCceEecCCcc
Q 018240 215 SVIVGSKEFIKKARRLRK-TLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQ----LKGLRVDVDAVE 288 (359)
Q Consensus 215 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~----~~g~~~~~~~~~ 288 (359)
|++++++++.+.++.... ..+.++..++..++++..+++...+ +..++..++.+++++.|++ . ++.... +..
T Consensus 274 ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v-rg~ 351 (426)
T PRK00062 274 GAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKA-GIPLTV-NRV 351 (426)
T ss_pred eeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHc-CCceEE-EEe
Confidence 557788888887742221 2333445567777777777754332 2455556666666666653 4 443322 235
Q ss_pred ceEEEEEeccc-----------hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 289 TNIVYFEITED-----------SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 289 ~~~~~~~~~~~-----------~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+.++.+.+..+ +......+.+.|.++||.+.+.+...+++++ .++++++++++++|+++++++
T Consensus 352 G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~~~~~~~~~--~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 352 GSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQFEAGFVSA--AHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred cceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecCCcCceeeec--cCCHHHHHHHHHHHHHHHHhh
Confidence 66655555321 0113467889999999999876656677764 799999999999999998764
No 301
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.91 E-value=1.9e-21 Score=174.26 Aligned_cols=337 Identities=16% Similarity=0.165 Sum_probs=212.8
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCcc----CCChHHHHHHHHHHHHhC---CCCeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDVL----MHDPTAFRLETEMAKVMG---KEAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~l~~~la~~~~---~~~~~~~~~gt~a~~~~l~ 71 (359)
.++|||.++ +....+|++.+++.+.......+ ..++...++.+.|++.++ .+...+++||++|+..+++
T Consensus 54 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~Alk 133 (441)
T PRK05769 54 NVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIK 133 (441)
T ss_pred CEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHH
Confidence 357899887 34455588888888755432211 125667788888888875 3456889999999999999
Q ss_pred HhhhhcC-CeEEecC-CCcceeeccccccccCCc-------------cceeeecCCCCC-----CC--------HHHHHH
Q 018240 72 VHCETRG-SEVILGD-NSHIHIYENGGISTIGGV-------------HPRTVKNNQDGT-----MD--------IDLIEA 123 (359)
Q Consensus 72 ~~~~~~g-~~vl~~~-~~~~~~~~~~~~~~~~g~-------------~~~~v~~~~~~~-----~~--------~~~l~~ 123 (359)
.+....| .+|+.-+ .+|+.+.. + ....+. .+..++.+.... -+ .+.+++
T Consensus 134 lAr~~tgr~~Ii~~~~~yHG~t~~--~-ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~ 210 (441)
T PRK05769 134 IARYHTGRKYIIAFLGAFHGRTYG--S-LSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIED 210 (441)
T ss_pred HHHHHhCCCeEEEECCCcCCccHH--H-HHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHH
Confidence 8875444 3455444 44544432 1 111110 112222211100 01 233454
Q ss_pred -HhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCcc
Q 018240 124 -AIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAAD 199 (359)
Q Consensus 124 -~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d 199 (359)
.+++. .+..++.+|++++..++ .|. ..+.++++++.++|++||+++|+||++.. ++..+.. ...+...+|
T Consensus 211 ~~~~~~---~~~~~iaavi~Epv~g~-~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG--~gr~G~~~a~~~~gv~pD 284 (441)
T PRK05769 211 YLFKKL---VPPEEVAAIIVEPIQGE-GGYVVPPKNFFKELRKLADKYGILLIDDEVQTG--MGRTGKMFAIEHFGVEPD 284 (441)
T ss_pred HHHhhc---cCCCceEEEEECcccCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEechhhC--CCcccceehhhccCCCCC
Confidence 22210 01157899999998884 455 45679999999999999999999999862 2222321 122222467
Q ss_pred EEEEeccccCCCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCC
Q 018240 200 SASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLK 278 (359)
Q Consensus 200 ~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~ 278 (359)
+++ ++|.++.+.. |++++++++.+.. ....+.++..++..++++..+++...++..++..++.++|++.|+++.
T Consensus 285 ivt--~~K~l~~G~p~gav~~~~~i~~~~---~~~~~~T~~g~p~~~aaa~a~L~~l~~~~~~~~~~~g~~l~~~L~~l~ 359 (441)
T PRK05769 285 IIT--LAKAIAGGLPLGAVIGRAELMFLP---PGSHANTFGGNPVAAAAALATLEELEEGLLENAQKLGEYLRKELKELK 359 (441)
T ss_pred EEE--EcccccCCcccEEEEEehhhhhcC---CCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 764 5688864322 5677787776432 223455555667777777877765433466777788888888887641
Q ss_pred -CceEe-cCCccceEEEEEeccc----hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 279 -GLRVD-VDAVETNIVYFEITED----SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 279 -g~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
...+. .....+.++.+.+..+ .......+.+.+.++||.+.+.+...+|++++..++++|++++++++++++++
T Consensus 360 ~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 360 EKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAGKSAIRIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred HhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 11111 1123556666666331 11235678888889999998877789999999899999999999999999876
Q ss_pred H
Q 018240 353 V 353 (359)
Q Consensus 353 ~ 353 (359)
+
T Consensus 440 ~ 440 (441)
T PRK05769 440 L 440 (441)
T ss_pred h
Confidence 4
No 302
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.91 E-value=8.3e-22 Score=163.75 Aligned_cols=308 Identities=13% Similarity=0.116 Sum_probs=181.9
Q ss_pred cc-CCChHHHHHHHHHHHHhCCCCe-EEcCC-chHHHHH-HHHHh-hh-----------hcCCeEEecCCCcceeecccc
Q 018240 33 VL-MHDPTAFRLETEMAKVMGKEAG-LFVPS-GTMGNLI-SVLVH-CE-----------TRGSEVILGDNSHIHIYENGG 96 (359)
Q Consensus 33 ~~-~~~~~~~~l~~~la~~~~~~~~-~~~~~-gt~a~~~-~l~~~-~~-----------~~g~~vl~~~~~~~~~~~~~~ 96 (359)
-| |.-.+..++|+.+++++|.+.. ++..+ .+-.++. ++..+ +. .+.-++++|.|.|--.+ +
T Consensus 63 NY~G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHF---a 139 (425)
T PF12897_consen 63 NYPGGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHF---A 139 (425)
T ss_dssp SS-S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHH---H
T ss_pred CCCCccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHH---H
Confidence 47 7788999999999999999875 33333 2222221 22211 11 12336899999965544 6
Q ss_pred ccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHH-HHHcCcEEEE
Q 018240 97 ISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEI-AKKHGLKLHI 175 (359)
Q Consensus 97 ~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~-~~~~~~~li~ 175 (359)
+++..|++.+.|+..++| +|++.+++.+.+. +.+|.+|+.+.++||||.+|+.|-+++++.+ +...+..|+.
T Consensus 140 i~E~~Giemi~VpM~~dG-PDmD~Ve~LV~~D------~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~W 212 (425)
T PF12897_consen 140 ITEHFGIEMIPVPMTEDG-PDMDMVEELVAED------PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFW 212 (425)
T ss_dssp HHHHCT-EEEEEEEETTE-E-HHHHHHHTHTS------TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEE
T ss_pred HHHhhCcEEEecCCCCCC-CCHHHHHHHHhcC------CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEe
Confidence 799999999999998887 5999999998532 7899999999999999999999989998888 4467999999
Q ss_pred ecccccchhhhcC-c----hhHhh---hcCcc-EEEE-eccccCCCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHH
Q 018240 176 DGARIFNAAVALG-V----PVRRL---VQAAD-SASV-CLSKGLGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVL 244 (359)
Q Consensus 176 D~a~~~~~~~~~~-~----~~~~~---~~~~d-~~~~-s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (359)
|+||.+..+.... . ..... ....| ++.+ |+||.-..+.| +++.++++.++.++......+.+..-..++
T Consensus 213 DNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~tIgpdKvNQL 292 (425)
T PF12897_consen 213 DNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQTIGPDKVNQL 292 (425)
T ss_dssp E-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH-S---HHHHH
T ss_pred ecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcCceeCccHHHHH
Confidence 9998776663221 1 11111 12344 5555 99998765566 888899988888776555444444333333
Q ss_pred HHHHH----H-HHHHhHHHHh----hhHHHHHHHHHHHHh-cCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhc
Q 018240 245 CAAAL----V-ALQENVLVML----DGDHKKAKLLAEGLN-QLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEH 314 (359)
Q Consensus 245 ~~~~~----~-~l~~~~~~~~----~~~~~~~~~l~~~l~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 314 (359)
..+.. . +++.+.+... -+...-.+.|.+.|. .. ++.-+..|.+++|+++.+... .+..+++.+.+.
T Consensus 293 RHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~-~ia~Wt~P~GGYFIsld~~~G---~AkrvV~lakeA 368 (425)
T PF12897_consen 293 RHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGL-GIASWTKPKGGYFISLDVLDG---TAKRVVELAKEA 368 (425)
T ss_dssp HHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGG-TSEEE---SBSS-EEEEESTT----HHHHHHHHHHT
T ss_pred HHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCC-CeeEecCCCCceEEEEecCCC---hHHHHHHHHHHh
Confidence 33321 1 2222222111 122233455566666 44 554456678999999999874 788999999999
Q ss_pred CceeccCC----------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 315 GVLVMPES----------STRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 315 gi~~~~~~----------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
||.+.+.| ...|||+++ .-+.+|++.+.+.+.-+++-...
T Consensus 369 GV~LT~AGAtfPyg~DP~D~nIRiAPS-~P~leel~~Am~~~~~cv~la~~ 418 (425)
T PF12897_consen 369 GVALTPAGATFPYGKDPRDSNIRIAPS-YPSLEELETAMDVFATCVKLAAV 418 (425)
T ss_dssp TEE---TTTTSGGG--TTS-EEEE--S-SS-HHHHHHHHHHHHHHHHHHHH
T ss_pred CceeCCCCCCCCCCCCCCCCcEEecCC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99996643 346999998 68899999999999988775543
No 303
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.91 E-value=3.9e-22 Score=191.11 Aligned_cols=340 Identities=13% Similarity=0.098 Sum_probs=210.6
Q ss_pred ccccccCCCCCChH-HHHHHHHHcCCC----CCC-ccC----CChHHHHHHHHHHHHhCCCC----eEEcCCchHHHHHH
Q 018240 4 RTVDLRSDTVTKPT-EAMRAAMASAEV----DDD-VLM----HDPTAFRLETEMAKVMGKEA----GLFVPSGTMGNLIS 69 (359)
Q Consensus 4 ~~id~~~~~~~~~~-~~~~~a~~~~~~----~~~-~~~----~~~~~~~l~~~la~~~~~~~----~~~~~~gt~a~~~~ 69 (359)
.+++|.+...+.+. ..+.+++.+... +.. .+. ......+.|+.+++++|++. .++++|+|+|+..+
T Consensus 34 ~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlv 113 (805)
T PLN02724 34 GVVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLV 113 (805)
T ss_pred CCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHH
Confidence 35777777665543 455555433211 111 111 13356889999999999842 26777788888888
Q ss_pred HHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--------CCCCCCH--HHHHHHhcCC--CCCccCCce
Q 018240 70 VLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--------QDGTMDI--DLIEAAIRDP--KGEIVYPTT 137 (359)
Q Consensus 70 l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--------~~~~~~~--~~l~~~l~~~--~~~~~~~~~ 137 (359)
+..+..++|++|+++...|.+.......++..|+++..++.+ ..+.++. ++|++.++.. ......+++
T Consensus 114 a~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t 193 (805)
T PLN02724 114 GETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAY 193 (805)
T ss_pred HHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCc
Confidence 777644689999998888877653111234468888887654 3343443 5566653200 000011456
Q ss_pred eEEEEeccccCCCceecChhhHHHHHHHHHHc-----CcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCc
Q 018240 138 RLICLENTHANCGGRCLSVEYTDSVGEIAKKH-----GLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAP 212 (359)
Q Consensus 138 ~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~-----~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~ 212 (359)
++|.+.+..| -||...|.+.+..+.+.++++ ++++++|.+|+.+.. ...+..+ ++|++++|+||++|+|
T Consensus 194 ~LVa~~~vsN-~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~---piDv~~~--~~Dfl~~S~HK~~GgP 267 (805)
T PLN02724 194 NLFAFPSECN-FSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTS---PPDLSRY--PADFVVVSFYKIFGYP 267 (805)
T ss_pred ceEEEEcccc-CCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCC---CCChhhc--CCCEEEEecceeccCC
Confidence 8888866554 899999965443333333222 368999999866544 3334444 7999999999999989
Q ss_pred ee-eEEecCHHHHHHHHHHHHh------------------------hCCCcchhHHHHHHHHHHH---HH-hHHHHhhhH
Q 018240 213 VG-SVIVGSKEFIKKARRLRKT------------------------LGGGMRQVGVLCAAALVAL---QE-NVLVMLDGD 263 (359)
Q Consensus 213 ~g-g~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~l---~~-~~~~~~~~~ 263 (359)
.| |+++.++++.+.+...... -.++....++ ++...++ .. ..+.+.++.
T Consensus 268 ~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i--~~l~aal~~l~~ig~~~I~~~~ 345 (805)
T PLN02724 268 TGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSI--AALRHGFKLLNRLTISAIAMHT 345 (805)
T ss_pred CCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHH--HHHHHHHHHHHHhChHHHHHHH
Confidence 88 9999888877654321110 0111111111 1112233 22 334455667
Q ss_pred HHHHHHHHHHHhcCC------CceEecCC-------ccceEEEEEeccchH--HHHHHHHHHHHhcCceeccC-------
Q 018240 264 HKKAKLLAEGLNQLK------GLRVDVDA-------VETNIVYFEITEDSK--LYAACLLKKLEEHGVLVMPE------- 321 (359)
Q Consensus 264 ~~~~~~l~~~l~~~~------g~~~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~~~~~------- 321 (359)
.++.+++.+.|++++ ++.+..+. ..++++.|++....+ +...++...+..+||.+..|
T Consensus 346 ~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~ 425 (805)
T PLN02724 346 WALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPGA 425 (805)
T ss_pred HHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCchH
Confidence 788899999999885 46664322 246788888765211 22344544457789988322
Q ss_pred --------------------------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 322 --------------------------------SSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 322 --------------------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
..+.+|+|+++++|.+|++++++.|++.+.
T Consensus 426 ~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~ 487 (805)
T PLN02724 426 CAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFV 487 (805)
T ss_pred HHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhh
Confidence 126799999999999999999999999764
No 304
>PRK06917 hypothetical protein; Provisional
Probab=99.91 E-value=4.1e-21 Score=172.27 Aligned_cols=343 Identities=18% Similarity=0.164 Sum_probs=217.7
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC-cc---CCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD-VL---MHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~-~~---~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~ 72 (359)
.++|||.++ +....+|.+.+++.+...... .+ ..++...++.+.+++.+.. +...+++||++|+..+++.
T Consensus 31 ~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~Alkl 110 (447)
T PRK06917 31 NKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKI 110 (447)
T ss_pred CEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHH
Confidence 367898876 344556999988887654321 11 2356667888889888754 3458889999999999998
Q ss_pred hhhh------cC-CeEEecCC-CcceeeccccccccCCc------------cceeeecCC--CCC----------CCHHH
Q 018240 73 HCET------RG-SEVILGDN-SHIHIYENGGISTIGGV------------HPRTVKNNQ--DGT----------MDIDL 120 (359)
Q Consensus 73 ~~~~------~g-~~vl~~~~-~~~~~~~~~~~~~~~g~------------~~~~v~~~~--~~~----------~~~~~ 120 (359)
+... ++ .+|+.-.. +|..+.. + ....+. .+..++.+. ... -+++.
T Consensus 111 Ar~~~~~rg~t~r~~ii~~~~~yHG~t~~--a-ls~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 187 (447)
T PRK06917 111 AIQHFQERGIQGKHKILSRWMSYHGITMG--A-LSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATE 187 (447)
T ss_pred HHHHHHhcCCCCCCEEEEECCCcCCccHH--H-HHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHH
Confidence 8531 22 45665554 4443322 1 111111 011111111 000 02356
Q ss_pred HHHHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh--HhhhcC
Q 018240 121 IEAAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV--RRLVQA 197 (359)
Q Consensus 121 l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~ 197 (359)
+++.+++.. ..++.+|++++...+.+|+ ..|.++++++.++|++||+++|+||++.. ++..+... ..+.-.
T Consensus 188 le~~i~~~~----~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tG--fGRtG~~~a~~~~gv~ 261 (447)
T PRK06917 188 LETAIERIG----AEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTG--LGRTGAMFAMEHWGVE 261 (447)
T ss_pred HHHHHHhcC----CCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhC--cCcccchhhHHhcCCC
Confidence 677776321 1368999999988755565 45679999999999999999999999752 22233322 222235
Q ss_pred ccEEEEeccccCCCce--eeEEecCHHHHHHHHHHH--HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHH
Q 018240 198 ADSASVCLSKGLGAPV--GSVIVGSKEFIKKARRLR--KTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAE 272 (359)
Q Consensus 198 ~d~~~~s~~K~~g~~~--gg~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~ 272 (359)
+|++ +++|.++++. .+.+++++++.+.+.... ...++++..+++.++++...++...+ +..++..++.++|++
T Consensus 262 PDi~--~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~ 339 (447)
T PRK06917 262 PDIM--TLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIK 339 (447)
T ss_pred CCEE--EeeehhccCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 6765 5568886432 255667888887764221 12345666678888888888865533 355667777778877
Q ss_pred HHhcCC---CceEecCCccceEEEEEeccc---------hHHHHHHHHHHHHhcCceeccCC-------CcEEEEEeCCC
Q 018240 273 GLNQLK---GLRVDVDAVETNIVYFEITED---------SKLYAACLLKKLEEHGVLVMPES-------STRVRIVVHHQ 333 (359)
Q Consensus 273 ~l~~~~---g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~~gi~~~~~~-------~~~lRi~~~~~ 333 (359)
.|+++. ++.... ...+.++.+.+..+ .......+.+.+.++||.+.+.+ .+.+|++++..
T Consensus 340 ~L~~l~~~~~~i~~v-rG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~ 418 (447)
T PRK06917 340 GLQKVQQQSTIIGDV-RGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMT 418 (447)
T ss_pred HHHHHHhcCCCEEEE-eecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCc
Confidence 777641 221111 33556665655321 01235678888899999997642 46899999889
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhc
Q 018240 334 ISANDVHYTLSCFQKIYAGVCEEN 357 (359)
Q Consensus 334 ~~~~~i~~~~~~l~~~~~~~~~~~ 357 (359)
++++|++++++++.++++++.++.
T Consensus 419 it~~eid~~~~~l~~~l~~~~~~~ 442 (447)
T PRK06917 419 ITYSELDELLSIFAKSVEEMMQKG 442 (447)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999886543
No 305
>PRK07046 aminotransferase; Validated
Probab=99.91 E-value=2.5e-21 Score=173.53 Aligned_cols=329 Identities=19% Similarity=0.188 Sum_probs=213.6
Q ss_pred ccccccCCC----CCChHHHHHHHHHcCCCCCCc-cCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcC
Q 018240 4 RTVDLRSDT----VTKPTEAMRAAMASAEVDDDV-LMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRG 78 (359)
Q Consensus 4 ~~id~~~~~----~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g 78 (359)
++|||.++. ....+|.+.+++.+....... ...++...++.+.+++.++.+...+++|||+|+..+++.++.-.|
T Consensus 76 ~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~AlrlAR~~TG 155 (453)
T PRK07046 76 RYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTMLPSEDAAWVGEELARRFGLPYWQVATTATDANRFVLRWARAVTG 155 (453)
T ss_pred EEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHHHhhC
Confidence 578987663 334458888888876543222 234677788889999988877789999999999999999876444
Q ss_pred C-eEEecCC-Ccceeeccccccc-----------cCCc------cceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeE
Q 018240 79 S-EVILGDN-SHIHIYENGGIST-----------IGGV------HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRL 139 (359)
Q Consensus 79 ~-~vl~~~~-~~~~~~~~~~~~~-----------~~g~------~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 139 (359)
. +|+..+. +|+.... .... ..|. .+..++.+ |++.+++.+.. .++.+
T Consensus 156 r~~ii~~~g~YHG~~d~--~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-----d~~~l~~~l~~-------~~vAa 221 (453)
T PRK07046 156 RPKILVFNGCYHGTVDD--VFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFN-----DLAALEAALAD-------GDVAA 221 (453)
T ss_pred CCEEEEECCCCCCCcHH--hHhhccCCCCCCCCCCCCCCccccCceEeeCCC-----CHHHHHHHhCC-------CCeEE
Confidence 4 4664444 4443211 0011 0010 11112222 88999998863 57999
Q ss_pred EEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEe
Q 018240 140 ICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIV 218 (359)
Q Consensus 140 v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~ 218 (359)
|++++...+.+-...+.+++++++++|++||+++|+||++.++ .. .+.....+.-.+|+++ +.|.+|++.. |.++
T Consensus 222 vi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr-~g-~Gg~~~~~gv~PDi~t--~gK~lggG~Pi~av~ 297 (453)
T PRK07046 222 VLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTIS-SG-PGGYTRAHGLEPDFLV--VGKPIAGGVPCAVYG 297 (453)
T ss_pred EEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCc-cC-CcchhHHhCCCcccee--ehhhhcCCCcceeee
Confidence 9999998865434556699999999999999999999998632 11 1222222333567664 5788864332 5677
Q ss_pred cCHHHHHHHHHHH-------HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC---CCceEecCCc
Q 018240 219 GSKEFIKKARRLR-------KTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL---KGLRVDVDAV 287 (359)
Q Consensus 219 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~ 287 (359)
+++++.+.+.... ...++++..+++.++++...++...+ +..++..++.++|++.|+++ -++......
T Consensus 298 g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g- 376 (453)
T PRK07046 298 FSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTR- 376 (453)
T ss_pred ehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEE-
Confidence 8889888765321 12455667788888888888865433 35566666777777777642 133322112
Q ss_pred cceEEEEEeccc------------hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 288 ETNIVYFEITED------------SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 288 ~~~~~~~~~~~~------------~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
.+..+.+.+..+ +......+...|.++||.+.+.+ ..+++++ .++++|+++++++++++++++.
T Consensus 377 ~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~-~~~~~~p--~~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 377 VGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITPFH-NMMLVCP--ATTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred eCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEeccc-CcEEEeC--CCCHHHHHHHHHHHHHHHHHHh
Confidence 233344443210 01123467777888999997743 4677776 5999999999999999998763
No 306
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.91 E-value=2.5e-21 Score=173.41 Aligned_cols=329 Identities=17% Similarity=0.188 Sum_probs=210.7
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC-ccCCChHHHHHHHHHHHHhC-CCCeEEcCCchHHHHHHHHHhhhh
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD-VLMHDPTAFRLETEMAKVMG-KEAGLFVPSGTMGNLISVLVHCET 76 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~l~~~la~~~~-~~~~~~~~~gt~a~~~~l~~~~~~ 76 (359)
.++|||.++ +....+|.+.+++.+...... ....++...++.+.+++.++ .+.+.+++||++|+..+++.+...
T Consensus 53 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~ 132 (428)
T PRK12389 53 NKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGTPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAY 132 (428)
T ss_pred CEEEEccccccccccCCCCHHHHHHHHHHHHhCCccCCCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHh
Confidence 357898776 334555999988887654322 22345667788888888774 455689999999999999988754
Q ss_pred cCC-eEEecC-CCcceeeccccccccCCc-------------------cceeeecCCCCCCCHHHHHHHhcCCCCCccCC
Q 018240 77 RGS-EVILGD-NSHIHIYENGGISTIGGV-------------------HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYP 135 (359)
Q Consensus 77 ~g~-~vl~~~-~~~~~~~~~~~~~~~~g~-------------------~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~ 135 (359)
.|. +|+.-. .+|..+.. . ....+. .+..++.+ |++.+++.+++.. .
T Consensus 133 tgr~~ii~~~~~yHG~t~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~-----~ 199 (428)
T PRK12389 133 TGRTKIIKFAGCYHGHSDL--V-LVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFN-----DIEALKEALDKWG-----D 199 (428)
T ss_pred hCCCEEEEECCCcCCChHH--H-HHhcCCcccccCCCCCCCCCCcccCceEEcCCC-----CHHHHHHHHHhcC-----C
Confidence 443 455444 44443321 1 111110 11112222 7889988887422 4
Q ss_pred ceeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCC--c
Q 018240 136 TTRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGA--P 212 (359)
Q Consensus 136 ~~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~--~ 212 (359)
++.+|++++..++ .|.. .+.+++++|+++|++||+++|+||++..+ ....+.....+...+|++ +++|.+++ |
T Consensus 200 ~vaavi~EPv~g~-~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv~PDiv--t~gK~lggG~P 275 (428)
T PRK12389 200 EVAAVLVEPIVGN-FGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGVEPDLT--ALGKIIGGGLP 275 (428)
T ss_pred cEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCCCCCee--eechhhcCCCc
Confidence 6889999998874 5654 56799999999999999999999998643 221111111222356765 56788854 4
Q ss_pred eeeEEecCHHHHHHHHHHH-HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC---CCceEecCCc
Q 018240 213 VGSVIVGSKEFIKKARRLR-KTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL---KGLRVDVDAV 287 (359)
Q Consensus 213 ~gg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~ 287 (359)
.|+ +++++++.+.+.... ...++++..+++.++++...++...+ +..++..++.++|++.|+++ -++.......
T Consensus 276 i~a-v~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~ 354 (428)
T PRK12389 276 IGA-YGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRL 354 (428)
T ss_pred eeE-EeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEec
Confidence 555 577888888764211 23455666778888888888875543 35667777888888887763 1322211122
Q ss_pred cceEEEEEeccc-----------hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 288 ETNIVYFEITED-----------SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 288 ~~~~~~~~~~~~-----------~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.+ ++.+.+..+ +......+.+.|.++||.+.+.+...+. ++..++++|++++++++++++++
T Consensus 355 ~g-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~--~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 355 KG-ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSKYEAWF--LTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred Cc-EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCCCCCee--ecCCCCHHHHHHHHHHHHHHHHh
Confidence 33 333433211 0113567888889999999775444444 44589999999999999998865
No 307
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.91 E-value=4.1e-21 Score=172.65 Aligned_cols=338 Identities=14% Similarity=0.112 Sum_probs=211.6
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCC-C--c-cCCChHHHHHHHHHHHHhCC-------CCeEEcCCchHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDD-D--V-LMHDPTAFRLETEMAKVMGK-------EAGLFVPSGTMGNL 67 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~-~--~-~~~~~~~~~l~~~la~~~~~-------~~~~~~~~gt~a~~ 67 (359)
.++|||.++ +....+|++.+++.+..... . . ...++...++.+.+++.+.. +...+++||++|+.
T Consensus 64 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE 143 (472)
T PRK08742 64 RRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVE 143 (472)
T ss_pred CEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHH
Confidence 357899887 44566699998887754321 1 1 12356677888888887753 35688999999999
Q ss_pred HHHHHhhhh------c-CCeEEecCC-CcceeeccccccccCCc------------cceeeecCCCC----CC-------
Q 018240 68 ISVLVHCET------R-GSEVILGDN-SHIHIYENGGISTIGGV------------HPRTVKNNQDG----TM------- 116 (359)
Q Consensus 68 ~~l~~~~~~------~-g~~vl~~~~-~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~----~~------- 116 (359)
.|++.+... + ..+|+.... +|..+.. + ....+. .+..++.+... ..
T Consensus 144 ~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~g--a-ls~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~ 220 (472)
T PRK08742 144 VALKMAFHYFHNRGEHRRTRFIALENGYHGETIG--A-LAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYAL 220 (472)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchh--h-hhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHH
Confidence 999998642 2 245665554 4444322 1 111111 11222222111 11
Q ss_pred -CHHHHHHHhcCCCCCccCCceeEEEEec-cccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHh
Q 018240 117 -DIDLIEAAIRDPKGEIVYPTTRLICLEN-THANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRR 193 (359)
Q Consensus 117 -~~~~l~~~l~~~~~~~~~~~~~~v~i~~-~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~ 193 (359)
+++.+++.+++.. .++.+|++++ ..+ .+|+ ..|.+++++++++|++||+++|+||++..............
T Consensus 221 ~~~~~l~~~~~~~~-----~~iAAvI~EPviqg-~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~ 294 (472)
T PRK08742 221 QAADALQALFEQSP-----GEICALILEPRLQC-AGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQ 294 (472)
T ss_pred HHHHHHHHHHHhCC-----CceEEEEEcccccc-CCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHh
Confidence 2456666665311 5799999998 455 3465 56779999999999999999999999753322211111112
Q ss_pred hhcCccEEEEeccccCCCce--eeEEecCHHHHHHHHHH----HHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHH
Q 018240 194 LVQAADSASVCLSKGLGAPV--GSVIVGSKEFIKKARRL----RKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKK 266 (359)
Q Consensus 194 ~~~~~d~~~~s~~K~~g~~~--gg~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~ 266 (359)
+.-.+|++++ +|.++++. -+.+++++++.+.+... ....+.++..+++.++++...++...+ +..++..++
T Consensus 295 ~gv~PDiv~~--gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~ 372 (472)
T PRK08742 295 AGVMPDLLCL--SKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVIARNQPT 372 (472)
T ss_pred cCCCCCEEEE--cccccCCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 2235676655 58885432 24466788887765321 112455666678888888888876544 234555555
Q ss_pred HHHHHHHHhc---CCCceEecCCccceEEEEEeccch--------H-HHHHHHHHHHHhcCceeccCCCcEEEEEeCCCC
Q 018240 267 AKLLAEGLNQ---LKGLRVDVDAVETNIVYFEITEDS--------K-LYAACLLKKLEEHGVLVMPESSTRVRIVVHHQI 334 (359)
Q Consensus 267 ~~~l~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~ 334 (359)
.++|.+.++. .|.+.-. ...+.++.+.+..+. . .-...+.+.+.++||.+.+.+ +.+|+.++..+
T Consensus 373 g~~l~~~~~~~~~~~~i~dv--RG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-~vi~~~PpL~i 449 (472)
T PRK08742 373 AARMTQLAAQIGEHPHVADV--RQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPLG-DVLYWMPPYCV 449 (472)
T ss_pred HHHHHHHHHHHhcCCCeeeE--eccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEecC-CEEEEECCCCC
Confidence 5666555444 3322211 345666666663210 0 113567788889999997765 68999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHH
Q 018240 335 SANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 335 ~~~~i~~~~~~l~~~~~~~~ 354 (359)
+++++++++++|+++++++.
T Consensus 450 t~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 450 DEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred CHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998753
No 308
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.91 E-value=3.6e-21 Score=172.46 Aligned_cols=333 Identities=15% Similarity=0.177 Sum_probs=210.2
Q ss_pred cccccccCC----CCCChHHHHHH--HHHcCCCCC------CccCCChHHHHHHHHHHHHhC---CCCeEEcCCchHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRA--AMASAEVDD------DVLMHDPTAFRLETEMAKVMG---KEAGLFVPSGTMGNL 67 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~--a~~~~~~~~------~~~~~~~~~~~l~~~la~~~~---~~~~~~~~~gt~a~~ 67 (359)
.++|||.++ +....+|++.+ ++.+..... ......+...++.+.+++..+ .+...+++||++|++
T Consensus 45 ~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve 124 (443)
T PRK08297 45 RRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVE 124 (443)
T ss_pred CEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHH
Confidence 357899876 44455688888 777654221 111234566777778887762 345689999999999
Q ss_pred HHHHHhhhh-------c------CCeEEecCC-CcceeeccccccccCCccc-----------eeeecCC-C----C-C-
Q 018240 68 ISVLVHCET-------R------GSEVILGDN-SHIHIYENGGISTIGGVHP-----------RTVKNNQ-D----G-T- 115 (359)
Q Consensus 68 ~~l~~~~~~-------~------g~~vl~~~~-~~~~~~~~~~~~~~~g~~~-----------~~v~~~~-~----~-~- 115 (359)
.+++.+... + ..+|+.-.. +|+.+.. + ....+... ..++.+. . . .
T Consensus 125 ~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~--a-ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (443)
T PRK08297 125 NALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGY--T-LSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDL 201 (443)
T ss_pred HHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchh--h-hhhcCCcccccccCCCCCccccCCCCCCCCCccccc
Confidence 999988521 1 245765554 4444332 1 21111100 0010000 0 0 0
Q ss_pred --C------CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc
Q 018240 116 --M------DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL 187 (359)
Q Consensus 116 --~------~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~ 187 (359)
. +++++++.+.++. .++.+|++++...+.+-...|.+++++++++|++||+++|+||++... +..
T Consensus 202 ~~~~~~~~~~~~~~~~~i~~~~-----~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGf--GRt 274 (443)
T PRK08297 202 EEVEALEAEALAQARAAFERHP-----HDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGV--GLT 274 (443)
T ss_pred chhhHHHHHHHHHHHHHHHhCC-----CcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcc--Ccc
Confidence 0 2345566665321 579999999998865334577799999999999999999999997432 222
Q ss_pred Cchh--HhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHH-H--HHhhCCCcchhHHHHHHHHHHHHHhHH-HHhh
Q 018240 188 GVPV--RRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARR-L--RKTLGGGMRQVGVLCAAALVALQENVL-VMLD 261 (359)
Q Consensus 188 ~~~~--~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~ 261 (359)
|... ..+.-.+|+++ ++|.+ |.+|++.++ ++.+.... + ....+.++..+++.++++...++...+ ...+
T Consensus 275 G~~~a~~~~gv~PDiv~--~gK~l--~~~a~l~~~-~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~ 349 (443)
T PRK08297 275 GTAWAYQQLGVRPDIVA--FGKKT--QVCGIMAGR-RVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEEDGLVE 349 (443)
T ss_pred chHHHHHhcCCCCCEEE--ecccc--cccceecch-HHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhcCHHH
Confidence 3221 12223577775 56876 456666554 33222111 1 112455666677778888888765433 3556
Q ss_pred hHHHHHHHHHHHHhcC----CCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHH
Q 018240 262 GDHKKAKLLAEGLNQL----KGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISAN 337 (359)
Q Consensus 262 ~~~~~~~~l~~~l~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~ 337 (359)
+..++.+++++.|+++ |.+.... ...+.++.+.+... .....+.+.|.++||.+.+.+...+|+.++..++++
T Consensus 350 ~~~~~g~~l~~~L~~l~~~~~~~~~~v-rg~G~~~~i~~~~~--~~~~~~~~~l~~~Gvl~~~~~~~~lr~~P~l~~t~~ 426 (443)
T PRK08297 350 NAARQGEYLLARLEELAAEFPAVVSNV-RGRGLMCAFDLPTT--ADRDEVIRRLWEEGVLVLPCGERSIRFRPALTVTTE 426 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcceee-eccceEEEEEecCH--HHHHHHHHHHHHCCEEEecCCCCeEEEECCccCCHH
Confidence 6777777777777653 3232111 23577777887652 246688899999999998877788999998899999
Q ss_pred HHHHHHHHHHHHHHHH
Q 018240 338 DVHYTLSCFQKIYAGV 353 (359)
Q Consensus 338 ~i~~~~~~l~~~~~~~ 353 (359)
++++++++|+++++++
T Consensus 427 eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 427 EIDAAIDALRRALPEV 442 (443)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998765
No 309
>PRK04311 selenocysteine synthase; Provisional
Probab=99.91 E-value=4.7e-21 Score=170.87 Aligned_cols=316 Identities=18% Similarity=0.187 Sum_probs=204.1
Q ss_pred hHHHHHHHHHcCCCCCC--ccC-----CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCc
Q 018240 16 PTEAMRAAMASAEVDDD--VLM-----HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSH 88 (359)
Q Consensus 16 ~~~~~~~a~~~~~~~~~--~~~-----~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~ 88 (359)
.++++.+++.+...+.. .|. .++....+++.+++++|.+.+++++||+.|+..++.+ + .+|++|++++..|
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~-l-~~GdeVIvs~~e~ 175 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGAEDALVVNNNAAAVLLALNA-L-AAGKEVIVSRGEL 175 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHH-h-CCCCEEEEcchhh
Confidence 34777777766433221 111 1345679999999999999999999999999888855 4 4899999998766
Q ss_pred ceee---ccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC--Cc--eecChhhHHH
Q 018240 89 IHIY---ENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC--GG--RCLSVEYTDS 161 (359)
Q Consensus 89 ~~~~---~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p--tG--~~~~~~~l~~ 161 (359)
+... ..-......|++++.++.. ...+++++++.++ ++|++|+++++.| | +| ...+ +++
T Consensus 176 ~~~ggs~~i~~~~~~~G~~l~~v~~~--~~t~~~dle~aI~--------~~TklV~~vh~sN-~~i~G~~~~~d---l~e 241 (464)
T PRK04311 176 VEIGGAFRIPDVMRQAGARLVEVGTT--NRTHLRDYEQAIN--------ENTALLLKVHTSN-YRIEGFTKEVS---LAE 241 (464)
T ss_pred hhcCcchhhHHHHHHCCcEEEEECCC--CCCCHHHHHHhcC--------ccCeEEEEEcCCC-ccccccCCcCC---HHH
Confidence 5321 1001245678888888643 2357899999998 7899999988766 5 34 3344 899
Q ss_pred HHHHHHHcCcEEEEecccccchhh--------hcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHH--HH
Q 018240 162 VGEIAKKHGLKLHIDGARIFNAAV--------ALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARR--LR 231 (359)
Q Consensus 162 i~~~~~~~~~~li~D~a~~~~~~~--------~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~--~~ 231 (359)
|+++|++||+++++|.++ |... ........+..++|++++|.+|++|+|.+|+++++++++++++. +.
T Consensus 242 I~~lak~~gi~vivD~gs--G~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~~li~~l~~~~~~ 319 (464)
T PRK04311 242 LAALGKEHGLPVVYDLGS--GSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKKELIARLKKHPLK 319 (464)
T ss_pred HHHHHHHcCCeEEEECCC--cccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcHHHHHHHhhchhH
Confidence 999999999999999853 2221 01111222335899999999999999988999999999887652 11
Q ss_pred HhhC-CCcchhHHHHHHHHH--------HHH--HhHHHHhhhHHHHHHHHHHHHhcCC--Cc--eEecC----------C
Q 018240 232 KTLG-GGMRQVGVLCAAALV--------ALQ--ENVLVMLDGDHKKAKLLAEGLNQLK--GL--RVDVD----------A 286 (359)
Q Consensus 232 ~~~~-~~~~~~~~~~~~~~~--------~l~--~~~~~~~~~~~~~~~~l~~~l~~~~--g~--~~~~~----------~ 286 (359)
.... ......+..++.... .++ ..+..+.++..++++.+.+.|++.+ ++ ++... .
T Consensus 320 r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~ 399 (464)
T PRK04311 320 RALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPV 399 (464)
T ss_pred HHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcC
Confidence 1111 011111122211100 000 1122244667788999999998863 33 33321 1
Q ss_pred ccceEEEEEeccchHHHHHHHHHHHHhcCceec-cCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 287 VETNIVYFEITEDSKLYAACLLKKLEEHGVLVM-PESSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~-~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
..-+...+.+.. .+.+..++.+.|++....+. .-..+.+.+-+. .+.++|++.++++|++++.
T Consensus 400 ~~~~~~~v~~~~-~~~~~~~l~~~lr~~~~~i~~r~~~~~~~ld~r-~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 400 DRLPSAAVTLTP-KDRSLEALAARLRLLPPPVIGRIEDGRLLLDLR-TLEEEDEERLAAALLEALN 463 (464)
T ss_pred CCCCeEEEEEeC-CCCCHHHHHHHHhcCCCCEEEEEECCEEEEEeC-cCCHHHHHHHHHHHHHHhh
Confidence 112334455543 23578899999987554332 234555666665 6788999999999988754
No 310
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.91 E-value=4.5e-21 Score=172.54 Aligned_cols=337 Identities=13% Similarity=0.109 Sum_probs=215.7
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC---c-cCCChHHHHHHHHHHHHhC--CCCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD---V-LMHDPTAFRLETEMAKVMG--KEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~---~-~~~~~~~~~l~~~la~~~~--~~~~~~~~~gt~a~~~~l~~ 72 (359)
.++|||.++ +....+|++.+++.+...... . ....+...++.+.+++.++ .+...+++||++|+..+++.
T Consensus 47 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKl 126 (466)
T PRK07030 47 KRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKM 126 (466)
T ss_pred CEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHH
Confidence 357899876 345556888888887554321 1 1235667788888888774 34568899999999999998
Q ss_pred hhhh------c-CCeEEecCC-CcceeeccccccccCCc------------cceeeecCCCC----C--------CCHHH
Q 018240 73 HCET------R-GSEVILGDN-SHIHIYENGGISTIGGV------------HPRTVKNNQDG----T--------MDIDL 120 (359)
Q Consensus 73 ~~~~------~-g~~vl~~~~-~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~----~--------~~~~~ 120 (359)
+... + ..+|+.-.. +|..+.. + ....+. .+..++.+... . -+++.
T Consensus 127 Ar~~~~~~g~t~r~~ii~~~~~yHG~t~g--a-~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~ 203 (466)
T PRK07030 127 SFHYWRNRGKPRKKRFVTLTNSYHGETLA--A-MSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAH 203 (466)
T ss_pred HHHHHHHhCCCCCcEEEEECCCcCcccHH--H-HhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHH
Confidence 8531 2 235665554 4443321 1 111111 12222222111 0 02455
Q ss_pred HHHHhcCCCCCccCCceeEEEEec-cccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCc
Q 018240 121 IEAAIRDPKGEIVYPTTRLICLEN-THANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAA 198 (359)
Q Consensus 121 l~~~l~~~~~~~~~~~~~~v~i~~-~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~ 198 (359)
+++.+++.. .++.+|++++ ...+ +|. ..+.+++++++++|++||+++|+||++..............+.-.+
T Consensus 204 le~~~~~~~-----~~iAAvi~EP~iqg~-gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~P 277 (466)
T PRK07030 204 MEQTLAEHH-----DEIAAVIVEPLIQGA-GGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRP 277 (466)
T ss_pred HHHHHHhCC-----CceEEEEEecccccC-CCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCC
Confidence 677776321 5799999998 4664 455 5667999999999999999999999974322221111112222356
Q ss_pred cEEEEeccccCCCce--eeEEecCHHHHHHHHHH-----HHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHH
Q 018240 199 DSASVCLSKGLGAPV--GSVIVGSKEFIKKARRL-----RKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLL 270 (359)
Q Consensus 199 d~~~~s~~K~~g~~~--gg~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l 270 (359)
|++++ +|.++++. -|.+++++++.+.+..- ....+.++..+++.++++...++...+ +..++..++.++|
T Consensus 278 Div~~--gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l 355 (466)
T PRK07030 278 DFLCL--SKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRM 355 (466)
T ss_pred CEEee--ehhccCCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 77765 58775432 25577788888776421 113456666678888888888876544 3556777778888
Q ss_pred HHHHhcC---CCceEecCCccceEEEEEeccch---------HHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHH
Q 018240 271 AEGLNQL---KGLRVDVDAVETNIVYFEITEDS---------KLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISAND 338 (359)
Q Consensus 271 ~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~ 338 (359)
++.|+++ |.+.-. ...+.++.+.+..+. ......+.+.+.++|+.+.+.+ ..+|+.++..++++|
T Consensus 356 ~~~L~~l~~~~~v~~v--rG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-~~i~~~Ppl~it~~e 432 (466)
T PRK07030 356 AEATAHLADHPHVAEV--RQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPLG-SVVYFLPPYVITPEQ 432 (466)
T ss_pred HHHHHHHhcCCCEEEe--EeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEecC-CEEEEECCccCCHHH
Confidence 8887765 222211 335666666663210 0123568888899999997754 589999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 018240 339 VHYTLSCFQKIYAGV 353 (359)
Q Consensus 339 i~~~~~~l~~~~~~~ 353 (359)
+++++++++++++++
T Consensus 433 id~~~~~l~~al~~~ 447 (466)
T PRK07030 433 IDFLAEVASEGIDIA 447 (466)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999987
No 311
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.91 E-value=7e-21 Score=170.67 Aligned_cols=337 Identities=18% Similarity=0.184 Sum_probs=211.6
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCC----CccCCChHHHHHHHHHHHHhC--CCCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDD----DVLMHDPTAFRLETEMAKVMG--KEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~~--~~~~~~~~~gt~a~~~~l~~ 72 (359)
.++|||.++ +....+|++.+++.+..... ......+...++.+.+++.++ .+.+.+++||++|+..+++.
T Consensus 49 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Alkl 128 (445)
T PRK09221 49 RKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDTALKI 128 (445)
T ss_pred CEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHH
Confidence 367899876 33445588888887654331 111235667788888888874 35678999999999999998
Q ss_pred hhhh------c-CCeEEecCC-CcceeeccccccccCCc------------cceeeecCC---C--CCC--------CHH
Q 018240 73 HCET------R-GSEVILGDN-SHIHIYENGGISTIGGV------------HPRTVKNNQ---D--GTM--------DID 119 (359)
Q Consensus 73 ~~~~------~-g~~vl~~~~-~~~~~~~~~~~~~~~g~------------~~~~v~~~~---~--~~~--------~~~ 119 (359)
+... + ..+|+.... +|+.+.. + ....+. .+..++.+. . +.. ..+
T Consensus 129 Ar~~~~~~g~~~r~~ii~~~~~yHG~t~g--a-ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (445)
T PRK09221 129 ALAYHRARGQGTRTRLIGRERGYHGVGFG--G-ISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELAD 205 (445)
T ss_pred HHHHHHhcCCCCCcEEEEECCCcCccchh--h-hccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHH
Confidence 7642 1 235665444 4443321 1 111110 112222211 0 000 135
Q ss_pred HHHHHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhc
Q 018240 120 LIEAAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQ 196 (359)
Q Consensus 120 ~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~ 196 (359)
++++.+++.. ..++.+|++++...+ +|. ..+.+++++++++|++||+++|+||++... +..|.. ...+..
T Consensus 206 ~l~~~i~~~~----~~~iAavi~Epv~g~-~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~--GRtG~~~~~~~~gv 278 (445)
T PRK09221 206 DLERLVALHD----ASTIAAVIVEPMAGS-AGVLVPPKGYLQRLREICDKHGILLIFDEVITGF--GRLGAAFAAERFGV 278 (445)
T ss_pred HHHHHHHhcC----CCcEEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCC--CcCchhhHHHhcCC
Confidence 6777775321 147889999998874 566 456799999999999999999999997421 112222 112222
Q ss_pred CccEEEEeccccCCC---ceeeEEecCHHHHHHHHHHH-----HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHH
Q 018240 197 AADSASVCLSKGLGA---PVGSVIVGSKEFIKKARRLR-----KTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKA 267 (359)
Q Consensus 197 ~~d~~~~s~~K~~g~---~~gg~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~ 267 (359)
.+|++ +++|.+++ |.|+ +++++++.+.+..-. ...+.++..+++.++++...++...+ ...++..++.
T Consensus 279 ~PDi~--~~gK~l~gG~~Pi~a-v~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g 355 (445)
T PRK09221 279 TPDII--TFAKGLTNGAIPMGA-VIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFERAAELA 355 (445)
T ss_pred CCCEE--EeccccccCccccee-eEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 45755 55677743 4445 677888877764210 12345566677777788877765533 3566777888
Q ss_pred HHHHHHHhcCCCce-EecCCccceEEEEEeccc---hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHH
Q 018240 268 KLLAEGLNQLKGLR-VDVDAVETNIVYFEITED---SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTL 343 (359)
Q Consensus 268 ~~l~~~l~~~~g~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~ 343 (359)
++|++.|+++.+.. +..-...+.+..+.+... ....+..+.+.|.++||.+.+.+ ..+|++++..++++++++++
T Consensus 356 ~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~-~~lr~~Ppl~~t~~eid~~~ 434 (445)
T PRK09221 356 PYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYTG-DTIALSPPLIIEKAQIDELV 434 (445)
T ss_pred HHHHHHHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeecC-CEEEEECCccCCHHHHHHHH
Confidence 88888887763222 111122344444444321 11234678888999999986654 68999999999999999999
Q ss_pred HHHHHHHHHH
Q 018240 344 SCFQKIYAGV 353 (359)
Q Consensus 344 ~~l~~~~~~~ 353 (359)
++|+++++++
T Consensus 435 ~~l~~~l~~~ 444 (445)
T PRK09221 435 DALGDALRAV 444 (445)
T ss_pred HHHHHHHHhh
Confidence 9999999765
No 312
>PRK07480 putative aminotransferase; Validated
Probab=99.91 E-value=3.9e-21 Score=172.70 Aligned_cols=340 Identities=16% Similarity=0.103 Sum_probs=213.0
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC----cc-CCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD----VL-MHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~----~~-~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~ 71 (359)
.++|||.++ +....+|.+.+++.+...... .+ ..++...++.+.+++.++. +.+.+++||++|+..+++
T Consensus 50 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~Alk 129 (456)
T PRK07480 50 NKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLR 129 (456)
T ss_pred CEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHH
Confidence 357899876 344555888888877554321 11 2467778899999998853 467899999999999999
Q ss_pred Hhhhh------cC-CeEEecC-CCcceeeccccccccCCcc------------ceeeecCCCC----CCC--------HH
Q 018240 72 VHCET------RG-SEVILGD-NSHIHIYENGGISTIGGVH------------PRTVKNNQDG----TMD--------ID 119 (359)
Q Consensus 72 ~~~~~------~g-~~vl~~~-~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~----~~~--------~~ 119 (359)
.+..- ++ .+|+... .+|..+.. + ....+.. +..++.+..+ ..+ .+
T Consensus 130 lAr~~~~~~g~~~r~~ii~~~~~yHG~tl~--a-~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 206 (456)
T PRK07480 130 MVRHYWALKGKPQKKVIISRKNGYHGSTVA--G-ASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAAR 206 (456)
T ss_pred HHHHHHHhcCCCCCcEEEEECCCcCCcchh--h-hhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHH
Confidence 88642 22 3455444 45554332 1 1111111 1112211100 011 24
Q ss_pred HHHHHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhc
Q 018240 120 LIEAAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQ 196 (359)
Q Consensus 120 ~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~ 196 (359)
.+++.+.+. ...++.+|++++...+ .|. ..|.+++++++++|++||+++|+||++..... .|.. ...+..
T Consensus 207 ~l~~~~~~~----~~~~vAAvi~EPiqg~-gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGR--tG~~~a~~~~gv 279 (456)
T PRK07480 207 QLEAKILEL----GADNVAAFIGEPIQGA-GGVIIPPATYWPEIQRICRKYDILLVADEVICGFGR--TGEWFGSQHFGI 279 (456)
T ss_pred HHHHHHHhc----CCCcEEEEEEccccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc--CcchhhhhhcCC
Confidence 555545321 1157899999998885 455 56779999999999999999999999743222 2221 122223
Q ss_pred CccEEEEeccccCCC---ceeeEEecCHHHHHHHHH-HH-HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhH-HHHHHH
Q 018240 197 AADSASVCLSKGLGA---PVGSVIVGSKEFIKKARR-LR-KTLGGGMRQVGVLCAAALVALQENVL-VMLDGD-HKKAKL 269 (359)
Q Consensus 197 ~~d~~~~s~~K~~g~---~~gg~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~-~~~~~~ 269 (359)
.+|++ +++|.+++ |.++ +++++++.+.+.. .. ...++++..+++.++++...++...+ ...++. .++.++
T Consensus 280 ~PDiv--~~gK~l~gG~~Pi~a-v~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~ 356 (456)
T PRK07480 280 KPDLM--TIAKGLTSGYIPMGA-VGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPY 356 (456)
T ss_pred CCCee--eeehhhccCCccceE-EEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 56665 55688854 4455 5567788777531 11 13456777788888999988876544 244555 366677
Q ss_pred HHHHHhcCCCceEe-cCCccceEEEEEeccchH---------HHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHH
Q 018240 270 LAEGLNQLKGLRVD-VDAVETNIVYFEITEDSK---------LYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDV 339 (359)
Q Consensus 270 l~~~l~~~~g~~~~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i 339 (359)
|.+.|+++....+. .-...+.++.+.+..+.. .....+.+.+.++||.+.+.+ ..+|+.++..++++++
T Consensus 357 l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~-~~l~~~Ppl~it~~ei 435 (456)
T PRK07480 357 LQKRLRELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAVG-DRMIISPPLVITHAEI 435 (456)
T ss_pred HHHHHHHhhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeecC-CEEEEECCCCCCHHHH
Confidence 77777654221110 112356666666632100 113467778889999997643 6899999888999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 018240 340 HYTLSCFQKIYAGVCEE 356 (359)
Q Consensus 340 ~~~~~~l~~~~~~~~~~ 356 (359)
++++++|+++++++.++
T Consensus 436 d~~~~~l~~al~~~~~~ 452 (456)
T PRK07480 436 DELVEKARKALDATAAE 452 (456)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988654
No 313
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.91 E-value=1.8e-21 Score=164.84 Aligned_cols=284 Identities=18% Similarity=0.156 Sum_probs=209.4
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.|....++..++++.|.+.+++++||..|...++..++ ..|++|++....|..+.... .+....|++...++.+
T Consensus 76 nPt~~~le~~iaal~ga~~~l~fsSGmaA~~~al~~L~-~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~---- 150 (409)
T KOG0053|consen 76 NPTRDVLESGIAALEGAAHALLFSSGMAAITVALLHLL-PAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD---- 150 (409)
T ss_pred CCchHHHHHHHHHHhCCceEEEecccHHHHHHHHHHhc-CCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh----
Confidence 57789999999999999999999999999999999999 49999999988887765311 1233567777777655
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
+++.+++.++ +++++||+++|.| |+..+.+ +++++++|+++|+++|||++ ++.. ....++.
T Consensus 151 -~~~~~~~~i~--------~~t~~V~~ESPsN-Pll~v~D---I~~l~~la~~~g~~vvVDnT--f~~p----~~~~pL~ 211 (409)
T KOG0053|consen 151 -DLKKILKAIK--------ENTKAVFLESPSN-PLLKVPD---IEKLARLAHKYGFLVVVDNT--FGSP----YNQDPLP 211 (409)
T ss_pred -hHHHHHHhhc--------cCceEEEEECCCC-Ccccccc---HHHHHHHHhhCCCEEEEeCC--cCcc----cccChhh
Confidence 7888888888 7899999998777 9988876 89999999999999999998 4332 2344444
Q ss_pred cCccEEEEeccccCCCc---eeeEEecC-HHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHH
Q 018240 196 QAADSASVCLSKGLGAP---VGSVIVGS-KEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLA 271 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~---~gg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 271 (359)
-++|+++.|.+|++++- .+|.++.+ +++.++++......|++. ++..+......++..-- ++++..+++..+.
T Consensus 212 lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~--~p~~~~ll~Rglktl~l-Ri~~~~ena~~~A 288 (409)
T KOG0053|consen 212 LGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCE--DPFDLFLLSRGLKTLHL-RINKHSENALKIA 288 (409)
T ss_pred cCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCC--CHHHHHHHhcCcchhhh-hHHHHHHHHHHHH
Confidence 48999999999999873 55777775 899999988888888776 56666666666665433 6777888888888
Q ss_pred HHHhcCCCce-EecC----------------CccceEEEEEeccchHHHHHHHHHHHHhc--Ccee--------ccC---
Q 018240 272 EGLNQLKGLR-VDVD----------------AVETNIVYFEITEDSKLYAACLLKKLEEH--GVLV--------MPE--- 321 (359)
Q Consensus 272 ~~l~~~~g~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gi~~--------~~~--- 321 (359)
+.|++.|.++ +..| ...+...++.... ...+.+|.+.|+-. +... .|.
T Consensus 289 ~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~--~~~a~kf~~~LK~~~~a~SlG~~eSL~~~p~~mt 366 (409)
T KOG0053|consen 289 LLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGN--EEHAKKFYDALKLFTKAPSLGGNESLAEPPAIMT 366 (409)
T ss_pred HHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCC--HHHHHHHHHhhhhhhcccCcCccchhhcchhhhc
Confidence 8888876554 2222 1223333333332 23566677777432 2221 000
Q ss_pred -------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 322 -------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 322 -------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.++-+|+|+. -|+++.++..+.++++.+
T Consensus 367 h~~~~e~~~~~Gi~~~LVRvSVG----iEd~~dL~~d~~~Al~~~ 407 (409)
T KOG0053|consen 367 HASELEEREKFGIDPNLVRVSVG----IEDIEDLIKDFQQALEKA 407 (409)
T ss_pred cCCCHHHHHhcCCCCCcEEEEec----cCCHHHHHHHHHHHHHhh
Confidence 3456999994 478888888888888765
No 314
>PRK15029 arginine decarboxylase; Provisional
Probab=99.91 E-value=8.7e-22 Score=182.67 Aligned_cols=310 Identities=16% Similarity=0.117 Sum_probs=206.9
Q ss_pred CCccCCChHHHHHHHHHHHHhCCCCeEEcCCchH-HHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeee
Q 018240 31 DDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTM-GNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVK 109 (359)
Q Consensus 31 ~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~-a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~ 109 (359)
++.+.+.....+.++..|+.||.+...+++|||+ ++.+++.+++ ++||+|++++.+|.|.+. + ..+.|++++++.
T Consensus 198 D~L~~p~G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~-~~gd~Vlv~RN~HKSv~~-a--l~L~ga~Pvyl~ 273 (755)
T PRK15029 198 GSLLDHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACM-TDNDVVVVDRNCHKSIEQ-G--LILTGAKPVYMV 273 (755)
T ss_pred CCCCCCCcHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhc-CCCCEEEeecccHHHHHH-H--HHHcCCeEEEec
Confidence 3345566778999999999999999988888876 4555555566 699999999999999997 5 888999999984
Q ss_pred cCC-C----CCCC-----HHHHHHHhcCCCCCc--cCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018240 110 NNQ-D----GTMD-----IDLIEAAIRDPKGEI--VYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 110 ~~~-~----~~~~-----~~~l~~~l~~~~~~~--~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
... . +.++ ++.++++++++++.. ...+++++++.+|. ..|++++ +++|+++|+++|++|++||
T Consensus 274 P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PT--Y~Gv~~d---i~~I~~~~h~~~~~llvDE 348 (755)
T PRK15029 274 PSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCT--YDGVCYN---AKEAQDLLEKTSDRLHFDE 348 (755)
T ss_pred ccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCC--CcceeeC---HHHHHHHHHhcCCeEEEEC
Confidence 332 1 3445 899999998764422 12345578884544 4699987 8999999999999999999
Q ss_pred ccccchhhhcCchh-Hhh-----h-cCcc-EEEEeccccCCCcee-eEEecCHH--HH--HHHHHHHHhhCCCcchhHHH
Q 018240 178 ARIFNAAVALGVPV-RRL-----V-QAAD-SASVCLSKGLGAPVG-SVIVGSKE--FI--KKARRLRKTLGGGMRQVGVL 244 (359)
Q Consensus 178 a~~~~~~~~~~~~~-~~~-----~-~~~d-~~~~s~~K~~g~~~g-g~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~ 244 (359)
||+....+....+. ..+ . .++| +++.|.||++++... +++-.+.. .+ ++++..-..+. ++|++..+
T Consensus 349 AhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l~~~q-STSPSY~L 427 (755)
T PRK15029 349 AWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHA-TTSPLYAI 427 (755)
T ss_pred ccccccccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHHHHHc-CCCcHHHH
Confidence 97544332221111 222 2 4788 777799999977655 55554322 12 23333322222 34445555
Q ss_pred HHHHHHHH---HH-hHHHHhhhHHHHHHHHHHHHhcCCC-----------------------------------------
Q 018240 245 CAAALVAL---QE-NVLVMLDGDHKKAKLLAEGLNQLKG----------------------------------------- 279 (359)
Q Consensus 245 ~~~~~~~l---~~-~~~~~~~~~~~~~~~l~~~l~~~~g----------------------------------------- 279 (359)
.+....+- +. .-+...++..+.+..+++.+.++++
T Consensus 428 mASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 507 (755)
T PRK15029 428 CASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQ 507 (755)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhhhcccc
Confidence 55544333 21 1223566677777888888876644
Q ss_pred -ceEecC--Cc-------------cceEEEEEeccchHHH---------HHHHHHHHHhcCceeccCCCcEEEEEeCCCC
Q 018240 280 -LRVDVD--AV-------------ETNIVYFEITEDSKLY---------AACLLKKLEEHGVLVMPESSTRVRIVVHHQI 334 (359)
Q Consensus 280 -~~~~~~--~~-------------~~~~~~~~~~~~~~~~---------~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~ 334 (359)
+.+..+ .. ...-+.+.++. .+.+ +..+.+.|+++||.+...+...+-+-++.+.
T Consensus 508 ~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~-~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~~~~vL~l~s~g~ 586 (755)
T PRK15029 508 DCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPG-MGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLFSMGV 586 (755)
T ss_pred ceeeecccccccCcccccccccccCCceEEEEcCC-CCCCCcccccCCcHHHHHHHHHHcCCEEEecCCCeEEEEeCCCC
Confidence 111111 00 01113333322 1223 4489999999999998888888888888899
Q ss_pred CHHHHHHHHHHHHHHHH
Q 018240 335 SANDVHYTLSCFQKIYA 351 (359)
Q Consensus 335 ~~~~i~~~~~~l~~~~~ 351 (359)
+++++++++++|.++-+
T Consensus 587 t~~~~~~L~~aL~~~~~ 603 (755)
T PRK15029 587 TRGKWGTLVNTLCSFKR 603 (755)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999999999988754
No 315
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.91 E-value=3.4e-21 Score=172.11 Aligned_cols=336 Identities=14% Similarity=0.066 Sum_probs=215.9
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC----ccCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD----VLMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~----~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~ 72 (359)
.+++||.++ +....+|++.+++.+...... .....+...++.+.+++.++. +.+.+++||++|+..+++.
T Consensus 45 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~Alkl 124 (427)
T TIGR00508 45 RRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKM 124 (427)
T ss_pred CEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHH
Confidence 467899886 444555888888887544321 112356667888888888754 3568999999999999998
Q ss_pred hhhh------c-CCeEEecCCCcceeeccccccccCCcc-------------ceeeecCCC-C-----CCCHHHHHHHhc
Q 018240 73 HCET------R-GSEVILGDNSHIHIYENGGISTIGGVH-------------PRTVKNNQD-G-----TMDIDLIEAAIR 126 (359)
Q Consensus 73 ~~~~------~-g~~vl~~~~~~~~~~~~~~~~~~~g~~-------------~~~v~~~~~-~-----~~~~~~l~~~l~ 126 (359)
++.. + ..+|+..+.+|..... +. ..+.+.. ...++.+.. . .-|++++++.++
T Consensus 125 Ar~~~~~~~~~~r~~il~~~~~yHG~t~-~~-~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~ 202 (427)
T TIGR00508 125 ALQYWQAKGEKNRQKFLTIRSGYHGDTF-GA-MSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLME 202 (427)
T ss_pred HHHHHHhhCCCCccEEEEEcCCcCCccH-hh-hcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHH
Confidence 7742 1 2456655554433221 11 1111110 111111111 1 014567777776
Q ss_pred CCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEE
Q 018240 127 DPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASV 203 (359)
Q Consensus 127 ~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~ 203 (359)
+.. .++++|++++.....+|. ..+.+++++|+++|++||+++|+||+| .| ++..|.. ...+...+|+++
T Consensus 203 ~~~-----~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG-~Gr~G~~~~~~~~~v~pDi~~- 274 (427)
T TIGR00508 203 LHS-----DEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA-TG-FGRTGKLFACEHAGVVPDILC- 274 (427)
T ss_pred hcC-----CcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cC-CCcCCccchhhhcCCCCCEEE-
Confidence 421 468899999863334455 456799999999999999999999998 33 2333332 112223567665
Q ss_pred eccccCCCce--eeEEecCHHHHHHHHHHH---HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC
Q 018240 204 CLSKGLGAPV--GSVIVGSKEFIKKARRLR---KTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL 277 (359)
Q Consensus 204 s~~K~~g~~~--gg~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~ 277 (359)
++|.+++.. .+.++.++++.+.++... ...+.++..++..++++..+++...+ +..++..++.++|++.|+++
T Consensus 275 -~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l 353 (427)
T TIGR00508 275 -VGKALTGGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGEWQKQVSAIENQLKRELSPL 353 (427)
T ss_pred -echhhhcCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Confidence 689885432 366778888888765321 12344555567778888888864432 35667778888888888876
Q ss_pred CCce-EecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 278 KGLR-VDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 278 ~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.... +..-...+.++.+.+..+ .....+.+.|.++||.+.+.+ ..+|++++..++++|++++++++++++.+
T Consensus 354 ~~~~~i~~vrg~G~~~~i~~~~~--~~~~~~~~~l~~~Gv~~~~~~-~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 354 RKNPVVKDVRVLGAIGVVEMYKP--VNVEELQKKFVEQGVWIRPFG-KLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred hcCCCEEeEeccccEEEEEECCc--cCHHHHHHHHHHCCeEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 2111 111123466666776542 246788999999999997654 57999998899999999999999998854
No 316
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.91 E-value=5.6e-21 Score=171.18 Aligned_cols=338 Identities=17% Similarity=0.159 Sum_probs=212.3
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC---cc-CCChHHHHHHHHHHHHhC--CCCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD---VL-MHDPTAFRLETEMAKVMG--KEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~---~~-~~~~~~~~l~~~la~~~~--~~~~~~~~~gt~a~~~~l~~ 72 (359)
.++|||.++ +....+|.+.+++.+...... .+ ..++...++.+.+++.+. .+.+.+++||++|+..+++.
T Consensus 46 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alkl 125 (442)
T PRK13360 46 RRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDTALKI 125 (442)
T ss_pred CEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHH
Confidence 357899876 334555888888877543211 11 235667788888988874 45678999999999999998
Q ss_pred hhhh------c-CCeEEecCCC-cceeeccccccccCC------------ccceeeecCCC-----CCC--------CHH
Q 018240 73 HCET------R-GSEVILGDNS-HIHIYENGGISTIGG------------VHPRTVKNNQD-----GTM--------DID 119 (359)
Q Consensus 73 ~~~~------~-g~~vl~~~~~-~~~~~~~~~~~~~~g------------~~~~~v~~~~~-----~~~--------~~~ 119 (359)
+... + ..+|+....+ |+.+.- + ....| ..+..++.+.+ +.. ..+
T Consensus 126 Ar~~~~~~g~~~r~~ii~~~~~yHG~t~g--a-ls~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 202 (442)
T PRK13360 126 ALAYHRARGEGSRTRLIGRERGYHGVGFG--G-ISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELAD 202 (442)
T ss_pred HHHHHHhcCCCCCcEEEEEcCCcCCccHh--h-hhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHH
Confidence 7742 1 2456655544 443321 1 11111 01122222211 000 145
Q ss_pred HHHHHhcCCCCCccCCceeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccc-cchhhhcCchhHhhhcC
Q 018240 120 LIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARI-FNAAVALGVPVRRLVQA 197 (359)
Q Consensus 120 ~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~-~~~~~~~~~~~~~~~~~ 197 (359)
.+++.++... ..++.+|++++...+ .|.. .+.+++++|+++|++||+++|+||+|. +|-.+.. .......-.
T Consensus 203 ~le~~l~~~~----~~~~aavivEpi~g~-~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~-~a~~~~gv~ 276 (442)
T PRK13360 203 ELERLVTLHD----ASTIAAVIVEPVAGS-TGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAP-FAAQYFGVT 276 (442)
T ss_pred HHHHHHHhcC----CCcEEEEEEccccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccc-hhhhhcCCC
Confidence 6777775311 147889999998884 4554 667999999999999999999999983 4322211 111112224
Q ss_pred ccEEEEeccccCCC---ceeeEEecCHHHHHHHHHHH-----HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHH
Q 018240 198 ADSASVCLSKGLGA---PVGSVIVGSKEFIKKARRLR-----KTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAK 268 (359)
Q Consensus 198 ~d~~~~s~~K~~g~---~~gg~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~ 268 (359)
+|++ +++|.+++ |.|+ ++.++++.+.+..-. ...+.++..+++.++++..+++...+ ...++..++.+
T Consensus 277 PDiv--t~gK~l~gG~~P~ga-v~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~ 353 (442)
T PRK13360 277 PDLL--TCAKGLTNGAIPMGA-VFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLTRAARLAP 353 (442)
T ss_pred Ccee--eeeeccccCccceEE-EEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 6655 66798853 5556 566878877754211 12345566677788888888865543 35566777888
Q ss_pred HHHHHHhcCCCceEec-CCccceEEEEEeccc---hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHH
Q 018240 269 LLAEGLNQLKGLRVDV-DAVETNIVYFEITED---SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLS 344 (359)
Q Consensus 269 ~l~~~l~~~~g~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~ 344 (359)
++++.|+++....... -...+.+..+.+... ....+.++.+.|.++||.+.+.+ ..+|++++..+++++++++++
T Consensus 354 ~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~-~~lr~~Ppl~~t~~eid~~~~ 432 (442)
T PRK13360 354 YWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYTG-DILALSPPLIIEEAQIDELFD 432 (442)
T ss_pred HHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEecC-CEEEEeCCCccCHHHHHHHHH
Confidence 8888887652221111 122333333443221 11245678888889999997654 689999999999999999999
Q ss_pred HHHHHHHHH
Q 018240 345 CFQKIYAGV 353 (359)
Q Consensus 345 ~l~~~~~~~ 353 (359)
+|+++++++
T Consensus 433 ~l~~~l~~~ 441 (442)
T PRK13360 433 ILAQALKET 441 (442)
T ss_pred HHHHHHHHh
Confidence 999998764
No 317
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.91 E-value=1.1e-21 Score=169.37 Aligned_cols=339 Identities=19% Similarity=0.152 Sum_probs=226.8
Q ss_pred ccccccCC----CCCChHHHHHHHHHcCCCCCCc-----cCCChHHHHHHHHHHHHhC---CCCeEEcCCchHHHHHHHH
Q 018240 4 RTVDLRSD----TVTKPTEAMRAAMASAEVDDDV-----LMHDPTAFRLETEMAKVMG---KEAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 4 ~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~-----~~~~~~~~~l~~~la~~~~---~~~~~~~~~gt~a~~~~l~ 71 (359)
++||=.|+ +...-+|++.+++.+....... +...| ..+|.+.|+++.+ .+.++++.|||+|+..+++
T Consensus 45 r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlK 123 (449)
T COG0161 45 RYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALK 123 (449)
T ss_pred EEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHH
Confidence 34454443 4455568888888875543222 22344 8899999999998 5567899999999999999
Q ss_pred Hhhh------hcCC-eEE-ecCCCcceeeccccccccCCc-------------cceeeecCC------CCCC------CH
Q 018240 72 VHCE------TRGS-EVI-LGDNSHIHIYENGGISTIGGV-------------HPRTVKNNQ------DGTM------DI 118 (359)
Q Consensus 72 ~~~~------~~g~-~vl-~~~~~~~~~~~~~~~~~~~g~-------------~~~~v~~~~------~~~~------~~ 118 (359)
.+.. ++.. +++ ..+.+|..++- + ....|. .+..++.+. ++.- ..
T Consensus 124 ma~qY~~~~G~p~r~~~Isr~~gYHG~T~g-a--~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a 200 (449)
T COG0161 124 MALQYWRARGQPQRKKFISRRNGYHGDTLG-A--MSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAA 200 (449)
T ss_pred HHHHHHHhcCCCcceEEEEeccCcCcccch-h--eeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHH
Confidence 9854 3333 244 55666666653 1 222221 111222111 1111 25
Q ss_pred HHHHHHhcCCCCCccCCceeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhc-
Q 018240 119 DLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQ- 196 (359)
Q Consensus 119 ~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~- 196 (359)
++|++.+.++. -+++.++++++...-.+|+. +|..++++++++|++||+++|.||+ .-+++..|..+..-..
T Consensus 201 ~~le~~i~~~g----~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV--~tGFGRTG~~FA~e~~g 274 (449)
T COG0161 201 DELEALILEHG----PETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEV--ATGFGRTGKMFACEHAG 274 (449)
T ss_pred HHHHHHHHhcC----cccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecc--eeCCCcCchhhhhhhcC
Confidence 66777777532 15788999999998547875 5569999999999999999999998 4444444544433322
Q ss_pred -CccEEEEeccccCCCcee--eEEecCHHHHHHHHHH---HHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHH
Q 018240 197 -AADSASVCLSKGLGAPVG--SVIVGSKEFIKKARRL---RKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKL 269 (359)
Q Consensus 197 -~~d~~~~s~~K~~g~~~g--g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~ 269 (359)
.+|++ +++|.+.+..- |.++.++++.+.+..- .-..|.+++..++.+++++..++-..+ ..+++..+...+
T Consensus 275 i~PDi~--~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~ 352 (449)
T COG0161 275 IVPDIL--CLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAY 352 (449)
T ss_pred CCCCee--eecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 44544 66688744222 4466677777776532 224678888889999999999976653 466777788888
Q ss_pred HHHHHhc-CCCceEec-CCccceEEEEEeccchH-------HHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHH
Q 018240 270 LAEGLNQ-LKGLRVDV-DAVETNIVYFEITEDSK-------LYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVH 340 (359)
Q Consensus 270 l~~~l~~-~~g~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~ 340 (359)
|.+.|++ +++...+. -+..+.+.-+.+..+.. .-...+.+.+.++|+.++|. ...+-+++.+.+++++++
T Consensus 353 l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~-g~~i~~~PPliit~~eid 431 (449)
T COG0161 353 LQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL-GDVIYLMPPLIITREEID 431 (449)
T ss_pred HHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec-CCEEEEcCCccCCHHHHH
Confidence 8888887 43222111 13456665666654311 12567888889999999998 458888888899999999
Q ss_pred HHHHHHHHHHHHHHh
Q 018240 341 YTLSCFQKIYAGVCE 355 (359)
Q Consensus 341 ~~~~~l~~~~~~~~~ 355 (359)
++++++.+.+++...
T Consensus 432 ~l~~~l~~al~~~~~ 446 (449)
T COG0161 432 ELVDALREALDETLA 446 (449)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998764
No 318
>PRK07483 hypothetical protein; Provisional
Probab=99.91 E-value=1.1e-20 Score=169.31 Aligned_cols=342 Identities=17% Similarity=0.116 Sum_probs=215.0
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC----ccCCChHHHHHHHHHHHHhC--CCCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD----VLMHDPTAFRLETEMAKVMG--KEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~----~~~~~~~~~~l~~~la~~~~--~~~~~~~~~gt~a~~~~l~~ 72 (359)
.++|||.++ +....+|.+.+++.+...... ....++...++.+.+++.++ .+...+++||++|+..+++.
T Consensus 30 ~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~Alkl 109 (443)
T PRK07483 30 KRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKL 109 (443)
T ss_pred CEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHHHHHH
Confidence 467999886 344556888888887654321 11235667788888888874 35678999999999999998
Q ss_pred hhhh------cC-CeEEe-cCCCcceeeccccccccCCc------------cceeeecCCCCC-C----C--------HH
Q 018240 73 HCET------RG-SEVIL-GDNSHIHIYENGGISTIGGV------------HPRTVKNNQDGT-M----D--------ID 119 (359)
Q Consensus 73 ~~~~------~g-~~vl~-~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~-~----~--------~~ 119 (359)
+..- ++ .+|+. ...+|..+.. + ....+. .+..++....++ . + ++
T Consensus 110 Ar~~~~~~g~~~r~~Ii~~~~~YHG~t~~--a-~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (443)
T PRK07483 110 ARQYFVEIGQPQRRHFIARRQSYHGNTLG--A-LAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLAD 186 (443)
T ss_pred HHHHHHhcCCCCCcEEEEECCCcCCcCHH--H-hhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHH
Confidence 8742 23 35665 4445544332 1 111110 112222111111 0 0 24
Q ss_pred HHHHHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH--hhhc
Q 018240 120 LIEAAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR--RLVQ 196 (359)
Q Consensus 120 ~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~ 196 (359)
++++.+... +.+++.+|++++......|. ..+.+++++++++|++||+++|+||++..... .|.... .+..
T Consensus 187 ~l~~~~~~~----~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGR--tG~~~a~~~~gv 260 (443)
T PRK07483 187 ELEAKILEL----GPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGR--TGTLFACEEDGV 260 (443)
T ss_pred HHHHHHHhc----CCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCccc--CcHHHHHhhcCC
Confidence 566655421 11578999999987532354 56679999999999999999999999753222 232211 2223
Q ss_pred CccEEEEeccccCCCce--eeEEecCHHHHHHHHHHH--HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHH
Q 018240 197 AADSASVCLSKGLGAPV--GSVIVGSKEFIKKARRLR--KTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLA 271 (359)
Q Consensus 197 ~~d~~~~s~~K~~g~~~--gg~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~ 271 (359)
.+|++++ +|.++++. -|.++.++++.+.+.... ...++++..+++.++++...++...+ ...++..++.++|+
T Consensus 261 ~PDiv~~--gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~ 338 (443)
T PRK07483 261 APDLVTI--AKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLR 338 (443)
T ss_pred CCCeeee--hhhhccCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 5676655 68875432 255667888877764211 12456666678888888888865543 35566777777777
Q ss_pred HHHhcC-CCce-EecCCccceEEEEEeccch---------HHHHHHHHHHHHhcCceeccCC-------CcEEEEEeCCC
Q 018240 272 EGLNQL-KGLR-VDVDAVETNIVYFEITEDS---------KLYAACLLKKLEEHGVLVMPES-------STRVRIVVHHQ 333 (359)
Q Consensus 272 ~~l~~~-~g~~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~gi~~~~~~-------~~~lRi~~~~~ 333 (359)
+.|+++ .... +..-...+.++.+.+..+. ......+.+.+.++|+.+.+.+ .+.+|+.++..
T Consensus 339 ~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~ 418 (443)
T PRK07483 339 ARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFI 418 (443)
T ss_pred HHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCC
Confidence 777652 1111 1111345555555553210 0124578888899999996543 36899999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHh
Q 018240 334 ISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 334 ~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
++++++++++++|+++++++..
T Consensus 419 it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 419 ITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred CCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999987654
No 319
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.91 E-value=1.5e-21 Score=155.78 Aligned_cols=300 Identities=16% Similarity=0.191 Sum_probs=186.3
Q ss_pred ccCCChHHHHHHHHHHHH----hCCC---CeEEcCCchHHHHHHHHHhhhh---cC--CeEEec-CCCcceeeccccccc
Q 018240 33 VLMHDPTAFRLETEMAKV----MGKE---AGLFVPSGTMGNLISVLVHCET---RG--SEVILG-DNSHIHIYENGGIST 99 (359)
Q Consensus 33 ~~~~~~~~~~l~~~la~~----~~~~---~~~~~~~gt~a~~~~l~~~~~~---~g--~~vl~~-~~~~~~~~~~~~~~~ 99 (359)
.|+..++...+-+.+++. +|+. ..+..++|++..+.-+..++.. .| .+|++| .|.|..+-. +.
T Consensus 69 nY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d----~~ 144 (417)
T COG3977 69 NYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYAD----AG 144 (417)
T ss_pred cCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccc----cc
Confidence 366666666665555554 4543 3489999999888888777642 12 245544 444433322 22
Q ss_pred cCCccceeeecC--------CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCc
Q 018240 100 IGGVHPRTVKNN--------QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGL 171 (359)
Q Consensus 100 ~~g~~~~~v~~~--------~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~ 171 (359)
+-+--.+.+..+ -.+.+|.++|. +. +.+.+|+++- +.||||.+.+.+++.++-.++++||+
T Consensus 145 l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~--------e~~g~ic~SR-PtNPTGNVlTdeE~~kldalA~~~gi 213 (417)
T COG3977 145 LEEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IG--------ESTGAICVSR-PTNPTGNVLTDEELAKLDALARQHGI 213 (417)
T ss_pred cCccceeeccCCcccccccceeeccCHHHcc--cc--------cccceEEecC-CCCCCCCcccHHHHHHHHHHhhhcCC
Confidence 222122222111 12566877765 33 5788999855 55599999999999999999999999
Q ss_pred EEEEecccccchhhhcCchhHhh--hcCccEE-EEeccccCCCcee--eEEecCHHHHHHHHHHHHhhCCCcc-hhHHHH
Q 018240 172 KLHIDGARIFNAAVALGVPVRRL--VQAADSA-SVCLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGGGMR-QVGVLC 245 (359)
Q Consensus 172 ~li~D~a~~~~~~~~~~~~~~~~--~~~~d~~-~~s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 245 (359)
++++|.||+. ++.+.-+.+. .++.+++ .+|+|| +|.|+- |+++.++++++.+.++....+.... ..+.++
T Consensus 214 PliIDnAYg~---PFP~iifsd~~~~w~~NiilC~SLSK-~GLPG~R~GIiIane~viqaitnmn~iisLap~~~G~Aia 289 (417)
T COG3977 214 PLIIDNAYGV---PFPGIIFSDATPLWNENIILCMSLSK-LGLPGSRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIA 289 (417)
T ss_pred cEEEecccCC---CCCceecccccccCCCCEEEEeehhh-cCCCCcceeEEEccHHHHHHHHhccceeeecCCCccHHHH
Confidence 9999999532 2233322222 1345554 459999 577654 8999999999997766543332221 122222
Q ss_pred HHHHH--HHHHhHHH-----HhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCcee
Q 018240 246 AAALV--ALQENVLV-----MLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLV 318 (359)
Q Consensus 246 ~~~~~--~l~~~~~~-----~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~ 318 (359)
+-++. .+...-++ .+++.+.....|+..|.+. .+.++. |.+.-|+|+-+.+ ..++.+++.++|+++|+.+
T Consensus 290 ~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~-~~~iHk-pEGAIFlWLWf~d-LPItt~~LYq~LKa~Gvl~ 366 (417)
T COG3977 290 AEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEY-RCLIHK-PEGAIFLWLWFKD-LPITTEELYQRLKARGVLM 366 (417)
T ss_pred HHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcc-ceeeec-CCcceeehhhhcc-CCCCHHHHHHHHHhCeEEE
Confidence 22211 12122121 2223333344455555444 344433 4466667777665 3468999999999999999
Q ss_pred ccCC-------------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 018240 319 MPES-------------STRVRIVVHHQISANDVHYTLSCFQKIYAGVCEE 356 (359)
Q Consensus 319 ~~~~-------------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 356 (359)
+|+. ..|+|++. .-+++.++..+.+|.+.+++.-.+
T Consensus 367 VPG~~FFpGl~~ewpH~hqC~Rmn~--~~~~~~ie~Gva~lae~ve~~yq~ 415 (417)
T COG3977 367 VPGHYFFPGLDKEWPHTHQCMRMNY--VPEPEKIEKGVAILAEEVERAYQE 415 (417)
T ss_pred ecccccCCCCCCCCCCccceEEEec--CCCHHHHHHHHHHHHHHHHHHHhc
Confidence 8873 34699998 578899999999999998876543
No 320
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.91 E-value=5.8e-21 Score=171.71 Aligned_cols=336 Identities=18% Similarity=0.206 Sum_probs=215.5
Q ss_pred cccccccCC---CCCChHHHHHHHHHcCCCCCCc---cCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHHhh
Q 018240 3 TRTVDLRSD---TVTKPTEAMRAAMASAEVDDDV---LMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLVHC 74 (359)
Q Consensus 3 ~~~id~~~~---~~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~~~ 74 (359)
.++|||.+. +....+|.+.+++.+....... ....+...++.+.++++++. +...+++||++|+..+++.+.
T Consensus 72 ~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr 151 (459)
T PRK06082 72 KKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLAR 151 (459)
T ss_pred CEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHH
Confidence 357898743 2334558888888875543211 12357778999999999864 356889999999999999887
Q ss_pred hhcC-CeEE-ecCCCcceeeccccccccCCc------------cceeeecCCCCC--C-C--------HHHHHHHhcCCC
Q 018240 75 ETRG-SEVI-LGDNSHIHIYENGGISTIGGV------------HPRTVKNNQDGT--M-D--------IDLIEAAIRDPK 129 (359)
Q Consensus 75 ~~~g-~~vl-~~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~--~-~--------~~~l~~~l~~~~ 129 (359)
.-.| .+|+ +....|+.+.. + ....+. .+..++.+.... . + ++.+++.+++.
T Consensus 152 ~~tgr~~ii~~~~~yHG~t~~--a-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~- 227 (459)
T PRK06082 152 HITGNFKVVSLWDSFHGASLD--A-ISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE- 227 (459)
T ss_pred HhcCCCEEEEEeCCCcCccHH--H-HhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC-
Confidence 4333 3455 44555555432 1 111111 112222111100 0 1 24577777631
Q ss_pred CCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEeccc
Q 018240 130 GEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSK 207 (359)
Q Consensus 130 ~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K 207 (359)
.++.+|++++..+. ++.+.+.+++++++++|++||+++|+||++... +..|.. ...+.-.+|+++ ++|
T Consensus 228 -----~~vAavIvEPv~g~-g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~--GRtG~~fa~e~~gv~PDiv~--~gK 297 (459)
T PRK06082 228 -----GGIGAFIAEAVRNT-DVQVPSKAYWKRVREICDKHNVLLIIDEIPNGM--GRTGEWFTHQAYGIEPDILC--IGK 297 (459)
T ss_pred -----CCEEEEEECCccCC-CCcCCCHHHHHHHHHHHHHcCCEEEEechhhCC--CccchhhHhHhhCCCCCEEE--ecc
Confidence 46889999998874 456778899999999999999999999997532 222322 112223577665 679
Q ss_pred cCCC---ceeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcCC---Cc
Q 018240 208 GLGA---PVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQLK---GL 280 (359)
Q Consensus 208 ~~g~---~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~~---g~ 280 (359)
.+++ |. |.+++++++..... ..... .++..+++.++++...++...+ +..++..++.++|++.|+++. ++
T Consensus 298 gl~gG~~P~-~av~~~~~i~~~~~-~~~~~-~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~ 374 (459)
T PRK06082 298 GLGGGLVPI-AAMITKDKYNTAAQ-ISLGH-YTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPL 374 (459)
T ss_pred cccCCCCcc-eEEEEcHHHHhhcc-CCCCC-CCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 8864 33 44556666654321 11111 4556677888888888865543 356677778888888887641 22
Q ss_pred eEecCCccceEEEEEeccc------hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 281 RVDVDAVETNIVYFEITED------SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
.... ...+.++.+.+..+ .......+...+.++|+.+.+.+.+.+|+++...+++++++++++++++++.++.
T Consensus 375 i~~v-rG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~ 453 (459)
T PRK06082 375 IGDV-RGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVSQGNVIQLSPPLIITREELTQALAILEEAIAKIC 453 (459)
T ss_pred eeee-eeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEecCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 1111 34566666666421 0112456778888999999876678999999889999999999999999998875
Q ss_pred hh
Q 018240 355 EE 356 (359)
Q Consensus 355 ~~ 356 (359)
+.
T Consensus 454 ~~ 455 (459)
T PRK06082 454 QD 455 (459)
T ss_pred hh
Confidence 43
No 321
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.91 E-value=4e-21 Score=172.95 Aligned_cols=338 Identities=14% Similarity=0.137 Sum_probs=216.0
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCC----CccCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDD----DVLMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~ 72 (359)
.++|||.++ +....+|++.+++.+..... .....++...++.+.|+++++. +...+++||++|+..+++.
T Consensus 56 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~Alkl 135 (460)
T PRK06916 56 NEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKM 135 (460)
T ss_pred CEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHH
Confidence 367898876 33455688888888755431 1122456678888999998754 4568999999999999998
Q ss_pred hhh------hc-CCeEEecCC-CcceeeccccccccCCc------------cceeeecCCC------CC------CCHHH
Q 018240 73 HCE------TR-GSEVILGDN-SHIHIYENGGISTIGGV------------HPRTVKNNQD------GT------MDIDL 120 (359)
Q Consensus 73 ~~~------~~-g~~vl~~~~-~~~~~~~~~~~~~~~g~------------~~~~v~~~~~------~~------~~~~~ 120 (359)
+.. .+ ..+|+.-+. +|+.+.. + ....+. .+..++.+.. .. -+++.
T Consensus 136 Ar~~~~~~g~tgr~~ii~~~~~YHG~t~~--a-ls~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~ 212 (460)
T PRK06916 136 AFQYWQNKGKPKKQRFVTLKNAYHGDTIG--A-VSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEE 212 (460)
T ss_pred HHHHHHhcCCCCCcEEEEECCcCCcccHH--h-HhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHH
Confidence 874 12 245665554 4443322 1 222211 1122222110 00 13456
Q ss_pred HHHHhcCCCCCccCCceeEEEEec-cccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh--Hhhhc
Q 018240 121 IEAAIRDPKGEIVYPTTRLICLEN-THANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV--RRLVQ 196 (359)
Q Consensus 121 l~~~l~~~~~~~~~~~~~~v~i~~-~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~ 196 (359)
+++.+++.. .++.+|++++ ...+ +|+ ++|.+++++++++|++||+++|+||++... +..|... ..+.-
T Consensus 213 l~~~l~~~~-----~~iAAvi~EP~iqg~-gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~--GRtG~~~a~~~~gv 284 (460)
T PRK06916 213 LEELLKEKH-----EEIAAIIVEPLVQGA-GGMITMPKGYLKGLRNLCTKYNVLFITDEVATGF--GRTGKMFACEHENV 284 (460)
T ss_pred HHHHHHhCC-----CcEEEEEEeccccCC-CCcccCCHHHHHHHHHHHHHcCCEEEeechhhCC--CcCchhhHHHhcCC
Confidence 677776321 5799999999 4664 455 467899999999999999999999997432 2223221 12223
Q ss_pred CccEEEEeccccCCCce-e-eEEecCHHHHHHHHHH-----HHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHH
Q 018240 197 AADSASVCLSKGLGAPV-G-SVIVGSKEFIKKARRL-----RKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAK 268 (359)
Q Consensus 197 ~~d~~~~s~~K~~g~~~-g-g~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~ 268 (359)
.+|+++ ++|.++++. . |.+++++++.+.+..- ....+.++..+++.++++...++...+ ...++..++.+
T Consensus 285 ~PDiv~--~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~ 362 (460)
T PRK06916 285 TPDIMT--AGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTE 362 (460)
T ss_pred CCCeee--eehhhhcCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 567664 568775432 2 5567788887765321 112445665677888888888865543 35667777788
Q ss_pred HHHHHHhcCCCce-EecCCccceEEEEEeccch---------HHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHH
Q 018240 269 LLAEGLNQLKGLR-VDVDAVETNIVYFEITEDS---------KLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISAND 338 (359)
Q Consensus 269 ~l~~~l~~~~g~~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~ 338 (359)
++++.|+++.... +..-...+.++.+.+..+. ......+...+.++||.+.+.+ ..+|+.++..++++|
T Consensus 363 ~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-~~l~~~Ppl~it~~~ 441 (460)
T PRK06916 363 YVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPLG-NTIVFMPPLASTIDE 441 (460)
T ss_pred HHHHHHHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEecC-CEEEEeCCcccCHHH
Confidence 8888887652211 1111234555555553210 0113578888899999997764 689999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 018240 339 VHYTLSCFQKIYAGVC 354 (359)
Q Consensus 339 i~~~~~~l~~~~~~~~ 354 (359)
+++++++|+++++++.
T Consensus 442 id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 442 LDEMLRILYKAISDVT 457 (460)
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999998764
No 322
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.90 E-value=9.1e-23 Score=176.65 Aligned_cols=292 Identities=20% Similarity=0.245 Sum_probs=185.8
Q ss_pred CccCCChHHHHHHHHHHHHhCCCCeEEcCCchH-HHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeec
Q 018240 32 DVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTM-GNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN 110 (359)
Q Consensus 32 ~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~-a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 110 (359)
+.+.+.....+.++..|+.||.+.++++++||+ ++..++.+++ ++||+|++++.+|.|.+. + ..+.|+++++++.
T Consensus 60 ~L~~p~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~-~~gd~VLv~RN~HkSv~~-a--lil~ga~Pvyi~p 135 (417)
T PF01276_consen 60 DLHDPEGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALC-RPGDKVLVDRNCHKSVYN-A--LILSGAIPVYIPP 135 (417)
T ss_dssp BTTTTBTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHT-TTTCEEEEETT--HHHHH-H--HHHHTEEEEEEEE
T ss_pred cccCCccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhc-CCCCEEEEcCCcHHHHHH-H--HHHcCCeEEEecC
Confidence 345556678999999999999999988888876 5556666666 699999999999999997 5 7888999999844
Q ss_pred C-CC----CCCCH-----HHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccc
Q 018240 111 N-QD----GTMDI-----DLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARI 180 (359)
Q Consensus 111 ~-~~----~~~~~-----~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~ 180 (359)
. .. +.++. +.+++.++++++.. ..++|++.+|. ..|++++ +++|+++|++++++|+|||||+
T Consensus 136 ~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k---~~~~vvlt~PT--Y~Gv~~d---i~~I~~~~h~~~~~llvDEAhG 207 (417)
T PF01276_consen 136 EDNEYGIIGGISPDEFNEEDIEEALKEHPDAK---APRLVVLTSPT--YYGVCYD---IKEIAEICHKHGIPLLVDEAHG 207 (417)
T ss_dssp EE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCH---CESEEEEESS---TTSEEE----HHHHHHHHCCTECEEEEE-TT-
T ss_pred CccccCCccCCChhhhhHHHHHHHHHhCcccc---CceEEEEeCCC--CCeEEEC---HHHHHHHhcccCCEEEEEcccc
Confidence 3 22 34566 99999999764331 24558885544 4699988 8999999999999999999975
Q ss_pred cchhhhcCchhHhhhcCcc-------EEEEeccccCCCcee-eEEecCHH---HHHHHHHHHHhhCCCcchhHHHHHHHH
Q 018240 181 FNAAVALGVPVRRLVQAAD-------SASVCLSKGLGAPVG-SVIVGSKE---FIKKARRLRKTLGGGMRQVGVLCAAAL 249 (359)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~d-------~~~~s~~K~~g~~~g-g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (359)
....+. ..+...+..++| +++.|.||++++... +++..+.+ -.++++..-..+. ++|++.++.+...
T Consensus 208 ah~~F~-~lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~-TTSPSY~lmASlD 285 (417)
T PF01276_consen 208 AHFGFH-PLPRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQ-TTSPSYPLMASLD 285 (417)
T ss_dssp TTGGCS-GGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS--SS--HHHHHHHH
T ss_pred ccccCC-CCccchhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHc-CCChHHHHHHHHH
Confidence 433322 222233445788 999999999987655 66655333 2244443333222 2444555555554
Q ss_pred HHHHHh----HHHHhhhHHHHHHHHHHHH---hcCCCceEecCCc----------------------------cceEEEE
Q 018240 250 VALQEN----VLVMLDGDHKKAKLLAEGL---NQLKGLRVDVDAV----------------------------ETNIVYF 294 (359)
Q Consensus 250 ~~l~~~----~~~~~~~~~~~~~~l~~~l---~~~~g~~~~~~~~----------------------------~~~~~~~ 294 (359)
.+.... -+...++..+++..+++.+ .+++++.+..++. ...-+.+
T Consensus 286 ~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K~ti 365 (417)
T PF01276_consen 286 VARAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPTKLTI 365 (417)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TTEEEE
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccCccccCCcEEEE
Confidence 443222 2236677778888888888 5566666543320 0111444
Q ss_pred Eec--------cchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHH
Q 018240 295 EIT--------EDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISAN 337 (359)
Q Consensus 295 ~~~--------~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~ 337 (359)
.++ ...|+.+..+.+.|+++||.+.-.+...+-+-++++.+++
T Consensus 366 ~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~d~~~vL~l~t~G~t~~ 416 (417)
T PF01276_consen 366 NTPGIDADGELSELGIPGYIVEKYLREHGIQVEKTDLYNVLFLFTIGDTKE 416 (417)
T ss_dssp E-STBETTSSB-SS---HHHHHHHHHHTTEE-SEEESSEEEEE--TTS-HH
T ss_pred EccCcCcCCcccccCCCHHHHHHHHHHcCCEEEeccCccEEEEecCCCCCC
Confidence 442 1246789999999998999997777777777777777764
No 323
>PRK07481 hypothetical protein; Provisional
Probab=99.90 E-value=1e-20 Score=170.00 Aligned_cols=337 Identities=21% Similarity=0.202 Sum_probs=212.4
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCc-----cCCChHHHHHHHHHHHHhC---CCCeEEcCCchHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDV-----LMHDPTAFRLETEMAKVMG---KEAGLFVPSGTMGNLISV 70 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~-----~~~~~~~~~l~~~la~~~~---~~~~~~~~~gt~a~~~~l 70 (359)
.++|||.++ +....+|++.+++.+....... ....+...++.+.+++.++ .+...+++||++|+..|+
T Consensus 42 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~Al 121 (449)
T PRK07481 42 KKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETAL 121 (449)
T ss_pred CEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHH
Confidence 357899875 4445558888888775543211 1245777888889999874 345688999999999999
Q ss_pred HHhhhh------cC-CeEEecCC-CcceeeccccccccCCc------------cceeeecCCC----CC-CCHHH-----
Q 018240 71 LVHCET------RG-SEVILGDN-SHIHIYENGGISTIGGV------------HPRTVKNNQD----GT-MDIDL----- 120 (359)
Q Consensus 71 ~~~~~~------~g-~~vl~~~~-~~~~~~~~~~~~~~~g~------------~~~~v~~~~~----~~-~~~~~----- 120 (359)
+.+..- ++ .+|+.-+. +|+.+.. + ....+. .+..++.+.. +. -|.+.
T Consensus 122 klAr~~~~~~g~~~r~~ii~~~~~yHG~t~g--a-~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~ 198 (449)
T PRK07481 122 KLARQYWKVRGQPERTKFISLKQGYHGTHFG--G-ASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARIC 198 (449)
T ss_pred HHHHHHHHhcCCCCCcEEEEECCCcCCcchh--h-hccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHH
Confidence 988641 22 35665444 4443321 1 111110 1122221110 11 13333
Q ss_pred ---HHHHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhh
Q 018240 121 ---IEAAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRL 194 (359)
Q Consensus 121 ---l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~ 194 (359)
+++.+.. .+.+++.+|++++...+ +|. .++.+++++++++|++||+++|.||++..... .+.. ...+
T Consensus 199 ~~~le~~i~~----~~~~~iAAviiEPvqg~-gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGR--tG~~~a~~~~ 271 (449)
T PRK07481 199 ARLLEREIAF----QGPDTIAAFIAEPVQGA-GGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGR--TGSWFGSRGW 271 (449)
T ss_pred HHHHHHHHHh----cCCCcEEEEEEecccCC-cCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCc--CchhhHhhhc
Confidence 3333431 11157999999998875 455 56779999999999999999999999753222 2221 1122
Q ss_pred hcCccEEEEeccccCCC---ceeeEEecCHHHHHHHHHHH-----HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHH
Q 018240 195 VQAADSASVCLSKGLGA---PVGSVIVGSKEFIKKARRLR-----KTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHK 265 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~---~~gg~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~ 265 (359)
.-.+|++++ +|.+++ |.++ +++++++.+.+.... ...++++..+++.++++...++...+ +..++..+
T Consensus 272 gv~PDiv~~--gKgl~gG~~Pi~a-v~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~ 348 (449)
T PRK07481 272 GVKPDIMCL--AKGITSGYVPLGA-TMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDLPANAAK 348 (449)
T ss_pred CCCCCEEEE--eecccCCCcCceE-EEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 235676655 588754 4444 667778877764211 13455666678888888888876543 35566777
Q ss_pred HHHHHHHHHhcCC---CceEecCCccceEEEEEeccch---------HHHHHHHHHHHHhcCceeccCCCcEEEEEeCCC
Q 018240 266 KAKLLAEGLNQLK---GLRVDVDAVETNIVYFEITEDS---------KLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQ 333 (359)
Q Consensus 266 ~~~~l~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~ 333 (359)
+.++|.+.|+++. ++.... ...+.++.+.+..+. ......+.+.+.++|+.+.+.+ ..+|+++...
T Consensus 349 ~g~~l~~~L~~l~~~~~~i~~v-rG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g-~~i~l~Ppl~ 426 (449)
T PRK07481 349 RGAYLLEGLQPLKERFELVGDV-RGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPSG-TKIILSPPLV 426 (449)
T ss_pred HHHHHHHHHHHHhhcCCCeEEE-eecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEecC-CEEEEECCCC
Confidence 7788887777641 211111 235666666653210 1234578888889999997765 4689998888
Q ss_pred CCHHHHHHHHHHHHHHHHHHH
Q 018240 334 ISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 334 ~~~~~i~~~~~~l~~~~~~~~ 354 (359)
++++|+++++++++++++++.
T Consensus 427 it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 427 IQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred CCHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999998753
No 324
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.90 E-value=4.8e-21 Score=171.92 Aligned_cols=332 Identities=19% Similarity=0.186 Sum_probs=209.8
Q ss_pred cccccccCCC----CCChHHHHHHHHHcCCCCCCcc-CCChHHHHHHHHHHHHhC-CCCeEEcCCchHHHHHHHHHhhhh
Q 018240 3 TRTVDLRSDT----VTKPTEAMRAAMASAEVDDDVL-MHDPTAFRLETEMAKVMG-KEAGLFVPSGTMGNLISVLVHCET 76 (359)
Q Consensus 3 ~~~id~~~~~----~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~l~~~la~~~~-~~~~~~~~~gt~a~~~~l~~~~~~ 76 (359)
.++|||.++. ....+|.+.+++.+.......+ ...+...++.+.+++.++ .+...+++|||+|+..+++.+..-
T Consensus 99 ~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~ 178 (474)
T PLN02482 99 NEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSFGAPCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAY 178 (474)
T ss_pred CEEEEecccccccccCCCCHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHh
Confidence 3578987762 3444589998888765443332 235566778888888774 456689999999999999988754
Q ss_pred cCC-eEEecCC-Ccceeeccccc-----c-----ccCCc------cceeeecCCCCCCCHHHHHHHhcCCCCCccCCcee
Q 018240 77 RGS-EVILGDN-SHIHIYENGGI-----S-----TIGGV------HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTR 138 (359)
Q Consensus 77 ~g~-~vl~~~~-~~~~~~~~~~~-----~-----~~~g~------~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 138 (359)
.|. +|+.... +|......... . ...+. .++.++.+ |++.+++.++++. .+++
T Consensus 179 tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-----d~~~l~~~l~~~~-----~~iA 248 (474)
T PLN02482 179 TGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYN-----DLEAVKKLFEANK-----GEIA 248 (474)
T ss_pred cCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCC-----ChHHHHHHHHhCC-----CceE
Confidence 443 5554444 44432110000 0 00111 11222322 7889998887432 4688
Q ss_pred EEEEeccccCCCceec-ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCC--ceee
Q 018240 139 LICLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGA--PVGS 215 (359)
Q Consensus 139 ~v~i~~~~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~--~~gg 215 (359)
+|++++..++ .|.+. +.+++++++++|++||+++|+||++. |.....+.....+...+|++ +++|.+|+ |.|+
T Consensus 249 avI~Epv~g~-~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~t-GfR~g~~ga~~~~gv~PDi~--t~gK~lggG~Piga 324 (474)
T PLN02482 249 AVILEPVVGN-SGFIVPKKEFLEGLREITKENGALLVFDEVMT-GFRIAYGGAQEYFGITPDLT--TLGKVIGGGLPVGA 324 (474)
T ss_pred EEEECCCCCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CeecCcchHhHHhCCCCCEE--EecchhhCCCceEE
Confidence 9999999885 46554 46999999999999999999999984 33332221122222356765 56788854 4555
Q ss_pred EEecCHHHHHHHHHHH-HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC---CCceEecCCccce
Q 018240 216 VIVGSKEFIKKARRLR-KTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL---KGLRVDVDAVETN 290 (359)
Q Consensus 216 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~~~~ 290 (359)
+++++++++.+.... ...+++++.+++.++++...++...+ +..++..++.++|++.|+++ -++.+......+
T Consensus 325 -v~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g- 402 (474)
T PLN02482 325 -YGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISG- 402 (474)
T ss_pred -EEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccce-
Confidence 478889988864211 23455666677888888888865533 36667777888888888764 123322112122
Q ss_pred EEEEEeccc-----------hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 291 IVYFEITED-----------SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 291 ~~~~~~~~~-----------~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
++.+.+..+ +......+.+.|.++||.+.+.+... + .++..++++|+|++++++++++++
T Consensus 403 ~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~-~-~psl~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 403 MFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFEA-G-FTSLAHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred EEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCCC-C-cCCCCCCHHHHHHHHHHHHHHHHh
Confidence 333333210 11234578888889999997643221 1 256689999999999999998875
No 325
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.90 E-value=6e-21 Score=171.67 Aligned_cols=337 Identities=16% Similarity=0.167 Sum_probs=211.4
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC-c---cCCChHHHHHHHHHHHHhCCC-----CeEEc-CCchHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD-V---LMHDPTAFRLETEMAKVMGKE-----AGLFV-PSGTMGNLI 68 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~-~---~~~~~~~~~l~~~la~~~~~~-----~~~~~-~~gt~a~~~ 68 (359)
.++|||.++ +....+|.+.+++.+...... . ...++...++.+.+.+.+... ..+++ +||++|+..
T Consensus 63 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~ 142 (464)
T PRK06938 63 RQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEA 142 (464)
T ss_pred CEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHH
Confidence 367899876 334556999999987653211 1 123566677778888776532 23455 699999999
Q ss_pred HHHHhhhhcCC-eEEecC-CCcceeeccccccccCC----------c--cceeeecCCCCC------------CCHHHHH
Q 018240 69 SVLVHCETRGS-EVILGD-NSHIHIYENGGISTIGG----------V--HPRTVKNNQDGT------------MDIDLIE 122 (359)
Q Consensus 69 ~l~~~~~~~g~-~vl~~~-~~~~~~~~~~~~~~~~g----------~--~~~~v~~~~~~~------------~~~~~l~ 122 (359)
+++.+...+|. +|+... .+|..+.. + ....+ . .+..++.+.+.. .+++.++
T Consensus 143 AlklAr~~tgr~~ii~~~~~yHG~t~~--a-ls~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 219 (464)
T PRK06938 143 ALKLVKTATGRSTVLSFQGGYHGMSQG--A-LSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLE 219 (464)
T ss_pred HHHHHHHhhCCCeEEEECCccCCccHH--H-HhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHH
Confidence 99998754443 455444 45544322 1 11111 0 122333221111 1256777
Q ss_pred HHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCcc
Q 018240 123 AAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAAD 199 (359)
Q Consensus 123 ~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d 199 (359)
+.+++..+. ..++.+|++++...+ .|. +.|.+++++++++|++||+++|+||++..... .|.. ...+.-.+|
T Consensus 220 ~~i~~~~~~--~~~iAAvI~EPiqg~-gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGR--tG~~~a~e~~gv~PD 294 (464)
T PRK06938 220 NLLDDPESG--VVLPAAVILEVVQGE-GGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGR--TGKMFAFEHAGIIPD 294 (464)
T ss_pred HHHHhhccC--CCceEEEEEccccCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc--CcHHHHHHhcCCCCC
Confidence 777632111 136899999998885 455 45689999999999999999999999753322 2321 112223567
Q ss_pred EEEEeccccCCC--ceeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhc
Q 018240 200 SASVCLSKGLGA--PVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQ 276 (359)
Q Consensus 200 ~~~~s~~K~~g~--~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~ 276 (359)
++++ +|.+|+ |.++ +++++++ +.+. ....+.++..+++.++++...++...+ +..++..++.++|.+.|++
T Consensus 295 iv~~--gKglggG~PlsA-v~~~~~~-~~~~--~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~ 368 (464)
T PRK06938 295 VVVL--SKAIGGSLPLAV-VVYREWL-DTWQ--PGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQ 368 (464)
T ss_pred EEEe--eccccCCCceEE-EeehhHh-hccC--CCCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 7765 577743 4445 4455554 4332 123566777778888888888876544 3555666677777777765
Q ss_pred C-C--CceEecCCccceEEEEEeccch------------HHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHH
Q 018240 277 L-K--GLRVDVDAVETNIVYFEITEDS------------KLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDV 339 (359)
Q Consensus 277 ~-~--g~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i 339 (359)
+ . ++.... ...+.++.+.+..+. ......+...+.++|+.+.+.+ ...+|+.++..++++|+
T Consensus 369 l~~~~~~i~~V-rG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~~~~~l~~~Ppl~it~~ei 447 (464)
T PRK06938 369 LQRDYPQLGDV-RGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGGRHGSVVRFLPPLIITAEQI 447 (464)
T ss_pred HHHhCCCeeee-eccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHH
Confidence 4 1 221111 345666666663210 1124567888889999987654 47899999889999999
Q ss_pred HHHHHHHHHHHHHHH
Q 018240 340 HYTLSCFQKIYAGVC 354 (359)
Q Consensus 340 ~~~~~~l~~~~~~~~ 354 (359)
+++++++++++.++.
T Consensus 448 d~~~~~l~~~l~~~~ 462 (464)
T PRK06938 448 DEVAEIFAEAVAAAV 462 (464)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998753
No 326
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=3.9e-21 Score=155.33 Aligned_cols=327 Identities=17% Similarity=0.160 Sum_probs=224.2
Q ss_pred cccccccCCCC----CChHHHHHHHHHcCCCCCCcc---CCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018240 3 TRTVDLRSDTV----TKPTEAMRAAMASAEVDDDVL---MHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~~~----~~~~~~~~~a~~~~~~~~~~~---~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
++++||-+.+. ...||.+.+++.+..+.-... -+.....++++.+.++||.+..+-+++|.+|++.++..++.
T Consensus 59 k~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssrafYnd~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~ 138 (427)
T KOG1402|consen 59 KEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSRAFYNDVLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARK 138 (427)
T ss_pred cchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhhHHHhhhhHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHH
Confidence 46788888633 355699999998755432211 12345678899999999999998899999999999998873
Q ss_pred h-------cCC-e-EEecCCCcceeeccccccccCCcc-------------ceeeecCCCCCCCHHHHHHHhcCCCCCcc
Q 018240 76 T-------RGS-E-VILGDNSHIHIYENGGISTIGGVH-------------PRTVKNNQDGTMDIDLIEAAIRDPKGEIV 133 (359)
Q Consensus 76 ~-------~g~-~-vl~~~~~~~~~~~~~~~~~~~g~~-------------~~~v~~~~~~~~~~~~l~~~l~~~~~~~~ 133 (359)
+ |.+ . |+....+++.... + ...+.+-. +..++.+ |.++|+..+++
T Consensus 139 wgy~~K~ip~nka~il~~~~nFhGrT~-~-ais~s~d~ds~~~fgp~~P~~~~~v~Y~-----d~eale~~l~~------ 205 (427)
T KOG1402|consen 139 WGYRKKNIPKNKAKILSAENNFHGRTL-G-AISLSTDPDSWDGFGPFLPGVVDKVPYG-----DAEALEVALKS------ 205 (427)
T ss_pred HHHhhccCCccceeEEEecccccCcee-e-eEEecCCcchhhccCCCCCCcceeeccC-----CHHHHHHHhcC------
Confidence 1 222 2 3333333322221 1 12222211 2222333 89999999997
Q ss_pred CCceeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH-hh-hcCccEEEEeccccCC
Q 018240 134 YPTTRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR-RL-VQAADSASVCLSKGLG 210 (359)
Q Consensus 134 ~~~~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~-~~-~~~~d~~~~s~~K~~g 210 (359)
++.+++++++... ..|++ .|..++.+++++|.+|++++|.||+|..-+.. |.... ++ ...+|+++++ |.++
T Consensus 206 -~~vaaFivEPIQG-EaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RT--Gk~la~d~env~PDivilg--KalS 279 (427)
T KOG1402|consen 206 -PNVAAFIVEPIQG-EAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLART--GKLLACDYENVRPDIVILG--KALS 279 (427)
T ss_pred -CCeeEEEeecccc-ccceEeCCchhHHHHHHHHHhhcEEEEehhhhhccccc--CcEEEeehhhcCCCeEEEe--cccc
Confidence 7899999999988 45665 55599999999999999999999998543332 32211 11 1257777765 8775
Q ss_pred Ccee--eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcCC----CceEe
Q 018240 211 APVG--SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQLK----GLRVD 283 (359)
Q Consensus 211 ~~~g--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~~----g~~~~ 283 (359)
++.- +.++++++++-.++.. ..|+++..+++.++.+.++++-..+ ...++...+.+.|+..|.+++ ++-..
T Consensus 280 GG~~Pvsavl~~~~im~~~~pg--eHgsTyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~ 357 (427)
T KOG1402|consen 280 GGVYPVSAVLADDDIMLNIKPG--EHGSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKE 357 (427)
T ss_pred CCeeeeEEEEecHHHHhccCCC--ccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhe
Confidence 5322 5566777887765433 2566666677888888888876554 355667777888888888862 22111
Q ss_pred cCCccceEEEEEec--cchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 284 VDAVETNIVYFEIT--EDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 284 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
. ...+.+..+.+. ...+.++.+++-.|.++|+..-|.....+|+.+...++++|+++.+++|.+.+.
T Consensus 358 V-RGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkptH~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 358 V-RGRGLLNAIVINPSKTSGQDAWDVCLALKENGLLAKPTHGNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred e-eccceEEEEEeccccccchhHHHHHHcccccccccCCCCCCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 1 335555444443 223478889999999999999998889999999999999999999999988764
No 327
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.90 E-value=2.8e-21 Score=155.00 Aligned_cols=315 Identities=16% Similarity=0.135 Sum_probs=226.0
Q ss_pred HHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCe---EEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeecc
Q 018240 18 EAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAG---LFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYEN 94 (359)
Q Consensus 18 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~---~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~ 94 (359)
+.+++++.+...++.....-+...++.+-+...|...+. ++.++|+.+.+.++..++. |||.|++....-++...
T Consensus 30 ~~V~~A~~~~~lgh~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~le-Pgd~vLv~~~G~wg~ra- 107 (385)
T KOG2862|consen 30 GRVQEAMSRPSLGHMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLE-PGDNVLVVSTGTWGQRA- 107 (385)
T ss_pred HHHHHhhcCCccccCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcC-CCCeEEEEEechHHHHH-
Confidence 889999988766654443445567888888888877654 6778899999999999995 99998877666566544
Q ss_pred ccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEE
Q 018240 95 GGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLH 174 (359)
Q Consensus 95 ~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li 174 (359)
+...++.|+++..++.+......++++.+.+.+ .++++|++.+.-+ .||+.-+ -++.+-++|++|+.+++
T Consensus 108 ~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsq-------h~p~~vfv~hgds-STgV~q~--~~~~~g~lc~k~~~lll 177 (385)
T KOG2862|consen 108 ADCARRYGAEVDVVEADIGQAVPLEEITEKLSQ-------HKPKAVFVTHGDS-STGVLQD--LLAISGELCHKHEALLL 177 (385)
T ss_pred HHHHHhhCceeeEEecCcccCccHHHHHHHHHh-------cCCceEEEEecCc-cccccch--HHHHHHHHhhcCCeEEE
Confidence 456788999999997777777899999999998 6889999966544 8999755 36777789999999999
Q ss_pred EecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHH--------------hhCCC--
Q 018240 175 IDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRK--------------TLGGG-- 237 (359)
Q Consensus 175 ~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~--------------~~~~~-- 237 (359)
||.+-+.|+.. ..+.++ ++|+.+.+..|.+|.|.| +.+..++...++++.-+. +++..
T Consensus 178 VD~VaSlggt~---F~mDew--gVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e 252 (385)
T KOG2862|consen 178 VDTVASLGGTE---FEMDEW--GVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGE 252 (385)
T ss_pred EechhhcCCcc---ceehhh--cccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCc
Confidence 99986665543 234444 899999999999999999 887778777777653332 12211
Q ss_pred -----cchhHHHHHHHHHHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecC--CccceEE-EEEeccchHHHHH
Q 018240 238 -----MRQVGVLCAAALVAL----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVD--AVETNIV-YFEITEDSKLYAA 305 (359)
Q Consensus 238 -----~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~--~~~~~~~-~~~~~~~~~~~~~ 305 (359)
...+-........+| +++++...+++++++++++..|+++ |++.... ....+.+ .+.++ .+.|..
T Consensus 253 ~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~~rlptvttv~vp--~gvDw~ 329 (385)
T KOG2862|consen 253 PRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL-GLQLFVVDEELRLPTVTTVKVP--YGVDWK 329 (385)
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CccceecChhhccCcceeeecC--CCCCHH
Confidence 001222223333333 5666668888999999999999998 8875322 2222222 24444 357899
Q ss_pred HHHHHHHhc-Cceec----cCCCcEEEEEeCCC-CCHHHHHHHHHHHHHHHHH
Q 018240 306 CLLKKLEEH-GVLVM----PESSTRVRIVVHHQ-ISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 306 ~~~~~l~~~-gi~~~----~~~~~~lRi~~~~~-~~~~~i~~~~~~l~~~~~~ 352 (359)
+++.++..+ ++.+. +-.+..+||.+..+ -+.+.++..++.|+..+.+
T Consensus 330 dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 330 DVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred HHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 999999555 55552 22466899975333 4567888888888877654
No 328
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.90 E-value=6.4e-21 Score=169.79 Aligned_cols=334 Identities=13% Similarity=0.121 Sum_probs=211.8
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCcc-CCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHHhhh
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDVL-MHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.++|||.++ +....+|.+.+++.+.......+ ..++...++.+.+.+.++. +...+++||++|+..+++.++.
T Consensus 53 ~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~ 132 (433)
T PRK00615 53 KTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTSYGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARG 132 (433)
T ss_pred CEEEEcccchhccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHH
Confidence 357899876 33455599998888765433222 2356677888888888864 3568999999999999999876
Q ss_pred hcCC-eEEe-cCCCcceeec-cccccccCCcc------c----------eeeecCCCCCCCHHHHHHHhcCCCCCccCCc
Q 018240 76 TRGS-EVIL-GDNSHIHIYE-NGGISTIGGVH------P----------RTVKNNQDGTMDIDLIEAAIRDPKGEIVYPT 136 (359)
Q Consensus 76 ~~g~-~vl~-~~~~~~~~~~-~~~~~~~~g~~------~----------~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 136 (359)
..|. +|+. ...+|+..-. .++ ....+.. . ..++. -|.+.+++.+++.. .+
T Consensus 133 ~tgr~~ii~~~~~yHG~td~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~-----~~ 201 (433)
T PRK00615 133 ITGRSIIIKFLGCYHGHADTLLQG-ISFSETSLDTLTHLVDTDLAHPLTLSLPY-----NDFQIFQTVMNSLG-----HR 201 (433)
T ss_pred hhCCCEEEEEcCccCCCCcccCcc-cccCCCCcCcCCCCCCCCCCCCCeEeCCC-----CCHHHHHHHHHhcC-----Cc
Confidence 4554 4554 4445543300 011 1111100 0 01111 17888998886421 46
Q ss_pred eeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCce-e
Q 018240 137 TRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV-G 214 (359)
Q Consensus 137 ~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~-g 214 (359)
+.+|++++..++ .|.. .+.+++++|+++|++||+++|+||+|. |...........+...+|++ +++|.+|+.. +
T Consensus 202 ~aavI~Epv~~~-~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~R~G~~ga~~~~gv~PDi~--~~gK~lggG~p~ 277 (433)
T PRK00615 202 VAGVIFEPICAN-MGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT-GFRVAQGGAAAIYHVKPDIT--VYGKILGGGLPA 277 (433)
T ss_pred eEEEEECCCCCC-CCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-cccccHhHHHHhcCCCCCeE--EEcccccCCcce
Confidence 889999998885 4554 456999999999999999999999984 33211111111122356765 4689987432 4
Q ss_pred eEEecCHHHHHHHHHHHH-hhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC---CCceEecCCccc
Q 018240 215 SVIVGSKEFIKKARRLRK-TLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL---KGLRVDVDAVET 289 (359)
Q Consensus 215 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~~~ 289 (359)
|++++++++++.+..... ..++++..++..+++++..++...+ ..+++..++.++|++.|++. .++.+.... .+
T Consensus 278 ~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~G 356 (433)
T PRK00615 278 AAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-YG 356 (433)
T ss_pred eeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-ec
Confidence 778889999888643211 2345666677888888888865432 34556666677775555542 144332222 45
Q ss_pred eEEEEEeccch-----------HHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 290 NIVYFEITEDS-----------KLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 290 ~~~~~~~~~~~-----------~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
.++.+.+..+. ......+...|.++||.+.+...... .++..++++|+++++++++++++++.
T Consensus 357 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~--~ls~~ht~~did~~~~a~~~~~~~~~ 430 (433)
T PRK00615 357 SMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFEAS--FLSSAHSMENLDYAQNVLIDSLEKVF 430 (433)
T ss_pred eEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCcccccc--ceecCCCHHHHHHHHHHHHHHHHHHh
Confidence 55555554211 11245788889899999876543222 34457899999999999999998863
No 329
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.90 E-value=9.5e-22 Score=171.88 Aligned_cols=309 Identities=11% Similarity=0.101 Sum_probs=202.8
Q ss_pred CCChHHHHHHHHHcCCCC------------CCccCCChHHHHHHHHHHHHhCCC--C-e-EEcCCchHHHHHHHHHhhhh
Q 018240 13 VTKPTEAMRAAMASAEVD------------DDVLMHDPTAFRLETEMAKVMGKE--A-G-LFVPSGTMGNLISVLVHCET 76 (359)
Q Consensus 13 ~~~~~~~~~~a~~~~~~~------------~~~~~~~~~~~~l~~~la~~~~~~--~-~-~~~~~gt~a~~~~l~~~~~~ 76 (359)
++..++.+++++.+...+ +..........++++.++++++.+ . . ++.++|+.++.+++..++.
T Consensus 11 P~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~- 89 (360)
T PRK05355 11 PAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLG- 89 (360)
T ss_pred CCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCC-
Confidence 334458999998875311 111111245688899999999963 2 3 4457788899999999995
Q ss_pred cCCeEEecCCCcceeeccccccccCCccceeeecCC-CCCCCHHHHHH-HhcCCCCCccCCceeEEEEeccccCCCceec
Q 018240 77 RGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ-DGTMDIDLIEA-AIRDPKGEIVYPTTRLICLENTHANCGGRCL 154 (359)
Q Consensus 77 ~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~-~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~ 154 (359)
+|+++++.....++... ..+++..|.. ..+..+. .+..+..++++ .++ +++++|.+.| ..|.||+..
T Consensus 90 ~g~~~l~i~~G~fg~r~-~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~--------~~~~~V~~th-~eTstGv~~ 158 (360)
T PRK05355 90 GGKKADYVDTGSWSKKA-IKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLS--------DDAAYVHYTS-NETIDGTEF 158 (360)
T ss_pred CCCeEEEEECCHHHHHH-HHHHHHhCCc-eEEecccccCCCCCCChhhccCC--------CCCCEEEEcc-CCCcceEec
Confidence 77776654444344332 2557777854 5554433 45555555555 666 5678898844 556999997
Q ss_pred ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHH-HH-
Q 018240 155 SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARR-LR- 231 (359)
Q Consensus 155 ~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~-~~- 231 (359)
+ ++.+| +|+++++|.++++|... ..+.. .|++++|.+|++| |.| |+++.+++..+++.. ..
T Consensus 159 ~--~i~~i------~g~l~vVDavss~g~~~---idv~~----~d~~~~ssqK~lg-P~Glg~l~~s~~~l~~~~~~~~~ 222 (360)
T PRK05355 159 H--ELPDT------GDVPLVADMSSDILSRP---IDVSK----FGLIYAGAQKNIG-PAGLTIVIVREDLLGRALPSIPS 222 (360)
T ss_pred C--ccccc------CCCcEEEEcCccccCcc---CCHHH----ccEEEEecccccc-CCceEEEEECHHHHhhcccCCCh
Confidence 4 25555 89999999998776553 33333 3588899999998 777 999999888877543 11
Q ss_pred ---------HhhCCCcchhHHHHHHHHHHH----HH-hHHHHhhhHHHHHHHHHHHHhcCCCceEecC-Cccc-eEEEEE
Q 018240 232 ---------KTLGGGMRQVGVLCAAALVAL----QE-NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVD-AVET-NIVYFE 295 (359)
Q Consensus 232 ---------~~~~~~~~~~~~~~~~~~~~l----~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~~~-~~~~~~ 295 (359)
.....++. +.....+...++ +. .++.+.++..++++++++.|++++.+....+ ...+ ..+.|.
T Consensus 223 ~~~~~~~~~~~~~~~Tp-~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~ 301 (360)
T PRK05355 223 MLDYKTHADNDSMYNTP-PTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFT 301 (360)
T ss_pred HHHHHHHHhcCCccCCC-cHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEE
Confidence 00111121 111122222233 33 4666777888999999999999943232222 1234 446677
Q ss_pred eccchHHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 296 ITEDSKLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 296 ~~~~~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
++.. .+..++.+.+.++|+.+.++. .+.+|+|+...++.+|++.+++.|++++++
T Consensus 302 ~~~~--~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 302 LADE--ELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred cCCh--HHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 7652 344677788888999985553 367999999999999999999999987654
No 330
>PRK06149 hypothetical protein; Provisional
Probab=99.90 E-value=5e-21 Score=186.69 Aligned_cols=343 Identities=13% Similarity=0.139 Sum_probs=217.6
Q ss_pred cccccccCCCC--CChHHHHHHHHHcCCCCCC--ccCCChHHHHHHHHHHHHh--CCCCeEEcCCchHHHHHHHHHhhhh
Q 018240 3 TRTVDLRSDTV--TKPTEAMRAAMASAEVDDD--VLMHDPTAFRLETEMAKVM--GKEAGLFVPSGTMGNLISVLVHCET 76 (359)
Q Consensus 3 ~~~id~~~~~~--~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~l~~~la~~~--~~~~~~~~~~gt~a~~~~l~~~~~~ 76 (359)
.+++||.++.. ...+|++.+++.+...... .....+...++.+.+++++ +.+.+++++||++|+..+++.+..-
T Consensus 585 ~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~ 664 (972)
T PRK06149 585 RSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTNSRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAA 664 (972)
T ss_pred CEEEECCCCccccCCCCHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHh
Confidence 46789988743 3345899988877543211 1113466788999999988 3566799999999999999977643
Q ss_pred cCC-eEE-ecCCCcceeeccccc-cc---cCC---c---cceeeecCCC--CCC---C-----HHHHHHHhcCCCCCccC
Q 018240 77 RGS-EVI-LGDNSHIHIYENGGI-ST---IGG---V---HPRTVKNNQD--GTM---D-----IDLIEAAIRDPKGEIVY 134 (359)
Q Consensus 77 ~g~-~vl-~~~~~~~~~~~~~~~-~~---~~g---~---~~~~v~~~~~--~~~---~-----~~~l~~~l~~~~~~~~~ 134 (359)
.|. +|+ +...+|+.+.....+ .. ..+ . .+..++.+.. +.+ + .+++++.++.... ..
T Consensus 665 tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~ 742 (972)
T PRK06149 665 SGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDA--SG 742 (972)
T ss_pred cCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhh--cC
Confidence 332 344 555566544220000 00 000 0 0112211111 111 1 2444444432111 11
Q ss_pred CceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEeccc-ccchhhhcCchhHhhhcCccEEEEeccccCCCce
Q 018240 135 PTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGAR-IFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV 213 (359)
Q Consensus 135 ~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~-~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~ 213 (359)
.++.+|++++..++.+....|.++++++.++|++||+++|+||++ ++|..+........+.-.+|++ +++|.+|.+.
T Consensus 743 ~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv--t~gK~lg~G~ 820 (972)
T PRK06149 743 RGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII--TMAKGMGNGH 820 (972)
T ss_pred CceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE--EecccccCCe
Confidence 578999999999876666778899999999999999999999998 3443321111112222356766 5678886432
Q ss_pred e-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC----CCceEecCCc
Q 018240 214 G-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL----KGLRVDVDAV 287 (359)
Q Consensus 214 g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~----~g~~~~~~~~ 287 (359)
. |++++++++.+.+... ..+.+++..+++.++++...++...+ +..++..++.++|++.|+++ |.+... ..
T Consensus 821 Pl~av~~~~~i~~~~~~~-~~~~sT~~gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~v--rG 897 (972)
T PRK06149 821 PLGAVITRREIAEALEAE-GYFFSSTGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGAV--HG 897 (972)
T ss_pred eeEEEEEcHHHHhhhccC-CcccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE--ee
Confidence 2 6677888888876531 12334456678888888888876544 34556666677787777664 222222 34
Q ss_pred cceEEEEEecc------chHHHHHHHHHHHHhcCceeccCCC--cEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 288 ETNIVYFEITE------DSKLYAACLLKKLEEHGVLVMPESS--TRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 288 ~~~~~~~~~~~------~~~~~~~~~~~~l~~~gi~~~~~~~--~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.|.++.+.+.. +.......+.+.|.++||.+.+.+. +.+||.++..++++++++++++|++++++
T Consensus 898 ~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 898 MGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTGDHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred cceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 56666666632 1112356788999999999977654 68999998899999999999999999865
No 331
>PRK07036 hypothetical protein; Provisional
Probab=99.90 E-value=1.9e-20 Score=168.69 Aligned_cols=339 Identities=17% Similarity=0.147 Sum_probs=213.1
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCC---Ccc--CCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDD---DVL--MHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~---~~~--~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~ 71 (359)
.++|||.++ +....+|++.+++.+..... ..+ ..++...++.+.+++.+.. +...+++||++|+..+++
T Consensus 51 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~Alk 130 (466)
T PRK07036 51 RRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALR 130 (466)
T ss_pred CEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHH
Confidence 357898876 33455588988888755431 112 2356677888888887753 456889999999999999
Q ss_pred Hhhhh------c-CCeEEecC-CCcceeeccccccccCCc------------cceeeecCCC----CCCC--------HH
Q 018240 72 VHCET------R-GSEVILGD-NSHIHIYENGGISTIGGV------------HPRTVKNNQD----GTMD--------ID 119 (359)
Q Consensus 72 ~~~~~------~-g~~vl~~~-~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~----~~~~--------~~ 119 (359)
.+..- + ..+|+.-+ .+|..+.- + ....+. .+..++.+.. ...+ .+
T Consensus 131 lAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~--a-~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 207 (466)
T PRK07036 131 FVHYYFNVRGRPAKKHIITRGDAYHGSTYL--T-ASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVD 207 (466)
T ss_pred HHHHHHHhcCCCCccEEEEEcCccCCccHh--h-hcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHH
Confidence 87532 1 24566444 44444322 1 111110 1222222110 1111 23
Q ss_pred HHHHHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hH-hhh
Q 018240 120 LIEAAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VR-RLV 195 (359)
Q Consensus 120 ~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~-~~~ 195 (359)
.+++.+.+ .+..++.+|++++...+ .|. ..|.+++++++++|++||+++|+||++..... .|.. .. .+.
T Consensus 208 ~~~~~i~~----~~~~~iAavi~EPv~g~-gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGR--tG~~~~~~~~~g 280 (466)
T PRK07036 208 EFEDKILS----LGADNIAAFIAEPILGS-GGVIVPPPGYHARMREICRRYDILYISDEVVTGFGR--LGHFFASEAVFG 280 (466)
T ss_pred HHHHHHHH----cCCCceEEEEEeCCcCC-CCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCc--CchhhhhhhhcC
Confidence 44555542 11157999999998875 455 56779999999999999999999999743212 1211 11 122
Q ss_pred cCccEEEEeccccCCC---ceeeEEecCHHHHHHHHHH---H--HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHH
Q 018240 196 QAADSASVCLSKGLGA---PVGSVIVGSKEFIKKARRL---R--KTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKK 266 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~---~~gg~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~ 266 (359)
..+|++ +++|.+++ |.++ +++++++.+.+... . ...+.++..+++.++++...++...+ +..++..++
T Consensus 281 v~PDiv--t~gK~l~gG~~Pi~a-v~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~ 357 (466)
T PRK07036 281 IQPDII--TFAKGLTSGYQPLGA-VIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREGLCEHVREV 357 (466)
T ss_pred CCCCEE--EEccccccCccccEE-EEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 356765 55688854 3444 66788888876421 1 12445666678888888888876543 356677777
Q ss_pred HHHHHHHHhcCCCceE-ecCCccceEEEEEeccch---------HHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCH
Q 018240 267 AKLLAEGLNQLKGLRV-DVDAVETNIVYFEITEDS---------KLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISA 336 (359)
Q Consensus 267 ~~~l~~~l~~~~g~~~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~ 336 (359)
.++|++.|+++....+ ..-...+.++.+.+..+. ......+.+.+.++||.+.+.+ ..+|++++..+++
T Consensus 358 g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-~~~~l~Ppl~it~ 436 (466)
T PRK07036 358 GPYFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLE-HLCVLSPPLIITR 436 (466)
T ss_pred HHHHHHHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeecC-CEEEEeCCCcCCH
Confidence 7888888766422111 111235666666664211 1124578888899999997755 5789998888999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 018240 337 NDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 337 ~~i~~~~~~l~~~~~~~~~ 355 (359)
+|+++++++++++++++.+
T Consensus 437 ~~id~~~~~l~~al~~~~~ 455 (466)
T PRK07036 437 AQIDEIVAILRAAIEETAD 455 (466)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987743
No 332
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.90 E-value=2e-22 Score=172.27 Aligned_cols=228 Identities=18% Similarity=0.215 Sum_probs=154.7
Q ss_pred CccCCChHHHHHHHHHHHHhCCCCeEE-cCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeec
Q 018240 32 DVLMHDPTAFRLETEMAKVMGKEAGLF-VPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN 110 (359)
Q Consensus 32 ~~~~~~~~~~~l~~~la~~~~~~~~~~-~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 110 (359)
+.+.+.....++++.+++++|.+..++ ++++++++..++.+++ ++||+|++++++|.+.+. + +.+.|++++.++.
T Consensus 53 ~l~~~~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~-~~gd~Vlv~~~~h~s~~~-~--~~~~g~~~~~v~~ 128 (294)
T cd00615 53 DLLDPTGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVC-GPGDKILIDRNCHKSVIN-G--LVLSGAVPVYLKP 128 (294)
T ss_pred CCCCCChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcC-CCCCEEEEeCCchHHHHH-H--HHHCCCEEEEecC
Confidence 344456678999999999999988876 5555678888888877 599999999999999876 3 5677888888854
Q ss_pred CCC------CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchh
Q 018240 111 NQD------GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAA 184 (359)
Q Consensus 111 ~~~------~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~ 184 (359)
+.+ +.+|++++++.+++. +++++|++.++ |++|.+++ +++|.++|+++|+++|+|++|+.+..
T Consensus 129 ~~~~~~~~~~~i~~~~l~~~l~~~------~~~k~v~l~~p--~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~ 197 (294)
T cd00615 129 ERNPYYGIAGGIPPETFKKALIEH------PDAKAAVITNP--TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFR 197 (294)
T ss_pred ccCcccCcCCCCCHHHHHHHHHhC------CCceEEEEECC--CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhc
Confidence 322 468999999999742 46888888654 48999987 89999999999999999999754321
Q ss_pred hhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHH--HHHHHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHH
Q 018240 185 VALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEF--IKKARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLV 258 (359)
Q Consensus 185 ~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~ 258 (359)
.....+......++|+++.|+||+++++.+ |++..+.+. .+++........ +++++....++...+++ ..-++
T Consensus 198 ~~~~~~~~~~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~~~~~-ttsps~~~~asl~~a~~~~~~~g~~ 276 (294)
T cd00615 198 FHPILPSSAAMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEALNLHQ-STSPSYLILASLDVARAMMALEGKE 276 (294)
T ss_pred cCcccCcchhhcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHHHHHC-CCCcHHHHHHHHHHHHHHHHHHhHH
Confidence 111111122224789999999999987644 665554332 223322222222 22233333344333432 11223
Q ss_pred HhhhHHHHHHHHHHHHh
Q 018240 259 MLDGDHKKAKLLAEGLN 275 (359)
Q Consensus 259 ~~~~~~~~~~~l~~~l~ 275 (359)
..++..++.+.+++.|.
T Consensus 277 ~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 277 LVEELIELALYARQEIN 293 (294)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 66677777888887765
No 333
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.90 E-value=6.6e-21 Score=150.02 Aligned_cols=319 Identities=18% Similarity=0.226 Sum_probs=225.9
Q ss_pred HHHHHHHHcCCCCCCc---c--C-----CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCC
Q 018240 18 EAMRAAMASAEVDDDV---L--M-----HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNS 87 (359)
Q Consensus 18 ~~~~~a~~~~~~~~~~---~--~-----~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~ 87 (359)
++.++++.+.-.+.+. . + ..|.+.++-+.+++++|.+..-++.++.++-++++.+++ ++||.|+++..+
T Consensus 31 ~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~-~~gd~vV~D~~a 109 (382)
T COG1103 31 EEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALC-KEGDWVVVDSLA 109 (382)
T ss_pred HHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHhc-cCCCEEEEcCcc
Confidence 7888888875333221 1 1 145667777789999999988888888999999999999 599999999999
Q ss_pred cceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHH
Q 018240 88 HIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEI 165 (359)
Q Consensus 88 ~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~ 165 (359)
|++.+- + +.+.|.++..+|.. +++.++++...+.|++..+..+ ..+.+.++.++..+ .|.+.+ -.++.++
T Consensus 110 HYttyv-A--AEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g-~~~~lallTh~Dg~-YGNl~D---akkva~i 181 (382)
T COG1103 110 HYTTYV-A--AERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGG-DPPALALLTHVDGE-YGNLAD---AKKVAKI 181 (382)
T ss_pred hHHHHH-H--HHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccC-CCceEEEEeccCCC-cCCchh---hHHHHHH
Confidence 999986 4 88899999999754 3467888888888876444332 34677777676663 466554 7999999
Q ss_pred HHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHH-H--------hhC
Q 018240 166 AKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLR-K--------TLG 235 (359)
Q Consensus 166 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~-~--------~~~ 235 (359)
|+++|++++..+||..|-++ .+..++ ++|+++.|.||.+..... |++..+.++.+...+.. . ..|
T Consensus 182 c~e~gvPlllN~AYt~Grmp---vs~ke~--g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellG 256 (382)
T COG1103 182 CREYGVPLLLNCAYTVGRMP---VSGKEI--GADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLG 256 (382)
T ss_pred HHHcCCceEeecceeecccc---cccccc--CCCEEEecCccchhccCCeeEEeehhHHHHHHHhhcccccccceeeeec
Confidence 99999999999998776554 333444 899999999999965333 77778888877754332 1 134
Q ss_pred CCcchhHHHHHHHHHHHHHhHHH--HhhhHHHHHHHHHHHHhcCCCceEec-CCccceEEEEEeccchH------HHHHH
Q 018240 236 GGMRQVGVLCAAALVALQENVLV--MLDGDHKKAKLLAEGLNQLKGLRVDV-DAVETNIVYFEITEDSK------LYAAC 306 (359)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~l~~~l~~~~g~~~~~-~~~~~~~~~~~~~~~~~------~~~~~ 306 (359)
.+....++. ...+++....+. +.+.-.++++++.+.|+++.|+.-.. .|.....+.|..+.-.. ....-
T Consensus 257 CT~rGapiv--TlmASfP~V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyF 334 (382)
T COG1103 257 CTVRGAPIV--TLMASFPHVVERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYF 334 (382)
T ss_pred ccccCchHH--HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCcee
Confidence 443333322 222333332221 33445578899999999985575422 23344455555543111 12335
Q ss_pred HHHHHHhcCcee-ccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 307 LLKKLEEHGVLV-MPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 307 ~~~~l~~~gi~~-~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+.++|.++||.- .|+-..++.+++. +++.|+++..+++++++++++
T Consensus 335 lY~ELK~RgI~GI~~G~Tk~~K~svy-Gl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 335 LYEELKKRGIHGIQPGQTKYFKLSVY-GLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred eHHHHHhcCccccccCceeEEEEEee-cCCHHHHHHHHHHHHHHHHhc
Confidence 788999999974 6777888999986 899999999999999999875
No 334
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=2.5e-21 Score=151.54 Aligned_cols=270 Identities=16% Similarity=0.162 Sum_probs=191.5
Q ss_pred EEcCCchHHHHHHHHHhhhhcC-CeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCC
Q 018240 57 LFVPSGTMGNLISVLVHCETRG-SEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYP 135 (359)
Q Consensus 57 ~~~~~gt~a~~~~l~~~~~~~g-~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~ 135 (359)
+++.-|+...+-++...+.-|| ++|+.-.|+ ++.|. .-+...+++++.++.+.++.+|.+.+.+.++.. .
T Consensus 89 ic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPt-ysMY~--v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~d------s 159 (375)
T KOG0633|consen 89 ICVGVGSDELIDLIIRCVCDPGKEKILDCPPT-YSMYV--VDAAINDAEVVKVPLNPDFSLNVDAIAEVLELD------S 159 (375)
T ss_pred eEEecCcHHHHHHHHhheecCCccceeecCCc-ceeEE--EEeecCCceEEEecCCCCccccHHHHHHHHhcc------c
Confidence 7777777666555554444588 667777777 67776 337888999999999999999999999999852 5
Q ss_pred ceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh-hcCccEEEE-eccccCCCce
Q 018240 136 TTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL-VQAADSASV-CLSKGLGAPV 213 (359)
Q Consensus 136 ~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~~d~~~~-s~~K~~g~~~ 213 (359)
.++++++ ++++||||.....+++.+|.+.-. +.++++||||.-+.- .+ +...+ ....+++++ ++||.||. .
T Consensus 160 ~iK~~F~-tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFsg--~~-S~~~lV~kYpNLivlqTlSKsfGL-A 232 (375)
T KOG0633|consen 160 KIKCIFL-TSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFSG--VE-SRMKLVKKYPNLIVLQTLSKSFGL-A 232 (375)
T ss_pred cceEEEE-cCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEeecc--cc-ccchHhHhCCceeehhhhhhhcCc-c
Confidence 8999999 556669999999888888877543 789999999743221 12 22333 346667777 99999986 3
Q ss_pred e---eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCC
Q 018240 214 G---SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDA 286 (359)
Q Consensus 214 g---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~ 286 (359)
| |+-..+..+.+.+.+.+..+.... ....+++.++. +..+..++...+.+.+|...|.++|++.-...+
T Consensus 233 GiRvG~~~~~~~ia~iln~~KaPYNiS~----~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg 308 (375)
T KOG0633|consen 233 GIRVGYGAFPLSIAEILNRAKAPYNISV----AGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGG 308 (375)
T ss_pred eeEeecccccHHHHHHHHhccCCccccc----hhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCc
Confidence 3 777788889888877766554433 22223333332 223336777778888999999999887644456
Q ss_pred ccceEEEEEeccch-HHHHHHHHHHHHhcCceec-----cCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 287 VETNIVYFEITEDS-KLYAACLLKKLEEHGVLVM-----PESSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 287 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~~~-----~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
..++|+.+.+.+.+ +.......+.+.+.|+.+. ++..+++||+. -++|+-..+++.|++.
T Consensus 309 ~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitv---Gt~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 309 SDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITV---GTPEENTVLMKCLKQF 374 (375)
T ss_pred ccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEc---CCcccchHHHHHHHhh
Confidence 78999999987543 2333344444488999983 34567899998 4677778888888764
No 335
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.90 E-value=5.3e-21 Score=170.06 Aligned_cols=310 Identities=17% Similarity=0.184 Sum_probs=197.2
Q ss_pred hHHHHHHHHHcCCCCCC--ccC-----CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCc
Q 018240 16 PTEAMRAAMASAEVDDD--VLM-----HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSH 88 (359)
Q Consensus 16 ~~~~~~~a~~~~~~~~~--~~~-----~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~ 88 (359)
.++++.+++.+...... .|. .++....+++.+++++|.+.+++++||+.|+..++.. + .+|++|++++..|
T Consensus 93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~~-l-~~GdeVIvs~~e~ 170 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAEDALVVNNNAAAVLLALNT-L-AKGKEVIVSRGEL 170 (454)
T ss_pred CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHH-h-CCcCEEEECCChh
Confidence 34777777765433211 111 2345689999999999999999999999998888844 4 4999999998775
Q ss_pred ce---eeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC--ce--ecChhhHHH
Q 018240 89 IH---IYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG--GR--CLSVEYTDS 161 (359)
Q Consensus 89 ~~---~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt--G~--~~~~~~l~~ 161 (359)
.. .+......+..|++++.++.+ ...+++++++.++ ++|++|+++++.| ++ |. ..| +++
T Consensus 171 v~~ggs~~i~~~~~~~G~~~~~v~~~--~~~~l~dle~aI~--------~~T~lv~~~h~sN-~~~~G~~~~~d---l~~ 236 (454)
T TIGR00474 171 VEIGGSFRIPDVMEQSGAKLVEVGTT--NRTHLKDYEDAIT--------ENTALLLKVHTSN-YRIVGFTEEVS---IAE 236 (454)
T ss_pred hhhcchhhHHHHHHHcCCEEEEeCCC--CCCCHHHHHHhcC--------cCCEEEEEEccCc-ccccCCCCCCC---HHH
Confidence 32 111001245678888888643 2348899999998 7899999988765 53 53 444 899
Q ss_pred HHHHHHHcCcEEEEecccccchhhhc------Cc--hhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHH-
Q 018240 162 VGEIAKKHGLKLHIDGARIFNAAVAL------GV--PVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRK- 232 (359)
Q Consensus 162 i~~~~~~~~~~li~D~a~~~~~~~~~------~~--~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~- 232 (359)
|+++|++||+++++|.+ .|..... .. .......++|++++|.+|++|+|.+|+++++++++++++...-
T Consensus 237 I~~la~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~~~i~~l~~~~l~ 314 (454)
T TIGR00474 237 LVALGREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKKELIERLKKNPLT 314 (454)
T ss_pred HHHHHHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECHHHHHhhhhchhH
Confidence 99999999999999975 3332111 11 1123335899999999999998888999999888876432110
Q ss_pred -hhC-CCcch-----------hHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcC--CCce--EecCC---------
Q 018240 233 -TLG-GGMRQ-----------VGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQL--KGLR--VDVDA--------- 286 (359)
Q Consensus 233 -~~~-~~~~~-----------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~--~g~~--~~~~~--------- 286 (359)
... .-... .+..+......++. +..+.++..+++..+.+.|++. +++. +....
T Consensus 315 r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~-l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p 393 (454)
T TIGR00474 315 RALRVDKLTLAALEATLRLYLDPEKALEKIPTLRM-LTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLP 393 (454)
T ss_pred HHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHH-hccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCc
Confidence 000 00000 00001111111121 2225557777888999999875 4553 32221
Q ss_pred -ccceEEEEEeccchHHHHHHHHHHHHhcCceecc-CCCcEEEEEeCCCCCHHHHHHHHHHH
Q 018240 287 -VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMP-ESSTRVRIVVHHQISANDVHYTLSCF 346 (359)
Q Consensus 287 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~-~~~~~lRi~~~~~~~~~~i~~~~~~l 346 (359)
..-+...+.+.. .+.++.++.+.|++....+.. -..+.+.+-+. .+.++|++.+++.|
T Consensus 394 ~~~l~~~~v~~~~-~~~~~~~l~~~lr~~~~~ii~r~~~~~~~ld~r-~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 394 DERLPSYAVTLTP-DGLSAEKLEARLRELPPPIIGRIEDDRFLLDLR-TLLEDEEELLIEAL 453 (454)
T ss_pred CCCCCeEEEEEec-CCCCHHHHHHHHhcCCCCEEEEEECCEEEEEeC-cCCHHHHHHHHHHh
Confidence 112234444443 235788999999887744422 33455666554 57788999888876
No 336
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=2.5e-22 Score=168.79 Aligned_cols=318 Identities=19% Similarity=0.231 Sum_probs=236.3
Q ss_pred hHHHHHHHHHcCCCC----CCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCccee
Q 018240 16 PTEAMRAAMASAEVD----DDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHI 91 (359)
Q Consensus 16 ~~~~~~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~ 91 (359)
..+.+.+++.+.... ....+....+.++|+..|+++|.+++++++-|-..+.+.+..++. ++.-|+-.+..|.+.
T Consensus 156 ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p~l~~-~gsLIiSDelNHaSi 234 (519)
T KOG1357|consen 156 CAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGVEDAIVFSMGFATNSMNIPSLLG-KGSLIISDELNHASL 234 (519)
T ss_pred CChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCCcceEEEeccccccccCcceeec-CCcceeeccccchhe
Confidence 347777777764222 223455677899999999999999999999998888888888885 999999999999998
Q ss_pred eccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCC----CccCC-ceeEEEEeccccCCCceecChhhHHHHHHHH
Q 018240 92 YENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKG----EIVYP-TTRLICLENTHANCGGRCLSVEYTDSVGEIA 166 (359)
Q Consensus 92 ~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~----~~~~~-~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~ 166 (359)
.. + +++.|+.++.+.++ |..+|++.|++... ..+.+ +.-+|+++...+ .-|.+.. +.++..++
T Consensus 235 ~~-G--aRLSgAtiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiys-mEg~iv~---Lp~vvalk 302 (519)
T KOG1357|consen 235 IT-G--ARLSGATTRVFRHN-----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYS-MEGTIVD---LPEVVALK 302 (519)
T ss_pred ec-c--ccccCceEEEEecC-----CHHHHHHHHHHHHhcCCCCcCCcchheeeeecccee-ccCeecc---cHHHHHhh
Confidence 76 6 99999999999988 88899988887411 12212 233566666665 4577665 89999999
Q ss_pred HHcCcEEEEecccccchhhhcCchhHhhh----cCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHHhhCCCcchhH
Q 018240 167 KKHGLKLHIDGARIFNAAVALGVPVRRLV----QAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVG 242 (359)
Q Consensus 167 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~----~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (359)
++|..+++.||||+.|+.+..|....++. .++|++..+++|.||. .||++.+++++++.++......-...+.++
T Consensus 303 kkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga-~GGyiagsk~lid~lrt~s~~~~yat~~sp 381 (519)
T KOG1357|consen 303 KKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGA-AGGYIAGSKELIDYLRTPSPSALYATSLSP 381 (519)
T ss_pred ccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccc-ccceecCcHHHHhhhccCCCceeecccCCh
Confidence 99999999999999999877776655553 3566777799999885 889999999999997755544444444566
Q ss_pred HHHHHHHHHHH--------HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhc
Q 018240 243 VLCAAALVALQ--------ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEH 314 (359)
Q Consensus 243 ~~~~~~~~~l~--------~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 314 (359)
..+.-.+.+++ +..++..++..++..+++..|+.. |+.+... ..++.+.+.+-.+ .....+...|.++
T Consensus 382 pvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-gfivyG~-~dSpVvplll~~~--~k~~~f~r~~l~~ 457 (519)
T KOG1357|consen 382 PVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM-GFIVYGN-NDSPVVPLLLYGP--AKIVAFSREMLER 457 (519)
T ss_pred HHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC-cEEEecC-CCCCcceeeecCc--ccccHHHHHHHhc
Confidence 66665565553 223457778889999999999998 8887543 4565554443321 1445677788777
Q ss_pred CceeccCC-------CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 315 GVLVMPES-------STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 315 gi~~~~~~-------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
+|.++-.+ ....|+|.+..++.|+++++++.+.+.-+
T Consensus 458 nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~ 501 (519)
T KOG1357|consen 458 NIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGD 501 (519)
T ss_pred CceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhch
Confidence 77763322 23579999889999999999999987653
No 337
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.89 E-value=6.9e-21 Score=182.31 Aligned_cols=335 Identities=16% Similarity=0.141 Sum_probs=209.9
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCCCC--ccCCC-------hHHHHHHHHHHHHhCCCCeEEcCC-chHHHHHHHHHh
Q 018240 4 RTVDLRSDTVTKPTEAMRAAMASAEVDDD--VLMHD-------PTAFRLETEMAKVMGKEAGLFVPS-GTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~-------~~~~~l~~~la~~~~~~~~~~~~~-gt~a~~~~l~~~ 73 (359)
.+|-+.+ .+....|.+...+........ .|.+. +...++++.+++++|.+.+.++.+ |+++...++.++
T Consensus 500 ~~i~lGs-ct~~~~p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~ 578 (954)
T PRK05367 500 SMIPLGS-CTMKLNAAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAI 578 (954)
T ss_pred ceeeCCc-CCCcCCHHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHH
Confidence 3455666 333334555555554332222 23321 334778888999999998766665 445554555444
Q ss_pred h---hhcCC----eEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018240 74 C---ETRGS----EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 74 ~---~~~g~----~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
. .++|+ +|++++..|++... .+...|++++.++.+.++.+|+++|++.++++. .++.+|++.++.
T Consensus 579 r~~~~~~G~~~r~~vlis~~aH~snp~---sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~-----~~la~V~it~ps 650 (954)
T PRK05367 579 RAYHESRGEGHRDVCLIPSSAHGTNPA---SAVMAGMKVVVVACDENGNIDLDDLRAKAEEHA-----DNLAAIMITYPS 650 (954)
T ss_pred HHHhhccCCCCCCEEEEEchhhhhhHH---HHHHCCCEEEEECCCCCCCcCHHHHHHHHhccC-----CCeEEEEEEcCC
Confidence 3 13444 59999999988765 267889999999888889999999999997410 357777774433
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee------eEEecC
Q 018240 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG------SVIVGS 220 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g------g~~~~~ 220 (359)
. - |.+. +++++|+++|+++|+++++|+++..+..... .... .++|++++++||||+.|.| |++..+
T Consensus 651 t-~-G~~e--~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~--~pg~--~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr 722 (954)
T PRK05367 651 T-H-GVFE--ETIREICEIVHEHGGQVYLDGANMNAQVGLA--RPGD--IGADVSHLNLHKTFCIPHGGGGPGVGPIGVK 722 (954)
T ss_pred C-C-eeec--CCHHHHHHHHHHcCCEEEEECcChhhccCCC--Chhh--cCCCEEEecCcccCCCCcCCCCCceEEEeec
Confidence 3 2 4442 3499999999999999999999754322211 1222 3899999999999976643 577777
Q ss_pred HHHHHHHHHHHH---h---hCCCcchhHH----HHHHHHHHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCC
Q 018240 221 KEFIKKARRLRK---T---LGGGMRQVGV----LCAAALVAL----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDA 286 (359)
Q Consensus 221 ~~~~~~~~~~~~---~---~~~~~~~~~~----~~~~~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~ 286 (359)
+.+...+..... . ..+....++. .+..++..+ .+.+.+..++...+++++.+.|++...+.+..+.
T Consensus 723 ~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~ 802 (954)
T PRK05367 723 AHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGAN 802 (954)
T ss_pred ccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCC
Confidence 555444321110 0 0011111111 111112222 2334445556668999999999875232221111
Q ss_pred -ccceEEEEEe---ccchHHHHHHHHHHHHhcCceeccC---CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 287 -VETNIVYFEI---TEDSKLYAACLLKKLEEHGVLVMPE---SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 287 -~~~~~~~~~~---~~~~~~~~~~~~~~l~~~gi~~~~~---~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
....-+.+.+ +...+.+..++.++|.++|+..... ..+.++|+++...+++|+|++++++..+..++.+
T Consensus 803 ~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 803 GRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred CCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 0111133333 2211346789999999999987321 2678999999999999999999999999888764
No 338
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.89 E-value=3.6e-21 Score=180.04 Aligned_cols=299 Identities=15% Similarity=0.166 Sum_probs=195.7
Q ss_pred hHHHHHHHHHHHHhCCCCeEEcC-CchHHHHHHHHHhhh-------hcCCeEEecCCCcceeeccccccccCCccceeee
Q 018240 38 PTAFRLETEMAKVMGKEAGLFVP-SGTMGNLISVLVHCE-------TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVK 109 (359)
Q Consensus 38 ~~~~~l~~~la~~~~~~~~~~~~-~gt~a~~~~l~~~~~-------~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~ 109 (359)
+...++++.+++++|.+.+-+.. +|+++..++++++.. ...++|+++...|.+... .+...|++++.++
T Consensus 543 q~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpa---sa~~~GieVv~Vp 619 (954)
T PRK12566 543 AMIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPA---SAQMAGMRVVIVE 619 (954)
T ss_pred HHHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHH---HHHHCCCEEEEec
Confidence 44578899999999999886655 677777677777653 124578999999977653 3677899999999
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc
Q 018240 110 NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV 189 (359)
Q Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 189 (359)
.+++|.+|+++|++.++++. +++++|++.++.+ .|.+ .+++++|+++++++|+++++|.++..+... -.
T Consensus 620 ~D~~G~iDle~L~a~I~~~~-----~~laaVmiT~Pnt--~Gv~--e~~V~eI~~iah~~Galv~vDgA~~~a~~~--l~ 688 (954)
T PRK12566 620 CDPDGNVDLDDLKAKAAAAG-----DRLSCLMITYPST--HGVY--EEGIREICEVVHQHGGQVYMDGANLNAQVG--LA 688 (954)
T ss_pred cCCCCCcCHHHHHHHhhccC-----CCEEEEEEEecCc--Ccee--cchHHHHHHHHHHcCCEEEEEeeChhhccC--CC
Confidence 88899999999999997421 5677777744433 3544 346999999999999999999997432221 11
Q ss_pred hhHhhhcCccEEEEeccccCCCcee------eEEecCHHHHHHHHHHH--HhhC-----CCcch----hHHHHHHHHHHH
Q 018240 190 PVRRLVQAADSASVCLSKGLGAPVG------SVIVGSKEFIKKARRLR--KTLG-----GGMRQ----VGVLCAAALVAL 252 (359)
Q Consensus 190 ~~~~~~~~~d~~~~s~~K~~g~~~g------g~~~~~~~~~~~~~~~~--~~~~-----~~~~~----~~~~~~~~~~~l 252 (359)
...++ ++|++.+++||||++|.| |.+...+++...++... ..-+ .+.+. +...+..++..+
T Consensus 689 ~Pg~~--GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi 766 (954)
T PRK12566 689 RPADI--GADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYI 766 (954)
T ss_pred Chhhc--CCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHH
Confidence 12333 899999999999987754 23333444443433221 0000 11111 111112222222
Q ss_pred HHh---HHHHhhhHHHHHHHHHHHHhcCCCceEecCCccce---EEEEE---eccchHHHHHHHHHHHHhcCcee----c
Q 018240 253 QEN---VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETN---IVYFE---ITEDSKLYAACLLKKLEEHGVLV----M 319 (359)
Q Consensus 253 ~~~---~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~l~~~gi~~----~ 319 (359)
... +.+.......+++++++.|.+..++.+ .+..+. -+.+. ++...+.+..++.++|.++||.. .
T Consensus 767 ~~lG~eLk~aa~~ailnAnYla~rL~~~~~v~~--~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~~f 844 (954)
T PRK12566 767 AMMGPQLADASEVAILSANYLANQLGGAFPVLY--RGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMSF 844 (954)
T ss_pred HHHCHHHHHHHHHHHHHHHHHHHHhHhhCCCCc--CCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEEee
Confidence 111 222333345688999999987433333 221122 12222 22212356788999999999976 2
Q ss_pred cCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 320 PESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 320 ~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
| ..+++|++++...+++|+|+++++|..+.+++.+
T Consensus 845 P-v~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~~ 879 (954)
T PRK12566 845 P-VPGTLMVEPTESESKAELDRFVEAMLSIRAEIGK 879 (954)
T ss_pred c-cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 4 3678999999999999999999999999988653
No 339
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.89 E-value=4.9e-20 Score=165.74 Aligned_cols=339 Identities=17% Similarity=0.170 Sum_probs=208.6
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCC-CCc---cCCChHHHHHHHHHHHHhCCC----CeEEc-CCchHHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVD-DDV---LMHDPTAFRLETEMAKVMGKE----AGLFV-PSGTMGNLIS 69 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~-~~~---~~~~~~~~~l~~~la~~~~~~----~~~~~-~~gt~a~~~~ 69 (359)
.++|||.++ +....+|++.+++.+.... ... ...++...++.+.+++.++.. ..+++ +||++|+..+
T Consensus 58 ~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~A 137 (459)
T PRK06931 58 NQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAA 137 (459)
T ss_pred CEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHH
Confidence 367899887 3345559999999886542 111 123566678888888887532 23344 7999999999
Q ss_pred HHHhhhhcCC-eEEecC-CCcceeeccccccccCC------------ccceeeecCCCCC--C------CHHHH----HH
Q 018240 70 VLVHCETRGS-EVILGD-NSHIHIYENGGISTIGG------------VHPRTVKNNQDGT--M------DIDLI----EA 123 (359)
Q Consensus 70 l~~~~~~~g~-~vl~~~-~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~--~------~~~~l----~~ 123 (359)
++.+..-.|. +|+... .+|..+.. + ....+ ..+..++.+.... . +.+.+ ++
T Consensus 138 lklAr~~tgr~~Ii~~~~~yHG~t~~--a-ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (459)
T PRK06931 138 IKLAKTYTGRSNVISFSGGYHGMTHG--A-LAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFEN 214 (459)
T ss_pred HHHHHHhcCCCeEEEECCCcCCccHH--H-HhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHH
Confidence 9988754443 465444 44444322 1 11111 0122222221110 0 22333 33
Q ss_pred HhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEE
Q 018240 124 AIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSA 201 (359)
Q Consensus 124 ~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~ 201 (359)
.+++. .....++.+|++++...+.+-...+.+++++++++|++||+++|+||++..... .|.. ...+.-.+|++
T Consensus 215 ~~~~~--~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGR--tG~~~a~~~~gv~PDiv 290 (459)
T PRK06931 215 FIEDV--ESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFAR--TGKMFAFEHAGIEPDII 290 (459)
T ss_pred HHHhh--hcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCc--CchHHHhhhcCCCCCEE
Confidence 33210 001146899999999885433356779999999999999999999999753322 2321 11222356766
Q ss_pred EEeccccCC--CceeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC-
Q 018240 202 SVCLSKGLG--APVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL- 277 (359)
Q Consensus 202 ~~s~~K~~g--~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~- 277 (359)
++ +|.++ .|.++ ++.++++ +.+. ....++++..+++.++++...++...+ +..++..++.++|++.|+++
T Consensus 291 t~--gK~l~gG~Pi~a-v~~~~~~-~~~~--~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~ 364 (459)
T PRK06931 291 VM--SKAVGGGLPLAV-LGIKKEF-DAWQ--PGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQ 364 (459)
T ss_pred Ee--cccccCCcceee-eeeHHHH-hhcc--CCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 55 57774 34544 5555553 4432 123566777788888888888875543 35566666777777777654
Q ss_pred C--CceEecCCccceEEEEEeccch------------HHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHH
Q 018240 278 K--GLRVDVDAVETNIVYFEITEDS------------KLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHY 341 (359)
Q Consensus 278 ~--g~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~ 341 (359)
. ++.... ...+.++.+.+..+. ......+.+.+.++|+.+.+.+ .+.+|+.++..++++++++
T Consensus 365 ~~~~~i~~v-rG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~eid~ 443 (459)
T PRK06931 365 KRYPCIGNV-RGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRNGNVVRLLPPLLITQAECEE 443 (459)
T ss_pred HhCCCeEeE-ecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCCcCHHHHHH
Confidence 1 221111 345666666663210 1124567788889999997654 4789999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 018240 342 TLSCFQKIYAGVCE 355 (359)
Q Consensus 342 ~~~~l~~~~~~~~~ 355 (359)
++++++++++++.+
T Consensus 444 ~~~~l~~~l~~~~~ 457 (459)
T PRK06931 444 FIDRFEQALLAAVK 457 (459)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999987644
No 340
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.89 E-value=9.8e-21 Score=165.90 Aligned_cols=302 Identities=11% Similarity=0.079 Sum_probs=196.1
Q ss_pred HHHHHHHHcCC-----CCCCccCCChHHHHHHHHHHHHhCCCC---eEEc-CCchHHHHHHHHHhhhhcCCeEEecCCCc
Q 018240 18 EAMRAAMASAE-----VDDDVLMHDPTAFRLETEMAKVMGKEA---GLFV-PSGTMGNLISVLVHCETRGSEVILGDNSH 88 (359)
Q Consensus 18 ~~~~~a~~~~~-----~~~~~~~~~~~~~~l~~~la~~~~~~~---~~~~-~~gt~a~~~~l~~~~~~~g~~vl~~~~~~ 88 (359)
|++++++.... .++..........+.++.++++++.+. .+++ .|||.++..++..++. ++.+++....|
T Consensus 16 ~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~--~~~l~i~~G~~ 93 (361)
T TIGR01366 16 LEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIE--KKSLHLSFGEF 93 (361)
T ss_pred HHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhccc--ccccEEecCHH
Confidence 88999988642 122222234566888999999999842 3554 5699999999998873 24455666666
Q ss_pred ceeecccccccc---CCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHH
Q 018240 89 IHIYENGGISTI---GGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEI 165 (359)
Q Consensus 89 ~~~~~~~~~~~~---~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~ 165 (359)
.+.+. ..+.+ .+ ++..++.+....++. .+. +++++|.++| .+|.||...|. ++|
T Consensus 94 ~~~~~--~~a~~~~~~~-~~~~~~~~~~~~~~~-----~~~--------~~~~lV~~~h-~et~tG~~~pi---~~I--- 150 (361)
T TIGR01366 94 SSKFA--KAVKLAPWLG-EPIIVTADPGSAPEP-----QAD--------PGVDVIAWAH-NETSTGVAVPV---RRP--- 150 (361)
T ss_pred HHHHH--HHHHhhhccC-CceEEecCCCCCCCC-----ccC--------CCCCEEEEcc-cCCccceeccc---ccc---
Confidence 55444 22332 33 555565443332222 233 6899999955 55589999984 444
Q ss_pred HHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHH-------h----
Q 018240 166 AKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRK-------T---- 233 (359)
Q Consensus 166 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~-------~---- 233 (359)
++++|+++++|.+++++... ..+. .+|++++|.+|++|+|.| ++++.+++..++++.... +
T Consensus 151 ~~~~g~~~iVDavqs~g~~~---idv~----~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~ 223 (361)
T TIGR01366 151 EGSDDALVVIDATSGAGGLP---VDIA----ETDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPEFLSLP 223 (361)
T ss_pred cccCCCeEEEEcCccccCCC---CCHH----HCCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCchhhhHH
Confidence 58899999999998776553 2222 279999999999998866 666778877766542110 0
Q ss_pred --h-----CCCcchhHHHHH-HHHHHH---H-H-hHHHHhhhHHHHHHHHHHHHhcCCCceEecCCc--cceE-EEEEec
Q 018240 234 --L-----GGGMRQVGVLCA-AALVAL---Q-E-NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV--ETNI-VYFEIT 297 (359)
Q Consensus 234 --~-----~~~~~~~~~~~~-~~~~~l---~-~-~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~--~~~~-~~~~~~ 297 (359)
. +.+...++.... +...++ . . ..+.+.++..++++++++.|++.+++++..... .++. ..+.++
T Consensus 224 ~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~ 303 (361)
T TIGR01366 224 TAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFV 303 (361)
T ss_pred HHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECC
Confidence 0 111222222211 112222 2 2 245456778888999999999985555432211 1222 224443
Q ss_pred cchHHHHHHHHHHHHhcCceeccC----CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 298 EDSKLYAACLLKKLEEHGVLVMPE----SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 298 ~~~~~~~~~~~~~l~~~gi~~~~~----~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.+++..++.+.|.++||.+.++ +...+|++++..++++|+++++++|+++++++
T Consensus 304 --~g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 304 --DDIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred --CccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 2468889999998899998654 24579999999999999999999999987753
No 341
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.89 E-value=1.6e-20 Score=168.19 Aligned_cols=328 Identities=14% Similarity=0.142 Sum_probs=200.3
Q ss_pred cccccccCC----CCCChHHHHH--HHHHcCCCCCC----c--cCCChHHHHHHHHHHHHh---CCCCeEEcCCchHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMR--AAMASAEVDDD----V--LMHDPTAFRLETEMAKVM---GKEAGLFVPSGTMGNL 67 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~--~a~~~~~~~~~----~--~~~~~~~~~l~~~la~~~---~~~~~~~~~~gt~a~~ 67 (359)
.++|||.++ +....+|.+. +++.+...... . ....+...++-+.+++.. +.+...+++||++|++
T Consensus 38 ~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve 117 (431)
T TIGR03251 38 RRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVE 117 (431)
T ss_pred CChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHH
Confidence 357899887 3445558888 77766443211 1 122444556666666664 2345689999999999
Q ss_pred HHHHHhhhh-------c------CCeEEecCC-CcceeeccccccccCCcc-------ce----ee--e-----cCCCC-
Q 018240 68 ISVLVHCET-------R------GSEVILGDN-SHIHIYENGGISTIGGVH-------PR----TV--K-----NNQDG- 114 (359)
Q Consensus 68 ~~l~~~~~~-------~------g~~vl~~~~-~~~~~~~~~~~~~~~g~~-------~~----~v--~-----~~~~~- 114 (359)
.|++.+..- . +.+|+.... +|+.+.. + ....+.. +. .+ + .+...
T Consensus 118 ~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~--a-ls~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 194 (431)
T TIGR03251 118 NALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGY--T-LSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNL 194 (431)
T ss_pred HHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchh--h-hhccCCccccccCCCCCCCccCCCCcccCCcccccc
Confidence 999988631 1 246765554 4444332 1 2121210 00 01 1 00000
Q ss_pred C-------CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhh
Q 018240 115 T-------MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA 186 (359)
Q Consensus 115 ~-------~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~ 186 (359)
. -+++++++.+++.. .++.+|++++...+ +|. ..+.+++++|+++|++||+++|+||++... +.
T Consensus 195 ~~~~~~~~~~l~~~~~~~~~~~-----~~iAavivEPv~g~-~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~--Gr 266 (431)
T TIGR03251 195 DQVIALEEEALRQARAAFAERP-----HDIACFIAEPIQGE-GGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGV--GL 266 (431)
T ss_pred chhhHHHHHHHHHHHHHHHhCC-----CcEEEEEEeccccC-CCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcc--Cc
Confidence 0 02344555665321 57999999998885 455 467799999999999999999999998622 22
Q ss_pred cCch--hHhhhcCccEEEEeccccCCCceeeEEecCH--HHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhh
Q 018240 187 LGVP--VRRLVQAADSASVCLSKGLGAPVGSVIVGSK--EFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLD 261 (359)
Q Consensus 187 ~~~~--~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~ 261 (359)
.|.. ...+.-.+|++++ +|.+ |.+|++.+++ ++...........+.++..++..++++..+++...+ ...+
T Consensus 267 tG~~~a~~~~gv~PDi~~~--gK~~--~~~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~ 342 (431)
T TIGR03251 267 TGTAWAYQQLGVQPDIVAF--GKKT--QVCGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEERLVD 342 (431)
T ss_pred cchHHHHHhcCCCCCEEEe--cccC--ccceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 2322 1122236777754 5654 5667776653 222111001112345555567777777877765433 2345
Q ss_pred hHHHHHHHHHHHHhc----CCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHH
Q 018240 262 GDHKKAKLLAEGLNQ----LKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISAN 337 (359)
Q Consensus 262 ~~~~~~~~l~~~l~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~ 337 (359)
+..++.++|.+.|++ .+++.... ...+.++.+.++.. .....+.+.|.++||.+.+.+...+|++++..++++
T Consensus 343 ~~~~~g~~l~~~L~~l~~~~~~~i~~v-rg~G~~~~i~~~~~--~~~~~~~~~l~~~Gvl~~~~g~~~lr~~P~l~~t~~ 419 (431)
T TIGR03251 343 NARVQGAHLLARLHELAAEFPHLVSNP-RGRGLMCAFDLPST--ADRDEVIRQLYREGVLLLGCGERSIRFRPPLTVTRE 419 (431)
T ss_pred HHHHHHHHHHHHHHHHHHhCccceecc-cccceeEEEEeCCH--HHHHHHHHHHHhCCeEEecCCCCeEEEECCccCCHH
Confidence 566666666666654 33233222 34567777777642 245678899999999998877788999999999999
Q ss_pred HHHHHHHHHHH
Q 018240 338 DVHYTLSCFQK 348 (359)
Q Consensus 338 ~i~~~~~~l~~ 348 (359)
|+++++++|++
T Consensus 420 eid~~l~~l~~ 430 (431)
T TIGR03251 420 EIDAAIDAIRR 430 (431)
T ss_pred HHHHHHHHHHh
Confidence 99999999975
No 342
>PRK06148 hypothetical protein; Provisional
Probab=99.89 E-value=4.8e-20 Score=179.89 Aligned_cols=338 Identities=16% Similarity=0.152 Sum_probs=216.9
Q ss_pred cccccccCCCC--CChHHHHHHHHHcCCCCC--CccCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHHhhhh
Q 018240 3 TRTVDLRSDTV--TKPTEAMRAAMASAEVDD--DVLMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLVHCET 76 (359)
Q Consensus 3 ~~~id~~~~~~--~~~~~~~~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~~~~~ 76 (359)
.+++||.++.. ...+|++.+++.+..... ......+...++.+.+++.+.. +.+.+++||++|+..+++.+..-
T Consensus 624 ~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~ 703 (1013)
T PRK06148 624 RAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNTRYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAH 703 (1013)
T ss_pred CEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcCCcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHh
Confidence 36789988743 344499999888755432 1112356778888888888754 45689999999999999998754
Q ss_pred cCC-eEEe-cCCCcceeeccccccccCCc------------cceeeecCC--CCCC---C-------HHHHHHHhcCCCC
Q 018240 77 RGS-EVIL-GDNSHIHIYENGGISTIGGV------------HPRTVKNNQ--DGTM---D-------IDLIEAAIRDPKG 130 (359)
Q Consensus 77 ~g~-~vl~-~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~--~~~~---~-------~~~l~~~l~~~~~ 130 (359)
.|. +|+. ...+|+.+.. + ....+. .+..++.+. .... + .+.+++.++....
T Consensus 704 tGr~~ii~~~~~YHG~t~~--a-~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~ 780 (1013)
T PRK06148 704 TGQRDAIVLDHAYHGTTTE--L-IDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAA 780 (1013)
T ss_pred cCCCeEEEEcCCccCCCcc--h-hhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhc
Confidence 443 4554 4445554432 1 111110 111111110 0011 1 1345555542111
Q ss_pred CccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc---hhHhhhcCccEEEEeccc
Q 018240 131 EIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV---PVRRLVQAADSASVCLSK 207 (359)
Q Consensus 131 ~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~---~~~~~~~~~d~~~~s~~K 207 (359)
...++.+|++++...+.+....|.+++++++++|++||+++|+||++...... |. ....+.-.+|+++ ++|
T Consensus 781 --~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRt--G~~~~a~e~~gv~PDivt--~gK 854 (1013)
T PRK06148 781 --KGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRV--GSHWWAFETQGVVPDIVT--MGK 854 (1013)
T ss_pred --cCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCC--CCcchhhhhcCCCcceee--ecc
Confidence 11469999999998865555677899999999999999999999998432222 21 1122223567654 468
Q ss_pred cCCC--ceeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC----CCc
Q 018240 208 GLGA--PVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL----KGL 280 (359)
Q Consensus 208 ~~g~--~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~----~g~ 280 (359)
.+|. |. |.+++++++.+.+..- ..+++++..+++.++++...++...+ +..++..++.++|++.|+++ |.+
T Consensus 855 ~lggG~Pl-gav~~~~ei~~~~~~g-~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i 932 (1013)
T PRK06148 855 PIGNGHPM-GAVVTTREIADSFDNG-MEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDII 932 (1013)
T ss_pred cccCCcce-EEEEEcHHHHhhccCC-CccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 8754 44 4466788888776421 12456666778888888888876544 35566777778888887764 222
Q ss_pred eEecCCccceEEEEEeccc------hHHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 281 RVDVDAVETNIVYFEITED------SKLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.- . ...+.++.+.+..+ .......+.+.|.++||.+.+.+ ...+|+.++..++++++++++++|++++++
T Consensus 933 ~~-V-rG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 933 GD-V-RGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSRADADHLLEVLDDVLAA 1010 (1013)
T ss_pred eE-E-eeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 11 1 23566666666421 11235678888999999997654 478999999999999999999999999987
Q ss_pred H
Q 018240 353 V 353 (359)
Q Consensus 353 ~ 353 (359)
+
T Consensus 1011 ~ 1011 (1013)
T PRK06148 1011 A 1011 (1013)
T ss_pred H
Confidence 5
No 343
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.89 E-value=2.8e-21 Score=169.44 Aligned_cols=311 Identities=16% Similarity=0.187 Sum_probs=192.5
Q ss_pred cccCCCCCChHHHHHHHHHcCCC-----CCCccCCC-------hHHHHHHHHHHHHhCCCC---eEEcCC-chHHHHHHH
Q 018240 7 DLRSDTVTKPTEAMRAAMASAEV-----DDDVLMHD-------PTAFRLETEMAKVMGKEA---GLFVPS-GTMGNLISV 70 (359)
Q Consensus 7 d~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~-------~~~~~l~~~la~~~~~~~---~~~~~~-gt~a~~~~l 70 (359)
+|..+.... ++.+++++.+... +...|..+ ....++++.++++++.+. .++++| ||+++..++
T Consensus 2 ~~~pGp~~~-p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~ 80 (355)
T cd00611 2 NFSAGPAAL-PEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVP 80 (355)
T ss_pred CCCCCCCCC-CHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHH
Confidence 344433333 3778888766431 11122222 456888999999999732 466666 999999999
Q ss_pred HHhhh--hcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCC-C-HHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018240 71 LVHCE--TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTM-D-IDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 71 ~~~~~--~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-~-~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
..+.. ++++.|+.....|.. . .+++..|+++..++.+.++.+ + .+..+..++ +++++|.+.+ .
T Consensus 81 ~~l~~~~~~~~~i~~g~~~~~~--~--~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~~lV~~~h-~ 147 (355)
T cd00611 81 LNLLGDKGTADYVVTGAWSAKA--A--KEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLA--------PDAAYVHYCS-N 147 (355)
T ss_pred HhcCCCCCeEEEEECCHHHHHH--H--HHHHhcCCCcEEEecccccCCCCCCCHhhcCCC--------CCCCEEEEeC-C
Confidence 99873 244444442222211 1 245777888888876544333 3 222223344 6889998855 5
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHH
Q 018240 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIK 225 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~ 225 (359)
+|.||...+ ++++.||+++++|.++++|... ..+..+ |++..|.+|++| |.| |+++.++++.+
T Consensus 148 ~t~tG~~~~--------~i~~~~g~~~~VDa~qs~g~~~---idv~~~----~~~~ss~~K~lG-P~G~g~l~~~~~~~~ 211 (355)
T cd00611 148 ETIHGVEFD--------EVPDTGGVPLVADMSSNILSRP---IDVSKF----GVIYAGAQKNLG-PAGVTVVIVRKDLLG 211 (355)
T ss_pred cccccEEcc--------eecccCCCeEEEEccccccCCC---CCHHHh----CEEEeecccccC-CCceEEEEECHHHHh
Confidence 558999743 3344599999999999886653 333333 344557999998 667 99999988887
Q ss_pred HHHHH-------HH--hhCCCcchhHH-HHHHHHHHH----HH-hHHHHhhhHHHHHHHHHHHHhcCCCce-EecC-Ccc
Q 018240 226 KARRL-------RK--TLGGGMRQVGV-LCAAALVAL----QE-NVLVMLDGDHKKAKLLAEGLNQLKGLR-VDVD-AVE 288 (359)
Q Consensus 226 ~~~~~-------~~--~~~~~~~~~~~-~~~~~~~~l----~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~-~~~ 288 (359)
++... .. ........++. ...+...++ +. ..+.+.++..++++++++.|+++||+. .... ...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~r 291 (355)
T cd00611 212 KARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRAR 291 (355)
T ss_pred hcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHc
Confidence 64421 10 00110111211 112222233 23 466577778899999999999998863 2111 123
Q ss_pred c-eEEEEEeccchHHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 289 T-NIVYFEITEDSKLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 289 ~-~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
+ ..+.|+++.. ....++.+.+.++|+.+.++. .+.+|++++.+++++|+++++++|+++
T Consensus 292 s~~vvsf~~~~~--~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 292 SRMNVPFRLGKE--ELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred CceEEEEEcCCh--hhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 3 3466776651 122555567778999854442 367999999999999999999999875
No 344
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.88 E-value=7.1e-20 Score=152.04 Aligned_cols=310 Identities=17% Similarity=0.180 Sum_probs=210.5
Q ss_pred HHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHH-hCCCC---------eEEcCCchHHHHHHHHHhhh-hcCCeEEec
Q 018240 18 EAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKV-MGKEA---------GLFVPSGTMGNLISVLVHCE-TRGSEVILG 84 (359)
Q Consensus 18 ~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~-~~~~~---------~~~~~~gt~a~~~~l~~~~~-~~g~~vl~~ 84 (359)
+.|.++-++.... ...|.+-.+...+.+.++++ ||.+. .+.+.|||.|+..+...+.. .+...|.++
T Consensus 47 ~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis 126 (396)
T COG1448 47 RAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWIS 126 (396)
T ss_pred HHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeC
Confidence 6666666654433 44677777888888888776 45442 27889999999988887654 345569999
Q ss_pred CCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHH
Q 018240 85 DNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSV 162 (359)
Q Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i 162 (359)
+|+|.. +. .+....|.++..++.- ++..+|.+.+...|++. +...+|++..++|||||.-++.+++++|
T Consensus 127 ~PtW~N-H~--~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a------~~~~vvLLH~CcHNPTG~D~t~~qW~~l 197 (396)
T COG1448 127 DPTWPN-HK--AIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTA------PEGSVVLLHGCCHNPTGIDPTEEQWQEL 197 (396)
T ss_pred CCCcHh-HH--HHHHhcCCceeeeeccccccccccHHHHHHHHHhC------CCCCEEEEecCCCCCCCCCCCHHHHHHH
Confidence 999554 66 6788899999888543 34558999999999875 5566888989999999999999999999
Q ss_pred HHHHHHcCcEEEEecccccchhhhcCch---hHhhh-cCccE-EEEeccccCCC---cee--eEEecCHHHHHHHH-HHH
Q 018240 163 GEIAKKHGLKLHIDGARIFNAAVALGVP---VRRLV-QAADS-ASVCLSKGLGA---PVG--SVIVGSKEFIKKAR-RLR 231 (359)
Q Consensus 163 ~~~~~~~~~~li~D~a~~~~~~~~~~~~---~~~~~-~~~d~-~~~s~~K~~g~---~~g--g~~~~~~~~~~~~~-~~~ 231 (359)
.++.++.|.+-++|-||-.+..+ .... ...+. ....+ +..|+||.||. ..| .++..+++...++. .+.
T Consensus 198 ~~~~~~r~lip~~D~AYQGF~~G-leeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk 276 (396)
T COG1448 198 ADLIKERGLIPFFDIAYQGFADG-LEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLK 276 (396)
T ss_pred HHHHHHcCCeeeeehhhhhhccc-hHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHH
Confidence 99999999999999886332221 1111 12222 23334 44599999976 345 34445666666554 233
Q ss_pred HhhCCCcchhHHHHHHHHHH------H----HHhHHHHhhhHHHHHHHHHHHHhcC-C--CceEecCCccceEEEEEecc
Q 018240 232 KTLGGGMRQVGVLCAAALVA------L----QENVLVMLDGDHKKAKLLAEGLNQL-K--GLRVDVDAVETNIVYFEITE 298 (359)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~------l----~~~~~~~~~~~~~~~~~l~~~l~~~-~--g~~~~~~~~~~~~~~~~~~~ 298 (359)
.....+++.++...+..... | +..+...++++.+++..|.+.|++. + .|.+.. ...|.|.+.-
T Consensus 277 ~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~-~Q~GMFsy~G--- 352 (396)
T COG1448 277 AIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFII-SQRGMFSYTG--- 352 (396)
T ss_pred HHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHh-hcCceeecCC---
Confidence 33333333333222222221 1 2334458888899999999999984 1 355432 2345444442
Q ss_pred chHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 299 DSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 299 ~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
.+.+++.....++||+++..| ||++. ++++..++.++++|.++
T Consensus 353 ---ls~~QV~rLree~~IY~v~sG----Ri~va-Gl~~~ni~~va~ai~~v 395 (396)
T COG1448 353 ---LSPEQVDRLREEFGIYLVASG----RINVA-GLNTSNIDYVAKAIAAV 395 (396)
T ss_pred ---CCHHHHHHHHHhccEEEecCC----eeeec-cCChhhHHHHHHHHHhh
Confidence 245555544489999998877 99988 89999999999999865
No 345
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.88 E-value=1.2e-20 Score=167.58 Aligned_cols=289 Identities=24% Similarity=0.284 Sum_probs=193.0
Q ss_pred CChHHHHHHHHHcCCC-CCCccCCChHHHHHHHH----HHHHhCCCC---eEEcCCchHHHHHHHHHhhhhc-------C
Q 018240 14 TKPTEAMRAAMASAEV-DDDVLMHDPTAFRLETE----MAKVMGKEA---GLFVPSGTMGNLISVLVHCETR-------G 78 (359)
Q Consensus 14 ~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~----la~~~~~~~---~~~~~~gt~a~~~~l~~~~~~~-------g 78 (359)
+.+++...+++..... +....+.+|....+|+. ++++++.+. +.++++||+|++.++.++..+. +
T Consensus 72 ~~~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~ 151 (460)
T COG0076 72 TRVPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAES 151 (460)
T ss_pred CCCHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcc
Confidence 3444555555554332 22223344566566655 556677742 4999999999999999875311 1
Q ss_pred C------eEEecCCCcceeeccccccccCCccceeeecCC-CCCCCHHHHHHHhcCCCCCccCCceeE-EEEeccccCCC
Q 018240 79 S------EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ-DGTMDIDLIEAAIRDPKGEIVYPTTRL-ICLENTHANCG 150 (359)
Q Consensus 79 ~------~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~-v~i~~~~~~pt 150 (359)
. .|+++..+|++..+ + +...|+....++... +..+|++++++++++ .+.. +++-+..++++
T Consensus 152 ~~~~~~P~ii~s~~aH~s~~K-a--a~~lG~~~~~v~~~~~~~~id~~~l~~~i~~--------~t~~g~vV~~aGtT~~ 220 (460)
T COG0076 152 GKPGGKPNIVCSETAHFSFEK-A--ARYLGLGLRRVPTVPTDYRIDVDALEEAIDE--------NTIGGVVVGTAGTTDT 220 (460)
T ss_pred cccCCCCeEEecCcchhHHHH-H--HHHhCCCceeEEeccCccccCHHHHHHHHHh--------hccCceEEEEecCCCC
Confidence 1 59999999999876 4 888899998887666 799999999999995 2222 23336777788
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH-hh-hcCccEEEEeccccCCCcee-eEEec-CHHHHHH
Q 018240 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR-RL-VQAADSASVCLSKGLGAPVG-SVIVG-SKEFIKK 226 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~-~~-~~~~d~~~~s~~K~~g~~~g-g~~~~-~~~~~~~ 226 (359)
|.+ |++++|.++|+++++++|||.|++....++...... .+ ...+|.+++++||++..|.| |+++. +++-..+
T Consensus 221 G~i---Ddi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~ 297 (460)
T COG0076 221 GSI---DDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRR 297 (460)
T ss_pred Ccc---CCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEECHHHhhh
Confidence 885 459999999999999999999964444433322222 12 25889999999999988877 65555 6644444
Q ss_pred HHHHHHhhCCC---------cchhHHHHHHHHHHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEE
Q 018240 227 ARRLRKTLGGG---------MRQVGVLCAAALVAL----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVY 293 (359)
Q Consensus 227 ~~~~~~~~~~~---------~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~ 293 (359)
...+...+... .+.++...++.+..+ .++..+..++..+.++++.+.|++.+.+++..+| ..+.+.
T Consensus 298 ~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p-~l~~V~ 376 (460)
T COG0076 298 ILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEP-ELPIVA 376 (460)
T ss_pred hhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCC-ccceEE
Confidence 33333322221 112233334444444 3444557788889999999999999669986544 889999
Q ss_pred EEeccchHHHHHHHHHHHHhcCcee
Q 018240 294 FEITEDSKLYAACLLKKLEEHGVLV 318 (359)
Q Consensus 294 ~~~~~~~~~~~~~~~~~l~~~gi~~ 318 (359)
|+.++... ...+..+++.+.|..+
T Consensus 377 fr~~~~~~-~~~~~~~~~~~~gw~v 400 (460)
T COG0076 377 FRLKDDED-TLADLSERLDRRGWQV 400 (460)
T ss_pred EEcCCccc-chhchHHHHHhcCcee
Confidence 99855211 1445566666677776
No 346
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.88 E-value=5.7e-20 Score=173.13 Aligned_cols=300 Identities=14% Similarity=0.112 Sum_probs=201.4
Q ss_pred hHHHHHHHHHHHHhCCCCe-EEcCCchHHHHHHHHHhhh-------hcCCeEEecCCCcceeeccccccccCCccceeee
Q 018240 38 PTAFRLETEMAKVMGKEAG-LFVPSGTMGNLISVLVHCE-------TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVK 109 (359)
Q Consensus 38 ~~~~~l~~~la~~~~~~~~-~~~~~gt~a~~~~l~~~~~-------~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~ 109 (359)
+...++++.+++++|.+++ +..++|+++...+++++.. ...+.|+++...|++... .+...|++++.++
T Consensus 530 q~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPa---sa~~~G~~Vv~V~ 606 (939)
T TIGR00461 530 ELIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPA---SAAMAGMQVVPVN 606 (939)
T ss_pred HHHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHH---HHHHCCCEEEEec
Confidence 4567889999999999976 4555666666656666653 234579999999988754 3778899999999
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc
Q 018240 110 NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV 189 (359)
Q Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 189 (359)
.+.+|.+|+++|++.++++ ..++++|++.++.+ +|.+-+ ++++|+++|+++|.++++|.++..+... -.
T Consensus 607 ~d~~G~iDle~L~~~i~~~-----~~~taaV~iT~pst--~G~~e~--~I~eI~~iah~~G~~v~VDgAq~~al~~--l~ 675 (939)
T TIGR00461 607 CDQDGNIDLVDLKNKAEQH-----GDELAAVMVTYPST--HGVFEP--TIQHACDIVHSFGGQVYLDGANMNAQVG--LT 675 (939)
T ss_pred cCCCCCcCHHHHHHHHhhc-----CCceEEEEEEeCCc--Cceecc--cHHHHHHHHHHcCCEEEEEecChhhCCC--CC
Confidence 8889999999999999831 14788998855544 577643 4999999999999999999997432221 11
Q ss_pred hhHhhhcCccEEEEeccccCCCc-----ee-eEEecCHHHHHHHHH--HHH---------hhCCCc---chhHHHHHHHH
Q 018240 190 PVRRLVQAADSASVCLSKGLGAP-----VG-SVIVGSKEFIKKARR--LRK---------TLGGGM---RQVGVLCAAAL 249 (359)
Q Consensus 190 ~~~~~~~~~d~~~~s~~K~~g~~-----~g-g~~~~~~~~~~~~~~--~~~---------~~~~~~---~~~~~~~~~~~ 249 (359)
.... .++|++.+|.||+|++| .| |++.+++++...+.. ... ..+... ..+...+..++
T Consensus 676 ~Pg~--~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~ 753 (939)
T TIGR00461 676 SPGD--LGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISW 753 (939)
T ss_pred Cccc--cCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHH
Confidence 1222 38999999999999744 22 788888765554321 100 001111 01111222222
Q ss_pred HHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccce---EEEEEecc---chHHHHHHHHHHHHhcCceec
Q 018240 250 VAL----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETN---IVYFEITE---DSKLYAACLLKKLEEHGVLVM 319 (359)
Q Consensus 250 ~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~l~~~gi~~~ 319 (359)
..+ .+.+.+..+....+++|+.+.|++ ++++..+...+. -+.++++. ..+.+..++.++|.++|+..-
T Consensus 754 ~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hap 831 (939)
T TIGR00461 754 MYIKMMGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAP 831 (939)
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeecc
Confidence 222 344554666777899999999987 455543321112 24444442 123578899999999999762
Q ss_pred cC---CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 320 PE---SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 320 ~~---~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
.. ..+.+-|.++...+++|+|++++++.++.+++.+
T Consensus 832 t~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 832 TLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred ccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 11 1236667776689999999999999998887764
No 347
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.88 E-value=3.6e-20 Score=161.11 Aligned_cols=283 Identities=15% Similarity=0.161 Sum_probs=189.9
Q ss_pred hHHHHHHHHHHHHhCCCC---eEEcC-CchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCC
Q 018240 38 PTAFRLETEMAKVMGKEA---GLFVP-SGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQD 113 (359)
Q Consensus 38 ~~~~~l~~~la~~~~~~~---~~~~~-~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 113 (359)
....++++.++++|+.+. .++++ |||.|+.+++..+.. +++++++.....++... ..+++..|+ +..+..++.
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~-~~~~~l~i~~G~fg~r~-~~~a~~~g~-~~~~~~~~~ 113 (349)
T TIGR01364 37 AVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLA-EGKVADYIVTGAWSKKA-AKEAKKYGV-VNVVASGKE 113 (349)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC-CCCeEEEEECCHHHHHH-HHHHHHhCC-cEEEecccc
Confidence 455788999999999632 45554 599999999999995 88887755555444433 356788887 666654322
Q ss_pred ----CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc
Q 018240 114 ----GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV 189 (359)
Q Consensus 114 ----~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 189 (359)
-.+++++++ ++ +++++|.+.+ ..|.||+..+ ++++.+++++++|.++++|... .
T Consensus 114 ~~~~~~~~~~~~~--~~--------~~~~~v~~th-~ETstGv~~~--------~l~~~~~~l~iVDavss~g~~~---i 171 (349)
T TIGR01364 114 GNYTKIPDPSTWE--IS--------EDAAYVHYCA-NETIHGVEFR--------ELPDVKNAPLVADMSSNILSRP---I 171 (349)
T ss_pred CCCCCCCCHHhcC--CC--------CCCCEEEEcC-CCCcccEecc--------eecccCCCeEEEEccccccCcc---C
Confidence 234555444 22 5788888844 5568999764 5566689999999998776553 2
Q ss_pred hhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHH-------HHhh--CCCcchhHH-HHHHHHHHH----HH
Q 018240 190 PVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRL-------RKTL--GGGMRQVGV-LCAAALVAL----QE 254 (359)
Q Consensus 190 ~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~-------~~~~--~~~~~~~~~-~~~~~~~~l----~~ 254 (359)
.+.. .|++++|.+|++| |.| |+++.+++..+++... .... ......++. ...+...++ +.
T Consensus 172 d~~~----~d~~~~ssqK~lg-P~Glg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~ 246 (349)
T TIGR01364 172 DVSK----FGLIYAGAQKNIG-PAGLTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQ 246 (349)
T ss_pred CHHH----ccEEEEecccccC-CCceEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHc
Confidence 3333 3588889999998 667 9999999888765321 1000 111111111 122222233 33
Q ss_pred -hHHHHhhhHHHHHHHHHHHHhcCCCceEecC--Cccc-eEEEEEeccchHHHHHHHHHHHHhcCceeccCC--CcEEEE
Q 018240 255 -NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVD--AVET-NIVYFEITEDSKLYAACLLKKLEEHGVLVMPES--STRVRI 328 (359)
Q Consensus 255 -~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi 328 (359)
..+.+.++..++++++++.|++++|+..... ...+ ..+.+.++.. .. ..++.+.+.++|+.+.++. .+.+|+
T Consensus 247 gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~-~~-~~~~~~~~~~~Gi~~~~~~~~~g~vRv 324 (349)
T TIGR01364 247 GGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE-EL-EKRFLKEAEERGLVSLKGHRSVGGMRA 324 (349)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh-hH-hHHHHHHHHHCCCcccCCccccCeeEE
Confidence 4666777888999999999999977654321 1234 4466776652 22 3677778889999665553 368999
Q ss_pred EeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 329 VVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 329 ~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
++..+++++|++.++++|++++++
T Consensus 325 S~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 325 SIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred ECcCCCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999987654
No 348
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.87 E-value=7.7e-20 Score=168.10 Aligned_cols=310 Identities=15% Similarity=0.101 Sum_probs=202.1
Q ss_pred ccCCChHHHHHHHHHHHHhCCCCeEEcCCchH-HHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC
Q 018240 33 VLMHDPTAFRLETEMAKVMGKEAGLFVPSGTM-GNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN 111 (359)
Q Consensus 33 ~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~-a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 111 (359)
.+.......+.++..|+.||.+...++.|||+ ++..++.+++ ++||.|++++.+|.|.+. +-..+.|+.++++...
T Consensus 169 L~~~eG~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~-~~Gd~VLvdRN~HKSv~h--gaLiLsGa~PVYl~P~ 245 (720)
T PRK13578 169 LLIHEGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALL-TPGDLVLFDRNNHKSNHH--GALIQAGATPVYLETA 245 (720)
T ss_pred CCCCChHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhc-CCCCEEEeecccHHHHHH--HHHHHcCCeEEEeecc
Confidence 34456667899999999999999988888776 5555666666 699999999999999887 2267889999998433
Q ss_pred CC-----CCCCH-----HHHHHHhcCC-CCCc-cCCceeEEEEeccccCCCceecChhhHHHHHHH-HHHcCcEEEEecc
Q 018240 112 QD-----GTMDI-----DLIEAAIRDP-KGEI-VYPTTRLICLENTHANCGGRCLSVEYTDSVGEI-AKKHGLKLHIDGA 178 (359)
Q Consensus 112 ~~-----~~~~~-----~~l~~~l~~~-~~~~-~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~-~~~~~~~li~D~a 178 (359)
.+ +.++. +.+++.|+++ ++.. ..+..+++++.++. ..|++++ +++|++. ++.++ +|++|||
T Consensus 246 ~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT--YdG~~yd---i~~I~~~~~h~~~-~llvDEA 319 (720)
T PRK13578 246 RNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGT--YDGTIYN---ARQVVDKIGHLCD-YILFDSA 319 (720)
T ss_pred ccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCC--Ccceeec---HHHHHHHhhccCC-cEEEeCc
Confidence 22 34564 4499999875 2211 11225788884444 5699998 7899888 67788 9999999
Q ss_pred cccchhhhcC---chhHhhhcCcc----EEEEeccccCCCcee-eEEecCHHHH---------HHHHHHHHhhCCCcchh
Q 018240 179 RIFNAAVALG---VPVRRLVQAAD----SASVCLSKGLGAPVG-SVIVGSKEFI---------KKARRLRKTLGGGMRQV 241 (359)
Q Consensus 179 ~~~~~~~~~~---~~~~~~~~~~d----~~~~s~~K~~g~~~g-g~~~~~~~~~---------~~~~~~~~~~~~~~~~~ 241 (359)
|+....+... .+...+..++| +++.|.||.+++... +++-.+...+ ++++..-..+. ++|++
T Consensus 320 hgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~q-STSPs 398 (720)
T PRK13578 320 WVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLHA-STSPF 398 (720)
T ss_pred chhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHHHHc-CCChH
Confidence 7443322111 22222345777 888899999977555 6665533221 33333322232 24445
Q ss_pred HHHHHHHHHHH---HH-hHHHHhhhHHHHHHHHHHHH-hcCCCceEecCC--------------------------c---
Q 018240 242 GVLCAAALVAL---QE-NVLVMLDGDHKKAKLLAEGL-NQLKGLRVDVDA--------------------------V--- 287 (359)
Q Consensus 242 ~~~~~~~~~~l---~~-~~~~~~~~~~~~~~~l~~~l-~~~~g~~~~~~~--------------------------~--- 287 (359)
..+.+....+- .. .-+...++..+.+..+++.+ +.++++++..++ .
T Consensus 399 Y~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~w 478 (720)
T PRK13578 399 YPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKW 478 (720)
T ss_pred HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccccccCccc
Confidence 44444443322 11 11235666777777888877 556666654210 0
Q ss_pred -------------cceEEEEEeccc---------hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHH
Q 018240 288 -------------ETNIVYFEITED---------SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSC 345 (359)
Q Consensus 288 -------------~~~~~~~~~~~~---------~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~ 345 (359)
...-+.+..+.- .|+.+..+.+.|+++||.+...+...+-+-++.+.++++++.++++
T Consensus 479 hgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~Lv~a 558 (720)
T PRK13578 479 HGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCDLNSILFLLTPAEDMAKLQQLVAM 558 (720)
T ss_pred cccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHH
Confidence 011122333220 0122788999998789999888888888888889999999999999
Q ss_pred HHHHHHH
Q 018240 346 FQKIYAG 352 (359)
Q Consensus 346 l~~~~~~ 352 (359)
|.++-+.
T Consensus 559 L~~f~~~ 565 (720)
T PRK13578 559 LARFEKH 565 (720)
T ss_pred HHHHHHh
Confidence 9877443
No 349
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=8.3e-20 Score=150.92 Aligned_cols=312 Identities=15% Similarity=0.166 Sum_probs=199.9
Q ss_pred CCccCCChHHHHHHHHHHHHhCCCCe-------E-EcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCC
Q 018240 31 DDVLMHDPTAFRLETEMAKVMGKEAG-------L-FVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGG 102 (359)
Q Consensus 31 ~~~~~~~~~~~~l~~~la~~~~~~~~-------~-~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g 102 (359)
...|+.+++.+-+|+.+|++...+++ + ++++++.|+...+..++..+.+.|++|-|- ++.|. +.....|
T Consensus 106 ~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQ-YPLYs--Ati~l~~ 182 (475)
T KOG0258|consen 106 LGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQ-YPLYS--ATISLLG 182 (475)
T ss_pred ccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCC-CchhH--HHHHHhC
Confidence 44688899999999999999855432 4 555566778888888887788899999998 56676 3455555
Q ss_pred ccceee--ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccc
Q 018240 103 VHPRTV--KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARI 180 (359)
Q Consensus 103 ~~~~~v--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~ 180 (359)
...+.+ +.+.+|.+|.++|++.+++.. ..-+++++++.||.| |||.+.+.+.+++|.++|.++++.++.||+|-
T Consensus 183 ~~~v~YyLdEe~~W~ld~~el~~~~~eA~---k~i~~r~lvvINPGN-PTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ 258 (475)
T KOG0258|consen 183 GTQVPYYLDEESNWSLDVAELERSVDEAR---KGINPRALVVINPGN-PTGQVLSEENIEGIICFAAEEGLVLLADEVYQ 258 (475)
T ss_pred CcccceeeccccCCCCCHHHHHHHHHHHh---ccCCceEEEEECCCC-ccchhhcHHHHHHHHHHHHHcCeEEechHHHH
Confidence 555554 556789999999999998754 225778877768776 99999999999999999999999999999964
Q ss_pred cchhhhc--Cchh----Hhhh-cC---ccEEEE-eccccCCC---ceeeEEe---cCHHHHHHHHHHHHh-hCCCcch--
Q 018240 181 FNAAVAL--GVPV----RRLV-QA---ADSASV-CLSKGLGA---PVGSVIV---GSKEFIKKARRLRKT-LGGGMRQ-- 240 (359)
Q Consensus 181 ~~~~~~~--~~~~----~~~~-~~---~d~~~~-s~~K~~g~---~~gg~~~---~~~~~~~~~~~~~~~-~~~~~~~-- 240 (359)
-..+... ..++ .++. .. ...+++ |.||.+.+ ..||++= .+++..+.+.++... .-.+.+.
T Consensus 259 ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~ 338 (475)
T KOG0258|consen 259 DNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQK 338 (475)
T ss_pred hhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchh
Confidence 4333211 1121 1222 12 235666 99999833 4456433 256666555433321 1111100
Q ss_pred -------hHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchH-H--------HH
Q 018240 241 -------VGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSK-L--------YA 304 (359)
Q Consensus 241 -------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~--------~~ 304 (359)
++.-............+........+++.+.+.+++++|+... ++.+..+.|..+..+.+ + ..
T Consensus 339 ~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn-~~qGAMY~fP~i~lP~kaie~A~~~~~~P 417 (475)
T KOG0258|consen 339 LVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCN-PVQGAMYLFPQISLPPKAIEAAKALGIAP 417 (475)
T ss_pred hhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeec-cCccceeecccccCCHHHHHHHHHhCCCC
Confidence 0000000011111222236677778899999999999999885 44567777766654321 1 11
Q ss_pred H-HHHHHH-HhcCceeccCCCc-------EEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 305 A-CLLKKL-EEHGVLVMPESST-------RVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 305 ~-~~~~~l-~~~gi~~~~~~~~-------~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
+ -.+.+| +..||.++||+++ .+|..+ +... + .+++.++++=.++.+
T Consensus 418 D~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~Ti---Lp~~-~-~~i~~~~~fH~~f~~ 472 (475)
T KOG0258|consen 418 DEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTI---LPPG-L-EIIEKFKKFHAEFMD 472 (475)
T ss_pred cHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEee---cCch-h-HHHHHHHHHHHHHHH
Confidence 1 233344 8899999998544 588886 3333 3 566666665555543
No 350
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.87 E-value=6.5e-20 Score=168.44 Aligned_cols=305 Identities=16% Similarity=0.142 Sum_probs=202.1
Q ss_pred CccCCChHHHHHHHHHHHHhCCCCeEEcCCchH-HHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeec
Q 018240 32 DVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTM-GNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN 110 (359)
Q Consensus 32 ~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~-a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 110 (359)
+.+.......+.++..|+.||++...+++|||+ ++..++.+++ .+||.|++++.+|.|.+. + ..+.|+.++++..
T Consensus 189 dLl~~~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~-~~Gd~VLvdRN~HKSv~h-a--Lilsga~PVYl~P 264 (714)
T PRK15400 189 SLLDHSGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSA-PAGSTVLIDRNCHKSLTH-L--MMMSDVTPIYFRP 264 (714)
T ss_pred CCCCCChHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhc-CCCCEEEeecccHHHHHH-H--HHHcCCeEEEecc
Confidence 344456677899999999999999988888865 6666666666 699999999999999887 5 7889999999844
Q ss_pred CCC-----CCCC-----HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccc
Q 018240 111 NQD-----GTMD-----IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARI 180 (359)
Q Consensus 111 ~~~-----~~~~-----~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~ 180 (359)
..+ +.++ .+.+++.++++++. .++..+++.++. ..|.+++ ++.|.+.|+.++ |++||||.
T Consensus 265 ~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~a---k~p~~~vit~pT--YdG~~yd---~~~I~~~~~~~~--ilvDEAwg 334 (714)
T PRK15400 265 TRNAYGILGGIPQSEFQHATIAKRVKETPNA---TWPVHAVITNST--YDGLLYN---TDFIKKTLDVKS--IHFDSAWV 334 (714)
T ss_pred cccccCCccCCCccccCHHHHHHHHHhCccc---cCccEEEEECCC--CccEecC---HHHHHHHhCCCC--EEEEccch
Confidence 322 3445 89999999876432 223356664443 5699998 788889998887 79999964
Q ss_pred cchhhhcCc-hhHhhhcCc---c--EEEEeccccCCCcee-eEEecCHHHH-HHHHHHHHhhCCCcchhHHHHHHHHHHH
Q 018240 181 FNAAVALGV-PVRRLVQAA---D--SASVCLSKGLGAPVG-SVIVGSKEFI-KKARRLRKTLGGGMRQVGVLCAAALVAL 252 (359)
Q Consensus 181 ~~~~~~~~~-~~~~~~~~~---d--~~~~s~~K~~g~~~g-g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (359)
....+.... ....+..++ | +++.|.||.+++... +++-.+..+. ++++..-..+ .++|++..+.+....+-
T Consensus 335 ah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~a~~m~-~STSPsY~l~ASLD~a~ 413 (714)
T PRK15400 335 PYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMH-TTTSPHYGIVASTETAA 413 (714)
T ss_pred hhhccCcccCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHHHHHHH-cCCCcHHHHHHHHHHHH
Confidence 433221111 122232344 4 777799999976544 4444322221 2222222222 23444555555544333
Q ss_pred HH----hHHHHhhhHHHHHHHHHHHHhcCCC------ceEecCCc----------------------------cceEEEE
Q 018240 253 QE----NVLVMLDGDHKKAKLLAEGLNQLKG------LRVDVDAV----------------------------ETNIVYF 294 (359)
Q Consensus 253 ~~----~~~~~~~~~~~~~~~l~~~l~~~~g------~~~~~~~~----------------------------~~~~~~~ 294 (359)
.. .-+...++..+.+..+++.+.++++ +++..+.. ...-+.+
T Consensus 414 ~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti 493 (714)
T PRK15400 414 AMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTL 493 (714)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEE
Confidence 21 1223566777788888888887766 55432110 1111333
Q ss_pred Eecc--------chHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 295 EITE--------DSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 295 ~~~~--------~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
..+. ..|+.+..+.+.|+++||.+...+...+-+.++++.++++++.++++|.++-+
T Consensus 494 ~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 494 LTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred EeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 3322 02456788999999999999888888899999999999999999999987644
No 351
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.87 E-value=2.5e-19 Score=164.56 Aligned_cols=304 Identities=16% Similarity=0.138 Sum_probs=200.5
Q ss_pred CccCCChHHHHHHHHHHHHhCCCCeEEcCCchH-HHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeec
Q 018240 32 DVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTM-GNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN 110 (359)
Q Consensus 32 ~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~-a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 110 (359)
+.........+.++..|+.||.+...+++|||+ ++..++.+++ .+||.|++++.+|.|.+. + ..+.|+.++++..
T Consensus 189 dLl~~~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~-~~Gd~VLvdRN~HKSv~~-a--Lilsga~PVYl~P 264 (713)
T PRK15399 189 SLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAA-PAGSTLLIDRNCHKSLAH-L--LMMSDVVPIWLKP 264 (713)
T ss_pred CCCCCChHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhc-CCCCEEEeecccHHHHHH-H--HHHcCCeeEEecc
Confidence 344456677899999999999999988888865 6666666766 699999999999999987 5 7889999999843
Q ss_pred CCC-----CCCCH-----HHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEE-EEeccc
Q 018240 111 NQD-----GTMDI-----DLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKL-HIDGAR 179 (359)
Q Consensus 111 ~~~-----~~~~~-----~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~l-i~D~a~ 179 (359)
..+ +.++. +.+++.++++++. .+++.+++.++. ..|.+++ +++|.+.| |+.+ ++||||
T Consensus 265 ~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~---~~p~~vvit~pT--YdGi~yd---~~~I~~~~---g~~~ilvDEAh 333 (713)
T PRK15399 265 TRNALGILGGIPRREFTRDSIEEKVAATTQA---QWPVHAVITNST--YDGLLYN---TDWIKQTL---DVPSIHFDSAW 333 (713)
T ss_pred cccccCCcCCCChhhccHHHHHHHHHhCCCc---CCceEEEEECCC--CCceeeC---HHHHHHHh---CCCEEEEeccc
Confidence 322 34555 8999999976532 244567774443 5699998 67777777 6666 699997
Q ss_pred ccchhhhcC-chhHhhhc--CccEE---EEeccccCCCcee-eEEecCHHHH-HHHHHHHHhhCCCcchhHHHHHHHHHH
Q 018240 180 IFNAAVALG-VPVRRLVQ--AADSA---SVCLSKGLGAPVG-SVIVGSKEFI-KKARRLRKTLGGGMRQVGVLCAAALVA 251 (359)
Q Consensus 180 ~~~~~~~~~-~~~~~~~~--~~d~~---~~s~~K~~g~~~g-g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (359)
.....+... .+...+.. ++|.+ +.|.||.+++... +++-.+..+. ++++..-..+ .++|++..+.+....+
T Consensus 334 gah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~~m~-~STSPsY~LmASLD~a 412 (713)
T PRK15399 334 VPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMH-TSTSPSYPIVASVETA 412 (713)
T ss_pred hhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHHHHH-cCCCcHHHHHHHHHHH
Confidence 433322111 11122222 46766 6799999977555 6665543322 2232222222 2344455555554433
Q ss_pred HHH----hHHHHhhhHHHHHHHHHHHHhcCCC------ceEecCC----------------------------ccceEEE
Q 018240 252 LQE----NVLVMLDGDHKKAKLLAEGLNQLKG------LRVDVDA----------------------------VETNIVY 293 (359)
Q Consensus 252 l~~----~~~~~~~~~~~~~~~l~~~l~~~~g------~~~~~~~----------------------------~~~~~~~ 293 (359)
-.. .-+...++..+.+..+++.+.++.+ +++..++ ....-+.
T Consensus 413 ~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~Klt 492 (713)
T PRK15399 413 AAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVT 492 (713)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEE
Confidence 321 1123556677777777887776544 3443210 0111133
Q ss_pred EEecc--------chHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 294 FEITE--------DSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 294 ~~~~~--------~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
+..+. ..|+.+..+.+.|+++||.+...+...+-+.++++.++++++.++++|.++-+
T Consensus 493 I~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 493 ILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred EEecCcccccccccCCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 44431 12567889999999999999888888888889989999999999999987744
No 352
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.87 E-value=1e-19 Score=162.38 Aligned_cols=329 Identities=15% Similarity=0.084 Sum_probs=199.8
Q ss_pred cccccccCC----CCCChHHHHHHHHHcC--CCC--CCccCCChHHHHHHHHHH----HHhC--CCCeEEcCCchHHHHH
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASA--EVD--DDVLMHDPTAFRLETEMA----KVMG--KEAGLFVPSGTMGNLI 68 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~--~~~--~~~~~~~~~~~~l~~~la----~~~~--~~~~~~~~~gt~a~~~ 68 (359)
.++|||.++ +....+|.+.+++.+. ... .......+...++.+.++ +.++ .+.+.+++||++|+..
T Consensus 58 ~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~~~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~ 137 (464)
T TIGR00699 58 NRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRPALGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANEL 137 (464)
T ss_pred CEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccccCCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHH
Confidence 357899887 4445569999999863 211 111112344455666654 3443 3456899999999999
Q ss_pred HHHHhhhh-------------------------c---CCeEEecCCCcceeeccccccccCCc-----------cceeee
Q 018240 69 SVLVHCET-------------------------R---GSEVILGDNSHIHIYENGGISTIGGV-----------HPRTVK 109 (359)
Q Consensus 69 ~l~~~~~~-------------------------~---g~~vl~~~~~~~~~~~~~~~~~~~g~-----------~~~~v~ 109 (359)
|++.+... + ..+|+....+|..... ++ ....+. ....++
T Consensus 138 AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~-~a-ls~t~~~~~~~~~~~~~~~~~~p 215 (464)
T TIGR00699 138 AFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLF-GS-LSTTRSKPIHKLDIPAFDWPQAP 215 (464)
T ss_pred HHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccH-HH-HHhcCCccccccCCCCCCceecC
Confidence 99988531 0 1256655554433322 11 111111 111111
Q ss_pred cCC-CC-------------CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceec-ChhhHHHHHHHHHHcCcEEE
Q 018240 110 NNQ-DG-------------TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLH 174 (359)
Q Consensus 110 ~~~-~~-------------~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~-~~~~l~~i~~~~~~~~~~li 174 (359)
.+. .. .-+++.+++.++++. .++.+|++++...+ .|... +.+++++++++|++||+++|
T Consensus 216 ~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~-----~~iAAvI~EPv~g~-~G~~~~~~~yl~~lr~lc~~~g~lLI 289 (464)
T TIGR00699 216 FPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWH-----KPVAAIIVEPIQSE-GGDNHASPDFFRKLRDITKKHNVAFI 289 (464)
T ss_pred CCCcccccccccccchhHHHHHHHHHHHHHHhcC-----CcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 111 00 013556777776321 46999999998884 46654 67999999999999999999
Q ss_pred EecccccchhhhcCch--hHhhh--cCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHH
Q 018240 175 IDGARIFNAAVALGVP--VRRLV--QAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALV 250 (359)
Q Consensus 175 ~D~a~~~~~~~~~~~~--~~~~~--~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (359)
+||++... ...|.. ...+. ..+|++ +++|.+|+ ||++++++.+ ... .....++++..++..++++..
T Consensus 290 ~DEV~tGf--GrtG~~fa~e~~gv~~~PDi~--t~gK~lg~--gG~~~~~~~~-~~~--~~~~~~~T~~gnp~~~aaa~a 360 (464)
T TIGR00699 290 VDEVQTGV--GATGKFWAHEHWNLDDPPDMV--TFSKKFQT--AGYFFHDPAF-RPN--KPYRQFNTWMGDPSRALILRE 360 (464)
T ss_pred EeeeeeCC--CCCcchhHHHhcCCCCCCCEE--Eehhhhcc--CCccccchhc-cCC--CCcccccCCCCCHHHHHHHHH
Confidence 99998432 222322 11111 137765 55798752 2333343221 100 111245566667777888887
Q ss_pred HHHHhHH-HHhhhHHHHHHHHHHHHhcC----CC-ceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCc
Q 018240 251 ALQENVL-VMLDGDHKKAKLLAEGLNQL----KG-LRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESST 324 (359)
Q Consensus 251 ~l~~~~~-~~~~~~~~~~~~l~~~l~~~----~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~ 324 (359)
.++...+ +..++..++.++|++.|+++ |. +.-......+.++.+.++.. .....+.+.+.++|+.+.+.+..
T Consensus 361 ~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~--~~~~~i~~~~~~~Gvl~~~~g~~ 438 (464)
T TIGR00699 361 IIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDE--AKRDKLLKKARNNGVNIGGCGVK 438 (464)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCH--HHHHHHHHHHHHCCcEEecCCCC
Confidence 8765543 34455666667777777654 31 21111114677777777542 24678889999999999777778
Q ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 325 RVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 325 ~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
.+||.++..++++|++.++++|.+++
T Consensus 439 ~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 439 AIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred eEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 99999999999999999999998763
No 353
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.86 E-value=7.7e-20 Score=159.87 Aligned_cols=254 Identities=23% Similarity=0.300 Sum_probs=166.3
Q ss_pred ccCCChHHHHHHHH----HHHHhCCC---------CeEEcCCchHHHHHHHHHhhhh-------cC-----C-eEEecCC
Q 018240 33 VLMHDPTAFRLETE----MAKVMGKE---------AGLFVPSGTMGNLISVLVHCET-------RG-----S-EVILGDN 86 (359)
Q Consensus 33 ~~~~~~~~~~l~~~----la~~~~~~---------~~~~~~~gt~a~~~~l~~~~~~-------~g-----~-~vl~~~~ 86 (359)
.+..+|...++|+. +++++|.+ .++++++||++++.++.++..+ .+ + .|++++.
T Consensus 70 ~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~ 149 (373)
T PF00282_consen 70 TWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQ 149 (373)
T ss_dssp STTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETT
T ss_pred ccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccc
Confidence 45556777666665 56667877 2489999999999999887531 12 2 4778888
Q ss_pred CcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHH
Q 018240 87 SHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIA 166 (359)
Q Consensus 87 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~ 166 (359)
+|++..+ + +...|+.++.|+.++++.+|+++|++.+++..+. ..+.++++.+...+.+|.+ |++++|.++|
T Consensus 150 aH~S~~K-a--a~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~---g~~p~~vvat~Gtt~~Ga~---D~l~~i~~i~ 220 (373)
T PF00282_consen 150 AHYSIEK-A--ARILGLGVRKIPTDEDGRMDIEALEKALEKDIAN---GKTPFAVVATAGTTNTGAI---DPLEEIADIC 220 (373)
T ss_dssp S-THHHH-H--HHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHT---TEEEEEEEEEBS-TTTSBB----SHHHHHHHH
T ss_pred cccHHHH-h--cceeeeEEEEecCCcchhhhHHHhhhhhcccccc---cccceeeeccCCCcccccc---cCHHHHhhhc
Confidence 9999876 4 8888989999999999999999999998742211 2334445557777778886 5599999999
Q ss_pred HHcCcEEEEecccccchhhhcC-chhHhhhcCccEEEEeccccCCCcee-eEEec-CHHHHHHHH-HHHHhhC-------
Q 018240 167 KKHGLKLHIDGARIFNAAVALG-VPVRRLVQAADSASVCLSKGLGAPVG-SVIVG-SKEFIKKAR-RLRKTLG------- 235 (359)
Q Consensus 167 ~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~-~~~~~~~~~-~~~~~~~------- 235 (359)
+++++|++||.|++...+.... .....-...+|.+++++||+++.|.+ |+++. ++....... ....+.+
T Consensus 221 ~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~ 300 (373)
T PF00282_consen 221 EKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESD 300 (373)
T ss_dssp HHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-
T ss_pred cccceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccc
Confidence 9999999999996432232121 12222235889999999999999987 65554 554443311 0001111
Q ss_pred ---------CCcchhHHHHHHHHHHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEec
Q 018240 236 ---------GGMRQVGVLCAAALVAL----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEIT 297 (359)
Q Consensus 236 ---------~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~ 297 (359)
...+- ...+...+..+ .+...+..++..++++++.+.|++.+++++.. +...++++|+++
T Consensus 301 ~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~-~~~~~~vcFr~k 373 (373)
T PF00282_consen 301 ESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVN-EPDLNIVCFRYK 373 (373)
T ss_dssp GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESS-TTSSSEEEEEES
T ss_pred cccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEc-CCCceEEEEEeC
Confidence 11111 12222223333 24445588888899999999999998999865 458888888763
No 354
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.86 E-value=4e-19 Score=159.22 Aligned_cols=325 Identities=16% Similarity=0.191 Sum_probs=195.0
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCCccC-CChHHHHHHHHHHHHhC-CCCeEEcCCchHHHHHHHHHhhhh
Q 018240 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDDVLM-HDPTAFRLETEMAKVMG-KEAGLFVPSGTMGNLISVLVHCET 76 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~l~~~la~~~~-~~~~~~~~~gt~a~~~~l~~~~~~ 76 (359)
.++|||.++ +....+|.+.+++.+.......+. ..+...++.+.+++.++ .+...+++||++|+..+++.+..-
T Consensus 48 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~ 127 (431)
T PRK06209 48 NEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCNFTRPSAIELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAY 127 (431)
T ss_pred CEEEEccccccchhcCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHH
Confidence 357899876 344555899988887654332333 23334567888888874 356789999999999999988764
Q ss_pred cCCe-EEec-CCCccee---eccccccccCCc------cceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEecc
Q 018240 77 RGSE-VILG-DNSHIHI---YENGGISTIGGV------HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENT 145 (359)
Q Consensus 77 ~g~~-vl~~-~~~~~~~---~~~~~~~~~~g~------~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~ 145 (359)
.|.. |+.. ...|.+. +. +......+. .+..++.+ |++.+++.+++.. .++++|++++.
T Consensus 128 tgr~~i~~~~~~~~h~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~-----~~~aavi~Epv 196 (431)
T PRK06209 128 TGRDLVARCADHPFFSTDDWFI-GTTPMSAGIPASVSALTVTFRYN-----DIASLEALFEDHP-----GRIACVILEPA 196 (431)
T ss_pred hCCCeEEEeccCcccccccccc-ccCCCCCCCChhHhccccccCCC-----CHHHHHHHHHhCC-----CCEEEEEEccc
Confidence 5544 4332 1221110 10 000111111 11222322 8899999887421 46788999886
Q ss_pred ccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHh-hhcCccEEEEeccccCCCc-eeeEEecCHHH
Q 018240 146 HANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRR-LVQAADSASVCLSKGLGAP-VGSVIVGSKEF 223 (359)
Q Consensus 146 ~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~-~~~~~d~~~~s~~K~~g~~-~gg~~~~~~~~ 223 (359)
.. ...+.+++++|.++|++||+++|+||+|. |... .+..... +...+|+ .+++|.+|++ .+|.+++++++
T Consensus 197 ~g----~~~~~~~l~~l~~lc~~~g~lLI~DEv~t-G~~~-~~~g~~~~~gv~PDi--~t~gK~lggG~p~~av~~~~~i 268 (431)
T PRK06209 197 TA----DEPQDGFLHEVRRLCHENGALFILDEMIT-GFRW-HMRGAQKLYGIVPDL--SCFGKALGNGFAVSALAGKREY 268 (431)
T ss_pred cC----CCCCHHHHHHHHHHHHHcCCEEEEEcccc-cCCc-CcchhhHHhCCCcce--eeehhhhcCCcccEEEEEHHHH
Confidence 54 46678999999999999999999999983 3322 1111121 2224565 5667999753 23667778888
Q ss_pred HHH--HHHH--HH--hhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhc----CCCceEecCCccceE-
Q 018240 224 IKK--ARRL--RK--TLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQ----LKGLRVDVDAVETNI- 291 (359)
Q Consensus 224 ~~~--~~~~--~~--~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~----~~g~~~~~~~~~~~~- 291 (359)
.+. +... .. .++.++..++..++++..+++...+ ..+++..++.+++++.|++ . ++.......+..+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~-~~~~~vr~~G~~~~ 347 (431)
T PRK06209 269 MELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEH-GLQDHVRVSGRPCC 347 (431)
T ss_pred HhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeecceEE
Confidence 775 2111 11 1344555556777777777765433 2455666667777777655 3 3332111112222
Q ss_pred -EEEEec---cchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 292 -VYFEIT---EDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 292 -~~~~~~---~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
.++... .+.......+.+.|.++|+.+.+ ++++ ..++++++++++++++++++++.
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p~-----l~is--~~ht~~dId~~l~~l~~~l~~~~ 407 (431)
T PRK06209 348 LTYSTLDGNGQPSQAFRTLFLQETIRRGVLMPS-----LVVS--YAHGDADIERTIDAVHGALGVYR 407 (431)
T ss_pred EEEecCCcccCCcHHHHHHHHHHHHHCCccccc-----cccc--ccCCHHHHHHHHHHHHHHHHHHH
Confidence 222111 11111234677888899997622 3444 47899999999999999998874
No 355
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.83 E-value=4.3e-18 Score=139.52 Aligned_cols=340 Identities=21% Similarity=0.279 Sum_probs=236.6
Q ss_pred cccccCCCCCCh-HHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh----hcCC
Q 018240 5 TVDLRSDTVTKP-TEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE----TRGS 79 (359)
Q Consensus 5 ~id~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~----~~g~ 79 (359)
.||+-+|+-+.. +.....+|.. ++..|+.+.....|...+.+.||.+..+-+..|..|-...+..++. .+|.
T Consensus 48 ~IDLLTDSGTgams~~qwaamm~---GDEAYagsrs~~~L~~avkdifGfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~ 124 (471)
T COG3033 48 FIDLLTDSGTGAMTDKQWAAMMR---GDEAYAGSRSYYALADAVKDIFGFQYTIPTHQGRGAENILIPILIKKGEQEPGS 124 (471)
T ss_pred EEEeeccCCcccccHHHHHHHhc---cchhhcccccHHHHHHHHHHhcCceeeeeccCCccHHHHHHHHHhhhccccCCc
Confidence 478888766654 4777778776 7778999999999999999999999888888886665554444442 3566
Q ss_pred eEEecCCCcceeeccccccccCCccceeeecCC----------CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC
Q 018240 80 EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ----------DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC 149 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----------~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p 149 (359)
+.++++..|+.+.. +..+..|..++.+..++ .|.+|++.|++.|++. +..++..|++.-+.|..
T Consensus 125 ~~~~~sN~~FdTTr--~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidev----G~~nvp~I~~tiT~Nsa 198 (471)
T COG3033 125 KMVAFSNYHFDTTR--GHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEV----GADNVPYIVLTITNNSA 198 (471)
T ss_pred cccccccceecchh--HHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHh----CcccCcEEEEEEecccc
Confidence 77888889888877 45777777777664332 2788999999999963 22456677776677778
Q ss_pred CceecChhhHHHHHHHHHHcCcEEEEecccccchh--------hhcCchhHhh----hcCccEEEEeccccCCCceeeEE
Q 018240 150 GGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAA--------VALGVPVRRL----VQAADSASVCLSKGLGAPVGSVI 217 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~--------~~~~~~~~~~----~~~~d~~~~s~~K~~g~~~gg~~ 217 (359)
+|+..+.+.++++.++|++|+++++.|.++-.-.. .+.+.+..++ ...+|-+++|.-|---.+.||++
T Consensus 199 gGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmGGfl 278 (471)
T COG3033 199 GGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMGGFL 278 (471)
T ss_pred CCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccccEE
Confidence 89999999999999999999999999977521111 1223344333 25789999999998777889988
Q ss_pred ecCHH----HHHHHHHHHHh-hCCCc--chhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcCCCceEecCCccc
Q 018240 218 VGSKE----FIKKARRLRKT-LGGGM--RQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQLKGLRVDVDAVET 289 (359)
Q Consensus 218 ~~~~~----~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~ 289 (359)
+.+++ +...++..... .|..+ .+.+-.+.+...+|.+..+ +.++...+..++|.+.|.+. |+.+.. |.++
T Consensus 279 ~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~Qv~YL~~~l~~~-GVpi~~-paGG 356 (471)
T COG3033 279 CFKDDSFFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVAQVQYLADGLEEA-GVPIVQ-PAGG 356 (471)
T ss_pred EecCccHHHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhc-CCeeEe-cCCC
Confidence 87544 44454433221 11111 1233344444445544432 46666778889999999999 998754 4566
Q ss_pred eEEEEEecc------chHHHHHHHHHHH-HhcCceeccCC-----------------CcEEEEEe-CCCCCHHHHHHHHH
Q 018240 290 NIVYFEITE------DSKLYAACLLKKL-EEHGVLVMPES-----------------STRVRIVV-HHQISANDVHYTLS 344 (359)
Q Consensus 290 ~~~~~~~~~------~~~~~~~~~~~~l-~~~gi~~~~~~-----------------~~~lRi~~-~~~~~~~~i~~~~~ 344 (359)
.-+++.... .+...++.|..+| ++.||..+..| ...+|+.+ ....+.+++|.+++
T Consensus 357 Havfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~ 436 (471)
T COG3033 357 HAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIE 436 (471)
T ss_pred ceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHH
Confidence 666665421 1234677888888 88999874321 13589885 33568899999999
Q ss_pred HHHHHHHHHHh
Q 018240 345 CFQKIYAGVCE 355 (359)
Q Consensus 345 ~l~~~~~~~~~ 355 (359)
.++++.+.-.+
T Consensus 437 a~~~l~e~~~~ 447 (471)
T COG3033 437 AFKALKENAED 447 (471)
T ss_pred HHHHHHhcccc
Confidence 99988876543
No 356
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.83 E-value=2e-18 Score=150.01 Aligned_cols=305 Identities=13% Similarity=0.118 Sum_probs=203.5
Q ss_pred HH-HHHHHHcCCCCCCccC--CChHHHHHHHHHHHHhCCC--C-e-EEcCCchHHHHHHHHHhhhhcCCeEEecCCCcce
Q 018240 18 EA-MRAAMASAEVDDDVLM--HDPTAFRLETEMAKVMGKE--A-G-LFVPSGTMGNLISVLVHCETRGSEVILGDNSHIH 90 (359)
Q Consensus 18 ~~-~~~a~~~~~~~~~~~~--~~~~~~~l~~~la~~~~~~--~-~-~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~ 90 (359)
|. .++++.+...+....+ ......++++.+.++++.+ + + ++..|||.++.+++..++.++|+++++.. . ++
T Consensus 16 ~~~~~~~~~~~~~~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~-FG 93 (374)
T TIGR01365 16 PGWSIEELKNAPLGRSHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-S-FG 93 (374)
T ss_pred chhhHHHHhhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-H-HH
Confidence 66 7777776554433222 2455678889999999974 2 2 56788999999999999844788888754 3 44
Q ss_pred eeccccccccCCc-cceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc
Q 018240 91 IYENGGISTIGGV-HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH 169 (359)
Q Consensus 91 ~~~~~~~~~~~g~-~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~ 169 (359)
......+++..|+ ++..+..+....+++++++. + .. |++ ..+.+.||+..|. +++.+.. +
T Consensus 94 ~r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~--~--------~~---v~~-vhnETSTGv~npv---~~i~~~~--~ 154 (374)
T TIGR01365 94 KGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDF--K--------ND---VVF-TWNGTTSGVRVPN---GDFIPAD--R 154 (374)
T ss_pred HHHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCC--C--------CC---EEE-ecCCCchheeccc---ccccccc--C
Confidence 3321135677888 47777666666778888872 2 22 344 4566689999884 4444222 5
Q ss_pred CcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHH------H----------
Q 018240 170 GLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLR------K---------- 232 (359)
Q Consensus 170 ~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~------~---------- 232 (359)
+.++|+|.+.++|... ..+. ..|+++.|..|++++|.| ++++.+++.+++.+... .
T Consensus 155 ~~lliVDavSs~g~~~---l~~d----~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~ 227 (374)
T TIGR01365 155 EGLTICDATSAAFAQD---LDYH----KLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKL 227 (374)
T ss_pred CCcEEEEccchhcCCC---CChh----HCcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccch
Confidence 8999999987666543 2222 489999999999999999 88888888877655211 0
Q ss_pred ---hh-CCCcchhHHHHH-HHHHHH----HH-hHHHHhhhHHHHHHHHHHHHhcCCC-ceEecC--CccceE-EEEEecc
Q 018240 233 ---TL-GGGMRQVGVLCA-AALVAL----QE-NVLVMLDGDHKKAKLLAEGLNQLKG-LRVDVD--AVETNI-VYFEITE 298 (359)
Q Consensus 233 ---~~-~~~~~~~~~~~~-~~~~~l----~~-~~~~~~~~~~~~~~~l~~~l~~~~g-~~~~~~--~~~~~~-~~~~~~~ 298 (359)
.. +.+...++.... +...++ ++ .++.+.+++.++++.++++++++ | +.+... ...++. ..+.++.
T Consensus 228 ~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~l-g~l~~~~~~~~~rS~tvt~v~~~~ 306 (374)
T TIGR01365 228 NKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKN-NWIHFLAETPEIRSNTSVCLKVVD 306 (374)
T ss_pred hhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCChhhcCCCeEEEEeCC
Confidence 01 112222222222 223333 22 57778889999999999999999 7 666432 223443 3345433
Q ss_pred c--------hHHH-HHHHHHHHHhcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 299 D--------SKLY-AACLLKKLEEHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 299 ~--------~~~~-~~~~~~~l~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
+ ..++ ..++.+.|+++||.+.++. +..+||.....++.+|++.+++.|+=+..
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 307 PAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred ccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence 1 1122 5889999999999886552 36799998889999999999999986654
No 357
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=3e-19 Score=147.73 Aligned_cols=335 Identities=16% Similarity=0.194 Sum_probs=237.1
Q ss_pred ccccccCCCCCChH--HHHHHHH----HcCCCC----CCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHh
Q 018240 4 RTVDLRSDTVTKPT--EAMRAAM----ASAEVD----DDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~~~~--~~~~~a~----~~~~~~----~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~ 73 (359)
..+||+|.|+..-. +++++.. .+.-.+ ...|+.-..+.+++..|++++|.+..++++.|-.++..++.+.
T Consensus 95 ~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E~aivYs~gF~ti~S~ipaf 174 (467)
T KOG1358|consen 95 DVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTEDAIVYSYGFSTIESAIPAF 174 (467)
T ss_pred eeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCcceeeeccccchhhhcchhh
Confidence 45788888876322 4444444 332111 1237777788999999999999999999999999999999999
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCC-CccCCc----eeEEEEeccccC
Q 018240 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKG-EIVYPT----TRLICLENTHAN 148 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~-~~~~~~----~~~v~i~~~~~~ 148 (359)
+ ++||-+.+.+..++...+ | .++..-.++++.++ |.+++++.+.+... ....++ .+.|+++....
T Consensus 175 s-KrGDIi~~de~~nfaIq~-G--lqlSRS~i~~Fkhn-----dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~- 244 (467)
T KOG1358|consen 175 S-KRGDIIFVDEAVNFAIQK-G--LQLSRSTISYFKHN-----DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYA- 244 (467)
T ss_pred h-ccCcEEEEehhhhHHHHH-H--HhhhhheeEEecCC-----CHHHHHHhccCcchhhhhccccccceEEEEEEeecc-
Confidence 9 599999999988887665 5 66777677777776 88899888776431 111112 45677888888
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh----cCccEEEEeccccCCCceeeEEecCHHHH
Q 018240 149 CGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV----QAADSASVCLSKGLGAPVGSVIVGSKEFI 224 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~----~~~d~~~~s~~K~~g~~~gg~~~~~~~~~ 224 (359)
++|.+.| +.+|.++..+|-..+|.|+..++|..+..|....+.. ...|+++.|+.-.++. .||+.+++.-..
T Consensus 245 N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas-~GgFc~G~~~i~ 320 (467)
T KOG1358|consen 245 NTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALAS-GGGFCAGKSFIA 320 (467)
T ss_pred CCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccc-cCceeecceeeE
Confidence 5899888 8999999999999999999999999887666544432 3667888888887774 667777754444
Q ss_pred HHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH--HHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccch--
Q 018240 225 KKARRLRKTLGGGMRQVGVLCAAALVALQENV--LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDS-- 300 (359)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-- 300 (359)
+.-+.-...+-...+.++.++.++..++.... .++.+........+.+.|+...++.+.. ...++++.+.+....
T Consensus 321 ~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~-~~~SPi~hl~l~~~~~s 399 (467)
T KOG1358|consen 321 DHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSNSGFIVSG-SPESPIIHLQLERSYGS 399 (467)
T ss_pred eeeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhhhcCCceEEec-CcCCceeeeeecccccc
Confidence 33221112222223345677777777664332 2356667777778888888877788754 458888888876521
Q ss_pred ----HHHHHHHHHHHHhcCceeccC----------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 301 ----KLYAACLLKKLEEHGVLVMPE----------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 301 ----~~~~~~~~~~l~~~gi~~~~~----------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
..-.++++++...+|+.+... -+..+||+++..+++++++++.+.|++....+
T Consensus 400 ~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~~ 466 (467)
T KOG1358|consen 400 REKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASAV 466 (467)
T ss_pred hHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHhh
Confidence 123445666664458877321 23479999999999999999999999887653
No 358
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.82 E-value=1.6e-17 Score=138.88 Aligned_cols=337 Identities=16% Similarity=0.142 Sum_probs=194.6
Q ss_pred cccccccCCC----CCChHHHHHHHHHcCCCC--CCccCC-ChHHHHHHHHHHHHh---CCCCeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSDT----VTKPTEAMRAAMASAEVD--DDVLMH-DPTAFRLETEMAKVM---GKEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~----~~~~~~~~~~a~~~~~~~--~~~~~~-~~~~~~l~~~la~~~---~~~~~~~~~~gt~a~~~~l~~ 72 (359)
.++|||.++- +...+|++.+++.+.... +...++ .....++++.+.+.. ..+.+.++.|||+|++.||..
T Consensus 56 ~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~ 135 (433)
T KOG1401|consen 56 KEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANETALKF 135 (433)
T ss_pred ceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHH
Confidence 4689999872 223349999999875433 221111 222667788888888 555678999999999999999
Q ss_pred hhhhc-----CC--eEE-ecCCCcceeeccccccccCCccceeeec---CCC----CCCCHHHHHHHhcCCCCCccCCce
Q 018240 73 HCETR-----GS--EVI-LGDNSHIHIYENGGISTIGGVHPRTVKN---NQD----GTMDIDLIEAAIRDPKGEIVYPTT 137 (359)
Q Consensus 73 ~~~~~-----g~--~vl-~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~----~~~~~~~l~~~l~~~~~~~~~~~~ 137 (359)
++... .+ +++ +.+.+|....- + ....+......+. .++ -.-|..++++.++.+. ..+
T Consensus 136 Ark~~~~~~~~~~t~~Iaf~nsyHG~tlg--a-ls~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~-----~~I 207 (433)
T KOG1401|consen 136 ARKFTGKKHPEKKTKFIAFENSYHGRTLG--A-LSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHK-----GEI 207 (433)
T ss_pred HHHhhcccCCccceeEEEEecCcCCcchh--H-HHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCC-----Cce
Confidence 87411 11 255 55555554442 2 2211222222211 011 0117899999999632 358
Q ss_pred eEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eE
Q 018240 138 RLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SV 216 (359)
Q Consensus 138 ~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~ 216 (359)
.+|++++...+.+-..++.+++..|+++|+++|+++|.||++........+....-+...+|+. ++.|.++++.- |+
T Consensus 208 aAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~--t~aK~L~gGlPigA 285 (433)
T KOG1401|consen 208 AAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDIT--TVAKPLGGGLPIGA 285 (433)
T ss_pred EEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCcce--eehhhccCCceeEE
Confidence 9999999998543345677999999999999999999999964322221111222222345644 56688854333 55
Q ss_pred EecCHHHHHHHHHHH-HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHH----HHHHHHHHhcCCCceEecCCccce
Q 018240 217 IVGSKEFIKKARRLR-KTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKK----AKLLAEGLNQLKGLRVDVDAVETN 290 (359)
Q Consensus 217 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~----~~~l~~~l~~~~g~~~~~~~~~~~ 290 (359)
..+++++.+.+..-. -..|++++.+++.+.++...++...+ +.+++.... ++.+.+.+.+.+.... ..-..+.
T Consensus 286 ~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~-g~~grgl 364 (433)
T KOG1401|consen 286 TGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSIC-GGVGRGL 364 (433)
T ss_pred EeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCcee-eeeeeEE
Confidence 667888888875322 24577777788888888888854432 233444444 4444444444322211 1122444
Q ss_pred EEEEEeccchHHHHHHHHHHHHhcCceeccCC----CcEEEEEe----CCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 291 IVYFEITEDSKLYAACLLKKLEEHGVLVMPES----STRVRIVV----HHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~----~~~lRi~~----~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
++.+.+..+ ...+.+..++.|..+.+++ .+.+|+.+ ...+++|.++++++++.+.++++.
T Consensus 365 ~ig~~~~~p----~~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P~~~l~~~~~~E~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 365 VIGFEFEGP----VYKFADAAREQGLLILTLGKGLLEEGVRIAPIYLLTVEHTPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred EEEEEEeec----hhhhhhhhhhhhHHHHHHhcccccceEEEeccccccccCcHHHHHHHHHHHHHHHHHhc
Confidence 555554432 1122222222222221111 12344433 213458889999999988887653
No 359
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.82 E-value=4.1e-17 Score=135.41 Aligned_cols=333 Identities=18% Similarity=0.178 Sum_probs=205.9
Q ss_pred cccccccCCC----CCChHHHHHHHHHcCCCC--CC--ccCCChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHH
Q 018240 3 TRTVDLRSDT----VTKPTEAMRAAMASAEVD--DD--VLMHDPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~----~~~~~~~~~~a~~~~~~~--~~--~~~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~ 72 (359)
.+++|+.++. ....+|++.+++.+.... +. .|. .+...++.+.+.+.+..+ ...|++||++|+..+++.
T Consensus 50 ~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~~-~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~m 128 (442)
T KOG1404|consen 50 RRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGYL-NPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKM 128 (442)
T ss_pred ceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeecccc-CCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHH
Confidence 4678888873 346679999999886532 11 233 455677777777777554 358899999999999999
Q ss_pred hhhhcCC-eEE-ecCCCcceeeccccccccCCccceee--------------ecCCCCCC--C-----HHHHHHHhcCCC
Q 018240 73 HCETRGS-EVI-LGDNSHIHIYENGGISTIGGVHPRTV--------------KNNQDGTM--D-----IDLIEAAIRDPK 129 (359)
Q Consensus 73 ~~~~~g~-~vl-~~~~~~~~~~~~~~~~~~~g~~~~~v--------------~~~~~~~~--~-----~~~l~~~l~~~~ 129 (359)
+..-.+. +++ ..+.+|..... .+.+.+...... |....+.+ + .+.+.+.+++..
T Consensus 129 ar~Yt~~~diIa~r~~YHG~t~~---t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i 205 (442)
T KOG1404|consen 129 ARLYTGNLDIIARRNSYHGNTLY---TLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLI 205 (442)
T ss_pred HHHhcCCceEEEeeccccCCchh---hcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHH
Confidence 8753332 344 55555554432 133333322221 11111100 1 233333333221
Q ss_pred CCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh---cCccEEEEec
Q 018240 130 GEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV---QAADSASVCL 205 (359)
Q Consensus 130 ~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~ 205 (359)
.......+++++.++.... +|+ .++..++++..++|+++|.++|.||++...... | .+..+. -.+| +.++
T Consensus 206 ~~~~~~~vAafiaEtIqGv-gG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRt--G-~~wgfe~h~v~PD--IvTm 279 (442)
T KOG1404|consen 206 LYDGPETVAAFIAETIQGV-GGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRT--G-HMWGFESHGVVPD--IVTM 279 (442)
T ss_pred HhcCCCceeEEEeehhccC-CccccCCchHHHHHHHHHHHcCCEEEehhhhhccccc--c-ccccccccCCCcc--HHHH
Confidence 1122246888999998884 455 467799999999999999999999998554333 4 333332 1234 3478
Q ss_pred cccCCCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHH-HhhhHHHHHHHHHHHHhcCC-CceE
Q 018240 206 SKGLGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLV-MLDGDHKKAKLLAEGLNQLK-GLRV 282 (359)
Q Consensus 206 ~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~l~~~l~~~~-g~~~ 282 (359)
.|.+|.... |.++..+++.+.+.+... +..++...+..++++...++-..++ ..++..+...+|.+.|.++. ..++
T Consensus 280 AKgiGnG~Pl~AVvtt~EIa~v~~~~~~-~fnTyggnP~a~avg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~i 358 (442)
T KOG1404|consen 280 AKGIGNGFPLGAVVTTPEIADVLNQKSS-HFNTYGGNPVACAVGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKHPI 358 (442)
T ss_pred HhhccCCCcceeeecCHHHHHHHHhccc-cccccCCCchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 888864332 446677788887764432 3344445667777778777654443 44556677888888888751 2222
Q ss_pred ecC-CccceEEEEEeccc-------hHHHHHHHHHHHHhcCceeccC--CCcEEEEEeCCCCCHHHHHHHHHHH
Q 018240 283 DVD-AVETNIVYFEITED-------SKLYAACLLKKLEEHGVLVMPE--SSTRVRIVVHHQISANDVHYTLSCF 346 (359)
Q Consensus 283 ~~~-~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~gi~~~~~--~~~~lRi~~~~~~~~~~i~~~~~~l 346 (359)
+.+ +..+-++-+.+..+ .......+.+.+++.|+.+-.+ ....+||.++.+.|++|++.+++..
T Consensus 359 IGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 359 IGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred eeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccceEEEecCCeeccHHHHHHHHHHH
Confidence 211 33455555555331 1124557888889999999433 2347999999999999998777766
No 360
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.81 E-value=8.4e-19 Score=138.09 Aligned_cols=165 Identities=30% Similarity=0.422 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHh--CCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCC
Q 018240 40 AFRLETEMAKVM--GKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMD 117 (359)
Q Consensus 40 ~~~l~~~la~~~--~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 117 (359)
..++++.+++++ +.+..+++++|++|+..++..+. +++++|+++++.|++... ......|.+++.++.+.++..+
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~-~~~~~v~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~ 78 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALL-GPGDEVIVDANGHGSRYW--VAAELAGAKPVPVPVDDAGYGG 78 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhC-CCCCEEEEeecccceehh--hHHHhcCCEEEEeccCCCCccc
Confidence 468899999999 77777899999999999999998 478999999999988873 2367788899988766554333
Q ss_pred HH--HHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 118 ID--LIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 118 ~~--~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
.+ .+++.... .++++++++++. |++|...+ +++|.++|+++|+++|+|++|..+...... .....
T Consensus 79 ~~~~~~~~~~~~-------~~~~~v~~~~~~-~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~~--~~~~~ 145 (170)
T cd01494 79 LDVAILEELKAK-------PNVALIVITPNT-TSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPAPG--VLIPE 145 (170)
T ss_pred hhhhhhhhcccc-------CceEEEEEecCc-CCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccccc--ccccc
Confidence 32 44443332 678899885555 48888877 589999999999999999998665554211 11122
Q ss_pred cCccEEEEeccccCCCceeeEEecC
Q 018240 196 QAADSASVCLSKGLGAPVGSVIVGS 220 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~~gg~~~~~ 220 (359)
.++|+++.|++|+|+++.+|+++.+
T Consensus 146 ~~~d~~~~s~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 146 GGADVVTFSLHKNLGGEGGGVVIVK 170 (170)
T ss_pred ccCCEEEEEcccccCCCceEEEEeC
Confidence 4789999999999998666887653
No 361
>PLN02452 phosphoserine transaminase
Probab=99.81 E-value=2.5e-17 Score=143.21 Aligned_cols=316 Identities=13% Similarity=0.144 Sum_probs=199.4
Q ss_pred cccccCCCCCChHHHHHHHHHcCCC------------CCCccCCChHHHHHHHHHHHHhCCCC---e-EEcCCchHHHHH
Q 018240 5 TVDLRSDTVTKPTEAMRAAMASAEV------------DDDVLMHDPTAFRLETEMAKVMGKEA---G-LFVPSGTMGNLI 68 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~------------~~~~~~~~~~~~~l~~~la~~~~~~~---~-~~~~~gt~a~~~ 68 (359)
.++|..+....| ++|++++.+... ++..-.......++++.+.++++.+. + ++..|||.++.+
T Consensus 8 ~~~f~pGP~~lp-~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea 86 (365)
T PLN02452 8 VFNFSAGPATLP-ANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAA 86 (365)
T ss_pred eEeeeCCCCCCC-HHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHH
Confidence 455655444443 777777776421 11111123556888899999999853 3 445778889999
Q ss_pred HHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCC---CCCHHHHHHHhcCCCCCccCCceeEEEEecc
Q 018240 69 SVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDG---TMDIDLIEAAIRDPKGEIVYPTTRLICLENT 145 (359)
Q Consensus 69 ~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~---~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~ 145 (359)
++..++. +|+++++.....++... ...++..|...+........ .+++++++ .+ ++.+.|.+ ..
T Consensus 87 ~~~nl~~-~~~~~l~~~~G~fg~r~-~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~--------~~~~~v~~-~h 153 (365)
T PLN02452 87 IPLNLCK-PGDKADFVVTGSWSKKA-AKEAKKYCKTNVIASGKDEKYTKIPSVSEWE--LT--------PDAKFVHI-CA 153 (365)
T ss_pred HHHhcCC-CCCeEEEEECCHHHHHH-HHHHHHhCCCcEEEecCCCCCCCCCChHHcC--CC--------CCCcEEEE-CC
Confidence 9999884 78877765555555432 24566677544333211221 34666542 12 46778888 55
Q ss_pred ccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHH
Q 018240 146 HANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFI 224 (359)
Q Consensus 146 ~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~ 224 (359)
+++.||+.+. +++++. ++++++|.+++++... ..+..+ +++..|.+|++| |.| |+++.+++++
T Consensus 154 nETstGv~~~--~~~~i~------~~~lvVDa~Ss~g~~p---idv~~~----~v~~~saqK~lG-P~Gl~~v~vr~~~l 217 (365)
T PLN02452 154 NETIHGVEFK--DYPDVG------NVPLVADMSSNFLSKP---VDVSKY----GVIYAGAQKNVG-PSGVTIVIIRKDLI 217 (365)
T ss_pred CCCCCcEecC--cccccC------CCeEEEECCccccCcc---cCHHHc----CEEEEecccccC-CCCeEEEEEcHHHH
Confidence 7779999633 244443 3899999998775543 333333 344569999998 777 9999998888
Q ss_pred HHHHHHHH-h--------hCCCcchhHHH-HHHH---HHHHHH--hHHHHhhhHHHHHHHHHHHHhcCCCceEe-cC-C-
Q 018240 225 KKARRLRK-T--------LGGGMRQVGVL-CAAA---LVALQE--NVLVMLDGDHKKAKLLAEGLNQLKGLRVD-VD-A- 286 (359)
Q Consensus 225 ~~~~~~~~-~--------~~~~~~~~~~~-~~~~---~~~l~~--~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~-~- 286 (359)
++...... . .+.....++.. ..+. +..+.+ .++.+.++.++++++|++.|++.+|+-.. .. .
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~ 297 (365)
T PLN02452 218 GNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSV 297 (365)
T ss_pred hhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHH
Confidence 76432111 0 01111112211 1122 223332 46667788889999999999997777211 11 1
Q ss_pred ccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCC--cEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 287 VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESS--TRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~--~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.....+.|.++.. ...++|.+.++++|+...+|.+ +.+|+++...++.++++.+++.+++.-++
T Consensus 298 rs~~~vsF~~~~~--~~~~~f~~~~~~~g~~~~~G~r~~gg~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 298 RSLMNVPFTLGGS--ELEAEFVKEAAKAGMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred hCCeEEEEEcCCc--hhHHHHHHHHHHCCCcccCCccccCceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 1233567777763 3778999999999999977642 34999998899999999999999877654
No 362
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.81 E-value=5.6e-17 Score=153.16 Aligned_cols=337 Identities=16% Similarity=0.135 Sum_probs=203.7
Q ss_pred ccccccCC----CCC-ChHHHHHHHHHcCCCCCCc--c--CCChHHHHHHHHHHHHhCC---CCeEEcCCchHHHHHHHH
Q 018240 4 RTVDLRSD----TVT-KPTEAMRAAMASAEVDDDV--L--MHDPTAFRLETEMAKVMGK---EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 4 ~~id~~~~----~~~-~~~~~~~~a~~~~~~~~~~--~--~~~~~~~~l~~~la~~~~~---~~~~~~~~gt~a~~~~l~ 71 (359)
+++|+.++ +.. ..+|++.+++.++...... + ...+...+|.+.|.+..+. +.+++++||++|++.|++
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlK 445 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALK 445 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHH
Confidence 57888876 333 2368899998875543221 1 1345667788888886652 356889999999999999
Q ss_pred Hhhh-h-------------------cCCeEEec-CCCcceeeccccccccCCc--------c------ceeeecCC----
Q 018240 72 VHCE-T-------------------RGSEVILG-DNSHIHIYENGGISTIGGV--------H------PRTVKNNQ---- 112 (359)
Q Consensus 72 ~~~~-~-------------------~g~~vl~~-~~~~~~~~~~~~~~~~~g~--------~------~~~v~~~~---- 112 (359)
.++. - ...+|+.- ..+|+.+.- + ....+. . ...++.+.
T Consensus 446 mA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~G--A-ms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~ 522 (817)
T PLN02974 446 MAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLG--A-MEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMR 522 (817)
T ss_pred HHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHH--H-HhhCCchhhhcccccccccCCCcccCCCccccc
Confidence 8842 0 12346644 445544432 1 111110 0 00111000
Q ss_pred ----------CC-----------C-----CC------------HHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee-
Q 018240 113 ----------DG-----------T-----MD------------IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC- 153 (359)
Q Consensus 113 ----------~~-----------~-----~~------------~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~- 153 (359)
.+ . ++ .+.+++.|++.....+..++.+|++++.....+|+.
T Consensus 523 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~ 602 (817)
T PLN02974 523 NGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLL 602 (817)
T ss_pred cccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCccc
Confidence 00 0 00 245666665311111125789999999633245775
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH--hhhcCccEEEEeccccCCCce-e-eEEecCHHHHHHHHH
Q 018240 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR--RLVQAADSASVCLSKGLGAPV-G-SVIVGSKEFIKKARR 229 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~~d~~~~s~~K~~g~~~-g-g~~~~~~~~~~~~~~ 229 (359)
++.+++++++++|++||+++|+||++... +..|.... .+...+|++ .++|.++++. . |.+++++++.+.+..
T Consensus 603 ~~~~yl~~lr~lc~~~gilLI~DEV~TGf--GRtG~~fa~e~~gv~PDIi--~~gKgLtgG~~Plaa~l~~~~I~~~f~~ 678 (817)
T PLN02974 603 IDPLFQRALVQVCRSRKIPVIFDEVFTGL--WRLGVESAWELLGCKPDIA--CYAKLLTGGLVPLAATLATEEVFEAFRG 678 (817)
T ss_pred CCHHHHHHHHHHHHHhCCEEEEeecccCC--CcccchhhHHhcCCCCCEE--eecccccCCCCccEEEEEcHHHHHhhcc
Confidence 56799999999999999999999996432 22343222 222346666 4558775431 2 557778888887642
Q ss_pred H----HHhhCCCcchhHHHHHHHHHHHHHhHH-----HHhhhHHHHHHHHHHHH----hcCCCceEecCCccceEEEEEe
Q 018240 230 L----RKTLGGGMRQVGVLCAAALVALQENVL-----VMLDGDHKKAKLLAEGL----NQLKGLRVDVDAVETNIVYFEI 296 (359)
Q Consensus 230 ~----~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~l~~~l----~~~~g~~~~~~~~~~~~~~~~~ 296 (359)
- ....+.++...++.++++...++...+ ...++..+..+++.+.| ++.|.+.-. ...+.++.+.+
T Consensus 679 ~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~V--Rg~Gl~~~iel 756 (817)
T PLN02974 679 PSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERV--VSLGTVLALEL 756 (817)
T ss_pred ccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE--EeeeeEEEEEE
Confidence 1 113567777788889999888865443 22333334444444444 445444322 23566666666
Q ss_pred ccch---H---HHHHHHHHHHH-hcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 297 TEDS---K---LYAACLLKKLE-EHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 297 ~~~~---~---~~~~~~~~~l~-~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
..+. + ..+..+.+.+. ++|+.+.+.+ +.+++.+++.++++++++++++|.+.+
T Consensus 757 ~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~G-nvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 757 DAEGSGSGYSSLYARSVVRRLRREDGIYARPLG-NVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred ecCCcccccchHHHHHHHHHHHHhCCEEEEecC-CEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 4321 1 12456778887 9999998865 689998888999999999999998765
No 363
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.81 E-value=2.8e-17 Score=145.27 Aligned_cols=295 Identities=19% Similarity=0.172 Sum_probs=192.3
Q ss_pred CChHHHHHHHHHHHHhCCCCeEEcCCchH-HHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCC-
Q 018240 36 HDPTAFRLETEMAKVMGKEAGLFVPSGTM-GNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQD- 113 (359)
Q Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~-a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~- 113 (359)
......+.++..++.||.++..|+.|||+ |+..++.+.+ .+||.|++++++|.|... + .-+.|+.++++....+
T Consensus 68 p~G~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~-~~GD~VLvdRN~HKSi~~-g--lilaGa~Pvyl~p~~np 143 (557)
T COG1982 68 PEGPIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVL-TPGDKVLVDRNCHKSIHH-G--LILAGATPVYLEPSRNP 143 (557)
T ss_pred CCccHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhc-CCCCEEEecCCccHHHHH-H--HHHcCCceEEecCCCCc
Confidence 34557899999999999999988887775 5556666666 699999999999999887 4 7788999999844333
Q ss_pred -----CCCCHHHHHHHhcCCCCCccCCce-eEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc
Q 018240 114 -----GTMDIDLIEAAIRDPKGEIVYPTT-RLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL 187 (359)
Q Consensus 114 -----~~~~~~~l~~~l~~~~~~~~~~~~-~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~ 187 (359)
+.++.+.+++.+.++ +.. +++++.++. ..|++++ +++|.+.++.+++|+.+|++|....-...
T Consensus 144 ~~gi~ggI~~~~~~~~l~~~------~~~~k~~vitnpT--YdGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~ 212 (557)
T COG1982 144 LYGIIGGIPLETFKEALLAH------PDAEKLAVITNPT--YDGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSP 212 (557)
T ss_pred cccccCCCCHHHHHHHHHhC------hhhheeEEEecCc--cceEeec---HHHHHHHHhhcCceEEhhhcCcccccccc
Confidence 678999999999875 333 667774444 4699998 79999999999999999999755433222
Q ss_pred CchhHhhhcCccEEEEeccccCCCcee-eEEecCH--HH-HHHHHHHHHhhCCCcchhHHHHHHHHHHH-------HHhH
Q 018240 188 GVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSK--EF-IKKARRLRKTLGGGMRQVGVLCAAALVAL-------QENV 256 (359)
Q Consensus 188 ~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-------~~~~ 256 (359)
..+-.....++|+++.|.||.+++... +.+-.+. .+ .++++..-.... ++|++..+.+....+- +...
T Consensus 213 ~l~~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~-STSPsY~l~ASlD~Ar~~~~~~G~~l~ 291 (557)
T COG1982 213 MLPESALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMHQ-STSPSYPLMASLDVARMQEGNAGRELW 291 (557)
T ss_pred cCcchhhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHHc-cCCchHHHHHHHHHHHHhhhhhhHHHH
Confidence 122222224788999999999976544 5555442 11 122222222222 2333333333332221 1111
Q ss_pred HHHhhhHHHHHHHHHHHHhcCCCceEecCCc--------------------cceEEEEEeccchHHHHHHHHHHHHhcCc
Q 018240 257 LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV--------------------ETNIVYFEITEDSKLYAACLLKKLEEHGV 316 (359)
Q Consensus 257 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi 316 (359)
++..++..+.++.+++...+++++.++.++. +..-+.+..+. .|+.+..+.++|+++||
T Consensus 292 ~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~-~Gipg~~v~~~L~e~gi 370 (557)
T COG1982 292 QEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPE-FGIPGAIVAKYLREHGI 370 (557)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCC-CCCcHHHHHHHHHHcCC
Confidence 2234556677788888888876676654432 11123444443 57899999999999999
Q ss_pred eeccCCCcEEEEEeCCC--CCHHHHHHHHHHHH
Q 018240 317 LVMPESSTRVRIVVHHQ--ISANDVHYTLSCFQ 347 (359)
Q Consensus 317 ~~~~~~~~~lRi~~~~~--~~~~~i~~~~~~l~ 347 (359)
.....+...+-+.+++. ....+++.+++..+
T Consensus 371 i~e~~~d~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 371 IPEETGDYSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred eeeecCCceeeEEeeeccchHHHHHHHHHHHHH
Confidence 99777766655555433 34445555555444
No 364
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.80 E-value=4.5e-17 Score=156.39 Aligned_cols=274 Identities=16% Similarity=0.168 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHhCCCCe--EEcCCchHHHHHHHHHhhhhc--CCeEEecCCCcceeeccc-cccccCCccceeeecCCCC
Q 018240 40 AFRLETEMAKVMGKEAG--LFVPSGTMGNLISVLVHCETR--GSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDG 114 (359)
Q Consensus 40 ~~~l~~~la~~~~~~~~--~~~~~gt~a~~~~l~~~~~~~--g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 114 (359)
..++++.++++.|.+.. .++.++|.+...++.+...++ +++|++++..|++..... ..++..|++++.++.+.+.
T Consensus 123 l~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d~ 202 (954)
T PRK05367 123 LLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKAL 202 (954)
T ss_pred HHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccCC
Confidence 35677889999999854 788888888887777765444 389999999998766310 1245678898888754311
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh
Q 018240 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
+ + .++.++++ +.++ .+|.+.+ +++|+++|+++|+++++|..+..... ..+..++
T Consensus 203 --~--------~--------~~~~~vlv-q~p~-~~G~i~d---~~~i~~~ah~~Gal~~vda~~~Al~~---l~~pge~ 256 (954)
T PRK05367 203 --D--------H--------DDVFGVLL-QYPG-TSGEVRD---YTALIAAAHARGALVAVAADLLALTL---LTPPGEM 256 (954)
T ss_pred --C--------c--------ccEEEEEE-ecCC-CCeeecc---HHHHHHHHHHcCCEEEEEehhhhccC---CCChhhc
Confidence 1 2 35556655 4454 6899876 89999999999999999985422222 2233444
Q ss_pred hcCccEEEEecccc-----CCCceeeEEecCHHHHHHHHH-HHH----hhC-------------------CCcch-hHHH
Q 018240 195 VQAADSASVCLSKG-----LGAPVGSVIVGSKEFIKKARR-LRK----TLG-------------------GGMRQ-VGVL 244 (359)
Q Consensus 195 ~~~~d~~~~s~~K~-----~g~~~gg~~~~~~~~~~~~~~-~~~----~~~-------------------~~~~~-~~~~ 244 (359)
++|+++.+.+|| ||+|..|++..++++.+.+.. +.. ..+ .+... ....
T Consensus 257 --GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qa 334 (954)
T PRK05367 257 --GADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQV 334 (954)
T ss_pred --CCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHH
Confidence 899999999999 677766999999887766421 000 000 00000 0111
Q ss_pred HHHHHHH-----H-HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCcee
Q 018240 245 CAAALVA-----L-QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLV 318 (359)
Q Consensus 245 ~~~~~~~-----l-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~ 318 (359)
..+...+ + +.++++..++...++.++++.|++. |+++..+ .....+.+.++. +..++.++|.++||.+
T Consensus 335 L~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~-G~~~~~~-~~f~~~~~~~~~----~~~~i~~~l~~~gi~~ 408 (954)
T PRK05367 335 LLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL-GLEVVHD-SFFDTLTVEVGG----DAAAVLARALAAGINL 408 (954)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc-CcccCCC-CCCCeEEEeCCC----CHHHHHHHHHHCCcee
Confidence 1111111 1 3455556777888999999999885 8887433 233345555432 6789999999999999
Q ss_pred ccCCCcEEEEEeCCCCCHHHHHHHHHHHH
Q 018240 319 MPESSTRVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 319 ~~~~~~~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
.....+.+|++++...+++|++.+++.|.
T Consensus 409 ~~~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 409 RRVDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred ccccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 65556789999999999999999999997
No 365
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.79 E-value=4.1e-17 Score=137.30 Aligned_cols=296 Identities=16% Similarity=0.177 Sum_probs=198.2
Q ss_pred hHHHHHHHHHHHHhCCCCeE-EcCCchHHHHHHHHHh---hhhc----CCeEEecCCCcceeeccccccccCCccceeee
Q 018240 38 PTAFRLETEMAKVMGKEAGL-FVPSGTMGNLISVLVH---CETR----GSEVILGDNSHIHIYENGGISTIGGVHPRTVK 109 (359)
Q Consensus 38 ~~~~~l~~~la~~~~~~~~~-~~~~gt~a~~~~l~~~---~~~~----g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~ 109 (359)
+...+|++.+++..|.+.+. .-.+|+++=...++.+ ...+ .+.|++|+.+|...- +.+.+.|.+++.|+
T Consensus 109 ~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNP---ASAam~G~~VV~V~ 185 (496)
T COG1003 109 ELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNP---ASAAMAGFKVVVVK 185 (496)
T ss_pred HHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCCh---hhHhhcCceEEEEe
Confidence 34578888888888998874 4556766544444443 3223 346999999998866 34889999999999
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc
Q 018240 110 NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV 189 (359)
Q Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 189 (359)
.+++|.+|+++|++++. .+++++++.+ +| -.|.. .+++.+|+++.+++|..+..|+|- +.+.. |.
T Consensus 186 ~~~~G~VDlddLk~k~~--------~~~AalMiTn-Ps-T~GvF--E~~I~ei~~ivH~~Gg~vY~DGAN-lNA~v--G~ 250 (496)
T COG1003 186 CDENGNVDLDDLRAKAE--------DNLAALMITN-PS-TLGVF--EEDIREICEIVHEAGGQVYYDGAN-LNAIV--GL 250 (496)
T ss_pred cCCCCCccHHHHHHHhc--------cceeEEEecc-Cc-ccccc--hhhHHHHHHHHHHcCCEEEecCcc-hhhhh--cc
Confidence 99999999999999999 7899999944 44 25676 578999999999999999999984 32322 32
Q ss_pred h-hHhhhcCccEEEEeccccCCCce------eeEEecCHHHHHHHHHH------HH-h--hCCC--------cchhHHHH
Q 018240 190 P-VRRLVQAADSASVCLSKGLGAPV------GSVIVGSKEFIKKARRL------RK-T--LGGG--------MRQVGVLC 245 (359)
Q Consensus 190 ~-~~~~~~~~d~~~~s~~K~~g~~~------gg~~~~~~~~~~~~~~~------~~-~--~~~~--------~~~~~~~~ 245 (359)
. ..+ .++|++-+.+||+|+.|- .|-+..++++...+..- .. . .... +..+..+.
T Consensus 251 ~rPGd--~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il 328 (496)
T COG1003 251 ARPGD--MGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASIL 328 (496)
T ss_pred ccccc--cccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHH
Confidence 2 223 389999999999996542 15566666655543320 00 0 0000 00111111
Q ss_pred HHHHHHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCcc-ceE-EEEEec---cchHHHHHHHHHHHHhcCc
Q 018240 246 AAALVAL----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVE-TNI-VYFEIT---EDSKLYAACLLKKLEEHGV 316 (359)
Q Consensus 246 ~~~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~-~~~-~~~~~~---~~~~~~~~~~~~~l~~~gi 316 (359)
..++.-+ .+++++.-+...-+++|+.+.|+.. +++...+.. ... +.+... ...+++..+++++|.++|+
T Consensus 329 ~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~Gf 406 (496)
T COG1003 329 PIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGF 406 (496)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhcCC
Confidence 2222222 3444445555667899999999873 444222211 222 222222 2245789999999999999
Q ss_pred ee----ccC-CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 317 LV----MPE-SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 317 ~~----~~~-~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
.. +|. -.+.+-|=++...+++++|++++++.++.++..+
T Consensus 407 HaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 407 HAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred CCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 76 231 3566888888888999999999999999888764
No 366
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.78 E-value=5.4e-16 Score=141.76 Aligned_cols=261 Identities=18% Similarity=0.188 Sum_probs=163.1
Q ss_pred CCccCCChHHHHHHHH----HHHHhCCCC--eEEcCCchHHHHHHHHHhhhhc--------C------------------
Q 018240 31 DDVLMHDPTAFRLETE----MAKVMGKEA--GLFVPSGTMGNLISVLVHCETR--------G------------------ 78 (359)
Q Consensus 31 ~~~~~~~~~~~~l~~~----la~~~~~~~--~~~~~~gt~a~~~~l~~~~~~~--------g------------------ 78 (359)
...+..+|....+|++ +++++|.+. +.++++||+|++.++..++... .
T Consensus 112 ~~~~e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~ 191 (608)
T TIGR03811 112 NVAYESSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPT 191 (608)
T ss_pred CCccccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhccccc
Confidence 3345556666666555 667778764 5899999999999998876421 0
Q ss_pred -------------------------------CeEEecCCCcceeeccccccccCCc---cceeeecCCCCCCCHHHHHHH
Q 018240 79 -------------------------------SEVILGDNSHIHIYENGGISTIGGV---HPRTVKNNQDGTMDIDLIEAA 124 (359)
Q Consensus 79 -------------------------------~~vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~l~~~ 124 (359)
.+++++...|++..+ + +...|+ .++.|+.++++++|++.|++.
T Consensus 192 ~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~K-A--a~ilGlG~~~vv~VpvD~~~rmd~~~L~~~ 268 (608)
T TIGR03811 192 KEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLK-A--ADIIGIGLDQVIPVPVDSNYRMDINELEKI 268 (608)
T ss_pred ccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHH-H--HHHcCCCcccEEEeecCCCCcCCHHHHHHH
Confidence 057888888999887 3 555555 588899999999999999999
Q ss_pred hcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCc--EEEEecccccch--hhhcC----c-------
Q 018240 125 IRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGL--KLHIDGARIFNA--AVALG----V------- 189 (359)
Q Consensus 125 l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~--~li~D~a~~~~~--~~~~~----~------- 189 (359)
|++..+. ..+.+.++.+...+.+|.+=|.+++.+|++.++++|+ ++|||+|++... ..... .
T Consensus 269 I~~~~~~---g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~ 345 (608)
T TIGR03811 269 IRKLAAE---KTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQE 345 (608)
T ss_pred HHHHHhc---CCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhc
Confidence 9742211 2233333446777788887664444444443478898 699999964322 11000 0
Q ss_pred -----------------hhH-h--hhcCccEEEEeccccCCCcee-e-EEecCHHHHHHHHHHHHhh-------------
Q 018240 190 -----------------PVR-R--LVQAADSASVCLSKGLGAPVG-S-VIVGSKEFIKKARRLRKTL------------- 234 (359)
Q Consensus 190 -----------------~~~-~--~~~~~d~~~~s~~K~~g~~~g-g-~~~~~~~~~~~~~~~~~~~------------- 234 (359)
... . -...+|.+++.+||++..|.+ | +++.++++.+.+.....+.
T Consensus 346 ~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~ 425 (608)
T TIGR03811 346 VHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIRMRDVISYFATYVFEKGADIPALLGA 425 (608)
T ss_pred ccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCHHHHHHHhcCcchhccccccCcccccc
Confidence 000 0 125789999999999988876 5 5555666544433211111
Q ss_pred -CCCcchhHHHHHHHHHHH------HHhHHHHhhhHHHHHHHHHHHHhcC------CCceEe-cCCccceEEEEEec
Q 018240 235 -GGGMRQVGVLCAAALVAL------QENVLVMLDGDHKKAKLLAEGLNQL------KGLRVD-VDAVETNIVYFEIT 297 (359)
Q Consensus 235 -~~~~~~~~~~~~~~~~~l------~~~~~~~~~~~~~~~~~l~~~l~~~------~g~~~~-~~~~~~~~~~~~~~ 297 (359)
+...+.++..++..+.++ .+...+.+++..+.++++.+.|++. +.+++. ..++..+++.|++.
T Consensus 426 ~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~~ 502 (608)
T TIGR03811 426 YILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPDFNMVDYVFN 502 (608)
T ss_pred cceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCCCcceEEEEEe
Confidence 111122232233333333 2345568888889999999999884 456651 23457788887765
No 367
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.78 E-value=1.8e-16 Score=151.71 Aligned_cols=299 Identities=13% Similarity=0.135 Sum_probs=194.8
Q ss_pred hHHHHHHHHHcCCCCCCccCCC-----h----HHHHHHHHHHHHhCCCC--eEEcCCchHHHHHHHHHhhhhcC--CeEE
Q 018240 16 PTEAMRAAMASAEVDDDVLMHD-----P----TAFRLETEMAKVMGKEA--GLFVPSGTMGNLISVLVHCETRG--SEVI 82 (359)
Q Consensus 16 ~~~~~~~a~~~~~~~~~~~~~~-----~----~~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l~~~~~~~g--~~vl 82 (359)
.++.+++.+.+.......|++. + ...++++.+++++|.+. ..++.++|.+...++.+....+| ++|+
T Consensus 117 ~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~Vl 196 (993)
T PLN02414 117 VPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFL 196 (993)
T ss_pred CCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCCCEEE
Confidence 3356657777644322233321 2 24677888999999974 57888888888887777654433 6799
Q ss_pred ecCCCcceeeccc-cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHH
Q 018240 83 LGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDS 161 (359)
Q Consensus 83 ~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~ 161 (359)
+++..|+...... ..++..|++++.++.+. .+ ... ..+..+++ +.++ .+|.+.| +++
T Consensus 197 Vs~~~hP~~~~v~~t~a~~~GieV~~v~~~~-----~~----~~~--------~~v~~vlv-q~P~-~~G~v~d---v~~ 254 (993)
T PLN02414 197 IASNCHPQTIDVCQTRADGLGLEVVVADEKD-----FD----YSS--------GDVCGVLV-QYPA-TDGEVLD---YAE 254 (993)
T ss_pred EcCccCHhHHHHHHHhhhhcCCEEEEecchh-----hc----ccc--------CceEEEEE-ecCC-CCeEEcC---HHH
Confidence 9999998865311 12445788888886531 11 112 23445554 5454 5799876 899
Q ss_pred HHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccC-----CCceeeEEecCHHHHHHHHH-HHHh--
Q 018240 162 VGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGL-----GAPVGSVIVGSKEFIKKARR-LRKT-- 233 (359)
Q Consensus 162 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~-----g~~~gg~~~~~~~~~~~~~~-~~~~-- 233 (359)
|.++|+++|+++++ .++..+.... .+..++ ++|+++.+.+||. |+|..|+++.++++.+.+.. +...
T Consensus 255 I~~~ah~~GaL~iV-aad~lal~~l--~~pge~--GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriVG~s~ 329 (993)
T PLN02414 255 FVKNAHANGVKVVM-ATDLLALTML--KPPGEW--GADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSV 329 (993)
T ss_pred HHHHHHHcCCEEEE-EECHHHhcCC--CCHhhc--cCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCcccCccc
Confidence 99999999999999 6654433321 124444 8999999999997 44444899998887554321 0000
Q ss_pred --h-------------------CCCcchh-HHHHHHHHHHH------HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecC
Q 018240 234 --L-------------------GGGMRQV-GVLCAAALVAL------QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVD 285 (359)
Q Consensus 234 --~-------------------~~~~~~~-~~~~~~~~~~l------~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~ 285 (359)
. ..+.... .+...+++.+. +.+.++..++..+++.++++.|++. |+++..+
T Consensus 330 d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~-G~~~~~~ 408 (993)
T PLN02414 330 DSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL-GFQVQSL 408 (993)
T ss_pred CCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc-CCccCCC
Confidence 0 0001000 01111111111 2445556677888999999999886 8887443
Q ss_pred CccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018240 286 AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
.....+.+.++ +..++.++|.++||.+.......+|+|++..++++|++.++++|..
T Consensus 409 -~~f~~vt~~~~-----~~~~v~~~L~~~gI~l~~~~~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 409 -PFFDTVKVKCS-----DADAIADAAAKVGINLRVVDANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred -CCcCeEEEecC-----CHHHHHHHHHHCCCeeEEecCCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 33445556654 3478999999999988666567899999999999999999999963
No 368
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.77 E-value=9.5e-16 Score=131.87 Aligned_cols=316 Identities=14% Similarity=0.118 Sum_probs=196.0
Q ss_pred cccccccCCCCCChHHHHHHHHHcCCCC-----CCcc-------CCChHHHHHHHHHHHHhCCCC---e-EEcCCchHHH
Q 018240 3 TRTVDLRSDTVTKPTEAMRAAMASAEVD-----DDVL-------MHDPTAFRLETEMAKVMGKEA---G-LFVPSGTMGN 66 (359)
Q Consensus 3 ~~~id~~~~~~~~~~~~~~~a~~~~~~~-----~~~~-------~~~~~~~~l~~~la~~~~~~~---~-~~~~~gt~a~ 66 (359)
.++++|..+....| ++|++.+.+...+ .... .......++++.++++++.+. . ++..|||.++
T Consensus 3 ~~~~nF~aGPa~lp-~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ 81 (364)
T PRK12462 3 RNQLNFSGGPGALP-DTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQF 81 (364)
T ss_pred cccceecCCCcCCC-HHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHH
Confidence 35677777766665 4455554432211 1111 113445788888999999853 3 4445688888
Q ss_pred HHHHHHhhhhcCCeEE--ecCCCcceeeccccccccCCccceeeec--C--CCCCCCHHHHHHHhcCCCCCccCCceeEE
Q 018240 67 LISVLVHCETRGSEVI--LGDNSHIHIYENGGISTIGGVHPRTVKN--N--QDGTMDIDLIEAAIRDPKGEIVYPTTRLI 140 (359)
Q Consensus 67 ~~~l~~~~~~~g~~vl--~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v 140 (359)
.++...++. +|++++ +....|...+. ..++..| ++..+.. . ....++++++ .++ ++.+.|
T Consensus 82 ea~~~Nll~-~g~~~~~~~~tG~fg~r~~--~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~--------~d~~~v 147 (364)
T PRK12462 82 SMIPMNFSR-PGAAAPEYVTTGYWSRKAI--GEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWD--------ARAPFR 147 (364)
T ss_pred HHHHHHcCC-CCCcEEEEEeCCHHHHHHH--HHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccC--------CCCcEE
Confidence 888888884 888554 55544333332 4455566 4444421 1 1123455554 122 456677
Q ss_pred EEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEec
Q 018240 141 CLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVG 219 (359)
Q Consensus 141 ~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~ 219 (359)
++ +.+++.||+.++ ++.+.++.++|+|.+..++... ..+. ..|+++.|..|++| |.| ++++.
T Consensus 148 ~~-t~NETstGv~~~--------~~~~~~~~llvvD~sS~~~s~p---id~~----~~dvi~agsQKnlg-P~Gltvviv 210 (364)
T PRK12462 148 HY-VSNETVEGLQFP--------DAAGLPDSPLIADMSSDFMSRP---FDVE----AYGMVYAHAQKNLG-PAGVTVAII 210 (364)
T ss_pred EE-ccCCCCceEecC--------cccccCCCeEEEEcCchhhCCC---CChH----HccEEEeeccccCC-CCceEEEEE
Confidence 77 567778999876 1222368999999986554332 2222 33999999999999 777 88888
Q ss_pred CHHHHHHHHHHHH-----------hhCCCcc-hhHHHHHH-HHHHH-HH--hHHHHhhhHHHHHHHHHHHHhcCCCceEe
Q 018240 220 SKEFIKKARRLRK-----------TLGGGMR-QVGVLCAA-ALVAL-QE--NVLVMLDGDHKKAKLLAEGLNQLKGLRVD 283 (359)
Q Consensus 220 ~~~~~~~~~~~~~-----------~~~~~~~-~~~~~~~~-~~~~l-~~--~~~~~~~~~~~~~~~l~~~l~~~~g~~~~ 283 (359)
+++.+++...... ....+++ ...+.... .+..+ ++ +++.+.++..++++.+++.+.+.+++-..
T Consensus 211 s~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~ 290 (364)
T PRK12462 211 RRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDC 290 (364)
T ss_pred CHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccC
Confidence 8888776432111 1112221 11111111 12233 34 67767788899999999999998656431
Q ss_pred --cCCccce-EEEEEeccchHHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 284 --VDAVETN-IVYFEITEDSKLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 284 --~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.+...+. .+.|++.++ ....+|.+.++++|+....|. -+++|+++...++.++++.+++.++++-++
T Consensus 291 ~~~~~~RS~mnv~f~~~~~--~l~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 291 HAHRAARSTMNVAFRFRQP--RLDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred CCChhhcCcceEEEEcCCH--HHHHHHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 1222222 355666652 467789999999999885553 356999999999999999999998876554
No 369
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.75 E-value=3.9e-15 Score=123.57 Aligned_cols=274 Identities=20% Similarity=0.231 Sum_probs=166.7
Q ss_pred HHHHHHHHcCCCC------CCccCC-ChHHHHHHHHHHHHhCCCCeEE---cCCchHHHHHHHHHhhhhcCCeEEecCCC
Q 018240 18 EAMRAAMASAEVD------DDVLMH-DPTAFRLETEMAKVMGKEAGLF---VPSGTMGNLISVLVHCETRGSEVILGDNS 87 (359)
Q Consensus 18 ~~~~~a~~~~~~~------~~~~~~-~~~~~~l~~~la~~~~~~~~~~---~~~gt~a~~~~l~~~~~~~g~~vl~~~~~ 87 (359)
..+++|+.+.-.. ...|++ +.+.+.+++..|+.|+.+.+++ +.|||+|+..+|..++ +|||+++.....
T Consensus 27 ~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~L-rpGD~ll~~tG~ 105 (403)
T PF06838_consen 27 LKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVL-RPGDELLSITGK 105 (403)
T ss_dssp HHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH---TT-EEEESSSS
T ss_pred HHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcC-CCCCeEEEcCCC
Confidence 6788888764432 234665 4577999999999999998744 6799999999999999 599998866655
Q ss_pred cceeec--------cccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhH
Q 018240 88 HIHIYE--------NGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYT 159 (359)
Q Consensus 88 ~~~~~~--------~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l 159 (359)
-|.+.. .....+-.|+....++..+++.+|.+.+++.++ +++++|++--+.....-..++.+++
T Consensus 106 PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~--------~~tk~v~IQRSrGYs~R~sl~i~~I 177 (403)
T PF06838_consen 106 PYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALK--------PNTKMVLIQRSRGYSWRPSLTIEEI 177 (403)
T ss_dssp --CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHH--------TTEEEEEEE-S-TTSSS----HHHH
T ss_pred chhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhc--------cCceEEEEecCCCCCCCCCCCHHHH
Confidence 444432 002244567888888999999999999999999 8999999977766555567888999
Q ss_pred HHHHHHHHHc--CcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCC---ceeeEEecCHHHHHHHHHHHHh-
Q 018240 160 DSVGEIAKKH--GLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGA---PVGSVIVGSKEFIKKARRLRKT- 233 (359)
Q Consensus 160 ~~i~~~~~~~--~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~---~~gg~~~~~~~~~~~~~~~~~~- 233 (359)
++++++.|+. +++++||.+ ||.+... ..+...++|++..|+-|..|+ |.||++++++++++++...-..
T Consensus 178 ~~~i~~vk~~~p~~iifVDNC--YGEFvE~---~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaP 252 (403)
T PF06838_consen 178 KEIIKFVKEINPDVIIFVDNC--YGEFVET---QEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAP 252 (403)
T ss_dssp HHHHHHHHHH-TTSEEEEE-T--TTTTTSS---S-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-T
T ss_pred HHHHHHHHhhCCCeEEEEeCC--cceeccc---cCccccchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCC
Confidence 9999999876 789999999 5555422 233334999999999999976 5679999999999986532222
Q ss_pred -----hCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCC--cc-ceEEEEEeccchHHHHH
Q 018240 234 -----LGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDA--VE-TNIVYFEITEDSKLYAA 305 (359)
Q Consensus 234 -----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~--~~-~~~~~~~~~~~~~~~~~ 305 (359)
.|.+.... -....++-- -.+......+-+......++++ |+++.+.. .. .-+..+.+..+ ....
T Consensus 253 GiG~e~G~t~~~~----R~~~QGlFl-AP~vV~eAlKgaif~A~~fe~l-G~~v~P~~~~~R~DiIQai~l~~~--e~l~ 324 (403)
T PF06838_consen 253 GIGKEVGATLGTN----RLMFQGLFL-APHVVGEALKGAIFAAALFEKL-GFEVSPKPDDPRSDIIQAIELGSP--EKLI 324 (403)
T ss_dssp TTGGGSS--TTTH----HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHT-T-EEES-TTS--SSS-EEEE-SSH--HHHH
T ss_pred ccccccccCcchH----HHHHhHHhh-chHHHHHHHHHHHHHHHHHHHc-CCcCCCCCCCCCCceEEEEECCCH--HHHH
Confidence 22222111 111111100 0123334445555666677778 99985432 12 23456777653 3566
Q ss_pred HHHHHHHh
Q 018240 306 CLLKKLEE 313 (359)
Q Consensus 306 ~~~~~l~~ 313 (359)
.|++...+
T Consensus 325 ~FC~~iQ~ 332 (403)
T PF06838_consen 325 AFCQGIQA 332 (403)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77777755
No 370
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.74 E-value=1e-15 Score=124.29 Aligned_cols=287 Identities=19% Similarity=0.192 Sum_probs=190.6
Q ss_pred HHHHHHHHHHhCCCC-eEEcCCchHHHHHHHH-Hhh-hhcCCeEEecCCCcceeeccc--cccccCCccceeeecCCCCC
Q 018240 41 FRLETEMAKVMGKEA-GLFVPSGTMGNLISVL-VHC-ETRGSEVILGDNSHIHIYENG--GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 41 ~~l~~~la~~~~~~~-~~~~~~gt~a~~~~l~-~~~-~~~g~~vl~~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~ 115 (359)
..+-..++.++|... .+.+++++..++.-+. +.+ .++|+.||+++..-+++-... ..+.+.+ +..+-.+.
T Consensus 79 ~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~-----~~~~~~~~ 153 (407)
T COG3844 79 ERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLG-----IGYDLEGV 153 (407)
T ss_pred hHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhc-----ccccceee
Confidence 556667788888865 3777777776665444 433 245788998887655543200 1122222 12223344
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
+.++++++.++ .++.+|++.+.. .-||+.++ +.+|.++++++|++++.|=+|+.|..+. .+. .
T Consensus 154 ~~P~~~~~~~~--------dd~AvV~L~~V~-y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGavp~---~Lh--~ 216 (407)
T COG3844 154 IAPRALEEAIT--------DDVAVVLLSHVN-YKTGQLLD---MRAITALAHQHGALVGWDLAHSAGAVPV---DLH--A 216 (407)
T ss_pred eChHHHHHhhc--------cceEEEEecccc-ccccceee---HHHHHHHHHhcCceEEeehhcccCCcce---eec--c
Confidence 57889999999 789999995554 48999988 8999999999999999999998877641 122 2
Q ss_pred cCccEEEEeccccC-CCcee-eEEecCHHHHHHHH-HHHHhhCC-------------------CcchhHHHHH-HHHHHH
Q 018240 196 QAADSASVCLSKGL-GAPVG-SVIVGSKEFIKKAR-RLRKTLGG-------------------GMRQVGVLCA-AALVAL 252 (359)
Q Consensus 196 ~~~d~~~~s~~K~~-g~~~g-g~~~~~~~~~~~~~-~~~~~~~~-------------------~~~~~~~~~~-~~~~~l 252 (359)
.++|+-+.+.+|++ |+|++ ++++..++..+... .+...+|. .....+++.. +...+|
T Consensus 217 ~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aL 296 (407)
T COG3844 217 AGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGAL 296 (407)
T ss_pred cCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhh
Confidence 48999999999999 44555 56665444333311 11111110 0111223333 334444
Q ss_pred HHh----HHHHhhhHHHHHHHHHHHHhcC-C--CceEecC---CccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC
Q 018240 253 QEN----VLVMLDGDHKKAKLLAEGLNQL-K--GLRVDVD---AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES 322 (359)
Q Consensus 253 ~~~----~~~~~~~~~~~~~~l~~~l~~~-~--g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~ 322 (359)
+-+ +.+.+++.....+++.+.++.. + ++++..| ...+..+.+..+ .+.++.+.|.++||+.--..
T Consensus 297 Difa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp-----~~~~V~qaLi~rGVigD~R~ 371 (407)
T COG3844 297 DIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP-----HGYQVMQALIDRGVIGDFRE 371 (407)
T ss_pred hhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC-----cHHHHHHHHHHcCccccccC
Confidence 322 2346677778888888888874 2 5666544 245667777765 57799999999999987777
Q ss_pred CcEEEEEeC-CCCCHHHHHHHHHHHHHHHHHHH
Q 018240 323 STRVRIVVH-HQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 323 ~~~lRi~~~-~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
++.+|+.++ .+++.+|+-..++.|.+++++..
T Consensus 372 P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a 404 (407)
T COG3844 372 PDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLA 404 (407)
T ss_pred CCeeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence 889999864 46788999999999999998764
No 371
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.73 E-value=1.9e-16 Score=137.64 Aligned_cols=259 Identities=20% Similarity=0.210 Sum_probs=159.2
Q ss_pred ccccccCC----CCCChHHHHHHHHHcCCCCCCc----cCCChHHHHHHHHHHHHh--CCCCeEEcCCchHHHHHHHHHh
Q 018240 4 RTVDLRSD----TVTKPTEAMRAAMASAEVDDDV----LMHDPTAFRLETEMAKVM--GKEAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~----~~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~l~~~la~~~--~~~~~~~~~~gt~a~~~~l~~~ 73 (359)
+++||.+. +....+|.+.+++.+....... ...++...++.+.+.+.+ +.+...+++||++|+..+++.+
T Consensus 17 ~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Alkla 96 (339)
T PF00202_consen 17 EYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAALKLA 96 (339)
T ss_dssp EEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHH
T ss_pred EEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccceeeeccCchHHHHHHHHHh
Confidence 56888765 4445558888888774432221 223567789999999999 4455689999999999999998
Q ss_pred h------hhcC-CeEEecCCCcceeeccccccccCC------------ccceeeecCCCCCCCHHH----------HHHH
Q 018240 74 C------ETRG-SEVILGDNSHIHIYENGGISTIGG------------VHPRTVKNNQDGTMDIDL----------IEAA 124 (359)
Q Consensus 74 ~------~~~g-~~vl~~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~----------l~~~ 124 (359)
. ..++ .+|+..+.+|..... ++ ....+ ..+..+|.+ +... +++.
T Consensus 97 ~~~~~~~~~~~r~~il~~~~~yHG~t~-~~-~s~~~~~~~~~~~~~~~~~~~~~p~~-----~~~~~~~~~~~~~~~~~~ 169 (339)
T PF00202_consen 97 RQYHNKRAYTGRRKILAFEGSYHGRTL-GA-LSLTGNPPYRKGFGPLYPGVVFVPFP-----DPAADEEEQACLNALEEL 169 (339)
T ss_dssp HHHHHHTHHHTTTEEEEETTTB-TSSH-HH-HHHSSSTHHHTTTCSSSTTEEEEETT-----CHHHHHHHHHHHHHHHHH
T ss_pred hcccccccccCCceEEEeeeeeeccCc-cc-ccccCCccccccccccccccccccCC-----ccchhhhHHHHHHHHHHH
Confidence 8 4333 456655554433221 01 11111 112333433 3333 3322
Q ss_pred hcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEe
Q 018240 125 IRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVC 204 (359)
Q Consensus 125 l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s 204 (359)
+.+ ...+++.+|++++...+.+-..++.+++++|+++|++||+++|+||++..............+...+|+++++
T Consensus 170 ~~~----~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~g 245 (339)
T PF00202_consen 170 IAA----LNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVTFG 245 (339)
T ss_dssp HHH----HHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEEE
T ss_pred HHh----hcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCcccccc
Confidence 221 1116889999999888543356677999999999999999999999975432321112223333467887776
Q ss_pred ccccCCCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHH-HhhhHHHHHHHHHHHHhcC
Q 018240 205 LSKGLGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLV-MLDGDHKKAKLLAEGLNQL 277 (359)
Q Consensus 205 ~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~l~~~l~~~ 277 (359)
|.+++... +.++.++++.+.+... ..++++...++.++++...++...++ ..++..++.+++.+.|+++
T Consensus 246 --K~l~gG~p~sav~~~~~i~~~~~~~--~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l 316 (339)
T PF00202_consen 246 --KGLGGGLPISAVLGSEEIMEAFQPG--SHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLREL 316 (339)
T ss_dssp --GGGGTTSSEEEEEEEHHHHTTSCTT--SSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred --cchhhhhhcccccccchhhcccccc--ccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 77744322 5577788887765322 25666666778888888888655542 4556666777777777654
No 372
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.73 E-value=2e-15 Score=124.28 Aligned_cols=315 Identities=19% Similarity=0.163 Sum_probs=201.9
Q ss_pred HHHHHHHHcCCCC--------CCccCCChHHHHHHHH----HHHHhCCCCe-----EEcCCchHHHHHHHHHhhhhcCCe
Q 018240 18 EAMRAAMASAEVD--------DDVLMHDPTAFRLETE----MAKVMGKEAG-----LFVPSGTMGNLISVLVHCETRGSE 80 (359)
Q Consensus 18 ~~~~~a~~~~~~~--------~~~~~~~~~~~~l~~~----la~~~~~~~~-----~~~~~gt~a~~~~l~~~~~~~g~~ 80 (359)
.++.+++.....+ ..+|+..+.++++|.. ..+.|+.+.. +..-||+-|++.+..+++ +|+++
T Consensus 54 ~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall-~Ph~R 132 (477)
T KOG2467|consen 54 RAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALL-KPHER 132 (477)
T ss_pred HHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhc-CCCCe
Confidence 5555555443322 3467777877766544 4456887742 677899999999999999 59999
Q ss_pred EE---ecCCCcceeeccccccccCCc----cceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018240 81 VI---LGDNSHIHIYENGGISTIGGV----HPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 81 vl---~~~~~~~~~~~~~~~~~~~g~----~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
|+ +|+..|.+.-.....-+.... +..++..+ ..|-+|.+.|++.... -++++|+. ..... -.
T Consensus 133 iMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~-------frPk~iia-G~SaY--~R 202 (477)
T KOG2467|consen 133 IMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATL-------FRPKLIIA-GTSAY--SR 202 (477)
T ss_pred eeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHh-------cCCcEEEe-ccccc--hh
Confidence 88 455555433110000111111 11122233 5688999999998875 57788876 32321 13
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHH---------
Q 018240 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEF--------- 223 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~--------- 223 (359)
. -|..+++++|++.|+++++|-||..|... .+.-..++ ..+|+++.+.||.+-+|.||+++.++.+
T Consensus 203 ~---~DYaR~R~Iad~~gA~Lm~DMAHISgLVA-A~vipsPF-ey~DiVTTTTHKsLRGPRg~mIFyRkGvk~~~~k~g~ 277 (477)
T KOG2467|consen 203 L---IDYARFRKIADKVGAYLMADMAHISGLVA-AGVIPSPF-EYCDIVTTTTHKSLRGPRGAMIFYRKGVKSIKPKQGK 277 (477)
T ss_pred h---ccHHHHHHHHHhcCceeehhhhhHHHHHh-cccCCCcc-cccceeeccccccccCCcceeEEEeccCCcCCCCCCC
Confidence 3 35899999999999999999999776554 34433444 4899999999999988999988865421
Q ss_pred ------HHHHHHH--HHhh-CCCcchhHHHHHHHHHHH-HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEE
Q 018240 224 ------IKKARRL--RKTL-GGGMRQVGVLCAAALVAL-QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVY 293 (359)
Q Consensus 224 ------~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~ 293 (359)
.++++.. .... |+....-..++.+...+. .++.+ ..++..+|++.|.+.|.++ |+++...+.....+.
T Consensus 278 ~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~-Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvL 355 (477)
T KOG2467|consen 278 EILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKE-YQKQVLKNAKALASALISR-GYKLVTGGTDNHLVL 355 (477)
T ss_pred cceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHH-HHHHHHHHHHHHHHHHHHc-CceEecCCccceEEE
Confidence 1222110 0011 111111122222222222 34333 7778889999999999999 999987777777788
Q ss_pred EEeccchHHHHHHHHHHHHhcCcee----ccC-----CCcEEEEEe----CCCCCHHHHHHHHHHHHHHHH
Q 018240 294 FEITEDSKLYAACLLKKLEEHGVLV----MPE-----SSTRVRIVV----HHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 294 ~~~~~~~~~~~~~~~~~l~~~gi~~----~~~-----~~~~lRi~~----~~~~~~~~i~~~~~~l~~~~~ 351 (359)
+.+.. .+++...+-+-|...+|.+ +|+ .++++|+.. +-+..++|++++.+.|.++++
T Consensus 356 vDLr~-~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 356 VDLRP-KGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred Eeccc-cCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 88876 5666666655556666655 444 456799954 334568999999998888765
No 373
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.68 E-value=2.4e-15 Score=126.20 Aligned_cols=304 Identities=18% Similarity=0.260 Sum_probs=186.9
Q ss_pred HHHHHHHHHHhCCCC---eEEcCCchHHHHHHHHHhhhh--cC----------C-eEEecCCCcceeeccccccccCCcc
Q 018240 41 FRLETEMAKVMGKEA---GLFVPSGTMGNLISVLVHCET--RG----------S-EVILGDNSHIHIYENGGISTIGGVH 104 (359)
Q Consensus 41 ~~l~~~la~~~~~~~---~~~~~~gt~a~~~~l~~~~~~--~g----------~-~vl~~~~~~~~~~~~~~~~~~~g~~ 104 (359)
.++-..+.+..|.+. +++.++|+-++..++..+..+ |+ + -+..++-+|||..+.+++..+....
T Consensus 144 ~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~ 223 (510)
T KOG0629|consen 144 EEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDH 223 (510)
T ss_pred HHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCce
Confidence 444455666677764 599999999999999988542 11 1 2447888999988844444444567
Q ss_pred ceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchh
Q 018240 105 PRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAA 184 (359)
Q Consensus 105 ~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~ 184 (359)
++.|+.++.|.+++++|++.|-+..+++. +-.++-.+...+-.|. .+++..|+++|++|+.|++||.|.+.|..
T Consensus 224 c~~v~t~e~Gkm~~~dLe~kile~k~kg~---~Pf~vnaTaGTTV~GA---FDdL~~iadiC~k~~lWmHvDAAwGGglL 297 (510)
T KOG0629|consen 224 CIKVKTDERGKMIPDDLEKKILEAKAKGG---VPFFVNATAGTTVLGA---FDDLNGIADICEKHKLWMHVDAAWGGGLL 297 (510)
T ss_pred eEEecccccCccchHHHHHHHHHHHhcCC---CCeEEEecCCceeeec---cCcHHHHHHHHHhcCEEEEeecccccccc
Confidence 88889999999999999999986433221 1233322333333333 36799999999999999999999533332
Q ss_pred h-hcCchhHhhhcCccEEEEeccccCCCcee-e-EEecCHHHHHHHHHHHHhh--------------CCCcch----hHH
Q 018240 185 V-ALGVPVRRLVQAADSASVCLSKGLGAPVG-S-VIVGSKEFIKKARRLRKTL--------------GGGMRQ----VGV 243 (359)
Q Consensus 185 ~-~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g-~~~~~~~~~~~~~~~~~~~--------------~~~~~~----~~~ 243 (359)
- ...+........++.++.+.||++|.|.. + +++..+.+.++..+....+ |.-..+ ..+
T Consensus 298 mS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~ 377 (510)
T KOG0629|consen 298 MSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDV 377 (510)
T ss_pred cChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccH
Confidence 2 11222222235788999999999999877 3 3444555666655433311 000001 111
Q ss_pred H-HHHHHHHH-HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecC--CccceEEEEEeccc-----h--H------HHHHH
Q 018240 244 L-CAAALVAL-QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVD--AVETNIVYFEITED-----S--K------LYAAC 306 (359)
Q Consensus 244 ~-~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~--~~~~~~~~~~~~~~-----~--~------~~~~~ 306 (359)
. .+..+.+- ....++.+++..+++++|.+.+++.+++..... +...++.+..++.. . . .-+-.
T Consensus 378 FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPk 457 (510)
T KOG0629|consen 378 FKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPK 457 (510)
T ss_pred HHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccchhhhHHHhhCcH
Confidence 1 22222222 133455888999999999999999988765332 22344433333320 0 0 01224
Q ss_pred HHHHHHhcCcee---ccC--CCcEEEEEe-CCCCCHHHHHHHHHHHHHHH
Q 018240 307 LLKKLEEHGVLV---MPE--SSTRVRIVV-HHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 307 ~~~~l~~~gi~~---~~~--~~~~lRi~~-~~~~~~~~i~~~~~~l~~~~ 350 (359)
+...+.++|-.. .|. .++++|+.+ ++..+.+|++.+++.|.++=
T Consensus 458 IK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlg 507 (510)
T KOG0629|consen 458 IKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLG 507 (510)
T ss_pred HHHHHHhccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhc
Confidence 555666666544 232 345688754 33578999999999887653
No 374
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.67 E-value=5.6e-14 Score=119.42 Aligned_cols=323 Identities=16% Similarity=0.186 Sum_probs=204.5
Q ss_pred HHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhC----CC-----------CeEEcCCchHHHHHHHHHhhhh----
Q 018240 18 EAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMG----KE-----------AGLFVPSGTMGNLISVLVHCET---- 76 (359)
Q Consensus 18 ~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~----~~-----------~~~~~~~gt~a~~~~l~~~~~~---- 76 (359)
|.+..-|.....+ ...+..+|...+||.-+.+|++ .+ .+++..+++++.+.++.++..+
T Consensus 87 ~siladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~ 166 (511)
T KOG0628|consen 87 PSILADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEE 166 (511)
T ss_pred HHHHHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHH
Confidence 5555555554333 2334567888899877766653 22 2388899999999999988531
Q ss_pred --cCC------------eEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEE
Q 018240 77 --RGS------------EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICL 142 (359)
Q Consensus 77 --~g~------------~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i 142 (359)
.+. .+.+++.+|.+.-+ + +...+++.+.++.+.++.++.+.|++++++..+.+ -+-.+++
T Consensus 167 ~k~~~p~~~e~~~~~~lV~Y~SDqahssvek-a--~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arG---lIPf~v~ 240 (511)
T KOG0628|consen 167 IKSRPPELHESSVLARLVAYCSDQAHSSVEK-A--CLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARG---LIPFFVC 240 (511)
T ss_pred hhcCCCcccchhhhhhheEEecCcccchHHH-h--HhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCC---CccEEEE
Confidence 111 25688889888665 4 67788888888888899999999999998643332 2334554
Q ss_pred eccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh---hcCccEEEEeccccCCC-----cee
Q 018240 143 ENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL---VQAADSASVCLSKGLGA-----PVG 214 (359)
Q Consensus 143 ~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~~d~~~~s~~K~~g~-----~~g 214 (359)
.+... | .....|++.+|..+|+++|+|+++|.||+..++... ....+ ...+|.+-+..|||+.. +.+
T Consensus 241 at~GT--T-~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCp--E~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lW 315 (511)
T KOG0628|consen 241 ATLGT--T-SSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICP--EFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLW 315 (511)
T ss_pred EeecC--c-cccccccHHHhcchhhhcCEEEEeehhhccccccCH--HHHHHhhcchhhccccCChhheeEEeeeeecce
Confidence 33332 3 334567899999999999999999999865444322 12222 24678888899999843 222
Q ss_pred ---e-----EEecCHHHHHHHHHHH--------HhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCC
Q 018240 215 ---S-----VIVGSKEFIKKARRLR--------KTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLK 278 (359)
Q Consensus 215 ---g-----~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~ 278 (359)
+ +.-.++...+...... -..+-.++..-.....-..+.+...+ ..++..+.++.+.+.+.+-+
T Consensus 316 vkd~~~~~~~~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~-~iR~h~~La~~fe~lv~~d~ 394 (511)
T KOG0628|consen 316 VKDGTKLSRAFNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQN-YIREHVRLAKEFETLVRADP 394 (511)
T ss_pred eecCceeeeeeecChHhhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHH-HHHHHHHHHHHHHHHhhcCC
Confidence 1 1222343333311110 01111111111111111112223222 55566667777777777767
Q ss_pred CceEecCCccceEEEEEeccchHHHHHHHHHHH-HhcCceecc---CCCcEEEEEe-CCCCCHHHHHHHHHHHHHHHHHH
Q 018240 279 GLRVDVDAVETNIVYFEITEDSKLYAACLLKKL-EEHGVLVMP---ESSTRVRIVV-HHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 279 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~---~~~~~lRi~~-~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.|++.. +.....++|++.+. ....+.+.+++ ....|.+++ .+...||+++ ++..+++++++..+.|.+...++
T Consensus 395 ~FE~~~-~~~lgLvcFRlk~~-N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l 472 (511)
T KOG0628|consen 395 RFEIVN-KRILGLVCFRLKGD-NEINEALLNRLNSSGRIHLVPASLHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADEL 472 (511)
T ss_pred cceeec-ccccceeEEeecCC-cHHHHHHHHHHHhcCcEEEEEeeecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Confidence 888854 45777788888873 45677888888 555666655 3677899985 55677899999999998888775
Q ss_pred H
Q 018240 354 C 354 (359)
Q Consensus 354 ~ 354 (359)
.
T Consensus 473 ~ 473 (511)
T KOG0628|consen 473 F 473 (511)
T ss_pred H
Confidence 4
No 375
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.66 E-value=1.1e-13 Score=120.31 Aligned_cols=276 Identities=19% Similarity=0.188 Sum_probs=159.9
Q ss_pred HHHHHHHHHHHhCCCCe--EEcCCchHHHHHHHHHhhhhc--CCeEEecCCCcceeeccc-cccccCCccceeeecCCCC
Q 018240 40 AFRLETEMAKVMGKEAG--LFVPSGTMGNLISVLVHCETR--GSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDG 114 (359)
Q Consensus 40 ~~~l~~~la~~~~~~~~--~~~~~gt~a~~~~l~~~~~~~--g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 114 (359)
.-+++..++++.|.+.. -+..+++.+.++++++....+ +++|+++...|+...... ..+...|++++.++.++++
T Consensus 112 lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~ 191 (429)
T PF02347_consen 112 LFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDG 191 (429)
T ss_dssp HHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTC
T ss_pred HHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccC
Confidence 46788889999999853 677778777777766654433 348999999987765300 1355578888888877676
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh
Q 018240 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
..| + +++.+|++.+|. -.|.+-+ +++|.++++++|.++++ .+-.. ... .-.+..++
T Consensus 192 ~~d--------~--------~~~a~v~vq~Pn--~~G~~ed---~~~i~~~~h~~gal~~~-~ad~~-aL~-~l~~Pge~ 247 (429)
T PF02347_consen 192 TTD--------D--------DDTAAVMVQNPN--TFGVFED---IKEIADIAHAAGALVIV-GADPN-ALG-GLKSPGEY 247 (429)
T ss_dssp SB---------S--------TTEEEEEEESS---TTSB--T---HHHHHHHHHHTT-EEEE-CGGCC-GCC-TC--GGGG
T ss_pred Ccc--------c--------cCeEEEEeecCC--CCceEee---HHHHHHHHHHcCCEEEE-ecCHH-HHh-CcCChhhc
Confidence 655 3 789999995555 3688644 99999999999999988 55211 111 11223334
Q ss_pred hcCccEEEEeccccCCCce------eeEEecCHHHHHHHH----------------------------HHHHhhCCCcch
Q 018240 195 VQAADSASVCLSKGLGAPV------GSVIVGSKEFIKKAR----------------------------RLRKTLGGGMRQ 240 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~~------gg~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~ 240 (359)
++|++ ++.+|.||.|. .|++.+++++..++. +.+.+...++.+
T Consensus 248 --GADI~-vg~~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnq 324 (429)
T PF02347_consen 248 --GADIV-VGEHQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQ 324 (429)
T ss_dssp --T-SEE-EECCTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-
T ss_pred --CccEE-eeCCCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhH
Confidence 89999 65689997652 278888888666522 111122222222
Q ss_pred hH-HHHHHHHHHH--HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCce
Q 018240 241 VG-VLCAAALVAL--QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVL 317 (359)
Q Consensus 241 ~~-~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~ 317 (359)
.- ...++....+ ++++.+..++...++.++++.|++..++.+ ..+....++....+. ....++.+++...|+.
T Consensus 325 aL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~-~~~~f~e~v~~~~~~---~~~~~l~~~~~~~gl~ 400 (429)
T PF02347_consen 325 ALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPF-DNPFFFEFVVVFSKD---KEVEELLKRGIEGGLN 400 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECS-SSSSBSSEEEEESS----HHHHHHHHTT----EE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-CCCCceeeeeecCCc---HHHHHHHHHHHhcCCC
Confidence 11 1222223233 566666888899999999999999723333 222222223333222 3444577777778876
Q ss_pred eccCCCcEEEEEeCCCCCHHHHHHHHHHH
Q 018240 318 VMPESSTRVRIVVHHQISANDVHYTLSCF 346 (359)
Q Consensus 318 ~~~~~~~~lRi~~~~~~~~~~i~~~~~~l 346 (359)
......+.+-+|+....+++|+|.++++|
T Consensus 401 ~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 401 LRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp EGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred ccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 65555568999999999999999999875
No 376
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.66 E-value=1.5e-13 Score=130.33 Aligned_cols=274 Identities=17% Similarity=0.154 Sum_probs=177.5
Q ss_pred HHHHHHHHHHHhCCCC--eEEcCCchHHHHHHHHHhhh--hcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCC
Q 018240 40 AFRLETEMAKVMGKEA--GLFVPSGTMGNLISVLVHCE--TRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDG 114 (359)
Q Consensus 40 ~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l~~~~~--~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 114 (359)
.-++++.++++.|.+. +-++..+|.+.++++++... +++++|++++..|+...... ..+...|++++.+
T Consensus 111 l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~------ 184 (939)
T TIGR00461 111 LLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV------ 184 (939)
T ss_pred HHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE------
Confidence 3567788999999984 47888888877776666432 23478999999997755210 1135678777777
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh
Q 018240 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
|.++|++.+ ++.++++ ..+| -.|.+. ++++|.++++++|.+++++.-.. ....-.+..++
T Consensus 185 --~~~~l~~~~----------~~~~v~~-q~Pn-~~G~ie---d~~~i~~~~h~~gal~~~~ad~~---al~ll~~Pge~ 244 (939)
T TIGR00461 185 --DCSDIKKAV----------DVFGCLL-QYPA-TDGSIL---DYKQLIDALHSHKSLVSVAADLM---ALTLLTPPGHY 244 (939)
T ss_pred --cHHHHhhcC----------CEEEEEE-ECCC-CCeEEe---cHHHHHHHHHHcCCEEEEEechH---HhCCcCCHHHc
Confidence 444444433 3456666 3344 468875 48999999999999999964311 11112233444
Q ss_pred hcCccEEEEeccccCCC------ceeeEEecCHHHHHHHHH--HH--------------------------HhhCCCcch
Q 018240 195 VQAADSASVCLSKGLGA------PVGSVIVGSKEFIKKARR--LR--------------------------KTLGGGMRQ 240 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~------~~gg~~~~~~~~~~~~~~--~~--------------------------~~~~~~~~~ 240 (359)
++|++ ++.+|.||. |..|++.+++++...+.. .. .+...++.+
T Consensus 245 --GaDi~-vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~q 321 (939)
T TIGR00461 245 --GADIV-LGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQ 321 (939)
T ss_pred --CCcEE-eeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHH
Confidence 89998 444454544 444888888887766321 00 011111111
Q ss_pred hHHHHHHH-HHHH--HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCce
Q 018240 241 VGVLCAAA-LVAL--QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVL 317 (359)
Q Consensus 241 ~~~~~~~~-~~~l--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~ 317 (359)
.-....++ ...+ .+++++..++...++.+|.+.|++. |+++..+ .....+.++++. .+++++.+.|.++||.
T Consensus 322 aL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~-G~~~~~~-~fF~~~~v~~~~---~~~~~i~~~~~~~gi~ 396 (939)
T TIGR00461 322 VLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEND-PHELINK-TWFDTLTVKVGN---GISSELLKAAEEFNIN 396 (939)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC-CccceEEEEeCC---CCHHHHHHHHHHCCCe
Confidence 11111111 1122 4556556777888999999999996 9987543 233334455542 2577899999999999
Q ss_pred eccCCCcEEEEEeCCCCCHHHHHHHHHHHH
Q 018240 318 VMPESSTRVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 318 ~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
+.....+.++++++..++++|++.+++.+.
T Consensus 397 l~~~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 397 LRAVDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred eeecCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 876666789999999999999999999995
No 377
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.61 E-value=6.2e-14 Score=119.44 Aligned_cols=298 Identities=16% Similarity=0.110 Sum_probs=191.4
Q ss_pred HHHHHHHHHHhCCCCe---EEcCCchHHHHHHHHHhhhhc----C---CeEEecCCCcceeeccccccccCCccceeeec
Q 018240 41 FRLETEMAKVMGKEAG---LFVPSGTMGNLISVLVHCETR----G---SEVILGDNSHIHIYENGGISTIGGVHPRTVKN 110 (359)
Q Consensus 41 ~~l~~~la~~~~~~~~---~~~~~gt~a~~~~l~~~~~~~----g---~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 110 (359)
.++-..++.+|+.+.. ..+++||++++++-....... | ..++.+...|.+..+ .++..++++..++.
T Consensus 123 ~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK---~a~yf~v~l~~V~~ 199 (491)
T KOG1383|consen 123 AECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEK---AARYFEVELREVPL 199 (491)
T ss_pred HHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHH---HHhhEEEEEEeeec
Confidence 3444447778877643 678889999766666543211 1 236667767665433 36677888888877
Q ss_pred C-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHH-cCcEEEEecccccchhhhcC
Q 018240 111 N-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKK-HGLKLHIDGARIFNAAVALG 188 (359)
Q Consensus 111 ~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~-~~~~li~D~a~~~~~~~~~~ 188 (359)
+ .++.+|+..+.+.++ ++|.+++. ..++.|+|.+ |++++|.++..+ +++++++|.+.+.+..+..-
T Consensus 200 ~~~~~~~D~~k~~~~i~--------eNti~lv~-~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~ 267 (491)
T KOG1383|consen 200 DEGDYRVDPGKVVRMID--------ENTIMLVG-SLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFINPAGY 267 (491)
T ss_pred cccceEecHHHHHHHhc--------cceEEEEE-EcCCCCccch---hhHHHHHHHHHHHhCCceeecccCccccccccc
Confidence 7 678999999999999 78888887 5666799995 558999999988 99999999984332221011
Q ss_pred chhHhhh---cCccEEEEeccccCCCcee-eEEe-cCHHHHHH-HHHHHH-------hhCCCcchhHHHHHHHHHHH---
Q 018240 189 VPVRRLV---QAADSASVCLSKGLGAPVG-SVIV-GSKEFIKK-ARRLRK-------TLGGGMRQVGVLCAAALVAL--- 252 (359)
Q Consensus 189 ~~~~~~~---~~~d~~~~s~~K~~g~~~g-g~~~-~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~l--- 252 (359)
....++. .++..++.+.||+--.|.| +|++ .++++... +.-... +.+.+.+-++...+++++++
T Consensus 268 ~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~l 347 (491)
T KOG1383|consen 268 LNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSL 347 (491)
T ss_pred cCccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHh
Confidence 1111221 3445677799997666777 5554 45554322 111111 12222333444555555554
Q ss_pred -HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccC-CCcEEEEEe
Q 018240 253 -QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE-SSTRVRIVV 330 (359)
Q Consensus 253 -~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~-~~~~lRi~~ 330 (359)
.++..+..+++.+.+..|++.+++.+++.+...| ...++.+.-. ..+-.++.+.|++.|..+-.. -+..+.+++
T Consensus 348 G~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp-~vs~~~~~s~---~~~i~elsd~l~~~GW~lnalq~P~a~Hi~v 423 (491)
T KOG1383|consen 348 GEEGYRENTQNIVETARKLREGIENIKGIKIVGKP-LVSFILFGSN---DVNIFELSDLLRKKGWILNALQFPAAIHICV 423 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhccccceecCCC-cEEEEEccCC---ccchhhhhHHHHhcCcCccccCCCCceEEEE
Confidence 2333347778889999999999999899986442 3333333322 257789999999999988211 122556655
Q ss_pred CCCCCHHH-HHHHHHHHHHHHHHHHhhc
Q 018240 331 HHQISAND-VHYTLSCFQKIYAGVCEEN 357 (359)
Q Consensus 331 ~~~~~~~~-i~~~~~~l~~~~~~~~~~~ 357 (359)
...+..++ .++++..|+++++++....
T Consensus 424 t~~~~~~~~A~~~v~Di~~~~~el~~~p 451 (491)
T KOG1383|consen 424 TRVHAREDVADRFVADIRKVVEELKSLP 451 (491)
T ss_pred EeeeccHHHHHHHHHHHHHHHHHHHhCC
Confidence 43444444 6888999999998886543
No 378
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.61 E-value=2e-12 Score=109.41 Aligned_cols=282 Identities=18% Similarity=0.215 Sum_probs=187.0
Q ss_pred HHHHHHHHHHhCCCC--eEEcCCchHHHHHHHHHhhhhc--CCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018240 41 FRLETEMAKVMGKEA--GLFVPSGTMGNLISVLVHCETR--GSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 41 ~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l~~~~~~~--g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.++...++++.|.+- +-++-.+|.+.++++++....+ .++++++...|+...... ..++-.|.+++.++.+
T Consensus 123 fefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~---- 198 (450)
T COG0403 123 FEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD---- 198 (450)
T ss_pred HHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc----
Confidence 556677999999884 4778888888888877766433 578999999998775411 1133356666666655
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec-ccccchhhhcCchhHhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG-ARIFNAAVALGVPVRRL 194 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~-a~~~~~~~~~~~~~~~~ 194 (359)
|.+++++. ++ ..+.++++..|. -.|.. .+++.++.+.++++|+++++=. --+.+.. .+..++
T Consensus 199 -d~~~l~~~-~~-------~~~~gv~vQyP~--~~G~~--~~d~~~l~~~~h~~~al~~v~aDplaL~LL----~pPGe~ 261 (450)
T COG0403 199 -DLDDLESA-DD-------GDVFGVLVQYPN--TFGIV--EEDLRALIEAAHSAGALVIVAADPLALGLL----KPPGEF 261 (450)
T ss_pred -hhhhhhhc-cc-------cCeEEEEEecCC--CCCcc--chhHHHHHHHHhhcCCEEEEEechhHhhcc----CCcccc
Confidence 88888887 53 578888885544 35644 3469999999999998877653 1111111 123333
Q ss_pred hcCccEEEEeccc-----cCCCceeeEEecCHHHHHH----------------------------HHHHHHhhCCCcchh
Q 018240 195 VQAADSASVCLSK-----GLGAPVGSVIVGSKEFIKK----------------------------ARRLRKTLGGGMRQV 241 (359)
Q Consensus 195 ~~~~d~~~~s~~K-----~~g~~~gg~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~ 241 (359)
++|+++.+.+- +||+|-.|++..++++..+ +|+-+.+.+.++.+.
T Consensus 262 --GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQa 339 (450)
T COG0403 262 --GADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQA 339 (450)
T ss_pred --CCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHH
Confidence 89998876665 2344444778777776544 333333444444333
Q ss_pred HHHHHHHHHH-H--HHhHHHHhhhHHHHHHHHHHHHhcCC-CceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCce
Q 018240 242 GVLCAAALVA-L--QENVLVMLDGDHKKAKLLAEGLNQLK-GLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVL 317 (359)
Q Consensus 242 ~~~~~~~~~~-l--~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~ 317 (359)
-...+++..+ + ..++.++.++..+++.+|++.|++.. |+++... ....-+.++++. .....+.++....|+.
T Consensus 340 LlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~-~fFdt~~v~~~~---~~~~~l~~~~~~~G~~ 415 (450)
T COG0403 340 LLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD-HFFDTFTVRVPE---EVAEALLAAAIAGGIN 415 (450)
T ss_pred HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc-cceeeEEEecch---hHHHHHHHHHHhcCCc
Confidence 2222222222 2 46666688889999999999999651 5776422 222234455553 2567778888889999
Q ss_pred eccCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 318 VMPESSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 318 ~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
+.......+-+++....++++++.+++.+...
T Consensus 416 L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 416 LRRVDADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred eeeecCCceEEEeecccCHHHHHHHHHHHhhh
Confidence 87777778889999889999999999988754
No 379
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.58 E-value=1.7e-12 Score=105.02 Aligned_cols=300 Identities=18% Similarity=0.183 Sum_probs=187.1
Q ss_pred cCCChHHHHHHHHHHHH-hCCCC---------eEEcCCchHHHHHHHHHhhh-hcCCeEEecCCCcceeeccccccccCC
Q 018240 34 LMHDPTAFRLETEMAKV-MGKEA---------GLFVPSGTMGNLISVLVHCE-TRGSEVILGDNSHIHIYENGGISTIGG 102 (359)
Q Consensus 34 ~~~~~~~~~l~~~la~~-~~~~~---------~~~~~~gt~a~~~~l~~~~~-~~g~~vl~~~~~~~~~~~~~~~~~~~g 102 (359)
|-+--+.+.++...+++ +|.+. ++.+-|||.|+..+...+.. -....|.+++|++.... .+++..|
T Consensus 70 YLpi~Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~---~if~~aG 146 (410)
T KOG1412|consen 70 YLPILGLPTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHH---AIFEKAG 146 (410)
T ss_pred hccccCchhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHH---HHHHHcC
Confidence 44444556666665554 34432 27778999999887766532 14556999999966644 4577777
Q ss_pred c-cceeeec--CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEeccc
Q 018240 103 V-HPRTVKN--NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGAR 179 (359)
Q Consensus 103 ~-~~~~v~~--~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~ 179 (359)
. ++..++. .++-.+|++.+...|+.. +.-.++++..+.+||||+-.+.|.+..|.++.++.+...+.|-+|
T Consensus 147 f~tv~~Y~yWd~~~k~~d~e~~Lsdl~~A------Pe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAY 220 (410)
T KOG1412|consen 147 FTTVATYPYWDAENKCVDLEGFLSDLESA------PEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAY 220 (410)
T ss_pred CceeeeeeeecCCCceecHHHHHHHHhhC------CCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhh
Confidence 3 3333332 244567999999888864 344456665565889999999999999999999999999999986
Q ss_pred ccchhhhcCch---hHhhh-cCccEEEE-eccccCCCc---ee--eEEecCHHHHHHHH-HHHHhhCCCcchhHHHHHHH
Q 018240 180 IFNAAVALGVP---VRRLV-QAADSASV-CLSKGLGAP---VG--SVIVGSKEFIKKAR-RLRKTLGGGMRQVGVLCAAA 248 (359)
Q Consensus 180 ~~~~~~~~~~~---~~~~~-~~~d~~~~-s~~K~~g~~---~g--g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 248 (359)
-..+.+..... ...+. .+..+++. |++|.||.- .| .++..++..+..+. ++......+++.++...+..
T Consensus 221 QGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArI 300 (410)
T KOG1412|consen 221 QGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARI 300 (410)
T ss_pred cccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHH
Confidence 54444432222 11222 24446665 999999862 44 45555666655543 22223333444344443333
Q ss_pred HHH-H------HHh---HHHHhhhHHHHHHHHHHHHhcC--CCc-eEecCCccceEEEEEeccchHHHHHHHHHHH-Hhc
Q 018240 249 LVA-L------QEN---VLVMLDGDHKKAKLLAEGLNQL--KGL-RVDVDAVETNIVYFEITEDSKLYAACLLKKL-EEH 314 (359)
Q Consensus 249 ~~~-l------~~~---~~~~~~~~~~~~~~l~~~l~~~--~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~ 314 (359)
... | +.+ +...-.|+.+++..|++.|..+ ||- .... ..-+. |.+.. .+. .-+++| +++
T Consensus 301 V~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~-~QiGM---FSyTG---Ltp-~qV~~li~~h 372 (410)
T KOG1412|consen 301 VHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHIT-QQIGM---FSYTG---LTP-AQVDHLIENH 372 (410)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH-hhccc---eeecC---CCH-HHHHHHHHhc
Confidence 222 2 112 1224455667788888888776 331 1111 11222 23323 233 445666 889
Q ss_pred CceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 315 GVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 315 gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
.|++.+.| ||+++ +++...+++..++|.+.++.+..
T Consensus 373 ~vyLl~~G----RInis-GLN~~NveyVAkAIde~Vr~~~~ 408 (410)
T KOG1412|consen 373 KVYLLSDG----RINIS-GLNMKNVEYVAKAIDETVRAIKS 408 (410)
T ss_pred eEEEecCC----cEeee-ccccccHHHHHHHHHHHHHhhcc
Confidence 99987777 88887 78889999999999999887643
No 380
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.58 E-value=3.5e-13 Score=110.41 Aligned_cols=310 Identities=16% Similarity=0.135 Sum_probs=193.4
Q ss_pred HHHHHHHHcCCC--CCCccCCChHHHHHHHHHHHHh-CCCC---------eEEcCCchHHHHHHHHHh--hhhcCCeEEe
Q 018240 18 EAMRAAMASAEV--DDDVLMHDPTAFRLETEMAKVM-GKEA---------GLFVPSGTMGNLISVLVH--CETRGSEVIL 83 (359)
Q Consensus 18 ~~~~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~-~~~~---------~~~~~~gt~a~~~~l~~~--~~~~g~~vl~ 83 (359)
|.|++|-.+... -+..|.+-.+..++...-+++. |... .+.+-|||.|+..+...+ . -++..|.+
T Consensus 73 ~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f-~~~~~I~i 151 (427)
T KOG1411|consen 73 PSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARF-YPSRDIYI 151 (427)
T ss_pred HHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhh-ccccceee
Confidence 666666554222 2335666666777777766664 4321 144557877776554443 4 36788999
Q ss_pred cCCCcceeeccccccccCCccceeee--cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHH
Q 018240 84 GDNSHIHIYENGGISTIGGVHPRTVK--NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDS 161 (359)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~~v~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~ 161 (359)
|.|++.. +. .+....|..+..++ .+....+|.+.+.+.+.+. +.-..|++..+.+||||+-.+.+.+++
T Consensus 152 p~PTWgN-h~--~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~------p~gs~ilLhaCaHNPTGvDPt~eqw~k 222 (427)
T KOG1411|consen 152 PDPTWGN-HK--NIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEA------PEGSIILLHACAHNPTGVDPTKEQWEK 222 (427)
T ss_pred cCCcccc-cC--ccccccCcceeeeeeccccccccchHHHHHHHhcC------CCCcEEEeehhhcCCCCCCccHHHHHH
Confidence 9999766 44 45888888776663 3455678988888888765 444577787888999999999999999
Q ss_pred HHHHHHHcCcEEEEecccccchhhhcCchh---Hhhh-cCccEEEE-eccccCCCc---ee--eEEecCHHHHHHHHH-H
Q 018240 162 VGEIAKKHGLKLHIDGARIFNAAVALGVPV---RRLV-QAADSASV-CLSKGLGAP---VG--SVIVGSKEFIKKARR-L 230 (359)
Q Consensus 162 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~~~-~~~d~~~~-s~~K~~g~~---~g--g~~~~~~~~~~~~~~-~ 230 (359)
|.++.++.+.+-++|-+|...+.+...... .-+. .+.++++. |+.|.+|.- .| .+++.+.+...+... +
T Consensus 223 i~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQl 302 (427)
T KOG1411|consen 223 ISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQL 302 (427)
T ss_pred HHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHH
Confidence 999999999999999986544443222221 1221 35666666 999999862 33 456667666655432 2
Q ss_pred HHhhCCCcchhHHHHHHHHHH------H-H---HhHHHHhhhHHHHHHHHHHHHhcCCCceE----ecCCccceEEEEEe
Q 018240 231 RKTLGGGMRQVGVLCAAALVA------L-Q---ENVLVMLDGDHKKAKLLAEGLNQLKGLRV----DVDAVETNIVYFEI 296 (359)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~------l-~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~----~~~~~~~~~~~~~~ 296 (359)
+....+.++.++...+..... + + ..++...+|+..+++.|.+.|+.. |... .. ..-+.|.+--+
T Consensus 303 k~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~-gs~~~W~hI~-~QIGMF~fTgl 380 (427)
T KOG1411|consen 303 KILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKE-GSPGNWSHIT-KQIGMFCFTGL 380 (427)
T ss_pred HHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcC-CCCccHHHHH-HhhheeeecCC
Confidence 222222222222222222111 1 1 112336667778888888888875 3322 11 12233333223
Q ss_pred ccchHHHHHHHHHHH-HhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 297 TEDSKLYAACLLKKL-EEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 297 ~~~~~~~~~~~~~~l-~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
+. +-++.| .++.|+....+ ||+.+ +++...++++.++|-.+.+
T Consensus 381 ------~p-eQv~~l~ke~~iYmT~dG----RiS~a-G~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 381 ------NP-EQVDWLTKEYHIYLTKDG----RISMA-GLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred ------CH-HHHHHHHhhheeeeccCc----eEeec-cccccCCcccchhhHhHhc
Confidence 33 444556 88888886555 99988 7888899999888876544
No 381
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.54 E-value=1.1e-12 Score=111.36 Aligned_cols=218 Identities=24% Similarity=0.226 Sum_probs=144.2
Q ss_pred HHHHHHHHHcCCCCCC--cc--CCChHH---HHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecC----
Q 018240 17 TEAMRAAMASAEVDDD--VL--MHDPTA---FRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGD---- 85 (359)
Q Consensus 17 ~~~~~~a~~~~~~~~~--~~--~~~~~~---~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~---- 85 (359)
.|++.+++........ -| ..+... ..+.+.++...+.+.+.++++.+.|++.++.++.. +.+++++.
T Consensus 40 ~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~--~~EvVis~g~lV 117 (395)
T COG1921 40 SPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAE--GKEVVVSRGELV 117 (395)
T ss_pred CHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhcc--CCeEEEEccccc
Confidence 3777777766443321 11 122333 34445555556667778888888888888888873 44555433
Q ss_pred -CCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHH
Q 018240 86 -NSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGE 164 (359)
Q Consensus 86 -~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~ 164 (359)
+.|++.- .+.++.|++++.+.. .......+++.+|. +++++++-.+.+|. |..-. =..+++++
T Consensus 118 ~gg~~~v~---d~~~~aG~~l~EvG~--tn~t~~~d~~~AIn--------e~ta~llkV~s~~~--~f~~~-l~~~~l~~ 181 (395)
T COG1921 118 EGGAFRVP---DIIRLAGAKLVEVGT--TNRTHLKDYELAIN--------ENTALLLKVHSSNY--GFTGM-LSEEELVE 181 (395)
T ss_pred cCCCCChh---HHHHHcCCEEEEecc--cCcCCHHHHHHHhc--------cCCeeEEEEeeccc--ccccc-ccHHHHHH
Confidence 3445433 458889999988843 33458899999999 78888776676663 33211 12678999
Q ss_pred HHHHcCcEEEEecccccchhhhcCchhHh-hhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHHhhCCCcchhHH
Q 018240 165 IAKKHGLKLHIDGARIFNAAVALGVPVRR-LVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVGV 243 (359)
Q Consensus 165 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~-~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (359)
+|+++|+++++|.+. |........+.+ +..++|++++|..|.||+|.+|++++++++++++++..-..+ +.....
T Consensus 182 ia~~~~lpvivD~aS--g~~v~~e~~l~~~la~GaDLV~~SgdKllgGPqaGii~GkKelI~~lq~~~l~Ra--lrv~K~ 257 (395)
T COG1921 182 IAHEKGLPVIVDLAS--GALVDKEPDLREALALGADLVSFSGDKLLGGPQAGIIVGKKELIEKLQSHPLKRA--LRVDKE 257 (395)
T ss_pred HHHHcCCCEEEecCC--ccccccccchhHHHhcCCCEEEEecchhcCCCccceEechHHHHHHHHhhhhhhh--hhcCcH
Confidence 999999999999973 333222222332 345899999999999999999999999999988765443332 333555
Q ss_pred HHHHHHHHHHHhH
Q 018240 244 LCAAALVALQENV 256 (359)
Q Consensus 244 ~~~~~~~~l~~~~ 256 (359)
..++...+++.+.
T Consensus 258 tla~l~~aLe~y~ 270 (395)
T COG1921 258 TLAALEAALELYL 270 (395)
T ss_pred hHHHHHHHHHHHc
Confidence 5666666665443
No 382
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.52 E-value=4.3e-14 Score=118.92 Aligned_cols=243 Identities=24% Similarity=0.271 Sum_probs=55.3
Q ss_pred HHHHHHHHcCCCCCC--ccCC-----ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcce
Q 018240 18 EAMRAAMASAEVDDD--VLMH-----DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIH 90 (359)
Q Consensus 18 ~~~~~a~~~~~~~~~--~~~~-----~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~ 90 (359)
+++.+++.+...+.. .|.. +.....+++.++.+.|++.+++++|...|++.++.++. ++.+|++++..-..
T Consensus 20 ~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la--~~~EvIvsRGelVe 97 (367)
T PF03841_consen 20 EEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELTGAEAALVVNNNAAAVLLALNTLA--KGKEVIVSRGELVE 97 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccc
Confidence 677777776443322 1221 22346778889999999999999999999999888887 67788888764321
Q ss_pred e---eccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC-CceecChhhHHHHHHHH
Q 018240 91 I---YENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC-GGRCLSVEYTDSVGEIA 166 (359)
Q Consensus 91 ~---~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p-tG~~~~~~~l~~i~~~~ 166 (359)
. +..-.+.+..|++++.|... ....+++++++|. ++|.+++-.|+.|.- .|.. ..-.++++.+++
T Consensus 98 iGgsFRip~vm~~sGa~lvEVGtt--N~t~~~Dye~AI~--------e~Ta~ll~Vh~Sn~~i~GFt-~~~~~~el~~la 166 (367)
T PF03841_consen 98 IGGSFRIPDVMRQSGARLVEVGTT--NRTHLSDYEKAIT--------ENTAALLKVHTSNFRIQGFT-GEVSLEELAELA 166 (367)
T ss_dssp --------------------------------------------------------------------------HHHHHH
T ss_pred cccccccccccccccccccccccc--ccccccccccccc--------cccccccccccccccccccc-ccccHHHHHHHH
Confidence 1 11013466789899888532 2336788899998 788887665655521 2221 112489999999
Q ss_pred HHcCcEEEEecccccchhhh---cCc----hhH-hhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHHhhCCCc
Q 018240 167 KKHGLKLHIDGARIFNAAVA---LGV----PVR-RLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGM 238 (359)
Q Consensus 167 ~~~~~~li~D~a~~~~~~~~---~~~----~~~-~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~~~~~~~ 238 (359)
++|++++++|-.. |.... .+. +.. .+..++|++++|..|.+|+|..|+++++++++++++.. ...-.+
T Consensus 167 ~~~~lp~i~Dlgs--G~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaGiI~Gkk~lI~~lk~~--pl~Ral 242 (367)
T PF03841_consen 167 KEHGLPVIVDLGS--GLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAGIIVGKKELIEKLKKH--PLGRAL 242 (367)
T ss_dssp HHHT--EEEE-TT--HHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-EEEEEEHHHHHHHHHH--HHTTT-
T ss_pred hhcCCcEEEECCC--CCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeEEEEeCHHHHHHHhhC--CCcceE
Confidence 9999999999763 22211 111 111 22358999999999999999999999999999998743 344444
Q ss_pred chhHHHHHHHHHHHHHhHH---------------HHhhhHHHHHHHHHHHHhcC
Q 018240 239 RQVGVLCAAALVALQENVL---------------VMLDGDHKKAKLLAEGLNQL 277 (359)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~---------------~~~~~~~~~~~~l~~~l~~~ 277 (359)
+..-...++...+++.+.+ ...+...++++.|...|+..
T Consensus 243 rvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 243 RVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAA 296 (367)
T ss_dssp B--HHHHHHHHHHHHH--------------------------------------
T ss_pred eeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccc
Confidence 4455555555555543221 12233445566666666654
No 383
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.52 E-value=4.3e-12 Score=107.86 Aligned_cols=294 Identities=18% Similarity=0.192 Sum_probs=162.3
Q ss_pred HHHHHHHHHhCCCC---eEEcCCch-HHHHHHHHHhhh-hcCCeEEecCCCcceeeccccccccCCccceeeecC---CC
Q 018240 42 RLETEMAKVMGKEA---GLFVPSGT-MGNLISVLVHCE-TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN---QD 113 (359)
Q Consensus 42 ~l~~~la~~~~~~~---~~~~~~gt-~a~~~~l~~~~~-~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~ 113 (359)
.+-..+.+..|.+. +++++-.| +++...+.++.. ..++.|+.+.-.|.+.++ + ....|.+++.|+.. +.
T Consensus 60 ~l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~k-a--i~~AGl~~~vV~~~~~~d~ 136 (389)
T PF05889_consen 60 SLVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFK-A--IERAGLEPVVVENVLEGDE 136 (389)
T ss_dssp HHHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHH-H--HHHTT-EEEEE-EEEETTE
T ss_pred HHHHHHHHHcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHH-H--HHhcCCeEEEeeccCCCCe
Confidence 33334445567763 45555444 345555555542 245789999999999998 3 66678888888532 22
Q ss_pred CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHh
Q 018240 114 GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRR 193 (359)
Q Consensus 114 ~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~ 193 (359)
-..|++.+++.+++.. ....+.+++++..+ .+... |++.+|.++|++||++.++-+||+.-.......-...
T Consensus 137 l~td~~~ie~~i~~~G-----~~~iLcvltttscf-apr~~--D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a 208 (389)
T PF05889_consen 137 LITDLEAIEAKIEELG-----ADNILCVLTTTSCF-APRLP--DDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQA 208 (389)
T ss_dssp EEEHHHHHHHHHHHHC-----GGGEEEEEEESSTT-TTB------HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHH
T ss_pred eeccHHHHHHHHHHhC-----CCCeEEEEEecCcc-CCCCC--ccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHH
Confidence 3347888888887421 34455555455443 24443 4699999999999999999999644222211111111
Q ss_pred h-hcCccEEEEeccccCCCcee-eEEec-CHHHHHHHHHHHHhhCCCcchhH-HHHHHHHHHH--HHhHHHHhhhHHHHH
Q 018240 194 L-VQAADSASVCLSKGLGAPVG-SVIVG-SKEFIKKARRLRKTLGGGMRQVG-VLCAAALVAL--QENVLVMLDGDHKKA 267 (359)
Q Consensus 194 ~-~~~~d~~~~s~~K~~g~~~g-g~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l--~~~~~~~~~~~~~~~ 267 (359)
+ ....|+++-|.-|.|-.|.| +.+.+ ++..+..+. ..+.+..+..+ ......+..+ ..+.. .+....+..
T Consensus 209 ~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs---~~YpGRas~sp~ld~~itLl~LG~~g~~~-ll~~r~~~f 284 (389)
T PF05889_consen 209 WRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVS---KEYPGRASASPSLDLFITLLSLGCTGYGA-LLKERKASF 284 (389)
T ss_dssp HHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHH---HTSHSHBTSHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HhcCCcceeeeecCCCEEecCCCcEEEecCHHHHHHHH---HHhhhhhhcccchHHHHHHHHHhhhHHHH-HHHHHHHHH
Confidence 1 13689999999999999988 44554 566766643 22222222222 2222222222 22222 333444444
Q ss_pred HHHHHHHh----cCCCceEecCCccceEEEEEeccchH---HHHHHHHHHHHhcCcee----ccCC---C--------cE
Q 018240 268 KLLAEGLN----QLKGLRVDVDAVETNIVYFEITEDSK---LYAACLLKKLEEHGVLV----MPES---S--------TR 325 (359)
Q Consensus 268 ~~l~~~l~----~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~gi~~----~~~~---~--------~~ 325 (359)
.++.+.|+ +. +-.+...|...-.+.+.++.-.. .+...|...|..+||.- .+.+ . .+
T Consensus 285 ~~l~erl~~~aee~-~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Y 363 (389)
T PF05889_consen 285 PYLKERLKKWAEEV-GERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPY 363 (389)
T ss_dssp HHHHHHHHHHHHHT-TEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSE
T ss_pred HHHHHHHHHHHHHh-hhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHH
Confidence 44444444 34 43443222233334455542111 25678999998887753 2221 1 56
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018240 326 VRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 326 lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
+-++...+++++|+|.++++|+++++
T Consensus 364 lt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 364 LTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp EEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 78877789999999999999999875
No 384
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.51 E-value=5.6e-12 Score=101.58 Aligned_cols=331 Identities=16% Similarity=0.149 Sum_probs=193.9
Q ss_pred ChHHHHHHHHHcCCCC---CCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh--hcCCeEEecCCCcc
Q 018240 15 KPTEAMRAAMASAEVD---DDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE--TRGSEVILGDNSHI 89 (359)
Q Consensus 15 ~~~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~--~~g~~vl~~~~~~~ 89 (359)
..+|++.++......- ...+-.++..+-.++..+.+-+.+.++|++||++|+..+|+.+.. +..|.|.+...+|.
T Consensus 61 hchp~VV~A~~kQmat~~tN~RFlhd~lv~cA~~l~stlPeLsvc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHG 140 (452)
T KOG1403|consen 61 HCHPEVVRAGAKQMATISTNNRFLHDELVQCARTLTSTLPELSVCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHG 140 (452)
T ss_pred cCCHHHHHHHHHHHhHhcccchhhHHHHHHHHHHHhhcCCCceEEEEecCCchhhHHHHHHHHhhcccCceEEEechhcc
Confidence 3458888777653211 122323344444455455555666689999999999999998864 34455555555543
Q ss_pred eeecccccccc------CC-----ccceee-ecCCC--C-------------CCCHHHHHHHhcCCCCCccCCceeEEEE
Q 018240 90 HIYENGGISTI------GG-----VHPRTV-KNNQD--G-------------TMDIDLIEAAIRDPKGEIVYPTTRLICL 142 (359)
Q Consensus 90 ~~~~~~~~~~~------~g-----~~~~~v-~~~~~--~-------------~~~~~~l~~~l~~~~~~~~~~~~~~v~i 142 (359)
.... ..+. .| -+.+.+ |.++- | ..=.+.+++.+++..... .++++.+.
T Consensus 141 Hl~s---~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g--~gvAAfiA 215 (452)
T KOG1403|consen 141 HLQS---VMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKG--QGVAAFIA 215 (452)
T ss_pred ceee---eeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcC--CcHHHHHH
Confidence 3211 1111 11 122223 22111 1 111234555554321111 45666666
Q ss_pred eccccCCCceecCh-hhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh---hcCccEEEEeccccCCCceeeEEe
Q 018240 143 ENTHANCGGRCLSV-EYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL---VQAADSASVCLSKGLGAPVGSVIV 218 (359)
Q Consensus 143 ~~~~~~ptG~~~~~-~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~~d~~~~s~~K~~g~~~gg~~~ 218 (359)
+.-.+ -+|.+.|. .+.+++.+..+.+|.+.|.||++..+... |.....+ ..-+|+++++..-..|-|.++ ++
T Consensus 216 EslQS-CGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRv--G~hyWafq~y~fiPDIVtmgKpmGNGhPVa~-Va 291 (452)
T KOG1403|consen 216 ESLQS-CGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRV--GSHYWAFQTYNFIPDIVTMGKPMGNGHPVAA-VA 291 (452)
T ss_pred HHHHh-cCCcccCchhHHHHHHHHHhcCCCeEEeehhhhccccc--chhhhhhhhhccccchheecccCCCCCeeeE-Ee
Confidence 65555 66776554 89999999999999999999998544333 3322222 124566655543333445544 66
Q ss_pred cCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcCC-CceEecC-CccceEEEEE
Q 018240 219 GSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQLK-GLRVDVD-AVETNIVYFE 295 (359)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~~-g~~~~~~-~~~~~~~~~~ 295 (359)
..+++.+.+....-.+..++..++..++.++..++...+ +.++...+..++|...|+++. ..+...+ ...+.|+-+.
T Consensus 292 ttkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGId 371 (452)
T KOG1403|consen 292 TTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGID 371 (452)
T ss_pred ccHHHHHHhccccceehhccCCCchhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeee
Confidence 788888887643333334444567788888877765443 244445566777777776641 1122211 2345555565
Q ss_pred eccc------hHHHHHHHHHHH-HhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 296 ITED------SKLYAACLLKKL-EEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 296 ~~~~------~~~~~~~~~~~l-~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+..+ +...+..+..+| +.+||.+...| ++.+.|-+..+.++++.++++..|++++.-+.
T Consensus 372 LVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGPh~NilKiKPPmCFneena~e~v~~ld~iLT~me 439 (452)
T KOG1403|consen 372 LVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGPHRNILKIKPPMCFNEENADEFVLGLDEILTVME 439 (452)
T ss_pred eecccccCCCcHHHHHHHHHHHHHhhhEEEecCCCCCceeecCCCcccChhhHHHHHHHHHHHHHHHH
Confidence 5331 223566788888 67889986654 45688877778899999999999999987544
No 385
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.49 E-value=2.1e-12 Score=114.19 Aligned_cols=299 Identities=16% Similarity=0.175 Sum_probs=193.1
Q ss_pred ChHHHHHHHHHHHHhCCCCe-EEcCCchH---HHHHHHHHhhhhcCC----eEEecCCCcceeeccccccccCCccceee
Q 018240 37 DPTAFRLETEMAKVMGKEAG-LFVPSGTM---GNLISVLVHCETRGS----EVILGDNSHIHIYENGGISTIGGVHPRTV 108 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~-~~~~~gt~---a~~~~l~~~~~~~g~----~vl~~~~~~~~~~~~~~~~~~~g~~~~~v 108 (359)
.+...+|+..+++..|.+.. +.-+||.+ +.+.++++....+|+ ..++|-.+|...- +.+.+.|.+++.|
T Consensus 581 ~~lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNP---ASA~MagmkvvpV 657 (1001)
T KOG2040|consen 581 QQLFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNP---ASAAMAGMKVVPV 657 (1001)
T ss_pred HHHHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCCh---hhHHhcCCEEEEe
Confidence 45567888999999999875 44556654 455555555443443 4788999988765 3488999999999
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcC
Q 018240 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALG 188 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~ 188 (359)
..+.+|.+|..+|++..+++. .+.+++++ +.+++ -|+. .+.+++++++.++||.-+..|+|- +.+.. |
T Consensus 658 ~~~~~G~id~~dLk~kaekh~-----~~Laa~Mv-TYPST-~Gvf--E~~i~d~cd~iHehGGQVYlDGAN-MNAqV--G 725 (1001)
T KOG2040|consen 658 GCDANGNIDMVDLKAKAEKHK-----DNLAALMV-TYPST-HGVF--EEGIDDICDIIHEHGGQVYLDGAN-MNAQV--G 725 (1001)
T ss_pred eccCCCCccHHHHHHHHHHhh-----hhhheeEE-ecccc-cccc--cccHHHHHHHHHhcCCEEEecCCC-cccee--c
Confidence 999999999999999988643 56777877 44442 3666 457999999999999999999874 22221 2
Q ss_pred c-hhHhhhcCccEEEEeccccCCCcee------eEEecCHHHHHHHHHHHHh--------h-CCCcch----hHHHHHHH
Q 018240 189 V-PVRRLVQAADSASVCLSKGLGAPVG------SVIVGSKEFIKKARRLRKT--------L-GGGMRQ----VGVLCAAA 248 (359)
Q Consensus 189 ~-~~~~~~~~~d~~~~s~~K~~g~~~g------g~~~~~~~~~~~~~~~~~~--------~-~~~~~~----~~~~~~~~ 248 (359)
. ...++ ++|++-+.+||+|+.|-| |-+..++.+...+...... . -++.+. +..+....
T Consensus 726 lc~pGd~--GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpIS 803 (1001)
T KOG2040|consen 726 LCRPGDI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPIS 803 (1001)
T ss_pred ccCCccc--cccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhH
Confidence 2 22233 889999999999966522 4455566655543211110 0 000111 11112222
Q ss_pred HHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceE---EEEEec---cchHHHHHHHHHHHHhcCcee
Q 018240 249 LVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNI---VYFEIT---EDSKLYAACLLKKLEEHGVLV 318 (359)
Q Consensus 249 ~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~l~~~gi~~ 318 (359)
+.-++ .++.+.-+...-+++|+.+.|++. +++......+.. +.+.+. ...++++.+++++|.++|...
T Consensus 804 waYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHa 881 (1001)
T KOG2040|consen 804 WAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHA 881 (1001)
T ss_pred HHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--cceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCC
Confidence 22221 223323344556789999999885 333222222211 222222 223478899999999999976
Q ss_pred c---cCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 319 M---PESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 319 ~---~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
- -.-.+.+-|-+....+.+++|++++++-.+-+++.
T Consensus 882 PTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIreEI~ 920 (1001)
T KOG2040|consen 882 PTMSWPVAGTLMIEPTESEDKAELDRFCDALISIREEIA 920 (1001)
T ss_pred CccccccCCceEeccCccccHHHHHHHHHHHHHHHHHHH
Confidence 1 11356788888878889999999999988877765
No 386
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.44 E-value=1.7e-10 Score=109.38 Aligned_cols=273 Identities=12% Similarity=0.110 Sum_probs=171.3
Q ss_pred HHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHHhhhhc--CCeEEecCCCcceeeccc-cccccCCccceeeecCCCC
Q 018240 40 AFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLVHCETR--GSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDG 114 (359)
Q Consensus 40 ~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~~~~~~--g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 114 (359)
.-+++..++++.|.+ ++-++-.+|.+.+.++++....+ ..+|++++..|+.+.... ..+...|++++.
T Consensus 126 l~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~------- 198 (954)
T PRK12566 126 LLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV------- 198 (954)
T ss_pred HHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------
Confidence 356778899999998 44777777777776555543222 568999999987654300 113345555543
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh
Q 018240 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
+++++.++ .++.+|++..| | -.|.+. ++++|.+++++.|.+++ +.+--. ... .-.+..++
T Consensus 199 ----~~~~~~~~--------~~~~~v~vq~P-~-~~G~i~---d~~~i~~~~h~~gal~~-~~~d~l-aL~-ll~~Pge~ 258 (954)
T PRK12566 199 ----DAVDNLAA--------HAVFGALLQYP-D-THGEIR---DLRPLIDQLHGQQALAC-VAADLL-SLL-VLTPPGEL 258 (954)
T ss_pred ----cchhhcCC--------CCEEEEEEECC-C-CceEEc---cHHHHHHHHHHcCCEEE-EEeCHH-HHh-CCCChhhc
Confidence 23344444 46778888444 3 468874 58999999999999866 433111 111 11223334
Q ss_pred hcCccEEEE-----eccccCCCceeeEEecCHHHHHH----------------------------HHHHHHhhCCCcchh
Q 018240 195 VQAADSASV-----CLSKGLGAPVGSVIVGSKEFIKK----------------------------ARRLRKTLGGGMRQV 241 (359)
Q Consensus 195 ~~~~d~~~~-----s~~K~~g~~~gg~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~ 241 (359)
++|+++. +..-.||+|..|++..++++..+ +++-+.+...++.+.
T Consensus 259 --GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qa 336 (954)
T PRK12566 259 --GADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQV 336 (954)
T ss_pred --CCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHH
Confidence 8998854 22233455555888888776655 222222333333332
Q ss_pred HHHHHHHHH-HH--HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCcee
Q 018240 242 GVLCAAALV-AL--QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLV 318 (359)
Q Consensus 242 ~~~~~~~~~-~l--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~ 318 (359)
-....++.. .+ .+++.+..++...++.+|.+.|++. |+++... ....-+.+++.. ...++.+...+.||-+
T Consensus 337 L~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~-g~~~~~~-~fF~~~~v~~~~----~~~~~~~~a~~~~~n~ 410 (954)
T PRK12566 337 LLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAK-GIKRLNR-HFFDTLTLEVGG----AQAAIIESAEAARINL 410 (954)
T ss_pred HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc-CCccccC-CccceEEEEccC----CHHHHHHHHHHCCCee
Confidence 222222222 23 4556556777888999999999995 9987432 112223344421 4667888888899998
Q ss_pred ccCCCcEEEEEeCCCCCHHHHHHHHHHHH
Q 018240 319 MPESSTRVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 319 ~~~~~~~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
.-.+...+.|++....+.+|++.+++.+.
T Consensus 411 r~~~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 411 RILGRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred EEeCCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 77677789999999999999999999984
No 387
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.42 E-value=4.7e-11 Score=96.32 Aligned_cols=278 Identities=20% Similarity=0.181 Sum_probs=177.5
Q ss_pred HHHHHHHHcCCCC------CCccCC-ChHHHHHHHHHHHHhCCCCe---EEcCCchHHHHHHHHHhhhhcCCeEEecCCC
Q 018240 18 EAMRAAMASAEVD------DDVLMH-DPTAFRLETEMAKVMGKEAG---LFVPSGTMGNLISVLVHCETRGSEVILGDNS 87 (359)
Q Consensus 18 ~~~~~a~~~~~~~------~~~~~~-~~~~~~l~~~la~~~~~~~~---~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~ 87 (359)
..++++..+...+ ...|++ +-+.+.|++-.++.||.+.+ ..+-|||.|+-.+|..++ +|||+++.....
T Consensus 38 ~kVL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~L-RpgDell~i~G~ 116 (416)
T COG4100 38 KKVLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGIL-RPGDELLYITGS 116 (416)
T ss_pred HHHHHHHHhcccchhccCCCCCCCccccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhcc-CCCCeEEEecCC
Confidence 4566777653322 234665 44678899999999999976 467899999999999999 599998866555
Q ss_pred cceeec--------cccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhH
Q 018240 88 HIHIYE--------NGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYT 159 (359)
Q Consensus 88 ~~~~~~--------~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l 159 (359)
-+.+.+ .....+-.|+...-++...+|.+|.+.++..++ +++++|.+.-+....---.++.+++
T Consensus 117 PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~--------~~tkli~IQRS~GY~~RpS~~I~eI 188 (416)
T COG4100 117 PYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTADGKIDIQAVKTAIS--------DRTKLIGIQRSKGYAWRPSLSIAEI 188 (416)
T ss_pred cchhHHHHhccCCCCcccHHHhCcceeecccccCCcccHHHHHHhcC--------ccceEEEEEeccCcCCCCcccHHHH
Confidence 444432 112234457777788888899999999999999 8999999955554333335667899
Q ss_pred HHHHHHHHHc--CcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCc---eeeEEecCHHHHHHHHHHHHhh
Q 018240 160 DSVGEIAKKH--GLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAP---VGSVIVGSKEFIKKARRLRKTL 234 (359)
Q Consensus 160 ~~i~~~~~~~--~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~---~gg~~~~~~~~~~~~~~~~~~~ 234 (359)
+++.++.++- ++++.||.+ ||.+... ..+...++|++..|+-|.-|+. .||++.+++++++...-....-
T Consensus 189 ~~~i~~vk~inpn~ivFVDNC--YGEFvE~---~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~yRlTaP 263 (416)
T COG4100 189 EEMITFVKEINPNVIVFVDNC--YGEFVEE---KEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAAYRLTAP 263 (416)
T ss_pred HHHHHHHHhcCCCEEEEEecc--chhhhhc---cCccccchhhhccceeeCCCCceeeccceeechHHHHHhhceeeecC
Confidence 9999998875 799999999 4544311 2233348999999999998775 4589999999998753111111
Q ss_pred CCCcchhHHHHHHHHHHHHHhH--HHHhhhHHHHHHHHHHHHhcCCCceEecC---CccceEEEEEeccchHHHHHHHHH
Q 018240 235 GGGMRQVGVLCAAALVALQENV--LVMLDGDHKKAKLLAEGLNQLKGLRVDVD---AVETNIVYFEITEDSKLYAACLLK 309 (359)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~l~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 309 (359)
|.+.. .+........-++.+. .+...+..+-+......|.++ |+.+.+. +...-+..+.+... ...-+|++
T Consensus 264 GIG~e-~Gat~~~l~~myqGlFlAPhvv~qa~Kga~fta~~le~l-g~~~~P~~~~kRtDlIQavkf~~~--eKmIaFcq 339 (416)
T COG4100 264 GIGRE-GGATLYSLREMYQGLFLAPHVVSQAVKGAHFTARFLEKL-GFPVNPKYDAKRTDLIQAVKFGSK--EKMIAFCQ 339 (416)
T ss_pred Ccccc-ccccHHHHHHHHhhhccchHHHHHHhhhhHHHHHHHHHc-CCCCCCcccccccchhhheecCCH--HHHHHHHH
Confidence 11110 0111111111111111 123334445555666667777 8776321 11223445666652 35566776
Q ss_pred HHHh
Q 018240 310 KLEE 313 (359)
Q Consensus 310 ~l~~ 313 (359)
.+..
T Consensus 340 aiQ~ 343 (416)
T COG4100 340 AIQA 343 (416)
T ss_pred HHhh
Confidence 6643
No 388
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.33 E-value=9.9e-10 Score=91.86 Aligned_cols=318 Identities=14% Similarity=0.171 Sum_probs=178.1
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCC--C--CCccC-------CChHHHHHHHHHHHHhCCCCe---EEcC-CchHHHHH
Q 018240 4 RTVDLRSDTVTKPTEAMRAAMASAEV--D--DDVLM-------HDPTAFRLETEMAKVMGKEAG---LFVP-SGTMGNLI 68 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~--~--~~~~~-------~~~~~~~l~~~la~~~~~~~~---~~~~-~gt~a~~~ 68 (359)
+.++|+++....|.+-+.++-.+... + ..... ......+.++.++++++.+.. +++. |+|.+..+
T Consensus 5 ~~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~ 84 (365)
T COG1932 5 RVYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAM 84 (365)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHH
Confidence 47899998877775433333222111 1 11111 123457788889999999864 4444 45566667
Q ss_pred HHHHhhhhcCCeEEecCCCcceeeccccccccCCcccee--ee-cCCC--CCCCHHHHHHHhcCCCCCccCCceeEEEEe
Q 018240 69 SVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRT--VK-NNQD--GTMDIDLIEAAIRDPKGEIVYPTTRLICLE 143 (359)
Q Consensus 69 ~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~--v~-~~~~--~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~ 143 (359)
+...+....+.. .+...+ ++... ...++..+..+.. .. ...+ .-++++... +. .+..-|.+
T Consensus 85 ~p~nLl~~~~~~-yv~~g~-Ws~~a-~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~--------~~~ayv~~- 150 (365)
T COG1932 85 APMNLLGKRGTD-YVDTGA-WSEFA-IKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FS--------DNDAYVHF- 150 (365)
T ss_pred HHHhhhcccCce-eEeeee-hhHhH-HHHHHHhcccccccccceeccCccCCCChhhcc--cC--------CCccEEEE-
Confidence 777777534332 233333 22221 0123333421221 11 1111 122333332 22 23333555
Q ss_pred ccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHH
Q 018240 144 NTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKE 222 (359)
Q Consensus 144 ~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~ 222 (359)
+++++-+|+-++. ...+. .+.++|+|.+...+.. ... + ...|++++|..|.+| |.| ++++.+++
T Consensus 151 ~~NeTi~Gv~v~~--~p~~~-----~~~~~v~D~SS~ilsr---~iD---v-sk~dviyagaQKnlG-paGltvvIvr~~ 215 (365)
T COG1932 151 CWNETISGVEVPE--LPDIG-----SDGLLVADASSAILSR---PID---V-SKYDVIYAGAQKNLG-PAGLTVVIVRPD 215 (365)
T ss_pred ecCCcccceEccC--CCCCC-----CCceEEEecccHHhcC---CCC---h-hHcceEEEehhhccC-ccceEEEEEcHH
Confidence 4555567887662 22221 1278999987433221 111 1 267899999999999 577 88889999
Q ss_pred HHHHHHHH--HH--------hhCCCcchhHHHHHH----HHHHH--HHhHHHHhhhHHHHHHHHHHHHhcCCCc-eE-ec
Q 018240 223 FIKKARRL--RK--------TLGGGMRQVGVLCAA----ALVAL--QENVLVMLDGDHKKAKLLAEGLNQLKGL-RV-DV 284 (359)
Q Consensus 223 ~~~~~~~~--~~--------~~~~~~~~~~~~~~~----~~~~l--~~~~~~~~~~~~~~~~~l~~~l~~~~g~-~~-~~ 284 (359)
++++++.. .. ..++++..++..+.. ...++ +.+++...++..++++.|.+.+.+. ++ .. ..
T Consensus 216 ~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s-~fy~~~v~ 294 (365)
T COG1932 216 LLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS-DFYRNLVA 294 (365)
T ss_pred HHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC-Cccccccc
Confidence 99887543 11 112222222222111 12222 3456667778889999999999997 44 22 12
Q ss_pred CCccc-eEEEEEeccchHHHHHHHHHHHHhcCceeccC--CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018240 285 DAVET-NIVYFEITEDSKLYAACLLKKLEEHGVLVMPE--SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 285 ~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~--~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+...+ ..+.|.+.+. .-...|.++++++|+..--+ ..+++|+++...++.++++.+++.++.+.++.
T Consensus 295 ~~~RS~mnV~f~~~~~--~ld~~fv~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 295 KANRSRMNVTFTLVDA--ELDKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALTDFMDWFEETY 364 (365)
T ss_pred hhhccceeEEEEcCcH--HHHHHHHHHHHHcCCceeccccCCCceeeeeecCCCHHHHHHHHHHHHHHHHhh
Confidence 22222 2366666652 24567888888887766333 23459999999999999999999998877653
No 389
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=99.29 E-value=3.1e-10 Score=93.72 Aligned_cols=222 Identities=18% Similarity=0.186 Sum_probs=143.2
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc--hhHhh
Q 018240 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV--PVRRL 194 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~ 194 (359)
.++++++.|.++.... ..+.++++++..+..+-.-.+.++.+++.+++++||+.+|+||+|..++....-. ....+
T Consensus 254 Cl~~Ve~li~~~~~k~--~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l 331 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKK--KPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNL 331 (484)
T ss_pred HHHHHHHHHHHHhhcC--CCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCC
Confidence 4668888888754332 3677899999998655567888999999999999999999999997765542111 12233
Q ss_pred hcCccEEEEeccccCCCceeeEEecCHHHHHH--HHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHH
Q 018240 195 VQAADSASVCLSKGLGAPVGSVIVGSKEFIKK--ARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAE 272 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 272 (359)
...+|++ ++||-|- .||+. -++++.-. .+.+...+|.... .++.......++ .+..++......+.|..
T Consensus 332 ~~PpD~v--TFSKK~q--~gGff-h~~~frpn~pYrifNTWmGdP~k--~lll~~vv~~I~--~~~Ll~n~~~vG~~l~~ 402 (484)
T KOG1405|consen 332 DSPPDVV--TFSKKFQ--TGGFF-HDEEFRPNEPYRIFNTWMGDPSK--NLLLEEVVQEIK--REDLLNNVAHVGKALLK 402 (484)
T ss_pred CCCccce--ehhhhhh--cCccc-cCcccCCCchHHHhhhhcCChHH--HHHHHHHHHHHh--HHHHHHHHHHHHHHHHH
Confidence 3456666 4557664 34433 33343322 2223333332221 111111121121 12244445555566666
Q ss_pred HHhcC----CCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018240 273 GLNQL----KGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 273 ~l~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
.|.++ |+.-- .-+..+.|+.+.++.+ -..+.++..++-+|+.+...+...+|+-++....+...+-+++++++
T Consensus 403 gL~~Lq~~~p~~~~-~~RGrGTF~a~d~ps~--~~Rdk~i~~~~~nGv~~GGCg~~siRfRPsLvf~~~Ha~i~l~~~~k 479 (484)
T KOG1405|consen 403 GLLELQAKYPGKIN-NLRGRGTFIAWDCPSG--SIRDKLILIARLNGVNLGGCGDKSIRFRPSLVFRKHHADIFLDIFDK 479 (484)
T ss_pred HHHHHHHhCchhhh-cccccceEEEEeCCCh--HHHHHHHHHHHHcCceecccccceeeeccceeehhhhHHHHHHHHHH
Confidence 66553 44322 2245888888888873 46678999999999999888888999998888899999999999998
Q ss_pred HHHH
Q 018240 349 IYAG 352 (359)
Q Consensus 349 ~~~~ 352 (359)
.+..
T Consensus 480 ~l~~ 483 (484)
T KOG1405|consen 480 ILAG 483 (484)
T ss_pred Hhcc
Confidence 8764
No 390
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.29 E-value=1.2e-09 Score=88.75 Aligned_cols=296 Identities=15% Similarity=0.133 Sum_probs=185.9
Q ss_pred HHHHHHHHHHhCCCC-eEEcCCchHHHHHHHHHhhhhcCC---eEEecCCCcceeecc-ccccccCCccceee--ecC-C
Q 018240 41 FRLETEMAKVMGKEA-GLFVPSGTMGNLISVLVHCETRGS---EVILGDNSHIHIYEN-GGISTIGGVHPRTV--KNN-Q 112 (359)
Q Consensus 41 ~~l~~~la~~~~~~~-~~~~~~gt~a~~~~l~~~~~~~g~---~vl~~~~~~~~~~~~-~~~~~~~g~~~~~v--~~~-~ 112 (359)
..+-..++...|+.. .+.+.+.-.+++..+...+-+|.. +|++..-++++-+.. -..+++.|..+... ... .
T Consensus 114 e~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePR 193 (465)
T KOG3846|consen 114 EPILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPR 193 (465)
T ss_pred hhhhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEeccc
Confidence 344555777788764 466666667777777666544543 577777666554320 02266777665432 111 1
Q ss_pred C--CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch
Q 018240 113 D--GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP 190 (359)
Q Consensus 113 ~--~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~ 190 (359)
. -.+-.+++.+.|+.+. ..+++|+++..+. .||+.++ +.+|...-+..|+++=.|-||++|..+ ..
T Consensus 194 EGEetlRteDILd~IEkng-----DeiA~v~fSGvqy-YTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHAvgNVp---L~ 261 (465)
T KOG3846|consen 194 EGEETLRTEDILDTIEKNG-----DEIALVCFSGVQY-YTGQYFD---IGAITFAGQFKGCLVGFDLAHAVGNVP---LQ 261 (465)
T ss_pred ccccchhHHHHHHHHHhcC-----CeEEEEEeeccee-ecccccc---hhhhhhcccCCCcEechhhhhhhcCCc---eE
Confidence 2 2356678888887432 5788999977766 8999988 788887777779999999998775442 22
Q ss_pred hHhhhcCccEEEEeccccCCCcee---eEEecCHHHHHHHHHHHHh---------------------hCCCcchhHHHHH
Q 018240 191 VRRLVQAADSASVCLSKGLGAPVG---SVIVGSKEFIKKARRLRKT---------------------LGGGMRQVGVLCA 246 (359)
Q Consensus 191 ~~~~~~~~d~~~~s~~K~~g~~~g---g~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~ 246 (359)
.. .+++|+......|.+..+.| |..+-.+...+...++... .|...+.+++...
T Consensus 262 LH--dWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v 339 (465)
T KOG3846|consen 262 LH--DWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDV 339 (465)
T ss_pred Ee--ecCCceEEEeeecccccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHH
Confidence 22 34899999988998854333 5444444433332222222 2222333444444
Q ss_pred HH-HHHHHHhH----HHHhhhHHHHHHHHHHHHhcCC-----------CceEecC---CccceEEEEEeccchHHHHHHH
Q 018240 247 AA-LVALQENV----LVMLDGDHKKAKLLAEGLNQLK-----------GLRVDVD---AVETNIVYFEITEDSKLYAACL 307 (359)
Q Consensus 247 ~~-~~~l~~~~----~~~~~~~~~~~~~l~~~l~~~~-----------g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 307 (359)
++ ...++-+. +..+.+..-...+|...++... -+.+..| ...+..+.+.++. ....+
T Consensus 340 ~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss----p~~~v 415 (465)
T KOG3846|consen 340 VALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS----PTPKV 415 (465)
T ss_pred HHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCC----CchHH
Confidence 44 34444332 2233343444445544444332 2333332 2457778888876 34689
Q ss_pred HHHHHhcCceeccCCCcEEEEE-eCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 308 LKKLEEHGVLVMPESSTRVRIV-VHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 308 ~~~l~~~gi~~~~~~~~~lRi~-~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
.++|.++|+..-...++.+|+. .+.+++-.|+..++..|.+++.++.
T Consensus 416 fqeL~krGv~~DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 416 FQELHKRGVIGDKRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred HHHHHHcCeeccccCCCceEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence 9999999999988888999997 5668899999999999999988764
No 391
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.28 E-value=3.5e-10 Score=93.84 Aligned_cols=274 Identities=14% Similarity=0.095 Sum_probs=145.9
Q ss_pred HHHHHHHHHHHHh---CCC----CeEEcCCchHHHHHH-HHHhhhh--c---CCeEEecCCCcceeeccccccccCCccc
Q 018240 39 TAFRLETEMAKVM---GKE----AGLFVPSGTMGNLIS-VLVHCET--R---GSEVILGDNSHIHIYENGGISTIGGVHP 105 (359)
Q Consensus 39 ~~~~l~~~la~~~---~~~----~~~~~~~gt~a~~~~-l~~~~~~--~---g~~vl~~~~~~~~~~~~~~~~~~~g~~~ 105 (359)
...+|++.|.++. |.. .-+++.+|+.-++.+ +.++... + ..+|+...|.|.. |. .......-..
T Consensus 44 ~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~-Y~--~qt~~f~s~~ 120 (363)
T PF04864_consen 44 ISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSS-YP--EQTDFFDSRL 120 (363)
T ss_dssp S-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CH-HH--HHCCCT-BTT
T ss_pred ccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccc-hH--HHHHhccccC
Confidence 4477777777664 332 227777776655554 4454432 1 1258888887544 54 1233322222
Q ss_pred eee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchh
Q 018240 106 RTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAA 184 (359)
Q Consensus 106 ~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~ 184 (359)
..+ .....+. +. + .....|=+.+.+|||.|.+ .+.+. +.-+..+|-|-||-+ .
T Consensus 121 y~w~Gda~~~~-~~-------~--------~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYW--P 174 (363)
T PF04864_consen 121 YKWAGDASNFK-NS-------D--------NPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYW--P 174 (363)
T ss_dssp EEEEEECCCGT-T--------S---------CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-S--T
T ss_pred ccccccHHhhc-cC-------C--------CCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeec--c
Confidence 223 2111111 00 0 1222333447888899985 22222 445667899998633 2
Q ss_pred hhcCchhHhhhcCccEEEEeccccCCC---ceeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHH-HHH-------
Q 018240 185 VALGVPVRRLVQAADSASVCLSKGLGA---PVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALV-ALQ------- 253 (359)
Q Consensus 185 ~~~~~~~~~~~~~~d~~~~s~~K~~g~---~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~------- 253 (359)
-+.+.+ -..+.|++.+++||.=|- ..|+.++-++++.+++..+......+.+.-.++.++.+. .+-
T Consensus 175 hyTpI~---~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~ 251 (363)
T PF04864_consen 175 HYTPIT---APADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEK 251 (363)
T ss_dssp TTS------S-B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHT
T ss_pred cccccC---CCCCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCC
Confidence 222222 224778999999998754 344567778999999887777666666655555555432 221
Q ss_pred ---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecC------------CccceEEEEEeccchHHHHHHHHHHHHhcCcee
Q 018240 254 ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVD------------AVETNIVYFEITEDSKLYAACLLKKLEEHGVLV 318 (359)
Q Consensus 254 ---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~ 318 (359)
+..+--.+...++-++|++.++...-|.+..- .+...|.|+++..+ ..++..+.|++.||..
T Consensus 252 ~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~e---ed~DC~~~l~~~~I~t 328 (363)
T PF04864_consen 252 GTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCERE---EDEDCYAVLREAKIIT 328 (363)
T ss_dssp TTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSC---GGSSHHHHHHCTTEEE
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCc---ccccHHHHHHhCCccc
Confidence 12332344566777888888887544444211 12466899999863 3346667788999998
Q ss_pred ccC-----CCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 319 MPE-----SSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 319 ~~~-----~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
..| +..++|+|+ ..++++++.++++|..+
T Consensus 329 r~G~~fga~~ryVRlSm--l~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 329 RSGVLFGADSRYVRLSM--LKRDDDFDQLLERLSKL 362 (363)
T ss_dssp EEGGGGTS-TTEEEEES--SS-HHHHHHHHHHHHCC
T ss_pred CCCCccCCCCCeEEEec--cCCHHHHHHHHHHHHhh
Confidence 554 567899998 68999999999999753
No 392
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=99.06 E-value=3e-09 Score=84.64 Aligned_cols=296 Identities=16% Similarity=0.161 Sum_probs=159.4
Q ss_pred HHHHHHHHHhCCC---CeEEcCCch-HHHHHHHHHhhhhcC--CeEEecCCCcceeeccccccccCCccceeeecC---C
Q 018240 42 RLETEMAKVMGKE---AGLFVPSGT-MGNLISVLVHCETRG--SEVILGDNSHIHIYENGGISTIGGVHPRTVKNN---Q 112 (359)
Q Consensus 42 ~l~~~la~~~~~~---~~~~~~~gt-~a~~~~l~~~~~~~g--~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~ 112 (359)
++...+..+.|.. +|++++=.| +++...+..+..++. .-|+.++-...+.++ . ....|.+++.+..- +
T Consensus 61 e~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~k--s-i~~agfepiiie~i~d~d 137 (432)
T KOG3843|consen 61 EFAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFK--S-IIHAGFEPIIIENILDGD 137 (432)
T ss_pred HHHHHHHHHhhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHH--H-HHhcCCCceeeeccccch
Confidence 3333444455554 454443222 455556666654332 236677766666665 1 44567788777322 2
Q ss_pred CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceec--ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch
Q 018240 113 DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCL--SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP 190 (359)
Q Consensus 113 ~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~--~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~ 190 (359)
.-..|++.+++.+++ .+..+|++.++.. .... +.+.+++|..+|..|+++-++..+| |... ...
T Consensus 138 ~l~tdleav~~~iee-------~g~dcilci~stt---scfapr~pd~leaiaaica~~diphivnnay--glqs--ee~ 203 (432)
T KOG3843|consen 138 ELITDLEAVEAIIEE-------LGEDCILCIHSTT---SCFAPRSPDNLEAIAAICAAHDIPHIVNNAY--GLQS--EEC 203 (432)
T ss_pred HHHHhHHHHHHHHHH-------hCCceEEEEeecc---cccCCCCCchHHHHHHHHHccCchhhhcccc--ccch--HHH
Confidence 233488999999986 3444444423322 2333 3488999999999999999999985 3322 112
Q ss_pred hHhhh-----cCccEEEEeccccCCCceeeEEec--CHHHHHHHHHHHHhhCCCcchhH-HHHHHHH-----HHHHHhHH
Q 018240 191 VRRLV-----QAADSASVCLSKGLGAPVGSVIVG--SKEFIKKARRLRKTLGGGMRQVG-VLCAAAL-----VALQENVL 257 (359)
Q Consensus 191 ~~~~~-----~~~d~~~~s~~K~~g~~~gg~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~l~~~~~ 257 (359)
+..+. ...|.++.|+-|.|..|.||.++. +..+++.+. ..+.+..+.++ ......+ .++.+.+.
T Consensus 204 i~~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~ia---k~ypgrasa~ps~dllitll~~gqn~f~e~~~ 280 (432)
T KOG3843|consen 204 IHKIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIA---KMYPGRASASPSLDLLITLLSLGQNAFKELFG 280 (432)
T ss_pred HHHHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHHHH---HhCCCccccCccHHHHHHHHHhchhHHHHHHH
Confidence 22221 356778889999999999975554 566666643 33333322222 1111112 22233333
Q ss_pred HHhhhHHHHHHHHHHHHhcCCCceEe-cCCcc-ceEEEEE-eccchHHHHHHHHHHHHhcCce---eccCCC--------
Q 018240 258 VMLDGDHKKAKLLAEGLNQLKGLRVD-VDAVE-TNIVYFE-ITEDSKLYAACLLKKLEEHGVL---VMPESS-------- 323 (359)
Q Consensus 258 ~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~-~~~~~~~-~~~~~~~~~~~~~~~l~~~gi~---~~~~~~-------- 323 (359)
++.+....+++.+...-+.+ |-.+. .|... +.-+.+. ++.........|-..|...||. ++|.+.
T Consensus 281 eqkemf~~l~~ki~~~ae~~-~e~l~~~p~n~is~amtl~ti~~~k~kavt~~gsilfak~isgarvv~~~q~kttieg~ 359 (432)
T KOG3843|consen 281 EQKEMFLKLRNKIIKFAEAI-GECLLETPENEISLAMTLKTIDEAKDKAVTLFGSILFAKGISGARVVPLGQMKTTIEGC 359 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHh-hhhhhcCCCchhhhhhhhccCChHHhhHHHHHHHHHHhccccCceEeeccccceeeece
Confidence 33334444444444333333 22221 11111 1112222 2221011224555666666664 344321
Q ss_pred --------------cEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhhcC
Q 018240 324 --------------TRVRIVVHHQISANDVHYTLSCFQKIYAGVCEENG 358 (359)
Q Consensus 324 --------------~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~ 358 (359)
.++.+.++.+++..|+|.++.+|++++.++.++..
T Consensus 360 ef~~f~sht~e~~~~yln~a~aigm~~hdld~~~~rl~~~~a~~~ke~a 408 (432)
T KOG3843|consen 360 EFIGFGSHTNEQHCAYLNAACAIGMKDHDLDEFFNRLDRCLAAFRKELA 408 (432)
T ss_pred EEeccccccCcCchhHhhHHHhcCCcHhHHHHHHHHHHHHHHHHHHHHh
Confidence 12555666678999999999999999998876644
No 393
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.98 E-value=3.4e-07 Score=82.01 Aligned_cols=270 Identities=17% Similarity=0.176 Sum_probs=163.6
Q ss_pred HHHHHHHhCCCC--eEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCCCCHHH
Q 018240 44 ETEMAKVMGKEA--GLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGTMDIDL 120 (359)
Q Consensus 44 ~~~la~~~~~~~--~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~ 120 (359)
...++++.|.+. +-+.--||.|.++..+.....++.+++++..+|..+.... .-+.-.|++++.. |.++
T Consensus 169 QTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~--------~~~~ 240 (1001)
T KOG2040|consen 169 QTMITDLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS--------DIKE 240 (1001)
T ss_pred HHhhhhccCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEec--------CHHH
Confidence 345777777763 4677788888888777766667788999999998776410 0011123222111 3333
Q ss_pred HHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccE
Q 018240 121 IEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADS 200 (359)
Q Consensus 121 l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~ 200 (359)
..... .....+++ ..+. --|.+.+ ..++++.+++.|.++++-.- .... ..-++..++ ++|+
T Consensus 241 ~~~s~---------~~v~gvlv-QYP~-t~G~i~d---~~el~~~a~~~~s~vv~atD--LLaL-tiLrpPgef--GaDI 301 (1001)
T KOG2040|consen 241 ADYSS---------KDVSGVLV-QYPD-TEGSVLD---FDELVELAHANGSLVVMATD--LLAL-TILRPPGEF--GADI 301 (1001)
T ss_pred hhccc---------cceeEEEE-EcCC-CCCcccC---HHHHHHHhhccCceEEEeeh--hhHH-HccCChhhc--Ccee
Confidence 22211 34566666 4444 2467666 78899999999988766431 1111 112334444 8998
Q ss_pred EEEeccccCCCcee------eEEecCHHHHHH----------------------------HHHHHHhhCCCcchhHHHHH
Q 018240 201 ASVCLSKGLGAPVG------SVIVGSKEFIKK----------------------------ARRLRKTLGGGMRQVGVLCA 246 (359)
Q Consensus 201 ~~~s~~K~~g~~~g------g~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~ 246 (359)
.+.|... ||.|.| |++.+.+++... +++-+.+...++.+.-+...
T Consensus 302 avGSsQR-FGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANm 380 (1001)
T KOG2040|consen 302 AVGSSQR-FGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANM 380 (1001)
T ss_pred eeccccc-cCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHH
Confidence 8887776 666644 444444443322 11111122222322222222
Q ss_pred HHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCC
Q 018240 247 AALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESS 323 (359)
Q Consensus 247 ~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~ 323 (359)
++..++ .+.++++.++.......|...|+.. |-+++. ....-.+-+++.. +.+++.++..+++|-+.....
T Consensus 381 aAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~~-k~fFDTLkI~~~~----s~~~~l~rA~~~~iNlr~~ed 454 (1001)
T KOG2040|consen 381 AAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQH-KPFFDTLKIRCGC----SAEEVLDRAAKRQINLRLVED 454 (1001)
T ss_pred HHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhcc-ccccceEEEEecC----cHHHHHHHHHhhcCceEEeec
Confidence 223333 3555557777778888999999987 766642 2222224445544 688888888888888877778
Q ss_pred cEEEEEeCCCCCHHHHHHHHHHHH
Q 018240 324 TRVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 324 ~~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
+.+-+++....+++|++.++..+.
T Consensus 455 ~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 455 GTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred CceEEeecccccHHHHHHHHHHHc
Confidence 889999988899999999999886
No 394
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=98.25 E-value=0.00017 Score=58.67 Aligned_cols=318 Identities=16% Similarity=0.161 Sum_probs=168.7
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCC-C----------CccCCChHHHHHHHHHHHHhCCCCe---EEc-CCchHHHHH
Q 018240 4 RTVDLRSDTVTKPTEAMRAAMASAEVD-D----------DVLMHDPTAFRLETEMAKVMGKEAG---LFV-PSGTMGNLI 68 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~-~----------~~~~~~~~~~~l~~~la~~~~~~~~---~~~-~~gt~a~~~ 68 (359)
+.++|+.+....|++-++++-++...- . ..-.....+.+.+..+.++++.+.. ++. .+||...-+
T Consensus 7 ~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qFaA 86 (370)
T KOG2790|consen 7 RVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQFAA 86 (370)
T ss_pred ceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcccccc
Confidence 458999988888876555555543211 1 1111234567888889999999864 444 455554444
Q ss_pred HHHHhhh-hcC---CeEEecCCCcceeeccccccccCCccceeeecCC--C-C-CCCHHHHHHHhcCCCCCccCCceeEE
Q 018240 69 SVLVHCE-TRG---SEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--D-G-TMDIDLIEAAIRDPKGEIVYPTTRLI 140 (359)
Q Consensus 69 ~l~~~~~-~~g---~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~-~-~~~~~~l~~~l~~~~~~~~~~~~~~v 140 (359)
+...+.. +.| |-|+.-..+-...- -++..|..-..++.-. . + -+|.+.++. + ++.+.|
T Consensus 87 v~lNL~glK~g~~AdYiVTGsWS~KA~~----EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~--------~da~yv 152 (370)
T KOG2790|consen 87 VPLNLIGLKHGRCADYVVTGSWSAKAAE----EAKKYGTPNIVIPKLKSYTYGKVPDPSTWEL--N--------PDASYV 152 (370)
T ss_pred cchhhhccccCCccceEEeccccHHHHH----HHHhhCCceEEeccccccccCcCCChhhccc--C--------CCccEE
Confidence 4444442 233 22443332211111 1333442212221111 1 1 235444442 2 455566
Q ss_pred EEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEec
Q 018240 141 CLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVG 219 (359)
Q Consensus 141 ~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~ 219 (359)
+. ....+--|+-++. +. +-..+|.++|+|-+.-|...+ .. . ...+++..+..|..| |.| .+++.
T Consensus 153 yy-CaNETVHGVEf~~--~P----~~~~~~~vlVaDmSSnflSrp---vD---v-sk~gvi~aGAQKN~G-~aG~Tvviv 217 (370)
T KOG2790|consen 153 YY-CANETVHGVEFDF--IP----VNDPKGAVLVADMSSNFLSRP---VD---V-SKFGVIFAGAQKNVG-PAGVTVVIV 217 (370)
T ss_pred EE-ecCceeeceecCC--CC----CCCCCCceEEEecccchhcCC---cc---c-hhcceEEeccccccC-ccccEEEEE
Confidence 66 2333344665442 22 223578999999763221111 11 1 144577779999998 577 77778
Q ss_pred CHHHHHHHHHHHHh-----------hCCCcc-hhHHH-HHHHHHHH--HHhHHHHhhhHHHHHHHHHHHHhcCCCceEec
Q 018240 220 SKEFIKKARRLRKT-----------LGGGMR-QVGVL-CAAALVAL--QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDV 284 (359)
Q Consensus 220 ~~~~~~~~~~~~~~-----------~~~~~~-~~~~~-~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~ 284 (359)
+++++......... .-+++. ..++. +-.....+ +.++....+...+.++.|.+.+.+..||-...
T Consensus 218 r~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cp 297 (370)
T KOG2790|consen 218 RKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCP 297 (370)
T ss_pred ehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcc
Confidence 88877664322211 011111 11111 12223333 23344344556788899999999876775421
Q ss_pred --CCcc-ceEEEEEeccchHHHHHHHHHHHHhcCceeccC--CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 285 --DAVE-TNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE--SSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 285 --~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~--~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
+... -.-+.|++.. ++.+ ++|.++..+++..-.-| +-+++|-++.-.++.++++.+++.+++..+.
T Consensus 298 Ve~~~RS~MNV~Fri~~-d~Le-~eFLkeA~~~~mv~LKGhRSVGGiRASlYNAisv~~~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 298 VEPSVRSRMNVPFRIEK-DELE-AEFLKEAAKEHMVQLKGHRSVGGIRASLYNAISVEEVQKLAAFMKEFQKK 368 (370)
T ss_pred cchhhhhhcccceeecc-hHHH-HHHHHHHHHhhhhccccccccccchhhhhccccHHHHHHHHHHHHHHHHh
Confidence 1111 2236677765 3333 45555555555433233 3456999998899999999999998877653
No 395
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.96 E-value=0.0013 Score=49.92 Aligned_cols=55 Identities=13% Similarity=0.147 Sum_probs=39.1
Q ss_pred cCCChHHHHHHHHHHHHh----C--CC---CeE-EcCCchHHHHHHHHHhhhhcCCeEEecCCCcc
Q 018240 34 LMHDPTAFRLETEMAKVM----G--KE---AGL-FVPSGTMGNLISVLVHCETRGSEVILGDNSHI 89 (359)
Q Consensus 34 ~~~~~~~~~l~~~la~~~----~--~~---~~~-~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~ 89 (359)
|+...+..++++++++++ | .+ ..+ +++++++++..++..++ .+||.|++++|+|.
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~-dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIA-DPGDAFLVPTPYYA 152 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHc-CCCCEEEEeCCCCC
Confidence 666677888888888876 3 11 124 44555566667667777 59999999999975
No 396
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=93.41 E-value=0.65 Score=41.65 Aligned_cols=128 Identities=18% Similarity=0.303 Sum_probs=69.9
Q ss_pred EEecCCCcceeeccccccccCCccceee----ecCC---CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee
Q 018240 81 VILGDNSHIHIYENGGISTIGGVHPRTV----KNNQ---DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC 153 (359)
Q Consensus 81 vl~~~~~~~~~~~~~~~~~~~g~~~~~v----~~~~---~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~ 153 (359)
+.++...|.-....+ ++-.|+..+.+ +.+. .|++|.-.+++.+++.-.. .++.++++.-....-.|.
T Consensus 234 ~YiS~alh~~l~hYa--arefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaa---gkkPLilia~iGasi~Gq- 307 (838)
T KOG0630|consen 234 FYISEALHMDLLHYA--AREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAA---GKKPLILIADIGASICGQ- 307 (838)
T ss_pred EEEcccccHHHHHHH--HHHhCCchhheecccccccccccccccHHHHHHHHHHHHhC---CCCCeEEEEeccchhhcc-
Confidence 555555554433211 44456544444 1222 2588999999999863222 234455553333322333
Q ss_pred cChhhHHHHHHHHHHcC-cEEEEecccccchhhhcC-c-hhHhhhcCccEEEEeccccCCCceeeEE
Q 018240 154 LSVEYTDSVGEIAKKHG-LKLHIDGARIFNAAVALG-V-PVRRLVQAADSASVCLSKGLGAPVGSVI 217 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~-~~li~D~a~~~~~~~~~~-~-~~~~~~~~~d~~~~s~~K~~g~~~gg~~ 217 (359)
.+-+-+|.++|+++. .|++.-+.- ..+..+.. . ...-.....|.+.....-|+|.|..-++
T Consensus 308 --nDmi~kildi~eahakfWLHasGha-iAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV 371 (838)
T KOG0630|consen 308 --NDMILKILDICEAHAKFWLHASGHA-IAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIV 371 (838)
T ss_pred --hHHHHHHHHHHHHhhheeEeeccch-hhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceE
Confidence 467899999999997 899887642 11211111 1 1111123456666677778888766333
No 397
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=83.83 E-value=18 Score=28.75 Aligned_cols=105 Identities=17% Similarity=0.147 Sum_probs=69.1
Q ss_pred EcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCce
Q 018240 58 FVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTT 137 (359)
Q Consensus 58 ~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 137 (359)
+.++=|+.++..+..... .|.+|++..|..-..+..+.+....|.+...+..+ +..++-+.+...... ..+
T Consensus 13 M~SGKT~eLl~r~~~~~~-~g~~v~vfkp~iD~R~~~~~V~Sr~G~~~~A~~i~-----~~~~i~~~i~~~~~~---~~~ 83 (201)
T COG1435 13 MFSGKTEELLRRARRYKE-AGMKVLVFKPAIDTRYGVGKVSSRIGLSSEAVVIP-----SDTDIFDEIAALHEK---PPV 83 (201)
T ss_pred CcCcchHHHHHHHHHHHH-cCCeEEEEecccccccccceeeeccCCcccceecC-----ChHHHHHHHHhcccC---CCc
Confidence 344556777777777664 78889998888766655455566777666655444 334444445432111 226
Q ss_pred eEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018240 138 RLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 138 ~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
.+|.++- -+.++.+-+..+.+++++.|+.+++=+
T Consensus 84 ~~v~IDE------aQF~~~~~v~~l~~lad~lgi~Vi~~G 117 (201)
T COG1435 84 DCVLIDE------AQFFDEELVYVLNELADRLGIPVICYG 117 (201)
T ss_pred CEEEEeh------hHhCCHHHHHHHHHHHhhcCCEEEEec
Confidence 6777743 256778888999999999999999864
No 398
>smart00642 Aamy Alpha-amylase domain.
Probab=83.31 E-value=5.4 Score=30.89 Aligned_cols=58 Identities=21% Similarity=0.185 Sum_probs=38.7
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc-----------------eecChhhHHHHHHHHHHcCcEEEEecc
Q 018240 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG-----------------RCLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG-----------------~~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
|.+.+.+.++...+ -+...|++.++...+.+ ..-+.++++++++.|+++|+.||+|-+
T Consensus 17 ~~~gi~~~l~yl~~----lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 17 DLQGIIEKLDYLKD----LGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred CHHHHHHHHHHHHH----CCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 56666665442111 46778888666544421 112347899999999999999999986
No 399
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=80.42 E-value=11 Score=33.35 Aligned_cols=85 Identities=13% Similarity=0.157 Sum_probs=52.1
Q ss_pred CeEEecCCCcceeeccccccccCCccceeeecCCCCC-CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChh
Q 018240 79 SEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGT-MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVE 157 (359)
Q Consensus 79 ~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~ 157 (359)
+.-++..+++....+.- +... +-++..++.++.+. .+.+.|.+.+++.. .+..++++ +-++ -|...+
T Consensus 92 ~~~l~~~~~r~T~~K~R-v~s~-nQQllRvD~Ee~~~~~~~~~ll~~~~~~l-----~~~~~vVL-SDY~--KG~L~~-- 159 (467)
T COG2870 92 DSDLLRDKNRPTIVKLR-VLSR-NQQLLRLDFEEKFPIEDENKLLEKIKNAL-----KSFDALVL-SDYA--KGVLTN-- 159 (467)
T ss_pred ccceEeecCCCceeeee-eecc-cceEEEecccccCcchhHHHHHHHHHHHh-----hcCCEEEE-eccc--cccchh--
Confidence 34456666666666521 2222 23566666554443 34555555555321 35678888 3333 367655
Q ss_pred hHHHHHHHHHHcCcEEEEe
Q 018240 158 YTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 158 ~l~~i~~~~~~~~~~li~D 176 (359)
.+.+.++|++.|+++++|
T Consensus 160 -~q~~I~~ar~~~~pVLvD 177 (467)
T COG2870 160 -VQKMIDLAREAGIPVLVD 177 (467)
T ss_pred -HHHHHHHHHHcCCcEEEC
Confidence 899999999999999999
No 400
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=72.41 E-value=33 Score=27.83 Aligned_cols=154 Identities=18% Similarity=0.166 Sum_probs=86.6
Q ss_pred eEEcCCchHHHHHHHHHhhhhcCCeEE-----ecCCC--cce---eec-cccccccCCccceeeecCCCCCCCHHHHHHH
Q 018240 56 GLFVPSGTMGNLISVLVHCETRGSEVI-----LGDNS--HIH---IYE-NGGISTIGGVHPRTVKNNQDGTMDIDLIEAA 124 (359)
Q Consensus 56 ~~~~~~gt~a~~~~l~~~~~~~g~~vl-----~~~~~--~~~---~~~-~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~ 124 (359)
+.++++|-.+..++..++. .|-.|. .+... |.. ... ....++..|..++.........-..++|.+.
T Consensus 4 ~aL~SGGKDS~~Al~~a~~--~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~L~~~ 81 (223)
T COG2102 4 IALYSGGKDSFYALYLALE--EGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEELKEA 81 (223)
T ss_pred EEEEecCcHHHHHHHHHHH--cCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHHHHHH
Confidence 4678888888666666554 443321 22221 111 111 0012445677766665443233367888888
Q ss_pred hcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHh----h-hcCcc
Q 018240 125 IRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRR----L-VQAAD 199 (359)
Q Consensus 125 l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~----~-~~~~d 199 (359)
+++ -+...|+. |.+++......+-.+|++.|+..+.=- + +.++.. + ..+.+
T Consensus 82 l~~-------l~~d~iv~--------GaI~s~yqk~rve~lc~~lGl~~~~PL-------W--g~d~~ell~e~~~~Gf~ 137 (223)
T COG2102 82 LRR-------LKVDGIVA--------GAIASEYQKERVERLCEELGLKVYAPL-------W--GRDPEELLEEMVEAGFE 137 (223)
T ss_pred HHh-------CcccEEEE--------chhhhHHHHHHHHHHHHHhCCEEeecc-------c--CCCHHHHHHHHHHcCCe
Confidence 885 23334433 889999999999999999998765432 1 222222 2 24678
Q ss_pred EEEEeccccCCCceeeEE--ecCHHHHHHHHHHHHhhCCC
Q 018240 200 SASVCLSKGLGAPVGSVI--VGSKEFIKKARRLRKTLGGG 237 (359)
Q Consensus 200 ~~~~s~~K~~g~~~gg~~--~~~~~~~~~~~~~~~~~~~~ 237 (359)
+++.+.+|. |.+. .|+ -.+.+..+.+..+...++.+
T Consensus 138 ~~Iv~Vsa~-gL~~-~~lGr~i~~~~~e~l~~l~~~ygi~ 175 (223)
T COG2102 138 AIIVAVSAE-GLDE-SWLGRRIDREFLEELKSLNRRYGIH 175 (223)
T ss_pred EEEEEEecc-CCCh-HHhCCccCHHHHHHHHHHHHhcCCC
Confidence 777777773 3221 222 23566777776665555443
No 401
>PF00265 TK: Thymidine kinase; InterPro: IPR001267 Thymidine kinase (TK) (2.7.1.21 from EC) is an ubiquitous enzyme that catalyzes the ATP-dependent phosphorylation of thymidine. Two different families of Thymidine kinase have been identified [, ] and are represented in this entry; one groups together Thymidine kinase from herpesviruses, as well as cytosolic thymidylate kinases and the second family groups Thymidine kinase from various sources that include, vertebrates, bacteria, the Bacteriophage T4, poxviruses, African swine fever virus (ASFV) and Fish lymphocystis disease virus (FLDV). The major capsid protein of insect iridescent viruses also belongs to this family.; GO: 0004797 thymidine kinase activity, 0005524 ATP binding; PDB: 1XX6_B 2J9R_A 2J87_B 3E2I_A 2JA1_A 2UZ3_B 2B8T_B 2WVJ_A 1W4R_F 1XBT_F ....
Probab=71.76 E-value=19 Score=28.21 Aligned_cols=98 Identities=12% Similarity=0.141 Sum_probs=59.1
Q ss_pred CCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceee--ecCCCCCCCHHHHHHHhcCCCCCccCCce
Q 018240 60 PSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTV--KNNQDGTMDIDLIEAAIRDPKGEIVYPTT 137 (359)
Q Consensus 60 ~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 137 (359)
++=|+.++..+..+. ..|.++++..|..-..+....+....|.....+ +.. +..++.+.+. .++
T Consensus 12 sGKS~eLi~~~~~~~-~~~~~v~~~kp~~D~R~~~~~I~s~~g~~~~~~~~~~~-----~~~~~~~~~~--------~~~ 77 (176)
T PF00265_consen 12 SGKSTELIRRIHRYE-IAGKKVLVFKPAIDTRYGEDKIVSHDGISLEAIVDPID-----NLFEIIDILE--------NDY 77 (176)
T ss_dssp SSHHHHHHHHHHHHH-HTT-EEEEEEESTSCCCCSSEEEHTTSCEEEEESSEES-----SGGGGGGGCC--------TTC
T ss_pred ChhHHHHHHHHHHHH-hCCCeEEEEEecccCcCCCCeEEecCCCcccccccchh-----hHHHHHHHhc--------cCC
Confidence 344556666666665 477888887776444333112344555544444 222 4445555555 347
Q ss_pred eEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecc
Q 018240 138 RLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 138 ~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.+|.++- ++.++ +++.++.+.+..+|+.|++=+-
T Consensus 78 dvI~IDE------aQFf~-~~i~~l~~~~~~~g~~Vi~~GL 111 (176)
T PF00265_consen 78 DVIGIDE------AQFFD-EQIVQLVEILANKGIPVICAGL 111 (176)
T ss_dssp SEEEESS------GGGST-TTHHHHHHHHHHTT-EEEEEEE
T ss_pred CEEEEec------hHhhH-HHHHHHHHHHHhCCCeEEEEee
Confidence 7888844 45666 7899999999999999998753
No 402
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=70.92 E-value=16 Score=23.04 Aligned_cols=46 Identities=17% Similarity=0.194 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhcCcee--ccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 303 YAACLLKKLEEHGVLV--MPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~--~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
-..++.+.|.+.||.+ ...+...+++++ ..++++.+.+++.|-+.+
T Consensus 17 v~~ki~~~L~~~~I~v~~i~~~~s~~~is~--~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 17 VLARGLAALAEAGIEPIAAHQSMRNVDVQF--VVDRDDYDNAIKALHAAL 64 (66)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCCeeEEEE--EEEHHHHHHHHHHHHHHH
Confidence 4557888889999988 455556678887 688999999999987654
No 403
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=70.87 E-value=11 Score=32.40 Aligned_cols=61 Identities=13% Similarity=0.010 Sum_probs=43.1
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEE
Q 018240 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHI 175 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~ 175 (359)
|.++++.+|.+.+++.++...+ .++..|++..+. .-+..++.++..++.+.+.+. .++||+
T Consensus 11 Pf~~dg~iD~~~l~~l~~~l~~----~Gv~gi~v~Gst--GE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~ 74 (289)
T cd00951 11 HFDADGSFDEDAYRAHVEWLLS----YGAAALFAAGGT--GEFFSLTPDEYAQVVRAAVEETAGRVPVLA 74 (289)
T ss_pred CCCCCCCcCHHHHHHHHHHHHH----cCCCEEEECcCC--cCcccCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 6678899999998888875332 356677763332 336788889999999877664 466665
No 404
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=70.26 E-value=32 Score=30.52 Aligned_cols=107 Identities=13% Similarity=0.026 Sum_probs=57.4
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEe-ccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLE-NTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRR 193 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~-~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~ 193 (359)
.++++++.+++...+. .+..+++++ .+...|+-. +..-++..|..+.+.+++++++|-.|+.|..... ......
T Consensus 236 ~t~~e~~~Ave~i~~~---Gn~~i~L~erg~s~yp~~~-~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G~r~~~~~~a~aA 311 (360)
T PRK12595 236 ATIEEFIYAAEYIMSQ---GNGQIILCERGIRTYEKAT-RNTLDISAVPILKQETHLPVMVDVTHSTGRRDLLLPTAKAA 311 (360)
T ss_pred CCHHHHHHHHHHHHHC---CCCCEEEECCccCCCCCCC-CCCcCHHHHHHHHHHhCCCEEEeCCCCCcchhhHHHHHHHH
Confidence 3777777766543222 234566664 333334221 1122688888888889999999998876522110 122333
Q ss_pred hhcCccEEE--EeccccCCCceeeEEecCHHHHHH
Q 018240 194 LVQAADSAS--VCLSKGLGAPVGSVIVGSKEFIKK 226 (359)
Q Consensus 194 ~~~~~d~~~--~s~~K~~g~~~gg~~~~~~~~~~~ 226 (359)
...++|-+. ..+.|...++=+..-+.++++.+-
T Consensus 312 va~GAdg~~iE~H~dp~~a~~D~~~sl~p~el~~l 346 (360)
T PRK12595 312 LAIGADGVMAEVHPDPAVALSDSAQQMDIPEFDRF 346 (360)
T ss_pred HHcCCCeEEEEecCCCCCCCCchhhhCCHHHHHHH
Confidence 445787333 355565554444333344444333
No 405
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=69.28 E-value=12 Score=32.25 Aligned_cols=70 Identities=11% Similarity=-0.021 Sum_probs=47.1
Q ss_pred cCCccceee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEE
Q 018240 100 IGGVHPRTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHI 175 (359)
Q Consensus 100 ~~g~~~~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~ 175 (359)
+.|+-+..+ |.++++.+|.+.+++.++...+ .++..|++..+. .=+..++.++..++.+.+.+. .+++|+
T Consensus 8 ~~Gv~~a~vTPf~~dg~iD~~~l~~li~~l~~----~Gv~Gi~~~Gst--GE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 81 (303)
T PRK03620 8 GSGLLSFPVTPFDADGSFDEAAYREHLEWLAP----YGAAALFAAGGT--GEFFSLTPDEYSQVVRAAVETTAGRVPVIA 81 (303)
T ss_pred cCceEEeeeCCCCCCCCcCHHHHHHHHHHHHH----cCCCEEEECcCC--cCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 345444444 7778899999999988875322 356677763332 235678889999999877654 356665
No 406
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=69.25 E-value=13 Score=31.98 Aligned_cols=63 Identities=19% Similarity=0.077 Sum_probs=43.7
Q ss_pred CCccceee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc
Q 018240 101 GGVHPRTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH 169 (359)
Q Consensus 101 ~g~~~~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~ 169 (359)
.|+-+..+ |.++++.+|.+.+++.++...+ .++..+++..+. .=+..++.++..++.+.+.+.
T Consensus 7 ~Gi~~a~vTPf~~dg~iD~~~l~~li~~l~~----~Gv~gi~v~Gst--GE~~~Lt~eEr~~v~~~~~~~ 70 (296)
T TIGR03249 7 SGLLSFPVTPFDADGSFDEAAYRENIEWLLG----YGLEALFAAGGT--GEFFSLTPAEYEQVVEIAVST 70 (296)
T ss_pred CceEEeeeCCcCCCCCcCHHHHHHHHHHHHh----cCCCEEEECCCC--cCcccCCHHHHHHHHHHHHHH
Confidence 45444444 7788899999998888875432 356677763332 235778889999999877664
No 407
>PRK04296 thymidine kinase; Provisional
Probab=68.72 E-value=57 Score=25.84 Aligned_cols=96 Identities=15% Similarity=0.143 Sum_probs=50.6
Q ss_pred HHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEec
Q 018240 65 GNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLEN 144 (359)
Q Consensus 65 a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~ 144 (359)
.+...+..+. ..|.+|++..|.....+....+....|..+..+... ..+++.+.+.+ .. .+..+|+++-
T Consensus 18 ~~l~~~~~~~-~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~~-----~~~~~~~~~~~--~~---~~~dvviIDE 86 (190)
T PRK04296 18 ELLQRAYNYE-ERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAIPVS-----SDTDIFELIEE--EG---EKIDCVLIDE 86 (190)
T ss_pred HHHHHHHHHH-HcCCeEEEEeccccccccCCcEecCCCCcccceEeC-----ChHHHHHHHHh--hC---CCCCEEEEEc
Confidence 3333444444 367777766553111110012344445433322111 34445444442 00 4667888866
Q ss_pred cccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018240 145 THANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 145 ~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
. ..++.+++.++.+.++..|+.+|+=+
T Consensus 87 a------q~l~~~~v~~l~~~l~~~g~~vi~tg 113 (190)
T PRK04296 87 A------QFLDKEQVVQLAEVLDDLGIPVICYG 113 (190)
T ss_pred c------ccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 5 34556668888888888998888864
No 408
>PLN02417 dihydrodipicolinate synthase
Probab=67.88 E-value=13 Score=31.59 Aligned_cols=62 Identities=11% Similarity=0.063 Sum_probs=43.1
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEEe
Q 018240 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHID 176 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~D 176 (359)
|.++++.+|.+.+++.++...+ .++..|++..+. .-+..++.++..++.+.+.+. .+.+++-
T Consensus 12 Pf~~~g~iD~~~~~~~i~~l~~----~Gv~Gi~~~Gst--GE~~~ls~~Er~~~~~~~~~~~~~~~pvi~g 76 (280)
T PLN02417 12 PYLPDGRFDLEAYDSLVNMQIE----NGAEGLIVGGTT--GEGQLMSWDEHIMLIGHTVNCFGGKIKVIGN 76 (280)
T ss_pred CcCCCCCcCHHHHHHHHHHHHH----cCCCEEEECccC--cchhhCCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 6778899999998888875322 356677773333 236778889999999877664 3555544
No 409
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=67.20 E-value=15 Score=31.55 Aligned_cols=60 Identities=15% Similarity=0.127 Sum_probs=41.6
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEE
Q 018240 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLH 174 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li 174 (359)
|.++++.+|.+.+++.++...+ .++..|++..+. .-+..++.+|..++.+.+.+. .+.|+
T Consensus 11 Pf~~dg~iD~~~l~~lv~~~~~----~Gv~gi~v~Gst--GE~~~Ls~~Er~~l~~~~~~~~~g~~pvi 73 (294)
T TIGR02313 11 PFKRNGDIDEEALRELIEFQIE----GGSHAISVGGTS--GEPGSLTLEERKQAIENAIDQIAGRIPFA 73 (294)
T ss_pred CcCCCCCcCHHHHHHHHHHHHH----cCCCEEEECccC--cccccCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 7788899999999988875322 356677763333 336778889999998876543 35555
No 410
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=66.47 E-value=16 Score=31.29 Aligned_cols=62 Identities=21% Similarity=0.192 Sum_probs=42.5
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCc-eeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEEe
Q 018240 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPT-TRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHID 176 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~D 176 (359)
|.++++.+|.+.+++.++...+ .+ ...|++..+. .-+..++.++..++.+.+.+. .+.|++=
T Consensus 11 Pf~~dg~iD~~~~~~~i~~~i~----~G~v~gi~~~Gst--GE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~g 76 (290)
T TIGR00683 11 SFNEDGTINEKGLRQIIRHNID----KMKVDGLYVGGST--GENFMLSTEEKKEIFRIAKDEAKDQIALIAQ 76 (290)
T ss_pred CCCCCCCcCHHHHHHHHHHHHh----CCCcCEEEECCcc--cccccCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 6778899999999888875322 34 6677763333 336678889999999877665 3555543
No 411
>cd04920 ACT_AKiii-DAPDC_2 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC). This CD includes the second of two ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein. Aspartokinase (AK) is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The lysA gene encodes the enzyme DAPDC, a pyridoxal-5'-phosphate (PLP)-dependent enzyme which catalyzes the final step in the lysine biosynthetic pathway converting meso-diaminopimelic acid (DAP) to l-lysine. Tandem ACT domains are positioned centrally with the AK catalytic domain N-terminal and the DAPDC domains C-terminal. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=66.47 E-value=17 Score=22.69 Aligned_cols=45 Identities=4% Similarity=0.077 Sum_probs=35.0
Q ss_pred HHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 304 AACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 304 ~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
..++.+.|.+.+|.+...+...+++++ ..++++.++++.+|-+.+
T Consensus 17 ~~~~~~~L~~~~i~~i~~~~s~~~is~--vv~~~d~~~av~~LH~~f 61 (63)
T cd04920 17 LGPALEVFGKKPVHLVSQAANDLNLTF--VVDEDQADGLCARLHFQL 61 (63)
T ss_pred HHHHHHHHhcCCceEEEEeCCCCeEEE--EEeHHHHHHHHHHHHHHH
Confidence 457777787788888777777788887 688899999998886654
No 412
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=66.45 E-value=14 Score=31.88 Aligned_cols=72 Identities=18% Similarity=0.211 Sum_probs=47.7
Q ss_pred ccCCccceee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc--C-cEEE
Q 018240 99 TIGGVHPRTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH--G-LKLH 174 (359)
Q Consensus 99 ~~~g~~~~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~--~-~~li 174 (359)
.+.|.-+-.+ |.++++.+|.+.+++.++...+ .++..|++..+.. -+..++.+|..++.+.+.+. | +++|
T Consensus 4 ~~~Gvi~a~vTPF~~dg~vD~~a~~~lv~~li~----~Gv~gi~~~GttG--E~~~Ls~eEr~~v~~~~v~~~~grvpvi 77 (299)
T COG0329 4 KFKGVIPALVTPFDEDGSVDEEALRRLVEFLIA----AGVDGLVVLGTTG--ESPTLTLEERKEVLEAVVEAVGGRVPVI 77 (299)
T ss_pred ccCcceeccccCCCCCCCcCHHHHHHHHHHHHH----cCCCEEEECCCCc--cchhcCHHHHHHHHHHHHHHHCCCCcEE
Confidence 3445444444 6666788999998888875432 3566777734333 35678889999999998876 2 5555
Q ss_pred Ee
Q 018240 175 ID 176 (359)
Q Consensus 175 ~D 176 (359)
+=
T Consensus 78 aG 79 (299)
T COG0329 78 AG 79 (299)
T ss_pred Ee
Confidence 54
No 413
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=63.62 E-value=18 Score=30.97 Aligned_cols=60 Identities=12% Similarity=0.085 Sum_probs=42.0
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEE
Q 018240 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLH 174 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li 174 (359)
|.++++.+|.+.+++.++...+ .+...+++..+. .-+..++.++..++.+.+.+. .+.|+
T Consensus 12 Pf~~dg~iD~~~l~~~i~~l~~----~Gv~gi~~~Gs~--GE~~~ls~~Er~~~~~~~~~~~~~~~~vi 74 (292)
T PRK03170 12 PFKEDGSVDFAALRKLVDYLIA----NGTDGLVVVGTT--GESPTLTHEEHEELIRAVVEAVNGRVPVI 74 (292)
T ss_pred CcCCCCCcCHHHHHHHHHHHHH----cCCCEEEECCcC--CccccCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 7778899999998888875322 356677763332 336778889999999877664 34554
No 414
>PRK10785 maltodextrin glucosidase; Provisional
Probab=63.58 E-value=11 Score=35.98 Aligned_cols=58 Identities=16% Similarity=0.152 Sum_probs=43.0
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceec-------------ChhhHHHHHHHHHHcCcEEEEecc
Q 018240 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCL-------------SVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~-------------~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
|++-+.+.|+-..+ -++.+|++.|+..+|+..-| +.++++++++.|+++|+.||.|-+
T Consensus 177 Dl~GI~~kLdYL~~----LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V 247 (598)
T PRK10785 177 DLDGISEKLPYLKK----LGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGV 247 (598)
T ss_pred CHHHHHHHHHHHHH----cCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 77777777753221 46789999887766654322 236899999999999999999976
No 415
>PF04002 RadC: RadC-like JAB domain; InterPro: IPR001405 This family was named initially with reference to the Escherichia coli radC102 mutation which suggested that RadC was involved in repair of DNA lesions []. However the relevant mutation has subsequently been shown to be in recG, not radC []. In addition all attempts to characterise a radiation-related function for RadC in Streptococcus pneumoniae failed, suggesting that it is not involved in repair of DNA lesions, in recombination during transformation, in gene conversion, nor in mismatch repair [].; PDB: 2QLC_A.
Probab=63.38 E-value=21 Score=26.01 Aligned_cols=47 Identities=19% Similarity=0.253 Sum_probs=25.5
Q ss_pred CHH-HHHHHhcCCCCCccCCceeEEEEeccccCCCceecCh-hhH---HHHHHHHHHcCcEE
Q 018240 117 DID-LIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSV-EYT---DSVGEIAKKHGLKL 173 (359)
Q Consensus 117 ~~~-~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~-~~l---~~i~~~~~~~~~~l 173 (359)
++. -++.++. .+...|++.|.+ |.|.+.|. +|+ ++|.+.|+.-|+.+
T Consensus 52 ~~R~I~~~al~--------~~A~~vIl~HNH--PsG~~~PS~~D~~~T~~L~~~~~~l~I~l 103 (123)
T PF04002_consen 52 DPREIFRRALR--------LNASSVILAHNH--PSGDPEPSDADIALTRRLKKAARLLGIEL 103 (123)
T ss_dssp SHHHHHHHHHH--------TT-SEEEEEEE---TTS--S--HHHHHHHHHHHHHHHHHT-EE
T ss_pred cHHHHHHHHHh--------hCCceEEEEEEc--CCCCCCCCHhHHHHHHHHHHHHHHcCCee
Confidence 444 4677777 455566663433 77887554 666 67777777766543
No 416
>cd04937 ACT_AKi-DapG-BS_2 ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI. This CD includes the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) strain 168), Clostridia, and Actinobacteria bacterial species. In B. subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive AK isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The BS AKI is tetrameric consisting of two alpha and two beta subunits; th
Probab=62.72 E-value=22 Score=22.09 Aligned_cols=46 Identities=15% Similarity=0.364 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 303 YAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
-..++.+.|.+.||.+......-..+++ ..++++.++++++|.+.+
T Consensus 17 i~~~if~aL~~~~I~v~~~~~Se~~is~--~v~~~~~~~av~~Lh~~f 62 (64)
T cd04937 17 VMAKIVGALSKEGIEILQTADSHTTISC--LVSEDDVKEAVNALHEAF 62 (64)
T ss_pred HHHHHHHHHHHCCCCEEEEEcCccEEEE--EEcHHHHHHHHHHHHHHh
Confidence 3557888899999988544445567776 578899999888887654
No 417
>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=62.49 E-value=56 Score=27.04 Aligned_cols=97 Identities=19% Similarity=0.286 Sum_probs=49.2
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh-Hhhh
Q 018240 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV-RRLV 195 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~ 195 (359)
+++++...+. .++.||+.-|..++|..+ ++.+..+..+-+ +|+|+--++ ....... ..+.
T Consensus 49 sl~el~~~L~---------~pr~vWlMvPag~it~~v-----i~~la~~L~~GD--ivIDGGNS~---y~Ds~rr~~~l~ 109 (300)
T COG1023 49 SLDELVAKLS---------APRIVWLMVPAGDITDAV-----IDDLAPLLSAGD--IVIDGGNSN---YKDSLRRAKLLA 109 (300)
T ss_pred CHHHHHHhcC---------CCcEEEEEccCCCchHHH-----HHHHHhhcCCCC--EEEECCccc---hHHHHHHHHHHH
Confidence 5566666555 456677655665565444 566666665555 677863211 1111111 1121
Q ss_pred -cCccEEEEeccccC-CCcee-eEEec-CHHHHHHHHHHHH
Q 018240 196 -QAADSASVCLSKGL-GAPVG-SVIVG-SKEFIKKARRLRK 232 (359)
Q Consensus 196 -~~~d~~~~s~~K~~-g~~~g-g~~~~-~~~~~~~~~~~~~ 232 (359)
.+.+++=.+.|=.. |...| +++++ +.+..+.+..+-.
T Consensus 110 ~kgi~flD~GTSGG~~G~~~G~~lMiGG~~~a~~~~~pif~ 150 (300)
T COG1023 110 EKGIHFLDVGTSGGVWGAERGYCLMIGGDEEAVERLEPIFK 150 (300)
T ss_pred hcCCeEEeccCCCCchhhhcCceEEecCcHHHHHHHHHHHH
Confidence 24455544433322 44445 66665 7777777665444
No 418
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=61.97 E-value=28 Score=28.21 Aligned_cols=50 Identities=16% Similarity=0.317 Sum_probs=35.6
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecc
Q 018240 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.+.++++++ .+..++-+=. -+..+-.. .+..+++.++|++|++.+++++-
T Consensus 24 ~~~ve~al~--------~Gv~~vQlR~-K~~~~~~~--~~~a~~~~~lc~~~~v~liINd~ 73 (211)
T COG0352 24 LEWVEAALK--------GGVTAVQLRE-KDLSDEEY--LALAEKLRALCQKYGVPLIINDR 73 (211)
T ss_pred HHHHHHHHh--------CCCeEEEEec-CCCChHHH--HHHHHHHHHHHHHhCCeEEecCc
Confidence 789999999 6777777622 22111111 45678999999999999999863
No 419
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=61.88 E-value=20 Score=24.68 Aligned_cols=62 Identities=18% Similarity=0.117 Sum_probs=36.4
Q ss_pred cccCCccceeeecCCCCCCCHH--HHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEE
Q 018240 98 STIGGVHPRTVKNNQDGTMDID--LIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 98 ~~~~g~~~~~v~~~~~~~~~~~--~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 175 (359)
++..|.+.+.. ..++..... .|+..+. ++.+|++.+-. .+-+-...+.+.|+++|++++.
T Consensus 19 ~~~~G~~~~~h--g~~~~~~~~~~~l~~~i~---------~aD~VIv~t~~-------vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 19 LEKYGGKLIHH--GRDGGDEKKASRLPSKIK---------KADLVIVFTDY-------VSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred HHHcCCEEEEE--ecCCCCccchhHHHHhcC---------CCCEEEEEeCC-------cChHHHHHHHHHHHHcCCcEEE
Confidence 55566666666 222222333 4777776 34455551211 1233478999999999999886
Q ss_pred ec
Q 018240 176 DG 177 (359)
Q Consensus 176 D~ 177 (359)
=.
T Consensus 81 ~~ 82 (97)
T PF10087_consen 81 SR 82 (97)
T ss_pred EC
Confidence 54
No 420
>cd04918 ACT_AK1-AT_2 ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1). This CD includes the second of two ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1), which can be synergistically inhibited by S-adenosylmethionine (SAM). This isoenzyme is found in higher plants, Arabidopsis thaliana (AT) and Zea mays, and also in Chlorophyta. In its inactive state, Arabidopsis AK1 binds the effectors lysine and SAM (two molecules each) at the interface of two ACT1 domain subunits. The second ACT domain (ACT2), this CD, does not interact with an effector. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=61.50 E-value=27 Score=21.86 Aligned_cols=46 Identities=15% Similarity=0.293 Sum_probs=34.1
Q ss_pred HHHHHHHHHHhcCcee--ccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 303 YAACLLKKLEEHGVLV--MPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~--~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
-..++.+.|.+.||.+ ...+.....+++ ..++++.+.+++.|.+.+
T Consensus 16 ~~~~i~~aL~~~~I~v~~i~~g~s~~sis~--~v~~~~~~~av~~Lh~~f 63 (65)
T cd04918 16 ILERAFHVLYTKGVNVQMISQGASKVNISL--IVNDSEAEGCVQALHKSF 63 (65)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCccceEEE--EEeHHHHHHHHHHHHHHH
Confidence 3457888889999887 444455667777 578899999988887654
No 421
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=61.09 E-value=46 Score=27.96 Aligned_cols=94 Identities=12% Similarity=0.145 Sum_probs=51.7
Q ss_pred EEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCc
Q 018240 57 LFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPT 136 (359)
Q Consensus 57 ~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 136 (359)
+++.+||.-.......+. +.|-.|+.+.-+-+..- .....|...+.. +.+|.+++.+.+.+ .+
T Consensus 3 ILvlGGT~egr~la~~L~-~~g~~v~~s~~t~~~~~----~~~~~g~~~v~~-----g~l~~~~l~~~l~~-------~~ 65 (256)
T TIGR00715 3 VLLMGGTVDSRAIAKGLI-AQGIEILVTVTTSEGKH----LYPIHQALTVHT-----GALDPQELREFLKR-------HS 65 (256)
T ss_pred EEEEechHHHHHHHHHHH-hCCCeEEEEEccCCccc----cccccCCceEEE-----CCCCHHHHHHHHHh-------cC
Confidence 667788766666666666 36766665554322111 122222222222 23577888888875 45
Q ss_pred eeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEE
Q 018240 137 TRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLH 174 (359)
Q Consensus 137 ~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li 174 (359)
+.+|+- .++ |.-...+ +-+.+.|++.|+..+
T Consensus 66 i~~VID-AtH--PfA~~is----~~a~~a~~~~~ipyl 96 (256)
T TIGR00715 66 IDILVD-ATH--PFAAQIT----TNATAVCKELGIPYV 96 (256)
T ss_pred CCEEEE-cCC--HHHHHHH----HHHHHHHHHhCCcEE
Confidence 665543 323 3333333 566678888887654
No 422
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=60.75 E-value=22 Score=30.30 Aligned_cols=55 Identities=24% Similarity=0.168 Sum_probs=39.2
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc
Q 018240 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH 169 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~ 169 (359)
|.++++.+|.+.+++.++...+ .+...+++..+. .-+..++.++..++.+.+.+.
T Consensus 11 Pf~~dg~iD~~~~~~~i~~l~~----~Gv~gl~v~Gst--GE~~~lt~~Er~~l~~~~~~~ 65 (284)
T cd00950 11 PFKDDGSVDFDALERLIEFQIE----NGTDGLVVCGTT--GESPTLSDEEHEAVIEAVVEA 65 (284)
T ss_pred CcCCCCCcCHHHHHHHHHHHHH----cCCCEEEECCCC--cchhhCCHHHHHHHHHHHHHH
Confidence 6678899999988888875322 356677763333 235678889999999887766
No 423
>TIGR03586 PseI pseudaminic acid synthase.
Probab=60.26 E-value=70 Score=27.97 Aligned_cols=111 Identities=14% Similarity=0.181 Sum_probs=62.6
Q ss_pred cceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEE-EEecccccc
Q 018240 104 HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKL-HIDGARIFN 182 (359)
Q Consensus 104 ~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~l-i~D~a~~~~ 182 (359)
+++.+... .-++++++.+++-..+. .+..++++..+.++|+ ....-+|..|..+.++++.+| +.| |..|
T Consensus 135 kPvilstG---~~t~~Ei~~Av~~i~~~---g~~~i~LlhC~s~YP~--~~~~~nL~~i~~lk~~f~~pVG~SD--Ht~G 204 (327)
T TIGR03586 135 KPIIMSTG---IATLEEIQEAVEACREA---GCKDLVLLKCTSSYPA--PLEDANLRTIPDLAERFNVPVGLSD--HTLG 204 (327)
T ss_pred CcEEEECC---CCCHHHHHHHHHHHHHC---CCCcEEEEecCCCCCC--CcccCCHHHHHHHHHHhCCCEEeeC--CCCc
Confidence 45555332 23777777766543211 1234666644555453 444457888888888999888 777 5444
Q ss_pred hhhhcCchhHhhhcCccEEEE--eccccCCCceeeEEecCHHHHHHHH
Q 018240 183 AAVALGVPVRRLVQAADSASV--CLSKGLGAPVGSVIVGSKEFIKKAR 228 (359)
Q Consensus 183 ~~~~~~~~~~~~~~~~d~~~~--s~~K~~g~~~gg~~~~~~~~~~~~~ 228 (359)
. ..+......+++++=- ++.|.+.++-...-+.++++.+.++
T Consensus 205 ~----~~~~aAva~GA~iIEkH~tld~~l~G~D~~~Sl~p~e~~~lv~ 248 (327)
T TIGR03586 205 I----LAPVAAVALGACVIEKHFTLDRSDGGVDSAFSLEPDEFKALVK 248 (327)
T ss_pred h----HHHHHHHHcCCCEEEeCCChhhcCCCCChhccCCHHHHHHHHH
Confidence 2 2234444567886643 7778775554443444555444433
No 424
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=60.21 E-value=22 Score=30.64 Aligned_cols=59 Identities=14% Similarity=0.157 Sum_probs=37.6
Q ss_pred CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecc
Q 018240 114 GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 114 ~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
..++.+++++.+++..... .+-.+|++. .+-|-|.. .++..++.++|++.|+.+++|..
T Consensus 109 p~is~~~~~~~l~~~~~~l--~~~d~Vvls--GSlP~g~~--~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 109 PEISEAELEQFLEQLKALL--ESDDIVVLS--GSLPPGVP--PDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred CCCCHHHHHHHHHHHHHhc--ccCCEEEEe--CCCCCCCC--HHHHHHHHHHHHhcCCeEEEECC
Confidence 3456655555444321101 233456663 33365664 67899999999999999999975
No 425
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=60.14 E-value=23 Score=32.92 Aligned_cols=23 Identities=17% Similarity=0.104 Sum_probs=21.2
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018240 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++++++++.|+++|+.||+|-+
T Consensus 80 ~~dl~~Li~~~H~~Gi~vi~D~V 102 (479)
T PRK09441 80 KEELLNAIDALHENGIKVYADVV 102 (479)
T ss_pred HHHHHHHHHHHHHCCCEEEEEEC
Confidence 57899999999999999999976
No 426
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=59.84 E-value=26 Score=30.04 Aligned_cols=71 Identities=20% Similarity=0.172 Sum_probs=46.3
Q ss_pred cCCccceee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEE
Q 018240 100 IGGVHPRTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHI 175 (359)
Q Consensus 100 ~~g~~~~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~ 175 (359)
+.|+-+..+ |.++++.+|.+.+++.++...+. .++..|++..+. .-+..++.++..++.+.+.+. .+.+|+
T Consensus 4 ~~Gv~~a~~TPf~~dg~iD~~~~~~li~~l~~~---~Gv~gi~v~Gst--GE~~~Ls~eEr~~~~~~~~~~~~~~~~via 78 (293)
T PRK04147 4 LKGVYAALLTPFDEDGQIDEQGLRRLVRFNIEK---QGIDGLYVGGST--GEAFLLSTEEKKQVLEIVAEEAKGKVKLIA 78 (293)
T ss_pred CCceeeeeECcCCCCCCcCHHHHHHHHHHHHhc---CCCCEEEECCCc--cccccCCHHHHHHHHHHHHHHhCCCCCEEe
Confidence 345444334 77788999999999998864320 245566663322 235678889999999887764 345554
No 427
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=59.69 E-value=28 Score=29.80 Aligned_cols=61 Identities=18% Similarity=0.223 Sum_probs=42.3
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCC-ceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEE
Q 018240 109 KNNQDGTMDIDLIEAAIRDPKGEIVYP-TTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHI 175 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~ 175 (359)
|.++++.+|.+.+++.++...+ . +...|++..+. .-+..++.++..++.+.+.+. .+.+|+
T Consensus 11 Pf~~dg~iD~~~~~~~i~~l~~----~~Gv~gi~~~Gst--GE~~~Lt~~Er~~~~~~~~~~~~~~~~via 75 (288)
T cd00954 11 PFDENGEINEDVLRAIVDYLIE----KQGVDGLYVNGST--GEGFLLSVEERKQIAEIVAEAAKGKVTLIA 75 (288)
T ss_pred CCCCCCCCCHHHHHHHHHHHHh----cCCCCEEEECcCC--cCcccCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 6778899999998888875432 3 45677763333 235678889999999877664 355555
No 428
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=59.66 E-value=36 Score=27.84 Aligned_cols=60 Identities=15% Similarity=0.148 Sum_probs=35.5
Q ss_pred cccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEE
Q 018240 98 STIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 98 ~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 175 (359)
.+..|++++..+.+ |.+.|.+.++. ...|++..+..++ ...+.-..+++.|++.|+..++
T Consensus 40 l~~~g~~vv~~d~~-----~~~~l~~al~g---------~d~v~~~~~~~~~----~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 40 LQALGAEVVEADYD-----DPESLVAALKG---------VDAVFSVTPPSHP----SELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHTTTEEEES-TT------HHHHHHHHTT---------CSEEEEESSCSCC----CHHHHHHHHHHHHHHHT-SEEE
T ss_pred hhcccceEeecccC-----CHHHHHHHHcC---------CceEEeecCcchh----hhhhhhhhHHHhhhccccceEE
Confidence 34467777766555 89999999993 3344442333211 1234567888889888876554
No 429
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=58.93 E-value=97 Score=27.08 Aligned_cols=100 Identities=16% Similarity=0.219 Sum_probs=55.0
Q ss_pred HHHHHHHhhhhcCCeEEecCCCcceeecccccc------ccCCccceeeecCCCC-CCCHHHHHHHhcCCCCCccCCcee
Q 018240 66 NLISVLVHCETRGSEVILGDNSHIHIYENGGIS------TIGGVHPRTVKNNQDG-TMDIDLIEAAIRDPKGEIVYPTTR 138 (359)
Q Consensus 66 ~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~------~~~g~~~~~v~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~ 138 (359)
-+.-+...+.+.|.+|++.... ++..+++. ++.|.+++.-....|. .+-.+.++.+.. .+..
T Consensus 155 TIaKLA~~l~~~g~~VllaA~D---TFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Aka--------r~~D 223 (340)
T COG0552 155 TIAKLAKYLKQQGKSVLLAAGD---TFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKA--------RGID 223 (340)
T ss_pred HHHHHHHHHHHCCCeEEEEecc---hHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHH--------cCCC
Confidence 3333444444688888877643 23322322 3356555543211111 123456666666 5778
Q ss_pred EEEEeccccCCCceecCh-hhHHHHHHHHHHcC------cEEEEecc
Q 018240 139 LICLENTHANCGGRCLSV-EYTDSVGEIAKKHG------LKLHIDGA 178 (359)
Q Consensus 139 ~v~i~~~~~~ptG~~~~~-~~l~~i~~~~~~~~------~~li~D~a 178 (359)
+|++++..--. .-... ++|++|.+++++.. ++++.|..
T Consensus 224 vvliDTAGRLh--nk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAt 268 (340)
T COG0552 224 VVLIDTAGRLH--NKKNLMDELKKIVRVIKKDDPDAPHEILLVLDAT 268 (340)
T ss_pred EEEEeCccccc--CchhHHHHHHHHHHHhccccCCCCceEEEEEEcc
Confidence 89887643211 11111 67899999998865 67777986
No 430
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=58.79 E-value=26 Score=29.76 Aligned_cols=62 Identities=15% Similarity=0.080 Sum_probs=42.5
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEEe
Q 018240 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHID 176 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~D 176 (359)
|.++++.+|.+.+++.++...+ .+...|++..+. .=+..++.++..++.+.+.+. .+.+++=
T Consensus 8 Pf~~dg~iD~~~~~~~i~~l~~----~Gv~gi~~~Gst--GE~~~ls~~Er~~l~~~~~~~~~~~~~vi~g 72 (281)
T cd00408 8 PFTADGEVDLDALRRLVEFLIE----AGVDGLVVLGTT--GEAPTLTDEERKEVIEAVVEAVAGRVPVIAG 72 (281)
T ss_pred CcCCCCCcCHHHHHHHHHHHHH----cCCCEEEECCCC--cccccCCHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 6678899999998888875322 356677763332 336778889999999887665 3555543
No 431
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=58.47 E-value=44 Score=23.73 Aligned_cols=49 Identities=16% Similarity=0.170 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhcCceecc----CC---CcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018240 302 LYAACLLKKLEEHGVLVMP----ES---STRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 302 ~~~~~~~~~l~~~gi~~~~----~~---~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.++..+.+.|.++|+.+.. || .+-.-+-+ +.+++++++.++.|++-+++
T Consensus 11 ~Da~~l~~~L~~~g~~~TkLsstGGFLr~GNtTlli--Gvede~v~~vl~iIk~~c~~ 66 (109)
T PF06153_consen 11 EDADDLSDALNENGFRVTKLSSTGGFLREGNTTLLI--GVEDEKVDEVLEIIKENCKK 66 (109)
T ss_dssp HHHHHHHHHHHHTT--EEEEEEEETTTTEEEEEEEE--EEEGGGHHHHHHHHHHHH--
T ss_pred hhHHHHHHHHHHCCceEEEEecccceeccCCEEEEE--EecHHHHHHHHHHHHHhhcC
Confidence 4899999999999998732 11 11122223 46789999999999987764
No 432
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=57.77 E-value=50 Score=28.74 Aligned_cols=100 Identities=20% Similarity=0.256 Sum_probs=52.1
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcC-cEEEEecccccchhhhcCchhHhh
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHG-LKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~-~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
++.+.+++.++..... ++.+.|++ .-|.|+|.+...+.+.+..+-.++.+ +++.+++.-+-|++ +-
T Consensus 80 ~~~~~~~~~l~~~~~~---~~vk~vvL--~inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~AASGGY------~I-- 146 (317)
T COG0616 80 IGGDDIEEILRAARAD---PSVKAVVL--RINSPGGSVVASELIARALKRLRAKKPVVVSVGGYAASGGY------YI-- 146 (317)
T ss_pred ccHHHHHHHHHHHhcC---CCCceEEE--EEECcCCchhHHHHHHHHHHHHhhcCCEEEEECCeecchhh------hh--
Confidence 3555555555443222 56677766 23338899887766666555555544 66777764222222 11
Q ss_pred hcCccEEEEeccccCCCceeeEEecCHHHHHHHHHH
Q 018240 195 VQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRL 230 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~ 230 (359)
...+|-++.+.+=..| +. |++.....+.+.+++.
T Consensus 147 A~aAd~I~a~p~si~G-SI-GVi~~~~~~~~l~~k~ 180 (317)
T COG0616 147 ALAADKIVADPSSITG-SI-GVISGAPNFEELLEKL 180 (317)
T ss_pred hccCCEEEecCCceee-ec-eeEEecCCHHHHHHhc
Confidence 1256766555444333 23 4455555555554433
No 433
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=56.89 E-value=31 Score=29.48 Aligned_cols=61 Identities=23% Similarity=0.180 Sum_probs=42.2
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc--C-cEEEE
Q 018240 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH--G-LKLHI 175 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~--~-~~li~ 175 (359)
|.++++.+|.+.+++.++...+ .++..+++..+. .-+..++.++..++.+.+.+. | +.+++
T Consensus 9 Pf~~~g~iD~~~~~~~i~~l~~----~Gv~Gi~~~Gst--GE~~~Ls~~Er~~~~~~~~~~~~~~~~vi~ 72 (285)
T TIGR00674 9 PFKEDGSVDFAALEKLIDFQIE----NGTDAIVVVGTT--GESPTLSHEEHKKVIEFVVDLVNGRVPVIA 72 (285)
T ss_pred CcCCCCCcCHHHHHHHHHHHHH----cCCCEEEECccC--cccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 6778899999998888875322 456677763332 235778889999999877664 3 55553
No 434
>PRK11633 cell division protein DedD; Provisional
Probab=56.76 E-value=57 Score=26.74 Aligned_cols=48 Identities=19% Similarity=0.173 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHhcCceecc-----CCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018240 302 LYAACLLKKLEEHGVLVMP-----ESSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 302 ~~~~~~~~~l~~~gi~~~~-----~~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
.+++.+...|+..|+.... .++.+.|+-+.+..++++.+.....|++.
T Consensus 161 ~~A~~l~~kL~~~G~~Ay~~~~~~~~G~~tRV~VGP~~sk~~ae~~~~~Lk~~ 213 (226)
T PRK11633 161 DKVNEIVAKLRLSGYRVYTVPSTPVQGKITRIYVGPDASKDKLKGSLGELKQL 213 (226)
T ss_pred HHHHHHHHHHHHCCCeeEEEeeecCCCcEEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 4788999999999987622 33457788888899999999999999874
No 435
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=56.76 E-value=40 Score=21.10 Aligned_cols=48 Identities=25% Similarity=0.323 Sum_probs=28.4
Q ss_pred CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEE
Q 018240 113 DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 113 ~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 175 (359)
++..+++++.+...+ .+...+.+ +-+++..| ..++.++++++|+.++.
T Consensus 12 ~~~~~~~~~~~~a~~-------~g~~~v~i-TDh~~~~~-------~~~~~~~~~~~gi~~i~ 59 (67)
T smart00481 12 DGALSPEELVKRAKE-------LGLKAIAI-TDHGNLFG-------AVEFYKAAKKAGIKPII 59 (67)
T ss_pred cccCCHHHHHHHHHH-------cCCCEEEE-eeCCcccC-------HHHHHHHHHHcCCeEEE
Confidence 344567776666664 56777777 33332222 35666777778776653
No 436
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=56.59 E-value=1.3e+02 Score=25.91 Aligned_cols=104 Identities=13% Similarity=0.077 Sum_probs=59.3
Q ss_pred CeEEcCCchHHHHHHHHHhhhhcCC--eEEec--CCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCC
Q 018240 55 AGLFVPSGTMGNLISVLVHCETRGS--EVILG--DNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKG 130 (359)
Q Consensus 55 ~~~~~~~gt~a~~~~l~~~~~~~g~--~vl~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~ 130 (359)
..++|.+-+.+....+..+.. ++. +|++. +|.+.+... +...+..|+++..+... ..-..++
T Consensus 121 ~~IlTh~~S~~v~~~l~~A~~-~~k~~~V~VtESRP~~eG~~~-ak~L~~~gI~~~~I~Ds--------a~~~~~~---- 186 (301)
T COG1184 121 DVILTHSFSKTVLEVLKTAAD-RGKRFKVIVTESRPRGEGRIM-AKELRQSGIPVTVIVDS--------AVGAFMS---- 186 (301)
T ss_pred CEEEEecCcHHHHHHHHHhhh-cCCceEEEEEcCCCcchHHHH-HHHHHHcCCceEEEech--------HHHHHHH----
Confidence 348888888888888888884 665 45553 444332221 12234567777766422 2233333
Q ss_pred CccCCceeEEEE--eccccCCCceecChhhHHHHHHHHHHcCcEEEEe-ccc
Q 018240 131 EIVYPTTRLICL--ENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHID-GAR 179 (359)
Q Consensus 131 ~~~~~~~~~v~i--~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D-~a~ 179 (359)
+...|++ +....| |.+++.---.-|+..|++.+.++++= ++|
T Consensus 187 -----~vd~VivGad~I~~n--G~lvnkiGT~~lA~~A~e~~~Pf~v~aesy 231 (301)
T COG1184 187 -----RVDKVLVGADAILAN--GALVNKIGTSPLALAARELRVPFYVVAESY 231 (301)
T ss_pred -----hCCEEEECccceecC--CcEEeccchHHHHHHHHHhCCCEEEEeeee
Confidence 2223333 223332 55555555577888899999887765 443
No 437
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=55.94 E-value=54 Score=21.84 Aligned_cols=45 Identities=11% Similarity=0.197 Sum_probs=31.1
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018240 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
.++..+.+++ .+.++|++..... ..-.+.+..+|++++++++.-+
T Consensus 16 ~~~v~kai~~-------gkaklViiA~D~~--------~~~~~~i~~~c~~~~Vp~~~~~ 60 (82)
T PRK13602 16 TKQTVKALKR-------GSVKEVVVAEDAD--------PRLTEKVEALANEKGVPVSKVD 60 (82)
T ss_pred HHHHHHHHHc-------CCeeEEEEECCCC--------HHHHHHHHHHHHHcCCCEEEEC
Confidence 3456666765 6788888833222 2237889999999999987654
No 438
>KOG1251 consensus Serine racemase [Signal transduction mechanisms; Amino acid transport and metabolism]
Probab=55.05 E-value=86 Score=26.04 Aligned_cols=78 Identities=6% Similarity=0.029 Sum_probs=46.2
Q ss_pred EEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCc
Q 018240 57 LFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPT 136 (359)
Q Consensus 57 ~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 136 (359)
+..+||..+--.++.+-...-.-.|++|...--+-.. + .+.+|+.++++.... -+-+.+.+.+. .+
T Consensus 77 ithSSGNHaqAlalaAk~~giPa~IVvP~~AP~~Kv~-a--~~~Yga~ii~~e~~~---~sRE~va~~lt--------ee 142 (323)
T KOG1251|consen 77 ITHSSGNHAQALALAAKILGIPATIVVPKDAPICKVA-A--TRGYGANIIFCEPTV---ESRESVAKDLT--------EE 142 (323)
T ss_pred EeecCCcHHHHHHHHHHhcCCCeEEEecCCChHHHHH-H--HHhcCceEEEecCcc---chHHHHHHHHH--------Hh
Confidence 5667787666666655443344567777766333222 1 455677888774321 25677777777 45
Q ss_pred eeEEEEeccccCC
Q 018240 137 TRLICLENTHANC 149 (359)
Q Consensus 137 ~~~v~i~~~~~~p 149 (359)
+..+++ +|++-|
T Consensus 143 ~g~~~i-~Py~~p 154 (323)
T KOG1251|consen 143 TGYYLI-HPYNHP 154 (323)
T ss_pred cCcEEe-CCCCCc
Confidence 666666 666544
No 439
>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase. This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species.
Probab=53.67 E-value=30 Score=28.86 Aligned_cols=28 Identities=21% Similarity=0.261 Sum_probs=24.5
Q ss_pred ceecChhhHHHHHHHHHHcCc-EEEEecc
Q 018240 151 GRCLSVEYTDSVGEIAKKHGL-KLHIDGA 178 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~-~li~D~a 178 (359)
|++.+.+.++.+.+.+++++. .+++|-+
T Consensus 74 G~l~~~~~~~~i~~~~~~~~~~~vVlDPv 102 (254)
T TIGR00097 74 GMLASAEIVEAVARKLREYPVRPLVVDPV 102 (254)
T ss_pred CCcCCHHHHHHHHHHHHhcCCCcEEECCc
Confidence 788888889999999999999 6999954
No 440
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=53.07 E-value=59 Score=28.38 Aligned_cols=76 Identities=12% Similarity=0.062 Sum_probs=44.8
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEe-ccccC-----CCceecCh-hhHHHHHHHHHHcCcEEEEecccccchhhhcC
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLE-NTHAN-----CGGRCLSV-EYTDSVGEIAKKHGLKLHIDGARIFNAAVALG 188 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~-~~~~~-----ptG~~~~~-~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~ 188 (359)
.+.+..+++++ ....+|.+. .|.++ -+|..+|. .-+.++++.++++++.||.|+-- ...+
T Consensus 159 ~T~e~a~~Li~--------aGAD~ikVgiGpGSicttR~~~Gvg~pqltAv~~~a~aa~~~~v~VIaDGGI-----r~~g 225 (343)
T TIGR01305 159 VTGEMVEELIL--------SGADIVKVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLKGHIISDGGC-----TCPG 225 (343)
T ss_pred cCHHHHHHHHH--------cCCCEEEEcccCCCcccCceeCCCCcCHHHHHHHHHHHhccCCCeEEEcCCc-----Cchh
Confidence 47888888888 455566542 22222 34444343 34445555566678999999731 1223
Q ss_pred chhHhhhcCccEEEEe
Q 018240 189 VPVRRLVQAADSASVC 204 (359)
Q Consensus 189 ~~~~~~~~~~d~~~~s 204 (359)
.-...+..++|.+.++
T Consensus 226 DI~KALA~GAd~VMlG 241 (343)
T TIGR01305 226 DVAKAFGAGADFVMLG 241 (343)
T ss_pred HHHHHHHcCCCEEEEC
Confidence 3355566688877765
No 441
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=53.00 E-value=20 Score=30.60 Aligned_cols=62 Identities=16% Similarity=0.067 Sum_probs=40.7
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEEe
Q 018240 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHID 176 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~D 176 (359)
|.+.++.+|.+.+++.++...+ .++..+++..+. .=+..++.++..++.+.+.++ .+.+++=
T Consensus 12 Pf~~dg~id~~~~~~~i~~l~~----~Gv~gl~~~Gst--GE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~g 76 (289)
T PF00701_consen 12 PFNADGSIDEDALKRLIDFLIE----AGVDGLVVLGST--GEFYSLTDEERKELLEIVVEAAAGRVPVIAG 76 (289)
T ss_dssp -BETTSSB-HHHHHHHHHHHHH----TTSSEEEESSTT--TTGGGS-HHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CCCCCcCcCHHHHHHHHHHHHH----cCCCEEEECCCC--cccccCCHHHHHHHHHHHHHHccCceEEEec
Confidence 6678899999988888774322 356677773332 236778889999999988764 4666663
No 442
>PF07131 DUF1382: Protein of unknown function (DUF1382); InterPro: IPR009814 This entry is represented by Bacteriophage lambda, Xis. This entry overlaps with IPR009750, both representing lambda Xis. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Escherichia coli and Bacteriophage lambda-like proteins of around 60 residues in length. The function of this family is unknown.
Probab=52.84 E-value=31 Score=21.06 Aligned_cols=29 Identities=14% Similarity=0.195 Sum_probs=23.2
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 326 VRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 326 lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
|||.+-+..+++|...+-..+.+-++.+.
T Consensus 24 IRFVpiPv~~dee~~~L~s~~~~kLe~ma 52 (61)
T PF07131_consen 24 IRFVPIPVVTDEEFHTLSSQLSQKLERMA 52 (61)
T ss_pred ceeeccccccHHHHHHHHHHHHHHHHHHH
Confidence 36666667999999999988888887765
No 443
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=52.52 E-value=21 Score=26.14 Aligned_cols=33 Identities=18% Similarity=0.083 Sum_probs=19.5
Q ss_pred CceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018240 135 PTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 135 ~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
.++.+++++. |...+ +.+.++|++++++|+.=.
T Consensus 80 ~~~P~iIvt~------~~~~p----~~l~e~a~~~~ipll~t~ 112 (127)
T PF02603_consen 80 YNPPCIIVTR------GLEPP----PELIELAEKYNIPLLRTP 112 (127)
T ss_dssp TT-S-EEEET------TT-------HHHHHHHHHCT--EEEES
T ss_pred CCCCEEEEEC------cCCCC----HHHHHHHHHhCCcEEEcC
Confidence 5777888833 23333 889999999999987654
No 444
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=51.71 E-value=30 Score=28.55 Aligned_cols=60 Identities=18% Similarity=0.169 Sum_probs=35.1
Q ss_pred CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce-ecCh-----hhHHHHHHHHHHcCcEEEEe
Q 018240 114 GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSV-----EYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 114 ~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~-----~~l~~i~~~~~~~~~~li~D 176 (359)
..+++++|.+.+++.... .++++|++++...-..+. ..+. +.++.+.++|+++|+.+++=
T Consensus 104 ~~~~~~~l~~~i~~~~~~---~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~~ 169 (242)
T cd00984 104 SSLTVSDIRSRARRLKKE---HGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIAL 169 (242)
T ss_pred CCCCHHHHHHHHHHHHHh---cCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEe
Confidence 345777777776642111 367788887765422221 0111 22566778888898877763
No 445
>cd00308 enolase_like Enolase-superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. Enolase superfamily contains different enzymes, like enolases, glutarate-, fucanate- and galactonate dehydratases, o-succinylbenzoate synthase, N-acylamino acid racemase, L-alanine-DL-glutamate epimerase, mandelate racemase, muconate lactonizing enzyme and 3-methylaspartase.
Probab=51.02 E-value=47 Score=27.21 Aligned_cols=82 Identities=13% Similarity=0.131 Sum_probs=50.1
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcC
Q 018240 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALG 188 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~ 188 (359)
..+.|+..+.++..+.++.. .+..+.++|-|.. .++++.+.++.+..+++|..||.. ....
T Consensus 98 ~lDaN~~~~~~~a~~~~~~l------~~~~i~~iEeP~~--------~~d~~~~~~L~~~~~~pIa~dEs~--~~~~--- 158 (229)
T cd00308 98 AVDANGAWTPKEAIRLIRAL------EKYGLAWIEEPCA--------PDDLEGYAALRRRTGIPIAADESV--TTVD--- 158 (229)
T ss_pred EEECCCCCCHHHHHHHHHHh------hhcCCCeEECCCC--------ccCHHHHHHHHhhCCCCEEeCCCC--CCHH---
Confidence 33445556777766666543 2344678876553 345788888888899999999962 1111
Q ss_pred chhHhh--hcCccEEEEeccccCC
Q 018240 189 VPVRRL--VQAADSASVCLSKGLG 210 (359)
Q Consensus 189 ~~~~~~--~~~~d~~~~s~~K~~g 210 (359)
....+ ...+|++..-.+|.-|
T Consensus 159 -~~~~~~~~~~~d~~~~k~~~~GG 181 (229)
T cd00308 159 -DALEALELGAVDILQIKPTRVGG 181 (229)
T ss_pred -HHHHHHHcCCCCEEecCccccCC
Confidence 11112 2357788777777433
No 446
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=50.94 E-value=15 Score=23.31 Aligned_cols=21 Identities=48% Similarity=0.612 Sum_probs=18.4
Q ss_pred CCceecChhhHHHHHHHHHHcC
Q 018240 149 CGGRCLSVEYTDSVGEIAKKHG 170 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~ 170 (359)
|.|.+ +.+.++.|++++++||
T Consensus 17 ~~G~i-~~~~l~~la~ia~~yg 37 (69)
T PF03460_consen 17 PGGRI-SAEQLRALAEIAEKYG 37 (69)
T ss_dssp GGGEE-EHHHHHHHHHHHHHHS
T ss_pred CCEEE-CHHHHHHHHHHHHHhC
Confidence 55787 7789999999999998
No 447
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=50.65 E-value=34 Score=32.42 Aligned_cols=58 Identities=17% Similarity=0.083 Sum_probs=39.5
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce-ec-------------ChhhHHHHHHHHHHcCcEEEEecc
Q 018240 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR-CL-------------SVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~-------------~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
|+..+.+.++-..+ -++.+|++.+...+|... -| +.++++++++.|+++|+.||.|-+
T Consensus 25 ~~~gi~~~l~yl~~----lG~~~i~l~Pi~~~~~~~~gY~~~d~~~id~~~Gt~~~~~~lv~~ah~~gi~vilD~v 96 (543)
T TIGR02403 25 DLRGIIEKLDYLKK----LGVDYIWLNPFYVSPQKDNGYDVSDYYAINPLFGTMADFEELVSEAKKRNIKIMLDMV 96 (543)
T ss_pred CHHHHHHhHHHHHH----cCCCEEEECCcccCCCCCCCCCccccCccCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 66666665542211 467788887766544311 11 347899999999999999999965
No 448
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=50.36 E-value=53 Score=23.21 Aligned_cols=51 Identities=14% Similarity=0.204 Sum_probs=37.1
Q ss_pred CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEe
Q 018240 112 QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 112 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
....++++++++.++ .++..|++ .+.. +|++-- .++..+++++.++-+++-
T Consensus 45 TSHkl~~eEle~~le--------e~~E~ivv-GTG~--~G~l~l---~~ea~e~~r~k~~~vi~~ 95 (121)
T COG1504 45 TSHKLALEELEELLE--------EGPEVIVV-GTGQ--SGMLEL---SEEAREFFRKKGCEVIEL 95 (121)
T ss_pred cccccCHHHHHHHHh--------cCCcEEEE-ecCc--eeEEEe---CHHHHHHHHhcCCeEEEe
Confidence 345689999999999 67778877 4443 366433 578888999998776664
No 449
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=49.95 E-value=19 Score=30.83 Aligned_cols=29 Identities=7% Similarity=-0.044 Sum_probs=23.0
Q ss_pred hhHHHHHHHHH-HcCcEEEEecccccchhh
Q 018240 157 EYTDSVGEIAK-KHGLKLHIDGARIFNAAV 185 (359)
Q Consensus 157 ~~l~~i~~~~~-~~~~~li~D~a~~~~~~~ 185 (359)
..++.|.+||. .++..||.||+|......
T Consensus 159 sRl~ql~~W~g~dfdgvivfDEcH~akn~~ 188 (303)
T PF13872_consen 159 SRLDQLVDWCGEDFDGVIVFDECHKAKNLS 188 (303)
T ss_pred chHHHHHHHHhcCCCceEEeccchhcCCCC
Confidence 46899999994 468899999999765543
No 450
>cd04917 ACT_AKiii-LysC-EC_2 ACT domains located C-terminal to the catalytic domain of the lysine-sensitive aspartokinase isoenzyme AKIII. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the lysine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in bacteria (Escherichia coli (EC) LysC). Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The E. coli AKIII (LysC) binds two feedback allosteric inhibitor lysine molecules at the dimer interface located between the ACT1 domain of two subunits. The second ACT domain (ACT2), this CD, is not involved in the binding of heterotrophic effectors. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=49.74 E-value=54 Score=20.25 Aligned_cols=45 Identities=9% Similarity=0.141 Sum_probs=32.1
Q ss_pred HHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 304 AACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 304 ~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
..++.+.|.+.++.....+....++++ ..++++.+.++..|.+.+
T Consensus 18 ~~~i~~~L~~i~i~~i~~~~s~~~is~--~V~~~~~~~a~~~Lh~~f 62 (64)
T cd04917 18 EKRIFDALEDINVRMICYGASNHNLCF--LVKEEDKDEVVQRLHSRL 62 (64)
T ss_pred HHHHHHHHHhCCeEEEEEecCccEEEE--EEeHHHHHHHHHHHHHHH
Confidence 346677776677776666666667776 578889999988886644
No 451
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=49.64 E-value=81 Score=26.82 Aligned_cols=41 Identities=5% Similarity=0.029 Sum_probs=25.6
Q ss_pred cccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEecc
Q 018240 98 STIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENT 145 (359)
Q Consensus 98 ~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~ 145 (359)
.+..|.++..++.+.++.-|.+++.+.+++ .++.+|++++.
T Consensus 49 i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~-------~~~d~vV~D~y 89 (279)
T TIGR03590 49 LLSAGFPVYELPDESSRYDDALELINLLEE-------EKFDILIVDHY 89 (279)
T ss_pred HHHcCCeEEEecCCCchhhhHHHHHHHHHh-------cCCCEEEEcCC
Confidence 344555555554333334477788888885 46778888663
No 452
>PRK13601 putative L7Ae-like ribosomal protein; Provisional
Probab=49.48 E-value=77 Score=21.17 Aligned_cols=44 Identities=11% Similarity=0.136 Sum_probs=30.5
Q ss_pred HHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018240 119 DLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 119 ~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
++..+.+++ .+.++|++..-.. .+-.+.+.++|+.++++++...
T Consensus 14 ~~vlkaIk~-------gkakLViiA~Da~--------~~~~k~i~~~c~~~~Vpv~~~~ 57 (82)
T PRK13601 14 KQTLKAITN-------CNVLQVYIAKDAE--------EHVTKKIKELCEEKSIKIVYID 57 (82)
T ss_pred HHHHHHHHc-------CCeeEEEEeCCCC--------HHHHHHHHHHHHhCCCCEEEeC
Confidence 455556664 6788888833222 2347899999999999996554
No 453
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=49.36 E-value=34 Score=29.83 Aligned_cols=74 Identities=15% Similarity=0.232 Sum_probs=47.0
Q ss_pred CCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHH
Q 018240 85 DNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGE 164 (359)
Q Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~ 164 (359)
++..++.|+ ..++-..++++++..... .-.+.+--++. +-|.|+++-|.. .+.++.++|.+
T Consensus 57 ~~k~y~syE--eLakd~~vDvVyi~~~~~--qH~evv~l~l~---------~~K~VL~EKPla------~n~~e~~~ive 117 (351)
T KOG2741|consen 57 NPKAYGSYE--ELAKDPEVDVVYISTPNP--QHYEVVMLALN---------KGKHVLCEKPLA------MNVAEAEEIVE 117 (351)
T ss_pred CCccccCHH--HHhcCCCcCEEEeCCCCc--cHHHHHHHHHH---------cCCcEEeccccc------CCHHHHHHHHH
Confidence 555566677 457777778888854311 12333333444 223477766443 34678999999
Q ss_pred HHHHcCcEEEEecc
Q 018240 165 IAKKHGLKLHIDGA 178 (359)
Q Consensus 165 ~~~~~~~~li~D~a 178 (359)
.|+++| +.+.|+.
T Consensus 118 aA~~rg-v~~meg~ 130 (351)
T KOG2741|consen 118 AAEARG-VFFMEGL 130 (351)
T ss_pred HHHHcC-cEEEeee
Confidence 999999 6777775
No 454
>cd04923 ACT_AK-LysC-DapG-like_2 ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related domains. This CD includes the C-terminal of the two ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, as well as, the second and fourth, of four, ACT domains present in cyanobacteria AK. Also included are the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase isoenzyme AKI found in Bacilli (B. subtilis strain 168), Clostridia, and Actinobacteria bacterial species. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=49.24 E-value=41 Score=20.34 Aligned_cols=45 Identities=20% Similarity=0.388 Sum_probs=30.6
Q ss_pred HHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 304 AACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 304 ~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
..++.+.|.+.||.+..-+....++++ ..+.++.++++++|.+.+
T Consensus 17 ~~~i~~~L~~~~i~v~~i~~s~~~is~--~v~~~~~~~~~~~l~~~l 61 (63)
T cd04923 17 AAKMFKALAEAGINIEMISTSEIKISC--LVDEDDAEKAVRALHEAF 61 (63)
T ss_pred HHHHHHHHHHCCCCEEEEEccCCeEEE--EEeHHHHHHHHHHHHHHh
Confidence 456888888888877333222345555 567888888888887654
No 455
>cd04922 ACT_AKi-HSDH-ThrA_2 ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). This CD includes the second of two ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). The ACT domains are positioned between the N-terminal catalytic domain of AK and the C-terminal HSDH domain found in bacteria (Escherichia coli (EC) ThrA) and higher plants (Zea mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. HSDH is the first committed reaction in the branch of the pathway that leads to Thr and Met. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathwa
Probab=49.19 E-value=58 Score=19.98 Aligned_cols=46 Identities=20% Similarity=0.315 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhcCcee--ccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 303 YAACLLKKLEEHGVLV--MPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~--~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
-..++.+.|.+.||.+ ...+....++++ ..++++.++.+++|.+.+
T Consensus 17 ~~~~i~~~l~~~~I~v~~i~~~~s~~~is~--~v~~~~~~~~~~~lh~~~ 64 (66)
T cd04922 17 VAATFFSALAKANVNIRAIAQGSSERNISA--VIDEDDATKALRAVHERF 64 (66)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCcccEEEE--EEeHHHHHHHHHHHHHHH
Confidence 4557888899999877 222223366766 577888888888877654
No 456
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=47.79 E-value=47 Score=27.10 Aligned_cols=55 Identities=13% Similarity=0.115 Sum_probs=33.2
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEE
Q 018240 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 175 (359)
...+++.+.|++..+. +++++|++. . +.|+|.....+++....+..++.+.++|.
T Consensus 29 ~~~~~l~~~l~~a~~d---~~ik~vvL~-~-~s~gg~~~~~~el~~~i~~~~~~~kpVia 83 (222)
T cd07018 29 LSLRDLLEALEKAAED---DRIKGIVLD-L-DGLSGGLAKLEELRQALERFRASGKPVIA 83 (222)
T ss_pred ccHHHHHHHHHHHhcC---CCeEEEEEE-C-CCCCCCHHHHHHHHHHHHHHHHhCCeEEE
Confidence 4667777777653322 678999983 3 33777655555555555444555666654
No 457
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=47.45 E-value=19 Score=24.09 Aligned_cols=20 Identities=40% Similarity=0.564 Sum_probs=18.0
Q ss_pred HHHHHHHHHHcCcEEEEecc
Q 018240 159 TDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a 178 (359)
-.+|+++++++|++++.|..
T Consensus 29 A~~I~~~A~e~~VPi~~~~~ 48 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPD 48 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 58899999999999999964
No 458
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=47.05 E-value=1.8e+02 Score=24.62 Aligned_cols=86 Identities=13% Similarity=0.023 Sum_probs=47.2
Q ss_pred CeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecCh-h
Q 018240 79 SEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSV-E 157 (359)
Q Consensus 79 ~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~-~ 157 (359)
+.|++++..+.........++..|+.++.+-.+. .+.+.++...+ .....||+.+... .||.--.. +
T Consensus 121 dgviipDLP~ee~~~~~~~~~~~gi~~I~lv~Pt---T~~eri~~i~~--------~a~gFIY~vS~~G-vTG~~~~~~~ 188 (263)
T CHL00200 121 KGLIIPDLPYEESDYLISVCNLYNIELILLIAPT---SSKSRIQKIAR--------AAPGCIYLVSTTG-VTGLKTELDK 188 (263)
T ss_pred eEEEecCCCHHHHHHHHHHHHHcCCCEEEEECCC---CCHHHHHHHHH--------hCCCcEEEEcCCC-CCCCCccccH
Confidence 5677777654222110122556777777762221 14566666665 3334677755444 67764222 5
Q ss_pred hHHHHHHHHHHc-CcEEEEe
Q 018240 158 YTDSVGEIAKKH-GLKLHID 176 (359)
Q Consensus 158 ~l~~i~~~~~~~-~~~li~D 176 (359)
.+.++.+..+++ +.++.+|
T Consensus 189 ~~~~~i~~ir~~t~~Pi~vG 208 (263)
T CHL00200 189 KLKKLIETIKKMTNKPIILG 208 (263)
T ss_pred HHHHHHHHHHHhcCCCEEEE
Confidence 567777777665 7777765
No 459
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=46.93 E-value=55 Score=27.21 Aligned_cols=36 Identities=19% Similarity=0.190 Sum_probs=26.2
Q ss_pred CceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecc
Q 018240 135 PTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 135 ~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
-.+.+|.+ |.+.+.+.++.+.++.+++++++|+|=+
T Consensus 59 ~~~~aiki--------G~l~~~~~v~~i~~~l~~~~~~vV~DPV 94 (246)
T PF08543_consen 59 MKFDAIKI--------GYLGSAEQVEIIADFLKKPKIPVVLDPV 94 (246)
T ss_dssp SC-SEEEE---------S-SSHHHHHHHHHHHHHTTTEEEEE--
T ss_pred ccccEEEE--------cccCCchhhhhHHHHHhccCCCEEEecc
Confidence 35666665 7888889999999999888999999975
No 460
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=46.73 E-value=44 Score=28.97 Aligned_cols=58 Identities=12% Similarity=0.046 Sum_probs=39.3
Q ss_pred CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEEe
Q 018240 113 DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHID 176 (359)
Q Consensus 113 ~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~D 176 (359)
+|.+|.+.+++.++...+ .++..|++..+. .-+..++.+|..++.+.+.+. .+.+|+=
T Consensus 23 ~g~iD~~~l~~lv~~li~----~Gv~Gi~v~Gst--GE~~~Lt~eEr~~v~~~~~~~~~grvpvi~G 83 (309)
T cd00952 23 TDTVDLDETARLVERLIA----AGVDGILTMGTF--GECATLTWEEKQAFVATVVETVAGRVPVFVG 83 (309)
T ss_pred CCCcCHHHHHHHHHHHHH----cCCCEEEECccc--ccchhCCHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 488999998888875322 456677773333 235678889999999877654 3555543
No 461
>cd04936 ACT_AKii-LysC-BS-like_2 ACT domains of the lysine-sensitive, aspartokinase (AK) isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related domains. This CD includes the C-terminal of the two ACT domains of the lysine-sensitive, aspartokinase (AK) isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis strain 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive AK isoenzymes. The B. subtilis strain 168 AKII is induced by methionine and repressed and inhibited by lysine. Although C. glutamicum is known to contain a single AK, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In corynebacteria and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regu
Probab=46.70 E-value=50 Score=19.96 Aligned_cols=45 Identities=20% Similarity=0.380 Sum_probs=30.3
Q ss_pred HHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 304 AACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 304 ~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
..++.+.|.+.||.+..-.....++++ ..++++.+.+++.|.+.+
T Consensus 17 ~~~i~~~L~~~~i~v~~i~~s~~~is~--~v~~~d~~~~~~~l~~~~ 61 (63)
T cd04936 17 AAKMFEALAEAGINIEMISTSEIKISC--LIDEDDAEKAVRALHEAF 61 (63)
T ss_pred HHHHHHHHHHCCCcEEEEEccCceEEE--EEeHHHHHHHHHHHHHHh
Confidence 446888888999877332222345665 567888888888877654
No 462
>PF01248 Ribosomal_L7Ae: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; InterPro: IPR004038 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, ribosomal protein L30 from eukaryotes and archaebacteria, Gadd45 and MyD118 [].; PDB: 2CZW_A 3V7E_B 2QEX_F 1YJ9_F 1VQ8_F 1YJN_F 3I56_F 1VQ6_F 2OTJ_F 1YIJ_F ....
Probab=46.48 E-value=89 Score=21.25 Aligned_cols=45 Identities=9% Similarity=0.178 Sum_probs=30.7
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHH-HHHHHHHcCcEEEEec
Q 018240 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDS-VGEIAKKHGLKLHIDG 177 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~-i~~~~~~~~~~li~D~ 177 (359)
..+..+.++. .+.++|++....+ | ..+.. +..+|++++++++.=.
T Consensus 20 ~~~v~k~l~~-------~~~~lvilA~d~~-~-------~~~~~~l~~~c~~~~Ip~~~~~ 65 (95)
T PF01248_consen 20 IKEVLKALKK-------GKAKLVILAEDCS-P-------DSIKKHLPALCEEKNIPYVFVP 65 (95)
T ss_dssp HHHHHHHHHT-------TCESEEEEETTSS-S-------GHHHHHHHHHHHHTTEEEEEES
T ss_pred hHHHHHHHHc-------CCCcEEEEcCCCC-h-------hhhcccchhheeccceeEEEEC
Confidence 4566777775 6778888843332 2 23555 8889999999987654
No 463
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=46.48 E-value=1.4e+02 Score=25.16 Aligned_cols=89 Identities=13% Similarity=0.032 Sum_probs=48.2
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEec-cccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhh
Q 018240 117 DIDLIEAAIRDPKGEIVYPTTRLICLEN-THANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRL 194 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~-~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~ 194 (359)
++++++.+++...+. .+..+++++. +... .+.....-++..|..+.+.++.+|++|..|+.|.... ........
T Consensus 144 t~~e~~~Ave~i~~~---Gn~~i~l~~rG~s~y-~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G~r~~~~~~~~aAv 219 (260)
T TIGR01361 144 TIEEWLYAAEYILSS---GNGNVILCERGIRTF-EKATRNTLDLSAVPVLKKETHLPIIVDPSHAAGRRDLVIPLAKAAI 219 (260)
T ss_pred CHHHHHHHHHHHHHc---CCCcEEEEECCCCCC-CCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCCccchHHHHHHHHH
Confidence 677777666643221 2234555533 2221 1222223468888888888899999999887652211 11122333
Q ss_pred hcCccEEEE----eccccC
Q 018240 195 VQAADSASV----CLSKGL 209 (359)
Q Consensus 195 ~~~~d~~~~----s~~K~~ 209 (359)
..++|-+++ ++.|.+
T Consensus 220 a~Ga~gl~iE~H~t~d~a~ 238 (260)
T TIGR01361 220 AAGADGLMIEVHPDPEKAL 238 (260)
T ss_pred HcCCCEEEEEeCCCccccC
Confidence 457784333 555554
No 464
>PLN02476 O-methyltransferase
Probab=46.27 E-value=1.5e+02 Score=25.21 Aligned_cols=127 Identities=11% Similarity=0.164 Sum_probs=63.1
Q ss_pred CCChHHHHHHHHHHHHhCCCCe--EEcCCchHHHHHHHHHhhhhcCCeEEecCCCc--ceeeccccccccCCcc-ceeee
Q 018240 35 MHDPTAFRLETEMAKVMGKEAG--LFVPSGTMGNLISVLVHCETRGSEVILGDNSH--IHIYENGGISTIGGVH-PRTVK 109 (359)
Q Consensus 35 ~~~~~~~~l~~~la~~~~~~~~--~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~--~~~~~~~~~~~~~g~~-~~~v~ 109 (359)
..++...++...+++..+.... +-+..|..++.++. .+. ++.+|+.-+..- ..... ...+..|.. -+.+.
T Consensus 101 ~v~~~~g~lL~~L~~~~~ak~VLEIGT~tGySal~lA~--al~-~~G~V~TiE~d~e~~~~Ar--~n~~~aGl~~~I~li 175 (278)
T PLN02476 101 QVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAVAL--VLP-ESGCLVACERDSNSLEVAK--RYYELAGVSHKVNVK 175 (278)
T ss_pred ccCHHHHHHHHHHHHhcCCCeEEEecCCCCHHHHHHHH--hCC-CCCEEEEEECCHHHHHHHH--HHHHHcCCCCcEEEE
Confidence 3456667777777777777665 44555655554432 232 344555444331 11111 123344543 22332
Q ss_pred cCCCCCCCHH-HHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccc
Q 018240 110 NNQDGTMDID-LIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFN 182 (359)
Q Consensus 110 ~~~~~~~~~~-~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~ 182 (359)
.. |.. .|.+...+. . ...-.+|+++..-. .. .+.++.+.++.+. |..||+|++...|
T Consensus 176 ~G-----dA~e~L~~l~~~~-~---~~~FD~VFIDa~K~----~Y--~~y~e~~l~lL~~-GGvIV~DNvL~~G 233 (278)
T PLN02476 176 HG-----LAAESLKSMIQNG-E---GSSYDFAFVDADKR----MY--QDYFELLLQLVRV-GGVIVMDNVLWHG 233 (278)
T ss_pred Ec-----CHHHHHHHHHhcc-c---CCCCCEEEECCCHH----HH--HHHHHHHHHhcCC-CcEEEEecCccCC
Confidence 22 433 343332210 0 03567899966432 21 2345666665544 6678999985333
No 465
>PRK12313 glycogen branching enzyme; Provisional
Probab=46.15 E-value=45 Score=32.32 Aligned_cols=45 Identities=11% Similarity=-0.029 Sum_probs=33.3
Q ss_pred CceeEEEEeccccCCC----c-----------eecChhhHHHHHHHHHHcCcEEEEeccc
Q 018240 135 PTTRLICLENTHANCG----G-----------RCLSVEYTDSVGEIAKKHGLKLHIDGAR 179 (359)
Q Consensus 135 ~~~~~v~i~~~~~~pt----G-----------~~~~~~~l~~i~~~~~~~~~~li~D~a~ 179 (359)
-+..+|++.+....|. | ..-+.++++++++.|+++|+-||.|-++
T Consensus 183 LGv~~i~L~Pi~~~~~~~~~GY~~~~y~~i~~~~Gt~~d~k~lv~~~H~~Gi~VilD~V~ 242 (633)
T PRK12313 183 MGYTHVEFMPLMEHPLDGSWGYQLTGYFAPTSRYGTPEDFMYLVDALHQNGIGVILDWVP 242 (633)
T ss_pred cCCCEEEeCchhcCCCCCCCCCCCcCcCcCCCCCCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 4677888877654442 1 1223578999999999999999999764
No 466
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=45.77 E-value=60 Score=28.70 Aligned_cols=51 Identities=22% Similarity=0.282 Sum_probs=35.4
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee--cChhhHHHHHHHHHHcCcEEEE
Q 018240 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC--LSVEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~--~~~~~l~~i~~~~~~~~~~li~ 175 (359)
+++.+..+++ ....+|++--..-+-.+.. ++.+++++.+++|+++|..+.+
T Consensus 15 ~l~~l~~ai~--------~GADaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~gkk~~V 67 (347)
T COG0826 15 NLEDLKAAIA--------AGADAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSAGKKVYV 67 (347)
T ss_pred CHHHHHHHHH--------cCCCEEEeCCcccccccccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 7888888888 4577888843312233334 7788899999999999884443
No 467
>PRK12412 pyridoxal kinase; Reviewed
Probab=45.34 E-value=48 Score=27.99 Aligned_cols=28 Identities=36% Similarity=0.434 Sum_probs=24.2
Q ss_pred ceecChhhHHHHHHHHHHcCcE-EEEecc
Q 018240 151 GRCLSVEYTDSVGEIAKKHGLK-LHIDGA 178 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~-li~D~a 178 (359)
|++.+.+.++.+.+++++++.. +++|-+
T Consensus 79 G~l~~~~~v~~i~~~~~~~~~~~vv~DPv 107 (268)
T PRK12412 79 GMLGSVEIIEMVAETIEKHNFKNVVVDPV 107 (268)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCEEECcC
Confidence 7888888899999999999876 889965
No 468
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=45.32 E-value=99 Score=25.90 Aligned_cols=49 Identities=18% Similarity=0.286 Sum_probs=33.9
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecc
Q 018240 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
..+.+++.+. +..++++ .|.- |. ..-...+++|.+.+++.++++|+|+-
T Consensus 91 av~~i~k~L~---------RlhavVI-GPGL---GRdp~~~k~i~~iley~~~~dvP~VIDaD 140 (306)
T KOG3974|consen 91 AVDIIEKLLQ---------RLHAVVI-GPGL---GRDPAILKEIAKILEYLRGKDVPLVIDAD 140 (306)
T ss_pred hHhHHHHHHh---------heeEEEE-CCCC---CCCHHHHHHHHHHHHHHhcCCCcEEEcCC
Confidence 4556666565 4556777 4332 44 22236789999999999999999983
No 469
>PRK01018 50S ribosomal protein L30e; Reviewed
Probab=45.22 E-value=86 Score=21.79 Aligned_cols=43 Identities=14% Similarity=0.145 Sum_probs=29.6
Q ss_pred HHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEe
Q 018240 119 DLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 119 ~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
++..+.+++ .+.++|++..-. |.+-...+..+|++++++++.-
T Consensus 22 ~~v~kai~~-------gkaklViiA~D~--------~~~~~~~i~~~c~~~~Ip~~~~ 64 (99)
T PRK01018 22 KRTIKAIKL-------GKAKLVIVASNC--------PKDIKEDIEYYAKLSGIPVYEY 64 (99)
T ss_pred HHHHHHHHc-------CCceEEEEeCCC--------CHHHHHHHHHHHHHcCCCEEEE
Confidence 455566664 678888883321 2345789999999999997553
No 470
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=44.63 E-value=23 Score=30.32 Aligned_cols=23 Identities=26% Similarity=0.358 Sum_probs=21.3
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018240 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++++++++.|+++|+.||+|-+
T Consensus 51 ~~d~~~Lv~~~h~~gi~VilD~V 73 (316)
T PF00128_consen 51 MEDFKELVDAAHKRGIKVILDVV 73 (316)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred hhhhhhhhhccccccceEEEeee
Confidence 57899999999999999999976
No 471
>cd03320 OSBS o-Succinylbenzoate synthase (OSBS) catalyzes the conversion of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) to 4-(2'-carboxyphenyl)-4-oxobutyrate (o-succinylbenzoate or OSB), a reaction in the menaquinone biosynthetic pathway. Menaquinone is an essential cofactor for anaerobic growth in eubacteria and some archaea. OSBS belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=44.58 E-value=93 Score=26.16 Aligned_cols=80 Identities=13% Similarity=0.099 Sum_probs=48.4
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcC
Q 018240 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALG 188 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~ 188 (359)
..+.|+..+.++..+.++.. ....+.++|-|.. .++++.+.++. .+++|..||.. ...
T Consensus 131 ~vDaN~~w~~~~A~~~~~~l------~~~~i~~iEqP~~--------~~d~~~~~~l~--~~~PIa~dEs~--~~~---- 188 (263)
T cd03320 131 RLDANGGWSLEEALAFLEAL------AAGRIEYIEQPLP--------PDDLAELRRLA--AGVPIALDESL--RRL---- 188 (263)
T ss_pred EEeCCCCCCHHHHHHHHHhh------cccCCceEECCCC--------hHHHHHHHHhh--cCCCeeeCCcc--ccc----
Confidence 34455666777766666643 2344667876553 34577777776 78999999962 111
Q ss_pred chhHhhh--cCccEEEEeccccCC
Q 018240 189 VPVRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 189 ~~~~~~~--~~~d~~~~s~~K~~g 210 (359)
.....+. ..+|++..-.+|+-|
T Consensus 189 ~~~~~~~~~~~~d~v~~k~~~~GG 212 (263)
T cd03320 189 DDPLALAAAGALGALVLKPALLGG 212 (263)
T ss_pred cCHHHHHhcCCCCEEEECchhcCC
Confidence 1222222 267888888888533
No 472
>PF06877 RraB: Regulator of ribonuclease activity B; InterPro: IPR009671 This entry occurs in several hypothetical bacterial proteins of around 120 residues in length. The function of these proteins is unknown. The protein structure has been determined for one member of this group, the hypothetical protein VCO424 from Vibrio cholerae; it has an alpha+beta sandwich fold.; PDB: 1NXI_A.
Probab=44.50 E-value=1e+02 Score=21.46 Aligned_cols=62 Identities=13% Similarity=0.133 Sum_probs=38.9
Q ss_pred EEEEeccchHHHHHHHHHHHHhcCceecc------CCC--cEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018240 292 VYFEITEDSKLYAACLLKKLEEHGVLVMP------ESS--TRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~l~~~gi~~~~------~~~--~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
.++.++. ..+...+...+.+.|..+.. .+. ..++++....++.+.|......|.++.+++..
T Consensus 28 h~~~f~~--~~~~~~f~~~~~~~g~~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~I~~~~~~l~~lA~~~~g 97 (104)
T PF06877_consen 28 HWFYFED--EEDAEKFAEELEKLGYEVESAEEDEEDGDGPYCLDISREMVLDYEDINAITQELEDLAKEFGG 97 (104)
T ss_dssp EEEEES---HHHHHHHHHHHHHHS---B----B-SS-SSBEEEEEEEEE-S-HHHHHHHHHHHHHHHHHHT-
T ss_pred EEEEeCC--HHHHHHHHHHHHHCCCEEEEeecccCCCCceEEEEEEEecCCCHHHHHHHHHHHHHHHHHhCc
Confidence 4555554 35889999999998887632 122 34666654467788999999999888887754
No 473
>cd05560 Xcc1710_like Xcc1710_like family, specific to proteobacteria. Xcc1710 is a hypothetical protein from Xanthomonas campestris pv. campestris str. ATCC 33913, similar to Mth938, a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. Their three-dimensional structures have been determined, but their functions are unknown.
Probab=43.78 E-value=1e+02 Score=21.82 Aligned_cols=49 Identities=14% Similarity=0.133 Sum_probs=35.9
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecc
Q 018240 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++.++|+..+. .++.++++ .+.. ++...+ .++.+.++++|+-+-+-+.
T Consensus 39 ~l~~e~l~~l~~--------~~peilii-GTG~--~~~~~~----~~~~~~l~~~gi~vE~m~T 87 (109)
T cd05560 39 DLTAAHFEALLA--------LQPEVILL-GTGE--RQRFPP----PALLAPLLARGIGVEVMDT 87 (109)
T ss_pred cCCHHHHHHHHh--------cCCCEEEE-ecCC--CCCcCC----HHHHHHHHHcCCeEEEECH
Confidence 468999998888 45677777 5554 355555 7777888889998887765
No 474
>COG0157 NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism]
Probab=43.46 E-value=1.1e+02 Score=25.86 Aligned_cols=70 Identities=19% Similarity=0.204 Sum_probs=42.7
Q ss_pred eeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhh
Q 018240 106 RTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAV 185 (359)
Q Consensus 106 ~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~ 185 (359)
+.|..+ ++++++++++ .++.+|+++|- +.+++++.+++....+ .++.-.+ .|..
T Consensus 191 IEVEve-----sle~~~eAl~--------agaDiImLDNm---------~~e~~~~av~~l~~~~-~~~lEaS--GgIt- 244 (280)
T COG0157 191 IEVEVE-----SLEEAEEALE--------AGADIIMLDNM---------SPEELKEAVKLLGLAG-RALLEAS--GGIT- 244 (280)
T ss_pred EEEEcC-----CHHHHHHHHH--------cCCCEEEecCC---------CHHHHHHHHHHhccCC-ceEEEEe--CCCC-
Confidence 455555 8999999999 67889999662 2567888888864444 3333332 2111
Q ss_pred hcCchhHhhh-cCccEEEE
Q 018240 186 ALGVPVRRLV-QAADSASV 203 (359)
Q Consensus 186 ~~~~~~~~~~-~~~d~~~~ 203 (359)
..+...+. .++|+++.
T Consensus 245 --~~ni~~yA~tGVD~IS~ 261 (280)
T COG0157 245 --LENIREYAETGVDVISV 261 (280)
T ss_pred --HHHHHHHhhcCCCEEEe
Confidence 12233332 36887776
No 475
>PRK06683 hypothetical protein; Provisional
Probab=43.40 E-value=98 Score=20.64 Aligned_cols=44 Identities=11% Similarity=0.146 Sum_probs=30.4
Q ss_pred HHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018240 119 DLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 119 ~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
++..+.+++ .+.++|++-.-.. ..-.+.+.++|+.++++++.-+
T Consensus 17 ~~v~kaik~-------gkaklViiA~Da~--------~~~~~~i~~~~~~~~Vpv~~~~ 60 (82)
T PRK06683 17 KRTLEAIKN-------GIVKEVVIAEDAD--------MRLTHVIIRTALQHNIPITKVE 60 (82)
T ss_pred HHHHHHHHc-------CCeeEEEEECCCC--------HHHHHHHHHHHHhcCCCEEEEC
Confidence 455556664 6788888833222 2237889999999999987655
No 476
>PRK10927 essential cell division protein FtsN; Provisional
Probab=43.14 E-value=99 Score=26.64 Aligned_cols=47 Identities=15% Similarity=0.122 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhcCcee-ccCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018240 302 LYAACLLKKLEEHGVLV-MPESSTRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 302 ~~~~~~~~~l~~~gi~~-~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
.+++.+...|...|+-. +..+..+.|+-+.++.+.++.+.+.+.|+.
T Consensus 259 ~nAE~LrAkLa~~G~~A~I~~~g~~~RVrVGPf~sr~eAe~a~~rLk~ 306 (319)
T PRK10927 259 EQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKM 306 (319)
T ss_pred HHHHHHHHHHHHcCCeeEEccCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 48899999999899865 223345888888889999999999998875
No 477
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=43.09 E-value=58 Score=27.72 Aligned_cols=78 Identities=14% Similarity=0.190 Sum_probs=43.2
Q ss_pred cCCeEEecCCCcceeeccccccccCCccceee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecC
Q 018240 77 RGSEVILGDNSHIHIYENGGISTIGGVHPRTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLS 155 (359)
Q Consensus 77 ~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~ 155 (359)
++..+++..+.+. |. ++.+|++.+.+ ....+..+...+|.+.++...+ .++++|+.++..++
T Consensus 170 ~~~~~v~~H~af~--Y~----~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~----~~v~~if~e~~~~~------- 232 (282)
T cd01017 170 KGKTFVTQHAAFG--YL----ARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKK----SDVKYIFFEENASS------- 232 (282)
T ss_pred CCCeEEEecccHH--HH----HHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHH----cCCCEEEEeCCCCh-------
Confidence 3455777776633 21 56677777654 2333444555555544432111 57888888664441
Q ss_pred hhhHHHHHHHHHHcCcEEEE
Q 018240 156 VEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~ 175 (359)
+.+..++++.|+.++.
T Consensus 233 ----~~~~~la~~~g~~v~~ 248 (282)
T cd01017 233 ----KIAETLAKETGAKLLV 248 (282)
T ss_pred ----HHHHHHHHHcCCcEEE
Confidence 3344467778876643
No 478
>PF13840 ACT_7: ACT domain ; PDB: 3S1T_A 1ZHV_A 3AB4_K 3AB2_O 2DTJ_A 3AAW_A 2RE1_B 3MAH_A 1ZVP_D.
Probab=42.96 E-value=28 Score=21.89 Aligned_cols=43 Identities=19% Similarity=0.361 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018240 303 YAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
-...+...|.++||-+..-. ....+++ ...++++++++++|.+
T Consensus 23 v~a~i~~~La~~~I~i~~is-S~~~~~i--lV~~~~~~~A~~~L~~ 65 (65)
T PF13840_consen 23 VAAKIFSALAEAGINIFMIS-SEISISI--LVKEEDLEKAVEALHE 65 (65)
T ss_dssp HHHHHHHHHHHTTS-ECEEE-ESSEEEE--EEEGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEE-EeeeEEE--EEeHHHHHHHHHHhcC
Confidence 34578888999999774333 3335554 4678999999998864
No 479
>PF05036 SPOR: Sporulation related domain; InterPro: IPR007730 This 70 residue domain is composed of two 35 residue repeats that are found in bacterial proteins involved in sporulation and cell division, such as FtsN, CwlM and RlpA. This repeat might be involved in binding peptidoglycan. FtsN is an essential cell division protein with a simple bitopic topology: a short N-terminal cytoplasmic segment fused to a large carboxy periplasmic domain through a single transmembrane domain. The repeats lie at the periplasmic C terminus, which has an RNP-like fold []. FtsN localises to the septum ring complex. The CwlM protein is a cell wall hydrolase, where the C-terminal region, including the repeats, determines substrate specificity []. RlpA is a rare lipoprotein A protein that may be important for cell division. Its N-terminal cysteine may be attached to thioglyceride and N-fatty acyl residues [].; PDB: 1X60_A 1UTA_A.
Probab=42.66 E-value=53 Score=20.88 Aligned_cols=46 Identities=22% Similarity=0.198 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhcCcee----ccCCCcEEEEEeCCCCCHHHHHHHHHHHH
Q 018240 302 LYAACLLKKLEEHGVLV----MPESSTRVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 302 ~~~~~~~~~l~~~gi~~----~~~~~~~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
.+++.+.+.|...|... ...+..+.|+.+.+..+.++.+.+++.|+
T Consensus 16 ~~A~~~~~~l~~~g~~~~~~~~~~~~~~yrV~~G~f~~~~~A~~~~~~l~ 65 (76)
T PF05036_consen 16 ENAERLLAKLKKKGPDAYVVQVSKGGPWYRVRVGPFSSREEAEAALRKLK 65 (76)
T ss_dssp HHHHHHHHHHHHHT-----EEEEEETTCEEEEECCECTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcceEEEecCCceEEEEECCCCCHHHHHHHHHHHh
Confidence 47888999997778742 34456677887777888899998888887
No 480
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=41.90 E-value=29 Score=30.40 Aligned_cols=28 Identities=11% Similarity=0.070 Sum_probs=24.4
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEe
Q 018240 149 CGGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
+.|..|+.+++++|++.|+++||-||--
T Consensus 67 ~~~~~YT~~di~elv~yA~~rgI~vIPE 94 (329)
T cd06568 67 GPGGYYTQEDYKDIVAYAAERHITVVPE 94 (329)
T ss_pred CCCCcCCHHHHHHHHHHHHHcCCEEEEe
Confidence 3466899999999999999999988865
No 481
>COG3870 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=41.80 E-value=1.2e+02 Score=21.07 Aligned_cols=53 Identities=9% Similarity=-0.023 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHhcCceecc--CCCcEEEE---EeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018240 302 LYAACLLKKLEEHGVLVMP--ESSTRVRI---VVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 302 ~~~~~~~~~l~~~gi~~~~--~~~~~lRi---~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
.++.++.+.|.++|..... ..++++|- .+-.+..++.++.+...|++.++...
T Consensus 11 ~da~~l~~~L~d~~fraTkLAsTGGFlkaGNTTfliGved~~vd~~~s~Ike~C~~re 68 (109)
T COG3870 11 QDANELEDALTDKNFRATKLASTGGFLKAGNTTFLIGVEDDRVDALRSLIKENCKSRE 68 (109)
T ss_pred ccHHHHHHHHHhCCceeEEeeccCceeecCCeEEEEecccchhHHHHHHHHHHhhhHh
Confidence 3888999999999987632 12334442 12225788999999999999886543
No 482
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=41.73 E-value=1.1e+02 Score=25.61 Aligned_cols=94 Identities=17% Similarity=0.093 Sum_probs=46.0
Q ss_pred EEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCC-CHHHHHHHhcCCCCCccCC
Q 018240 57 LFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTM-DIDLIEAAIRDPKGEIVYP 135 (359)
Q Consensus 57 ~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-~~~~l~~~l~~~~~~~~~~ 135 (359)
+++-+||.-.......+.. .|. |+++-.+-+... ..........+. .|.+ |.+.+++.+++ .
T Consensus 3 ILvlgGTtE~r~la~~L~~-~g~-v~~sv~t~~g~~-----~~~~~~~~~~v~---~G~lg~~~~l~~~l~~-------~ 65 (249)
T PF02571_consen 3 ILVLGGTTEGRKLAERLAE-AGY-VIVSVATSYGGE-----LLKPELPGLEVR---VGRLGDEEGLAEFLRE-------N 65 (249)
T ss_pred EEEEechHHHHHHHHHHHh-cCC-EEEEEEhhhhHh-----hhccccCCceEE---ECCCCCHHHHHHHHHh-------C
Confidence 4556777766666666663 565 544432211111 110010111111 1344 77777777775 4
Q ss_pred ceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEE
Q 018240 136 TTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLH 174 (359)
Q Consensus 136 ~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li 174 (359)
++++|+= -+| |.-...+ +.+.+.|++.|+..+
T Consensus 66 ~i~~vID-ATH--PfA~~is----~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 66 GIDAVID-ATH--PFAAEIS----QNAIEACRELGIPYL 97 (249)
T ss_pred CCcEEEE-CCC--chHHHHH----HHHHHHHhhcCcceE
Confidence 5555542 322 4334433 556667777776544
No 483
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=41.66 E-value=57 Score=30.99 Aligned_cols=58 Identities=16% Similarity=0.128 Sum_probs=39.2
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCC---ce-----------ecChhhHHHHHHHHHHcCcEEEEecc
Q 018240 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG---GR-----------CLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt---G~-----------~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
|++.+.+.|+...+ -++.+|++.+....|. |. .-+.++++++++.|+++|+.||+|-+
T Consensus 31 dl~gi~~~ldyl~~----lGv~~i~l~P~~~~~~~~~gY~~~d~~~id~~~Gt~~d~~~lv~~~h~~gi~vilD~V 102 (551)
T PRK10933 31 DLRGVTQRLDYLQK----LGVDAIWLTPFYVSPQVDNGYDVANYTAIDPTYGTLDDFDELVAQAKSRGIRIILDMV 102 (551)
T ss_pred CHHHHHHhhHHHHh----CCCCEEEECCCCCCCCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 77666666653221 4677888866653332 21 11346799999999999999999976
No 484
>PRK02714 O-succinylbenzoate synthase; Provisional
Probab=41.58 E-value=88 Score=27.27 Aligned_cols=84 Identities=5% Similarity=0.021 Sum_probs=47.6
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc
Q 018240 110 NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV 189 (359)
Q Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 189 (359)
.+.|+..+.++..+.++...+. ....+.+++-|.. .++++.+.++.++.+++|..||.- ... .
T Consensus 168 vDaN~~w~~~~A~~~~~~l~~l---~~~~i~~iEqP~~--------~~~~~~~~~l~~~~~~Pia~DEs~--~~~----~ 230 (320)
T PRK02714 168 LDANGGLSLEEAKRWLQLCDRR---LSGKIEFIEQPLP--------PDQFDEMLQLSQDYQTPIALDESV--ANL----A 230 (320)
T ss_pred EECCCCCCHHHHHHHHHHHhhc---cCCCccEEECCCC--------cccHHHHHHHHHhCCCCEEECCcc--CCH----H
Confidence 3444555666655544431000 0124557766543 335788888888889999999962 111 1
Q ss_pred hhHhhh--cCccEEEEeccccCC
Q 018240 190 PVRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 190 ~~~~~~--~~~d~~~~s~~K~~g 210 (359)
.+..+. ...|++..-.+|+-|
T Consensus 231 d~~~~~~~~a~d~v~ik~~k~GG 253 (320)
T PRK02714 231 QLQQCYQQGWRGIFVIKPAIAGS 253 (320)
T ss_pred HHHHHHHcCCCCEEEEcchhcCC
Confidence 122221 257788888888644
No 485
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=41.54 E-value=28 Score=30.88 Aligned_cols=28 Identities=14% Similarity=0.121 Sum_probs=24.5
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEe
Q 018240 149 CGGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
+.|..|+.+++++|.+.|+++|+-||--
T Consensus 78 ~~~~~YT~~di~eiv~yA~~rgI~VIPE 105 (357)
T cd06563 78 PYGGFYTQEEIREIVAYAAERGITVIPE 105 (357)
T ss_pred ccCceECHHHHHHHHHHHHHcCCEEEEe
Confidence 4467899999999999999999988865
No 486
>cd04919 ACT_AK-Hom3_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase (AK) HOM3. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase (AK) HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae, and other related ACT domains. AK is the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP, and in fungi, is responsible for the production of threonine, isoleucine and methionine. S. cerevisiae has a single AK, which is regulated by feedback, allosteric inhibition by L-threonine. Recent studies shown that the allosteric transition triggered by binding of threonine to AK involves a large change in the conformation of the native hexameric enzyme that is converted to an inactive one of different shape and substantially smaller hydrodynamic size. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=40.95 E-value=86 Score=19.27 Aligned_cols=46 Identities=15% Similarity=0.311 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhcCcee--ccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018240 303 YAACLLKKLEEHGVLV--MPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~--~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
-..++.+.|.+.||.+ ...+....++++ ..++++.+++++.|.+.+
T Consensus 17 ~~~~if~~L~~~~I~v~~i~q~~s~~~isf--~v~~~~~~~a~~~lh~~~ 64 (66)
T cd04919 17 IAGRMFTTLADHRINIEMISQGASEINISC--VIDEKDAVKALNIIHTNL 64 (66)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCccceEEE--EEeHHHHHHHHHHHHHHH
Confidence 4557888999999976 222222356666 467788888888876654
No 487
>PF10678 DUF2492: Protein of unknown function (DUF2492); InterPro: IPR019620 This entry describes a family of small cytosolic proteins, about 80 amino acids in length, in which the eight invariant residues include three His residues and two Cys residues. Two pairs of these invariant residues occur in motifs HxH (where x is A or G) and CxH, both of which suggest metal-binding activity. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulphatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulphur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulphatase/maturase systems.
Probab=40.50 E-value=84 Score=20.76 Aligned_cols=47 Identities=19% Similarity=0.224 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCC
Q 018240 40 AFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNS 87 (359)
Q Consensus 40 ~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~ 87 (359)
..+|++++.+.||.+..+-+.|+..--...|...+.++| +++..+..
T Consensus 22 ~~~L~~ai~~~FG~~arFhTCSae~m~a~eLv~FL~~rg-Kfi~~~~g 68 (78)
T PF10678_consen 22 KEELKAAIIEKFGEDARFHTCSAEGMTADELVDFLEERG-KFIPSDDG 68 (78)
T ss_pred HHHHHHHHHHHhCCCceEEecCCCCCCHHHHHHHHHHcC-CEeecCCC
Confidence 579999999999999888888876655555555554344 56555443
No 488
>smart00839 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase. Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related. They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction.
Probab=40.28 E-value=1.3e+02 Score=21.06 Aligned_cols=49 Identities=20% Similarity=0.266 Sum_probs=30.2
Q ss_pred HHHHHHhcCceeccC---CCcEEEEE-eCCCC----CHHHHH-HHHHHHHHHHHHHHh
Q 018240 307 LLKKLEEHGVLVMPE---SSTRVRIV-VHHQI----SANDVH-YTLSCFQKIYAGVCE 355 (359)
Q Consensus 307 ~~~~l~~~gi~~~~~---~~~~lRi~-~~~~~----~~~~i~-~~~~~l~~~~~~~~~ 355 (359)
..+.|+++||.+.|. ..+.+..+ +-+.. +++++. ++.+.|.+.+.++.+
T Consensus 40 a~~~L~~rGi~~~PD~~~NaGGvi~s~~E~~~~~~~~~e~v~~~~~~~i~~~~~~v~~ 97 (102)
T smart00839 40 ADDILEDRGVLYAPDFAANAGGVIVSALEMLQNLARTAEEVFTDLSEIMRNALEEIFE 97 (102)
T ss_pred HHHHHHHCCCEEcCcceecCCCEEeehhhhhcccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 567789999999775 23333333 21111 555555 777888777776654
No 489
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=40.12 E-value=1.9e+02 Score=26.00 Aligned_cols=141 Identities=17% Similarity=0.245 Sum_probs=74.8
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCCC--C-ccCCChHHHHHHHHHHHHhCC-CCeEEcCCchHHHHHHHHHhhhhcCC
Q 018240 4 RTVDLRSDTVTKPTEAMRAAMASAEVDD--D-VLMHDPTAFRLETEMAKVMGK-EAGLFVPSGTMGNLISVLVHCETRGS 79 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~~--~-~~~~~~~~~~l~~~la~~~~~-~~~~~~~~gt~a~~~~l~~~~~~~g~ 79 (359)
+++..++..+.....++.+.+....... . ..-.+.+...+|..+..+... +.++++.+|.=+...+=.+-. -|-
T Consensus 27 ~~~~h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R~~~ia~~--~g~ 104 (383)
T COG0075 27 PMVGHRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGERFAEIAER--YGA 104 (383)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHHHHHHHHH--hCC
Confidence 3344344333333344444444432211 2 223467889999999999974 456777888644433322222 333
Q ss_pred eEEecCCCcceeeccccccc----cCCccceeeecCCC--CC-CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018240 80 EVILGDNSHIHIYENGGIST----IGGVHPRTVKNNQD--GT-MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~----~~g~~~~~v~~~~~--~~-~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
.+.+.+..+........+.. ...++.+.+.+.+. |. -+++++.+.+++ .-..++++...+ -+|.
T Consensus 105 ~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~--------~g~l~iVDaVsS-~Gg~ 175 (383)
T COG0075 105 EVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKE--------HGALLIVDAVSS-LGGE 175 (383)
T ss_pred ceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHH--------cCCEEEEEeccc-CCCc
Confidence 44443333333322112222 23456666655443 32 278899999984 455677777776 4566
Q ss_pred ecC
Q 018240 153 CLS 155 (359)
Q Consensus 153 ~~~ 155 (359)
.+.
T Consensus 176 ~~~ 178 (383)
T COG0075 176 PLK 178 (383)
T ss_pred ccc
Confidence 554
No 490
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=40.12 E-value=32 Score=29.73 Aligned_cols=27 Identities=15% Similarity=0.194 Sum_probs=23.7
Q ss_pred CceecChhhHHHHHHHHHHcCcEEEEe
Q 018240 150 GGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
.+-.++.+++++|.+.|+++|+-||--
T Consensus 65 ~~~~yT~~di~elv~yA~~rgI~viPE 91 (303)
T cd02742 65 PGGFYTYAQLKDIIEYAAARGIEVIPE 91 (303)
T ss_pred CCCeECHHHHHHHHHHHHHcCCEEEEe
Confidence 356899999999999999999988865
No 491
>PRK10949 protease 4; Provisional
Probab=39.40 E-value=51 Score=31.72 Aligned_cols=57 Identities=25% Similarity=0.345 Sum_probs=38.4
Q ss_pred CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEE
Q 018240 114 GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 114 ~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 175 (359)
+.+..+.+.+.|++..++ +++++|++ -..+ |+|.....+++.+-.+..++.|.++++
T Consensus 345 g~~~~~~~~~~l~~a~~D---~~vkaVvL-rInS-pGGs~~ase~i~~~i~~~r~~gKPVva 401 (618)
T PRK10949 345 GNVGGDTTAAQIRDARLD---PKVKAIVL-RVNS-PGGSVTASEVIRAELAAARAAGKPVVV 401 (618)
T ss_pred CCcCHHHHHHHHHHHHhC---CCCcEEEE-EecC-CCCcHHHHHHHHHHHHHHHhcCCcEEE
Confidence 445555666666543222 78889988 4444 889888878887777777777777775
No 492
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=39.18 E-value=87 Score=24.56 Aligned_cols=52 Identities=17% Similarity=0.307 Sum_probs=21.4
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecC----hhhHHHHHHHHHHcCcEEEE
Q 018240 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLS----VEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~----~~~l~~i~~~~~~~~~~li~ 175 (359)
.+++++.+.+. .++.+|++++...--.+..-+ .+.+..+.++|+++|+.+++
T Consensus 129 ~~~l~~~~~~~------~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 129 LEELEAALKEL------YGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp HHHHHHHHTT----------SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred HHHHHHHHhhc------CCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 34555555531 246677776655422221111 12455566666666655543
No 493
>TIGR00334 5S_RNA_mat_M5 ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases.
Probab=39.08 E-value=57 Score=25.40 Aligned_cols=44 Identities=25% Similarity=0.318 Sum_probs=32.4
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018240 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
|...|.+.++ +-++++ + |..++.+-++.|.++.++.|++|..|.
T Consensus 13 D~~~lk~~~d------------~~~I~T--~---Gs~i~~~~i~~i~~~~~~rgVIIfTDp 56 (174)
T TIGR00334 13 DQARIKQAFD------------VDVIET--N---GSALKDETINLIKKAQKKQGVIILTDP 56 (174)
T ss_pred HHHHHHHhcC------------ceEEEE--C---CCccCHHHHHHHHHHhhcCCEEEEeCC
Confidence 7777777765 113312 2 455678889999999999999999996
No 494
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=38.90 E-value=2.6e+02 Score=24.20 Aligned_cols=121 Identities=19% Similarity=0.185 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHhCCCC-eEEcCCchHHHHHHHHHhhhh-cC--CeEEecCCCcceeeccc--cccccCCccceeeecCCC
Q 018240 40 AFRLETEMAKVMGKEA-GLFVPSGTMGNLISVLVHCET-RG--SEVILGDNSHIHIYENG--GISTIGGVHPRTVKNNQD 113 (359)
Q Consensus 40 ~~~l~~~la~~~~~~~-~~~~~~gt~a~~~~l~~~~~~-~g--~~vl~~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~ 113 (359)
...|+-.+.+-+.... .+++.+|.++|.....++..+ .| ...++..+. ......+ ......|++++.++...+
T Consensus 49 ~RKLefll~eal~~g~dTlvT~GgiQSNh~r~tAavA~~lGl~~v~ile~~~-~~y~~ngn~Ll~~l~G~~~~~~~~~~d 127 (323)
T COG2515 49 IRKLEFLLGEALRKGADTLVTYGGIQSNHVRQTAAVAAKLGLKCVLILENIE-ANYLLNGNLLLSKLMGAEVRAVDAGTD 127 (323)
T ss_pred HHHHHHHHhhhhhcCCcEEEEecccchhHHHHHHHHHHhcCCcEEEEEeccc-cccccccchhhhhhcCceEEEecCCCC
Confidence 4566666766554433 588889999988766655432 22 233344433 1000001 124567888888876666
Q ss_pred C--CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHH
Q 018240 114 G--TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKK 168 (359)
Q Consensus 114 ~--~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~ 168 (359)
. +...+.+.+.+++. .+...|+.+.- .||.|..-=.+-..+|.+.+++
T Consensus 128 ~~~~~~~~~~~e~~~~~------g~kpyvIp~GG-~~~~g~lGyv~~a~Ei~~Q~~~ 177 (323)
T COG2515 128 IGINASAEELAEEVRKQ------GGKPYVIPEGG-SSPLGALGYVRLALEIAEQAEQ 177 (323)
T ss_pred hhhchhhHHHHHHHHhc------CCCCcEeccCC-cCccccccHHHHHHHHHHHHhh
Confidence 6 44567777777642 22334444333 3575554333456677777765
No 495
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=38.80 E-value=1.3e+02 Score=26.49 Aligned_cols=73 Identities=15% Similarity=0.130 Sum_probs=42.7
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEE-------EeccccCCCceecCh-hhHHHHHHHHHHcCcEEEEecccccchhhhcC
Q 018240 117 DIDLIEAAIRDPKGEIVYPTTRLIC-------LENTHANCGGRCLSV-EYTDSVGEIAKKHGLKLHIDGARIFNAAVALG 188 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~-------i~~~~~~ptG~~~~~-~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~ 188 (359)
+.+..+++++. ...+|- ++++.- .+|.-+|. .-+.+.++.++++|+.||.|+- ..+.|
T Consensus 161 T~e~a~~Li~a--------GAD~vKVGIGpGSiCtTr~-vtGvG~PQltAV~~~a~~a~~~gvpiIADGG-----i~~sG 226 (346)
T PRK05096 161 TGEMVEELILS--------GADIVKVGIGPGSVCTTRV-KTGVGYPQLSAVIECADAAHGLGGQIVSDGG-----CTVPG 226 (346)
T ss_pred CHHHHHHHHHc--------CCCEEEEcccCCccccCcc-ccccChhHHHHHHHHHHHHHHcCCCEEecCC-----ccccc
Confidence 77788888873 333332 112222 46666664 2344444566788999999972 12234
Q ss_pred chhHhhhcCccEEEE
Q 018240 189 VPVRRLVQAADSASV 203 (359)
Q Consensus 189 ~~~~~~~~~~d~~~~ 203 (359)
.-...+..++|.+.+
T Consensus 227 DI~KAlaaGAd~VMl 241 (346)
T PRK05096 227 DVAKAFGGGADFVML 241 (346)
T ss_pred HHHHHHHcCCCEEEe
Confidence 445566668887765
No 496
>TIGR03853 matur_matur probable metal-binding protein. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulfatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulfur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulfatase/maturase systems.
Probab=38.79 E-value=96 Score=20.39 Aligned_cols=47 Identities=17% Similarity=0.177 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCC
Q 018240 40 AFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNS 87 (359)
Q Consensus 40 ~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~ 87 (359)
..+|+++|.+.||.+..+-+.|+..--...|...+.++| +++-.+..
T Consensus 20 ~~~L~~~i~~~FG~~arFhTCSa~~m~a~~Li~FL~~kg-Kfi~~~~g 66 (77)
T TIGR03853 20 RESLKAAIEQKFGEDARFHTCSAEGMTADELLQFLLKKG-KFIESDGG 66 (77)
T ss_pred HHHHHHHHHHHhCCCceEeecccccCCHHHHHHHHHHCC-CEeecCCc
Confidence 578999999999999888888876655555555554454 55554443
No 497
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=38.52 E-value=1.4e+02 Score=21.62 Aligned_cols=49 Identities=14% Similarity=0.228 Sum_probs=35.2
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecc
Q 018240 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++.+++++.++ ..+.+|++ .+.. .+.. .+ .++.+..++.|+-+.+-+.
T Consensus 45 ~l~~~~l~~ll~--------~~peivli-GTG~--~~~~~~~----~~~~~~l~~~Gi~ve~m~T 94 (117)
T cd05126 45 GLQPEELEELLE--------EGVEVIVI-GTGQ--SGALKVP----PETVEKLEKRGVEVLVLPT 94 (117)
T ss_pred cCCHHHHHHHHh--------cCCCEEEE-cCCC--CccccCC----HHHHHHHHhcCCEEEEcCh
Confidence 468999999998 56777777 5443 3553 34 6666788889988888654
No 498
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=38.42 E-value=2.7e+02 Score=24.31 Aligned_cols=43 Identities=12% Similarity=0.163 Sum_probs=26.9
Q ss_pred CceeEEEEeccccCCCceecChhhHHHHHHHHH------HcCcEEEEecc
Q 018240 135 PTTRLICLENTHANCGGRCLSVEYTDSVGEIAK------KHGLKLHIDGA 178 (359)
Q Consensus 135 ~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~------~~~~~li~D~a 178 (359)
.+...|++++++..+.-.. -.++++++.++++ .++.++++|..
T Consensus 195 ~~~D~ViIDTaGr~~~~~~-l~~eL~~~~~v~~~~~~~~p~~~~LVl~a~ 243 (318)
T PRK10416 195 RGIDVLIIDTAGRLHNKTN-LMEELKKIKRVIKKADPDAPHEVLLVLDAT 243 (318)
T ss_pred CCCCEEEEeCCCCCcCCHH-HHHHHHHHHHHHhhhcCCCCceEEEEEECC
Confidence 4567899988776432111 1146666666664 35678999986
No 499
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=38.17 E-value=82 Score=26.50 Aligned_cols=83 Identities=14% Similarity=0.106 Sum_probs=49.3
Q ss_pred eecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc
Q 018240 108 VKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL 187 (359)
Q Consensus 108 v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~ 187 (359)
+..+.++..+.++..+.++.. ....+.+++-|.. .++++.+.+++++.+++|..||.. ...
T Consensus 132 l~vDan~~~~~~~a~~~~~~l------~~~~i~~iEeP~~--------~~d~~~~~~l~~~~~ipia~dE~~--~~~--- 192 (265)
T cd03315 132 LRVDANRGWTPKQAIRALRAL------EDLGLDYVEQPLP--------ADDLEGRAALARATDTPIMADESA--FTP--- 192 (265)
T ss_pred EEEeCCCCcCHHHHHHHHHHH------HhcCCCEEECCCC--------cccHHHHHHHHhhCCCCEEECCCC--CCH---
Confidence 344455556777665555532 1233456766432 245788888888899999999962 111
Q ss_pred CchhHhh--hcCccEEEEeccccCC
Q 018240 188 GVPVRRL--VQAADSASVCLSKGLG 210 (359)
Q Consensus 188 ~~~~~~~--~~~~d~~~~s~~K~~g 210 (359)
.....+ ...+|++..-.+|.-|
T Consensus 193 -~~~~~~i~~~~~d~v~~k~~~~GG 216 (265)
T cd03315 193 -HDAFRELALGAADAVNIKTAKTGG 216 (265)
T ss_pred -HHHHHHHHhCCCCEEEEecccccC
Confidence 112222 2367888888888544
No 500
>cd03318 MLE Muconate Lactonizing Enzyme (MLE), an homooctameric enzyme, catalyses the conversion of cis,cis-muconate (CCM) to muconolactone (ML) in the catechol branch of the beta-ketoadipate pathway. This pathway is used in soil microbes to breakdown lignin-derived aromatics, catechol and protocatechuate, to citric acid cycle intermediates. Some bacterial species are also capable of dehalogenating chloroaromatic compounds by the action of chloromuconate lactonizing enzymes (Cl-MLEs). MLEs are members of the enolase superfamily characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and that is stabilized by coordination to the essential Mg2+ ion.
Probab=38.15 E-value=77 Score=28.19 Aligned_cols=48 Identities=21% Similarity=0.248 Sum_probs=28.3
Q ss_pred hhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh--cCccEEEEeccccCC
Q 018240 157 EYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d~~~~s~~K~~g 210 (359)
++++.+.+++++.++.|..||.- .. ......+. ..+|++..-.+|..|
T Consensus 226 ~~~~~~~~l~~~~~~pia~dE~~--~~----~~~~~~~i~~~~~d~~~~d~~~~GG 275 (365)
T cd03318 226 ENLDGLARLRSRNRVPIMADESV--SG----PADAFELARRGAADVFSLKIAKSGG 275 (365)
T ss_pred ccHHHHHHHHhhcCCCEEcCccc--CC----HHHHHHHHHhCCCCeEEEeecccCC
Confidence 34677777777788888888851 11 11122221 246788777777533
Done!