Query 018242
Match_columns 359
No_of_seqs 172 out of 1986
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 12:09:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018242.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018242hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 100.0 7E-31 2.4E-35 238.4 30.8 299 26-358 10-312 (322)
2 3sre_A PON1, serum paraoxonase 100.0 1.2E-26 3.9E-31 210.8 28.4 283 27-357 42-355 (355)
3 3e5z_A Putative gluconolactona 99.9 2.6E-23 9.1E-28 185.8 31.9 256 25-358 20-285 (296)
4 3dr2_A Exported gluconolactona 99.9 2.1E-23 7.1E-28 187.6 30.0 259 22-357 34-304 (305)
5 3g4e_A Regucalcin; six bladed 99.9 8.5E-24 2.9E-28 189.5 26.7 238 27-301 6-250 (297)
6 1pjx_A Dfpase, DIISOPROPYLFLUO 99.9 6.8E-22 2.3E-26 177.6 28.2 265 30-358 14-298 (314)
7 1q7f_A NHL, brain tumor CG1071 99.9 6.8E-20 2.3E-24 162.6 31.2 245 32-358 28-279 (286)
8 2ghs_A AGR_C_1268P; regucalcin 99.9 2.2E-20 7.6E-25 169.5 28.2 224 25-291 40-270 (326)
9 2qc5_A Streptogramin B lactona 99.9 2.3E-19 8E-24 159.5 31.1 272 27-358 12-299 (300)
10 2dg1_A DRP35, lactonase; beta 99.9 2.7E-19 9.1E-24 162.2 31.1 202 31-267 42-254 (333)
11 2p4o_A Hypothetical protein; p 99.9 1.7E-19 6E-24 162.1 27.7 215 34-300 32-263 (306)
12 2z2n_A Virginiamycin B lyase; 99.9 2.6E-18 8.9E-23 152.6 33.0 267 32-358 13-294 (299)
13 1rwi_B Serine/threonine-protei 99.9 2.5E-19 8.6E-24 157.3 25.5 234 35-358 25-263 (270)
14 3hrp_A Uncharacterized protein 99.9 1.1E-18 3.9E-23 163.1 30.4 243 32-358 129-409 (409)
15 4hw6_A Hypothetical protein, I 99.8 1.2E-18 4.3E-23 163.8 28.8 242 32-359 137-433 (433)
16 3fvz_A Peptidyl-glycine alpha- 99.8 3.7E-18 1.3E-22 154.9 25.2 254 32-358 22-321 (329)
17 3v64_C Agrin; beta propeller, 99.8 3.2E-18 1.1E-22 156.6 24.7 211 28-287 67-282 (349)
18 3tc9_A Hypothetical hydrolase; 99.8 1.4E-17 4.7E-22 156.6 29.2 244 31-359 134-430 (430)
19 3v65_B Low-density lipoprotein 99.8 3.1E-18 1.1E-22 158.9 23.1 211 30-289 112-327 (386)
20 1npe_A Nidogen, entactin; glyc 99.8 7.7E-18 2.6E-22 148.1 24.0 208 34-289 36-247 (267)
21 1ijq_A LDL receptor, low-densi 99.8 1.2E-17 4.2E-22 150.7 24.6 207 31-286 27-244 (316)
22 2qe8_A Uncharacterized protein 99.8 4E-17 1.4E-21 149.0 27.4 211 34-282 17-280 (343)
23 3dsm_A Uncharacterized protein 99.8 1.4E-17 4.7E-22 151.2 22.7 197 32-263 82-285 (328)
24 3sov_A LRP-6, low-density lipo 99.8 9E-18 3.1E-22 151.5 20.9 210 31-288 32-246 (318)
25 3p5b_L Low density lipoprotein 99.8 1.2E-16 4.2E-21 148.8 25.9 210 30-288 108-328 (400)
26 1npe_A Nidogen, entactin; glyc 99.8 2.9E-16 1E-20 138.0 25.8 229 47-358 3-237 (267)
27 3vgz_A Uncharacterized protein 99.8 1.9E-15 6.6E-20 137.2 31.1 218 25-289 34-271 (353)
28 4a2l_A BT_4663, two-component 99.8 2.9E-16 1E-20 159.0 27.8 239 36-358 359-613 (795)
29 2z2n_A Virginiamycin B lyase; 99.8 3.7E-16 1.3E-20 138.6 25.1 196 33-283 56-257 (299)
30 2ism_A Putative oxidoreductase 99.8 5.9E-16 2E-20 141.7 26.8 218 24-267 22-288 (352)
31 3v64_C Agrin; beta propeller, 99.8 1.7E-15 5.9E-20 138.5 29.4 232 36-356 36-272 (349)
32 3v9f_A Two-component system se 99.8 3.3E-16 1.1E-20 158.3 26.9 276 36-358 315-610 (781)
33 4a0p_A LRP6, LRP-6, low-densit 99.7 2.8E-16 9.6E-21 154.1 25.4 198 27-268 30-229 (628)
34 2qc5_A Streptogramin B lactona 99.7 2.1E-15 7.1E-20 133.8 28.7 197 33-284 61-263 (300)
35 3a9g_A Putative uncharacterize 99.7 8.1E-16 2.8E-20 140.8 25.7 176 25-224 21-220 (354)
36 3v65_B Low-density lipoprotein 99.7 3.8E-15 1.3E-19 138.1 30.3 230 38-356 81-315 (386)
37 3kya_A Putative phosphatase; s 99.7 1.2E-15 4.2E-20 143.7 27.0 248 31-358 136-474 (496)
38 1rwi_B Serine/threonine-protei 99.7 3.5E-16 1.2E-20 137.1 21.3 190 31-268 64-256 (270)
39 3fvz_A Peptidyl-glycine alpha- 99.7 2.8E-16 9.4E-21 142.5 20.9 214 31-282 88-323 (329)
40 1ijq_A LDL receptor, low-densi 99.7 7.8E-15 2.7E-19 132.3 29.5 224 48-357 4-236 (316)
41 3v9f_A Two-component system se 99.7 1.3E-15 4.4E-20 153.9 26.0 267 36-358 365-655 (781)
42 3s94_A LRP-6, low-density lipo 99.7 1.3E-15 4.4E-20 149.2 23.8 198 27-268 33-235 (619)
43 3hfq_A Uncharacterized protein 99.7 1.1E-14 3.9E-19 132.3 28.5 199 32-267 38-262 (347)
44 4a2l_A BT_4663, two-component 99.7 1.3E-14 4.4E-19 146.9 30.3 274 36-358 265-570 (795)
45 1n7d_A LDL receptor, low-densi 99.7 1.3E-16 4.3E-21 158.7 15.1 223 30-297 402-631 (699)
46 3m0c_C LDL receptor, low-densi 99.7 4.9E-15 1.7E-19 148.3 25.2 195 30-268 420-624 (791)
47 1q7f_A NHL, brain tumor CG1071 99.7 2.5E-15 8.5E-20 133.0 20.7 185 33-264 76-269 (286)
48 3dsm_A Uncharacterized protein 99.7 2.5E-14 8.4E-19 129.7 27.1 254 51-358 13-301 (328)
49 3s94_A LRP-6, low-density lipo 99.7 1.5E-14 5.1E-19 141.7 26.2 197 27-268 342-543 (619)
50 3hrp_A Uncharacterized protein 99.7 1.8E-14 6E-19 134.6 25.3 196 33-268 171-402 (409)
51 3p5b_L Low density lipoprotein 99.7 7.9E-14 2.7E-18 129.8 28.7 223 48-356 86-317 (400)
52 3u4y_A Uncharacterized protein 99.7 2.1E-13 7.1E-18 122.9 29.9 196 27-267 35-243 (331)
53 3sov_A LRP-6, low-density lipo 99.7 7.8E-14 2.7E-18 125.7 26.5 196 96-357 35-236 (318)
54 3vgz_A Uncharacterized protein 99.7 1.4E-13 4.9E-18 124.8 28.5 190 36-266 143-335 (353)
55 4a0p_A LRP6, LRP-6, low-densit 99.6 2.2E-14 7.6E-19 140.6 23.6 204 27-268 333-541 (628)
56 3m0c_C LDL receptor, low-densi 99.6 7.5E-14 2.6E-18 139.7 27.8 198 95-356 423-629 (791)
57 2fp8_A Strictosidine synthase; 99.6 1E-14 3.5E-19 131.7 18.3 189 34-267 80-304 (322)
58 2qe8_A Uncharacterized protein 99.6 1.2E-13 4.1E-18 125.9 23.9 199 32-267 65-312 (343)
59 1l0q_A Surface layer protein; 99.6 2.8E-12 9.5E-17 118.2 32.7 204 34-288 32-241 (391)
60 1ri6_A Putative isomerase YBHE 99.6 1.6E-12 5.6E-17 117.1 30.2 197 33-267 37-253 (343)
61 3e5z_A Putative gluconolactona 99.6 3.9E-13 1.3E-17 119.5 25.3 184 33-265 68-277 (296)
62 2p9w_A MAL S 1 allergenic prot 99.6 2.5E-13 8.6E-18 120.5 23.5 203 26-265 6-254 (334)
63 3scy_A Hypothetical bacterial 99.6 1.3E-12 4.4E-17 119.4 28.7 199 32-265 48-279 (361)
64 1jof_A Carboxy-CIS,CIS-muconat 99.6 7.2E-13 2.5E-17 121.6 26.9 198 31-266 37-276 (365)
65 3g4e_A Regucalcin; six bladed 99.6 1.2E-13 4.1E-18 123.2 19.8 188 34-267 54-264 (297)
66 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.5E-13 5.1E-18 122.9 20.4 189 34-267 71-290 (314)
67 3hfq_A Uncharacterized protein 99.6 1.5E-12 5.2E-17 118.2 27.4 207 33-267 85-308 (347)
68 2dg1_A DRP35, lactonase; beta 99.6 6.9E-13 2.4E-17 119.8 24.7 187 33-265 86-300 (333)
69 1nir_A Nitrite reductase; hemo 99.6 1.8E-12 6.1E-17 125.4 27.8 197 25-264 172-389 (543)
70 3ott_A Two-component system se 99.6 1.7E-13 5.8E-18 138.0 20.7 203 36-286 326-550 (758)
71 3das_A Putative oxidoreductase 99.6 4.6E-12 1.6E-16 114.4 27.2 174 27-223 25-223 (347)
72 4hw6_A Hypothetical protein, I 99.5 8.4E-13 2.9E-17 124.0 22.8 154 95-268 138-296 (433)
73 3u4y_A Uncharacterized protein 99.5 3.9E-12 1.3E-16 114.5 26.1 198 40-283 4-210 (331)
74 1n7d_A LDL receptor, low-densi 99.5 2E-13 6.8E-18 135.7 18.7 167 55-266 386-561 (699)
75 1nir_A Nitrite reductase; hemo 99.5 9.7E-12 3.3E-16 120.3 30.0 201 40-289 144-364 (543)
76 3hxj_A Pyrrolo-quinoline quino 99.5 3.7E-12 1.3E-16 114.6 24.4 206 107-357 107-322 (330)
77 3tc9_A Hypothetical hydrolase; 99.5 6.3E-13 2.2E-17 124.8 19.7 153 95-268 136-293 (430)
78 3bws_A Protein LP49; two-domai 99.5 1.2E-11 4.1E-16 115.6 28.3 274 34-358 123-431 (433)
79 3dr2_A Exported gluconolactona 99.5 2.3E-12 7.8E-17 115.3 21.8 189 33-265 85-297 (305)
80 1ri6_A Putative isomerase YBHE 99.5 3.7E-11 1.3E-15 108.1 28.2 197 35-267 85-299 (343)
81 3kya_A Putative phosphatase; s 99.5 5E-12 1.7E-16 119.2 23.1 161 96-268 139-333 (496)
82 1l0q_A Surface layer protein; 99.5 1.6E-11 5.6E-16 113.0 25.6 210 27-289 69-284 (391)
83 3ott_A Two-component system se 99.5 9.3E-12 3.2E-16 125.3 25.7 178 37-264 66-250 (758)
84 1pby_B Quinohemoprotein amine 99.5 3.9E-11 1.3E-15 107.6 27.1 211 25-288 24-277 (337)
85 2g8s_A Glucose/sorbosone dehyd 99.5 9.6E-12 3.3E-16 113.7 23.1 179 25-223 10-219 (353)
86 2iwa_A Glutamine cyclotransfer 99.5 1.1E-11 3.8E-16 107.7 22.1 196 23-266 10-227 (266)
87 3bws_A Protein LP49; two-domai 99.5 4.5E-11 1.5E-15 111.6 26.9 193 35-265 171-365 (433)
88 2ghs_A AGR_C_1268P; regucalcin 99.5 9E-12 3.1E-16 112.6 21.4 187 34-267 90-294 (326)
89 3no2_A Uncharacterized protein 99.4 2.8E-10 9.6E-15 100.3 29.4 176 44-267 4-186 (276)
90 2p4o_A Hypothetical protein; p 99.4 1.4E-11 4.9E-16 110.2 20.6 187 34-266 72-279 (306)
91 3no2_A Uncharacterized protein 99.4 2.3E-10 7.7E-15 100.9 27.7 227 23-323 26-261 (276)
92 3qqz_A Putative uncharacterize 99.4 1.1E-10 3.8E-15 100.9 23.9 196 29-265 21-243 (255)
93 1qks_A Cytochrome CD1 nitrite 99.4 2.2E-10 7.6E-15 110.9 27.9 199 25-266 190-410 (567)
94 2ymu_A WD-40 repeat protein; u 99.4 1.2E-09 4.2E-14 105.7 33.2 264 34-354 304-575 (577)
95 3scy_A Hypothetical bacterial 99.4 1.2E-10 4.1E-15 106.3 24.2 207 33-267 99-328 (361)
96 1jmx_B Amine dehydrogenase; ox 99.4 6.7E-11 2.3E-15 106.7 20.8 231 26-289 35-334 (349)
97 2ymu_A WD-40 repeat protein; u 99.4 2.2E-09 7.5E-14 103.9 32.5 267 34-357 263-537 (577)
98 1jof_A Carboxy-CIS,CIS-muconat 99.4 8.9E-11 3.1E-15 107.6 21.5 198 35-267 84-332 (365)
99 3c75_H MADH, methylamine dehyd 99.3 1.2E-10 4.2E-15 108.3 20.7 237 25-287 112-409 (426)
100 3a9g_A Putative uncharacterize 99.3 1.6E-10 5.4E-15 105.6 21.1 197 32-265 71-331 (354)
101 4g56_B MGC81050 protein; prote 99.3 4.8E-10 1.6E-14 102.5 24.3 278 37-358 46-342 (357)
102 3hxj_A Pyrrolo-quinoline quino 99.3 4.4E-10 1.5E-14 100.8 23.6 186 44-290 107-293 (330)
103 3c75_H MADH, methylamine dehyd 99.3 5.3E-10 1.8E-14 104.0 24.6 114 43-194 82-213 (426)
104 2ism_A Putative oxidoreductase 99.3 5.1E-11 1.7E-15 108.8 17.4 200 33-265 74-334 (352)
105 3ei3_B DNA damage-binding prot 99.3 5.9E-09 2E-13 95.6 30.7 200 30-267 70-273 (383)
106 1gxr_A ESG1, transducin-like e 99.3 2.6E-08 8.9E-13 88.9 34.1 195 33-268 51-247 (337)
107 2iwa_A Glutamine cyclotransfer 99.3 2.8E-10 9.6E-15 98.9 20.0 167 23-232 55-237 (266)
108 1gxr_A ESG1, transducin-like e 99.3 4.1E-09 1.4E-13 94.2 28.0 189 35-267 99-287 (337)
109 1cru_A Protein (soluble quinop 99.3 1.2E-10 4E-15 109.9 18.3 185 23-223 17-249 (454)
110 1pby_B Quinohemoprotein amine 99.3 4.9E-10 1.7E-14 100.4 21.7 195 35-263 83-298 (337)
111 1k8k_C P40, ARP2/3 complex 41 99.3 8.1E-09 2.8E-13 93.8 30.2 223 34-300 9-253 (372)
112 1jmx_B Amine dehydrogenase; ox 99.3 8.2E-10 2.8E-14 99.5 22.8 161 100-289 4-184 (349)
113 3ow8_A WD repeat-containing pr 99.3 7.9E-09 2.7E-13 92.9 28.7 189 35-268 82-271 (321)
114 2oiz_A Aromatic amine dehydrog 99.3 3E-09 1E-13 97.4 26.1 233 25-287 44-343 (361)
115 3zwl_B Eukaryotic translation 99.3 1.7E-08 5.8E-13 91.3 30.6 211 33-288 32-257 (369)
116 2mad_H Methylamine dehydrogena 99.3 2.2E-08 7.6E-13 92.0 31.4 194 26-264 61-286 (373)
117 2hqs_A Protein TOLB; TOLB, PAL 99.3 2.6E-09 8.9E-14 99.7 25.5 187 35-266 180-375 (415)
118 4ery_A WD repeat-containing pr 99.3 2.7E-08 9.1E-13 88.5 31.0 204 34-287 24-230 (312)
119 2ece_A 462AA long hypothetical 99.2 6.3E-09 2.2E-13 96.1 26.8 275 22-322 58-399 (462)
120 2ece_A 462AA long hypothetical 99.2 1.9E-09 6.6E-14 99.6 23.4 198 33-263 137-399 (462)
121 1qks_A Cytochrome CD1 nitrite 99.2 5.7E-09 2E-13 101.0 27.7 206 35-289 155-382 (567)
122 3ow8_A WD repeat-containing pr 99.2 6.6E-08 2.3E-12 86.8 32.9 269 35-358 34-320 (321)
123 4gqb_B Methylosome protein 50; 99.2 7.4E-09 2.5E-13 94.1 26.3 192 36-267 85-280 (344)
124 3nol_A Glutamine cyclotransfer 99.2 1.3E-09 4.4E-14 93.7 19.5 187 25-263 34-243 (262)
125 4e54_B DNA damage-binding prot 99.2 5.2E-09 1.8E-13 98.1 25.5 196 35-268 121-319 (435)
126 2oiz_A Aromatic amine dehydrog 99.2 1.1E-09 3.8E-14 100.3 19.9 213 34-258 108-360 (361)
127 3nok_A Glutaminyl cyclase; bet 99.2 2.6E-09 9E-14 91.8 20.1 186 25-263 46-253 (268)
128 3sjl_D Methylamine dehydrogena 99.2 5.2E-09 1.8E-13 95.8 23.3 148 40-225 39-212 (386)
129 3mbr_X Glutamine cyclotransfer 99.2 5.1E-09 1.7E-13 89.3 21.3 187 25-263 12-222 (243)
130 3nol_A Glutamine cyclotransfer 99.2 3E-09 1E-13 91.5 19.9 163 23-230 76-254 (262)
131 4gqb_B Methylosome protein 50; 99.2 1.4E-08 4.7E-13 92.3 25.4 230 98-358 85-330 (344)
132 1vyh_C Platelet-activating fac 99.2 3.8E-08 1.3E-12 91.5 28.7 154 36-233 111-266 (410)
133 1fwx_A Nitrous oxide reductase 99.2 9.5E-10 3.3E-14 105.0 17.1 209 35-268 87-353 (595)
134 3mbr_X Glutamine cyclotransfer 99.2 7.8E-09 2.7E-13 88.1 21.0 164 23-231 54-234 (243)
135 3nok_A Glutaminyl cyclase; bet 99.2 5.3E-09 1.8E-13 90.0 19.9 162 23-230 86-264 (268)
136 3das_A Putative oxidoreductase 99.2 4.5E-08 1.6E-12 88.3 27.1 156 93-267 29-223 (347)
137 3qqz_A Putative uncharacterize 99.2 1.1E-07 3.6E-12 82.2 28.3 202 94-358 25-252 (255)
138 1mda_H Methylamine dehydrogena 99.2 1.2E-09 4.1E-14 99.9 17.0 236 24-290 58-356 (368)
139 1got_B GT-beta; complex (GTP-b 99.2 5.2E-08 1.8E-12 88.1 27.8 203 34-285 56-262 (340)
140 2ynn_A Coatomer subunit beta'; 99.1 3.8E-08 1.3E-12 87.5 26.0 216 34-298 14-235 (304)
141 2ecf_A Dipeptidyl peptidase IV 99.1 8.8E-09 3E-13 103.0 23.7 163 34-221 37-229 (741)
142 1pgu_A Actin interacting prote 99.1 5E-08 1.7E-12 94.8 28.5 279 33-358 18-327 (615)
143 2hqs_A Protein TOLB; TOLB, PAL 99.1 4.7E-08 1.6E-12 91.1 26.8 177 44-264 143-330 (415)
144 2g8s_A Glucose/sorbosone dehyd 99.1 4.7E-09 1.6E-13 95.8 19.3 208 33-264 65-341 (353)
145 1r5m_A SIR4-interacting protei 99.1 1.7E-07 6E-12 86.3 30.3 277 34-358 46-360 (425)
146 1got_B GT-beta; complex (GTP-b 99.1 9.5E-08 3.3E-12 86.3 27.7 189 35-267 99-292 (340)
147 3sjl_D Methylamine dehydrogena 99.1 1.8E-08 6.3E-13 92.2 22.8 198 25-265 72-300 (386)
148 3fm0_A Protein CIAO1; WDR39,SG 99.1 1.7E-07 5.8E-12 84.9 29.1 196 35-268 18-217 (345)
149 1r5m_A SIR4-interacting protei 99.1 8.5E-08 2.9E-12 88.4 27.0 217 35-300 110-339 (425)
150 2pm9_A Protein WEB1, protein t 99.1 2.8E-08 9.7E-13 91.7 23.3 222 35-299 69-313 (416)
151 2mad_H Methylamine dehydrogena 99.1 6.5E-08 2.2E-12 88.9 25.3 200 34-286 125-356 (373)
152 1erj_A Transcriptional repress 99.1 1.1E-07 3.7E-12 87.8 26.6 152 37-232 127-287 (393)
153 4aez_A CDC20, WD repeat-contai 99.1 8.1E-07 2.8E-11 82.0 32.1 183 34-264 135-322 (401)
154 1fwx_A Nitrous oxide reductase 99.1 1.6E-08 5.4E-13 96.6 20.5 194 28-265 128-407 (595)
155 3frx_A Guanine nucleotide-bind 99.0 3.9E-07 1.3E-11 81.6 28.4 209 35-287 19-234 (319)
156 3q6k_A 43.2 kDa salivary prote 99.0 4.7E-07 1.6E-11 82.4 28.7 200 32-266 24-296 (381)
157 3dwl_C Actin-related protein 2 99.0 7E-09 2.4E-13 94.7 17.0 195 35-268 13-228 (377)
158 3jrp_A Fusion protein of prote 99.0 3.2E-07 1.1E-11 83.2 27.9 196 34-268 12-232 (379)
159 3mkq_A Coatomer beta'-subunit; 99.0 9E-08 3.1E-12 96.5 26.5 216 34-299 14-236 (814)
160 2p9w_A MAL S 1 allergenic prot 99.0 9.2E-09 3.2E-13 91.3 16.7 165 94-268 11-207 (334)
161 3vl1_A 26S proteasome regulato 99.0 1.9E-07 6.5E-12 86.4 26.5 183 40-267 104-313 (420)
162 2wg3_C Hedgehog-interacting pr 99.0 3E-08 1E-12 93.3 21.1 179 26-220 7-242 (463)
163 4ery_A WD repeat-containing pr 99.0 8.5E-07 2.9E-11 78.7 29.8 157 34-233 66-224 (312)
164 1erj_A Transcriptional repress 99.0 1.1E-06 3.9E-11 80.9 31.6 204 35-267 66-278 (393)
165 4h5i_A Guanine nucleotide-exch 99.0 4E-08 1.4E-12 89.9 21.1 190 37-267 137-334 (365)
166 2pm9_A Protein WEB1, protein t 99.0 1.7E-07 6E-12 86.4 25.6 273 34-358 13-336 (416)
167 1vyh_C Platelet-activating fac 99.0 1.6E-07 5.6E-12 87.2 25.2 188 35-267 152-360 (410)
168 3zwl_B Eukaryotic translation 99.0 1.4E-07 4.7E-12 85.2 24.0 189 34-265 75-279 (369)
169 2ojh_A Uncharacterized protein 99.0 1.5E-07 5E-12 82.1 23.4 190 34-265 85-292 (297)
170 1yfq_A Cell cycle arrest prote 99.0 9.3E-08 3.2E-12 85.7 22.4 188 34-267 12-216 (342)
171 2z3z_A Dipeptidyl aminopeptida 99.0 1.2E-07 4.1E-12 94.2 25.3 224 34-287 82-350 (706)
172 2xzm_R RACK1; ribosome, transl 99.0 5.8E-07 2E-11 81.2 27.7 189 36-267 79-277 (343)
173 2ecf_A Dipeptidyl peptidase IV 99.0 1E-07 3.4E-12 95.3 24.7 206 36-267 111-358 (741)
174 4a11_B DNA excision repair pro 99.0 9.5E-07 3.3E-11 80.9 29.5 204 34-268 44-268 (408)
175 1nr0_A Actin interacting prote 99.0 1.1E-06 3.8E-11 85.9 31.4 81 35-129 192-273 (611)
176 3frx_A Guanine nucleotide-bind 99.0 7.7E-07 2.6E-11 79.6 27.5 186 35-267 67-259 (319)
177 4g56_B MGC81050 protein; prote 99.0 6E-08 2.1E-12 88.4 20.3 207 36-287 97-308 (357)
178 2ojh_A Uncharacterized protein 99.0 9.1E-08 3.1E-12 83.4 20.7 187 34-264 42-236 (297)
179 1nr0_A Actin interacting prote 99.0 4.4E-07 1.5E-11 88.8 27.6 209 33-287 18-228 (611)
180 3vl1_A 26S proteasome regulato 99.0 6.4E-07 2.2E-11 82.8 27.0 154 36-233 59-213 (420)
181 1sq9_A Antiviral protein SKI8; 99.0 7.7E-07 2.6E-11 81.5 27.3 212 35-289 18-276 (397)
182 2pbi_B Guanine nucleotide-bind 99.0 2.4E-06 8.2E-11 77.6 30.2 188 34-268 65-263 (354)
183 3odt_A Protein DOA1; ubiquitin 98.9 2.7E-06 9.3E-11 74.8 29.1 265 33-358 18-295 (313)
184 2z3z_A Dipeptidyl aminopeptida 98.9 1.7E-07 5.8E-12 93.1 23.4 190 36-263 183-418 (706)
185 1k8k_C P40, ARP2/3 complex 41 98.9 2.2E-07 7.5E-12 84.2 22.3 192 34-264 53-263 (372)
186 4aez_A CDC20, WD repeat-contai 98.9 6.8E-07 2.3E-11 82.5 25.9 193 35-267 178-371 (401)
187 2ynn_A Coatomer subunit beta'; 98.9 1.2E-06 4.3E-11 77.6 25.8 203 36-288 58-267 (304)
188 3i2n_A WD repeat-containing pr 98.9 1.3E-06 4.5E-11 78.4 26.1 195 27-267 12-234 (357)
189 3fm0_A Protein CIAO1; WDR39,SG 98.9 1.2E-06 4.1E-11 79.2 25.8 159 35-231 63-224 (345)
190 3ei3_B DNA damage-binding prot 98.9 2.3E-06 7.7E-11 78.2 27.8 157 35-233 120-283 (383)
191 2xzm_R RACK1; ribosome, transl 98.9 5.1E-06 1.7E-10 74.9 29.7 194 36-268 24-236 (343)
192 3iz6_a 40S ribosomal protein R 98.9 1.4E-06 4.8E-11 79.9 26.0 206 34-285 67-285 (380)
193 3sre_A PON1, serum paraoxonase 98.9 7.3E-07 2.5E-11 80.7 23.5 150 98-267 52-243 (355)
194 2vdu_B TRNA (guanine-N(7)-)-me 98.9 1.2E-06 4E-11 82.3 25.7 159 35-233 104-272 (450)
195 3q7m_A Lipoprotein YFGL, BAMB; 98.9 2.1E-06 7.3E-11 78.4 26.8 261 44-358 53-336 (376)
196 3o4h_A Acylamino-acid-releasin 98.9 1.4E-07 4.9E-12 91.6 19.8 185 35-268 66-268 (582)
197 3pe7_A Oligogalacturonate lyas 98.9 1.9E-07 6.4E-12 85.5 19.6 180 38-258 85-302 (388)
198 2aq5_A Coronin-1A; WD40 repeat 98.9 9.2E-07 3.1E-11 81.6 24.3 198 36-267 84-290 (402)
199 2aq5_A Coronin-1A; WD40 repeat 98.9 3.9E-07 1.3E-11 84.1 21.7 190 34-261 132-329 (402)
200 3sfz_A APAF-1, apoptotic pepti 98.9 4.8E-06 1.7E-10 88.0 32.7 156 35-232 617-774 (1249)
201 2xyi_A Probable histone-bindin 98.9 8.4E-07 2.9E-11 82.8 24.0 205 34-268 129-345 (430)
202 3q7m_A Lipoprotein YFGL, BAMB; 98.8 4.7E-06 1.6E-10 76.1 28.3 251 43-356 102-375 (376)
203 3q6k_A 43.2 kDa salivary prote 98.8 2.9E-06 9.8E-11 77.2 26.1 201 32-265 85-343 (381)
204 3k26_A Polycomb protein EED; W 98.8 4.5E-06 1.5E-10 75.1 27.8 166 28-232 13-192 (366)
205 3pe7_A Oligogalacturonate lyas 98.8 1.4E-06 4.9E-11 79.5 24.7 200 39-265 41-258 (388)
206 2pbi_B Guanine nucleotide-bind 98.8 1.2E-06 4.3E-11 79.5 24.1 185 37-266 158-347 (354)
207 1mda_H Methylamine dehydrogena 98.8 1.9E-07 6.5E-12 85.3 18.0 213 23-256 107-367 (368)
208 3i2n_A WD repeat-containing pr 98.8 4.7E-07 1.6E-11 81.4 20.7 193 34-267 66-282 (357)
209 3k26_A Polycomb protein EED; W 98.8 9.4E-07 3.2E-11 79.6 22.6 191 35-267 71-309 (366)
210 3mkq_A Coatomer beta'-subunit; 98.8 9.9E-07 3.4E-11 88.9 24.8 207 34-290 56-269 (814)
211 2vdu_B TRNA (guanine-N(7)-)-me 98.8 1.9E-06 6.6E-11 80.8 25.0 163 97-288 104-279 (450)
212 3dm0_A Maltose-binding peripla 98.8 1.3E-05 4.4E-10 79.6 32.1 190 36-267 433-624 (694)
213 1cru_A Protein (soluble quinop 98.8 2.2E-07 7.7E-12 87.4 18.1 166 94-266 25-248 (454)
214 2hes_X YDR267CP; beta-propelle 98.8 1.6E-05 5.4E-10 71.3 29.5 191 35-267 16-221 (330)
215 3sfz_A APAF-1, apoptotic pepti 98.8 3.4E-07 1.2E-11 96.9 21.2 200 35-286 963-1164(1249)
216 3v7d_B Cell division control p 98.8 1.2E-05 4.2E-10 75.3 29.9 205 42-299 129-360 (464)
217 1xfd_A DIP, dipeptidyl aminope 98.8 1.1E-06 3.7E-11 87.4 23.8 207 35-262 62-323 (723)
218 3f3f_A Nucleoporin SEH1; struc 98.8 3.6E-06 1.2E-10 74.8 24.7 196 34-268 12-241 (351)
219 3jro_A Fusion protein of prote 98.8 1.3E-06 4.5E-11 87.7 23.6 195 35-268 11-230 (753)
220 1sq9_A Antiviral protein SKI8; 98.8 2.2E-06 7.5E-11 78.4 23.1 190 35-267 64-313 (397)
221 4aow_A Guanine nucleotide-bind 98.8 1.4E-05 4.9E-10 71.1 28.0 194 35-268 40-238 (340)
222 3mmy_A MRNA export factor; mRN 98.8 2.9E-06 9.9E-11 76.4 23.6 249 33-322 39-334 (368)
223 2xyi_A Probable histone-bindin 98.8 5.6E-07 1.9E-11 84.0 19.2 197 34-267 182-401 (430)
224 3dwl_C Actin-related protein 2 98.8 7.6E-08 2.6E-12 87.8 12.8 192 35-267 57-273 (377)
225 1k32_A Tricorn protease; prote 98.8 2.8E-06 9.7E-11 88.4 26.2 181 35-264 297-491 (1045)
226 3dw8_B Serine/threonine-protei 98.7 2.9E-06 9.9E-11 78.9 23.8 202 35-265 30-305 (447)
227 2pm7_B Protein transport prote 98.7 9.3E-06 3.2E-10 71.6 25.7 195 35-267 11-229 (297)
228 3jrp_A Fusion protein of prote 98.7 1.5E-06 5.1E-11 78.7 21.0 192 35-267 57-278 (379)
229 3s25_A Hypothetical 7-bladed b 98.7 4E-06 1.4E-10 74.4 22.7 178 101-358 109-292 (302)
230 3azo_A Aminopeptidase; POP fam 98.7 9.5E-06 3.3E-10 79.8 27.8 155 105-267 88-263 (662)
231 4h5i_A Guanine nucleotide-exch 98.7 1.7E-06 5.7E-11 79.0 20.7 159 35-233 178-344 (365)
232 2j04_A TAU60, YPL007P, hypothe 98.7 1.3E-05 4.4E-10 76.6 26.7 212 35-280 17-253 (588)
233 3odt_A Protein DOA1; ubiquitin 98.7 1.2E-05 4E-10 70.7 25.2 202 34-289 60-264 (313)
234 3iz6_a 40S ribosomal protein R 98.7 1.1E-05 3.7E-10 73.9 25.4 200 35-268 110-321 (380)
235 3lrv_A PRE-mRNA-splicing facto 98.7 6.7E-05 2.3E-09 67.4 29.2 145 97-265 127-280 (343)
236 3bg1_A Protein SEC13 homolog; 98.7 3.2E-06 1.1E-10 75.4 20.0 192 36-267 16-238 (316)
237 4e54_B DNA damage-binding prot 98.6 3.1E-06 1.1E-10 79.1 20.7 156 36-233 167-328 (435)
238 1yfq_A Cell cycle arrest prote 98.6 3.2E-06 1.1E-10 75.5 20.1 203 34-289 57-291 (342)
239 1xfd_A DIP, dipeptidyl aminope 98.6 2.6E-06 9E-11 84.7 21.3 147 35-220 18-192 (723)
240 4aow_A Guanine nucleotide-bind 98.6 8.4E-05 2.9E-09 66.0 29.0 187 35-265 88-276 (340)
241 3dm0_A Maltose-binding peripla 98.6 2.5E-05 8.5E-10 77.5 27.8 211 35-289 384-601 (694)
242 1z68_A Fibroblast activation p 98.6 2.5E-06 8.5E-11 84.9 20.6 140 36-220 18-188 (719)
243 2oaj_A Protein SNI1; WD40 repe 98.6 3.8E-06 1.3E-10 86.0 22.0 198 34-284 18-246 (902)
244 4a5s_A Dipeptidyl peptidase 4 98.6 1.9E-05 6.6E-10 79.0 26.6 142 37-219 20-189 (740)
245 1pgu_A Actin interacting prote 98.6 1.3E-05 4.6E-10 77.5 24.5 204 36-289 67-292 (615)
246 4ggc_A P55CDC, cell division c 98.6 0.00027 9.3E-09 62.0 32.5 152 37-233 29-182 (318)
247 3c5m_A Oligogalacturonate lyas 98.6 4.9E-06 1.7E-10 76.0 19.7 190 36-265 38-258 (396)
248 4gga_A P55CDC, cell division c 98.6 0.00019 6.4E-09 66.4 30.7 266 37-357 109-393 (420)
249 3dw8_B Serine/threonine-protei 98.6 1.9E-05 6.5E-10 73.3 23.5 166 33-233 177-374 (447)
250 3s25_A Hypothetical 7-bladed b 98.6 2.7E-05 9.3E-10 69.0 23.0 178 44-283 24-218 (302)
251 2pm7_B Protein transport prote 98.6 1.5E-05 5.1E-10 70.3 21.3 190 37-267 57-276 (297)
252 3gre_A Serine/threonine-protei 98.5 1.3E-05 4.5E-10 74.5 21.6 171 25-232 55-245 (437)
253 2xdw_A Prolyl endopeptidase; a 98.5 2.9E-05 1E-09 77.2 25.3 214 37-290 128-378 (710)
254 1k32_A Tricorn protease; prote 98.5 1.5E-05 5E-10 83.0 23.0 187 36-261 247-436 (1045)
255 4a11_B DNA excision repair pro 98.5 4.2E-05 1.4E-09 69.8 23.7 218 35-301 101-344 (408)
256 3lrv_A PRE-mRNA-splicing facto 98.5 7.3E-05 2.5E-09 67.2 24.8 184 43-266 46-235 (343)
257 2ovr_B FBW7, F-BOX/WD repeat p 98.5 0.00033 1.1E-08 65.2 30.0 258 40-358 124-390 (445)
258 3v7d_B Cell division control p 98.5 0.00059 2E-08 63.7 31.5 190 34-267 163-372 (464)
259 2j04_A TAU60, YPL007P, hypothe 98.5 6.5E-06 2.2E-10 78.6 17.5 149 35-229 131-294 (588)
260 3jro_A Fusion protein of prote 98.4 2E-05 6.7E-10 79.1 21.5 195 35-268 55-277 (753)
261 3azo_A Aminopeptidase; POP fam 98.4 1.8E-05 6.3E-10 77.8 20.8 188 43-265 88-313 (662)
262 3o4h_A Acylamino-acid-releasin 98.4 5.3E-06 1.8E-10 80.5 16.7 175 35-264 111-300 (582)
263 3f3f_A Nucleoporin SEH1; struc 98.4 4.6E-05 1.6E-09 67.5 21.7 163 34-232 58-249 (351)
264 3c5m_A Oligogalacturonate lyas 98.4 6.5E-06 2.2E-10 75.1 15.9 198 38-263 85-300 (396)
265 4gga_A P55CDC, cell division c 98.4 0.00021 7.2E-09 66.1 25.9 203 36-290 150-363 (420)
266 3bg1_A Protein SEC13 homolog; 98.4 2.9E-05 9.8E-10 69.1 18.5 194 36-267 60-284 (316)
267 2ovr_B FBW7, F-BOX/WD repeat p 98.4 0.0018 6E-08 60.2 31.4 262 36-358 162-441 (445)
268 2bkl_A Prolyl endopeptidase; m 98.3 5.8E-05 2E-09 74.9 20.7 211 37-290 124-360 (695)
269 4ggc_A P55CDC, cell division c 98.3 9.2E-05 3.1E-09 65.1 20.0 215 36-267 70-306 (318)
270 3mmy_A MRNA export factor; mRN 98.3 9.3E-05 3.2E-09 66.3 20.3 206 34-265 87-335 (368)
271 2hes_X YDR267CP; beta-propelle 98.3 0.00064 2.2E-08 60.6 25.7 152 96-268 15-176 (330)
272 4a5s_A Dipeptidyl peptidase 4 98.3 0.00035 1.2E-08 69.8 26.3 176 37-234 65-296 (740)
273 3amr_A 3-phytase; beta-propell 98.3 6.1E-05 2.1E-09 67.4 18.3 198 43-287 38-271 (355)
274 2j04_B YDR362CP, TAU91; beta p 98.3 0.00049 1.7E-08 65.9 25.5 204 35-282 209-429 (524)
275 3gre_A Serine/threonine-protei 98.3 0.00019 6.6E-09 66.5 22.2 168 35-233 113-293 (437)
276 3amr_A 3-phytase; beta-propell 98.3 0.00019 6.6E-09 64.2 20.8 140 107-267 39-202 (355)
277 1p22_A F-BOX/WD-repeat protein 98.2 0.0017 5.7E-08 60.2 28.1 202 40-299 138-344 (435)
278 2j04_B YDR362CP, TAU91; beta p 98.2 2.1E-05 7.1E-10 75.5 15.3 154 36-232 269-428 (524)
279 3vu4_A KMHSV2; beta-propeller 98.2 0.00034 1.2E-08 63.3 22.4 202 34-267 20-262 (355)
280 2gop_A Trilobed protease; beta 98.2 0.00086 2.9E-08 59.9 24.6 180 35-266 60-282 (347)
281 4a9v_A PHOX; hydrolase, beta-p 98.2 2.1E-05 7.2E-10 74.6 13.7 117 97-220 385-550 (592)
282 1z68_A Fibroblast activation p 98.2 0.00014 4.8E-09 72.2 20.4 172 36-229 62-284 (719)
283 2ad6_A Methanol dehydrogenase 98.2 0.0028 9.7E-08 61.2 28.7 173 39-233 111-336 (571)
284 2oaj_A Protein SNI1; WD40 repe 98.1 0.00018 6.2E-09 73.6 20.5 156 36-233 61-243 (902)
285 1yr2_A Prolyl oligopeptidase; 98.1 0.00027 9.3E-09 70.6 21.4 210 37-289 166-403 (741)
286 3b7f_A Glycosyl hydrolase, BNR 98.1 0.00013 4.5E-09 67.1 17.0 148 41-229 19-205 (394)
287 1kb0_A Quinohemoprotein alcoho 98.1 0.0023 8E-08 63.2 26.8 178 38-233 123-347 (677)
288 3iuj_A Prolyl endopeptidase; h 98.1 0.00069 2.4E-08 67.1 22.6 210 37-289 132-367 (693)
289 2ad6_A Methanol dehydrogenase 98.1 0.0053 1.8E-07 59.3 28.1 125 44-196 62-191 (571)
290 4gq1_A NUP37; propeller, trans 98.0 0.00076 2.6E-08 61.8 21.1 191 37-267 140-381 (393)
291 3vu4_A KMHSV2; beta-propeller 98.0 0.0023 7.8E-08 57.7 22.9 73 142-233 196-272 (355)
292 2oit_A Nucleoporin 214KDA; NH2 97.9 0.0014 4.7E-08 61.1 20.4 158 35-232 94-278 (434)
293 1p22_A F-BOX/WD-repeat protein 97.9 0.0047 1.6E-07 57.1 24.0 179 37-267 177-356 (435)
294 4a9v_A PHOX; hydrolase, beta-p 97.9 0.0003 1E-08 66.8 15.1 123 32-160 382-549 (592)
295 2w18_A PALB2, fancn, partner a 97.8 0.0038 1.3E-07 56.0 20.4 152 38-230 183-355 (356)
296 1w6s_A Methanol dehydrogenase 97.8 0.028 9.7E-07 54.4 30.8 177 37-233 109-343 (599)
297 2wg3_C Hedgehog-interacting pr 97.8 0.0022 7.5E-08 60.2 19.9 157 97-265 140-355 (463)
298 2w18_A PALB2, fancn, partner a 97.8 0.013 4.3E-07 52.5 23.6 158 100-267 183-348 (356)
299 1kb0_A Quinohemoprotein alcoho 97.8 0.0033 1.1E-07 62.1 21.2 82 180-265 456-539 (677)
300 1yiq_A Quinohemoprotein alcoho 97.8 0.024 8.1E-07 56.1 27.3 32 100-131 239-289 (689)
301 3b7f_A Glycosyl hydrolase, BNR 97.7 0.0034 1.2E-07 57.5 19.9 152 38-219 119-297 (394)
302 4gq1_A NUP37; propeller, trans 97.7 0.022 7.6E-07 51.9 25.1 151 44-232 100-286 (393)
303 1kv9_A Type II quinohemoprotei 97.7 0.041 1.4E-06 54.2 28.5 140 38-197 112-286 (668)
304 2oit_A Nucleoporin 214KDA; NH2 97.7 0.0019 6.6E-08 60.1 17.7 167 98-286 39-228 (434)
305 2xdw_A Prolyl endopeptidase; a 97.7 0.0074 2.5E-07 59.8 22.8 147 105-264 81-252 (710)
306 1tl2_A L10, protein (tachylect 97.7 0.0019 6.5E-08 53.7 15.2 115 27-160 34-152 (236)
307 2bkl_A Prolyl endopeptidase; m 97.6 0.0051 1.8E-07 60.8 20.5 147 105-265 77-247 (695)
308 2gop_A Trilobed protease; beta 97.6 0.0016 5.3E-08 58.1 15.4 160 34-229 15-206 (347)
309 1flg_A Protein (quinoprotein e 97.6 0.065 2.2E-06 51.8 28.0 39 306-346 507-546 (582)
310 2hz6_A Endoplasmic reticulum t 97.5 0.00018 6.1E-09 65.7 6.9 187 45-289 9-201 (369)
311 1yiq_A Quinohemoprotein alcoho 97.5 0.025 8.5E-07 55.9 22.6 82 180-266 454-538 (689)
312 2xbg_A YCF48-like protein; pho 97.4 0.058 2E-06 47.9 27.4 178 37-265 83-269 (327)
313 1flg_A Protein (quinoprotein e 97.4 0.045 1.5E-06 52.9 23.6 82 180-266 465-549 (582)
314 1kv9_A Type II quinohemoprotei 97.4 0.041 1.4E-06 54.2 23.4 81 181-265 438-520 (668)
315 1yr2_A Prolyl oligopeptidase; 97.4 0.017 5.8E-07 57.6 20.8 146 105-264 116-287 (741)
316 1w6s_A Methanol dehydrogenase 97.3 0.089 3E-06 51.0 24.4 81 180-266 452-536 (599)
317 3zwu_A Alkaline phosphatase PH 97.2 0.0063 2.1E-07 58.6 14.1 116 97-218 385-548 (592)
318 1tl2_A L10, protein (tachylect 97.1 0.011 3.9E-07 49.1 13.3 136 97-263 42-199 (236)
319 3zwu_A Alkaline phosphatase PH 96.9 0.025 8.6E-07 54.4 15.2 123 32-159 382-548 (592)
320 1k3i_A Galactose oxidase precu 96.6 0.36 1.2E-05 47.2 21.7 103 35-159 187-303 (656)
321 3iuj_A Prolyl endopeptidase; h 96.5 0.21 7.1E-06 49.3 19.4 108 143-264 130-253 (693)
322 2xbg_A YCF48-like protein; pho 96.2 0.62 2.1E-05 41.1 25.6 193 27-265 29-224 (327)
323 1k3i_A Galactose oxidase precu 95.8 1.5 5.2E-05 42.7 21.3 75 38-132 247-329 (656)
324 2xe4_A Oligopeptidase B; hydro 95.6 1.4 4.9E-05 43.8 20.5 107 143-264 175-290 (751)
325 1xip_A Nucleoporin NUP159; bet 95.2 0.93 3.2E-05 41.2 16.4 134 27-217 84-230 (388)
326 1zgk_A Kelch-like ECH-associat 95.1 1.5 5.1E-05 38.0 23.1 138 55-233 39-194 (308)
327 2xe4_A Oligopeptidase B; hydro 95.1 0.21 7.2E-06 49.8 12.7 153 37-232 177-354 (751)
328 3ii7_A Kelch-like protein 7; p 94.8 1.8 6.1E-05 37.3 20.2 137 55-232 118-272 (306)
329 2hz6_A Endoplasmic reticulum t 94.7 0.026 8.7E-07 51.2 4.6 52 180-233 18-69 (369)
330 3sbq_A Nitrous-oxide reductase 94.6 0.21 7.3E-06 47.2 10.3 87 182-268 299-400 (638)
331 4asc_A Kelch repeat and BTB do 94.4 2.1 7.1E-05 37.2 16.2 105 55-197 117-228 (315)
332 2uvk_A YJHT; unknown function, 94.3 2.7 9.1E-05 37.2 17.8 92 44-159 19-124 (357)
333 2woz_A Kelch repeat and BTB do 94.2 2.6 8.9E-05 36.6 17.1 104 55-196 127-237 (318)
334 1zgk_A Kelch-like ECH-associat 93.8 2.9 0.0001 36.1 17.6 138 55-233 90-241 (308)
335 4asc_A Kelch repeat and BTB do 93.4 3.6 0.00012 35.6 24.3 142 55-233 13-175 (315)
336 2xn4_A Kelch-like protein 2; s 93.1 3.8 0.00013 35.2 21.2 140 55-233 77-230 (302)
337 2vpj_A Kelch-like protein 12; 93.0 3.9 0.00013 35.0 21.2 105 55-197 128-238 (301)
338 1xip_A Nucleoporin NUP159; bet 92.6 2.3 7.7E-05 38.6 13.4 155 34-233 38-192 (388)
339 3ii7_A Kelch-like protein 7; p 92.4 4.8 0.00016 34.5 25.5 139 55-233 24-179 (306)
340 2zwa_A Leucine carboxyl methyl 92.2 5.2 0.00018 39.3 16.5 125 37-192 443-579 (695)
341 2vpj_A Kelch-like protein 12; 92.1 5.2 0.00018 34.2 25.6 138 55-233 31-185 (301)
342 3sbq_A Nitrous-oxide reductase 91.9 1.5 5.3E-05 41.5 11.4 107 142-266 323-455 (638)
343 3a0f_A Xyloglucanase; beta-pro 91.4 12 0.00042 37.1 25.6 166 34-227 21-208 (763)
344 1sqj_A OXG-RCBH, oligoxylogluc 91.0 9.4 0.00032 38.1 17.1 162 34-227 15-196 (789)
345 2zwa_A Leucine carboxyl methyl 90.8 13 0.00045 36.4 22.3 160 43-234 396-579 (695)
346 2cn3_A Xyloglucanase, beta-1,4 89.9 16 0.00055 36.1 26.9 111 35-160 24-151 (737)
347 2xn4_A Kelch-like protein 2; s 89.8 8.7 0.0003 32.8 26.9 138 55-233 30-183 (302)
348 2woz_A Kelch repeat and BTB do 88.4 12 0.00039 32.3 25.2 141 55-233 24-185 (318)
349 2uvk_A YJHT; unknown function, 87.7 14 0.00047 32.4 18.9 154 55-234 168-344 (357)
350 2be1_A Serine/threonine-protei 85.0 20 0.00068 31.7 15.1 25 107-131 10-34 (339)
351 2be1_A Serine/threonine-protei 84.2 5.8 0.0002 35.1 9.5 23 47-69 12-34 (339)
352 3a0f_A Xyloglucanase; beta-pro 81.2 36 0.0012 33.7 15.1 161 37-230 591-760 (763)
353 2cn3_A Xyloglucanase, beta-1,4 79.6 28 0.00095 34.3 13.6 120 97-227 24-159 (737)
354 1sqj_A OXG-RCBH, oligoxylogluc 78.8 30 0.001 34.4 13.6 119 96-227 15-147 (789)
355 3f6k_A Sortilin; protein sorti 59.5 75 0.0026 31.0 11.2 99 116-227 64-164 (685)
356 1z65_A PRPLP, prion-like prote 55.0 8.7 0.0003 20.1 2.0 19 1-19 1-19 (30)
357 3f6k_A Sortilin; protein sorti 40.3 2.7E+02 0.0092 27.1 20.5 91 48-159 58-156 (685)
358 1ew4_A CYAY protein; friedreic 33.7 68 0.0023 22.8 4.7 22 107-129 57-78 (106)
359 3hx6_A Type 4 fimbrial biogene 32.0 3.3E+02 0.011 25.7 11.5 20 108-127 266-285 (570)
360 3s9j_A Member of DUF4221 famil 28.1 91 0.0031 27.8 5.7 76 209-289 36-118 (369)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=100.00 E-value=7e-31 Score=238.38 Aligned_cols=299 Identities=36% Similarity=0.670 Sum_probs=216.2
Q ss_pred EEEee-CCCCCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCC--CCCCCcccccccccccCCcceEEE
Q 018242 26 VQYQI-EGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRD--GCEGAYEYDHAAKEHICGRPLGLC 102 (359)
Q Consensus 26 ~~~~~-~~~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~gi~ 102 (359)
.++.. +++..|++++++++|+++|++..+++|+++++++++++.+........ .+.+... .........|.||+
T Consensus 10 ~~i~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~p~gi~ 86 (322)
T 2fp8_A 10 KEILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTD---AEKRPLCGRTYDIS 86 (322)
T ss_dssp CEEEEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCC---GGGHHHHCCEEEEE
T ss_pred ceeecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccc---hhccccCCCCceEE
Confidence 34555 457899999999999989999999999999998877776653221100 0000000 00111234689999
Q ss_pred EecCCCeEEEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeC-CCCEEEEEeCCCccccccceeeeeecCCCc
Q 018242 103 FNKTNGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQ-STGIIYFTDSSSQFQRRNHISVILSGDKTG 181 (359)
Q Consensus 103 ~~~~~g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~-~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g 181 (359)
+++++++|||++..++|.++++++++++.+.....+.+...|+++++++ +|+ +||++....+....+...+......+
T Consensus 87 ~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g 165 (322)
T 2fp8_A 87 YNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTG 165 (322)
T ss_dssp EETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCE
T ss_pred EcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCc
Confidence 9975899999998888999999887766554433334456799999999 999 99998764322111111111123347
Q ss_pred eEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEE
Q 018242 182 RLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWV 261 (359)
Q Consensus 182 ~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv 261 (359)
.|+++|+++++++.+......|++|++++|++.+|++++.+++|++|++++...+..+.+...++ |++|++|++|+||+
T Consensus 166 ~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~v 244 (322)
T 2fp8_A 166 RLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWV 244 (322)
T ss_dssp EEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEE
T ss_pred eEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEE
Confidence 89999998887776666677899999999999999999999999999987655555555555666 99999999999999
Q ss_pred EEecCCCccccccccCCccceeeecCCccceeeeeecccccCcceEEEEECCCCCEEEEEEccCCceeeceEEEEEeCCE
Q 018242 262 GIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEKDGN 341 (359)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~ 341 (359)
++...+.. .+ .. ... ..+.+++++|+.+..+..++|.....++.+...+++
T Consensus 245 a~~~~~~~-------~~----------~~-----------~~~-~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~ 295 (322)
T 2fp8_A 245 SSSEELDG-------NM----------HG-----------RVD-PKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGL 295 (322)
T ss_dssp EEEEETTS-------ST----------TS-----------CEE-EEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTE
T ss_pred EecCcccc-------cc----------cC-----------CCc-cEEEEECCCCCEEEEEECCCCCccccceEEEEeCCE
Confidence 99864321 00 00 011 578999999999999988777655667767667999
Q ss_pred EEEecCCCCeEEEEcCC
Q 018242 342 LWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 342 l~ig~~~~~~l~~~~~~ 358 (359)
||+++..+++|.+++++
T Consensus 296 L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 296 LYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEEECSSCSEEEEEEC-
T ss_pred EEEeecCCCceEEEecc
Confidence 99999999999999875
No 2
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.96 E-value=1.2e-26 Score=210.83 Aligned_cols=283 Identities=19% Similarity=0.248 Sum_probs=196.2
Q ss_pred EEeeCC-CCCCceEEEccCCCeeEEec-------------CCCEEEEEEcCC--cceEEEeecCCCCCCCCCCccccccc
Q 018242 27 QYQIEG-AIGPESLAFDALGEGPYTGV-------------SDGRIIKWHQDQ--RRWLHFARTSPNRDGCEGAYEYDHAA 90 (359)
Q Consensus 27 ~~~~~~-~~~p~~i~~~~~G~~l~~~~-------------~~~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (359)
+..+++ ..+||+|+++++|. +|+++ ..|.|+++|+++ .+.+.+..... .
T Consensus 42 C~~i~~~~~G~EDi~~~~~G~-~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~--------------~ 106 (355)
T 3sre_A 42 CNLVKGIDNGSEDLEILPNGL-AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGN--------------T 106 (355)
T ss_dssp EEECTTCCSCCCEEEECTTSE-EEEEECCC-----------CCEEEEEETTSSSCCEEECEEECS--------------S
T ss_pred CEEeCCCCCCcceeEEcCCCe-EEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCC--------------C
Confidence 344555 57999999999998 78776 578999999874 33333321100 0
Q ss_pred ccccCCcceEEEEecC-CC--eEEEEeCCC-----cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCC
Q 018242 91 KEHICGRPLGLCFNKT-NG--DLYIADAYF-----GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSS 162 (359)
Q Consensus 91 ~~~~~~~p~gi~~~~~-~g--~l~v~~~~~-----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~ 162 (359)
+......|+||.+.++ ++ +|||++... +|++++++++..+.+ ....+.++..||+++++++|+ +|+++..
T Consensus 107 ~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~-~~~~g~~~~~pND~~v~~~G~-fyvt~~~ 184 (355)
T 3sre_A 107 LDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHL-KTIRHKLLPSVNDIVAVGPEH-FYATNDH 184 (355)
T ss_dssp CCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEE-EEECCTTCSSEEEEEEEETTE-EEEEESC
T ss_pred CCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEE-eccccCCCCCCceEEEeCCCC-EEecCCc
Confidence 1223457999998663 34 699998763 388888887765544 444556788999999999999 9999764
Q ss_pred Cccccccce-eeeeecCCCceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC-CCcceeE
Q 018242 163 SQFQRRNHI-SVILSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS-KAGTIEI 240 (359)
Q Consensus 163 ~~~~~~~~~-~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~-~~~~~~~ 240 (359)
. |....+. .+.......+.|+++++. +++.+..++..||||+++||++++|++++..++|++|+++.+ .....+.
T Consensus 185 ~-ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~ 261 (355)
T 3sre_A 185 Y-FIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRV 261 (355)
T ss_dssp S-CSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEE
T ss_pred E-eCCcccccchhhccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEE
Confidence 1 0000000 000112346789999984 566667778899999999999999999999999999999753 3444444
Q ss_pred eecCCCCCCceEECC-CCCEEEEEecCCCccccccccCCccceeeecCCccceeeeeecccccCcceEEEEEC----CCC
Q 018242 241 VAQLPGFPDNIKRSP-RGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRIS----EQG 315 (359)
Q Consensus 241 ~~~~~~~p~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g 315 (359)
+ ..++.|+|+++|+ +|++|+|...++.. +.++++.. +-+ ..+.++. .++
T Consensus 262 ~-~~~g~PDGi~vD~e~G~lwva~~~~g~~----v~~~~P~~------~~~---------------s~v~rI~~~~~~~~ 315 (355)
T 3sre_A 262 L-SFDTLVDNISVDPVTGDLWVGCHPNGMR----IFFYDAEN------PPG---------------SEVLRIQDILSEEP 315 (355)
T ss_dssp E-ECSSEEEEEEECTTTCCEEEEEESCHHH----HHSCCTTS------CCC---------------EEEEEEECTTSSSC
T ss_pred E-eCCCCCceEEEeCCCCcEEEEecCCceE----EEEECCCC------CCC---------------CEEEEEEccCCCCc
Confidence 5 5678899999999 59999987644322 44455441 000 2344443 456
Q ss_pred CEEEEEEccCCceeeceEEEEEeCCEEEEecCCCCeEEEEcC
Q 018242 316 NVLEILEEIGRKMWRSISEVEEKDGNLWIGSVNMPYAGLYNY 357 (359)
Q Consensus 316 ~~~~~~~~~~g~~~~~~~~~~~~~g~l~ig~~~~~~l~~~~~ 357 (359)
.+.+.|.+ +|..+...+.+...+|+||||+...+ +-.|++
T Consensus 316 ~v~~v~~d-dG~~l~~~T~a~~~~g~L~iGsv~~~-~l~c~~ 355 (355)
T 3sre_A 316 KVTVVYAE-NGTVLQGSTVAAVYKGKLLIGTVFHK-ALYCDL 355 (355)
T ss_dssp EEEEEEEE-CSSSCCSEEEEEEETTEEEEEESSSC-EEEEEC
T ss_pred EEEEEEEc-CCCEEEeeEEEEEECCEEEEEEcCCC-ceeccC
Confidence 67778877 89888888888888999999999888 555654
No 3
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.93 E-value=2.6e-23 Score=185.81 Aligned_cols=256 Identities=16% Similarity=0.204 Sum_probs=182.3
Q ss_pred EEEEeeCCCCCCceEEEccCCC-eeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEE
Q 018242 25 VVQYQIEGAIGPESLAFDALGE-GPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCF 103 (359)
Q Consensus 25 ~~~~~~~~~~~p~~i~~~~~G~-~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 103 (359)
+.++. .+...|++++++++|+ ++|++..+++|++||++++ .+.+. .....|.++++
T Consensus 20 ~~~l~-~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~---------------------~~~~~~~~l~~ 76 (296)
T 3e5z_A 20 ARRLA-DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEM---------------------HPSHHQNGHCL 76 (296)
T ss_dssp CEEEE-CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEE---------------------SSCSSEEEEEE
T ss_pred EEEEe-cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEE---------------------CCCCCcceeeE
Confidence 34444 5578999999999998 8899999999999999987 55542 22345889999
Q ss_pred ecCCCeEEEEeCC-CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCcc--ccccceeeeeecCCC
Q 018242 104 NKTNGDLYIADAY-FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQF--QRRNHISVILSGDKT 180 (359)
Q Consensus 104 ~~~~g~l~v~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~--~~~~~~~~~~~~~~~ 180 (359)
++ +|++|+++.. ++|.++++++++.+.+.......+...+++++++++|+ +|++++.... ....... ......
T Consensus 77 ~~-dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~--~~~~~~ 152 (296)
T 3e5z_A 77 NK-QGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGG--EMELPG 152 (296)
T ss_dssp CT-TCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCC--CCCSSS
T ss_pred CC-CCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccc--cccCCC
Confidence 99 8899999865 57999999888876654333333455789999999999 9998752100 0000000 000123
Q ss_pred ceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCC-CCC-cceeEeec-CCCCCCceEECCCC
Q 018242 181 GRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKT-SKA-GTIEIVAQ-LPGFPDNIKRSPRG 257 (359)
Q Consensus 181 g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~-~~~-~~~~~~~~-~~~~p~~i~~d~~G 257 (359)
+.|++++++ +++..+......|++++++||++.+ ++++..++|++|+++. ... ...+.+ . ..+.|+++++|++|
T Consensus 153 ~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G 229 (296)
T 3e5z_A 153 RWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGG 229 (296)
T ss_dssp CEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTS
T ss_pred cEEEEECCC-CCEEEeecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCC
Confidence 589999998 6777776777889999999999977 9999999999999863 222 223444 4 45679999999999
Q ss_pred CEEEEEecCCCccccccccCCccceeeecCCccceeeeeecccccCcceEEEEECCCCCEEEEEEccCCceeeceEEEEE
Q 018242 258 GFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEE 337 (359)
Q Consensus 258 ~lwv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~ 337 (359)
+||+++ . ..+.+++++|+.+..+..+.+ +..+..
T Consensus 230 ~l~v~~-~----------------------------------------~~v~~~~~~g~~~~~~~~~~~-----~~~~~f 263 (296)
T 3e5z_A 230 LIWASA-G----------------------------------------DGVHVLTPDGDELGRVLTPQT-----TSNLCF 263 (296)
T ss_dssp CEEEEE-T----------------------------------------TEEEEECTTSCEEEEEECSSC-----CCEEEE
T ss_pred CEEEEc-C----------------------------------------CeEEEECCCCCEEEEEECCCC-----ceeEEE
Confidence 999998 3 346677877777777665443 222222
Q ss_pred ---eCCEEEEecCCCCeEEEEcCC
Q 018242 338 ---KDGNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 338 ---~~g~l~ig~~~~~~l~~~~~~ 358 (359)
+++.||+++. +.|.++++.
T Consensus 264 ~~~d~~~L~v~t~--~~l~~~~~~ 285 (296)
T 3e5z_A 264 GGPEGRTLYMTVS--TEFWSIETN 285 (296)
T ss_dssp ESTTSCEEEEEET--TEEEEEECS
T ss_pred ECCCCCEEEEEcC--CeEEEEEcc
Confidence 2457888874 467777664
No 4
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.93 E-value=2.1e-23 Score=187.62 Aligned_cols=259 Identities=15% Similarity=0.201 Sum_probs=184.8
Q ss_pred CCCEEEEeeCCCCCCceEEEccCCC-eeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceE
Q 018242 22 TQGVVQYQIEGAIGPESLAFDALGE-GPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLG 100 (359)
Q Consensus 22 ~~~~~~~~~~~~~~p~~i~~~~~G~-~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g 100 (359)
...++++..+ ...+|+++++++|+ ++|++..+++|++|+++ ++.+.+. .....+.+
T Consensus 34 ~~~~~~l~~~-~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~~~~~---------------------~~~~~~~g 90 (305)
T 3dr2_A 34 DARLLTLYDQ-ATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTVDVLL---------------------DATAFTNG 90 (305)
T ss_dssp TCCCEEEECC-CSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCEEEEE---------------------ESCSCEEE
T ss_pred CCceEEEecC-CcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCEEEEe---------------------CCCCccce
Confidence 3445556554 68899999999998 78899999999999985 4444442 22345889
Q ss_pred EEEecCCCeEEEEeCC-CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCC--ccccccceeeeeec
Q 018242 101 LCFNKTNGDLYIADAY-FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSS--QFQRRNHISVILSG 177 (359)
Q Consensus 101 i~~~~~~g~l~v~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~--~~~~~~~~~~~~~~ 177 (359)
+++++ +|++|+++.. ++|.+++++ ++.+.+.....+.+...|++++++++|+ +|++|... ....+.... ...
T Consensus 91 l~~d~-dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~--~~~ 165 (305)
T 3dr2_A 91 NAVDA-QQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPA--DPE 165 (305)
T ss_dssp EEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCC--CCS
T ss_pred eeECC-CCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCcccccccccc--ccc
Confidence 99999 8899999865 579999987 5666655433444556799999999999 99987531 000000000 001
Q ss_pred CCCceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCC-----CEEEEEEcCCCCCcceeEeec-CCCCCCce
Q 018242 178 DKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTS-----CRILRYWLKTSKAGTIEIVAQ-LPGFPDNI 251 (359)
Q Consensus 178 ~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~-----~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i 251 (359)
...+.|+++|++++++..+. ....|+++++++|++.||++++.. ++|++|+++...+...+.+.. ..+.|++|
T Consensus 166 ~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi 244 (305)
T 3dr2_A 166 LAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGF 244 (305)
T ss_dssp SSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSE
T ss_pred cCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeE
Confidence 12357999999878777666 667899999999999999999873 799999987554333444544 45679999
Q ss_pred EECCCCCEEEEEecCCCccccccccCCccceeeecCCccceeeeeecccccCcceEEEEECCCCCEEEEEEccCCceeec
Q 018242 252 KRSPRGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRS 331 (359)
Q Consensus 252 ~~d~~G~lwv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~ 331 (359)
++|++|+||+++. .++.+|+++|+.+..+..+.+
T Consensus 245 ~~d~~G~lwv~~~-----------------------------------------~gv~~~~~~g~~~~~~~~~~~----- 278 (305)
T 3dr2_A 245 CVDRGGWLWSSSG-----------------------------------------TGVCVFDSDGQLLGHIPTPGT----- 278 (305)
T ss_dssp EECTTSCEEECCS-----------------------------------------SEEEEECTTSCEEEEEECSSC-----
T ss_pred EECCCCCEEEecC-----------------------------------------CcEEEECCCCCEEEEEECCCc-----
Confidence 9999999999873 246778888888777765432
Q ss_pred eEEEE--EeCCEEEEecCCCCeEEEEcC
Q 018242 332 ISEVE--EKDGNLWIGSVNMPYAGLYNY 357 (359)
Q Consensus 332 ~~~~~--~~~g~l~ig~~~~~~l~~~~~ 357 (359)
+..++ .+++.||+++. ..|+.+++
T Consensus 279 ~~~~~f~~d~~~L~it~~--~~l~~~~~ 304 (305)
T 3dr2_A 279 ASNCTFDQAQQRLFITGG--PCLWMLPL 304 (305)
T ss_dssp CCEEEECTTSCEEEEEET--TEEEEEEC
T ss_pred eeEEEEeCCCCEEEEEcC--CeEEEEEC
Confidence 22222 24568999885 57777765
No 5
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.93 E-value=8.5e-24 Score=189.46 Aligned_cols=238 Identities=13% Similarity=0.163 Sum_probs=177.4
Q ss_pred EEeeCCCCCCceEEEccC-CCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEec
Q 018242 27 QYQIEGAIGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNK 105 (359)
Q Consensus 27 ~~~~~~~~~p~~i~~~~~-G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~ 105 (359)
++...+...+|++.++++ +.++|++..+++|++||+++++...+. ....+.++++++
T Consensus 6 ~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~----------------------~~~~~~~i~~~~ 63 (297)
T 3g4e_A 6 CVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVT----------------------MDAPVSSVALRQ 63 (297)
T ss_dssp EEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE----------------------CSSCEEEEEEBT
T ss_pred EEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEe----------------------CCCceEEEEECC
Confidence 444556789999999984 677889999999999999987554331 124578999999
Q ss_pred CCCeEEEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEE
Q 018242 106 TNGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMK 185 (359)
Q Consensus 106 ~~g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 185 (359)
+|++|++. .++|+++++++++++.+.......+...++++++|++|+ +|+++........ ......+.|++
T Consensus 64 -dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~------~~~~~~~~l~~ 134 (297)
T 3g4e_A 64 -SGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPA------VLERHQGALYS 134 (297)
T ss_dssp -TSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTT------BCCTTCEEEEE
T ss_pred -CCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccc------cccCCCcEEEE
Confidence 78899997 568999999999887765533333456789999999999 9999643210000 00123468999
Q ss_pred EeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcC--CCCCcceeEeecC---CCCCCceEECCCCCEE
Q 018242 186 YDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLK--TSKAGTIEIVAQL---PGFPDNIKRSPRGGFW 260 (359)
Q Consensus 186 ~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~--~~~~~~~~~~~~~---~~~p~~i~~d~~G~lw 260 (359)
++++ ++...+......|+++++++|++.+|++++..++|++|+++ .......+.+... .+.|+++++|++|+||
T Consensus 135 ~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lw 213 (297)
T 3g4e_A 135 LFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLW 213 (297)
T ss_dssp ECTT-SCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEE
T ss_pred EECC-CCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEE
Confidence 9987 55655556667899999999999999999999999999975 2223333444442 3579999999999999
Q ss_pred EEEecCCCccccccccCCcc-ceeeecCCccceeeeeecccc
Q 018242 261 VGIHSRRKGISKLVLSFPWI-GNVLIKLPIDIVKIHSSLVKL 301 (359)
Q Consensus 261 v~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~ 301 (359)
++++.++. +.++++. |+++..++.+...+++|++++
T Consensus 214 va~~~~~~-----v~~~d~~tG~~~~~i~~p~~~~t~~~f~g 250 (297)
T 3g4e_A 214 VACYNGGR-----VIRLDPVTGKRLQTVKLPVDKTTSCCFGG 250 (297)
T ss_dssp EEEETTTE-----EEEECTTTCCEEEEEECSSSBEEEEEEES
T ss_pred EEEcCCCE-----EEEEcCCCceEEEEEECCCCCceEEEEeC
Confidence 99987665 6777764 898888888766777777663
No 6
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.91 E-value=6.8e-22 Score=177.56 Aligned_cols=265 Identities=18% Similarity=0.266 Sum_probs=175.7
Q ss_pred eCCCCCCceEEEccCCCeeEE-------ecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEE
Q 018242 30 IEGAIGPESLAFDALGEGPYT-------GVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLC 102 (359)
Q Consensus 30 ~~~~~~p~~i~~~~~G~~l~~-------~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 102 (359)
.+++..|++++++++|++|++ +..+++|++||+.++++..+..+ ........|.+++
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~----------------~~~~~~~~~~~i~ 77 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKP----------------EVNGYGGIPAGCQ 77 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECC----------------EETTEECCEEEEE
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEec----------------ccCCCCCCCceEE
Confidence 556889999999999994445 47778999999887766655310 0011224588999
Q ss_pred EecCCCeEEEEeCCCcEEEEeCCCCeEEEE-eecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCc
Q 018242 103 FNKTNGDLYIADAYFGLLKVGPEGGLATAV-ATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTG 181 (359)
Q Consensus 103 ~~~~~g~l~v~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g 181 (359)
++++++++|+++..++|++++++ ++.+.+ .......+...+++++++++|+ +|+++.........+. .......+
T Consensus 78 ~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~--~~~~~~~~ 153 (314)
T 1pjx_A 78 CDRDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYT--RSMQEKFG 153 (314)
T ss_dssp ECSSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCC--BTTSSSCE
T ss_pred EecCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEecCccccccccc--ccccCCCC
Confidence 99933999999877789999998 776654 3322223345789999999999 9999754210000000 00011236
Q ss_pred eEEEEeCCCCcEEEEeCCCCCCceEEEc----cCCCEEEEEecCCCEEEEEEcC-CCCCcceeEeecCC----CCCCceE
Q 018242 182 RLMKYDPATKQVTVLLGNLSFPNGVALS----EDGNYILLAETTSCRILRYWLK-TSKAGTIEIVAQLP----GFPDNIK 252 (359)
Q Consensus 182 ~v~~~d~~~~~~~~~~~~~~~p~gia~~----~d~~~l~v~~~~~~~i~~~~~~-~~~~~~~~~~~~~~----~~p~~i~ 252 (359)
.|++++++ +++..+......|++++++ +|++.+|+++..+++|++|+.+ .......+.+...+ +.|++++
T Consensus 154 ~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~ 232 (314)
T 1pjx_A 154 SIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMD 232 (314)
T ss_dssp EEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEE
T ss_pred eEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceE
Confidence 79999987 6666555555678999999 9998899999888999999976 22222223333332 5588999
Q ss_pred ECCCCCEEEEEecCCCccccccccCCccceeeecCCccceeeeeecccccCcceEEEEECCC-CCEEEEEEccCCceeec
Q 018242 253 RSPRGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQ-GNVLEILEEIGRKMWRS 331 (359)
Q Consensus 253 ~d~~G~lwv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~g~~~~~ 331 (359)
+|++|++|+++...+ .+.+++++ ++.+..+..+. ..
T Consensus 233 ~d~~G~l~v~~~~~~---------------------------------------~i~~~d~~~g~~~~~~~~~~----~~ 269 (314)
T 1pjx_A 233 FDEDNNLLVANWGSS---------------------------------------HIEVFGPDGGQPKMRIRCPF----EK 269 (314)
T ss_dssp EBTTCCEEEEEETTT---------------------------------------EEEEECTTCBSCSEEEECSS----SC
T ss_pred ECCCCCEEEEEcCCC---------------------------------------EEEEEcCCCCcEeEEEeCCC----CC
Confidence 999999999987533 35556655 44444433221 23
Q ss_pred eEEEEEe-CCE-EEEecCCCCeEEEEcCC
Q 018242 332 ISEVEEK-DGN-LWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 332 ~~~~~~~-~g~-l~ig~~~~~~l~~~~~~ 358 (359)
+..+..+ +|+ ||+++..++.|.++++.
T Consensus 270 ~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 270 PSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred ceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 3344433 444 88887767778777654
No 7
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.88 E-value=6.8e-20 Score=162.60 Aligned_cols=245 Identities=13% Similarity=0.229 Sum_probs=170.5
Q ss_pred CCCCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEE
Q 018242 32 GAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLY 111 (359)
Q Consensus 32 ~~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~ 111 (359)
.+..|.+++++++|++++++..+++|.+||+++.....+.... ........|.++++++.++++|
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~---------------~~~~~~~~p~~i~~~~~~g~l~ 92 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECG---------------KRDSQLLYPNRVAVVRNSGDII 92 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBS---------------SSTTCBSSEEEEEEETTTTEEE
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccC---------------CCcccccCceEEEEEcCCCeEE
Confidence 4678999999999994455577889999998865444432100 0011224588999964489999
Q ss_pred EEeC--CCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCC
Q 018242 112 IADA--YFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPA 189 (359)
Q Consensus 112 v~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 189 (359)
+++. .+.|.+++.++.....+.. .....|++++++++|+ +|+++.. .+.|++++++
T Consensus 93 v~~~~~~~~i~~~d~~g~~~~~~~~----~~~~~~~~i~~~~~g~-l~v~~~~-----------------~~~i~~~~~~ 150 (286)
T 1q7f_A 93 VTERSPTHQIQIYNQYGQFVRKFGA----TILQHPRGVTVDNKGR-IIVVECK-----------------VMRVIIFDQN 150 (286)
T ss_dssp EEECGGGCEEEEECTTSCEEEEECT----TTCSCEEEEEECTTSC-EEEEETT-----------------TTEEEEECTT
T ss_pred EEcCCCCCEEEEECCCCcEEEEecC----ccCCCceEEEEeCCCC-EEEEECC-----------------CCEEEEEcCC
Confidence 9985 4579999976554433311 1335788999999999 9999653 3579999987
Q ss_pred CCcEEEEe--CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecC--CCCCCceEECCCCCEEEEEec
Q 018242 190 TKQVTVLL--GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL--PGFPDNIKRSPRGGFWVGIHS 265 (359)
Q Consensus 190 ~~~~~~~~--~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~p~~i~~d~~G~lwv~~~~ 265 (359)
+.....+. .....|++++++++++ +|+++..+++|.+|+.++. ....+... ...|.++++|++|++|+++..
T Consensus 151 g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~---~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~ 226 (286)
T 1q7f_A 151 GNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNRAHCVKVFNYEGQ---YLRQIGGEGITNYPIGVGINSNGEILIADNH 226 (286)
T ss_dssp SCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGGGTEEEEEETTCC---EEEEESCTTTSCSEEEEEECTTCCEEEEECS
T ss_pred CCEEEEeCCCCccCCcEEEEECCCCC-EEEEECCCCEEEEEcCCCC---EEEEEccCCccCCCcEEEECCCCCEEEEeCC
Confidence 54444443 3356799999999986 9999988999999996442 12222221 145889999999999999875
Q ss_pred CCCccccccccCCccceeeecCCccceeeeeecccccCcceEEEEECCCCCEEEEEEccCCceeeceEEEEEe-CCEEEE
Q 018242 266 RRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEK-DGNLWI 344 (359)
Q Consensus 266 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~l~i 344 (359)
.+ ..+.+++++++.+..+..... ...+..+..+ +|+||+
T Consensus 227 ~~--------------------------------------~~i~~~~~~g~~~~~~~~~~~--~~~~~~i~~~~~g~l~v 266 (286)
T 1q7f_A 227 NN--------------------------------------FNLTIFTQDGQLISALESKVK--HAQCFDVALMDDGSVVL 266 (286)
T ss_dssp SS--------------------------------------CEEEEECTTSCEEEEEEESSC--CSCEEEEEEETTTEEEE
T ss_pred CC--------------------------------------EEEEEECCCCCEEEEEcccCC--CCcceeEEECCCCcEEE
Confidence 32 146667778877776654222 2234455444 789999
Q ss_pred ecCCCCeEEEEcCC
Q 018242 345 GSVNMPYAGLYNYS 358 (359)
Q Consensus 345 g~~~~~~l~~~~~~ 358 (359)
++. ++.|.++++.
T Consensus 267 s~~-~~~v~v~~~~ 279 (286)
T 1q7f_A 267 ASK-DYRLYIYRYV 279 (286)
T ss_dssp EET-TTEEEEEECS
T ss_pred ECC-CCeEEEEEcc
Confidence 985 7889988764
No 8
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.88 E-value=2.2e-20 Score=169.48 Aligned_cols=224 Identities=19% Similarity=0.206 Sum_probs=161.6
Q ss_pred EEEEeeCCCCCCceEEEccC-CCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEE
Q 018242 25 VVQYQIEGAIGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCF 103 (359)
Q Consensus 25 ~~~~~~~~~~~p~~i~~~~~-G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 103 (359)
.+++.......+|+++++++ +.++|++..+++|++||+++++...+. ....+.++++
T Consensus 40 ~~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~----------------------~~~~v~~i~~ 97 (326)
T 2ghs_A 40 GRVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA----------------------LPFMGSALAK 97 (326)
T ss_dssp CEEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE----------------------CSSCEEEEEE
T ss_pred eEEeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE----------------------CCCcceEEEE
Confidence 45666556778999999997 667788888899999999887554331 1234778999
Q ss_pred ecCCCeEEEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceE
Q 018242 104 NKTNGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRL 183 (359)
Q Consensus 104 ~~~~g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 183 (359)
++ +|++|++. ..+|+++++++++++.+.......+...++++++|++|+ +|+++.... .....+.|
T Consensus 98 ~~-dg~l~v~~-~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~-----------~~~~~~~l 163 (326)
T 2ghs_A 98 IS-DSKQLIAS-DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRK-----------AETGAGSI 163 (326)
T ss_dssp EE-TTEEEEEE-TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETT-----------CCTTCEEE
T ss_pred eC-CCeEEEEE-CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCc-----------CCCCceEE
Confidence 98 89999997 457999999988876654322222345788999999999 999864211 01124679
Q ss_pred EEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcC--CC-CCcceeEeec---CCCCCCceEECCCC
Q 018242 184 MKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLK--TS-KAGTIEIVAQ---LPGFPDNIKRSPRG 257 (359)
Q Consensus 184 ~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~--~~-~~~~~~~~~~---~~~~p~~i~~d~~G 257 (359)
++++ + +++..+......|+++++++|++.+|++++..++|++|+++ .. .....+.+.. ..+.|+++++|++|
T Consensus 164 ~~~~-~-g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G 241 (326)
T 2ghs_A 164 YHVA-K-GKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG 241 (326)
T ss_dssp EEEE-T-TEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS
T ss_pred EEEe-C-CcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCC
Confidence 9999 4 66665544556789999999999999999888999999985 33 3333334433 23568999999999
Q ss_pred CEEEEEecCCCccccccccCCccceeeecCCccc
Q 018242 258 GFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDI 291 (359)
Q Consensus 258 ~lwv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 291 (359)
++|++++..+. +.+++++++.+..+..+.
T Consensus 242 ~lwva~~~~~~-----v~~~d~~g~~~~~i~~~~ 270 (326)
T 2ghs_A 242 HIWNARWGEGA-----VDRYDTDGNHIARYEVPG 270 (326)
T ss_dssp CEEEEEETTTE-----EEEECTTCCEEEEEECSC
T ss_pred CEEEEEeCCCE-----EEEECCCCCEEEEEECCC
Confidence 99999976543 555555666655554443
No 9
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.87 E-value=2.3e-19 Score=159.49 Aligned_cols=272 Identities=15% Similarity=0.171 Sum_probs=183.9
Q ss_pred EEeeC-CCCCCceEEEccCCCeeEEec-CCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEe
Q 018242 27 QYQIE-GAIGPESLAFDALGEGPYTGV-SDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFN 104 (359)
Q Consensus 27 ~~~~~-~~~~p~~i~~~~~G~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~ 104 (359)
.+.++ ....|++|+++++|+ +|++. .+++|.++|++ +++..+.. ......|.+++++
T Consensus 12 ~~~~~~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~-~~~~~~~~-------------------~~~~~~~~~i~~~ 70 (300)
T 2qc5_A 12 EFNLSIPDSGPYGITSSEDGK-VWFTQHKANKISSLDQS-GRIKEFEV-------------------PTPDAKVMCLIVS 70 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEEC-------------------SSTTCCEEEEEEC
T ss_pred EEecCCCCCCcceeeECCCCC-EEEEcCCCCeEEEECCC-CceEEEEC-------------------CCCCCcceeEEEC
Confidence 44443 467999999999999 66554 57899999998 65655421 1122468899999
Q ss_pred cCCCeEEEEeCC-CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceE
Q 018242 105 KTNGDLYIADAY-FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRL 183 (359)
Q Consensus 105 ~~~g~l~v~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 183 (359)
+ ++++|+++.. ++|.+++++ ++.+.+.... ....|++++++++|+ +|+++.. .+.|
T Consensus 71 ~-~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~---~~~~~~~i~~~~~g~-l~v~~~~-----------------~~~i 127 (300)
T 2qc5_A 71 S-LGDIWFTENGANKIGKLSKK-GGFTEYPLPQ---PDSGPYGITEGLNGD-IWFTQLN-----------------GDRI 127 (300)
T ss_dssp T-TSCEEEEETTTTEEEEECTT-SCEEEEECSS---TTCCEEEEEECSTTC-EEEEETT-----------------TTEE
T ss_pred C-CCCEEEEecCCCeEEEECCC-CCeEEecCCC---CCCCCccceECCCCC-EEEEccC-----------------CCeE
Confidence 8 8999999864 469999998 6554432211 225688999999999 9999643 3579
Q ss_pred EEEeCCCCcEEEEe--CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec--CCCCCCceEECCCCCE
Q 018242 184 MKYDPATKQVTVLL--GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ--LPGFPDNIKRSPRGGF 259 (359)
Q Consensus 184 ~~~d~~~~~~~~~~--~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~p~~i~~d~~G~l 259 (359)
++++++ +++..+. .....|.+++++++++ +|++...++.|++++.++ ....+.. ....|.++++|++|++
T Consensus 128 ~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~d~~g~l 201 (300)
T 2qc5_A 128 GKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQNNSIGRITNTG----KLEEYPLPTNAAAPVGITSGNDGAL 201 (300)
T ss_dssp EEECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEEEECTTSSE
T ss_pred EEECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEecCCCeEEEECCCC----cEEEeeCCCCCCCcceEEECCCCCE
Confidence 999998 6665442 2356789999999998 999998889999998632 2222221 1235888999999999
Q ss_pred EEEEecCCCccccccccCCccceeeec-CCccceeeeeecccccCc-------ceEEEEECCCCCEEEEEEccCCceeec
Q 018242 260 WVGIHSRRKGISKLVLSFPWIGNVLIK-LPIDIVKIHSSLVKLSGN-------GGMAMRISEQGNVLEILEEIGRKMWRS 331 (359)
Q Consensus 260 wv~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~g~~~~~ 331 (359)
|+++...+. +.++++.++.... ++.....+..++++.... .+.+.++++++... .+..+.+ ...
T Consensus 202 ~v~~~~~~~-----i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~-~~~~~~~--~~~ 273 (300)
T 2qc5_A 202 WFVEIMGNK-----IGRITTTGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITNDNTIQ-EYQLQTE--NAE 273 (300)
T ss_dssp EEEETTTTE-----EEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEE-EEECCST--TCC
T ss_pred EEEccCCCE-----EEEEcCCCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCCCcEE-EEECCcc--CCc
Confidence 999876554 6666666655432 332233444444432211 14677788766544 3333222 233
Q ss_pred eEEEEEe-CCEEEEecCCCCeEEEEcCC
Q 018242 332 ISEVEEK-DGNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 332 ~~~~~~~-~g~l~ig~~~~~~l~~~~~~ 358 (359)
+..+..+ +|+||+++. + +|.++++.
T Consensus 274 ~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 274 PHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp CCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred cceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 4555555 789999998 6 89998865
No 10
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.87 E-value=2.7e-19 Score=162.22 Aligned_cols=202 Identities=22% Similarity=0.292 Sum_probs=146.9
Q ss_pred CCCCCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeE
Q 018242 31 EGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDL 110 (359)
Q Consensus 31 ~~~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l 110 (359)
+....|++++++++|+++|++..+++|++||+++++++.+. ......|.++++++ ++++
T Consensus 42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~--------------------~~~~~~~~~i~~~~-dg~l 100 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF--------------------VSHKANPAAIKIHK-DGRL 100 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE--------------------ECSSSSEEEEEECT-TSCE
T ss_pred ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe--------------------eCCCCCcceEEECC-CCcE
Confidence 34578999999999995557788899999999887655432 01224588999998 8899
Q ss_pred EEEeCCC-----cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEE
Q 018242 111 YIADAYF-----GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMK 185 (359)
Q Consensus 111 ~v~~~~~-----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 185 (359)
|+++... +|+++++++++.+.+.... .....+++++++++|+ +|+++.... .....+.|++
T Consensus 101 ~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~i~~d~~g~-l~v~~~~~~-----------~~~~~~~l~~ 166 (333)
T 2dg1_A 101 FVCYLGDFKSTGGIFAATENGDNLQDIIEDL--STAYCIDDMVFDSKGG-FYFTDFRGY-----------STNPLGGVYY 166 (333)
T ss_dssp EEEECTTSSSCCEEEEECTTSCSCEEEECSS--SSCCCEEEEEECTTSC-EEEEECCCB-----------TTBCCEEEEE
T ss_pred EEEeCCCCCCCceEEEEeCCCCEEEEEEccC--ccCCcccceEECCCCC-EEEEecccc-----------ccCCCceEEE
Confidence 9997654 7999999988766433211 1234688999999999 999965310 0012457999
Q ss_pred EeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC-C-Ccce--eEeecCC--CCCCceEECCCCCE
Q 018242 186 YDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS-K-AGTI--EIVAQLP--GFPDNIKRSPRGGF 259 (359)
Q Consensus 186 ~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~-~-~~~~--~~~~~~~--~~p~~i~~d~~G~l 259 (359)
++++++++..+......|+++++++|++.+|+++...++|++|+++.. . .... ..+.... ..|+++++|++|++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l 246 (333)
T 2dg1_A 167 VSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNL 246 (333)
T ss_dssp ECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCE
T ss_pred EeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCE
Confidence 999877776655455668999999999989999988899999998532 1 1111 1122222 36889999999999
Q ss_pred EEEEecCC
Q 018242 260 WVGIHSRR 267 (359)
Q Consensus 260 wv~~~~~~ 267 (359)
|+++...+
T Consensus 247 ~v~~~~~~ 254 (333)
T 2dg1_A 247 YVAMYGQG 254 (333)
T ss_dssp EEEEETTT
T ss_pred EEEEcCCC
Confidence 99987543
No 11
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.86 E-value=1.7e-19 Score=162.08 Aligned_cols=215 Identities=19% Similarity=0.179 Sum_probs=154.9
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
..|++++++++|+++|++..+++|+++|+++. ...+. .....|.++++++ +|++|++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~---------------------~~~~~p~gia~~~-dG~l~va 88 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHA---------------------TVEGKVSGLAFTS-NGDLVAT 88 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEE---------------------ECSSEEEEEEECT-TSCEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEE---------------------eCCCCceeEEEcC-CCcEEEE
Confidence 68999999999996667778899999999875 32221 1234689999999 7889999
Q ss_pred eCC-C--cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCC
Q 018242 114 DAY-F--GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPAT 190 (359)
Q Consensus 114 ~~~-~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 190 (359)
+.. + .|++++..+++++.+... . ....+++++..++++ +|+++.. .+.|+++|+.+
T Consensus 89 d~~~~~~~v~~~d~~~g~~~~~~~~-~--~~~~~~g~~~~~~~~-~~v~d~~-----------------~g~i~~~d~~~ 147 (306)
T 2p4o_A 89 GWNADSIPVVSLVKSDGTVETLLTL-P--DAIFLNGITPLSDTQ-YLTADSY-----------------RGAIWLIDVVQ 147 (306)
T ss_dssp EECTTSCEEEEEECTTSCEEEEEEC-T--TCSCEEEEEESSSSE-EEEEETT-----------------TTEEEEEETTT
T ss_pred eccCCcceEEEEcCCCCeEEEEEeC-C--CccccCcccccCCCc-EEEEECC-----------------CCeEEEEeCCC
Confidence 854 2 388999888887665542 1 234567888777776 9999643 45899999876
Q ss_pred CcEEEE-----------eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCC-CCCcceeEeecCCCCCCceEECCCCC
Q 018242 191 KQVTVL-----------LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKT-SKAGTIEIVAQLPGFPDNIKRSPRGG 258 (359)
Q Consensus 191 ~~~~~~-----------~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~p~~i~~d~~G~ 258 (359)
+..+.. ...+..|+|| ++|++.||++++.+++|++|+++. ......+.+... ..|++|++|++|+
T Consensus 148 ~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~vd~dG~ 224 (306)
T 2p4o_A 148 PSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFAFDVEGN 224 (306)
T ss_dssp TEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-CCCSSEEEBTTCC
T ss_pred CcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-CCCCCeEECCCCC
Confidence 533221 1234568888 788889999999999999999875 333344444443 4599999999999
Q ss_pred EEEEEecCCCccccccccCCcccee--eecCCccceeeeeeccc
Q 018242 259 FWVGIHSRRKGISKLVLSFPWIGNV--LIKLPIDIVKIHSSLVK 300 (359)
Q Consensus 259 lwv~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~ 300 (359)
+|++.+..+. +.++++.|++ +..++.+...+++++++
T Consensus 225 l~va~~~~~~-----V~~~~~~G~~~~~~~~~~~~~~p~~~a~~ 263 (306)
T 2p4o_A 225 LYGATHIYNS-----VVRIAPDRSTTIIAQAEQGVIGSTAVAFG 263 (306)
T ss_dssp EEEECBTTCC-----EEEECTTCCEEEEECGGGTCTTEEEEEEC
T ss_pred EEEEeCCCCe-----EEEECCCCCEEEEeecccccCCceEEEEe
Confidence 9999987665 6777777776 33455554555555554
No 12
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.86 E-value=2.6e-18 Score=152.62 Aligned_cols=267 Identities=12% Similarity=0.159 Sum_probs=178.9
Q ss_pred CCCCCceEEEccCCCeeEEecC-CCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeE
Q 018242 32 GAIGPESLAFDALGEGPYTGVS-DGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDL 110 (359)
Q Consensus 32 ~~~~p~~i~~~~~G~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l 110 (359)
....|++++++++|+ +|++.. +++|.++|++ +++..+.. ......|.++++++ +|++
T Consensus 13 ~~~~~~~i~~d~~g~-l~v~~~~~~~v~~~d~~-~~~~~~~~-------------------~~~~~~~~~i~~~~-~g~l 70 (299)
T 2z2n_A 13 QDTGPYGITVSDKGK-VWITQHKANMISCINLD-GKITEYPL-------------------PTPDAKVMCLTISS-DGEV 70 (299)
T ss_dssp SSCCEEEEEECTTSC-EEEEETTTTEEEEECTT-CCEEEEEC-------------------SSTTCCEEEEEECT-TSCE
T ss_pred cCCCccceEECCCCC-EEEEecCCCcEEEEcCC-CCeEEecC-------------------CcccCceeeEEECC-CCCE
Confidence 457899999999999 666654 6899999998 65655431 11235688999998 8999
Q ss_pred EEEeCC-CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCC
Q 018242 111 YIADAY-FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPA 189 (359)
Q Consensus 111 ~v~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 189 (359)
|+++.. ++|++++++ ++++.+... .....|++++++++|+ +|+++.. .+.|+++|+
T Consensus 71 ~v~~~~~~~i~~~~~~-g~~~~~~~~---~~~~~~~~i~~~~~g~-l~v~~~~-----------------~~~i~~~d~- 127 (299)
T 2z2n_A 71 WFTENAANKIGRITKK-GIIKEYTLP---NPDSAPYGITEGPNGD-IWFTEMN-----------------GNRIGRITD- 127 (299)
T ss_dssp EEEETTTTEEEEECTT-SCEEEEECS---STTCCEEEEEECTTSC-EEEEETT-----------------TTEEEEECT-
T ss_pred EEeCCCCCeEEEECCC-CcEEEEeCC---CcCCCceeeEECCCCC-EEEEecC-----------------CceEEEECC-
Confidence 999864 469999987 444443321 1234788999999999 9999543 357999998
Q ss_pred CCcEEEEe--CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEee-c-CCCCCCceEECCCCCEEEEEec
Q 018242 190 TKQVTVLL--GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA-Q-LPGFPDNIKRSPRGGFWVGIHS 265 (359)
Q Consensus 190 ~~~~~~~~--~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~-~~~~p~~i~~d~~G~lwv~~~~ 265 (359)
+++...+. .....|.+++++++++ +|++....+.|++++. .. ....+. . ....|.++++|++|++|+++..
T Consensus 128 ~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g---~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 202 (299)
T 2z2n_A 128 DGKIREYELPNKGSYPSFITLGSDNA-LWFTENQNNAIGRITE-SG---DITEFKIPTPASGPVGITKGNDDALWFVEII 202 (299)
T ss_dssp TCCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TC---CEEEEECSSTTCCEEEEEECTTSSEEEEETT
T ss_pred CCCEEEecCCCCCCCCceEEEcCCCC-EEEEeCCCCEEEEEcC-CC---cEEEeeCCCCCCcceeEEECCCCCEEEEccC
Confidence 46665443 2345689999999986 8999888889999986 22 222221 1 2235788999999999999876
Q ss_pred CCCccccccccCCccceeeec-CCccceeeeeeccccc--------CcceEEEEECCCCCEEEEEEccCCceeeceEEEE
Q 018242 266 RRKGISKLVLSFPWIGNVLIK-LPIDIVKIHSSLVKLS--------GNGGMAMRISEQGNVLEILEEIGRKMWRSISEVE 336 (359)
Q Consensus 266 ~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~ 336 (359)
.+. +.+++++++.... .+.....+..+++... .. +.+.++++++ .+..+..+.+ ...+..+.
T Consensus 203 ~~~-----i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-~~i~~~d~~g-~~~~~~~~~~--~~~~~~i~ 273 (299)
T 2z2n_A 203 GNK-----IGRITTSGEITEFKIPTPNARPHAITAGAGIDLWFTEWGA-NKIGRLTSNN-IIEEYPIQIK--SAEPHGIC 273 (299)
T ss_dssp TTE-----EEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTT-TEEEEEETTT-EEEEEECSSS--SCCEEEEE
T ss_pred Cce-----EEEECCCCcEEEEECCCCCCCceeEEECCCCCEEEeccCC-ceEEEECCCC-ceEEEeCCCC--CCccceEE
Confidence 543 5666656554332 2222233444444322 22 4677777755 3444433222 12344443
Q ss_pred EeCCEEEEecCCCCeEEEEcCC
Q 018242 337 EKDGNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 337 ~~~g~l~ig~~~~~~l~~~~~~ 358 (359)
..+|+||+++. ++.|.++++.
T Consensus 274 ~~~g~l~v~~~-~~~l~~~~~~ 294 (299)
T 2z2n_A 274 FDGETIWFAME-CDKIGKLTLI 294 (299)
T ss_dssp ECSSCEEEEET-TTEEEEEEEC
T ss_pred ecCCCEEEEec-CCcEEEEEcC
Confidence 37899999986 6889988764
No 13
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.86 E-value=2.5e-19 Score=157.25 Aligned_cols=234 Identities=18% Similarity=0.279 Sum_probs=161.8
Q ss_pred CCceEEEccCCCeeEE-e-cCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE
Q 018242 35 GPESLAFDALGEGPYT-G-VSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI 112 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~-~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v 112 (359)
.|++++++++|+ +|+ + ..+++|.++|+.+.....+. ......|.+|++++ ++++|+
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~~~~~i~~~~~~~~~~~~~~--------------------~~~~~~p~~i~~~~-~g~l~v 82 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEGMYGRVVKLATGSTGTTVLP--------------------FNGLYQPQGLAVDG-AGTVYV 82 (270)
T ss_dssp CEEEEEECTTCC-EEEEECSSSCEEEEECC-----EECC--------------------CCSCCSCCCEEECT-TCCEEE
T ss_pred CccceEECCCCC-EEEEccCCCCcEEEecCCCcccceEe--------------------eCCcCCcceeEECC-CCCEEE
Confidence 999999999999 666 5 66789999998765332210 11224588999999 788999
Q ss_pred EeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCc
Q 018242 113 ADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQ 192 (359)
Q Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 192 (359)
++..++|++++++++....+.. .....|++++++++|+ +|+++.. .+.|++++..+..
T Consensus 83 ~~~~~~i~~~d~~~~~~~~~~~----~~~~~p~~i~~~~~g~-l~v~~~~-----------------~~~i~~~~~~~~~ 140 (270)
T 1rwi_B 83 TDFNNRVVTLAAGSNNQTVLPF----DGLNYPEGLAVDTQGA-VYVADRG-----------------NNRVVKLAAGSKT 140 (270)
T ss_dssp EETTTEEEEECTTCSCCEECCC----CSCSSEEEEEECTTCC-EEEEEGG-----------------GTEEEEECTTCCS
T ss_pred EcCCCEEEEEeCCCceEeeeec----CCcCCCcceEECCCCC-EEEEECC-----------------CCEEEEEECCCce
Confidence 9875579999998776543311 1235788999999999 9999643 3579999876544
Q ss_pred EEEE-eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-CCCCCCceEECCCCCEEEEEecCCCcc
Q 018242 193 VTVL-LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGGFWVGIHSRRKGI 270 (359)
Q Consensus 193 ~~~~-~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwv~~~~~~~~~ 270 (359)
.... ......|.+++++++++ +|+++..+++|.+|+.++... ..... ....|.++++|++|++|+++...+
T Consensus 141 ~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~---~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~--- 213 (270)
T 1rwi_B 141 QTVLPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNNQ---VVLPFTDITAPWGIAVDEAGTVYVTEHNTN--- 213 (270)
T ss_dssp CEECCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEEECTTTCCE---EECCCSSCCSEEEEEECTTCCEEEEETTTS---
T ss_pred eEeeccccCCCceeEEEeCCCC-EEEEECCCCEEEEEecCCCce---EeecccCCCCceEEEECCCCCEEEEECCCC---
Confidence 3322 23345799999999987 999998889999998754321 11111 114588999999999999987543
Q ss_pred ccccccCCccceeeecCCccceeeeeecccccCcceEEEEECCCCCEEEEEEccCCceeeceEEEEEe-CCEEEEecCCC
Q 018242 271 SKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEK-DGNLWIGSVNM 349 (359)
Q Consensus 271 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~l~ig~~~~ 349 (359)
.+.++++++....... ..+ ...+..+..+ +|+||+++..+
T Consensus 214 ------------------------------------~v~~~~~~~~~~~~~~-~~~--~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 214 ------------------------------------QVVKLLAGSTTSTVLP-FTG--LNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp ------------------------------------CEEEECTTCSCCEECC-CCS--CSCEEEEEECTTCCEEEEEGGG
T ss_pred ------------------------------------cEEEEcCCCCcceeec-cCC--CCCceeEEECCCCCEEEEECCC
Confidence 3455666554433221 112 2345566555 68999999999
Q ss_pred CeEEEEcCC
Q 018242 350 PYAGLYNYS 358 (359)
Q Consensus 350 ~~l~~~~~~ 358 (359)
+.|.++++.
T Consensus 255 ~~v~~~~~~ 263 (270)
T 1rwi_B 255 DRVVKLTSL 263 (270)
T ss_dssp TEEEEECCC
T ss_pred CEEEEEcCC
Confidence 999999875
No 14
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.85 E-value=1.1e-18 Score=163.08 Aligned_cols=243 Identities=12% Similarity=0.067 Sum_probs=166.6
Q ss_pred CCCCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEE
Q 018242 32 GAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLY 111 (359)
Q Consensus 32 ~~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~ 111 (359)
++..|.+|+++++|++|+++..+++|.++|++++....+. .....|. ++++++++.||
T Consensus 129 ~~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~---------------------~~~~~~~-ia~~~~g~~l~ 186 (409)
T 3hrp_A 129 KFKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVH---------------------PGFKGGK-PAVTKDKQRVY 186 (409)
T ss_dssp CCCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEE---------------------ETCCBCB-CEECTTSSEEE
T ss_pred ccCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEee---------------------ccCCCCc-eeEecCCCcEE
Confidence 4789999999999996667777799999999987655542 1123466 89999667788
Q ss_pred EEeCCC--cEEEEeCCCCeEEEEeecCCCccccccceEEEeC-CCCEEEEEeCCCccccccceeeeeecCCCceEEEEeC
Q 018242 112 IADAYF--GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQ-STGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDP 188 (359)
Q Consensus 112 v~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~-~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 188 (359)
+++... .|++++..++................|+++++++ +|+ ||+++. .+.|+++|+
T Consensus 187 ~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~-lyv~d~------------------~~~I~~~d~ 247 (409)
T 3hrp_A 187 SIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEW-LYFVDS------------------NKNFGRFNV 247 (409)
T ss_dssp EEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSE-EEEECT------------------TCEEEEEET
T ss_pred EEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCe-EEEEEC------------------CCcEEEEEC
Confidence 887644 6999998766432222111111345789999999 566 999842 357999999
Q ss_pred CCCcEEEE----eCC--CCCCc-eEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecC---------------CC
Q 018242 189 ATKQVTVL----LGN--LSFPN-GVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL---------------PG 246 (359)
Q Consensus 189 ~~~~~~~~----~~~--~~~p~-gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~---------------~~ 246 (359)
+++....+ ..+ ...|. +++++|+++.||+++..+++|++|+.++. ...+... -.
T Consensus 248 ~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~ 323 (409)
T 3hrp_A 248 KTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFA 323 (409)
T ss_dssp TTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCS
T ss_pred CCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeC
Confidence 87766554 222 12355 99999976789999999999999987543 2222211 12
Q ss_pred CCCceEECCCCCEEEEEe-cCCCccccccccCCccceeeecCCccceeeeeecccccCcceEEEEEC-CCCCEEEEEEc-
Q 018242 247 FPDNIKRSPRGGFWVGIH-SRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRIS-EQGNVLEILEE- 323 (359)
Q Consensus 247 ~p~~i~~d~~G~lwv~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~- 323 (359)
.|.+|++|++|+||++.. .++. +. +++ ++|.+......
T Consensus 324 ~P~gia~d~dG~lyvad~~~~~~-----I~----------------------------------~~~~~~G~v~~~~g~~ 364 (409)
T 3hrp_A 324 QPNGMTVDEDGNFYIVDGFKGYC-----LR----------------------------------KLDILDGYVSTVAGQV 364 (409)
T ss_dssp SEEEEEECTTCCEEEEETTTTCE-----EE----------------------------------EEETTTTEEEEEEECT
T ss_pred CCeEEEEeCCCCEEEEeCCCCCE-----EE----------------------------------EEECCCCEEEEEeCCC
Confidence 488999999999999987 6543 33 333 22322211111
Q ss_pred -----cCC----ceeeceEEEEEe-CCEEEEecCCCCeEEEEcCC
Q 018242 324 -----IGR----KMWRSISEVEEK-DGNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 324 -----~~g----~~~~~~~~~~~~-~g~l~ig~~~~~~l~~~~~~ 358 (359)
.+| ..+..+.++..+ +|+||++...+.+|.++.++
T Consensus 365 ~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 365 DVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp TCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred CCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 011 124567777766 69999999999999998764
No 15
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.84 E-value=1.2e-18 Score=163.76 Aligned_cols=242 Identities=14% Similarity=0.126 Sum_probs=165.5
Q ss_pred CCCCCceEEEccC---CCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCC
Q 018242 32 GAIGPESLAFDAL---GEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNG 108 (359)
Q Consensus 32 ~~~~p~~i~~~~~---G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g 108 (359)
++..|.+|+++++ |+ ||++...++|+++++.+++++.+. .....|.+|++++ +|
T Consensus 137 ~~~~P~gvavd~~s~~g~-Lyv~D~~~~I~~id~~~g~v~~~~---------------------~~~~~P~giavd~-dG 193 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDD-LYWVGQRDAFRHVDFVNQYVDIKT---------------------TNIGQCADVNFTL-NG 193 (433)
T ss_dssp CCSCCCEEEECTTTTTCE-EEEECBTSCEEEEETTTTEEEEEC---------------------CCCSCEEEEEECT-TC
T ss_pred ccCCCceEEEccccCCCE-EEEEeCCCCEEEEECCCCEEEEee---------------------cCCCCccEEEECC-CC
Confidence 6789999999984 77 555443389999999877665442 2335699999999 66
Q ss_pred eEEEEeCC-----CcEEEEeCCCCeE--EEEeecCCCccccccceEEEeC-CCCEEEEEeCCCccccccceeeeeecCCC
Q 018242 109 DLYIADAY-----FGLLKVGPEGGLA--TAVATQSEGIPFRFCNSLDIDQ-STGIIYFTDSSSQFQRRNHISVILSGDKT 180 (359)
Q Consensus 109 ~l~v~~~~-----~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~d~-~g~~l~v~d~~~~~~~~~~~~~~~~~~~~ 180 (359)
+||+++.. .+++.++..++.. ..+. ....|+++++++ +|+ |||++.. .
T Consensus 194 ~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~------~~~~P~giavd~~~G~-lyv~d~~-----------------~ 249 (433)
T 4hw6_A 194 DMVVVDDQSSDTNTGIYLFTRASGFTERLSLC------NARGAKTCAVHPQNGK-IYYTRYH-----------------H 249 (433)
T ss_dssp CEEEEECCSCTTSEEEEEECGGGTTCCEEEEE------ECSSBCCCEECTTTCC-EEECBTT-----------------C
T ss_pred CEEEEcCCCCcccceEEEEECCCCeecccccc------ccCCCCEEEEeCCCCe-EEEEECC-----------------C
Confidence 79999863 2477776654322 1111 345789999999 788 9999754 4
Q ss_pred ceEEEEeCCCCcE-EEEe--CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC--CCcceeEeecC---C-------
Q 018242 181 GRLMKYDPATKQV-TVLL--GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS--KAGTIEIVAQL---P------- 245 (359)
Q Consensus 181 g~v~~~d~~~~~~-~~~~--~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~--~~~~~~~~~~~---~------- 245 (359)
+.|++++++++.+ ..+. .....+.+++++++++.||+++..+++|++++.+.. .......+... .
T Consensus 250 ~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~ 329 (433)
T 4hw6_A 250 AMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMG 329 (433)
T ss_dssp SEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEG
T ss_pred CEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcc
Confidence 5799999987766 3332 223345689999999999999999999999987632 22111222211 1
Q ss_pred -----CCCCceEE---------CCCCCEEEEEecCCCccccccccCCccceeeecCCccceeeeeecccccCcceEEEEE
Q 018242 246 -----GFPDNIKR---------SPRGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRI 311 (359)
Q Consensus 246 -----~~p~~i~~---------d~~G~lwv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (359)
..|.++++ |++|+||++...++. +. ++
T Consensus 330 ~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~-----I~----------------------------------~~ 370 (433)
T 4hw6_A 330 TGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHT-----VR----------------------------------VL 370 (433)
T ss_dssp GGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTE-----EE----------------------------------EE
T ss_pred cceEEcCCccEEEEccccccccCCCCcEEEEECCCCE-----EE----------------------------------EE
Confidence 23778999 999999999987553 33 34
Q ss_pred CCCCCEEEEEEc--------cCC-----ceeeceEEEEEe--CCEEEEecCCCCeEEEEcCCC
Q 018242 312 SEQGNVLEILEE--------IGR-----KMWRSISEVEEK--DGNLWIGSVNMPYAGLYNYSS 359 (359)
Q Consensus 312 ~~~g~~~~~~~~--------~~g-----~~~~~~~~~~~~--~g~l~ig~~~~~~l~~~~~~~ 359 (359)
+++|.+...... .+| ..+..+.++..+ +|+|||+...+++|.++.++.
T Consensus 371 ~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e~ 433 (433)
T 4hw6_A 371 TPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPEE 433 (433)
T ss_dssp CTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEECC
T ss_pred CCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecCC
Confidence 444422222211 011 124456777665 899999999999999998763
No 16
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.82 E-value=3.7e-18 Score=154.95 Aligned_cols=254 Identities=14% Similarity=0.220 Sum_probs=162.8
Q ss_pred CCCCCceEEEccCCCeeEEecCC------------------------CEEEEEEcCCcceEEEeecCCCCCCCCCCcccc
Q 018242 32 GAIGPESLAFDALGEGPYTGVSD------------------------GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYD 87 (359)
Q Consensus 32 ~~~~p~~i~~~~~G~~l~~~~~~------------------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (359)
++..|.+++++++|++++++..+ +.|+++|++++++....
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~---------------- 85 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSS---------------- 85 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEE----------------
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEecc----------------
Confidence 46789999999999944444444 26999999876543321
Q ss_pred cccccccCCcceEEEEecCCCeEEEEeCCC-cEEEEeCCCC--eEEEEeecC-C---CccccccceEEEeC-CCCEEEEE
Q 018242 88 HAAKEHICGRPLGLCFNKTNGDLYIADAYF-GLLKVGPEGG--LATAVATQS-E---GIPFRFCNSLDIDQ-STGIIYFT 159 (359)
Q Consensus 88 ~~~~~~~~~~p~gi~~~~~~g~l~v~~~~~-~i~~~~~~~~--~~~~~~~~~-~---~~~~~~~~~l~~d~-~g~~l~v~ 159 (359)
.......|.++++++ +|++|+++..+ .|.++++++. .+..+.... . ...+..|++|++++ +|+ +|++
T Consensus 86 ---~~~~~~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~ 160 (329)
T 3fvz_A 86 ---GKNLFYLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVS 160 (329)
T ss_dssp ---CTTTCSSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEE
T ss_pred ---CCCccCCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEE
Confidence 112234699999999 88899998754 6999998876 333332211 0 12345799999999 788 9999
Q ss_pred eCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeC----------CCCCCceEEEccCCCEEEEEecCCCEEEEEE
Q 018242 160 DSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLG----------NLSFPNGVALSEDGNYILLAETTSCRILRYW 229 (359)
Q Consensus 160 d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~----------~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~ 229 (359)
+.. ..+.|.++++++.....+.. .+..|.++++++++..+|+++..+++|.+|+
T Consensus 161 d~~----------------~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~ 224 (329)
T 3fvz_A 161 DGY----------------CNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFK 224 (329)
T ss_dssp ECS----------------SCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eCC----------------CCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEE
Confidence 741 13579999976443333321 2345999999999667999999999999999
Q ss_pred cCCCCCcceeEeec--CCCCCCceEECCCCCEEEEEecCCCccccccccCCccceeeecCCccceeeeeecccccCcceE
Q 018242 230 LKTSKAGTIEIVAQ--LPGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGM 307 (359)
Q Consensus 230 ~~~~~~~~~~~~~~--~~~~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (359)
.+..+. ...+.. ....|.++++.+ |.++..... +.+-+ ... ..
T Consensus 225 ~~~G~~--~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~--------~~v~~-----------------------~~~-~~ 269 (329)
T 3fvz_A 225 TDTKEF--VREIKHASFGRNVFAISYIP-GFLFAVNGK--------PYFGD-----------------------QEP-VQ 269 (329)
T ss_dssp TTTCCE--EEEECCTTTTTCEEEEEEET-TEEEEEECC--------CCTTC-----------------------SCC-CC
T ss_pred CCCCcE--EEEEeccccCCCcceeeecC-CEEEEeCCC--------EEecc-----------------------CCC-cE
Confidence 763221 122211 222345566666 544443221 01000 011 34
Q ss_pred EEEEC-CCCCEEEEEEccCCceeeceEEEEEe-CCEEEEecCCCCeEEEEcCC
Q 018242 308 AMRIS-EQGNVLEILEEIGRKMWRSISEVEEK-DGNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 308 ~~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~l~ig~~~~~~l~~~~~~ 358 (359)
+..++ .+|+.+..+.... .....+.++..+ +|+||+++..+++|.+++++
T Consensus 270 v~~~~~~~g~~~~~~~~~~-~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 270 GFVMNFSSGEIIDVFKPVR-KHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EEEEETTTCCEEEEECCSS-SCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred EEEEEcCCCeEEEEEcCCC-CccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 55566 5577776664222 224566777665 77999999999999998763
No 17
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.82 E-value=3.2e-18 Score=156.63 Aligned_cols=211 Identities=16% Similarity=0.149 Sum_probs=154.8
Q ss_pred EeeCCCCCCceEEEcc-CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecC
Q 018242 28 YQIEGAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKT 106 (359)
Q Consensus 28 ~~~~~~~~p~~i~~~~-~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~ 106 (359)
..+..+..|.++++++ +++++|++...++|+++++++...+.+. ......|.|+++|+.
T Consensus 67 ~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~--------------------~~~~~~p~glavd~~ 126 (349)
T 3v64_C 67 LLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV--------------------STGLESPGGLAVDWV 126 (349)
T ss_dssp EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--------------------CSSCSCCCEEEEETT
T ss_pred EeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE--------------------eCCCCCccEEEEecC
Confidence 3345577899999995 6777888899999999999876433321 122356899999987
Q ss_pred CCeEEEEeCC-CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEE
Q 018242 107 NGDLYIADAY-FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMK 185 (359)
Q Consensus 107 ~g~l~v~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 185 (359)
+++||+++.. +.|.++++++...+.+.. .....|++|++||++++||++|.+. .+.|++
T Consensus 127 ~g~ly~~d~~~~~I~~~~~dG~~~~~l~~----~~l~~P~~iavdp~~g~ly~td~~~----------------~~~I~r 186 (349)
T 3v64_C 127 HDKLYWTDSGTSRIEVANLDGAHRKVLLW----QSLEKPRAIALHPMEGTIYWTDWGN----------------TPRIEA 186 (349)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEEC----TTCSCEEEEEEETTTTEEEEEECSS----------------SCEEEE
T ss_pred CCeEEEEcCCCCeEEEEcCCCCceEEEEe----CCCCCcceEEEecCcCeEEEeccCC----------------CCEEEE
Confidence 8999999875 469999998765444432 1345789999998655699997651 257999
Q ss_pred EeCCCCcEEEEe-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-CCCCCCceEECCCCCEEEEE
Q 018242 186 YDPATKQVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGGFWVGI 263 (359)
Q Consensus 186 ~d~~~~~~~~~~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwv~~ 263 (359)
+++++...+.+. ..+..|+||+++++++.|||+++..++|+++++++.. .+.+.. ....|.+|+++ +|++|++.
T Consensus 187 ~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~---~~~~~~~~~~~P~giav~-~~~ly~td 262 (349)
T 3v64_C 187 SSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH---RKAVISQGLPHPFAITVF-EDSLYWTD 262 (349)
T ss_dssp EETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECSSCSSEEEEEEE-TTEEEEEE
T ss_pred EeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc---eEEEEeCCCCCceEEEEE-CCEEEEec
Confidence 998865444443 4567899999999888999999999999999987532 233332 23569999995 57899999
Q ss_pred ecCCCccccccccCC-ccceeeecC
Q 018242 264 HSRRKGISKLVLSFP-WIGNVLIKL 287 (359)
Q Consensus 264 ~~~~~~~~~~~~~~~-~~g~~~~~~ 287 (359)
+..+. +..++ .+|+....+
T Consensus 263 ~~~~~-----V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 263 WHTKS-----INSANKFTGKNQEII 282 (349)
T ss_dssp TTTTE-----EEEEETTTCCSCEEE
T ss_pred CCCCe-----EEEEEccCCCccEEe
Confidence 88765 55554 466655444
No 18
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.82 E-value=1.4e-17 Score=156.64 Aligned_cols=244 Identities=16% Similarity=0.179 Sum_probs=167.2
Q ss_pred CCCCCCceEEEcc--CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCC
Q 018242 31 EGAIGPESLAFDA--LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNG 108 (359)
Q Consensus 31 ~~~~~p~~i~~~~--~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g 108 (359)
.++..|.+|+++| +|+ ||+....++|.++|++++.++.+. .....|.+|+++++++
T Consensus 134 ~~~~~P~~lavdp~~~g~-Lyv~d~~~~I~~id~~~~~v~~~~---------------------~~~~~P~~ia~d~~G~ 191 (430)
T 3tc9_A 134 GGFGGAVWLSFDPKNHNH-LYLVGEQHPTRLIDFEKEYVSTVY---------------------SGLSKVRTICWTHEAD 191 (430)
T ss_dssp BCCSCCCEEEEETTEEEE-EEEEEBTEEEEEEETTTTEEEEEE---------------------CCCSCEEEEEECTTSS
T ss_pred cCCCCCCEEEECCCCCCe-EEEEeCCCcEEEEECCCCEEEEEe---------------------cCCCCcceEEEeCCCC
Confidence 3578999999996 466 665544489999999987555442 2345699999999444
Q ss_pred eEEEEeCCC-----cEEEEeCCCCeE--EEEeecCCCccccccceEEEeC-CCCEEEEEeCCCccccccceeeeeecCCC
Q 018242 109 DLYIADAYF-----GLLKVGPEGGLA--TAVATQSEGIPFRFCNSLDIDQ-STGIIYFTDSSSQFQRRNHISVILSGDKT 180 (359)
Q Consensus 109 ~l~v~~~~~-----~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~d~-~g~~l~v~d~~~~~~~~~~~~~~~~~~~~ 180 (359)
.||+++..+ .++.++.+++.. ..+. ....|+++++++ +|+ ||++|.. .
T Consensus 192 ~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~------~~~~p~giavdp~~g~-lyv~d~~-----------------~ 247 (430)
T 3tc9_A 192 SMIITNDQNNNDRPNNYILTRESGFKVITELT------KGQNCNGAETHPINGE-LYFNSWN-----------------A 247 (430)
T ss_dssp EEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE------ECSSCCCEEECTTTCC-EEEEETT-----------------T
T ss_pred EEEEEeCCCCcccceEEEEeCCCceeeeeeec------cCCCceEEEEeCCCCE-EEEEECC-----------------C
Confidence 599998632 366677654432 1221 245789999999 787 9999765 4
Q ss_pred ceEEEEeCCCCcEEEEe--CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC--CCcceeEeecC------------
Q 018242 181 GRLMKYDPATKQVTVLL--GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS--KAGTIEIVAQL------------ 244 (359)
Q Consensus 181 g~v~~~d~~~~~~~~~~--~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~--~~~~~~~~~~~------------ 244 (359)
+.|++++++++....+. .....|+++++++++++|||++..+++|++++.+.. .......+...
T Consensus 248 ~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~ 327 (430)
T 3tc9_A 248 GQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGK 327 (430)
T ss_dssp TEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGG
T ss_pred CEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCc
Confidence 58999999877653322 234579999999999999999999999999987642 11111222211
Q ss_pred ---CCCCC-ceEE--------CCCCCEEEEEecCCCccccccccCCccceeeecCCccceeeeeecccccCcceEEEEEC
Q 018242 245 ---PGFPD-NIKR--------SPRGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRIS 312 (359)
Q Consensus 245 ---~~~p~-~i~~--------d~~G~lwv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (359)
-..|. ++++ |++|+||++...++ .+.+++
T Consensus 328 ~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~---------------------------------------~I~~i~ 368 (430)
T 3tc9_A 328 KARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENH---------------------------------------CIRILT 368 (430)
T ss_dssp GCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGT---------------------------------------EEEEEC
T ss_pred ceEeCCCcceEEEccccccccCCCCeEEEEECCCc---------------------------------------EEEEEC
Confidence 01366 6777 56799999998654 344555
Q ss_pred CCCCEEEEEEc----c----CC-----ceeeceEEEEEe--CCEEEEecCCCCeEEEEcCCC
Q 018242 313 EQGNVLEILEE----I----GR-----KMWRSISEVEEK--DGNLWIGSVNMPYAGLYNYSS 359 (359)
Q Consensus 313 ~~g~~~~~~~~----~----~g-----~~~~~~~~~~~~--~g~l~ig~~~~~~l~~~~~~~ 359 (359)
++|.+...... . +| ..+..+.++..+ ++.||++...+++|.+++++.
T Consensus 369 ~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e~ 430 (430)
T 3tc9_A 369 PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYEE 430 (430)
T ss_dssp TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEECC
T ss_pred CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccCC
Confidence 55544333322 0 12 124467777766 589999999999999998763
No 19
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.81 E-value=3.1e-18 Score=158.91 Aligned_cols=211 Identities=16% Similarity=0.142 Sum_probs=155.0
Q ss_pred eCCCCCCceEEEcc-CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCC
Q 018242 30 IEGAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNG 108 (359)
Q Consensus 30 ~~~~~~p~~i~~~~-~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g 108 (359)
+..+..|.++++++ +++++|++..+++|+++++++...+.+. ......|.|+++++.++
T Consensus 112 ~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~--------------------~~~~~~p~glavd~~~g 171 (386)
T 3v65_B 112 LNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV--------------------STGLESPGGLAVDWVHD 171 (386)
T ss_dssp ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE--------------------CSSCSCCCCEEEETTTT
T ss_pred ecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE--------------------eCCCCCccEEEEEeCCC
Confidence 34577899999995 6777888999999999999886444331 22234688999998789
Q ss_pred eEEEEeCCC-cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEe
Q 018242 109 DLYIADAYF-GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYD 187 (359)
Q Consensus 109 ~l~v~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 187 (359)
+||+++... .|.++++++...+.+.. .....|++|++||++++||++|.+. .+.|++++
T Consensus 172 ~lY~~d~~~~~I~~~~~dg~~~~~l~~----~~l~~P~giavdp~~g~ly~td~~~----------------~~~I~r~~ 231 (386)
T 3v65_B 172 KLYWTDSGTSRIEVANLDGAHRKVLLW----QSLEKPRAIALHPMEGTIYWTDWGN----------------TPRIEASS 231 (386)
T ss_dssp EEEEEETTTTEEEECBTTSCSCEEEEC----SSCSCEEEEEEETTTTEEEEEECSS----------------SCEEEEEE
T ss_pred eEEEEcCCCCeEEEEeCCCCceEEeec----CCCCCCcEEEEEcCCCeEEEeccCC----------------CCEEEEEe
Confidence 999998754 68899988765444432 1345789999998766699997641 25799999
Q ss_pred CCCCcEEEE-eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-CCCCCCceEECCCCCEEEEEec
Q 018242 188 PATKQVTVL-LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGGFWVGIHS 265 (359)
Q Consensus 188 ~~~~~~~~~-~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwv~~~~ 265 (359)
+++...+.+ ...+..|+||+++++++.|||+++..++|+++++++.. .+.+.. ....|.+|+++ +++||++.+.
T Consensus 232 ~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~P~giav~-~~~ly~td~~ 307 (386)
T 3v65_B 232 MDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH---RKAVISQGLPHPFAITVF-EDSLYWTDWH 307 (386)
T ss_dssp TTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS---CEEEECSSCSSEEEEEEE-TTEEEEEETT
T ss_pred CCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe---eEEEEECCCCCceEEEEE-CCEEEEeeCC
Confidence 986544444 35577899999999888999999999999999986532 233332 23469999995 5679999987
Q ss_pred CCCccccccccCC-ccceeeecCCc
Q 018242 266 RRKGISKLVLSFP-WIGNVLIKLPI 289 (359)
Q Consensus 266 ~~~~~~~~~~~~~-~~g~~~~~~~~ 289 (359)
.+. +..++ .+|+....+..
T Consensus 308 ~~~-----V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 308 TKS-----INSANKFTGKNQEIIRN 327 (386)
T ss_dssp TTE-----EEEEETTTCCSCEEEEC
T ss_pred CCe-----EEEEECCCCcceEEEcc
Confidence 765 55554 46665554443
No 20
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.81 E-value=7.7e-18 Score=148.14 Aligned_cols=208 Identities=13% Similarity=0.138 Sum_probs=148.9
Q ss_pred CCCceEEEccC-CCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE
Q 018242 34 IGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI 112 (359)
Q Consensus 34 ~~p~~i~~~~~-G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v 112 (359)
..|++++++++ ++++|++...+.|+++++++.....+ .......|.++++++++++||+
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~--------------------~~~~~~~p~~ia~d~~~~~lyv 95 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTI--------------------IRQDLGSPEGIALDHLGRTIFW 95 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEE--------------------ECTTCCCEEEEEEETTTTEEEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEE--------------------EECCCCCccEEEEEecCCeEEE
Confidence 57899999985 56666777789999999987633322 1122356899999987799999
Q ss_pred EeCCC-cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCC
Q 018242 113 ADAYF-GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATK 191 (359)
Q Consensus 113 ~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 191 (359)
++... .|.+++.++...+.+... ....|+++++|+++++||+++... ..+.|+++++++.
T Consensus 96 ~d~~~~~I~~~~~~g~~~~~~~~~----~~~~P~~i~vd~~~g~lyv~~~~~---------------~~~~I~~~~~dg~ 156 (267)
T 1npe_A 96 TDSQLDRIEVAKMDGTQRRVLFDT----GLVNPRGIVTDPVRGNLYWTDWNR---------------DNPKIETSHMDGT 156 (267)
T ss_dssp EETTTTEEEEEETTSCSCEEEECS----SCSSEEEEEEETTTTEEEEEECCS---------------SSCEEEEEETTSC
T ss_pred EECCCCEEEEEEcCCCCEEEEEEC----CCCCccEEEEeeCCCEEEEEECCC---------------CCcEEEEEecCCC
Confidence 98754 699999987654443321 235789999999655599997531 1357889888754
Q ss_pred cEEEEe-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCCCcc
Q 018242 192 QVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGI 270 (359)
Q Consensus 192 ~~~~~~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~~~ 270 (359)
..+.+. .....|++++++++++.|||++...++|+++++++. ....+......|.++++| ++++|++.+.++.
T Consensus 157 ~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~---~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~-- 230 (267)
T 1npe_A 157 NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP---GRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNS-- 230 (267)
T ss_dssp CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE---EEEEEEECCCSEEEEEEE-TTEEEEEETTTTE--
T ss_pred CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC---ceEEEecCCCCceEEEEe-CCEEEEEECCCCe--
Confidence 444433 456689999999998899999999999999997642 222333333468999998 5889999987664
Q ss_pred ccccccCCc-cceeeecCCc
Q 018242 271 SKLVLSFPW-IGNVLIKLPI 289 (359)
Q Consensus 271 ~~~~~~~~~-~g~~~~~~~~ 289 (359)
+.++++ .|+.++.++.
T Consensus 231 ---v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 231 ---VIAMDLAISKEMDTFHP 247 (267)
T ss_dssp ---EEEEETTTTEEEEEECC
T ss_pred ---EEEEeCCCCCceEEEcc
Confidence 555554 4676666654
No 21
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.80 E-value=1.2e-17 Score=150.69 Aligned_cols=207 Identities=13% Similarity=0.119 Sum_probs=148.4
Q ss_pred CCCCCCceEEEccC-CCeeEEecCCCEEEEEEcCC----cceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEec
Q 018242 31 EGAIGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQ----RRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNK 105 (359)
Q Consensus 31 ~~~~~p~~i~~~~~-G~~l~~~~~~~~i~~~d~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~ 105 (359)
+.+..|++++++++ ++++|++..+++|+++++++ .....+ +......|.||++|+
T Consensus 27 ~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~--------------------~~~~~~~p~glavd~ 86 (316)
T 1ijq_A 27 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV--------------------ISRDIQAPDGLAVDW 86 (316)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE--------------------ECSSCSCCCEEEEET
T ss_pred cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEE--------------------EeCCCCCcCEEEEee
Confidence 45678999999975 67788888889999999886 211111 112235689999997
Q ss_pred CCCeEEEEeCC-CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEE
Q 018242 106 TNGDLYIADAY-FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLM 184 (359)
Q Consensus 106 ~~g~l~v~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 184 (359)
.+++||+++.. +.|.++++++...+.+... ....|+++++||++++||+++.+. .+.|+
T Consensus 87 ~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~----~~~~P~~iavdp~~g~ly~~d~~~----------------~~~I~ 146 (316)
T 1ijq_A 87 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIK 146 (316)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSSEEEEEEC----TTCCEEEEEEETTTTEEEEEECSS----------------SCEEE
T ss_pred cCCeEEEEECCCCEEEEEeCCCCceEEEEEC----CCCCcceEEeCCCCCEEEEEccCC----------------CCeEE
Confidence 68999999875 4699999987765544431 235789999998655699997541 25799
Q ss_pred EEeCCCCcEEEEe-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec---CCCCCCceEECCCCCEE
Q 018242 185 KYDPATKQVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ---LPGFPDNIKRSPRGGFW 260 (359)
Q Consensus 185 ~~d~~~~~~~~~~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~p~~i~~d~~G~lw 260 (359)
++++++...+.+. ..+..|+|++++++++.|||+++..++|+++++++.. .+.+.. ....|.+|++|. |++|
T Consensus 147 ~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~---~~~~~~~~~~~~~P~giav~~-~~ly 222 (316)
T 1ijq_A 147 KGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFE-DKVF 222 (316)
T ss_dssp EEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEECTTTTSSEEEEEEET-TEEE
T ss_pred EEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc---eEEEeecCCccCCcEEEEEEC-CEEE
Confidence 9998854444443 4577899999999988999999999999999987532 333433 224689999974 7899
Q ss_pred EEEecCCCccccccccCCc-cceeeec
Q 018242 261 VGIHSRRKGISKLVLSFPW-IGNVLIK 286 (359)
Q Consensus 261 v~~~~~~~~~~~~~~~~~~-~g~~~~~ 286 (359)
++.+..+. +.++++ +|+....
T Consensus 223 ~~d~~~~~-----V~~~~~~~g~~~~~ 244 (316)
T 1ijq_A 223 WTDIINEA-----IFSANRLTGSDVNL 244 (316)
T ss_dssp EEETTTTE-----EEEEETTTCCCCEE
T ss_pred EEECCCCe-----EEEEeCCCCcceEE
Confidence 99987665 555543 5554433
No 22
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.80 E-value=4e-17 Score=149.03 Aligned_cols=211 Identities=16% Similarity=0.197 Sum_probs=139.9
Q ss_pred CCCceEEEccCCCeeEEecC---CC--EEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCC
Q 018242 34 IGPESLAFDALGEGPYTGVS---DG--RIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNG 108 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~---~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g 108 (359)
..|++++++++|+ +|++.. ++ +|+.++ +++...|+... . ........|+++++++ ++
T Consensus 17 ~~p~~va~~~~g~-~~v~~~~~~~~~~~l~~~~--~g~~~~~p~~~--------~------~~~~~~~~p~gv~~d~-~g 78 (343)
T 2qe8_A 17 LAPGNITLTPDGR-LFLSLHQFYQPEMQVAELT--QDGLIPFPPQS--------G------NAIITFDTVLGIKSDG-NG 78 (343)
T ss_dssp SCEEEEEECTTSC-EEEEECGGGCCSCSEEEEE--TTEEEESCCCC--------S------SCCCCCSCEEEEEECS-SS
T ss_pred CCcceEEECCCCC-EEEEeCCCCCCceEEEEEC--CCCeecCCCcc--------c------CcccceeEeeEEEEcC-CC
Confidence 6999999999999 676642 23 688887 44444332100 0 0012235689999999 79
Q ss_pred eEEEEeCC------CcEEEEeCCCCeEEEEeecC--CCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCC
Q 018242 109 DLYIADAY------FGLLKVGPEGGLATAVATQS--EGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKT 180 (359)
Q Consensus 109 ~l~v~~~~------~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~ 180 (359)
+||+++.. ..|.++|++++++....... ...+...+++++++++++++|++|.+.. ..
T Consensus 79 ~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~--------------~~ 144 (343)
T 2qe8_A 79 IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD--------------DK 144 (343)
T ss_dssp EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG--------------GG
T ss_pred cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC--------------CC
Confidence 99999864 57999999988754332211 1123356899999986545999986311 13
Q ss_pred ceEEEEeCCCCcEEEEeCC------------------------------CCCCceEEEccCCCEEEEEecCCCEEEEEEc
Q 018242 181 GRLMKYDPATKQVTVLLGN------------------------------LSFPNGVALSEDGNYILLAETTSCRILRYWL 230 (359)
Q Consensus 181 g~v~~~d~~~~~~~~~~~~------------------------------~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~ 230 (359)
+.|+++|+++++...+... ...++||++++|++.||+++....+|++++.
T Consensus 145 ~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~ 224 (343)
T 2qe8_A 145 AALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKS 224 (343)
T ss_dssp CEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEH
T ss_pred CeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEH
Confidence 4678888776655443211 0246899999999999999999999999985
Q ss_pred C---CCCCcce------eEeecCCCCCCceEECCCCCEEEEEecCCCccccccccCCc-cce
Q 018242 231 K---TSKAGTI------EIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFPW-IGN 282 (359)
Q Consensus 231 ~---~~~~~~~------~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~-~g~ 282 (359)
+ ....... ..... .+.|+++++|++|++|++....+. +.++++ +|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~g~-~g~pdgia~d~~G~l~va~~~~~~-----V~~~d~~~G~ 280 (343)
T 2qe8_A 225 ADLSNLQLTDAELGSKIERYSE-KPICDGISIDKDHNIYVGDLAHSA-----IGVITSADRA 280 (343)
T ss_dssp HHHTCTTCCHHHHHTTCEEEEE-CCSCSCEEECTTCCEEEEEGGGTE-----EEEEETTTTE
T ss_pred HHhcCCCCChhhhhcceEeccc-CCCCceEEECCCCCEEEEccCCCe-----EEEEECCCCC
Confidence 3 1111111 11111 246999999999999999987654 555555 554
No 23
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.79 E-value=1.4e-17 Score=151.18 Aligned_cols=197 Identities=15% Similarity=0.107 Sum_probs=136.0
Q ss_pred CCCCCceEEEccCCCeeEEec-CCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeE
Q 018242 32 GAIGPESLAFDALGEGPYTGV-SDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDL 110 (359)
Q Consensus 32 ~~~~p~~i~~~~~G~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l 110 (359)
....|++++++++|+ +|++. .++.|.++|+.+.+....-... ........|.+|++ . ++++
T Consensus 82 ~~~~p~~i~~~~~g~-lyv~~~~~~~v~~iD~~t~~~~~~i~~g---------------~~~~~~~~p~~i~~-~-~~~l 143 (328)
T 3dsm_A 82 GFTSPRYIHFLSDEK-AYVTQIWDYRIFIINPKTYEITGYIECP---------------DMDMESGSTEQMVQ-Y-GKYV 143 (328)
T ss_dssp CCSSEEEEEEEETTE-EEEEEBSCSEEEEEETTTTEEEEEEECT---------------TCCTTTCBCCCEEE-E-TTEE
T ss_pred CCCCCcEEEEeCCCe-EEEEECCCCeEEEEECCCCeEEEEEEcC---------------CccccCCCcceEEE-E-CCEE
Confidence 357899999999996 77776 7799999999987544221000 00011126888998 3 8999
Q ss_pred EEEeC--CCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeC
Q 018242 111 YIADA--YFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDP 188 (359)
Q Consensus 111 ~v~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 188 (359)
|+++. .+.|.++|++++++...... ...|++++++++|+ +|++..+.... ..+ ....+.|+++|+
T Consensus 144 yv~~~~~~~~v~viD~~t~~~~~~i~~-----g~~p~~i~~~~dG~-l~v~~~~~~~~-~~~------~~~~~~v~~id~ 210 (328)
T 3dsm_A 144 YVNCWSYQNRILKIDTETDKVVDELTI-----GIQPTSLVMDKYNK-MWTITDGGYEG-SPY------GYEAPSLYRIDA 210 (328)
T ss_dssp EEEECTTCCEEEEEETTTTEEEEEEEC-----SSCBCCCEECTTSE-EEEEBCCBCTT-CSS------CBCCCEEEEEET
T ss_pred EEEcCCCCCEEEEEECCCCeEEEEEEc-----CCCccceEEcCCCC-EEEEECCCccC-Ccc------ccCCceEEEEEC
Confidence 99986 45699999998876543321 23578999999999 99996542100 000 001357999999
Q ss_pred CCCcEEEEe--CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecC-CCCCCceEECC-CCCEEEEE
Q 018242 189 ATKQVTVLL--GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL-PGFPDNIKRSP-RGGFWVGI 263 (359)
Q Consensus 189 ~~~~~~~~~--~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~~i~~d~-~G~lwv~~ 263 (359)
+++++.... .....|++++++||++.+|+++. .|+++|.+..+.... .+... ...|++|++|+ +|+||++.
T Consensus 211 ~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~-~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 211 ETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVR-PFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp TTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSS-CSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred CCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCceeee-eeecCCCCceEEEEEcCCCCeEEEEc
Confidence 988766332 22347999999999999999875 799999865543211 11111 35699999998 78999998
No 24
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.79 E-value=9e-18 Score=151.50 Aligned_cols=210 Identities=16% Similarity=0.157 Sum_probs=151.3
Q ss_pred CCCCCCceEEEcc-CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCe
Q 018242 31 EGAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGD 109 (359)
Q Consensus 31 ~~~~~p~~i~~~~-~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~ 109 (359)
+++..|.++++++ +|+++|++...+.|+++++++...... ........|.|+++++.+++
T Consensus 32 ~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~-------------------~~~~~l~~p~glavd~~~g~ 92 (318)
T 3sov_A 32 GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQN-------------------VVVSGLLSPDGLACDWLGEK 92 (318)
T ss_dssp EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCE-------------------EEEECCSCCCEEEEETTTTE
T ss_pred cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEE-------------------EEcCCCCCccEEEEEcCCCe
Confidence 3345688999997 578888999999999999987521100 11122356899999987999
Q ss_pred EEEEeCCC-cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeC
Q 018242 110 LYIADAYF-GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDP 188 (359)
Q Consensus 110 l~v~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 188 (359)
||+++... .|.++++++...+.+.. .....|++|++|+.+++||++|.+ ..+.|+++++
T Consensus 93 ly~~d~~~~~I~~~~~dG~~~~~l~~----~~~~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~ 152 (318)
T 3sov_A 93 LYWTDSETNRIEVSNLDGSLRKVLFW----QELDQPRAIALDPSSGFMYWTDWG----------------EVPKIERAGM 152 (318)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEEC----SSCSSEEEEEEEGGGTEEEEEECS----------------SSCEEEEEET
T ss_pred EEEEECCCCEEEEEECCCCcEEEEEe----CCCCCccEEEEeCCCCEEEEEecC----------------CCCEEEEEEc
Confidence 99998754 69999998765544432 134578999999865559999754 1357999998
Q ss_pred CCCcEEEE-eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-CCCCCCceEECCCCCEEEEEecC
Q 018242 189 ATKQVTVL-LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGGFWVGIHSR 266 (359)
Q Consensus 189 ~~~~~~~~-~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwv~~~~~ 266 (359)
++...+.+ ...+..|+||+++++++.|||+++..++|+++++++.. .+.+.. ....|.++++|. +.+|++.+..
T Consensus 153 dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~P~glav~~-~~lywtd~~~ 228 (318)
T 3sov_A 153 DGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN---RQAVVKGSLPHPFALTLFE-DILYWTDWST 228 (318)
T ss_dssp TSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECSCCSCEEEEEEET-TEEEEEETTT
T ss_pred CCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc---eEEEecCCCCCceEEEEeC-CEEEEEecCC
Confidence 86444443 35677899999999888999999999999999987532 333433 335699999985 5688888876
Q ss_pred CCccccccccCCc-cceeeecCC
Q 018242 267 RKGISKLVLSFPW-IGNVLIKLP 288 (359)
Q Consensus 267 ~~~~~~~~~~~~~-~g~~~~~~~ 288 (359)
+. +..+++ +|+....+.
T Consensus 229 ~~-----V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 229 HS-----ILACNKYTGEGLREIH 246 (318)
T ss_dssp TE-----EEEEETTTCCSCEEEE
T ss_pred Ce-----EEEEECCCCCceEEEe
Confidence 65 555554 566554443
No 25
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.77 E-value=1.2e-16 Score=148.79 Aligned_cols=210 Identities=13% Similarity=0.137 Sum_probs=150.7
Q ss_pred eCCCCCCceEEEcc-CCCeeEEecCCCEEEEEEcCCcc----eEEEeecCCCCCCCCCCcccccccccccCCcceEEEEe
Q 018242 30 IEGAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRR----WLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFN 104 (359)
Q Consensus 30 ~~~~~~p~~i~~~~-~G~~l~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~ 104 (359)
+..+..|.+|++++ +++++|++..+++|+++++++.. ... ........|.||++|
T Consensus 108 ~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~--------------------~~~~~~~~p~glavD 167 (400)
T 3p5b_L 108 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT--------------------VISRDIQAPDGLAVD 167 (400)
T ss_dssp ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEE--------------------EECSSCSCEEEEEEE
T ss_pred ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceE--------------------EEeCCCCCcccEEEE
Confidence 34567999999997 57778889999999999987631 111 112234568999999
Q ss_pred cCCCeEEEEeCCC-cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceE
Q 018242 105 KTNGDLYIADAYF-GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRL 183 (359)
Q Consensus 105 ~~~g~l~v~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 183 (359)
+.+++||+++... .|.++++++...+.+... ....|++|++||.+++||++|.+. .+.|
T Consensus 168 ~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~----~~~~P~~iavdp~~g~ly~td~~~----------------~~~I 227 (400)
T 3p5b_L 168 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWGT----------------PAKI 227 (400)
T ss_dssp TTTTEEEEEETTTTEEEEECTTTCSEEEEEEC----SSCCEEEEEEETTTTEEEEEECSS----------------SCCE
T ss_pred ecCCceEEEECCCCeEEEEeCCCCceEEEEeC----CCCCcceEEEecccCeEEEEeCCC----------------CCEE
Confidence 8789999998754 599999998766555431 345789999998655699997641 2479
Q ss_pred EEEeCCCCcEEEE-eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec---CCCCCCceEECCCCCE
Q 018242 184 MKYDPATKQVTVL-LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ---LPGFPDNIKRSPRGGF 259 (359)
Q Consensus 184 ~~~d~~~~~~~~~-~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~p~~i~~d~~G~l 259 (359)
++++.++...+.+ ...+..|+||+++++++.|||+++..++|+++++++.. .+.+.. .-..|.+++++. ++|
T Consensus 228 ~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~l~~P~gl~v~~-~~l 303 (400)
T 3p5b_L 228 KKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFE-DKV 303 (400)
T ss_dssp EEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC---CEEEEECSSTTSSEEEEEEET-TEE
T ss_pred EEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc---cEEEEeCCCCCCCCEEEEEeC-CEE
Confidence 9999886544444 35568899999999888999999999999999987642 233332 124588999964 568
Q ss_pred EEEEecCCCccccccccCC-ccceeeecCC
Q 018242 260 WVGIHSRRKGISKLVLSFP-WIGNVLIKLP 288 (359)
Q Consensus 260 wv~~~~~~~~~~~~~~~~~-~~g~~~~~~~ 288 (359)
|++.+..+. +..++ .+|+....+.
T Consensus 304 ywtd~~~~~-----V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 304 FWTDIINEA-----IFSANRLTGSDVNLLA 328 (400)
T ss_dssp EEEESSSCS-----EEEEESSSCCCCEEEE
T ss_pred EEecCCCCe-----EEEEEcCCCCceEEEe
Confidence 888887665 55554 4666555443
No 26
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.77 E-value=2.9e-16 Score=137.97 Aligned_cols=229 Identities=14% Similarity=0.114 Sum_probs=151.8
Q ss_pred eeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCCC-cEEEEeCC
Q 018242 47 GPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYF-GLLKVGPE 125 (359)
Q Consensus 47 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~~-~i~~~~~~ 125 (359)
.|+++.. +.|++++.++...+.+.. . . .+......|.++++++++++||+++... .|.+++++
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~------------~-~--~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~ 66 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEA------------K-A--FLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLH 66 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGC------------E-E--EEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESS
T ss_pred EEEEEcC-CeEEEEEecCcccccccc------------e-e--eecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecC
Confidence 4555554 489999988753211000 0 0 0111124578999999789999998754 59999998
Q ss_pred CCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEe-CCCCCCc
Q 018242 126 GGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLL-GNLSFPN 204 (359)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~p~ 204 (359)
++..+.+.. .....|+++++|++++++|+++.. .+.|.+++.++...+.+. .....|+
T Consensus 67 g~~~~~~~~----~~~~~p~~ia~d~~~~~lyv~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~P~ 125 (267)
T 1npe_A 67 GGEPTTIIR----QDLGSPEGIALDHLGRTIFWTDSQ-----------------LDRIEVAKMDGTQRRVLFDTGLVNPR 125 (267)
T ss_dssp SCCCEEEEC----TTCCCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECSSCSSEE
T ss_pred CCCcEEEEE----CCCCCccEEEEEecCCeEEEEECC-----------------CCEEEEEEcCCCCEEEEEECCCCCcc
Confidence 876544332 123578999999975559999764 347999998754444333 3457899
Q ss_pred eEEEccCCCEEEEEecC--CCEEEEEEcCCCCCcceeEeec-CCCCCCceEECCCC-CEEEEEecCCCccccccccCCcc
Q 018242 205 GVALSEDGNYILLAETT--SCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRG-GFWVGIHSRRKGISKLVLSFPWI 280 (359)
Q Consensus 205 gia~~~d~~~l~v~~~~--~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G-~lwv~~~~~~~~~~~~~~~~~~~ 280 (359)
+++++++++.+||++.. .++|+++++++.. .+.+.. ....|.++++|+++ +||++....+
T Consensus 126 ~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~---~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~------------- 189 (267)
T 1npe_A 126 GIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN---RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTH------------- 189 (267)
T ss_dssp EEEEETTTTEEEEEECCSSSCEEEEEETTSCC---CEEEECTTCSCEEEEEEETTTTEEEEEETTTT-------------
T ss_pred EEEEeeCCCEEEEEECCCCCcEEEEEecCCCC---cEEEEECCCCCCcEEEEcCCCCEEEEEECCCC-------------
Confidence 99999987889999977 5799999986532 223332 22469999999964 7999987643
Q ss_pred ceeeecCCccceeeeeecccccCcceEEEEECCCCCEEEEEEccCCceeeceEEEEEeCCEEEEecCCCCeEEEEcCC
Q 018242 281 GNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEKDGNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 281 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~l~ig~~~~~~l~~~~~~ 358 (359)
.+.+++.++.....+.. + ...+.++..+++.||++++.++.|.+++.+
T Consensus 190 --------------------------~I~~~~~~g~~~~~~~~--~--~~~P~gi~~d~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 190 --------------------------RAECLNPAQPGRRKVLE--G--LQYPFAVTSYGKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp --------------------------EEEEEETTEEEEEEEEE--C--CCSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred --------------------------EEEEEecCCCceEEEec--C--CCCceEEEEeCCEEEEEECCCCeEEEEeCC
Confidence 34445555443333222 1 123345556688899988888888888764
No 27
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.76 E-value=1.9e-15 Score=137.22 Aligned_cols=218 Identities=14% Similarity=0.160 Sum_probs=148.1
Q ss_pred EEEEeeCCCCCCceEEEccCCCeeEEecC-------CCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCc
Q 018242 25 VVQYQIEGAIGPESLAFDALGEGPYTGVS-------DGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGR 97 (359)
Q Consensus 25 ~~~~~~~~~~~p~~i~~~~~G~~l~~~~~-------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (359)
......+ ..|.+++++++|+.+|++.. ++.|+.||+.+++.... + .....
T Consensus 34 ~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~--------------------~-~~~~~ 90 (353)
T 3vgz_A 34 MLRKAVG--KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQA--------------------I-HNDLK 90 (353)
T ss_dssp EEEEEEE--SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEE--------------------E-EESSC
T ss_pred hhhhhhc--cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEE--------------------E-ecCCC
Confidence 3455555 48999999999988888774 45899999988754321 1 12345
Q ss_pred ceEEEEecCCCeEEEEeCC-CcEEEEeCCCCeEEEEeecCCCc-----cccccceEEEeCCCCEEEEEeCCCccccccce
Q 018242 98 PLGLCFNKTNGDLYIADAY-FGLLKVGPEGGLATAVATQSEGI-----PFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHI 171 (359)
Q Consensus 98 p~gi~~~~~~g~l~v~~~~-~~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~ 171 (359)
|.+++++++++.+|+++.. +.|..+|.++++........... ....+++++++++|+++|+++.+
T Consensus 91 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--------- 161 (353)
T 3vgz_A 91 PFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG--------- 161 (353)
T ss_dssp CCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES---------
T ss_pred cceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC---------
Confidence 7889999955669998765 45999999988764333221110 11237889999999989998532
Q ss_pred eeeeecCCCceEEEEeCCCCcEEEEeC-CCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec----CCC
Q 018242 172 SVILSGDKTGRLMKYDPATKQVTVLLG-NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ----LPG 246 (359)
Q Consensus 172 ~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~----~~~ 246 (359)
..+.|+.+|+++++...... ....|.+++++||++.+|++.. ++.|++||+...+.. ..+.. ...
T Consensus 162 -------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~--~~~~~~~~~~~~ 231 (353)
T 3vgz_A 162 -------KESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA-DGELITIDTADNKIL--SRKKLLDDGKEH 231 (353)
T ss_dssp -------SSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEEE--EEEECCCSSSCC
T ss_pred -------CCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC-CCeEEEEECCCCeEE--EEEEcCCCCCCc
Confidence 24579999998887765544 4456899999999999898875 679999997654221 11111 122
Q ss_pred CCCceEECCCCC-EEEEEecCCCccccccccCC-ccceeeecCCc
Q 018242 247 FPDNIKRSPRGG-FWVGIHSRRKGISKLVLSFP-WIGNVLIKLPI 289 (359)
Q Consensus 247 ~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~-~~g~~~~~~~~ 289 (359)
.+.+++++++|+ +|++....+. +..++ .+++.+..++.
T Consensus 232 ~~~~~~~s~dg~~l~~~~~~~~~-----v~~~d~~~~~~~~~~~~ 271 (353)
T 3vgz_A 232 FFINISLDTARQRAFITDSKAAE-----VLVVDTRNGNILAKVAA 271 (353)
T ss_dssp CEEEEEEETTTTEEEEEESSSSE-----EEEEETTTCCEEEEEEC
T ss_pred ccceEEECCCCCEEEEEeCCCCE-----EEEEECCCCcEEEEEEc
Confidence 356689999997 7887765443 45554 35666665554
No 28
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.76 E-value=2.9e-16 Score=158.99 Aligned_cols=239 Identities=11% Similarity=0.166 Sum_probs=167.5
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCe-EEEEe
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGD-LYIAD 114 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~-l~v~~ 114 (359)
-.+++.|++|+ +|+++.+++|.++++.++.++.+...... + ...........++.++ +++ ||+++
T Consensus 359 V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~------~------~~~l~~~~v~~i~~d~-~g~~lWigt 424 (795)
T 4a2l_A 359 VSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDE------S------ARGIGSNNIKAVYVDE-KKSLVYIGT 424 (795)
T ss_dssp EEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------------------CCSCSCEEEEEEET-TTTEEEEEE
T ss_pred eEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCC------c------ccCCCCccEEEEEEcC-CCCEEEEEe
Confidence 35788999999 99999988999999998877776421100 0 0000123456788888 888 99999
Q ss_pred CCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEE
Q 018242 115 AYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVT 194 (359)
Q Consensus 115 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 194 (359)
..+||+++++++++++.+.......+...+..+..|++|+ ||++.. ++|+++++++++++
T Consensus 425 ~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lwigt~-------------------~Gl~~~~~~~~~~~ 484 (795)
T 4a2l_A 425 HAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGN-LWLGTL-------------------SALVRFNPEQRSFT 484 (795)
T ss_dssp TTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSC-EEEEES-------------------SCEEEEETTTTEEE
T ss_pred CcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCC-EEEEec-------------------CceeEEeCCCCeEE
Confidence 8789999999998877654321222334678899999999 999932 36999999988776
Q ss_pred EEeCC-----C--CCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEee---cCCCC----CCceEECCCCCEE
Q 018242 195 VLLGN-----L--SFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA---QLPGF----PDNIKRSPRGGFW 260 (359)
Q Consensus 195 ~~~~~-----~--~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~----p~~i~~d~~G~lw 260 (359)
.+... . .....++.+++|+ +|++.. ++|++++.+.... .+. ...++ ...|+.|++|+||
T Consensus 485 ~~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt~--~Gl~~~~~~~~~~----~~~~~~~~~~l~~~~i~~i~~d~~g~lW 557 (795)
T 4a2l_A 485 TIEKEKDGTPVVSKQITTLFRDSHKR-LWIGGE--EGLSVFKQEGLDI----QKASILPVSNVTKLFTNCIYEASNGIIW 557 (795)
T ss_dssp ECCBCTTCCBCCCCCEEEEEECTTCC-EEEEES--SCEEEEEEETTEE----EECCCSCSCGGGGSCEEEEEECTTSCEE
T ss_pred EccccccccccCCceEEEEEECCCCC-EEEEeC--CceEEEeCCCCeE----EEecCCCCCCCCCCeeEEEEECCCCCEE
Confidence 65321 1 2235677777776 676654 6899998754322 121 11122 2347889999999
Q ss_pred EEEecCCCccccccccCCccceeeecCCccceeeeeecccccCcceEEEEECCCCCEEEEEEccCCceeeceEEEEEe-C
Q 018242 261 VGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEK-D 339 (359)
Q Consensus 261 v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~ 339 (359)
+++.. ++.+++++...+..|...+|++...+..+..+ +
T Consensus 558 igT~~-----------------------------------------Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~ 596 (795)
T 4a2l_A 558 VGTRE-----------------------------------------GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSF 596 (795)
T ss_dssp EEESS-----------------------------------------CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTT
T ss_pred EEeCC-----------------------------------------CceeECCCCCcEEEeCCCCCCchhheEEEEECCC
Confidence 99863 36678877777777776778777777777766 7
Q ss_pred CEEEEecCCCCeEEEEcCC
Q 018242 340 GNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 340 g~l~ig~~~~~~l~~~~~~ 358 (359)
|+||+++ .++|.+++..
T Consensus 597 g~lWi~t--~~Gl~~~~~~ 613 (795)
T 4a2l_A 597 GRLWLST--NRGISCFNPE 613 (795)
T ss_dssp SCEEEEE--TTEEEEEETT
T ss_pred CCEEEEc--CCceEEEcCC
Confidence 8999999 4678887754
No 29
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.76 E-value=3.7e-16 Score=138.63 Aligned_cols=196 Identities=13% Similarity=0.162 Sum_probs=140.1
Q ss_pred CCCCceEEEccCCCeeEEec-CCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEE
Q 018242 33 AIGPESLAFDALGEGPYTGV-SDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLY 111 (359)
Q Consensus 33 ~~~p~~i~~~~~G~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~ 111 (359)
...|.+++++++|+ +|++. .+++|++++++ ++++.+. .......|.++++++ ++++|
T Consensus 56 ~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~-------------------~~~~~~~~~~i~~~~-~g~l~ 113 (299)
T 2z2n_A 56 DAKVMCLTISSDGE-VWFTENAANKIGRITKK-GIIKEYT-------------------LPNPDSAPYGITEGP-NGDIW 113 (299)
T ss_dssp TCCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEE-------------------CSSTTCCEEEEEECT-TSCEE
T ss_pred cCceeeEEECCCCC-EEEeCCCCCeEEEECCC-CcEEEEe-------------------CCCcCCCceeeEECC-CCCEE
Confidence 46899999999999 66554 46899999987 4454442 111234588999998 89999
Q ss_pred EEeCC-CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCC
Q 018242 112 IADAY-FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPAT 190 (359)
Q Consensus 112 v~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 190 (359)
+++.. ++|.++++ +++...+... .....+++++++++|+ +|+++.. .+.|+++++ +
T Consensus 114 v~~~~~~~i~~~d~-~g~~~~~~~~---~~~~~~~~i~~~~~g~-l~v~~~~-----------------~~~i~~~~~-~ 170 (299)
T 2z2n_A 114 FTEMNGNRIGRITD-DGKIREYELP---NKGSYPSFITLGSDNA-LWFTENQ-----------------NNAIGRITE-S 170 (299)
T ss_dssp EEETTTTEEEEECT-TCCEEEEECS---STTCCEEEEEECTTSC-EEEEETT-----------------TTEEEEECT-T
T ss_pred EEecCCceEEEECC-CCCEEEecCC---CCCCCCceEEEcCCCC-EEEEeCC-----------------CCEEEEEcC-C
Confidence 99764 46999999 5555443221 1234688999999999 9999543 357999999 5
Q ss_pred CcEEEEe--CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec--CCCCCCceEECCCCCEEEEEecC
Q 018242 191 KQVTVLL--GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ--LPGFPDNIKRSPRGGFWVGIHSR 266 (359)
Q Consensus 191 ~~~~~~~--~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~p~~i~~d~~G~lwv~~~~~ 266 (359)
+++..+. .....|.+++++++++ +|++....++|.+++. .. ....+.. ....|.++++|++|++|+++...
T Consensus 171 g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g---~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 245 (299)
T 2z2n_A 171 GDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITT-SG---EITEFKIPTPNARPHAITAGAGIDLWFTEWGA 245 (299)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TC---CEEEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred CcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECC-CC---cEEEEECCCCCCCceeEEECCCCCEEEeccCC
Confidence 6666542 2345688999999987 8999888899999986 32 2222221 22457889999999999998654
Q ss_pred CCccccccccCCcccee
Q 018242 267 RKGISKLVLSFPWIGNV 283 (359)
Q Consensus 267 ~~~~~~~~~~~~~~g~~ 283 (359)
+. +.++++++++
T Consensus 246 ~~-----i~~~d~~g~~ 257 (299)
T 2z2n_A 246 NK-----IGRLTSNNII 257 (299)
T ss_dssp TE-----EEEEETTTEE
T ss_pred ce-----EEEECCCCce
Confidence 43 6666666653
No 30
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.75 E-value=5.9e-16 Score=141.71 Aligned_cols=218 Identities=16% Similarity=0.108 Sum_probs=134.2
Q ss_pred CEEEEeeCCCCCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEE
Q 018242 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCF 103 (359)
Q Consensus 24 ~~~~~~~~~~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 103 (359)
.+.+++ .++..|++|+++++|+ +|++...++|++++ ++ +...+...+ ........|.||++
T Consensus 22 ~~~~va-~~l~~P~~ia~~pdG~-l~V~e~~g~I~~i~-~g-~~~~~~~~~---------------v~~~g~~~p~gia~ 82 (352)
T 2ism_A 22 RVEEVV-GGLEVPWALAFLPDGG-MLIAERPGRIRLFR-EG-RLSTYAELS---------------VYHRGESGLLGLAL 82 (352)
T ss_dssp CEEEEE-CCCSCEEEEEECTTSC-EEEEETTTEEEEEE-TT-EEEEEEECC---------------CCCSTTCSEEEEEE
T ss_pred EEEEEE-CCCCCceEEEEcCCCe-EEEEeCCCeEEEEE-CC-CccEeecce---------------EeecCCCCceeEEE
Confidence 344444 4689999999999999 78777779999998 43 334332111 11122356899999
Q ss_pred ecC---CCeEEEEeCC------CcEEEEeCCCCeE---EEEeecCC--CccccccceEEEeCCCCEEEEEeCCCcccccc
Q 018242 104 NKT---NGDLYIADAY------FGLLKVGPEGGLA---TAVATQSE--GIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRN 169 (359)
Q Consensus 104 ~~~---~g~l~v~~~~------~~i~~~~~~~~~~---~~~~~~~~--~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~ 169 (359)
+++ ++.||+++.. +.|.+++.+++.+ +.+....+ ......+++|++++||+ ||+++...... .
T Consensus 83 ~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~-~- 159 (352)
T 2ism_A 83 HPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYER-E- 159 (352)
T ss_dssp CTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCG-G-
T ss_pred CCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCC-c-
Confidence 995 5899999753 5699998876532 22322222 22345778999999998 99996431100 0
Q ss_pred ceeeeeecCCCceEEEEeCCC-------------CcEEEEeCCCCCCceEEEccCCCEEEEEecCCCE--------EEEE
Q 018242 170 HISVILSGDKTGRLMKYDPAT-------------KQVTVLLGNLSFPNGVALSEDGNYILLAETTSCR--------ILRY 228 (359)
Q Consensus 170 ~~~~~~~~~~~g~v~~~d~~~-------------~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~--------i~~~ 228 (359)
. ........++|+++++++ ...+.+..+...|+|++++++...||+++...+. |.++
T Consensus 160 ~--~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i 237 (352)
T 2ism_A 160 L--AQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLI 237 (352)
T ss_dssp G--GGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEE
T ss_pred c--ccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEe
Confidence 0 000112357899999985 1233444566789999999954459999988776 4444
Q ss_pred EcCCCCCcc------------eeEeec--CCCCCCceEECCCCCEEEEEecCC
Q 018242 229 WLKTSKAGT------------IEIVAQ--LPGFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 229 ~~~~~~~~~------------~~~~~~--~~~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
.. +...+. ...... ....|.++++ .+|++|++...++
T Consensus 238 ~~-G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~ 288 (352)
T 2ism_A 238 VP-GGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQ 288 (352)
T ss_dssp CT-TCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTTT
T ss_pred cc-CCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEE-ECCEEEEEECCCC
Confidence 31 111100 000111 1224778888 5788999887544
No 31
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.75 E-value=1.7e-15 Score=138.46 Aligned_cols=232 Identities=15% Similarity=0.107 Sum_probs=158.4
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA 115 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~ 115 (359)
-.+.+.++++. ++++.. +.|.++++++.....+ ......|.++++++.++.||+++.
T Consensus 36 ~~C~~~~~~~~-ll~~~~-~~I~~i~~~g~~~~~~---------------------~~~~~~~~~l~~d~~~~~ly~~D~ 92 (349)
T 3v64_C 36 RSCKALGPEPV-LLFANR-IDIRQVLPHRSEYTLL---------------------LNNLENAIALDFHHRRELVFWSDV 92 (349)
T ss_dssp SCEEESSSCCE-EEEECB-SCEEEECTTSCCEEEE---------------------ECSCSCEEEEEEETTTTEEEEEET
T ss_pred CcccccccCce-eEeecc-cceEEEeCCCCeeEEe---------------------ecCCCceEEEEEeccccEEEEEec
Confidence 34555555554 555544 4699999887644432 123345899999987999999986
Q ss_pred CC-cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEE
Q 018242 116 YF-GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVT 194 (359)
Q Consensus 116 ~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 194 (359)
.. .|++++++++..+.+... ....|.++++|+.++.||++|.. .+.|.++++++...+
T Consensus 93 ~~~~I~r~~~~g~~~~~~~~~----~~~~p~glavd~~~g~ly~~d~~-----------------~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 93 TLDRILRANLNGSNVEEVVST----GLESPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRK 151 (349)
T ss_dssp TTTEEEEEETTSCSCEEEECS----SCSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCE
T ss_pred cCCceEEEecCCCCceEEEeC----CCCCccEEEEecCCCeEEEEcCC-----------------CCeEEEEcCCCCceE
Confidence 54 599999998765554321 23468899999755459999765 347999998865444
Q ss_pred EEe-CCCCCCceEEEccCCCEEEEEecCC-CEEEEEEcCCCCCcceeEeec-CCCCCCceEECC-CCCEEEEEecCCCcc
Q 018242 195 VLL-GNLSFPNGVALSEDGNYILLAETTS-CRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSP-RGGFWVGIHSRRKGI 270 (359)
Q Consensus 195 ~~~-~~~~~p~gia~~~d~~~l~v~~~~~-~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~-~G~lwv~~~~~~~~~ 270 (359)
.+. ..+..|++++++|+++.+||++... ++|+++++++.. .+.+.. .-..|++|++|+ +++||++....+
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~--- 225 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHH--- 225 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS---CEESCCSSCSCEEEEEEETTTTEEEEEETTTT---
T ss_pred EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC---cEEEEECCCCCcceEEEeCCCCEEEEEECCCC---
Confidence 433 4567899999999888899999988 999999987642 222222 224599999996 668999987543
Q ss_pred ccccccCCccceeeecCCccceeeeeecccccCcceEEEEECCCCCEEEEEEccCCceeeceEEEEEeCCEEEEecCCCC
Q 018242 271 SKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEKDGNLWIGSVNMP 350 (359)
Q Consensus 271 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~l~ig~~~~~ 350 (359)
.+.+++.+|...+.+... + ...+.++...+++||++.+.+.
T Consensus 226 ------------------------------------~I~~~~~dG~~~~~~~~~-~--~~~P~giav~~~~ly~td~~~~ 266 (349)
T 3v64_C 226 ------------------------------------VIERANLDGSHRKAVISQ-G--LPHPFAITVFEDSLYWTDWHTK 266 (349)
T ss_dssp ------------------------------------EEEEEETTSCSCEEEECS-S--CSSEEEEEEETTEEEEEETTTT
T ss_pred ------------------------------------EEEEEeCCCCceEEEEeC-C--CCCceEEEEECCEEEEecCCCC
Confidence 344555555433332221 1 2344555557788888888888
Q ss_pred eEEEEc
Q 018242 351 YAGLYN 356 (359)
Q Consensus 351 ~l~~~~ 356 (359)
.|.+++
T Consensus 267 ~V~~~~ 272 (349)
T 3v64_C 267 SINSAN 272 (349)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 888776
No 32
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.75 E-value=3.3e-16 Score=158.26 Aligned_cols=276 Identities=14% Similarity=0.124 Sum_probs=178.3
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA 115 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~ 115 (359)
..+|..|++|. +|+++.+++|.++++.+..++.+...+.. .+ ...........++.++ +|+||+++.
T Consensus 315 v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~-----~~------~~~l~~~~v~~i~~d~-~g~lWigt~ 381 (781)
T 3v9f_A 315 ARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQ-----MN------ESSLSNKVVSSVCDDG-QGKLWIGTD 381 (781)
T ss_dssp EEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----C-----CC------SSCCSSSCEEEEEECT-TSCEEEEEB
T ss_pred EEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccc-----cc------cCCCCCcceEEEEEcC-CCCEEEEeC
Confidence 35789999999 99999888999999988777766421100 00 0001123356788887 899999987
Q ss_pred CCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEE
Q 018242 116 YFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTV 195 (359)
Q Consensus 116 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 195 (359)
.+||.+++++++.++.+.. ........+..++.|++|+ ||++.. .++|+++++++++++.
T Consensus 382 ~~Gl~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~d~~g~-lWigt~------------------~~Gl~~~~~~~~~~~~ 441 (781)
T 3v9f_A 382 GGGINVFENGKRVAIYNKE-NRELLSNSVLCSLKDSEGN-LWFGTY------------------LGNISYYNTRLKKFQI 441 (781)
T ss_dssp SSCEEEEETTEEEEECC------CCCSBEEEEEECTTSC-EEEEET------------------TEEEEEECSSSCEEEE
T ss_pred CCcEEEEECCCCeEEEccC-CCCCCCcceEEEEECCCCC-EEEEec------------------cCCEEEEcCCCCcEEE
Confidence 7899999998776554321 1122335678899999999 999932 3579999998887776
Q ss_pred EeCC---CCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecC------CCCCCceEECCCCCEEEEEecC
Q 018242 196 LLGN---LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL------PGFPDNIKRSPRGGFWVGIHSR 266 (359)
Q Consensus 196 ~~~~---~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~p~~i~~d~~G~lwv~~~~~ 266 (359)
+... ......++.+++++ +|++. . ++|++++...... ..+... ...+..++.|++|+||+++.+.
T Consensus 442 ~~~~~~~~~~v~~i~~d~~g~-lwigt-~-~Gl~~~~~~~~~~---~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~ 515 (781)
T 3v9f_A 442 IELEKNELLDVRVFYEDKNKK-IWIGT-H-AGVFVIDLASKKV---IHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGG 515 (781)
T ss_dssp CCSTTTCCCCEEEEEECTTSE-EEEEE-T-TEEEEEESSSSSC---CEEECTTTSSCSCSCEEEEEECTTCCEEEEESSS
T ss_pred eccCCCCCCeEEEEEECCCCC-EEEEE-C-CceEEEeCCCCeE---EecccCcccccccceeEEEEEcCCCCEEEEEcCC
Confidence 5431 12345666676664 66664 4 6899999754432 222221 1234558899999999999755
Q ss_pred CCccccccccCCccceeeecCCc----cceeeeeecccccCc-----ceEE-EEECCCCCEEEEEEccCCceeeceEEEE
Q 018242 267 RKGISKLVLSFPWIGNVLIKLPI----DIVKIHSSLVKLSGN-----GGMA-MRISEQGNVLEILEEIGRKMWRSISEVE 336 (359)
Q Consensus 267 ~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~-----~~~~-~~~~~~g~~~~~~~~~~g~~~~~~~~~~ 336 (359)
+ +.++++..+.+..+.. +...+.+++.+.... ..++ .+++++.+.+..|...+|++...+.++.
T Consensus 516 G------l~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~ 589 (781)
T 3v9f_A 516 G------VGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATGEGLVCFPSARNFDYQVFQRKEGLPNTHIRAIS 589 (781)
T ss_dssp C------EEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEETTEEEEESCTTTCCCEEECGGGTCSCCCCCEEE
T ss_pred C------EEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEECCCceEEECCCCCcEEEccccCCCCCceEEEEE
Confidence 5 6666655443333321 112222332221111 0245 8889887777888777888777777776
Q ss_pred Ee-CCEEEEecCCCCeEEEEcCC
Q 018242 337 EK-DGNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 337 ~~-~g~l~ig~~~~~~l~~~~~~ 358 (359)
.+ +|+||+++ .++|.++++.
T Consensus 590 ~d~~g~lW~~t--~~Gl~~~~~~ 610 (781)
T 3v9f_A 590 EDKNGNIWAST--NTGISCYITS 610 (781)
T ss_dssp ECSSSCEEEEC--SSCEEEEETT
T ss_pred ECCCCCEEEEc--CCceEEEECC
Confidence 66 89999998 4568887754
No 33
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.75 E-value=2.8e-16 Score=154.07 Aligned_cols=198 Identities=17% Similarity=0.167 Sum_probs=151.4
Q ss_pred EEeeCCCCCCceEEEcc-CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEec
Q 018242 27 QYQIEGAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNK 105 (359)
Q Consensus 27 ~~~~~~~~~p~~i~~~~-~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~ 105 (359)
.++.+++..|.+|++++ +|+++|++..+++|+++++++...+.+. ......|.||++|.
T Consensus 30 ~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~--------------------~~g~~~P~GlAvD~ 89 (628)
T 4a0p_A 30 AIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVV--------------------EFGLDYPEGMAVDW 89 (628)
T ss_dssp ECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--------------------CSSCSCCCEEEEET
T ss_pred EEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEE--------------------eCCCCCcceEEEEe
Confidence 44555677899999997 5777788899999999999876444321 22235689999998
Q ss_pred CCCeEEEEeCCC-cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEE
Q 018242 106 TNGDLYIADAYF-GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLM 184 (359)
Q Consensus 106 ~~g~l~v~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 184 (359)
.+++||+++... .|.++++++...+.+.. .....|++|++||...+||++|.+. .+.|+
T Consensus 90 ~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~----~~l~~P~~iavdp~~G~lY~tD~g~----------------~~~I~ 149 (628)
T 4a0p_A 90 LGKNLYWADTGTNRIEVSKLDGQHRQVLVW----KDLDSPRALALDPAEGFMYWTEWGG----------------KPKID 149 (628)
T ss_dssp TTTEEEEEETTTTEEEEEETTSTTCEEEEC----SSCCCEEEEEEETTTTEEEEEECSS----------------SCEEE
T ss_pred CCCEEEEEECCCCEEEEEecCCCcEEEEEe----CCCCCcccEEEccCCCeEEEeCCCC----------------CCEEE
Confidence 789999998754 58999998776554432 1345789999998544499998641 35799
Q ss_pred EEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEe
Q 018242 185 KYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIH 264 (359)
Q Consensus 185 ~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~ 264 (359)
++++++...+.+...+..|+||+++++++.|||++...+.|+++++++... +.+......|.+++++. +++|++.+
T Consensus 150 r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~---~v~~~~l~~P~glav~~-~~ly~tD~ 225 (628)
T 4a0p_A 150 RAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR---EVIADDLPHPFGLTQYQ-DYIYWTDW 225 (628)
T ss_dssp EEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEEECCSCEEEEEEET-TEEEEEET
T ss_pred EEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce---EEeeccCCCceEEEEEC-CEEEEecC
Confidence 999987666666677889999999999889999999999999999876432 34444334589999986 78999998
Q ss_pred cCCC
Q 018242 265 SRRK 268 (359)
Q Consensus 265 ~~~~ 268 (359)
..+.
T Consensus 226 ~~~~ 229 (628)
T 4a0p_A 226 SRRS 229 (628)
T ss_dssp TTTE
T ss_pred CCCE
Confidence 7664
No 34
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.75 E-value=2.1e-15 Score=133.80 Aligned_cols=197 Identities=13% Similarity=0.180 Sum_probs=141.6
Q ss_pred CCCCceEEEccCCCeeEEec-CCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEE
Q 018242 33 AIGPESLAFDALGEGPYTGV-SDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLY 111 (359)
Q Consensus 33 ~~~p~~i~~~~~G~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~ 111 (359)
...|.+|+++++|+ +|++. .+++|+++|++ +++..+.. ......|.++++++ ++++|
T Consensus 61 ~~~~~~i~~~~~g~-l~v~~~~~~~v~~~d~~-g~~~~~~~-------------------~~~~~~~~~i~~~~-~g~l~ 118 (300)
T 2qc5_A 61 DAKVMCLIVSSLGD-IWFTENGANKIGKLSKK-GGFTEYPL-------------------PQPDSGPYGITEGL-NGDIW 118 (300)
T ss_dssp TCCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEEC-------------------SSTTCCEEEEEECS-TTCEE
T ss_pred CCcceeEEECCCCC-EEEEecCCCeEEEECCC-CCeEEecC-------------------CCCCCCCccceECC-CCCEE
Confidence 47899999999999 56554 46899999998 55554421 11225588999998 89999
Q ss_pred EEeCC-CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCC
Q 018242 112 IADAY-FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPAT 190 (359)
Q Consensus 112 v~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 190 (359)
+++.. ++|++++++ +++..+.. . .....|++++++++|+ +|+++.. .+.|++++++
T Consensus 119 v~~~~~~~i~~~~~~-g~~~~~~~--~-~~~~~~~~i~~d~~g~-l~v~~~~-----------------~~~i~~~~~~- 175 (300)
T 2qc5_A 119 FTQLNGDRIGKLTAD-GTIYEYDL--P-NKGSYPAFITLGSDNA-LWFTENQ-----------------NNSIGRITNT- 175 (300)
T ss_dssp EEETTTTEEEEECTT-SCEEEEEC--S-STTCCEEEEEECTTSS-EEEEETT-----------------TTEEEEECTT-
T ss_pred EEccCCCeEEEECCC-CCEEEccC--C-CCCCCceeEEECCCCC-EEEEecC-----------------CCeEEEECCC-
Confidence 99864 579999998 55544321 1 1235788999999999 9999643 3479999984
Q ss_pred CcEEEEe--CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec--CCCCCCceEECCCCCEEEEEecC
Q 018242 191 KQVTVLL--GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ--LPGFPDNIKRSPRGGFWVGIHSR 266 (359)
Q Consensus 191 ~~~~~~~--~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~p~~i~~d~~G~lwv~~~~~ 266 (359)
+++..+. .....|.+++++++++ +|++....++|.+++.++ ....+.. ....|.++++|++|+||+++...
T Consensus 176 g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 250 (300)
T 2qc5_A 176 GKLEEYPLPTNAAAPVGITSGNDGA-LWFVEIMGNKIGRITTTG----EISEYDIPTPNARPHAITAGKNSEIWFTEWGA 250 (300)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred CcEEEeeCCCCCCCcceEEECCCCC-EEEEccCCCEEEEEcCCC----cEEEEECCCCCCCceEEEECCCCCEEEeccCC
Confidence 5655443 2345789999999886 899998888999998632 2222211 12357889999999999999764
Q ss_pred CCccccccccCCccceee
Q 018242 267 RKGISKLVLSFPWIGNVL 284 (359)
Q Consensus 267 ~~~~~~~~~~~~~~g~~~ 284 (359)
+. +.++++.+++.
T Consensus 251 ~~-----i~~~~~~g~~~ 263 (300)
T 2qc5_A 251 NQ-----IGRITNDNTIQ 263 (300)
T ss_dssp TE-----EEEECTTSCEE
T ss_pred Ce-----EEEECCCCcEE
Confidence 44 66666666543
No 35
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.74 E-value=8.1e-16 Score=140.77 Aligned_cols=176 Identities=13% Similarity=0.132 Sum_probs=116.3
Q ss_pred EEEEeeCCCCCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEe
Q 018242 25 VVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFN 104 (359)
Q Consensus 25 ~~~~~~~~~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~ 104 (359)
+++++ .++..|++|+++++|+ +|++...++|++++.++ + +.+...+ ........|.||+++
T Consensus 21 ~~~va-~~l~~P~~ia~~pdG~-l~V~e~~g~I~~~d~~G-~-~~~~~~~---------------v~~~g~~g~~gia~~ 81 (354)
T 3a9g_A 21 ISEVA-SDLEVPWSIAPLGGGR-YLVTERPGRLVLISPSG-K-KLVASFD---------------VANVGEAGLLGLALH 81 (354)
T ss_dssp EEEEE-CSCSCEEEEEEEETTE-EEEEETTTEEEEECSSC-E-EEEEECC---------------CCCSTTCSEEEEEEC
T ss_pred EEEEe-CCCCCCeEEEEcCCCe-EEEEeCCCEEEEEeCCC-c-eEeeccc---------------eeecCCCceeeEEeC
Confidence 33444 4689999999999999 88877779999998654 3 3332110 011223568999999
Q ss_pred cC---CCeEEEEeCC--------CcEEEEeCCCC--e---EEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccc
Q 018242 105 KT---NGDLYIADAY--------FGLLKVGPEGG--L---ATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRR 168 (359)
Q Consensus 105 ~~---~g~l~v~~~~--------~~i~~~~~~~~--~---~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~ 168 (359)
++ ++.||++... +.|.+++.+++ . .+.+....+......+++|++++||+ ||+++...... .
T Consensus 82 pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~-~ 159 (354)
T 3a9g_A 82 PEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADP-R 159 (354)
T ss_dssp TTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCG-G
T ss_pred CCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCC-c
Confidence 96 6999998753 56999987765 1 22232212222345688999999999 99995321100 0
Q ss_pred cceeeeeecCCCceEEEEeCCCC--------cEEEEeCCCCCCceEEEccCCCEEEEEecCCCE
Q 018242 169 NHISVILSGDKTGRLMKYDPATK--------QVTVLLGNLSFPNGVALSEDGNYILLAETTSCR 224 (359)
Q Consensus 169 ~~~~~~~~~~~~g~v~~~d~~~~--------~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~ 224 (359)
. ........++|+++++++. ..+.+..+...|+|++++++...||+++...+.
T Consensus 160 ~---~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~ 220 (354)
T 3a9g_A 160 L---AQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVG 220 (354)
T ss_dssp G---GTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSS
T ss_pred c---ccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCC
Confidence 0 0001123578999999853 234556677889999999944459999988765
No 36
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.74 E-value=3.8e-15 Score=138.06 Aligned_cols=230 Identities=14% Similarity=0.103 Sum_probs=157.0
Q ss_pred eEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCCC
Q 018242 38 SLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYF 117 (359)
Q Consensus 38 ~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~~ 117 (359)
+.+.++++. ++++.. ..|.++++++.....+ ......|.++++++.++.||+++...
T Consensus 81 C~~~~~~~~-l~~~~~-~~I~~i~~~~~~~~~~---------------------~~~~~~~~gl~~d~~~~~ly~~D~~~ 137 (386)
T 3v65_B 81 CKALGPEPV-LLFANR-IDIRQVLPHRSEYTLL---------------------LNNLENAIALDFHHRRELVFWSDVTL 137 (386)
T ss_dssp EEECSSCCE-EEEECB-SCEEEECTTSCCCEEE---------------------ECSCSCEEEEEEETTTTEEEEEETTT
T ss_pred ECCccccce-eEeecC-ccceeeccCCCcEEEE---------------------ecCCCccEEEEEecCCCeEEEEeCCC
Confidence 444445444 444444 5689998887644332 12335689999998789999998754
Q ss_pred -cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEE
Q 018242 118 -GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVL 196 (359)
Q Consensus 118 -~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 196 (359)
.|++++++++..+.+... ....|.+|++|+.++.||++|.. .+.|.++++++...+.+
T Consensus 138 ~~I~r~~~~g~~~~~~~~~----~~~~p~glavd~~~g~lY~~d~~-----------------~~~I~~~~~dg~~~~~l 196 (386)
T 3v65_B 138 DRILRANLNGSNVEEVVST----GLESPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRKVL 196 (386)
T ss_dssp TEEEEEETTSCCEEEEECS----SCSCCCCEEEETTTTEEEEEETT-----------------TTEEEECBTTSCSCEEE
T ss_pred CcEEEEecCCCCcEEEEeC----CCCCccEEEEEeCCCeEEEEcCC-----------------CCeEEEEeCCCCceEEe
Confidence 599999998776554321 23478899999765559999765 34789999876544443
Q ss_pred -eCCCCCCceEEEccCCCEEEEEecCC-CEEEEEEcCCCCCcceeEeec-CCCCCCceEECC-CCCEEEEEecCCCcccc
Q 018242 197 -LGNLSFPNGVALSEDGNYILLAETTS-CRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSP-RGGFWVGIHSRRKGISK 272 (359)
Q Consensus 197 -~~~~~~p~gia~~~d~~~l~v~~~~~-~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~-~G~lwv~~~~~~~~~~~ 272 (359)
...+..|++|+++|+++.|||++... ++|+++++++.. ...+.. .-..|++|++|+ +++||++....+
T Consensus 197 ~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~----- 268 (386)
T 3v65_B 197 LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHH----- 268 (386)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEEGGGTEEEEEETTTT-----
T ss_pred ecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC---cEEEEECCCCCeeeEEEeCCCCEEEEEECCCC-----
Confidence 34567899999999888899999988 899999987542 223332 224599999995 568999987543
Q ss_pred ccccCCccceeeecCCccceeeeeecccccCcceEEEEECCCCCEEEEEEccCCceeeceEEEEEeCCEEEEecCCCCeE
Q 018242 273 LVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEKDGNLWIGSVNMPYA 352 (359)
Q Consensus 273 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~l~ig~~~~~~l 352 (359)
.+.+++.+|...+.+.. .+ ...+.++...++.||++.+.+.+|
T Consensus 269 ----------------------------------~I~~~d~dG~~~~~~~~-~~--~~~P~giav~~~~ly~td~~~~~V 311 (386)
T 3v65_B 269 ----------------------------------VIERANLDGSHRKAVIS-QG--LPHPFAITVFEDSLYWTDWHTKSI 311 (386)
T ss_dssp ----------------------------------EEEEECTTSCSCEEEEC-SS--CSSEEEEEEETTEEEEEETTTTEE
T ss_pred ----------------------------------EEEEEeCCCCeeEEEEE-CC--CCCceEEEEECCEEEEeeCCCCeE
Confidence 34555555543333222 11 234455555777888888888888
Q ss_pred EEEc
Q 018242 353 GLYN 356 (359)
Q Consensus 353 ~~~~ 356 (359)
.+++
T Consensus 312 ~~~~ 315 (386)
T 3v65_B 312 NSAN 315 (386)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8776
No 37
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=1.2e-15 Score=143.73 Aligned_cols=248 Identities=15% Similarity=0.111 Sum_probs=164.4
Q ss_pred CCCCCCceEEEccC--CCeeEEecC-CCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEE----
Q 018242 31 EGAIGPESLAFDAL--GEGPYTGVS-DGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCF---- 103 (359)
Q Consensus 31 ~~~~~p~~i~~~~~--G~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~---- 103 (359)
..+..|.+|++||. ++ ||++.. .++|.++|++++.++.+.... ......|.+|++
T Consensus 136 ~~~~~p~~la~dp~~~~~-Lyv~~~~~~~i~~ID~~~~~v~~l~~~~-----------------~~~~~~p~~ia~~~~~ 197 (496)
T 3kya_A 136 CGFSDNGRLAFDPLNKDH-LYICYDGHKAIQLIDLKNRMLSSPLNIN-----------------TIPTNRIRSIAFNKKI 197 (496)
T ss_dssp BCCCSEEEEEEETTEEEE-EEEEEETEEEEEEEETTTTEEEEEECCT-----------------TSSCSBEEEEEECCCB
T ss_pred cccCCCCEEEEccCCCCE-EEEEECCCCeEEEEECCCCEEEEEEccC-----------------ccccCCCcEEEEeecc
Confidence 44668999999983 55 776655 478999999988777653110 112346999999
Q ss_pred ---ecCCCeEEEEeCCC-------cEEEEeCCC-CeEE------EEeecCCCccccccceEEEeCCCCEEEEEeCCCccc
Q 018242 104 ---NKTNGDLYIADAYF-------GLLKVGPEG-GLAT------AVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQ 166 (359)
Q Consensus 104 ---~~~~g~l~v~~~~~-------~i~~~~~~~-~~~~------~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~ 166 (359)
+++++.||+++..+ .++.++.+. +.+. .+. ....|+++++++++++||+++..
T Consensus 198 ~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~------~~~~p~giavdp~~g~LYvtd~~---- 267 (496)
T 3kya_A 198 EGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA------AYKQCNGATIHPINGELYFNSYE---- 267 (496)
T ss_dssp TTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE------EESCCCCEEECTTTCCEEEEETT----
T ss_pred cccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeec------cCCCceEEEEcCCCCeEEEEECC----
Confidence 99555699998764 277776544 2331 221 23478999999954449999754
Q ss_pred cccceeeeeecCCCceEEEEeCC-------CCcE------------EE-E-eCCCCCCceEEEccCCCEEEEEecCCCEE
Q 018242 167 RRNHISVILSGDKTGRLMKYDPA-------TKQV------------TV-L-LGNLSFPNGVALSEDGNYILLAETTSCRI 225 (359)
Q Consensus 167 ~~~~~~~~~~~~~~g~v~~~d~~-------~~~~------------~~-~-~~~~~~p~gia~~~d~~~l~v~~~~~~~i 225 (359)
.+.|+++|++ ++.. +. + ......|.+|+++|+++.||++++.+++|
T Consensus 268 -------------~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I 334 (496)
T 3kya_A 268 -------------KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYF 334 (496)
T ss_dssp -------------TTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred -------------CCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEE
Confidence 4579999987 5543 12 2 22345689999999999999999999999
Q ss_pred EEEEcCCCC--CcceeEeecC---C------------CCCC-ceEEC-------CCCCEEEEEecCCCccccccccCCcc
Q 018242 226 LRYWLKTSK--AGTIEIVAQL---P------------GFPD-NIKRS-------PRGGFWVGIHSRRKGISKLVLSFPWI 280 (359)
Q Consensus 226 ~~~~~~~~~--~~~~~~~~~~---~------------~~p~-~i~~d-------~~G~lwv~~~~~~~~~~~~~~~~~~~ 280 (359)
++++.+... ......+... . ..|. ++++| ++|+|||+...+++ +.+++++
T Consensus 335 ~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~r-----Ir~i~~~ 409 (496)
T 3kya_A 335 MRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFC-----VRKVTPE 409 (496)
T ss_dssp EEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTE-----EEEECTT
T ss_pred EEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCE-----EEEEeCC
Confidence 998875431 1111222211 1 1377 67887 67899999987654 4444444
Q ss_pred ceeeecCCccceeeeeecccccCcceEEEEECCCCCEEEEEEc--------------cCC-----ceeeceEEEEEe-C-
Q 018242 281 GNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEE--------------IGR-----KMWRSISEVEEK-D- 339 (359)
Q Consensus 281 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------------~~g-----~~~~~~~~~~~~-~- 339 (359)
| .+...... .+| ..+..+.++..+ +
T Consensus 410 G----------------------------------~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~ 455 (496)
T 3kya_A 410 G----------------------------------IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVK 455 (496)
T ss_dssp C----------------------------------BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTT
T ss_pred C----------------------------------CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCC
Confidence 4 22222111 011 124567777766 3
Q ss_pred CEEEEecCCCCeEEEEcCC
Q 018242 340 GNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 340 g~l~ig~~~~~~l~~~~~~ 358 (359)
|.|||+...+.+|.++.++
T Consensus 456 g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 456 EMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp TEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEeCCCCEEEEEECC
Confidence 8999999999999998865
No 38
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.73 E-value=3.5e-16 Score=137.06 Aligned_cols=190 Identities=18% Similarity=0.314 Sum_probs=136.4
Q ss_pred CCCCCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeE
Q 018242 31 EGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDL 110 (359)
Q Consensus 31 ~~~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l 110 (359)
.....|.+|+++++|+ +|++..+++|+++|+++.....+. ......|.++++++ +|++
T Consensus 64 ~~~~~p~~i~~~~~g~-l~v~~~~~~i~~~d~~~~~~~~~~--------------------~~~~~~p~~i~~~~-~g~l 121 (270)
T 1rwi_B 64 NGLYQPQGLAVDGAGT-VYVTDFNNRVVTLAAGSNNQTVLP--------------------FDGLNYPEGLAVDT-QGAV 121 (270)
T ss_dssp CSCCSCCCEEECTTCC-EEEEETTTEEEEECTTCSCCEECC--------------------CCSCSSEEEEEECT-TCCE
T ss_pred CCcCCcceeEECCCCC-EEEEcCCCEEEEEeCCCceEeeee--------------------cCCcCCCcceEECC-CCCE
Confidence 4457899999999999 666655789999999876433221 11224588999999 8899
Q ss_pred EEEeCC-CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCC
Q 018242 111 YIADAY-FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPA 189 (359)
Q Consensus 111 ~v~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 189 (359)
|+++.. +.|.+++..+...... . ......|++|+++++|+ +|+++.. .+.|++++++
T Consensus 122 ~v~~~~~~~i~~~~~~~~~~~~~-~---~~~~~~p~~i~~~~~g~-l~v~~~~-----------------~~~i~~~~~~ 179 (270)
T 1rwi_B 122 YVADRGNNRVVKLAAGSKTQTVL-P---FTGLNDPDGVAVDNSGN-VYVTDTD-----------------NNRVVKLEAE 179 (270)
T ss_dssp EEEEGGGTEEEEECTTCCSCEEC-C---CCSCCSCCCEEECTTCC-EEEEEGG-----------------GTEEEEECTT
T ss_pred EEEECCCCEEEEEECCCceeEee-c---cccCCCceeEEEeCCCC-EEEEECC-----------------CCEEEEEecC
Confidence 999764 4688997655443221 1 11234789999999999 9999643 3579999998
Q ss_pred CCcEEEEe-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecC-CCCCCceEECCCCCEEEEEecCC
Q 018242 190 TKQVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL-PGFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 190 ~~~~~~~~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
++...... .....|.+++++++|+ +|+++..+++|.+|+.++... ...... ...|.++++|++|++|+++..++
T Consensus 180 ~~~~~~~~~~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~~~~---~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 255 (270)
T 1rwi_B 180 SNNQVVLPFTDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGSTTS---TVLPFTGLNTPLAVAVDSDRTVYVADRGND 255 (270)
T ss_dssp TCCEEECCCSSCCSEEEEEECTTCC-EEEEETTTSCEEEECTTCSCC---EECCCCSCSCEEEEEECTTCCEEEEEGGGT
T ss_pred CCceEeecccCCCCceEEEECCCCC-EEEEECCCCcEEEEcCCCCcc---eeeccCCCCCceeEEECCCCCEEEEECCCC
Confidence 76554432 3346789999999984 999999889999998754321 111111 13588999999999999998765
Q ss_pred C
Q 018242 268 K 268 (359)
Q Consensus 268 ~ 268 (359)
.
T Consensus 256 ~ 256 (270)
T 1rwi_B 256 R 256 (270)
T ss_dssp E
T ss_pred E
Confidence 4
No 39
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.73 E-value=2.8e-16 Score=142.54 Aligned_cols=214 Identities=15% Similarity=0.230 Sum_probs=142.9
Q ss_pred CCCCCCceEEEccCCCeeEEecCCCEEEEEEcCCc--ceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCC
Q 018242 31 EGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQR--RWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNG 108 (359)
Q Consensus 31 ~~~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g 108 (359)
+.+..|.+++++++|++|+++..++.|.+||+++. ....+.... ..+ ........|.+|+++++++
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~--------~~g----~~~~~~~~P~~ia~~~~~g 155 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSM--------QPG----SDQNHFCQPTDVAVEPSTG 155 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTT--------BCC----CSTTCCSSEEEEEECTTTC
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccC--------CCC----CCccccCCCcEEEEeCCCC
Confidence 45679999999999995556677899999999875 233332110 000 0012234699999998789
Q ss_pred eEEEEeC--CCcEEEEeCCCCeEEEEeecCC-----CccccccceEEEeCC-CCEEEEEeCCCccccccceeeeeecCCC
Q 018242 109 DLYIADA--YFGLLKVGPEGGLATAVATQSE-----GIPFRFCNSLDIDQS-TGIIYFTDSSSQFQRRNHISVILSGDKT 180 (359)
Q Consensus 109 ~l~v~~~--~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~d~~-g~~l~v~d~~~~~~~~~~~~~~~~~~~~ 180 (359)
++|+++. .+.|.+++.++.....+..... ...+..|++|+++++ |+ |||++.. .
T Consensus 156 ~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~-l~v~d~~-----------------~ 217 (329)
T 3fvz_A 156 AVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQ-LCVADRE-----------------N 217 (329)
T ss_dssp CEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTE-EEEEETT-----------------T
T ss_pred eEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCE-EEEEECC-----------------C
Confidence 9999985 4569999977665544432211 124557999999999 66 9999765 4
Q ss_pred ceEEEEeCCCCcEEEEeC---CCCCCceEEEcc------CCCEEEEEecCCCEEEEEEcCCCCCcceeEee---cCCCCC
Q 018242 181 GRLMKYDPATKQVTVLLG---NLSFPNGVALSE------DGNYILLAETTSCRILRYWLKTSKAGTIEIVA---QLPGFP 248 (359)
Q Consensus 181 g~v~~~d~~~~~~~~~~~---~~~~p~gia~~~------d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~p 248 (359)
+.|.+|+++++++..... ....+.++++.| +++ +|+++....++.+|+....+. ...+. .....|
T Consensus 218 ~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~-~~v~~~~~~~v~~~~~~~g~~--~~~~~~~~~~~~~p 294 (329)
T 3fvz_A 218 GRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGK-PYFGDQEPVQGFVMNFSSGEI--IDVFKPVRKHFDMP 294 (329)
T ss_dssp TEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECC-CCTTCSCCCCEEEEETTTCCE--EEEECCSSSCCSSE
T ss_pred CEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCC-EEeccCCCcEEEEEEcCCCeE--EEEEcCCCCccCCe
Confidence 579999998666544331 123455666666 555 666666677899999754422 22222 122358
Q ss_pred CceEECCCCCEEEEEecCCCccccccccCCccce
Q 018242 249 DNIKRSPRGGFWVGIHSRRKGISKLVLSFPWIGN 282 (359)
Q Consensus 249 ~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~g~ 282 (359)
.++++|++|+|||+...++. +.+++.+++
T Consensus 295 ~~ia~~~dG~lyvad~~~~~-----I~~~~~~~~ 323 (329)
T 3fvz_A 295 HDIVASEDGTVYIGDAHTNT-----VWKFTLTEK 323 (329)
T ss_dssp EEEEECTTSEEEEEESSSCC-----EEEEEEEEC
T ss_pred eEEEECCCCCEEEEECCCCE-----EEEEeCCcc
Confidence 89999999999999987765 666655543
No 40
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.73 E-value=7.8e-15 Score=132.27 Aligned_cols=224 Identities=13% Similarity=0.074 Sum_probs=147.6
Q ss_pred eEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC-CcEEEEeCCC
Q 018242 48 PYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY-FGLLKVGPEG 126 (359)
Q Consensus 48 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~-~~i~~~~~~~ 126 (359)
|+++.. ..|.++|+++.+...+ ......|.+++++++++.||+++.. +.|+++++++
T Consensus 4 ll~~~~-~~I~~i~~~~~~~~~~---------------------~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g 61 (316)
T 1ijq_A 4 LFFTNR-HEVRKMTLDRSEYTSL---------------------IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDR 61 (316)
T ss_dssp EEEECB-SSEEEEETTSCCCEEE---------------------ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--
T ss_pred EEEECC-CeEEEEECCCcceEeh---------------------hcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCC
Confidence 444444 4589999887644322 1234568999999878999999875 4699999886
Q ss_pred ----CeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEe-CCCC
Q 018242 127 ----GLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLL-GNLS 201 (359)
Q Consensus 127 ----~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~ 201 (359)
...+.+.. .....|.+|++|+.++.||++|.. .+.|.++++++...+.+. ....
T Consensus 62 ~~~~~~~~~~~~----~~~~~p~glavd~~~~~ly~~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~ 120 (316)
T 1ijq_A 62 AHGVSSYDTVIS----RDIQAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGS 120 (316)
T ss_dssp ------CEEEEC----SSCSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSSSEEEEEECTTC
T ss_pred CCCCcccEEEEe----CCCCCcCEEEEeecCCeEEEEECC-----------------CCEEEEEeCCCCceEEEEECCCC
Confidence 22222221 123578899999754449999764 347999998865555443 4567
Q ss_pred CCceEEEccCCCEEEEEecCC-CEEEEEEcCCCCCcceeEeec-CCCCCCceEECCC-CCEEEEEecCCCccccccccCC
Q 018242 202 FPNGVALSEDGNYILLAETTS-CRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPR-GGFWVGIHSRRKGISKLVLSFP 278 (359)
Q Consensus 202 ~p~gia~~~d~~~l~v~~~~~-~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~-G~lwv~~~~~~~~~~~~~~~~~ 278 (359)
.|++++++|+++.+||++... ++|+++++++.. .+.+.. .-..|++|++|++ ++||++....+
T Consensus 121 ~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~---~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~----------- 186 (316)
T 1ijq_A 121 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSKLH----------- 186 (316)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC---EEEEECSSCSCEEEEEEETTTTEEEEEETTTT-----------
T ss_pred CcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC---eEEEEECCCCCceEEEEeccCCEEEEEECCCC-----------
Confidence 899999999888899999875 899999986532 233332 2346999999974 67999986533
Q ss_pred ccceeeecCCccceeeeeecccccCcceEEEEECCCCCEEEEEEccCCceeeceEEEEEeCCEEEEecCCCCeEEEEcC
Q 018242 279 WIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEKDGNLWIGSVNMPYAGLYNY 357 (359)
Q Consensus 279 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~l~ig~~~~~~l~~~~~ 357 (359)
.+.+++.+|...+.+....+ ....+.++..++++||++.+.+.+|.+++.
T Consensus 187 ----------------------------~I~~~d~dg~~~~~~~~~~~-~~~~P~giav~~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 187 ----------------------------SISSIDVNGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp ----------------------------EEEEEETTSCSCEEEEECTT-TTSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred ----------------------------eEEEEecCCCceEEEeecCC-ccCCcEEEEEECCEEEEEECCCCeEEEEeC
Confidence 34445555543333322111 123445555567788888887788877764
No 41
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=1.3e-15 Score=153.94 Aligned_cols=267 Identities=14% Similarity=0.124 Sum_probs=175.2
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA 115 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~ 115 (359)
..+++.|++|+ +|+++.+++|+++++.++.++.+..+ ..........++.++ +++||+++.
T Consensus 365 v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~-----------------~~~~~~~v~~i~~d~-~g~lWigt~ 425 (781)
T 3v9f_A 365 VSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKEN-----------------RELLSNSVLCSLKDS-EGNLWFGTY 425 (781)
T ss_dssp EEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC----------------------CCCSBEEEEEECT-TSCEEEEET
T ss_pred eEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCC-----------------CCCCCcceEEEEECC-CCCEEEEec
Confidence 45788999999 99999888899999987655443100 001123456788887 899999987
Q ss_pred CCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEE
Q 018242 116 YFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTV 195 (359)
Q Consensus 116 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 195 (359)
.+||+++++++++++.+... ......+..++.|++|+ ||++.. ++|++++++++++..
T Consensus 426 ~~Gl~~~~~~~~~~~~~~~~--~~~~~~v~~i~~d~~g~-lwigt~-------------------~Gl~~~~~~~~~~~~ 483 (781)
T 3v9f_A 426 LGNISYYNTRLKKFQIIELE--KNELLDVRVFYEDKNKK-IWIGTH-------------------AGVFVIDLASKKVIH 483 (781)
T ss_dssp TEEEEEECSSSCEEEECCST--TTCCCCEEEEEECTTSE-EEEEET-------------------TEEEEEESSSSSCCE
T ss_pred cCCEEEEcCCCCcEEEeccC--CCCCCeEEEEEECCCCC-EEEEEC-------------------CceEEEeCCCCeEEe
Confidence 77999999998887665321 22334677899999999 999932 479999998877665
Q ss_pred EeCCC------CCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCC----ceEECCCCCEEEEEec
Q 018242 196 LLGNL------SFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPD----NIKRSPRGGFWVGIHS 265 (359)
Q Consensus 196 ~~~~~------~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~----~i~~d~~G~lwv~~~~ 265 (359)
+.... ..+..++.+++|+ +|++ +..++|++++.+.. ..+.+....++|. .++.|++|+||+++.
T Consensus 484 ~~~~~~~~~~~~~i~~i~~d~~g~-lWig-t~~~Gl~~~~~~~~---~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~- 557 (781)
T 3v9f_A 484 HYDTSNSQLLENFVRSIAQDSEGR-FWIG-TFGGGVGIYTPDMQ---LVRKFNQYEGFCSNTINQIYRSSKGQMWLATG- 557 (781)
T ss_dssp EECTTTSSCSCSCEEEEEECTTCC-EEEE-ESSSCEEEECTTCC---EEEEECTTTTCSCSCEEEEEECTTSCEEEEET-
T ss_pred cccCcccccccceeEEEEEcCCCC-EEEE-EcCCCEEEEeCCCC---eEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-
Confidence 43211 2345777887776 5665 44467999985433 2333332233343 478899999999987
Q ss_pred CCCcccccc-ccCCccceeeecCCc----cceeeeeeccccc------CcceEEEEECCCCCEEEEEEccCCceeeceE-
Q 018242 266 RRKGISKLV-LSFPWIGNVLIKLPI----DIVKIHSSLVKLS------GNGGMAMRISEQGNVLEILEEIGRKMWRSIS- 333 (359)
Q Consensus 266 ~~~~~~~~~-~~~~~~g~~~~~~~~----~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~- 333 (359)
.+ + .++++....+..+.. +...+..++.+.. .. .++.+++++...+..|...+|++...+.
T Consensus 558 ~G------lv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~-~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~ 630 (781)
T 3v9f_A 558 EG------LVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTN-TGISCYITSKKCFYTYDHSNNIPQGSFIS 630 (781)
T ss_dssp TE------EEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECS-SCEEEEETTTTEEEEECGGGTCCSSCEEE
T ss_pred CC------ceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcC-CceEEEECCCCceEEecccCCcccccccc
Confidence 33 4 666654433333221 1112222222211 12 4688999999999999888887766552
Q ss_pred -EEEE-eCCEEEEecCCCCeEEEEcCC
Q 018242 334 -EVEE-KDGNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 334 -~~~~-~~g~l~ig~~~~~~l~~~~~~ 358 (359)
.+.. .+|+||+|+. +++.+++++
T Consensus 631 ~~~~~~~~G~l~~g~~--~Gl~~f~p~ 655 (781)
T 3v9f_A 631 GCVTKDHNGLIYFGSI--NGLCFFNPD 655 (781)
T ss_dssp EEEEECTTSCEEEEET--TEEEEECSC
T ss_pred CceEECCCCEEEEECC--CceEEEChh
Confidence 3443 4899999995 467777654
No 42
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.71 E-value=1.3e-15 Score=149.21 Aligned_cols=198 Identities=15% Similarity=0.156 Sum_probs=141.1
Q ss_pred EEeeCCCCCCceEEEcc-CCCeeEEecCCCEEEEEEcCCcce-EEEeecCCCCCCCCCCcccccccccccCCcceEEEEe
Q 018242 27 QYQIEGAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRW-LHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFN 104 (359)
Q Consensus 27 ~~~~~~~~~p~~i~~~~-~G~~l~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~ 104 (359)
.+..+++..|.+|++++ +|+++|++..+++|+++++++... .. .+......|.||++|
T Consensus 33 ~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~--------------------v~~~~~~~P~GlAvD 92 (619)
T 3s94_A 33 TIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQN--------------------VVVSGLLSPDGLACD 92 (619)
T ss_dssp ---CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEE--------------------EECSSCSCEEEEEEE
T ss_pred EEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEE--------------------EEeCCCCCcCeEEEE
Confidence 44455678899999997 567777888889999999986521 11 112233569999999
Q ss_pred cCCCeEEEEeCCC-cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceE
Q 018242 105 KTNGDLYIADAYF-GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRL 183 (359)
Q Consensus 105 ~~~g~l~v~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 183 (359)
..+++||+++... .|.+++.++...+.+.. .....|++|++||.+.+||++|.+. .+.|
T Consensus 93 ~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~----~~l~~P~~Iavdp~~g~ly~tD~g~----------------~~~I 152 (619)
T 3s94_A 93 WLGEKLYWTDSETNRIEVSNLDGSLRKVLFW----QELDQPRAIALDPSSGFMYWTDWGE----------------VPKI 152 (619)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEEC----SSCSCCCCEEEETTTTEEEEEECSS----------------SCEE
T ss_pred ecCCEEEEEeCCCCEEEEEECCCCCEEEEEe----CCCCCCceEEEecCCCeEEEeccCC----------------CCEE
Confidence 9889999998754 58899998876555442 1345799999999755599998641 3479
Q ss_pred EEEeCCCCcEEEEe-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-CCCCCCceEECCCCCEEE
Q 018242 184 MKYDPATKQVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGGFWV 261 (359)
Q Consensus 184 ~~~d~~~~~~~~~~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwv 261 (359)
++.++++...+.+. .....|+||+++++++.|||++...++|+++++++.. .+.+.. ....|.+|+++.+ ++|+
T Consensus 153 ~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~---~~~~~~~~~~~P~gi~~~~~-~ly~ 228 (619)
T 3s94_A 153 ERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN---RQAVVKGSLPHPFALTLFED-ILYW 228 (619)
T ss_dssp EEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCE---EC---------CCCEEESSS-EEEE
T ss_pred EEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCc---cEEEEeCCCCCceEEEEeCC-EEEE
Confidence 99998865444443 5678899999999888899999999999999987642 222222 2245899999876 7999
Q ss_pred EEecCCC
Q 018242 262 GIHSRRK 268 (359)
Q Consensus 262 ~~~~~~~ 268 (359)
+.+..+.
T Consensus 229 td~~~~~ 235 (619)
T 3s94_A 229 TDWSTHS 235 (619)
T ss_dssp ECTTTCS
T ss_pred ecCCCCE
Confidence 9987665
No 43
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.71 E-value=1.1e-14 Score=132.35 Aligned_cols=199 Identities=19% Similarity=0.197 Sum_probs=130.5
Q ss_pred CCCCCceEEEccCCCeeEEecC---CCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCC
Q 018242 32 GAIGPESLAFDALGEGPYTGVS---DGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNG 108 (359)
Q Consensus 32 ~~~~p~~i~~~~~G~~l~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g 108 (359)
....|.+++++|+|+ +|+... ++.|+.|+.++++.+.+. ........|.++++++++.
T Consensus 38 ~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~------------------~~~~~~~~p~~~a~spdg~ 98 (347)
T 3hfq_A 38 ATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLN------------------TVVAPGTPPAYVAVDEARQ 98 (347)
T ss_dssp ECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEE------------------EEEEESCCCSEEEEETTTT
T ss_pred ccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEee------------------eeecCCCCCEEEEECCCCC
Confidence 347899999999999 776554 478999999776544432 1122345688999999555
Q ss_pred eEEEEeCCC-cEEEEeCC-CCeEEEEeec-CCC------ccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCC
Q 018242 109 DLYIADAYF-GLLKVGPE-GGLATAVATQ-SEG------IPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDK 179 (359)
Q Consensus 109 ~l~v~~~~~-~i~~~~~~-~~~~~~~~~~-~~~------~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~ 179 (359)
.||+++... .+..++.+ ++..+.+... ..+ .....++.++++|+|+ +|+++..
T Consensus 99 ~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~----------------- 160 (347)
T 3hfq_A 99 LVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLG----------------- 160 (347)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETT-----------------
T ss_pred EEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCC-----------------
Confidence 688887543 47777763 4444333221 111 0123467899999999 9999654
Q ss_pred CceEEEEeCC-CCcEEEE----eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC--CCcceeEeecCC------C
Q 018242 180 TGRLMKYDPA-TKQVTVL----LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS--KAGTIEIVAQLP------G 246 (359)
Q Consensus 180 ~g~v~~~d~~-~~~~~~~----~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~--~~~~~~~~~~~~------~ 246 (359)
.+.|..|+.+ ++++... ......|.+++++|||+++|+++..++.+.+|+++.. .......+...+ .
T Consensus 161 ~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (347)
T 3hfq_A 161 SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHN 240 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCC
T ss_pred CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCC
Confidence 3357666665 4554432 1233468899999999999999999999999987642 111111222222 2
Q ss_pred CCCceEECCCCC-EEEEEecCC
Q 018242 247 FPDNIKRSPRGG-FWVGIHSRR 267 (359)
Q Consensus 247 ~p~~i~~d~~G~-lwv~~~~~~ 267 (359)
.|.+++++++|+ ||++....+
T Consensus 241 ~~~~i~~spdG~~l~v~~~~~~ 262 (347)
T 3hfq_A 241 GAAAIRLSHDGHFLYVSNRGYN 262 (347)
T ss_dssp EEEEEEECTTSCEEEEEEETTT
T ss_pred cceeEEECCCCCEEEEEeCCCC
Confidence 356699999997 778776544
No 44
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.70 E-value=1.3e-14 Score=146.92 Aligned_cols=274 Identities=12% Similarity=0.166 Sum_probs=171.4
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA 115 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~ 115 (359)
..+|+.|++|+ +|+++.+ +|+++|+.++++..+...+.. ...........|..|+ +|+||+++.
T Consensus 265 i~~i~~d~~g~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~-------------~~~l~~~~i~~i~~D~-~g~lWigt~ 328 (795)
T 4a2l_A 265 IRSLAMDSQNR-LWIGTFN-DLNIYHEGTDSFASYSSNPVE-------------NGSLSQRSVRSIFMDS-QGGMWLGTY 328 (795)
T ss_dssp EEEEEECTTSC-EEEEESS-CEEEEETTTTEEEEECCCTTS-------------TTSCSSSCEEEEEECT-TSCEEEEES
T ss_pred EEEEEEcCCCC-EEEEeCC-hhheEcCCCCeEEEEecCCCC-------------CCCCCCCcEEEEEEeC-CcCEEEEEC
Confidence 45788999999 9999986 799999998877766422100 0001123456888888 999999998
Q ss_pred CCcEEEEeCCCCeEEEEeecC--CCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcE
Q 018242 116 YFGLLKVGPEGGLATAVATQS--EGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQV 193 (359)
Q Consensus 116 ~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 193 (359)
.+||.++++.++.++.+.... .......+..++.|++|+ ||++. ..++|.+++++++.+
T Consensus 329 ~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt------------------~~~Gl~~~~~~~~~~ 389 (795)
T 4a2l_A 329 FGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGT------------------NDGGLNLYNPITQRF 389 (795)
T ss_dssp SSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEE------------------SSSCEEEECTTTCCE
T ss_pred CCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEE------------------CCCCeEEEcCCCCcE
Confidence 889999998877766543211 122334678899999999 99993 235799999988877
Q ss_pred EEEeCC-------C--CCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-CC----CCCCceEECCCCCE
Q 018242 194 TVLLGN-------L--SFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LP----GFPDNIKRSPRGGF 259 (359)
Q Consensus 194 ~~~~~~-------~--~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~----~~p~~i~~d~~G~l 259 (359)
..+... + .....++.+++++.||+ .+.+++|++++.... ....+.. .+ .....++.|++|+|
T Consensus 390 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~~~Gl~~~d~~~~---~~~~~~~~~~~l~~~~v~~i~~d~~g~l 465 (795)
T 4a2l_A 390 TSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTHAGGLSILHRNSG---QVENFNQRNSQLVNENVYAILPDGEGNL 465 (795)
T ss_dssp EEECCC------CCSCSCEEEEEEETTTTEEEE-EETTTEEEEEETTTC---CEEEECTTTSCCSCSCEEEEEECSSSCE
T ss_pred EEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeCcCceeEEeCCCC---cEEEeecCCCCcCCCeeEEEEECCCCCE
Confidence 765422 1 12346666777753444 556678999996543 2333322 11 12345788999999
Q ss_pred EEEEecCCCccccccccCCccceeeecCCc-------cceeeeeecccccCc-----ceEEEEECCCCCEEEEEE---cc
Q 018242 260 WVGIHSRRKGISKLVLSFPWIGNVLIKLPI-------DIVKIHSSLVKLSGN-----GGMAMRISEQGNVLEILE---EI 324 (359)
Q Consensus 260 wv~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~---~~ 324 (359)
|+++. .+ +.++++....+..+.. +...+..++.+.... ..++.+++++...+ .+. ..
T Consensus 466 wigt~-~G------l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~-~~~~~~~~ 537 (795)
T 4a2l_A 466 WLGTL-SA------LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGEEGLSVFKQEGLDI-QKASILPV 537 (795)
T ss_dssp EEEES-SC------EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEESSCEEEEEEETTEE-EECCCSCS
T ss_pred EEEec-Cc------eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeCCceEEEeCCCCeE-EEecCCCC
Confidence 99997 44 5666554333322221 111222222221111 03566777665555 443 22
Q ss_pred CCceeeceEEEEEe-CCEEEEecCCCCeEEEEcCC
Q 018242 325 GRKMWRSISEVEEK-DGNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 325 ~g~~~~~~~~~~~~-~g~l~ig~~~~~~l~~~~~~ 358 (359)
.+.....+..+..+ +|+||+|+.. +|.+++..
T Consensus 538 ~~l~~~~i~~i~~d~~g~lWigT~~--Gl~~~d~~ 570 (795)
T 4a2l_A 538 SNVTKLFTNCIYEASNGIIWVGTRE--GFYCFNEK 570 (795)
T ss_dssp CGGGGSCEEEEEECTTSCEEEEESS--CEEEEETT
T ss_pred CCCCCCeeEEEEECCCCCEEEEeCC--CceeECCC
Confidence 34444566777765 8999999973 78888753
No 45
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.70 E-value=1.3e-16 Score=158.70 Aligned_cols=223 Identities=13% Similarity=0.109 Sum_probs=153.2
Q ss_pred eCCCCCCceEEEccC-CCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCC
Q 018242 30 IEGAIGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNG 108 (359)
Q Consensus 30 ~~~~~~p~~i~~~~~-G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g 108 (359)
+..+..|++|++++. ++++|++...++|+++++++..... . ....+......|.||++++.++
T Consensus 402 ~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~------~----------~~~~i~~~~~~P~glavD~~~g 465 (699)
T 1n7d_A 402 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS------S----------YDTVISRDIQAPDGLAVDWIHS 465 (699)
T ss_dssp SCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-C------C----------CCCBCCSCC--CCCEECCCSSS
T ss_pred eccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCc------c----------eEEEEeCCCCCcceEEEEeeCC
Confidence 345678999999975 5666777888899999987620000 0 0001112234688999997689
Q ss_pred eEEEEeCC-CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEe
Q 018242 109 DLYIADAY-FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYD 187 (359)
Q Consensus 109 ~l~v~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 187 (359)
+||+++.. +.|.++++++...+.+.. .....|++|++|+++++||+++.+. .+.|++++
T Consensus 466 ~LY~tD~~~~~I~v~d~dg~~~~~l~~----~~~~~P~giavDp~~g~ly~td~~~----------------~~~I~~~~ 525 (699)
T 1n7d_A 466 NIYWTDSVLGTVSVADTKGVKRKTLFR----EQGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIKKGG 525 (699)
T ss_dssp BCEECCTTTSCEEEEBSSSCCEEEECC----CSSCCCCCEECCSSSSCCEECCCSS----------------SCCEEBCC
T ss_pred cEEEEeccCCeEEEEecCCCceEEEEe----CCCCCcceEEEccCCCcEEEcccCC----------------CCeEEEEe
Confidence 99999765 469999998876555432 1245789999998655599997541 24788888
Q ss_pred CCCCcEEEE-eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec---CCCCCCceEECCCCCEEEEE
Q 018242 188 PATKQVTVL-LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ---LPGFPDNIKRSPRGGFWVGI 263 (359)
Q Consensus 188 ~~~~~~~~~-~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~p~~i~~d~~G~lwv~~ 263 (359)
+++...+.+ ...+..|+||+++++++.|||+++..++|+++++++. .++.+.. ....|.+|++|.+ +||++.
T Consensus 526 ~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~~~~P~glavd~~-~lywtd 601 (699)
T 1n7d_A 526 LNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDEKRLAHPFSLAVFED-KVFWTD 601 (699)
T ss_dssp SSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS---CCEEECCCSSSCSSCCCCEEETT-EEEEEC
T ss_pred CCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC---ceEEEEecCCcCCCceEeEEECC-EEEEEe
Confidence 775433333 3457789999999988889999999999999998653 2233332 1245899999875 688888
Q ss_pred ecCCCccccccccCCc-cceeeecCCccceeeeee
Q 018242 264 HSRRKGISKLVLSFPW-IGNVLIKLPIDIVKIHSS 297 (359)
Q Consensus 264 ~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~ 297 (359)
+..+. |.++++ +|+.+..+..+...+..+
T Consensus 602 ~~~~~-----V~~~d~~~G~~~~~i~~~~~~P~~i 631 (699)
T 1n7d_A 602 IINEA-----IFSANRLTGSDVNLLAENLLSPEDM 631 (699)
T ss_dssp STTTC-----EEEEETTTEEEEECCCTTCSSCCCC
T ss_pred CCCCe-----EEEEEccCCCceEEeecCCCCCcEE
Confidence 77665 666654 788877776554444443
No 46
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.69 E-value=4.9e-15 Score=148.26 Aligned_cols=195 Identities=13% Similarity=0.145 Sum_probs=141.7
Q ss_pred eCCCCCCceEEEcc-CCCeeEEecCCCEEEEEEcCCcc----eEEEeecCCCCCCCCCCcccccccccccCCcceEEEEe
Q 018242 30 IEGAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRR----WLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFN 104 (359)
Q Consensus 30 ~~~~~~p~~i~~~~-~G~~l~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~ 104 (359)
+..+..|.+|++++ +++++|++..+++|+++++++.. ... .+......|.||++|
T Consensus 420 ~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~--------------------vi~~~l~~P~GLAvD 479 (791)
T 3m0c_C 420 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT--------------------VISRDIQAPDGLAVD 479 (791)
T ss_dssp ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEE--------------------EECSSCSCCCEEEEE
T ss_pred ecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeE--------------------EEecCCCCcceeeee
Confidence 34577899999998 57778888888999999987631 111 122244678999999
Q ss_pred cCCCeEEEEeCCC-cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceE
Q 018242 105 KTNGDLYIADAYF-GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRL 183 (359)
Q Consensus 105 ~~~g~l~v~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 183 (359)
..+++||+++... .|.++++++...+.+... .+..|++|++|+.+++||++|.+. .+.|
T Consensus 480 ~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~----~l~~P~gIaVDp~~g~LYwtD~g~----------------~~~I 539 (791)
T 3m0c_C 480 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWGT----------------PAKI 539 (791)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSEEEEEEC----TTCCEEEEEEETTTTEEEEEECSS----------------SCEE
T ss_pred ecCCcEEEEecCCCeEEEEeCCCCeEEEEEeC----CCCCcceEEEecCCCCEEEecCCC----------------CCeE
Confidence 8788999998764 599999998776655431 245689999999755599998652 2479
Q ss_pred EEEeCCCCcEEEEe-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-CC--CCCCceEECCCCCE
Q 018242 184 MKYDPATKQVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LP--GFPDNIKRSPRGGF 259 (359)
Q Consensus 184 ~~~d~~~~~~~~~~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~--~~p~~i~~d~~G~l 259 (359)
.+++.++...+.+. ..+..|+||++++.++.|||++...++|+++++++... ..+.. .. ..|.+|+++ .++|
T Consensus 540 ~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~---~~v~~~~~~l~~P~glav~-~~~l 615 (791)
T 3m0c_C 540 KKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR---KTILEDEKRLAHPFSLAVF-EDKV 615 (791)
T ss_dssp EEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEEECTTTTSSEEEEEEE-TTEE
T ss_pred EEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce---EEEecCCCccCCCCEEEEe-CCEE
Confidence 99999865554443 45678999999988888999999999999999876432 23322 11 236677775 3579
Q ss_pred EEEEecCCC
Q 018242 260 WVGIHSRRK 268 (359)
Q Consensus 260 wv~~~~~~~ 268 (359)
|++.+..+.
T Consensus 616 YwtD~~~~~ 624 (791)
T 3m0c_C 616 FWTDIINEA 624 (791)
T ss_dssp EEEETTTTE
T ss_pred EEEECCCCE
Confidence 999987664
No 47
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.69 E-value=2.5e-15 Score=133.01 Aligned_cols=185 Identities=14% Similarity=0.256 Sum_probs=131.1
Q ss_pred CCCCceEEE-ccCCCeeEEecC--CCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCe
Q 018242 33 AIGPESLAF-DALGEGPYTGVS--DGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGD 109 (359)
Q Consensus 33 ~~~p~~i~~-~~~G~~l~~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~ 109 (359)
+..|.++++ +++|+ +|++.. ++.|.+||+++.....+. ......|.++++++ +|+
T Consensus 76 ~~~p~~i~~~~~~g~-l~v~~~~~~~~i~~~d~~g~~~~~~~--------------------~~~~~~~~~i~~~~-~g~ 133 (286)
T 1q7f_A 76 LLYPNRVAVVRNSGD-IIVTERSPTHQIQIYNQYGQFVRKFG--------------------ATILQHPRGVTVDN-KGR 133 (286)
T ss_dssp BSSEEEEEEETTTTE-EEEEECGGGCEEEEECTTSCEEEEEC--------------------TTTCSCEEEEEECT-TSC
T ss_pred ccCceEEEEEcCCCe-EEEEcCCCCCEEEEECCCCcEEEEec--------------------CccCCCceEEEEeC-CCC
Confidence 468999999 57888 666653 689999997654333221 11224588999999 889
Q ss_pred EEEEeCC-CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeC
Q 018242 110 LYIADAY-FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDP 188 (359)
Q Consensus 110 l~v~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 188 (359)
+|+++.. +.|.++++++.....+... .....|++|+++++|+ +|+++.. .+.|.++++
T Consensus 134 l~v~~~~~~~i~~~~~~g~~~~~~~~~---~~~~~p~~i~~~~~g~-l~v~~~~-----------------~~~i~~~~~ 192 (286)
T 1q7f_A 134 IIVVECKVMRVIIFDQNGNVLHKFGCS---KHLEFPNGVVVNDKQE-IFISDNR-----------------AHCVKVFNY 192 (286)
T ss_dssp EEEEETTTTEEEEECTTSCEEEEEECT---TTCSSEEEEEECSSSE-EEEEEGG-----------------GTEEEEEET
T ss_pred EEEEECCCCEEEEEcCCCCEEEEeCCC---CccCCcEEEEECCCCC-EEEEECC-----------------CCEEEEEcC
Confidence 9999864 4699999876655443211 1234689999999999 9999643 457999998
Q ss_pred CCCcEEEEeCC--CCCCceEEEccCCCEEEEEecCCC-EEEEEEcCCCCCcceeEeec-C-CCCCCceEECCCCCEEEEE
Q 018242 189 ATKQVTVLLGN--LSFPNGVALSEDGNYILLAETTSC-RILRYWLKTSKAGTIEIVAQ-L-PGFPDNIKRSPRGGFWVGI 263 (359)
Q Consensus 189 ~~~~~~~~~~~--~~~p~gia~~~d~~~l~v~~~~~~-~i~~~~~~~~~~~~~~~~~~-~-~~~p~~i~~d~~G~lwv~~ 263 (359)
++..+..+... ...|.+++++++|+ +|+++..++ +|.+|+.++. ....+.. . ...|.+++++++|++|+++
T Consensus 193 ~g~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~g~---~~~~~~~~~~~~~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 193 EGQYLRQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQDGQ---LISALESKVKHAQCFDVALMDDGSVVLAS 268 (286)
T ss_dssp TCCEEEEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTTSC---EEEEEEESSCCSCEEEEEEETTTEEEEEE
T ss_pred CCCEEEEEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECCCCC---EEEEEcccCCCCcceeEEECCCCcEEEEC
Confidence 75544444322 36799999999986 899998876 9999985432 1222322 1 2247789999999999996
Q ss_pred e
Q 018242 264 H 264 (359)
Q Consensus 264 ~ 264 (359)
.
T Consensus 269 ~ 269 (286)
T 1q7f_A 269 K 269 (286)
T ss_dssp T
T ss_pred C
Confidence 4
No 48
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.69 E-value=2.5e-14 Score=129.66 Aligned_cols=254 Identities=10% Similarity=0.022 Sum_probs=161.7
Q ss_pred ecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC-CcEEEEeCCCCeE
Q 018242 51 GVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY-FGLLKVGPEGGLA 129 (359)
Q Consensus 51 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~-~~i~~~~~~~~~~ 129 (359)
++.++.|..+|++++++...-... .........|.+++++ ++++|++... +.|.++|++++++
T Consensus 13 g~~~~~l~~~d~~t~~~~~~i~~~--------------~n~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~ 76 (328)
T 3dsm_A 13 QYSNATLSYYDPATCEVENEVFYR--------------ANGFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKE 76 (328)
T ss_dssp TSCCBEEEEEETTTTEEECSHHHH--------------HHSSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCE
T ss_pred CCCCceEEEEECCCCEEhhhhHhh--------------hcCcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccEE
Confidence 344689999999988554210000 0001223457888886 7899999764 4599999998876
Q ss_pred EEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCCCC------CC
Q 018242 130 TAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLS------FP 203 (359)
Q Consensus 130 ~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~------~p 203 (359)
..... ....|.+++++++|+ +|+++.. .+.|.++|++++++........ .|
T Consensus 77 ~~~i~-----~~~~p~~i~~~~~g~-lyv~~~~-----------------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p 133 (328)
T 3dsm_A 77 VGRIT-----GFTSPRYIHFLSDEK-AYVTQIW-----------------DYRIFIINPKTYEITGYIECPDMDMESGST 133 (328)
T ss_dssp EEEEE-----CCSSEEEEEEEETTE-EEEEEBS-----------------CSEEEEEETTTTEEEEEEECTTCCTTTCBC
T ss_pred EEEcC-----CCCCCcEEEEeCCCe-EEEEECC-----------------CCeEEEEECCCCeEEEEEEcCCccccCCCc
Confidence 43222 134788999999996 9999532 4579999999887764333333 78
Q ss_pred ceEEEccCCCEEEEEec-CCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecC----------CCcccc
Q 018242 204 NGVALSEDGNYILLAET-TSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSR----------RKGISK 272 (359)
Q Consensus 204 ~gia~~~d~~~l~v~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~----------~~~~~~ 272 (359)
.++++ +++.+|+++. .+++|.++|+...+ .......+..|.++++|++|++|+++.+. +.
T Consensus 134 ~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~---~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~---- 204 (328)
T 3dsm_A 134 EQMVQ--YGKYVYVNCWSYQNRILKIDTETDK---VVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPS---- 204 (328)
T ss_dssp CCEEE--ETTEEEEEECTTCCEEEEEETTTTE---EEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCE----
T ss_pred ceEEE--ECCEEEEEcCCCCCEEEEEECCCCe---EEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCce----
Confidence 99999 4567999987 48899999976542 11122234568999999999999998764 22
Q ss_pred ccccCCc-cceeeecCCcc-ceeeeeecccccCcceEEEEECCCCCEEEEEEccCCce---------eeceEEEEEe--C
Q 018242 273 LVLSFPW-IGNVLIKLPID-IVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKM---------WRSISEVEEK--D 339 (359)
Q Consensus 273 ~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~---------~~~~~~~~~~--~ 339 (359)
+.++++ ++++...+..+ ...+..+++..+.. .++..+. .+..+....+.. ...+.++..+ +
T Consensus 205 -v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~--~lyv~~~---~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~ 278 (328)
T 3dsm_A 205 -LYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRD--TLYWINN---DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNN 278 (328)
T ss_dssp -EEEEETTTTEEEEEEECCTTCCCEEEEECTTSC--EEEEESS---SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTT
T ss_pred -EEEEECCCCeEEEEEecCCCCCceeEEEecCCC--EEEEEcc---EEEEEECCCCceeeeeeecCCCCceEEEEEcCCC
Confidence 555554 67777666543 12444444443222 2222222 122222212211 1345666653 7
Q ss_pred CEEEEec----CCCCeEEEEcCC
Q 018242 340 GNLWIGS----VNMPYAGLYNYS 358 (359)
Q Consensus 340 g~l~ig~----~~~~~l~~~~~~ 358 (359)
++||+++ ..+..|.+++.+
T Consensus 279 g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 279 GEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp CCEEEEECTTSSSEEEEEEECTT
T ss_pred CeEEEEcccccccCCEEEEECCC
Confidence 8999999 778899998864
No 49
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.68 E-value=1.5e-14 Score=141.68 Aligned_cols=197 Identities=15% Similarity=0.117 Sum_probs=147.6
Q ss_pred EEeeCCCCCCceEEEcc-CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEec
Q 018242 27 QYQIEGAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNK 105 (359)
Q Consensus 27 ~~~~~~~~~p~~i~~~~-~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~ 105 (359)
.+++.++..|.+|++|+ +|+++|++...+.|+++++++...+.+. ......|.||++|.
T Consensus 342 ~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~--------------------~~~~~~p~GlAvD~ 401 (619)
T 3s94_A 342 VLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVV--------------------TAQIAHPDGIAVDW 401 (619)
T ss_dssp ECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--------------------CSSCSCCCEEEEET
T ss_pred EEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEE--------------------ECCCCCcCceEEec
Confidence 34455677899999998 5777788888899999999876443331 22335689999997
Q ss_pred CCCeEEEEeCCC-cEEEEeCCCCeEEEEeecCCCccccccceEEEeCC-CCEEEEEeCCCccccccceeeeeecCCCceE
Q 018242 106 TNGDLYIADAYF-GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQS-TGIIYFTDSSSQFQRRNHISVILSGDKTGRL 183 (359)
Q Consensus 106 ~~g~l~v~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~-g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 183 (359)
.+++||+++... .|.+++.++...+.+.. ..+..|++|++||. |. ||++|.+. ...|
T Consensus 402 ~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~----~~l~~P~~iavdp~~G~-ly~tD~g~----------------~~~I 460 (619)
T 3s94_A 402 VARNLYWTDTGTDRIEVTRLNGTMRKILIS----EDLEEPRAIVLDPMVGY-MYWTDWGE----------------IPKI 460 (619)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEEC----TTCCSEEEEEEETTTTE-EEEEECSS----------------SCEE
T ss_pred ccCcEEEEeCCCCcEEEEeCCCCeEEEEEE----CCCCCeeeEEEEcCCCc-EEEecCCC----------------CCEE
Confidence 789999998754 58888988765544432 13568999999986 66 99998652 3479
Q ss_pred EEEeCCCCcEEEE-eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEee-cCCCCCCceEECCCCCEEE
Q 018242 184 MKYDPATKQVTVL-LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA-QLPGFPDNIKRSPRGGFWV 261 (359)
Q Consensus 184 ~~~d~~~~~~~~~-~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~p~~i~~d~~G~lwv 261 (359)
++.+.++...+.+ ...+..|+||+++++++.|||+++..++|.++++++... +.+. ..-..|.+|+++. ++||+
T Consensus 461 ~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~---~~~~~~~l~~P~glav~~-~~ly~ 536 (619)
T 3s94_A 461 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGR---RVLVEDKIPHIFGFTLLG-DYVYW 536 (619)
T ss_dssp EEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC---EEEEECCCCSSCCEEEET-TEEEE
T ss_pred EEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCce---EEEeccCCCCcEEEEEEC-CEEEE
Confidence 9998875444333 345788999999998888999999999999999876432 3332 2234589999975 48999
Q ss_pred EEecCCC
Q 018242 262 GIHSRRK 268 (359)
Q Consensus 262 ~~~~~~~ 268 (359)
+.+..+.
T Consensus 537 tD~~~~~ 543 (619)
T 3s94_A 537 TDWQRRS 543 (619)
T ss_dssp ECTTSSC
T ss_pred eecCCCe
Confidence 9988665
No 50
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.67 E-value=1.8e-14 Score=134.63 Aligned_cols=196 Identities=16% Similarity=0.207 Sum_probs=136.2
Q ss_pred CCCCceEEEccCCCeeEEecCCC--EEEEEEcCCcce-EEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCe
Q 018242 33 AIGPESLAFDALGEGPYTGVSDG--RIIKWHQDQRRW-LHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGD 109 (359)
Q Consensus 33 ~~~p~~i~~~~~G~~l~~~~~~~--~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~ 109 (359)
...|. ++++++|+.+|++...+ .|+++++.++.. ..+.. ........|+++++++++++
T Consensus 171 ~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~-----------------~~~~~~~~p~~iav~p~~g~ 232 (409)
T 3hrp_A 171 FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQ-----------------LGSTFSGKIGAVALDETEEW 232 (409)
T ss_dssp CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEE-----------------CCTTSCSCCCBCEECTTSSE
T ss_pred CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeee-----------------ccchhcCCcEEEEEeCCCCe
Confidence 46788 99999998788776644 899999876532 12110 00113356889999998899
Q ss_pred EEEEeCCCcEEEEeCCCCeEEEEeec-CCCccccccc-eEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEe
Q 018242 110 LYIADAYFGLLKVGPEGGLATAVATQ-SEGIPFRFCN-SLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYD 187 (359)
Q Consensus 110 l~v~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~-~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 187 (359)
||+++..+.|++++++++..+.+... ..+.....|. ++++++++.+||+++.. .+.|++++
T Consensus 233 lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~-----------------~~~I~~~~ 295 (409)
T 3hrp_A 233 LYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN-----------------LSSVYKIT 295 (409)
T ss_dssp EEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT-----------------TTEEEEEC
T ss_pred EEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC-----------------CCEEEEEe
Confidence 99987655699999998875544221 1111112344 99999954449999764 35799999
Q ss_pred CCCCcEEEEeCC---------------CCCCceEEEccCCCEEEEEec-CCCEEEEEEcCCCCCcceeEeecC-------
Q 018242 188 PATKQVTVLLGN---------------LSFPNGVALSEDGNYILLAET-TSCRILRYWLKTSKAGTIEIVAQL------- 244 (359)
Q Consensus 188 ~~~~~~~~~~~~---------------~~~p~gia~~~d~~~l~v~~~-~~~~i~~~~~~~~~~~~~~~~~~~------- 244 (359)
+++ ....+... +..|++++++++|+ +|+++. .+++|.+|++.... ...+...
T Consensus 296 ~~g-~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~G~---v~~~~g~~~~~g~~ 370 (409)
T 3hrp_A 296 PDG-ECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILDGY---VSTVAGQVDVASQI 370 (409)
T ss_dssp TTC-CEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTTTE---EEEEEECTTCBSCC
T ss_pred cCC-CEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCCCE---EEEEeCCCCCCCcC
Confidence 875 44444321 45699999999998 999999 99999999954332 2222211
Q ss_pred --------CCCCCceEECCCCCEEEEEecCCC
Q 018242 245 --------PGFPDNIKRSPRGGFWVGIHSRRK 268 (359)
Q Consensus 245 --------~~~p~~i~~d~~G~lwv~~~~~~~ 268 (359)
-..|.++++|++|+|||+...++.
T Consensus 371 ~g~~~~~~~~~P~giavd~~g~lyVad~~n~~ 402 (409)
T 3hrp_A 371 DGTPLEATFNYPYDICYDGEGGYWIAEAWGKA 402 (409)
T ss_dssp CBSTTTCCBSSEEEEEECSSSEEEEEESTTCE
T ss_pred CCChhceEeCCceEEEEcCCCCEEEEECCCCe
Confidence 124889999999999999987653
No 51
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.67 E-value=7.9e-14 Score=129.75 Aligned_cols=223 Identities=13% Similarity=0.080 Sum_probs=147.8
Q ss_pred eEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCCC-cEEEEeCCC
Q 018242 48 PYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYF-GLLKVGPEG 126 (359)
Q Consensus 48 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~~-~i~~~~~~~ 126 (359)
++++.. ..|.++++++.....+ ......|.+|++++.++.||+++... .|+++++++
T Consensus 86 ll~~~~-~~I~~i~l~~~~~~~~---------------------~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g 143 (400)
T 3p5b_L 86 LFFTNR-HEVRKMTLDRSEYTSL---------------------IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDR 143 (400)
T ss_dssp EEEEET-TEEEEECTTSCSCEEE---------------------ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC--
T ss_pred eEEecc-ceeEEEccCCcceeEe---------------------ccccCcceEEeeeeccCceEEEecCCCeEEEEEccc
Confidence 333333 6899999887644432 22345688999998889999998754 599999876
Q ss_pred C----eEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEe-CCCC
Q 018242 127 G----LATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLL-GNLS 201 (359)
Q Consensus 127 ~----~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~ 201 (359)
. ..+.+.. .....|.+|++|+.++.||++|.. .+.|.++++++...+.+. ..+.
T Consensus 144 ~~~~~~~~~~~~----~~~~~p~glavD~~~~~lY~~d~~-----------------~~~I~~~~~~g~~~~~l~~~~~~ 202 (400)
T 3p5b_L 144 AHGVSSYDTVIS----RDIQAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGS 202 (400)
T ss_dssp ----CCCEEEEC----SSCSCEEEEEEETTTTEEEEEETT-----------------TTEEEEECTTTCSEEEEEECSSC
T ss_pred CCCCCcceEEEe----CCCCCcccEEEEecCCceEEEECC-----------------CCeEEEEeCCCCceEEEEeCCCC
Confidence 3 2222222 134578999999844449999765 347999999876555443 4677
Q ss_pred CCceEEEccCCCEEEEEecC-CCEEEEEEcCCCCCcceeEeec-CCCCCCceEECC-CCCEEEEEecCCCccccccccCC
Q 018242 202 FPNGVALSEDGNYILLAETT-SCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSP-RGGFWVGIHSRRKGISKLVLSFP 278 (359)
Q Consensus 202 ~p~gia~~~d~~~l~v~~~~-~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~ 278 (359)
.|++|+++|.++.|||++.. .++|+++++++.. ...+.. .-..|.+|++|+ .++||++....+
T Consensus 203 ~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~---~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~----------- 268 (400)
T 3p5b_L 203 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSKLH----------- 268 (400)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS---CEEEECSSCSCEEEEEEETTTTEEEEEETTTT-----------
T ss_pred CcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc---cEEEEECCCCceEEEEEEeCCCEEEEEECCCC-----------
Confidence 89999999988889999976 4789999987642 222322 224699999996 567999986533
Q ss_pred ccceeeecCCccceeeeeecccccCcceEEEEECCCCCEEEEEEccCCceeeceEEEEEeCCEEEEecCCCCeEEEEc
Q 018242 279 WIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEKDGNLWIGSVNMPYAGLYN 356 (359)
Q Consensus 279 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~l~ig~~~~~~l~~~~ 356 (359)
.+.+++.+|...+.+....+ ....+.++...+++||+..+.+.+|.+++
T Consensus 269 ----------------------------~I~~~d~dG~~~~~~~~~~~-~l~~P~gl~v~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 269 ----------------------------SISSIDVNGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp ----------------------------EEEEEETTSCCCEEEEECSS-TTSSEEEEEEETTEEEEEESSSCSEEEEE
T ss_pred ----------------------------EEEEEeCCCCccEEEEeCCC-CCCCCEEEEEeCCEEEEecCCCCeEEEEE
Confidence 34445555543333322111 12344455557778888888778777776
No 52
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.66 E-value=2.1e-13 Score=122.85 Aligned_cols=196 Identities=12% Similarity=0.022 Sum_probs=129.4
Q ss_pred EEeeCCCCCCceEEEccCCCeeEEecC-CCEEEEEEcCCcce-EEEeecCCCCCCCCCCcccccccccccCCcceE-EEE
Q 018242 27 QYQIEGAIGPESLAFDALGEGPYTGVS-DGRIIKWHQDQRRW-LHFARTSPNRDGCEGAYEYDHAAKEHICGRPLG-LCF 103 (359)
Q Consensus 27 ~~~~~~~~~p~~i~~~~~G~~l~~~~~-~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g-i~~ 103 (359)
++..+ ...| +++++++|+.+|++.. ++.|+.||+.+++. ... . .....|.. +++
T Consensus 35 ~~~~~-~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~--------------------~-~~~~~~~~~~~~ 91 (331)
T 3u4y_A 35 QITLG-YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVA--------------------I-QEGQSSMADVDI 91 (331)
T ss_dssp EEECC-CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEE--------------------E-EECSSCCCCEEE
T ss_pred eEEcc-CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEe--------------------c-ccCCCCccceEE
Confidence 44433 4566 9999999996776655 78999999988753 211 1 12234666 999
Q ss_pred ecCCCeEEEEeCCC---cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCC
Q 018242 104 NKTNGDLYIADAYF---GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKT 180 (359)
Q Consensus 104 ~~~~g~l~v~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~ 180 (359)
++++..++++...+ .|..+|.++++....... ...+++++++|+|+++|+++... ..
T Consensus 92 s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-----~~~~~~~~~spdg~~l~~~~~~~---------------~~ 151 (331)
T 3u4y_A 92 TPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-----PYDAVGIAISPNGNGLILIDRSS---------------AN 151 (331)
T ss_dssp CTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-----CTTEEEEEECTTSSCEEEEEETT---------------TT
T ss_pred CCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-----CCCccceEECCCCCEEEEEecCC---------------Cc
Confidence 99555566433332 699999998876543321 23568999999998799985431 11
Q ss_pred -ceEEEEeCCCCcEE----EEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcc-eeEeecCCCCCCceEEC
Q 018242 181 -GRLMKYDPATKQVT----VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGT-IEIVAQLPGFPDNIKRS 254 (359)
Q Consensus 181 -g~v~~~d~~~~~~~----~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~p~~i~~d 254 (359)
-.+|.++.+ +.+. ........|.+++++||++.+|++...++.|.+|++...+... ...+ .....|.+++++
T Consensus 152 ~i~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~~~~s 229 (331)
T 3u4y_A 152 TVRRFKIDAD-GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAV-GTNNLPGTIVVS 229 (331)
T ss_dssp EEEEEEECTT-CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEE-ECSSCCCCEEEC
T ss_pred eEEEEEECCC-CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeec-cCCCCCceEEEC
Confidence 234455433 2221 1223345689999999999999999989999999986543311 1122 234568899999
Q ss_pred CCCC-EEEEEecCC
Q 018242 255 PRGG-FWVGIHSRR 267 (359)
Q Consensus 255 ~~G~-lwv~~~~~~ 267 (359)
++|+ +|++....+
T Consensus 230 pdg~~l~v~~~~~~ 243 (331)
T 3u4y_A 230 RDGSTVYVLTESTV 243 (331)
T ss_dssp TTSSEEEEECSSEE
T ss_pred CCCCEEEEEEcCCC
Confidence 9998 777765433
No 53
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.66 E-value=7.8e-14 Score=125.68 Aligned_cols=196 Identities=14% Similarity=0.085 Sum_probs=132.3
Q ss_pred CcceEEEEecCCCeEEEEeCCC-cEEEEeCCCCeE-EEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceee
Q 018242 96 GRPLGLCFNKTNGDLYIADAYF-GLLKVGPEGGLA-TAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISV 173 (359)
Q Consensus 96 ~~p~gi~~~~~~g~l~v~~~~~-~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~ 173 (359)
..+.++.+++.++.||+++... .|.+++++++.. +.+.. .....|.++++|+.++.||++|..
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~----~~l~~p~glavd~~~g~ly~~d~~----------- 99 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV----SGLLSPDGLACDWLGEKLYWTDSE----------- 99 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE----ECCSCCCEEEEETTTTEEEEEETT-----------
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc----CCCCCccEEEEEcCCCeEEEEECC-----------
Confidence 3467899998789999998754 599999987632 11211 123478899999754449999765
Q ss_pred eeecCCCceEEEEeCCCCcEEEEe-CCCCCCceEEEccCCCEEEEEecC-CCEEEEEEcCCCCCcceeEeec-CCCCCCc
Q 018242 174 ILSGDKTGRLMKYDPATKQVTVLL-GNLSFPNGVALSEDGNYILLAETT-SCRILRYWLKTSKAGTIEIVAQ-LPGFPDN 250 (359)
Q Consensus 174 ~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~p~gia~~~d~~~l~v~~~~-~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~ 250 (359)
.+.|.++++++...+.+. .....|++|+++|.++.+||++.. .++|+++++++.. .+.+.. .-..|++
T Consensus 100 ------~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~~~~~l~~Png 170 (318)
T 3sov_A 100 ------TNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS---RFIIINSEIYWPNG 170 (318)
T ss_dssp ------TTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS---CEEEECSSCSCEEE
T ss_pred ------CCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC---eEEEEECCCCCccE
Confidence 347999998865444443 567789999999987789999965 6899999987542 223322 2245999
Q ss_pred eEECC-CCCEEEEEecCCCccccccccCCccceeeecCCccceeeeeecccccCcceEEEEECCCCCEEEEEEccCCcee
Q 018242 251 IKRSP-RGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMW 329 (359)
Q Consensus 251 i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~ 329 (359)
|++|+ +++||++....+ .+.+++.+|...+.+... . .
T Consensus 171 lavd~~~~~lY~aD~~~~---------------------------------------~I~~~d~dG~~~~~~~~~-~--~ 208 (318)
T 3sov_A 171 LTLDYEEQKLYWADAKLN---------------------------------------FIHKSNLDGTNRQAVVKG-S--L 208 (318)
T ss_dssp EEEETTTTEEEEEETTTT---------------------------------------EEEEEETTSCSCEEEECS-C--C
T ss_pred EEEeccCCEEEEEECCCC---------------------------------------EEEEEcCCCCceEEEecC-C--C
Confidence 99997 567999987543 344444444333332221 1 2
Q ss_pred eceEEEEEeCCEEEEecCCCCeEEEEcC
Q 018242 330 RSISEVEEKDGNLWIGSVNMPYAGLYNY 357 (359)
Q Consensus 330 ~~~~~~~~~~g~l~ig~~~~~~l~~~~~ 357 (359)
..+.++..+++.||++.+.+..|.+++.
T Consensus 209 ~~P~glav~~~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 209 PHPFALTLFEDILYWTDWSTHSILACNK 236 (318)
T ss_dssp SCEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred CCceEEEEeCCEEEEEecCCCeEEEEEC
Confidence 3444555566777777777777777665
No 54
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.66 E-value=1.4e-13 Score=124.78 Aligned_cols=190 Identities=14% Similarity=0.169 Sum_probs=137.9
Q ss_pred CceEEEccCCCeeEEec--CCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 36 PESLAFDALGEGPYTGV--SDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
|++++++++|+.+|++. .++.|+.||+.+.+.... +......|.+++++++++.+|++
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~--------------------~~~~~~~~~~~~~s~dg~~l~~~ 202 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTA--------------------IQNTGKMSTGLALDSEGKRLYTT 202 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEE--------------------ECCCCTTCCCCEEETTTTEEEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEE--------------------ecCCCCccceEEECCCCCEEEEE
Confidence 78999999999888776 367899999987743321 11122347889999966778888
Q ss_pred eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcE
Q 018242 114 DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQV 193 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 193 (359)
+..+.|..+|..+++...........+...+.+++++++|+++|+++.. .+.|+.+|+++++.
T Consensus 203 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----------------~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 203 NADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK-----------------AAEVLVVDTRNGNI 265 (353)
T ss_dssp CTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS-----------------SSEEEEEETTTCCE
T ss_pred cCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC-----------------CCEEEEEECCCCcE
Confidence 7766799999998876543332111123467789999999989998532 45799999987776
Q ss_pred EEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCC-EEEEEecC
Q 018242 194 TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIHSR 266 (359)
Q Consensus 194 ~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~~~ 266 (359)
..... ...+.++++++|++.+|+++..++.|.+||....+ .......+..|.+++++++|+ +|++....
T Consensus 266 ~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 266 LAKVA-APESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK---VVKTFDTPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEEEE-CSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTE---EEEEEECCSEEEEEEECTTSCEEEEEEECC
T ss_pred EEEEE-cCCCceEEECCCCCEEEEEECCCCeEEEEECCCCe---EEEEEecCCCCCeEEEcCCCCEEEEEEccc
Confidence 54332 23467899999999999999889999999975432 111223445688999999997 88887653
No 55
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.65 E-value=2.2e-14 Score=140.63 Aligned_cols=204 Identities=13% Similarity=0.078 Sum_probs=145.5
Q ss_pred EEeeCCCCCCceEEEcc-CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEec
Q 018242 27 QYQIEGAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNK 105 (359)
Q Consensus 27 ~~~~~~~~~p~~i~~~~-~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~ 105 (359)
.+++.++..+.+|++|+ +++++|++...++|+++++++....++-... . ........|.||++|.
T Consensus 333 ~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~-~-------------~~~~~~~~p~glAvD~ 398 (628)
T 4a0p_A 333 ILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSS-V-------------PSQNLEIQPYDLSIDI 398 (628)
T ss_dssp ECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----------------------CCCEEEEEEET
T ss_pred EEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcc-c-------------ccccccCCcceEEeec
Confidence 34455667788999998 4777888999999999998875333221000 0 0001335689999999
Q ss_pred CCCeEEEEeCCC-cEEEEeCCCCeEEEEeecCCCccccccceEEEeC-CCCEEEEEeCCCccccccceeeeeecCCCceE
Q 018242 106 TNGDLYIADAYF-GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQ-STGIIYFTDSSSQFQRRNHISVILSGDKTGRL 183 (359)
Q Consensus 106 ~~g~l~v~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~-~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 183 (359)
..++||+++... .|.+++.++...+.+... ....|++|++|| +|. ||++|.+. ..++|
T Consensus 399 ~~~nLY~td~~~~~I~v~~~~G~~~~~l~~~----~l~~Pr~iavdp~~g~-ly~tD~g~---------------~~~~I 458 (628)
T 4a0p_A 399 YSRYIYWTCEATNVINVTRLDGRSVGVVLKG----EQDRPRAVVVNPEKGY-MYFTNLQE---------------RSPKI 458 (628)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCEEEEEEEC----TTCCEEEEEEETTTTE-EEEEEEET---------------TEEEE
T ss_pred cCCeEEEEcCCCCEEEEEECCCCeEEEEEeC----CCCceeeEEEecCCCe-EEEeecCC---------------CCCeE
Confidence 789999998754 588888876654444331 345799999999 566 99997642 11379
Q ss_pred EEEeCCCCcEEEE-eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-CCCCCCceEECCCCCEEE
Q 018242 184 MKYDPATKQVTVL-LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGGFWV 261 (359)
Q Consensus 184 ~~~d~~~~~~~~~-~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwv 261 (359)
++.++++...+.+ ...+..|+||+++++++.|||+++..+.|.++++++.. ++.+.. ....|.+|+++. |+||+
T Consensus 459 ~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~---r~~~~~~~~~~P~glav~~-~~ly~ 534 (628)
T 4a0p_A 459 ERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGAN---RIVLEDSNILQPVGLTVFE-NWLYW 534 (628)
T ss_dssp EEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECSSCSCEEEEEEET-TEEEE
T ss_pred EEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCc---eEEEEcCCCCCcEEEEEEC-CEEEE
Confidence 9999986544444 34678899999999888899999999999999987643 344442 234589999986 78999
Q ss_pred EEecCCC
Q 018242 262 GIHSRRK 268 (359)
Q Consensus 262 ~~~~~~~ 268 (359)
+.+....
T Consensus 535 tD~~~~~ 541 (628)
T 4a0p_A 535 IDKQQQM 541 (628)
T ss_dssp EETTTTE
T ss_pred EECCCCe
Confidence 9987664
No 56
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.65 E-value=7.5e-14 Score=139.73 Aligned_cols=198 Identities=14% Similarity=0.089 Sum_probs=134.7
Q ss_pred CCcceEEEEecCCCeEEEEeCCC-cEEEEeCCCCe----EEEEeecCCCccccccceEEEeCCCCEEEEEeCCCcccccc
Q 018242 95 CGRPLGLCFNKTNGDLYIADAYF-GLLKVGPEGGL----ATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRN 169 (359)
Q Consensus 95 ~~~p~gi~~~~~~g~l~v~~~~~-~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~ 169 (359)
...|.+|+++..++.||+++... .|+++++++.. .+.+.. .....|.+|++|..++.||++|..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~----~~l~~P~GLAvD~~~~~LY~tD~~------- 491 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS----RDIQAPDGLAVDWIHSNIYWTDSV------- 491 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC----SSCSCCCEEEEETTTTEEEEEETT-------
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe----cCCCCcceeeeeecCCcEEEEecC-------
Confidence 45688999998889999998764 58999987632 222222 134578999999887669999865
Q ss_pred ceeeeeecCCCceEEEEeCCCCcEEEEe-CCCCCCceEEEccCCCEEEEEecCC-CEEEEEEcCCCCCcceeEeec-CCC
Q 018242 170 HISVILSGDKTGRLMKYDPATKQVTVLL-GNLSFPNGVALSEDGNYILLAETTS-CRILRYWLKTSKAGTIEIVAQ-LPG 246 (359)
Q Consensus 170 ~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~p~gia~~~d~~~l~v~~~~~-~~i~~~~~~~~~~~~~~~~~~-~~~ 246 (359)
.+.|.++++++...+.+. ..+..|++|++++.++.|||++... ++|+++++++.. +..+.. .-.
T Consensus 492 ----------~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~---~~~lv~~~l~ 558 (791)
T 3m0c_C 492 ----------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---IYSLVTENIQ 558 (791)
T ss_dssp ----------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC---EEEEECSSCS
T ss_pred ----------CCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc---eEEEEeCCCC
Confidence 347999999866555443 5677899999999888899999876 899999987542 233333 224
Q ss_pred CCCceEECC-CCCEEEEEecCCCccccccccCCccceeeecCCccceeeeeecccccCcceEEEEECCCCCEEEEEEccC
Q 018242 247 FPDNIKRSP-RGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIG 325 (359)
Q Consensus 247 ~p~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 325 (359)
.|.+|++|+ .|+||++..... .+.+++.+|.....+....
T Consensus 559 ~P~GLavD~~~~~LYwaD~~~~---------------------------------------~I~~~d~dG~~~~~v~~~~ 599 (791)
T 3m0c_C 559 WPNGITLDLLSGRLYWVDSKLH---------------------------------------SISSIDVNGGNRKTILEDE 599 (791)
T ss_dssp CEEEEEEETTTTEEEEEETTTT---------------------------------------EEEEEETTSCSCEEEEECT
T ss_pred CceEEEEecCCCeEEEEeCCCC---------------------------------------cEEEEecCCCceEEEecCC
Confidence 599999995 678999986533 3444555544333332211
Q ss_pred CceeeceEEEEEeCCEEEEecCCCCeEEEEc
Q 018242 326 RKMWRSISEVEEKDGNLWIGSVNMPYAGLYN 356 (359)
Q Consensus 326 g~~~~~~~~~~~~~g~l~ig~~~~~~l~~~~ 356 (359)
+ .+..+.++...+++||++.+.++.|.+++
T Consensus 600 ~-~l~~P~glav~~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 600 K-RLAHPFSLAVFEDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp T-TTSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred C-ccCCCCEEEEeCCEEEEEECCCCEEEEEe
Confidence 1 12344455556778888888778777765
No 57
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.63 E-value=1e-14 Score=131.67 Aligned_cols=189 Identities=11% Similarity=0.164 Sum_probs=130.1
Q ss_pred CCCceEEEcc-CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE
Q 018242 34 IGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI 112 (359)
Q Consensus 34 ~~p~~i~~~~-~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v 112 (359)
..|.+|++++ +|+ +|++...++|+++|+++++++.+... ........|.++++++++|++|+
T Consensus 80 ~~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~~~~~~~----------------~~~~~~~~p~~i~~d~~~G~l~v 142 (322)
T 2fp8_A 80 GRTYDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHATQLATS----------------VDGVPFKWLYAVTVDQRTGIVYF 142 (322)
T ss_dssp CCEEEEEEETTTTE-EEEEETTTEEEEECTTCEECEEEESE----------------ETTEECSCEEEEEECTTTCCEEE
T ss_pred CCCceEEEcCCCCc-EEEEECCCCEEEEeCCCCEEEEeccc----------------CCCCcccccceEEEecCCCEEEE
Confidence 3689999997 787 88876667899999987655554311 00011245889999985689999
Q ss_pred EeCC------------------CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeee
Q 018242 113 ADAY------------------FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVI 174 (359)
Q Consensus 113 ~~~~------------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~ 174 (359)
++.. ++|+++++++++++.+.. ....|++|+++++|++||+++..
T Consensus 143 ~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-----~~~~p~gia~~~dg~~lyv~d~~------------ 205 (322)
T 2fp8_A 143 TDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-----ELHVPGGAEVSADSSFVLVAEFL------------ 205 (322)
T ss_dssp EESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-----EESCCCEEEECTTSSEEEEEEGG------------
T ss_pred ECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc-----CCccCcceEECCCCCEEEEEeCC------------
Confidence 9754 359999998887765433 23578999999999889999653
Q ss_pred eecCCCceEEEEeCCC---CcEEEEeCCCCCCceEEEccCCCEEEEEecC----------CCEEEEEEcCCCCCcceeEe
Q 018242 175 LSGDKTGRLMKYDPAT---KQVTVLLGNLSFPNGVALSEDGNYILLAETT----------SCRILRYWLKTSKAGTIEIV 241 (359)
Q Consensus 175 ~~~~~~g~v~~~d~~~---~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~----------~~~i~~~~~~~~~~~~~~~~ 241 (359)
.+.|++++.++ +..+.+.. ...|.+++++++|+ +|++... .++|.+++.++. ....+
T Consensus 206 -----~~~I~~~~~~~~~~~~~~~~~~-~~gP~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~---~~~~~ 275 (322)
T 2fp8_A 206 -----SHQIVKYWLEGPKKGTAEVLVK-IPNPGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGN---ILEVI 275 (322)
T ss_dssp -----GTEEEEEESSSTTTTCEEEEEE-CSSEEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSC---EEEEE
T ss_pred -----CCeEEEEECCCCcCCccceEEe-CCCCCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCC---EEEEE
Confidence 34799998874 23333322 22399999999997 8998865 467899975432 12223
Q ss_pred ecCC----CCCCceEECCCCCEEEEEecCC
Q 018242 242 AQLP----GFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 242 ~~~~----~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
.... ..|.+++. .+|+||+++...+
T Consensus 276 ~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~ 304 (322)
T 2fp8_A 276 PLPPPFAGEHFEQIQE-HDGLLYIGTLFHG 304 (322)
T ss_dssp ECCTTTTTSCCCEEEE-ETTEEEEECSSCS
T ss_pred ECCCCCccccceEEEE-eCCEEEEeecCCC
Confidence 2221 23556666 4789999986544
No 58
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.62 E-value=1.2e-13 Score=125.88 Aligned_cols=199 Identities=13% Similarity=0.161 Sum_probs=135.0
Q ss_pred CCCCCceEEEccCCCeeEEecC-----CCEEEEEEcCCcce-EEEeecCCCCCCCCCCcccccccccccCCcceEEEEec
Q 018242 32 GAIGPESLAFDALGEGPYTGVS-----DGRIIKWHQDQRRW-LHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNK 105 (359)
Q Consensus 32 ~~~~p~~i~~~~~G~~l~~~~~-----~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~ 105 (359)
.+..|.++++|++|++|+++.. .++|++||+++++. ..+..+. ........+.++++++
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~---------------~~~~~~~~~~~v~vd~ 129 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPP---------------PITLSNSFVNDLAVDL 129 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCT---------------TTSCTTCCCCEEEEET
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECCh---------------hhcccccccceEEEec
Confidence 4679999999999995556655 47999999988763 3332110 0011123468999998
Q ss_pred CCCeEEEEeC----CCcEEEEeCCCCeEEEEeec---C---------CCcc-------------ccccceEEEeCCCCEE
Q 018242 106 TNGDLYIADA----YFGLLKVGPEGGLATAVATQ---S---------EGIP-------------FRFCNSLDIDQSTGII 156 (359)
Q Consensus 106 ~~g~l~v~~~----~~~i~~~~~~~~~~~~~~~~---~---------~~~~-------------~~~~~~l~~d~~g~~l 156 (359)
+++.+|+++. ..+|+++++++++...+... . .+.. ...+++|+++++|++|
T Consensus 130 ~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~l 209 (343)
T 2qe8_A 130 IHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWL 209 (343)
T ss_dssp TTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEE
T ss_pred CCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEE
Confidence 6789999986 34699999987776544321 0 0000 1247899999999889
Q ss_pred EEEeCCCccccccceeeeeecCCCceEEEEeCCC---C---------cEEEEeCCCCCCceEEEccCCCEEEEEecCCCE
Q 018242 157 YFTDSSSQFQRRNHISVILSGDKTGRLMKYDPAT---K---------QVTVLLGNLSFPNGVALSEDGNYILLAETTSCR 224 (359)
Q Consensus 157 ~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~---~---------~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~ 224 (359)
|+++.. ...+++++... + .+... .....|.|++++++|+ +|+++..+++
T Consensus 210 y~~~~~-----------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~-l~va~~~~~~ 270 (343)
T 2qe8_A 210 YLSPMH-----------------STSMYRIKSADLSNLQLTDAELGSKIERY-SEKPICDGISIDKDHN-IYVGDLAHSA 270 (343)
T ss_dssp EEEESS-----------------CSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTTCC-EEEEEGGGTE
T ss_pred EEEeCC-----------------CCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCCceEEECCCCC-EEEEccCCCe
Confidence 999653 23688887421 1 01111 1223689999999986 9999999999
Q ss_pred EEEEEcCCCCCcceeEeecC--CCCCCceEECCCCCEEEEEecCC
Q 018242 225 ILRYWLKTSKAGTIEIVAQL--PGFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 225 i~~~~~~~~~~~~~~~~~~~--~~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
|.+|+.... ....+... ...|.+++++++|+||+++...+
T Consensus 271 V~~~d~~~G---~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 271 IGVITSADR---AYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp EEEEETTTT---EEEEEEECGGGSCEEEEEECTTSCEEEEECCGG
T ss_pred EEEEECCCC---CEEEEEECCceecCCeeEECCCCcEEEEeCccc
Confidence 999997222 23333332 24589999999999999887643
No 59
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.61 E-value=2.8e-12 Score=118.21 Aligned_cols=204 Identities=14% Similarity=0.162 Sum_probs=142.8
Q ss_pred CCCceEEEccCCCeeEE-ecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE
Q 018242 34 IGPESLAFDALGEGPYT-GVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI 112 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v 112 (359)
..|.+++++++|+.+|+ +..++.|..||..+++.... + .....+.++++++++..|++
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~--------------------~-~~~~~v~~~~~spdg~~l~~ 90 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIAT--------------------V-PAGSSPQGVAVSPDGKQVYV 90 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEE--------------------E-ECSSSEEEEEECTTSSEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEE--------------------E-ECCCCccceEECCCCCEEEE
Confidence 46899999999986654 55789999999987754322 1 11236789999996666888
Q ss_pred EeCC-CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCC
Q 018242 113 ADAY-FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATK 191 (359)
Q Consensus 113 ~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 191 (359)
+... +.|..+|..+++....... ...+..++++++|+++|++.. ..+.|+.+|..++
T Consensus 91 ~~~~~~~v~v~d~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~~~-----------------~~~~v~~~d~~~~ 148 (391)
T 1l0q_A 91 TNMASSTLSVIDTTSNTVAGTVKT-----GKSPLGLALSPDGKKLYVTNN-----------------GDKTVSVINTVTK 148 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEEC-----SSSEEEEEECTTSSEEEEEET-----------------TTTEEEEEETTTT
T ss_pred EECCCCEEEEEECCCCeEEEEEeC-----CCCcceEEECCCCCEEEEEeC-----------------CCCEEEEEECCCC
Confidence 8654 5699999998876543331 135678999999997878743 2468999999887
Q ss_pred cEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCC-EEEEEe--cCCC
Q 018242 192 QVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIH--SRRK 268 (359)
Q Consensus 192 ~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~--~~~~ 268 (359)
+..........+..++++++++.+|++...++.|..||+.... ..........+.+++++++|+ +|++.. ..+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~---~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~ 225 (391)
T 1l0q_A 149 AVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS---VIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNT 225 (391)
T ss_dssp EEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE---EEEEEECSSEEEEEEECTTSSEEEEEEECSSCCE
T ss_pred cEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCe---EEEEEecCCCccceEECCCCCEEEEEecCcCCCc
Confidence 7665544456679999999999999999889999999976532 111222334567899999996 666664 2232
Q ss_pred ccccccccCC-ccceeeecCC
Q 018242 269 GISKLVLSFP-WIGNVLIKLP 288 (359)
Q Consensus 269 ~~~~~~~~~~-~~g~~~~~~~ 288 (359)
+..++ ..++.+..++
T Consensus 226 -----v~~~d~~~~~~~~~~~ 241 (391)
T 1l0q_A 226 -----VSMIDTGTNKITARIP 241 (391)
T ss_dssp -----EEEEETTTTEEEEEEE
T ss_pred -----EEEEECCCCeEEEEEe
Confidence 44444 3455555443
No 60
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.61 E-value=1.6e-12 Score=117.07 Aligned_cols=197 Identities=12% Similarity=0.171 Sum_probs=127.7
Q ss_pred CCCCceEEEccCCCeeEEecCC-CEEEEEEcC--CcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCe
Q 018242 33 AIGPESLAFDALGEGPYTGVSD-GRIIKWHQD--QRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGD 109 (359)
Q Consensus 33 ~~~p~~i~~~~~G~~l~~~~~~-~~i~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~ 109 (359)
...|.+++++++|+.+|++..+ +.|..|+.+ +++.+... .+.. ...|.++++++++..
T Consensus 37 ~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~------------------~~~~-~~~~~~~~~s~dg~~ 97 (343)
T 1ri6_A 37 PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAA------------------ESAL-PGSLTHISTDHQGQF 97 (343)
T ss_dssp SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE------------------EEEC-SSCCSEEEECTTSSE
T ss_pred CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecc------------------cccc-CCCCcEEEEcCCCCE
Confidence 3589999999999978877765 899998876 55444332 1111 236789999995556
Q ss_pred EEEEeCCC-cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeC
Q 018242 110 LYIADAYF-GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDP 188 (359)
Q Consensus 110 l~v~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 188 (359)
+|++.... .|..++.+.+.......... ....++.++++|+|+++|+++.. .+.|..|+.
T Consensus 98 l~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~-----------------~~~v~~~d~ 158 (343)
T 1ri6_A 98 VFVGSYNAGNVSVTRLEDGLPVGVVDVVE--GLDGCHSANISPDNRTLWVPALK-----------------QDRICLFTV 158 (343)
T ss_dssp EEEEETTTTEEEEEEEETTEEEEEEEEEC--CCTTBCCCEECTTSSEEEEEEGG-----------------GTEEEEEEE
T ss_pred EEEEecCCCeEEEEECCCCcccccccccc--CCCCceEEEECCCCCEEEEecCC-----------------CCEEEEEEe
Confidence 88887644 47788774332221111111 12357889999999988888422 356888887
Q ss_pred CC-CcEEEE------eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC--CCcceeEeecCCC------CCCceEE
Q 018242 189 AT-KQVTVL------LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS--KAGTIEIVAQLPG------FPDNIKR 253 (359)
Q Consensus 189 ~~-~~~~~~------~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~------~p~~i~~ 253 (359)
.+ +++... ......|.+++++|+++.+|++...++.|..|+++.. ...........+. .+.++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 238 (343)
T 1ri6_A 159 SDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHI 238 (343)
T ss_dssp CTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEE
T ss_pred cCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEE
Confidence 65 554321 1233568899999999999999988899999998542 1211222222211 2335999
Q ss_pred CCCCC-EEEEEecCC
Q 018242 254 SPRGG-FWVGIHSRR 267 (359)
Q Consensus 254 d~~G~-lwv~~~~~~ 267 (359)
+++|+ ||++....+
T Consensus 239 s~dg~~l~v~~~~~~ 253 (343)
T 1ri6_A 239 TPDGRHLYACDRTAS 253 (343)
T ss_dssp CTTSSEEEEEETTTT
T ss_pred CCCCCEEEEEecCCC
Confidence 99996 666664444
No 61
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.61 E-value=3.9e-13 Score=119.52 Aligned_cols=184 Identities=13% Similarity=0.182 Sum_probs=125.7
Q ss_pred CCCCceEEEccCCCeeEEec-CCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEE
Q 018242 33 AIGPESLAFDALGEGPYTGV-SDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLY 111 (359)
Q Consensus 33 ~~~p~~i~~~~~G~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~ 111 (359)
...|.+++++++|+ +|++. .+++|.+||+.+++++.+... ........|..+++++ +|++|
T Consensus 68 ~~~~~~l~~~~dg~-l~v~~~~~~~i~~~d~~~g~~~~~~~~----------------~~~~~~~~~~~i~~d~-~G~l~ 129 (296)
T 3e5z_A 68 SHHQNGHCLNKQGH-LIACSHGLRRLERQREPGGEWESIADS----------------FEGKKLNSPNDVCLAP-DGSLW 129 (296)
T ss_dssp CSSEEEEEECTTCC-EEEEETTTTEEEEECSTTCCEEEEECE----------------ETTEECCCCCCEEECT-TSCEE
T ss_pred CCCcceeeECCCCc-EEEEecCCCeEEEEcCCCCcEEEEeec----------------cCCCCCCCCCCEEECC-CCCEE
Confidence 46789999999999 56555 458999999977766654311 0011224577899999 89999
Q ss_pred EEeC------------------CCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceee
Q 018242 112 IADA------------------YFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISV 173 (359)
Q Consensus 112 v~~~------------------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~ 173 (359)
+++. ..+|++++++ ++++.+.. ....|++++++++|+ +++++..
T Consensus 130 vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-----~~~~~~gi~~s~dg~-~lv~~~~----------- 191 (296)
T 3e5z_A 130 FSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR-----DRVKPNGLAFLPSGN-LLVSDTG----------- 191 (296)
T ss_dssp EEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC-----CCSSEEEEEECTTSC-EEEEETT-----------
T ss_pred EECCccccccccccccccccCCCcEEEEECCC-CCEEEeec-----CCCCCccEEECCCCC-EEEEeCC-----------
Confidence 9753 2369999988 55554432 234688999999999 5577543
Q ss_pred eeecCCCceEEEEeCC-CCcE---E-EEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCC
Q 018242 174 ILSGDKTGRLMKYDPA-TKQV---T-VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFP 248 (359)
Q Consensus 174 ~~~~~~~g~v~~~d~~-~~~~---~-~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p 248 (359)
.+.|++++.+ ++++ . .+......|.+++++++|+ +|++. .++|.+|+.++. ....+....+ |
T Consensus 192 ------~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~g~---~~~~~~~~~~-~ 258 (296)
T 3e5z_A 192 ------DNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--GDGVHVLTPDGD---ELGRVLTPQT-T 258 (296)
T ss_dssp ------TTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--TTEEEEECTTSC---EEEEEECSSC-C
T ss_pred ------CCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--CCeEEEECCCCC---EEEEEECCCC-c
Confidence 3578888865 4554 2 2222345689999999997 78887 689999986532 1222222233 8
Q ss_pred CceEE-CCCCC-EEEEEec
Q 018242 249 DNIKR-SPRGG-FWVGIHS 265 (359)
Q Consensus 249 ~~i~~-d~~G~-lwv~~~~ 265 (359)
.++++ .++|+ ||+++..
T Consensus 259 ~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 259 SNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp CEEEEESTTSCEEEEEETT
T ss_pred eeEEEECCCCCEEEEEcCC
Confidence 88998 46764 9998853
No 62
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.60 E-value=2.5e-13 Score=120.53 Aligned_cols=203 Identities=11% Similarity=0.093 Sum_probs=130.3
Q ss_pred EEEeeCCCCCCceEEEccCCCeeEEec-CCCEEEEEEcCCcceEEEeecCCCCCCCCCCccccccccc---ccCCcceEE
Q 018242 26 VQYQIEGAIGPESLAFDALGEGPYTGV-SDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKE---HICGRPLGL 101 (359)
Q Consensus 26 ~~~~~~~~~~p~~i~~~~~G~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~gi 101 (359)
..++.+ .-.||++.+|++..++|++. ..++|.++++.++....+..+ ... .....+.||
T Consensus 6 i~~~~~-~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~----------------~~s~~g~~~~~~sGl 68 (334)
T 2p9w_A 6 IDVKVK-NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVID----------------GASSNGDGEQQMSGL 68 (334)
T ss_dssp EEECCT-TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCT----------------TTCCSSCCSEEEEEE
T ss_pred EEecCc-ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecC----------------CccccCCCcceeeEE
Confidence 344544 47899999998554577665 679999999986644433110 000 011235799
Q ss_pred EE---ecCCCeEEEE-eC-------------CCcEEEEeCC---CCeEEEEeecC--C-------CccccccceEEEeCC
Q 018242 102 CF---NKTNGDLYIA-DA-------------YFGLLKVGPE---GGLATAVATQS--E-------GIPFRFCNSLDIDQS 152 (359)
Q Consensus 102 ~~---~~~~g~l~v~-~~-------------~~~i~~~~~~---~~~~~~~~~~~--~-------~~~~~~~~~l~~d~~ 152 (359)
.+ |+ +++||++ +. ...|.++|++ +++........ . +.....++++++|++
T Consensus 69 ~~~~~D~-~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~ 147 (334)
T 2p9w_A 69 SLLTHDN-SKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRD 147 (334)
T ss_dssp EESSSSS-CCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTT
T ss_pred EEeccCC-CCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCC
Confidence 99 68 6999995 41 2359999998 56543333210 0 112246899999999
Q ss_pred CCEEEEEeCCCccccccceeeeeecCCC-ceEEEEeCCCCcEEEEe------CCCCCCceEEEccCCCEEEEEecCCCEE
Q 018242 153 TGIIYFTDSSSQFQRRNHISVILSGDKT-GRLMKYDPATKQVTVLL------GNLSFPNGVALSEDGNYILLAETTSCRI 225 (359)
Q Consensus 153 g~~l~v~d~~~~~~~~~~~~~~~~~~~~-g~v~~~d~~~~~~~~~~------~~~~~p~gia~~~d~~~l~v~~~~~~~i 225 (359)
|+ +||+++. . +.|+++++++....... .....++||++.||++.|++.++ .++|
T Consensus 148 Gn-aYVt~s~-----------------~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L 208 (334)
T 2p9w_A 148 GN-SYVAFAL-----------------GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRAL 208 (334)
T ss_dssp SC-EEEEEEE-----------------SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSE
T ss_pred CC-EEEeCCC-----------------CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeE
Confidence 99 9998643 3 57999999865444322 11235789999999999999998 8999
Q ss_pred EEEEcCCCCCcceeEe--e--cCCCCCCce-EECCCCCE-EEEEec
Q 018242 226 LRYWLKTSKAGTIEIV--A--QLPGFPDNI-KRSPRGGF-WVGIHS 265 (359)
Q Consensus 226 ~~~~~~~~~~~~~~~~--~--~~~~~p~~i-~~d~~G~l-wv~~~~ 265 (359)
++||+..........- . .....|++| ....+|++ +|+...
T Consensus 209 ~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~ 254 (334)
T 2p9w_A 209 TAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARA 254 (334)
T ss_dssp EEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEET
T ss_pred EEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCC
Confidence 9999873211011110 0 011236775 55668876 666654
No 63
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.60 E-value=1.3e-12 Score=119.42 Aligned_cols=199 Identities=12% Similarity=0.136 Sum_probs=123.5
Q ss_pred CCCCCceEEEccCCCeeEEecCC----CEEEEEE--cCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEec
Q 018242 32 GAIGPESLAFDALGEGPYTGVSD----GRIIKWH--QDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNK 105 (359)
Q Consensus 32 ~~~~p~~i~~~~~G~~l~~~~~~----~~i~~~d--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~ 105 (359)
....|..++++|+|+.+|++..+ +.|..|+ .++++.+.+. ........|.++++
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~------------------~~~~~~~~p~~~~~-- 107 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN------------------TQKTMGADPCYLTT-- 107 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEE------------------EEECSSSCEEEEEE--
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEee------------------EeccCCCCcEEEEE--
Confidence 45789999999999988887764 6776555 4445444432 11222345778888
Q ss_pred CCCeEEEEeCCC-cEEEEeCCC-CeEEEEe---e-cCC-----CccccccceEEEeCCCCEEEEEeCCCccccccceeee
Q 018242 106 TNGDLYIADAYF-GLLKVGPEG-GLATAVA---T-QSE-----GIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVI 174 (359)
Q Consensus 106 ~~g~l~v~~~~~-~i~~~~~~~-~~~~~~~---~-~~~-----~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~ 174 (359)
+++.||+++... .+..++.+. +.+..+. . ... ......++.++++|+|+++|+++.+..
T Consensus 108 dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~---------- 177 (361)
T 3scy_A 108 NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTD---------- 177 (361)
T ss_dssp CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTT----------
T ss_pred CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCC----------
Confidence 377899987654 477777653 2221110 1 000 011234578999999998999865311
Q ss_pred eecCCCceEEEEeCCCC----c-E-------EEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEee
Q 018242 175 LSGDKTGRLMKYDPATK----Q-V-------TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA 242 (359)
Q Consensus 175 ~~~~~~g~v~~~d~~~~----~-~-------~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~ 242 (359)
.-.++.++..++ + + .........|.+++|+|||+.+|+++..++.|.+|+++.........+.
T Consensus 178 -----~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~ 252 (361)
T 3scy_A 178 -----QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVA 252 (361)
T ss_dssp -----EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEE
T ss_pred -----EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEe
Confidence 113444455443 2 2 1122345668899999999999999988899999998743222222222
Q ss_pred cCC---CCCCceEECCCCC-EEEEEec
Q 018242 243 QLP---GFPDNIKRSPRGG-FWVGIHS 265 (359)
Q Consensus 243 ~~~---~~p~~i~~d~~G~-lwv~~~~ 265 (359)
..+ ..|.+++++++|+ ||++...
T Consensus 253 ~~~~~~~~~~~i~~spdg~~l~v~~~~ 279 (361)
T 3scy_A 253 ADTVNAQGSGDIHLSPDGKYLYASNRL 279 (361)
T ss_dssp SCSSCCCCEEEEEECTTSSEEEEEECS
T ss_pred cCCCCCCCcccEEECCCCCEEEEECCC
Confidence 211 2355899999997 6676655
No 64
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.60 E-value=7.2e-13 Score=121.63 Aligned_cols=198 Identities=14% Similarity=0.128 Sum_probs=122.8
Q ss_pred CCCCCCceEEEccCCCeeEEecCCCEEEEEEcC-CcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCe
Q 018242 31 EGAIGPESLAFDALGEGPYTGVSDGRIIKWHQD-QRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGD 109 (359)
Q Consensus 31 ~~~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~ 109 (359)
+....|..++++|+|+++|++..+ .|..|+.+ +++..... .. ...+.|.++++++ +|+
T Consensus 37 ~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~------------------~~-~~~g~~~~~~~sp-dg~ 95 (365)
T 1jof_A 37 PQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEA------------------SH-PIGGHPRANDADT-NTR 95 (365)
T ss_dssp CTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEE------------------EE-ECCSSGGGGCTTS-CCE
T ss_pred CCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEee------------------Ee-ecCCCCccEEECC-CCC
Confidence 345689999999999988887776 89999875 55443221 10 0112366678888 565
Q ss_pred -EEE--Ee-------------CCCcEEEEeCC-CCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCcccccccee
Q 018242 110 -LYI--AD-------------AYFGLLKVGPE-GGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHIS 172 (359)
Q Consensus 110 -l~v--~~-------------~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~ 172 (359)
+|+ ++ ..+.+..++.+ .++...............+++++++|+|+++|+++.+
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~---------- 165 (365)
T 1jof_A 96 AIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT---------- 165 (365)
T ss_dssp EEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT----------
T ss_pred EEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCC----------
Confidence 343 32 23335566654 2443221111100122468899999999988888653
Q ss_pred eeeecCCCceEEEEeCC-CCcEEEE---e-C-CCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC--CCcc-eeEeec
Q 018242 173 VILSGDKTGRLMKYDPA-TKQVTVL---L-G-NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS--KAGT-IEIVAQ 243 (359)
Q Consensus 173 ~~~~~~~~g~v~~~d~~-~~~~~~~---~-~-~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~--~~~~-~~~~~~ 243 (359)
...|+.|+.+ ++++..+ . . ....|.+++|+|||+++|+++..++.|.+|+++.. +... .+.+..
T Consensus 166 -------~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~ 238 (365)
T 1jof_A 166 -------ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPL 238 (365)
T ss_dssp -------TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEES
T ss_pred -------CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEc
Confidence 2367777776 5665432 1 1 24568999999999999999888889999887532 1110 112222
Q ss_pred CC----C---------CCCceE-ECCCCC-EEEEEecC
Q 018242 244 LP----G---------FPDNIK-RSPRGG-FWVGIHSR 266 (359)
Q Consensus 244 ~~----~---------~p~~i~-~d~~G~-lwv~~~~~ 266 (359)
++ + .|.+++ ++++|+ ||++..+.
T Consensus 239 ~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 239 IPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp SCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred CCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 22 1 366789 999997 77776543
No 65
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.58 E-value=1.2e-13 Score=123.24 Aligned_cols=188 Identities=15% Similarity=0.161 Sum_probs=130.6
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
..|.+++++++|+ +|++. ..+|+++|+++++++.+.... .......+..+++++ +|++|++
T Consensus 54 ~~~~~i~~~~dG~-l~v~~-~~~l~~~d~~~g~~~~~~~~~----------------~~~~~~~~~di~~d~-dG~l~~~ 114 (297)
T 3g4e_A 54 APVSSVALRQSGG-YVATI-GTKFCALNWKEQSAVVLATVD----------------NDKKNNRFNDGKVDP-AGRYFAG 114 (297)
T ss_dssp SCEEEEEEBTTSS-EEEEE-TTEEEEEETTTTEEEEEEECC----------------TTCSSEEEEEEEECT-TSCEEEE
T ss_pred CceEEEEECCCCC-EEEEE-CCeEEEEECCCCcEEEEEecC----------------CCCCCCCCCCEEECC-CCCEEEe
Confidence 4788999999999 88877 468999999988776654211 001224578899999 8899998
Q ss_pred eCC------------CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCc
Q 018242 114 DAY------------FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTG 181 (359)
Q Consensus 114 ~~~------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g 181 (359)
+.. .+|+++++++ +...+.. ....|++++++++|+++|++++. .+
T Consensus 115 ~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~-----~~~~pngi~~spdg~~lyv~~~~-----------------~~ 171 (297)
T 3g4e_A 115 TMAEETAPAVLERHQGALYSLFPDH-HVKKYFD-----QVDISNGLDWSLDHKIFYYIDSL-----------------SY 171 (297)
T ss_dssp EEECCSBTTBCCTTCEEEEEECTTS-CEEEEEE-----EESBEEEEEECTTSCEEEEEEGG-----------------GT
T ss_pred cCCcccccccccCCCcEEEEEECCC-CEEEEee-----ccccccceEEcCCCCEEEEecCC-----------------CC
Confidence 732 2599999874 4433332 23468999999999889999643 34
Q ss_pred eEEEEeC--CCCcEE---EEe---CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCC-CCCCceE
Q 018242 182 RLMKYDP--ATKQVT---VLL---GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLP-GFPDNIK 252 (359)
Q Consensus 182 ~v~~~d~--~~~~~~---~~~---~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~p~~i~ 252 (359)
.|++++. .++.+. .+. .....|.+++++++|+ +|++...+++|.+|+.+.. +.......+ ..|.+++
T Consensus 172 ~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~tG---~~~~~i~~p~~~~t~~~ 247 (297)
T 3g4e_A 172 SVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVTG---KRLQTVKLPVDKTTSCC 247 (297)
T ss_dssp EEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTTC---CEEEEEECSSSBEEEEE
T ss_pred cEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCCc---eEEEEEECCCCCceEEE
Confidence 6777764 455442 121 1224689999999996 8999988899999986532 222222333 4578899
Q ss_pred EC-CCC-CEEEEEecCC
Q 018242 253 RS-PRG-GFWVGIHSRR 267 (359)
Q Consensus 253 ~d-~~G-~lwv~~~~~~ 267 (359)
+. +++ .|||++...+
T Consensus 248 f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 248 FGGKNYSEMYVTCARDG 264 (297)
T ss_dssp EESGGGCEEEEEEBCTT
T ss_pred EeCCCCCEEEEEcCCcC
Confidence 97 665 5999887543
No 66
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.58 E-value=1.5e-13 Score=122.86 Aligned_cols=189 Identities=16% Similarity=0.193 Sum_probs=129.4
Q ss_pred CCCceEEEccC-CCeeEEecCCCEEEEEEcCCcceEEE-eecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEE
Q 018242 34 IGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQRRWLHF-ARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLY 111 (359)
Q Consensus 34 ~~p~~i~~~~~-G~~l~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~ 111 (359)
..|.+++++++ |+ +|++...++|+++|++ +++..+ ... ........|.++++++ +|++|
T Consensus 71 ~~~~~i~~~~~~g~-l~v~~~~~~l~~~d~~-g~~~~~~~~~----------------~~~~~~~~~~~i~~d~-~g~l~ 131 (314)
T 1pjx_A 71 GIPAGCQCDRDANQ-LFVADMRLGLLVVQTD-GTFEEIAKKD----------------SEGRRMQGCNDCAFDY-EGNLW 131 (314)
T ss_dssp CCEEEEEECSSSSE-EEEEETTTEEEEEETT-SCEEECCSBC----------------TTSCBCBCCCEEEECT-TSCEE
T ss_pred CCCceEEEecCCCc-EEEEECCCCEEEEeCC-CCEEEEEecc----------------CCCccccCCcCEEECC-CCCEE
Confidence 57899999999 87 7777766699999998 655543 210 0001123478999999 89999
Q ss_pred EEeCC----------------CcEEEEeCCCCeEEEEeecCCCccccccceEEEe----CCCCEEEEEeCCCccccccce
Q 018242 112 IADAY----------------FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDID----QSTGIIYFTDSSSQFQRRNHI 171 (359)
Q Consensus 112 v~~~~----------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d----~~g~~l~v~d~~~~~~~~~~~ 171 (359)
+++.. .+|++++++ ++.+.+.. ....+++++++ ++|+++|+++..
T Consensus 132 v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-----~~~~~~~i~~~~~~d~dg~~l~v~~~~--------- 196 (314)
T 1pjx_A 132 ITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT-----AFQFPNGIAVRHMNDGRPYQLIVAETP--------- 196 (314)
T ss_dssp EEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE-----EESSEEEEEEEECTTSCEEEEEEEETT---------
T ss_pred EEecCcccccccccccccCCCCeEEEECCC-CCEEEecc-----CCCCcceEEEecccCCCCCEEEEEECC---------
Confidence 99864 369999987 55544432 22357889999 999669999643
Q ss_pred eeeeecCCCceEEEEeCC-CCcEE---EEe--C-CC-CCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec
Q 018242 172 SVILSGDKTGRLMKYDPA-TKQVT---VLL--G-NL-SFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ 243 (359)
Q Consensus 172 ~~~~~~~~~g~v~~~d~~-~~~~~---~~~--~-~~-~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~ 243 (359)
.+.|++++.+ ++++. .+. . .. ..|.+++++++|+ +|++...+++|.+|+.+..+. ...+..
T Consensus 197 --------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~g~~--~~~~~~ 265 (314)
T 1pjx_A 197 --------TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGGQP--KMRIRC 265 (314)
T ss_dssp --------TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCBSC--SEEEEC
T ss_pred --------CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCCCcE--eEEEeC
Confidence 3478888864 34322 111 1 11 4589999999986 899987888999998653221 122222
Q ss_pred CCCCCCceEECCCCC-EEEEEecCC
Q 018242 244 LPGFPDNIKRSPRGG-FWVGIHSRR 267 (359)
Q Consensus 244 ~~~~p~~i~~d~~G~-lwv~~~~~~ 267 (359)
....|.+++++++|+ ||+++...+
T Consensus 266 ~~~~~~~i~~~~dg~~l~v~~~~~~ 290 (314)
T 1pjx_A 266 PFEKPSNLHFKPQTKTIFVTEHENN 290 (314)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTTT
T ss_pred CCCCceeEEECCCCCEEEEEeCCCC
Confidence 224578899999998 999886543
No 67
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.58 E-value=1.5e-12 Score=118.17 Aligned_cols=207 Identities=13% Similarity=0.083 Sum_probs=129.7
Q ss_pred CCCCceEEEccCCCeeEEec-CCCEEEEEEcC-CcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeE
Q 018242 33 AIGPESLAFDALGEGPYTGV-SDGRIIKWHQD-QRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDL 110 (359)
Q Consensus 33 ~~~p~~i~~~~~G~~l~~~~-~~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l 110 (359)
...|.+++++++|+.+|++. .++.+..|+.+ ++....+...... + .+| ........++++++++ +|++
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~-~--~~p------~~~~~~~~~~~~~~sp-dg~l 154 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHS-G--HGP------RPEQDGSHIHYTDLTP-DNRL 154 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECC-C--CCS------STTCSSCCEEEEEECT-TSCE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecC-C--CCC------CccccCCCceEEEECC-CCcE
Confidence 46899999999999788776 56889999975 3333332211000 0 000 0001123467899999 6669
Q ss_pred EEEeCCC-cEEEEeCC-CCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeC
Q 018242 111 YIADAYF-GLLKVGPE-GGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDP 188 (359)
Q Consensus 111 ~v~~~~~-~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 188 (359)
|+++... .|..++.+ ++++...... .......|+.++++|+|+++|+++... ..-.++.++.
T Consensus 155 ~v~~~~~~~v~~~~~~~~g~~~~~~~~-~~~~g~~p~~~~~spdg~~l~v~~~~~---------------~~v~v~~~~~ 218 (347)
T 3hfq_A 155 AVIDLGSDKVYVYNVSDAGQLSEQSVL-TMEAGFGPRHLVFSPDGQYAFLAGELS---------------SQIASLKYDT 218 (347)
T ss_dssp EEEETTTTEEEEEEECTTSCEEEEEEE-ECCTTCCEEEEEECTTSSEEEEEETTT---------------TEEEEEEEET
T ss_pred EEEeCCCCEEEEEEECCCCcEEEeeeE-EcCCCCCCceEEECCCCCEEEEEeCCC---------------CEEEEEEecC
Confidence 9887654 48888876 5655433211 111223677899999999889885431 1123455555
Q ss_pred CCCcEEEEe---CC------CCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec---CCCCCCceEECCC
Q 018242 189 ATKQVTVLL---GN------LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ---LPGFPDNIKRSPR 256 (359)
Q Consensus 189 ~~~~~~~~~---~~------~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~p~~i~~d~~ 256 (359)
.++++.... .. ...|.+++++|||++||++...++.|.+|+++... ..+.... ....|.+++++++
T Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g--~~~~~~~~~~~~~~~~~~~~spd 296 (347)
T 3hfq_A 219 QTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG--HLTLIQQISTEGDFPRDFDLDPT 296 (347)
T ss_dssp TTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG--CEEEEEEEECSSSCCCEEEECTT
T ss_pred CCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC--cEEEeEEEecCCCCcCeEEECCC
Confidence 456554321 11 13477899999999999999888999999986331 2222222 2345899999999
Q ss_pred CC-EEEEEecCC
Q 018242 257 GG-FWVGIHSRR 267 (359)
Q Consensus 257 G~-lwv~~~~~~ 267 (359)
|+ ||++....+
T Consensus 297 g~~l~v~~~~~~ 308 (347)
T 3hfq_A 297 EAFVVVVNQNTD 308 (347)
T ss_dssp SSEEEEEETTTT
T ss_pred CCEEEEEEcCCC
Confidence 97 777776544
No 68
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.58 E-value=6.9e-13 Score=119.75 Aligned_cols=187 Identities=13% Similarity=0.193 Sum_probs=128.8
Q ss_pred CCCCceEEEccCCCeeEEecC-C----CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCC
Q 018242 33 AIGPESLAFDALGEGPYTGVS-D----GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTN 107 (359)
Q Consensus 33 ~~~p~~i~~~~~G~~l~~~~~-~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~ 107 (359)
...|.+++++++|+ +|++.. + ++|+++|++++....+. ........+.++++++ +
T Consensus 86 ~~~~~~i~~~~dg~-l~v~~~~~~~~~~~i~~~d~~~~~~~~~~------------------~~~~~~~~~~~i~~d~-~ 145 (333)
T 2dg1_A 86 KANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATENGDNLQDII------------------EDLSTAYCIDDMVFDS-K 145 (333)
T ss_dssp SSSEEEEEECTTSC-EEEEECTTSSSCCEEEEECTTSCSCEEEE------------------CSSSSCCCEEEEEECT-T
T ss_pred CCCcceEEECCCCc-EEEEeCCCCCCCceEEEEeCCCCEEEEEE------------------ccCccCCcccceEECC-C
Confidence 35789999999999 666554 3 58999999887554321 0011224578999999 8
Q ss_pred CeEEEEeCC-------CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCC
Q 018242 108 GDLYIADAY-------FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKT 180 (359)
Q Consensus 108 g~l~v~~~~-------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~ 180 (359)
|++|+++.. .+|+++++++++.+.+.. ....+++++++++|+++|+++.. .
T Consensus 146 g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~i~~~~dg~~l~v~~~~-----------------~ 203 (333)
T 2dg1_A 146 GGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ-----NISVANGIALSTDEKVLWVTETT-----------------A 203 (333)
T ss_dssp SCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE-----EESSEEEEEECTTSSEEEEEEGG-----------------G
T ss_pred CCEEEEeccccccCCCceEEEEeCCCCEEEEeec-----CCCcccceEECCCCCEEEEEeCC-----------------C
Confidence 899999763 469999998877655432 22357899999999879998532 3
Q ss_pred ceEEEEeCCC--CcEEEE----e---CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCC-----
Q 018242 181 GRLMKYDPAT--KQVTVL----L---GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPG----- 246 (359)
Q Consensus 181 g~v~~~d~~~--~~~~~~----~---~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~----- 246 (359)
+.|++++.++ .....+ . .....|.+++++++|+ +|++...+++|.+|+.++. ....+.....
T Consensus 204 ~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~g~---~~~~~~~~~~~~g~~ 279 (333)
T 2dg1_A 204 NRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDN-LYVAMYGQGRVLVFNKRGY---PIGQILIPGRDEGHM 279 (333)
T ss_dssp TEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCC-EEEEEETTTEEEEECTTSC---EEEEEECTTGGGTCS
T ss_pred CeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCC-EEEEEcCCCEEEEECCCCC---EEEEEEcCCCccccc
Confidence 4788888742 223211 1 1124688999999987 8888877889999986422 1222222111
Q ss_pred -CCCceEECCCC-CEEEEEec
Q 018242 247 -FPDNIKRSPRG-GFWVGIHS 265 (359)
Q Consensus 247 -~p~~i~~d~~G-~lwv~~~~ 265 (359)
.|.+++++++| .||+++..
T Consensus 280 ~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 280 LRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp CBCCEEEECTTSCEEEEEEEC
T ss_pred cCcceEEECCCCCEEEEEeCc
Confidence 58889999886 69998865
No 69
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.57 E-value=1.8e-12 Score=125.44 Aligned_cols=197 Identities=12% Similarity=0.052 Sum_probs=133.1
Q ss_pred EEEEeeCCCCCCceEEEccCCCeeEEecCCCEEEEEEc--CCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEE
Q 018242 25 VVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQ--DQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLC 102 (359)
Q Consensus 25 ~~~~~~~~~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 102 (359)
+.++..+. .|++++++|||+++|++..++.|..||. .+.+... .+. ....|.+++
T Consensus 172 ~~~i~~g~--~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~--------------------~i~-~g~~p~~va 228 (543)
T 1nir_A 172 VKVIDTGY--AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVA--------------------EIK-IGIEARSVE 228 (543)
T ss_dssp EEEEECST--TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEE--------------------EEE-CCSEEEEEE
T ss_pred EEEEecCc--ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEE--------------------EEe-cCCCcceEE
Confidence 33555443 4899999999999999998899999999 5543221 122 235689999
Q ss_pred Eec----CCCeEEEEeC-CCcEEEEeCCCCeEEEEeecC----CC---ccccccceEEEeCCCCEEEEEeCCCccccccc
Q 018242 103 FNK----TNGDLYIADA-YFGLLKVGPEGGLATAVATQS----EG---IPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNH 170 (359)
Q Consensus 103 ~~~----~~g~l~v~~~-~~~i~~~~~~~~~~~~~~~~~----~~---~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~ 170 (359)
+++ ++..+|+++. .+.|..+|..+++........ .. .+...+.+++++++++++|++..
T Consensus 229 ~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~--------- 299 (543)
T 1nir_A 229 SSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK--------- 299 (543)
T ss_dssp ECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET---------
T ss_pred eCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC---------
Confidence 999 8899999975 356888998887754332211 00 01225678999999886777643
Q ss_pred eeeeeecCCCceEEEEeCCCCcEEE--EeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCC
Q 018242 171 ISVILSGDKTGRLMKYDPATKQVTV--LLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFP 248 (359)
Q Consensus 171 ~~~~~~~~~~g~v~~~d~~~~~~~~--~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p 248 (359)
..+.|..+|..+.+... .......|.+++|+||++++|+++..++.|.+||....+. .........|
T Consensus 300 --------~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l---~~~i~~g~~p 368 (543)
T 1nir_A 300 --------ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL---SALVDVGKTP 368 (543)
T ss_dssp --------TTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE---EEEEECSSSB
T ss_pred --------CCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeE---EEeeccCCCC
Confidence 25689999987543211 1233467899999999999999998889999999765422 1111222223
Q ss_pred ---CceE-ECCC-CCEEEEEe
Q 018242 249 ---DNIK-RSPR-GGFWVGIH 264 (359)
Q Consensus 249 ---~~i~-~d~~-G~lwv~~~ 264 (359)
.+.. ++++ |.+|++..
T Consensus 369 h~g~g~~~~~p~~g~~~~s~~ 389 (543)
T 1nir_A 369 HPGRGANFVHPKYGPVWSTSH 389 (543)
T ss_dssp CCTTCEEEEETTTEEEEEEEB
T ss_pred CCCCCcccCCCCCccEEEecc
Confidence 2443 3666 67898765
No 70
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.56 E-value=1.7e-13 Score=138.01 Aligned_cols=203 Identities=15% Similarity=0.132 Sum_probs=123.7
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCc---ceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQR---RWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI 112 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v 112 (359)
-.++..|++|+ +|+++. ++++++++.++ .++.+.... + ...........|..|+ +|+||+
T Consensus 326 v~~i~~D~~g~-lWiGt~-~Gl~~~~~~~~~~~~~~~~~~~~--------~------~~~l~~~~v~~i~~d~-~g~lWi 388 (758)
T 3ott_A 326 FYSLFRDSKGF-YWFGGA-NGLIRFTDPAGERHDAIWYRMGD--------K------TYPLSHNRIRHIYEDK-EQQLWI 388 (758)
T ss_dssp EEEEEECTTCC-EEEEET-TEEEEESCTTSSCCCCEEECTTC--------S------SSCCSCSCEEEEEECT-TSCEEE
T ss_pred EEEEEEcCCCC-EEEeeC-CcceeecccccccceeEEeccCC--------c------CCCCCCCceEEEEECC-CCCEEE
Confidence 35788899999 999986 58999988753 233332000 0 0000112356788887 899999
Q ss_pred EeCCCcEEEEeCCCCeEEEEeecCC--CccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCC
Q 018242 113 ADAYFGLLKVGPEGGLATAVATQSE--GIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPAT 190 (359)
Q Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 190 (359)
++ .+||.++++++++++.+..... ..+...+..+..|++|+ ||++.. .++|+++++++
T Consensus 389 gt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigT~------------------~~Gl~~~~~~~ 448 (758)
T 3ott_A 389 AT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQ-LWISTC------------------LGGIFVVDKHK 448 (758)
T ss_dssp EE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSE-EEEEES------------------SSCEEEEEHHH
T ss_pred Ee-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCC-EEEEEC------------------CCceEEEcccc
Confidence 98 4599999999988876542111 11234567899999999 999942 34699998653
Q ss_pred ------CcEE---EEe--CCCC--CCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec--CC--CCCCceEE
Q 018242 191 ------KQVT---VLL--GNLS--FPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ--LP--GFPDNIKR 253 (359)
Q Consensus 191 ------~~~~---~~~--~~~~--~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~~--~~p~~i~~ 253 (359)
+.+. .+. .++. ....|..+++|+ +|+.....++|++++.+.. ....+.. +. ..+..+..
T Consensus 449 ~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWi~~~t~~Gl~~~d~~~~---~~~~~~~~~~~~~~~~~~i~~ 524 (758)
T 3ott_A 449 LMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGN-VWVLLYNNKGIDKINPRTR---EVTKLFADELTGEKSPNYLLC 524 (758)
T ss_dssp HHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSC-EEEEETTCSSEEEEETTTT---EEEEECTTTSCGGGCEEEEEE
T ss_pred ccccCCcceecccccccccccccceeeeEEEcCCCC-EEEEccCCCCcEEEeCCCC---ceEEecCCCcCCCcccceEEE
Confidence 1221 111 1122 235677777776 6763334468999996543 2333321 11 23456888
Q ss_pred CCCCCEEEEEecCCCccccccccCCccceeeec
Q 018242 254 SPRGGFWVGIHSRRKGISKLVLSFPWIGNVLIK 286 (359)
Q Consensus 254 d~~G~lwv~~~~~~~~~~~~~~~~~~~g~~~~~ 286 (359)
|++|+||+++.. + +.++++..+.+..
T Consensus 525 d~~g~lWigt~~-G------l~~~~~~~~~~~~ 550 (758)
T 3ott_A 525 DEDGLLWVGFHG-G------VMRINPKDESQQS 550 (758)
T ss_dssp CTTSCEEEEETT-E------EEEECC--CCCCB
T ss_pred CCCCCEEEEecC-c------eEEEecCCCceEE
Confidence 999999999853 3 5666654443333
No 71
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.55 E-value=4.6e-12 Score=114.43 Aligned_cols=174 Identities=11% Similarity=0.074 Sum_probs=115.5
Q ss_pred EEeeCCCCCCceEEEccCCCeeEEecC-CCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEec
Q 018242 27 QYQIEGAIGPESLAFDALGEGPYTGVS-DGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNK 105 (359)
Q Consensus 27 ~~~~~~~~~p~~i~~~~~G~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~ 105 (359)
++.+.++..|++|++.+||+ +|++.. .|+|+++++++++...+...+. ........+.||+++|
T Consensus 25 ~~va~gL~~P~~ia~~pdG~-llVter~~G~I~~v~~~~g~~~~v~~~~~--------------v~~~g~~GllGia~~P 89 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPGGD-LLVSSRDEATITRVDAKTGRKTELGEVPG--------------VSPSGEGGLLGIALSP 89 (347)
T ss_dssp EEEECCCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTT--------------CCCBTTBSEEEEEECT
T ss_pred EEeecCCCCceEEEEcCCCc-EEEEEecCCEEEEEECCCCcEeeecccCc--------------eeecCCCCceeeEecc
Confidence 44556699999999999999 777766 7999999887654443321100 1122335589999998
Q ss_pred C---CCeEEEEeC---CCcEEEEeCCCC--------eEEEEeecCCCccccccceEEEeCCCCEEEEEeCC--Ccccccc
Q 018242 106 T---NGDLYIADA---YFGLLKVGPEGG--------LATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSS--SQFQRRN 169 (359)
Q Consensus 106 ~---~g~l~v~~~---~~~i~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~--~~~~~~~ 169 (359)
+ ++.||++.. .+.|.|+..+.+ ..+.+....+....+....|++++||. |||+.-. ......+
T Consensus 90 df~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd 168 (347)
T 3das_A 90 DYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQD 168 (347)
T ss_dssp THHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTC
T ss_pred ccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccC
Confidence 4 689999732 346999977652 123333322222345677899999999 9999422 1100000
Q ss_pred ceeeeeecCCCceEEEEeCCCC--------cEEEEeCCCCCCceEEEccCCCEEEEEecCCC
Q 018242 170 HISVILSGDKTGRLMKYDPATK--------QVTVLLGNLSFPNGVALSEDGNYILLAETTSC 223 (359)
Q Consensus 170 ~~~~~~~~~~~g~v~~~d~~~~--------~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~ 223 (359)
.....|+|+++++++. ..+.+..+...|.|++++++|+ ||+++...+
T Consensus 169 ------~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~-L~~~d~g~~ 223 (347)
T 3das_A 169 ------RKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQR-LFASEFGQD 223 (347)
T ss_dssp ------TTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCC-EEEEECCSS
T ss_pred ------CCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCC-EEEEecCCC
Confidence 1134688999999854 2345566778899999999876 899997654
No 72
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.55 E-value=8.4e-13 Score=124.00 Aligned_cols=154 Identities=16% Similarity=0.133 Sum_probs=108.9
Q ss_pred CCcceEEEEecC--CCeEEEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCcccccccee
Q 018242 95 CGRPLGLCFNKT--NGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHIS 172 (359)
Q Consensus 95 ~~~p~gi~~~~~--~g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~ 172 (359)
...|.+|+++++ +++||+++..+.|.++++++++++.+.. ....|++|+++++|+ ||+++....
T Consensus 138 ~~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-----~~~~P~giavd~dG~-lyVad~~~~-------- 203 (433)
T 4hw6_A 138 FDNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-----NIGQCADVNFTLNGD-MVVVDDQSS-------- 203 (433)
T ss_dssp CSCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-----CCSCEEEEEECTTCC-EEEEECCSC--------
T ss_pred cCCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-----CCCCccEEEECCCCC-EEEEcCCCC--------
Confidence 356999999983 6999999876779999998888876643 345799999999999 999986421
Q ss_pred eeeecCCCceEEEEeCCCCcE-EEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-CCCCCCc
Q 018242 173 VILSGDKTGRLMKYDPATKQV-TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDN 250 (359)
Q Consensus 173 ~~~~~~~~g~v~~~d~~~~~~-~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~ 250 (359)
.....++.+++.++.. ......+..|+++++++++..|||++..+++|++++.+..... ...+.. ....+.+
T Consensus 204 -----~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~-~~~~~~~~~~~~~~ 277 (433)
T 4hw6_A 204 -----DTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLT-EEEVMMDTKGSNFH 277 (433)
T ss_dssp -----TTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEE-EEEEECSCCSSCEE
T ss_pred -----cccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEE-EEEeccCCCCCccc
Confidence 1122466666653322 1122346789999999944459999999999999987533210 112222 2233456
Q ss_pred eEECCCCC-EEEEEecCCC
Q 018242 251 IKRSPRGG-FWVGIHSRRK 268 (359)
Q Consensus 251 i~~d~~G~-lwv~~~~~~~ 268 (359)
|++|++|+ ||++....+.
T Consensus 278 ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 278 IVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp EEECTTSSEEEEEETTTTE
T ss_pred EEEeCCCCEEEEEeCCCCE
Confidence 99999998 9999987654
No 73
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.54 E-value=3.9e-12 Score=114.46 Aligned_cols=198 Identities=12% Similarity=0.056 Sum_probs=128.6
Q ss_pred EEccCCCeeE-EecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC-C
Q 018242 40 AFDALGEGPY-TGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY-F 117 (359)
Q Consensus 40 ~~~~~G~~l~-~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~-~ 117 (359)
.++.+++.+| ++..++.|..||..+++..... ......+ ++++++++..+|++... +
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~--------------------~~~~~~~-~~~~s~dg~~l~~~~~~~~ 62 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQI--------------------TLGYDFV-DTAITSDCSNVVVTSDFCQ 62 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEE--------------------ECCCCEE-EEEECSSSCEEEEEESTTC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeE--------------------EccCCcc-eEEEcCCCCEEEEEeCCCC
Confidence 3445555455 5566789999999887554321 1122345 89999955568888763 4
Q ss_pred cEEEEeCCCCeE-EEEeecCCCccccccce-EEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEE
Q 018242 118 GLLKVGPEGGLA-TAVATQSEGIPFRFCNS-LDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTV 195 (359)
Q Consensus 118 ~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~-l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 195 (359)
.|.++|.++++. ..... ....+.. ++++|+|+++|++... ...+.|..+|.++++...
T Consensus 63 ~i~~~d~~~~~~~~~~~~-----~~~~~~~~~~~s~dg~~l~~~~~~---------------~~~~~i~v~d~~~~~~~~ 122 (331)
T 3u4y_A 63 TLVQIETQLEPPKVVAIQ-----EGQSSMADVDITPDDQFAVTVTGL---------------NHPFNMQSYSFLKNKFIS 122 (331)
T ss_dssp EEEEEECSSSSCEEEEEE-----ECSSCCCCEEECTTSSEEEECCCS---------------SSSCEEEEEETTTTEEEE
T ss_pred eEEEEECCCCceeEEecc-----cCCCCccceEECCCCCEEEEecCC---------------CCcccEEEEECCCCCeEE
Confidence 699999988875 32222 1124556 9999999977733111 011279999998877665
Q ss_pred EeCCCCCCceEEEccCCCEEEEEecCCCE-EEEEEcCCCCC-ccee-EeecCCCCCCceEECCCCC-EEEEEecCCCccc
Q 018242 196 LLGNLSFPNGVALSEDGNYILLAETTSCR-ILRYWLKTSKA-GTIE-IVAQLPGFPDNIKRSPRGG-FWVGIHSRRKGIS 271 (359)
Q Consensus 196 ~~~~~~~p~gia~~~d~~~l~v~~~~~~~-i~~~~~~~~~~-~~~~-~~~~~~~~p~~i~~d~~G~-lwv~~~~~~~~~~ 271 (359)
.......|.+++++|||+.+|+++...+. |..|+++.... .... ........|.+++++++|+ +|++....+.
T Consensus 123 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~--- 199 (331)
T 3u4y_A 123 TIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNS--- 199 (331)
T ss_dssp EEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTE---
T ss_pred EEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCe---
Confidence 54445668999999999989999888777 99999874322 1111 1112334588899999997 8888765543
Q ss_pred cccccCCc-ccee
Q 018242 272 KLVLSFPW-IGNV 283 (359)
Q Consensus 272 ~~~~~~~~-~g~~ 283 (359)
+.+++. .++.
T Consensus 200 --v~v~d~~~~~~ 210 (331)
T 3u4y_A 200 --IGILETQNPEN 210 (331)
T ss_dssp --EEEEECSSTTS
T ss_pred --EEEEECCCCcc
Confidence 444443 4554
No 74
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.54 E-value=2e-13 Score=135.73 Aligned_cols=167 Identities=14% Similarity=0.117 Sum_probs=114.0
Q ss_pred CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC-CcEEEEeCCC----CeE
Q 018242 55 GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY-FGLLKVGPEG----GLA 129 (359)
Q Consensus 55 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~-~~i~~~~~~~----~~~ 129 (359)
+.|.++++++.+... +......|.+|++++.++.||+++.. +.|+++++++ ...
T Consensus 386 ~~I~~id~~~~~~~~---------------------~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~ 444 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTS---------------------LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY 444 (699)
T ss_dssp TC-CEECTTSCCEEC---------------------CSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCC
T ss_pred cceEEEeCCCCccee---------------------eeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcce
Confidence 568888887653321 12234568899999878999999765 4699999886 221
Q ss_pred EEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEe-CCCCCCceEEE
Q 018242 130 TAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLL-GNLSFPNGVAL 208 (359)
Q Consensus 130 ~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~p~gia~ 208 (359)
..+. ...+..|.+|++|+.++.||++|.. .+.|.++++++...+.+. ..+..|++|++
T Consensus 445 ~~~i----~~~~~~P~glavD~~~g~LY~tD~~-----------------~~~I~v~d~dg~~~~~l~~~~~~~P~giav 503 (699)
T 1n7d_A 445 DTVI----SRDIQAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFREQGSKPRAIVV 503 (699)
T ss_dssp CCBC----CSCC--CCCEECCCSSSBCEECCTT-----------------TSCEEEEBSSSCCEEEECCCSSCCCCCEEC
T ss_pred EEEE----eCCCCCcceEEEEeeCCcEEEEecc-----------------CCeEEEEecCCCceEEEEeCCCCCcceEEE
Confidence 1111 1123468899999544349999754 347999999866555544 34678999999
Q ss_pred ccCCCEEEEEecCC-CEEEEEEcCCCCCcceeEee-cCCCCCCceEECCC-CCEEEEEecC
Q 018242 209 SEDGNYILLAETTS-CRILRYWLKTSKAGTIEIVA-QLPGFPDNIKRSPR-GGFWVGIHSR 266 (359)
Q Consensus 209 ~~d~~~l~v~~~~~-~~i~~~~~~~~~~~~~~~~~-~~~~~p~~i~~d~~-G~lwv~~~~~ 266 (359)
+|+++.|||++... ++|+++++++.. .+.+. ..-..|++|++|++ ++||++....
T Consensus 504 Dp~~g~ly~td~~~~~~I~~~~~dG~~---~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~ 561 (699)
T 1n7d_A 504 DPVHGFMYWTDWGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSKL 561 (699)
T ss_dssp CSSSSCCEECCCSSSCCEEBCCSSSCC---CCEESCSSCSSCCCEEECTTTCCEEEEETTT
T ss_pred ccCCCcEEEcccCCCCeEEEEeCCCCC---eeEEEeCCCCCccEEEEeccCCEEEEEecCC
Confidence 99877899999765 789999876532 22222 22246999999975 6899998654
No 75
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.54 E-value=9.7e-12 Score=120.28 Aligned_cols=201 Identities=9% Similarity=-0.036 Sum_probs=140.1
Q ss_pred EEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCCCcE
Q 018242 40 AFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYFGL 119 (359)
Q Consensus 40 ~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~~~i 119 (359)
+++++|+++.+...++.|..||..+++... .+. ....++++++++++..||+++..+.|
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~--------------------~i~-~g~~~~~v~~spdg~~l~v~~~d~~V 202 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVK--------------------VID-TGYAVHISRMSASGRYLLVIGRDARI 202 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEE--------------------EEE-CSTTEEEEEECTTSCEEEEEETTSEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEE--------------------EEe-cCcccceEEECCCCCEEEEECCCCeE
Confidence 478888855566677899999998875432 111 12238899999977789999877779
Q ss_pred EEEeC--CCCeEEEEeecCCCccccccceEEEeC----CCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcE
Q 018242 120 LKVGP--EGGLATAVATQSEGIPFRFCNSLDIDQ----STGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQV 193 (359)
Q Consensus 120 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~d~----~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 193 (359)
..+|. .+++...... ....|.+++++| +|+++|+++. ..+.|..+|..+++.
T Consensus 203 ~v~D~~~~t~~~~~~i~-----~g~~p~~va~sp~~~~dg~~l~v~~~-----------------~~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 203 DMIDLWAKEPTKVAEIK-----IGIEARSVESSKFKGYEDRYTIAGAY-----------------WPPQFAIMDGETLEP 260 (543)
T ss_dssp EEEETTSSSCEEEEEEE-----CCSEEEEEEECCSTTCTTTEEEEEEE-----------------ESSEEEEEETTTCCE
T ss_pred EEEECcCCCCcEEEEEe-----cCCCcceEEeCCCcCCCCCEEEEEEc-----------------cCCeEEEEecccccc
Confidence 99999 6665432222 123678999999 9998999842 135688889887765
Q ss_pred EEEeCC------------CCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCC-EE
Q 018242 194 TVLLGN------------LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FW 260 (359)
Q Consensus 194 ~~~~~~------------~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lw 260 (359)
...... ...+.+++++++++.+|++...++.|+.++....+......+ .....|.++++|++|+ ++
T Consensus 261 ~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~ 339 (543)
T 1nir_A 261 KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFM 339 (543)
T ss_dssp EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEE
T ss_pred ceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEE
Confidence 543221 124568999999999999999999999999865432221122 2345689999999998 66
Q ss_pred EEEecCCCccccccccCC-ccceeeecCCc
Q 018242 261 VGIHSRRKGISKLVLSFP-WIGNVLIKLPI 289 (359)
Q Consensus 261 v~~~~~~~~~~~~~~~~~-~~g~~~~~~~~ 289 (359)
++....+. +.+++ .+++++..++.
T Consensus 340 va~~~~~~-----v~v~D~~tg~l~~~i~~ 364 (543)
T 1nir_A 340 TAANNSNK-----VAVIDSKDRRLSALVDV 364 (543)
T ss_dssp EEEGGGTE-----EEEEETTTTEEEEEEEC
T ss_pred EEecCCCe-----EEEEECCCCeEEEeecc
Confidence 66665554 44444 57888777654
No 76
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.53 E-value=3.7e-12 Score=114.56 Aligned_cols=206 Identities=13% Similarity=0.051 Sum_probs=128.4
Q ss_pred CCeEEEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEE
Q 018242 107 NGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKY 186 (359)
Q Consensus 107 ~g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 186 (359)
++.+|+++..++|++++++ ++....... . ......++++++|+ +|++. ..++|+++
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~-~---~~~~~~~~~~~~g~-l~vgt------------------~~~~l~~~ 162 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKT-K---KAIYATPIVSEDGT-IYVGS------------------NDNYLYAI 162 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEEC-S---SCCCSCCEECTTSC-EEEEC------------------TTSEEEEE
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcC-C---CceeeeeEEcCCCE-EEEEc------------------CCCEEEEE
Confidence 8899999877789999998 554322221 1 12345678899999 99983 23589999
Q ss_pred eCCCCcEEE-EeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-CCCCCCceEECCCCCEEEEEe
Q 018242 187 DPATKQVTV-LLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGGFWVGIH 264 (359)
Q Consensus 187 d~~~~~~~~-~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwv~~~ 264 (359)
|++ ++... ..........++++++++ +|++. +.|++++. .. ....... .......+++|++|+||+++.
T Consensus 163 d~~-g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t---~~l~~~d~-~g---~~~~~~~~~~~~~~~~~~~~~g~l~v~t~ 233 (330)
T 3hxj_A 163 NPD-GTEKWRFKTNDAITSAASIGKDGT-IYFGS---DKVYAINP-DG---TEKWNFYAGYWTVTRPAISEDGTIYVTSL 233 (330)
T ss_dssp CTT-SCEEEEEECSSCCCSCCEECTTCC-EEEES---SSEEEECT-TS---CEEEEECCSSCCCSCCEECTTSCEEEEET
T ss_pred CCC-CCEeEEEecCCCceeeeEEcCCCE-EEEEe---CEEEEECC-CC---cEEEEEccCCcceeceEECCCCeEEEEcC
Confidence 998 55543 222233445677777776 77765 78999982 21 1111111 223466789999999999987
Q ss_pred cCCCccccccccCCccceeeecCCccceeeeeeccc-------ccCcceEEEEECCCCCEEEEEEccCCceeeceEEEEE
Q 018242 265 SRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVK-------LSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEE 337 (359)
Q Consensus 265 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~ 337 (359)
.++ +..++++++.+..++.+.......+.. +... +.+.++|++|+.+..+.... ..+..+..
T Consensus 234 ~~g------l~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~-ggl~~~d~~g~~~~~~~~~~----~~~~~~~~ 302 (330)
T 3hxj_A 234 DGH------LYAINPDGTEKWRFKTGKRIESSPVIGNTDTIYFGSYD-GHLYAINPDGTEKWNFETGS----WIIATPVI 302 (330)
T ss_dssp TTE------EEEECTTSCEEEEEECSSCCCSCCEECTTSCEEEECTT-CEEEEECTTSCEEEEEECSS----CCCSCCEE
T ss_pred CCe------EEEECCCCCEeEEeeCCCCccccceEcCCCeEEEecCC-CCEEEECCCCcEEEEEEcCC----ccccceEE
Confidence 554 666677777766544332211212211 1222 47889998888877765422 22333444
Q ss_pred -eCCEEEEecCCCCeEEEEcC
Q 018242 338 -KDGNLWIGSVNMPYAGLYNY 357 (359)
Q Consensus 338 -~~g~l~ig~~~~~~l~~~~~ 357 (359)
.+|+||+|+. +..+.+.+.
T Consensus 303 d~~g~l~~gt~-~G~~~~~~~ 322 (330)
T 3hxj_A 303 DENGTIYFGTR-NGKFYALFN 322 (330)
T ss_dssp CTTCCEEEECT-TSCEEEEEC
T ss_pred cCCCEEEEEcC-CCeEEEEec
Confidence 5899999996 555655543
No 77
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.52 E-value=6.3e-13 Score=124.80 Aligned_cols=153 Identities=12% Similarity=0.148 Sum_probs=111.8
Q ss_pred CCcceEEEEec-CCCeEEEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceee
Q 018242 95 CGRPLGLCFNK-TNGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISV 173 (359)
Q Consensus 95 ~~~p~gi~~~~-~~g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~ 173 (359)
...|.+|++++ ++++||+++..+.|.+++++++.++.+.. ....|.+|+++++|++||+++....
T Consensus 136 ~~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-----~~~~P~~ia~d~~G~~lyvad~~~~--------- 201 (430)
T 3tc9_A 136 FGGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-----GLSKVRTICWTHEADSMIITNDQNN--------- 201 (430)
T ss_dssp CSCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-----CCSCEEEEEECTTSSEEEEEECCSC---------
T ss_pred CCCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-----CCCCcceEEEeCCCCEEEEEeCCCC---------
Confidence 35799999997 47999999876679999999988776543 3457899999999999999986421
Q ss_pred eeecCCCceEEEEeCCCCcE-EEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecC--CCCCCc
Q 018242 174 ILSGDKTGRLMKYDPATKQV-TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL--PGFPDN 250 (359)
Q Consensus 174 ~~~~~~~g~v~~~d~~~~~~-~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~p~~ 250 (359)
.....++.+++++... .........|.+++++|++..||+++..+++|++|+.++.. ...+... ...|.+
T Consensus 202 ----~~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~---~~~~~~~~~~~~P~g 274 (430)
T 3tc9_A 202 ----NDRPNNYILTRESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE---TTPLFTIQDSGWEFH 274 (430)
T ss_dssp ----TTSEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE---EEEEEECSSSSCCEE
T ss_pred ----cccceEEEEeCCCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc---EEEEEEcCCCCccee
Confidence 1122466677654322 01223467899999999545599999999999999976432 2122222 246999
Q ss_pred eEECCCCC-EEEEEecCCC
Q 018242 251 IKRSPRGG-FWVGIHSRRK 268 (359)
Q Consensus 251 i~~d~~G~-lwv~~~~~~~ 268 (359)
|++|++|+ ||++....+.
T Consensus 275 ia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 275 IQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp EEECTTSSEEEEEETTTTE
T ss_pred EEEcCCCCEEEEEECCCCE
Confidence 99999998 9999877654
No 78
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.52 E-value=1.2e-11 Score=115.55 Aligned_cols=274 Identities=15% Similarity=0.139 Sum_probs=168.0
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
..|.++++++++++++++..++.|..||..+++....... + ..........++++++ ++++|++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-----------~----~~~~~~~~v~~~~~~~-~~~~~~s 186 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPP-----------E----KYKKKLGFVETISIPE-HNELWVS 186 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCC-----------H----HHHTTCCEEEEEEEGG-GTEEEEE
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCc-----------c----cccccCCceeEEEEcC-CCEEEEE
Confidence 4678999999777455556667899999988754432100 0 1112223466788877 8888887
Q ss_pred eCC-CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCc
Q 018242 114 DAY-FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQ 192 (359)
Q Consensus 114 ~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 192 (359)
... +.|..+|.++++....... ....+..++++++|+++|++.. ..+.|..+|..+++
T Consensus 187 ~~~d~~v~~~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~-----------------~~~~i~~~d~~~~~ 245 (433)
T 3bws_A 187 QMQANAVHVFDLKTLAYKATVDL----TGKWSKILLYDPIRDLVYCSNW-----------------ISEDISVIDRKTKL 245 (433)
T ss_dssp EGGGTEEEEEETTTCCEEEEEEC----SSSSEEEEEEETTTTEEEEEET-----------------TTTEEEEEETTTTE
T ss_pred ECCCCEEEEEECCCceEEEEEcC----CCCCeeEEEEcCCCCEEEEEec-----------------CCCcEEEEECCCCc
Confidence 654 4588999988765432221 1236788999999997777742 24679999998777
Q ss_pred EEEEeCCCCCCceEEEccCCCEEEEEec-------CCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCC-EEEEEe
Q 018242 193 VTVLLGNLSFPNGVALSEDGNYILLAET-------TSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIH 264 (359)
Q Consensus 193 ~~~~~~~~~~p~gia~~~d~~~l~v~~~-------~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~ 264 (359)
..........+.+++++|+++.++++.. .++.|+.|++...+. ......++.+.+++++++|+ +|++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~g~~l~~~~~ 322 (433)
T 3bws_A 246 EIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL---IDTIGPPGNKRHIVSGNTENKIYVSDM 322 (433)
T ss_dssp EEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE---EEEEEEEECEEEEEECSSTTEEEEEET
T ss_pred EEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE---EeeccCCCCcceEEECCCCCEEEEEec
Confidence 6554444455889999999998888875 457899999865421 11111233467899999995 777765
Q ss_pred cCCCccccccccCCc-cceeeecCCccceeeeeecccccCcc----------------------eEEEEECCC-CCEEEE
Q 018242 265 SRRKGISKLVLSFPW-IGNVLIKLPIDIVKIHSSLVKLSGNG----------------------GMAMRISEQ-GNVLEI 320 (359)
Q Consensus 265 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~-g~~~~~ 320 (359)
..+. +..++. .++....++.. ..+..+++..+... +.+..+|.+ ++.+..
T Consensus 323 ~~~~-----v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 323 CCSK-----IEVYDLKEKKVQKSIPVF-DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp TTTE-----EEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred CCCE-----EEEEECCCCcEEEEecCC-CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 5554 555543 56665555432 22333333322220 123333322 222222
Q ss_pred EEccCCceeeceEEEEEe--CCEEEEecCCCCeEEEEcCC
Q 018242 321 LEEIGRKMWRSISEVEEK--DGNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 321 ~~~~~g~~~~~~~~~~~~--~g~l~ig~~~~~~l~~~~~~ 358 (359)
+.. + ..+..+... +..|++++..+..|.+++++
T Consensus 397 ~~~--~---~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 397 WEA--G---NQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEC--S---SSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred ecC--C---CCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 221 1 133444443 44677787778889998875
No 79
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.51 E-value=2.3e-12 Score=115.30 Aligned_cols=189 Identities=12% Similarity=0.167 Sum_probs=126.4
Q ss_pred CCCCceEEEccCCCeeEEec-CCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEE
Q 018242 33 AIGPESLAFDALGEGPYTGV-SDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLY 111 (359)
Q Consensus 33 ~~~p~~i~~~~~G~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~ 111 (359)
...|.+++++++|+ +|++. ..++|++++++ ++++.+... ........|..+++++ +|++|
T Consensus 85 ~~~~~gl~~d~dG~-l~v~~~~~~~v~~~~~~-g~~~~~~~~----------------~~~~~~~~~~~i~~d~-dG~l~ 145 (305)
T 3dr2_A 85 TAFTNGNAVDAQQR-LVHCEHGRRAITRSDAD-GQAHLLVGR----------------YAGKRLNSPNDLIVAR-DGAIW 145 (305)
T ss_dssp CSCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEECE----------------ETTEECSCCCCEEECT-TSCEE
T ss_pred CCccceeeECCCCC-EEEEECCCCEEEEECCC-CCEEEEEec----------------cCCCccCCCCCEEECC-CCCEE
Confidence 35789999999999 66665 45799999987 455554311 0011224577899999 89999
Q ss_pred EEeC------------------CCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceee
Q 018242 112 IADA------------------YFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISV 173 (359)
Q Consensus 112 v~~~------------------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~ 173 (359)
+++. ..+|+++++++++++.+. ....|++++++++|+.||+++....
T Consensus 146 ~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~------~~~~p~gl~~spdg~~lyv~~~~~~--------- 210 (305)
T 3dr2_A 146 FTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA------DLDHPNGLAFSPDEQTLYVSQTPEQ--------- 210 (305)
T ss_dssp EECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE------EESSEEEEEECTTSSEEEEEECCC----------
T ss_pred EeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe------cCCCCcceEEcCCCCEEEEEecCCc---------
Confidence 9642 236999999888766543 2346889999999998999975411
Q ss_pred eeecCCCceEEEEeCCCCcEE---EEe-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCC
Q 018242 174 ILSGDKTGRLMKYDPATKQVT---VLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPD 249 (359)
Q Consensus 174 ~~~~~~~g~v~~~d~~~~~~~---~~~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~ 249 (359)
....+.|++++.+++.+. .+. .....|.+++++++|+ +|++. .++|++|+.++. ....+ ..+..+.
T Consensus 211 ---~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~--~~gv~~~~~~g~---~~~~~-~~~~~~~ 280 (305)
T 3dr2_A 211 ---GHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSS--GTGVCVFDSDGQ---LLGHI-PTPGTAS 280 (305)
T ss_dssp -----CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECC--SSEEEEECTTSC---EEEEE-ECSSCCC
T ss_pred ---CCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEec--CCcEEEECCCCC---EEEEE-ECCCcee
Confidence 001246888876543321 111 1234689999999998 77775 457999986432 11222 2344588
Q ss_pred ceEECCCC-CEEEEEec
Q 018242 250 NIKRSPRG-GFWVGIHS 265 (359)
Q Consensus 250 ~i~~d~~G-~lwv~~~~ 265 (359)
++++++++ .||+++..
T Consensus 281 ~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 281 NCTFDQAQQRLFITGGP 297 (305)
T ss_dssp EEEECTTSCEEEEEETT
T ss_pred EEEEeCCCCEEEEEcCC
Confidence 89998777 59998863
No 80
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.49 E-value=3.7e-11 Score=108.10 Aligned_cols=197 Identities=9% Similarity=0.060 Sum_probs=125.2
Q ss_pred CCceEEEccCCCeeEEecC-CCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 35 GPESLAFDALGEGPYTGVS-DGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
.|.+++++++|+.+|++.. ++.|..||...+...... ........+.++++++++..+|++
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~------------------~~~~~~~~~~~~~~s~dg~~l~~~ 146 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVV------------------DVVEGLDGCHSANISPDNRTLWVP 146 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEE------------------EEECCCTTBCCCEECTTSSEEEEE
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccc------------------ccccCCCCceEEEECCCCCEEEEe
Confidence 8999999999997776654 678999998422111110 111122347789999955678888
Q ss_pred e-CCCcEEEEeCCC-CeEEEEee-cCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCC-
Q 018242 114 D-AYFGLLKVGPEG-GLATAVAT-QSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPA- 189 (359)
Q Consensus 114 ~-~~~~i~~~~~~~-~~~~~~~~-~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~- 189 (359)
+ ..+.|..++..+ ++...... .........+..++++|+|+++|++... .+.|..++.+
T Consensus 147 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~-----------------~~~i~~~~~~~ 209 (343)
T 1ri6_A 147 ALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL-----------------NSSVDVWELKD 209 (343)
T ss_dssp EGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEESSC
T ss_pred cCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC-----------------CCEEEEEEecC
Confidence 7 345688888876 65543220 0011112367789999999988888432 3467777763
Q ss_pred -CCcEEE---Ee---CC---CCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEee--cCCCCCCceEECCCC
Q 018242 190 -TKQVTV---LL---GN---LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA--QLPGFPDNIKRSPRG 257 (359)
Q Consensus 190 -~~~~~~---~~---~~---~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~p~~i~~d~~G 257 (359)
++++.. .. .. ...+.+++++||++.+|++...++.|.+|+++... +..+... ...+.|.+++++++|
T Consensus 210 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~s~dg 288 (343)
T 1ri6_A 210 PHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDG-SVLSKEGFQPTETQPRGFNVDHSG 288 (343)
T ss_dssp TTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS-CCEEEEEEEECSSSCCCEEECTTS
T ss_pred CCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCC-CceEEeeeecCCCccceEEECCCC
Confidence 344322 11 11 12345799999999999999888999999986321 1122222 233448899999999
Q ss_pred C-EEEEEecCC
Q 018242 258 G-FWVGIHSRR 267 (359)
Q Consensus 258 ~-lwv~~~~~~ 267 (359)
+ ||++....+
T Consensus 289 ~~l~~~~~~~~ 299 (343)
T 1ri6_A 289 KYLIAAGQKSH 299 (343)
T ss_dssp SEEEEECTTTC
T ss_pred CEEEEecCCCC
Confidence 7 666654433
No 81
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.49 E-value=5e-12 Score=119.16 Aligned_cols=161 Identities=12% Similarity=0.142 Sum_probs=114.3
Q ss_pred CcceEEEEec-CCCeEEEEeCC-CcEEEEeCCCCeEEEEeecCCCccccccceEEE-------eCCCCEEEEEeCCCccc
Q 018242 96 GRPLGLCFNK-TNGDLYIADAY-FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDI-------DQSTGIIYFTDSSSQFQ 166 (359)
Q Consensus 96 ~~p~gi~~~~-~~g~l~v~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------d~~g~~l~v~d~~~~~~ 166 (359)
..|.+|++|| ++++||++... ++|.++|++++.++.+..... ..+..|++|++ +++|++||+++....-.
T Consensus 139 ~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~-~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 139 SDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINT-IPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG 217 (496)
T ss_dssp CSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTT-SSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG
T ss_pred CCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCc-cccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc
Confidence 4689999998 37999999764 469999999999887765322 24557999999 99998899997652100
Q ss_pred cccceeeeeecCCCceEEEEeCCC-CcEE-----EEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcC-------CC
Q 018242 167 RRNHISVILSGDKTGRLMKYDPAT-KQVT-----VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLK-------TS 233 (359)
Q Consensus 167 ~~~~~~~~~~~~~~g~v~~~d~~~-~~~~-----~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~-------~~ 233 (359)
.....|+.++++. +.+. .....+..|++++++|+++.||+++..+++|++|+++ ..
T Consensus 218 -----------~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg 286 (496)
T 3kya_A 218 -----------DESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNG 286 (496)
T ss_dssp -----------GGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTT
T ss_pred -----------ccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCc
Confidence 0012477776543 2331 1222456899999999777899999999999999987 33
Q ss_pred CCc-----c----eeEeecC--CCCCCceEECCCCC-EEEEEecCCC
Q 018242 234 KAG-----T----IEIVAQL--PGFPDNIKRSPRGG-FWVGIHSRRK 268 (359)
Q Consensus 234 ~~~-----~----~~~~~~~--~~~p~~i~~d~~G~-lwv~~~~~~~ 268 (359)
... . .+.+... ...|.+|++|++|+ ||++....+.
T Consensus 287 ~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~ 333 (496)
T 3kya_A 287 GSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHY 333 (496)
T ss_dssp CCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred eeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCE
Confidence 320 0 2222222 24578999999998 8999987664
No 82
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.48 E-value=1.6e-11 Score=112.98 Aligned_cols=210 Identities=13% Similarity=0.157 Sum_probs=144.6
Q ss_pred EEeeCCCCCCceEEEccCCCeeEEec-CCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEec
Q 018242 27 QYQIEGAIGPESLAFDALGEGPYTGV-SDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNK 105 (359)
Q Consensus 27 ~~~~~~~~~p~~i~~~~~G~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~ 105 (359)
.+..+. .+.+++++++|+.+|++. .++.|+.||..+++..... .....+.++++++
T Consensus 69 ~~~~~~--~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~---------------------~~~~~~~~~~~s~ 125 (391)
T 1l0q_A 69 TVPAGS--SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTV---------------------KTGKSPLGLALSP 125 (391)
T ss_dssp EEECSS--SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE---------------------ECSSSEEEEEECT
T ss_pred EEECCC--CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEE---------------------eCCCCcceEEECC
Confidence 444443 888999999999776554 5689999999887443221 1223578899999
Q ss_pred CCCeEEEEeCC-CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEE
Q 018242 106 TNGDLYIADAY-FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLM 184 (359)
Q Consensus 106 ~~g~l~v~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 184 (359)
++..+|++... +.|..+|..+++....... ...+..++++++|+++|++.. ..+.|+
T Consensus 126 dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-----~~~~~~~~~~~dg~~l~~~~~-----------------~~~~v~ 183 (391)
T 1l0q_A 126 DGKKLYVTNNGDKTVSVINTVTKAVINTVSV-----GRSPKGIAVTPDGTKVYVANF-----------------DSMSIS 183 (391)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEEEEEEC-----CSSEEEEEECTTSSEEEEEET-----------------TTTEEE
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcEEEEEec-----CCCcceEEECCCCCEEEEEeC-----------------CCCEEE
Confidence 55567777654 4589999988876543321 135678999999997888743 246799
Q ss_pred EEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEec--CCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCC-EEE
Q 018242 185 KYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAET--TSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWV 261 (359)
Q Consensus 185 ~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv 261 (359)
.+|..+++..........+.+++++++++.+|++.. .++.|..|++...+ .......+..|..++++++|+ +|+
T Consensus 184 ~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~ 260 (391)
T 1l0q_A 184 VIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK---ITARIPVGPDPAGIAVTPDGKKVYV 260 (391)
T ss_dssp EEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE---EEEEEECCSSEEEEEECTTSSEEEE
T ss_pred EEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe---EEEEEecCCCccEEEEccCCCEEEE
Confidence 999988776655444456789999999998998886 67899999976432 111122233467799999996 667
Q ss_pred EEecCCCccccccccCC-ccceeeecCCc
Q 018242 262 GIHSRRKGISKLVLSFP-WIGNVLIKLPI 289 (359)
Q Consensus 262 ~~~~~~~~~~~~~~~~~-~~g~~~~~~~~ 289 (359)
+....+. +.+++ ..++++..++.
T Consensus 261 s~~~d~~-----v~v~d~~~~~~~~~~~~ 284 (391)
T 1l0q_A 261 ALSFXNT-----VSVIDTATNTITATMAV 284 (391)
T ss_dssp EETTTTE-----EEEEETTTTEEEEEEEC
T ss_pred EcCCCCE-----EEEEECCCCcEEEEEEC
Confidence 7655443 45554 35666665544
No 83
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.48 E-value=9.3e-12 Score=125.30 Aligned_cols=178 Identities=13% Similarity=0.179 Sum_probs=114.0
Q ss_pred ceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC
Q 018242 37 ESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY 116 (359)
Q Consensus 37 ~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~ 116 (359)
.+|..+++|. +|+++. .+++++|+.+..+... . .........+. +. +|+||+++..
T Consensus 66 ~~i~~d~~g~-lWigT~-~Gl~~yd~~~~~f~~~-------------------~-~~~~~~i~~i~-~~-~g~lWigt~~ 121 (758)
T 3ott_A 66 YCGVIIDNTY-LYMGTD-NGILVYNYRADRYEQP-------------------E-TDFPTDVRTMA-LQ-GDTLWLGALN 121 (758)
T ss_dssp EEEEEETTTE-EEEEET-TEEEEEETTTTEECCC-------------------S-CCCCSCEEEEE-EE-TTEEEEEETT
T ss_pred EEEEEcCCCc-EEEEeC-CCeEEEeCCCCEEECc-------------------c-cCCCceEEEEE-ec-CCcEEEEcCC
Confidence 4678888888 999987 5799999988644320 0 00011223343 34 7999999865
Q ss_pred CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEE
Q 018242 117 FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVL 196 (359)
Q Consensus 117 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 196 (359)
||++++.++++++.+.......+...+..+..|.+|+ ||++. .++|+++++.+++++.+
T Consensus 122 -Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt-------------------~~Gl~~~~~~~~~~~~~ 180 (758)
T 3ott_A 122 -GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQ-IYVGT-------------------YNGLCRYIPSNGKFEGI 180 (758)
T ss_dssp -EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCC-EEEEE-------------------TTEEEEEETTTTEEEEE
T ss_pred -cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCC-EEEEe-------------------CCCHhhCccCCCceEEe
Confidence 9999999888876652211122334567889999999 99983 23699999987776654
Q ss_pred eCCCC------CCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecC-CCCCCceEECCCCCEEEEEe
Q 018242 197 LGNLS------FPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL-PGFPDNIKRSPRGGFWVGIH 264 (359)
Q Consensus 197 ~~~~~------~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~~i~~d~~G~lwv~~~ 264 (359)
..... ....+..+++++.||+.. . ++|++|+..... ...+..+ ......++.|++|+||+++.
T Consensus 181 ~~~~~~~~~~~~i~~i~~d~~~~~lWigt-~-~Gl~~~~~~~~~---~~~~~~l~~~~i~~i~~d~~g~lWigT~ 250 (758)
T 3ott_A 181 PLPVHSSQSNLFVNSLLEDTTRQCVWIGT-E-GYLFQYFPSTGQ---IKQTEAFHNNSIKSLALDGNGDLLAGTD 250 (758)
T ss_dssp CCCCCTTCSSCCEEEEEEETTTTEEEEEE-E-EEEEEEETTTTE---EEEEEEEEEEEEEEEEECTTCCEEEEET
T ss_pred cCCCccccccceeEEEEEECCCCEEEEEE-C-CCCeEEcCCCCe---EEeccCCCCCeEEEEEEcCCCCEEEEeC
Confidence 32111 123556666666567654 3 589999865432 2222111 11235688899999999984
No 84
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.48 E-value=3.9e-11 Score=107.64 Aligned_cols=211 Identities=14% Similarity=0.024 Sum_probs=133.8
Q ss_pred EEEEeeCCCC-CCceEEEccCCCeeEEe-cCCCEEEEEEcCCcceEE-EeecCCCCCCCCCCcccccccccc---cCCcc
Q 018242 25 VVQYQIEGAI-GPESLAFDALGEGPYTG-VSDGRIIKWHQDQRRWLH-FARTSPNRDGCEGAYEYDHAAKEH---ICGRP 98 (359)
Q Consensus 25 ~~~~~~~~~~-~p~~i~~~~~G~~l~~~-~~~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p 98 (359)
..++..+... .|.+++++++|+.+|++ ..++.|..||..+++... +. ... ....|
T Consensus 24 ~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~-------------------~~~~~~~~~~~ 84 (337)
T 1pby_B 24 DKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRID-------------------LSTPEERVKSL 84 (337)
T ss_dssp EEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEE-------------------CCBTTEEEECT
T ss_pred EEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEE-------------------cCCcccccccc
Confidence 3355555333 59999999999767655 456899999998765432 21 111 01147
Q ss_pred eEEEEecCCCeEEEEe------------CCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccc
Q 018242 99 LGLCFNKTNGDLYIAD------------AYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQ 166 (359)
Q Consensus 99 ~gi~~~~~~g~l~v~~------------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~ 166 (359)
.++++++++..+|++. ..+.|..+|.++++....... ...+..++++|+|+++|++
T Consensus 85 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~------- 152 (337)
T 1pby_B 85 FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-----PRQITMLAWARDGSKLYGL------- 152 (337)
T ss_dssp TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-----CSSCCCEEECTTSSCEEEE-------
T ss_pred cceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-----CCCcceeEECCCCCEEEEe-------
Confidence 7899999556788885 235799999988876443321 1257789999999988887
Q ss_pred cccceeeeeecCCCceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCC-----------------------
Q 018242 167 RRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSC----------------------- 223 (359)
Q Consensus 167 ~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~----------------------- 223 (359)
.+.|+.+|..+++..........+..++++||++.+|++....+
T Consensus 153 -------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (337)
T 1pby_B 153 -------------GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRT 219 (337)
T ss_dssp -------------SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEE
T ss_pred -------------CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeecccccccccccccccc
Confidence 23699999988776544332222344577889887777665544
Q ss_pred EEEEEEcCCCCCcceeEeecCCCCCCceEECCCCC-EEEEEecCCCccccccccCCc-cceeeecCC
Q 018242 224 RILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIHSRRKGISKLVLSFPW-IGNVLIKLP 288 (359)
Q Consensus 224 ~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~-~g~~~~~~~ 288 (359)
.|++|++...+.. ...+......|.+++++++|+ +|++ . +. +.+++. .++.+..++
T Consensus 220 ~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~-~~-----v~~~d~~~~~~~~~~~ 277 (337)
T 1pby_B 220 GLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--Y-NV-----LESFDLEKNASIKRVP 277 (337)
T ss_dssp EEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE--E-SE-----EEEEETTTTEEEEEEE
T ss_pred ceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe--C-Ce-----EEEEECCCCcCcceec
Confidence 4678887654322 111222334567799999997 6666 2 22 455543 455555443
No 85
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.48 E-value=9.6e-12 Score=113.70 Aligned_cols=179 Identities=15% Similarity=0.123 Sum_probs=111.5
Q ss_pred EEEEeeCCCCCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEe
Q 018242 25 VVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFN 104 (359)
Q Consensus 25 ~~~~~~~~~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~ 104 (359)
+++++. ++..|++|+++++|+.+|++...++|+++++++...+.+...+ . ........+.+|+++
T Consensus 10 ~~~va~-~l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~----------~----v~~~g~~g~~gia~~ 74 (353)
T 2g8s_A 10 VEVLQD-KLDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVP----------D----VWAHGQGGLLDVVLA 74 (353)
T ss_dssp EEEEEE-EESSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCC----------C----CCCSTTCSEEEEEEC
T ss_pred EEEEEC-CCCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCc----------c----cccCCCCCceeEEEC
Confidence 445554 5889999999999984566666799999997643111111000 0 111223457899999
Q ss_pred cC---CCeEEEEeCC--------CcEEEEeCCCC--e---EEEEeecCCC--ccccccceEEEeCCCCEEEEEeCCCccc
Q 018242 105 KT---NGDLYIADAY--------FGLLKVGPEGG--L---ATAVATQSEG--IPFRFCNSLDIDQSTGIIYFTDSSSQFQ 166 (359)
Q Consensus 105 ~~---~g~l~v~~~~--------~~i~~~~~~~~--~---~~~~~~~~~~--~~~~~~~~l~~d~~g~~l~v~d~~~~~~ 166 (359)
++ ++.||++... ..|.+++.+.+ . .+.+....+. ...+.+++|++++||. ||++......
T Consensus 75 pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~Gd~~~- 152 (353)
T 2g8s_A 75 PDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGY-LFIALGENNQ- 152 (353)
T ss_dssp TTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSE-EEEEECCTTC-
T ss_pred CCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCc-EEEEECCCCC-
Confidence 86 7999998542 25888876543 2 2233322221 2335678999999998 9999632110
Q ss_pred cccceeeeeecCCCceEEEEeCCCC-------------cEEEEeCCCCCCceEEEccCCCEEEEEecCCC
Q 018242 167 RRNHISVILSGDKTGRLMKYDPATK-------------QVTVLLGNLSFPNGVALSEDGNYILLAETTSC 223 (359)
Q Consensus 167 ~~~~~~~~~~~~~~g~v~~~d~~~~-------------~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~ 223 (359)
... ........|+|+++++++. ..+.+..+...|.+++++++...||+++...+
T Consensus 153 ~~~---~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~ 219 (353)
T 2g8s_A 153 RPT---AQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPR 219 (353)
T ss_dssp GGG---GGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSB
T ss_pred CCc---cCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCC
Confidence 000 0001133578999999853 23345556778999999995556999988753
No 86
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.47 E-value=1.1e-11 Score=107.74 Aligned_cols=196 Identities=12% Similarity=0.022 Sum_probs=130.6
Q ss_pred CCEEEEeeCCCCCCceEEEccCCCeeEEecC---CCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcce
Q 018242 23 QGVVQYQIEGAIGPESLAFDALGEGPYTGVS---DGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPL 99 (359)
Q Consensus 23 ~~~~~~~~~~~~~p~~i~~~~~G~~l~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 99 (359)
+.+.+++.++...|++++++++|+ +|+++. .+.|..+|+.+++...-. .+. ....+.
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg~-Lyvstg~~~~s~v~~iD~~tg~v~~~i------------------~l~-~~~fge 69 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAENDT-LFESTGLYGRSSVRQVALQTGKVENIH------------------KMD-DSYFGE 69 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTTE-EEEEECSTTTCEEEEEETTTCCEEEEE------------------ECC-TTCCEE
T ss_pred eEEEEEECCCCCCcccEEEeCCCe-EEEECCCCCCCEEEEEECCCCCEEEEE------------------ecC-CCcceE
Confidence 345588888777899999999886 888764 479999999988654321 111 111234
Q ss_pred EEEEecCCCeEEEEeCCC-cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecC
Q 018242 100 GLCFNKTNGDLYIADAYF-GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGD 178 (359)
Q Consensus 100 gi~~~~~~g~l~v~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~ 178 (359)
|++++ +++||++++.. .+.++|.++.++..-... . .+.+..+.+||+++|+++ +
T Consensus 70 Gi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~-g-----~~~g~glt~Dg~~l~vs~-g---------------- 124 (266)
T 2iwa_A 70 GLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTH-Q-----MKDGWGLATDGKILYGSD-G---------------- 124 (266)
T ss_dssp EEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEEC-C-----SSSCCEEEECSSSEEEEC-S----------------
T ss_pred EEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEEC-C-----CCCeEEEEECCCEEEEEC-C----------------
Confidence 66666 67999998765 488999998875432221 1 133445556777799995 2
Q ss_pred CCceEEEEeCCCCcEEEEeC------CCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecC--------
Q 018242 179 KTGRLMKYDPATKQVTVLLG------NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL-------- 244 (359)
Q Consensus 179 ~~g~v~~~d~~~~~~~~~~~------~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-------- 244 (359)
.+.|..+|+++.+...... ....|+++.+. ++ .+|++...++.|.++|.+..+....-.+..+
T Consensus 125 -s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~ 201 (266)
T 2iwa_A 125 -TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEG 201 (266)
T ss_dssp -SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTT
T ss_pred -CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-EEEEecCCCCeEEEEECCCCcEEEEEECCCccccccccc
Confidence 4579999999866543221 12357888887 66 5999998899999999865432111111111
Q ss_pred ---CCCCCceEECCCCC-EEEEEecC
Q 018242 245 ---PGFPDNIKRSPRGG-FWVGIHSR 266 (359)
Q Consensus 245 ---~~~p~~i~~d~~G~-lwv~~~~~ 266 (359)
...|+||++|++|+ +||+....
T Consensus 202 ~~~~~v~nGIa~~~~~~~lfVTgk~~ 227 (266)
T 2iwa_A 202 FRDIDVLNGIAWDQENKRIFVTGKLW 227 (266)
T ss_dssp CTTCCCEEEEEEETTTTEEEEEETTC
T ss_pred ccccCceEEEEEcCCCCEEEEECCCC
Confidence 12578999999874 88877543
No 87
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.46 E-value=4.5e-11 Score=111.61 Aligned_cols=193 Identities=14% Similarity=0.146 Sum_probs=132.9
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEe
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIAD 114 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~ 114 (359)
...+++++++|++++++..++.|..||.++++... .+......+.++++++++..+|++.
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~l~~~~ 230 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLAYKA--------------------TVDLTGKWSKILLYDPIRDLVYCSN 230 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEE--------------------EEECSSSSEEEEEEETTTTEEEEEE
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEE--------------------EEcCCCCCeeEEEEcCCCCEEEEEe
Confidence 34568999999977777888999999998764322 1122234578999999666677776
Q ss_pred CC-CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcE
Q 018242 115 AY-FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQV 193 (359)
Q Consensus 115 ~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 193 (359)
.. +.|..+|..+++....... ...+..++++|+|+++|++....... ....+.|+.||..+++.
T Consensus 231 ~~~~~i~~~d~~~~~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~~~~~----------~~~dg~i~~~d~~~~~~ 295 (433)
T 3bws_A 231 WISEDISVIDRKTKLEIRKTDK-----IGLPRGLLLSKDGKELYIAQFSASNQ----------ESGGGRLGIYSMDKEKL 295 (433)
T ss_dssp TTTTEEEEEETTTTEEEEECCC-----CSEEEEEEECTTSSEEEEEEEESCTT----------CSCCEEEEEEETTTTEE
T ss_pred cCCCcEEEEECCCCcEEEEecC-----CCCceEEEEcCCCCEEEEEECCCCcc----------ccCCCeEEEEECCCCcE
Confidence 44 4589999988875432221 23478899999998788874321000 01246799999987766
Q ss_pred EEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCC-EEEEEec
Q 018242 194 TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIHS 265 (359)
Q Consensus 194 ~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~~ 265 (359)
.........+.+++++|+++.+|++...++.|..|++...+. ...+ .....+.+++++++|+ +|++...
T Consensus 296 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~--~~~~-~~~~~~~~~~~s~dg~~l~~~~~~ 365 (433)
T 3bws_A 296 IDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKV--QKSI-PVFDKPNTIALSPDGKYLYVSCRG 365 (433)
T ss_dssp EEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEE--EEEE-ECSSSEEEEEECTTSSEEEEEECC
T ss_pred EeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcE--EEEe-cCCCCCCeEEEcCCCCEEEEEecC
Confidence 544333346789999999999999999999999999864321 1112 2334477899999997 7776654
No 88
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.46 E-value=9e-12 Score=112.58 Aligned_cols=187 Identities=16% Similarity=0.091 Sum_probs=125.8
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
..|.+++++++|+ +|++.. .+|+++|+++++++.+.... .......+..+++++ +|++|++
T Consensus 90 ~~v~~i~~~~dg~-l~v~~~-~gl~~~d~~~g~~~~~~~~~----------------~~~~~~~~~~i~~d~-~G~l~v~ 150 (326)
T 2ghs_A 90 FMGSALAKISDSK-QLIASD-DGLFLRDTATGVLTLHAELE----------------SDLPGNRSNDGRMHP-SGALWIG 150 (326)
T ss_dssp SCEEEEEEEETTE-EEEEET-TEEEEEETTTCCEEEEECSS----------------TTCTTEEEEEEEECT-TSCEEEE
T ss_pred CcceEEEEeCCCe-EEEEEC-CCEEEEECCCCcEEEEeeCC----------------CCCCCCCCCCEEECC-CCCEEEE
Confidence 4688999999999 777664 57999999887766553110 001123477899999 8899998
Q ss_pred eCC-------CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEE
Q 018242 114 DAY-------FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKY 186 (359)
Q Consensus 114 ~~~-------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 186 (359)
+.. .+|++++ +++++.+.. ....+++++++++|+++|+++.. .+.|+++
T Consensus 151 ~~~~~~~~~~~~l~~~~--~g~~~~~~~-----~~~~~~~i~~s~dg~~lyv~~~~-----------------~~~I~~~ 206 (326)
T 2ghs_A 151 TMGRKAETGAGSIYHVA--KGKVTKLFA-----DISIPNSICFSPDGTTGYFVDTK-----------------VNRLMRV 206 (326)
T ss_dssp EEETTCCTTCEEEEEEE--TTEEEEEEE-----EESSEEEEEECTTSCEEEEEETT-----------------TCEEEEE
T ss_pred eCCCcCCCCceEEEEEe--CCcEEEeeC-----CCcccCCeEEcCCCCEEEEEECC-----------------CCEEEEE
Confidence 742 3699999 466554432 22357899999999889999643 3478888
Q ss_pred eCC--CC-cE---EEEe---CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEEC-CC
Q 018242 187 DPA--TK-QV---TVLL---GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRS-PR 256 (359)
Q Consensus 187 d~~--~~-~~---~~~~---~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d-~~ 256 (359)
+.+ ++ .+ +.+. .....|.+++++++|+ +|++...+++|.+|+.++. ....+......|.+++++ ++
T Consensus 207 d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~g~---~~~~i~~~~~~~~~~af~g~d 282 (326)
T 2ghs_A 207 PLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTDGN---HIARYEVPGKQTTCPAFIGPD 282 (326)
T ss_dssp EBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTTCC---EEEEEECSCSBEEEEEEESTT
T ss_pred EcccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCCCC---EEEEEECCCCCcEEEEEecCC
Confidence 864 45 31 1121 1234588999999996 8888877789999986322 112222122246788987 67
Q ss_pred C-CEEEEEecCC
Q 018242 257 G-GFWVGIHSRR 267 (359)
Q Consensus 257 G-~lwv~~~~~~ 267 (359)
+ .||+++...+
T Consensus 283 ~~~L~vt~~~~~ 294 (326)
T 2ghs_A 283 ASRLLVTSAREH 294 (326)
T ss_dssp SCEEEEEEBCTT
T ss_pred CCEEEEEecCCC
Confidence 5 5999887643
No 89
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.44 E-value=2.8e-10 Score=100.28 Aligned_cols=176 Identities=9% Similarity=-0.018 Sum_probs=116.2
Q ss_pred CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccC-CcceEEEEecCCCeEEEEeCCCcEEEE
Q 018242 44 LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHIC-GRPLGLCFNKTNGDLYIADAYFGLLKV 122 (359)
Q Consensus 44 ~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~gi~~~~~~g~l~v~~~~~~i~~~ 122 (359)
.|++++++..++.|+.||+++++...- +.... ..++.+.+++ +|+++++ ..++|+.+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~--------------------~~~~~~~~~~~~~~~p-dG~ilvs-~~~~V~~~ 61 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWE--------------------YPLEKGWECNSVAATK-AGEILFS-YSKGAKMI 61 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEE--------------------EECCTTCCCCEEEECT-TSCEEEE-CBSEEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEE--------------------eCCCccCCCcCeEECC-CCCEEEe-CCCCEEEE
Confidence 456688888999999999977754321 11111 2477889999 8899984 45679999
Q ss_pred eCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEe--CC-
Q 018242 123 GPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLL--GN- 199 (359)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~- 199 (359)
|++ ++........ ....++.+.+.++|+ +++++.. ..+.|+.+++++..+..+. ..
T Consensus 62 d~~-G~~~W~~~~~---~~~~~~~~~~~~dG~-~lv~~~~----------------~~~~v~~vd~~Gk~l~~~~~~~~~ 120 (276)
T 3no2_A 62 TRD-GRELWNIAAP---AGCEMQTARILPDGN-ALVAWCG----------------HPSTILEVNMKGEVLSKTEFETGI 120 (276)
T ss_dssp CTT-SCEEEEEECC---TTCEEEEEEECTTSC-EEEEEES----------------TTEEEEEECTTSCEEEEEEECCSC
T ss_pred CCC-CCEEEEEcCC---CCccccccEECCCCC-EEEEecC----------------CCCEEEEEeCCCCEEEEEeccCCC
Confidence 995 5433222211 112456778899999 8887432 1347888998654333332 11
Q ss_pred ---CCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCC
Q 018242 200 ---LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 200 ---~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
...+.+++..++|+ ++++...+++|..||.++. ...-...+..|.++.+.++|+++++...++
T Consensus 121 ~~~~~~~~~v~~~~~G~-~lv~~~~~~~v~~~d~~G~----~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~ 186 (276)
T 3no2_A 121 ERPHAQFRQINKNKKGN-YLVPLFATSEVREIAPNGQ----LLNSVKLSGTPFSSAFLDNGDCLVACGDAH 186 (276)
T ss_dssp SSGGGSCSCCEECTTSC-EEEEETTTTEEEEECTTSC----EEEEEECSSCCCEEEECTTSCEEEECBTTS
T ss_pred CcccccccCceECCCCC-EEEEecCCCEEEEECCCCC----EEEEEECCCCccceeEcCCCCEEEEeCCCC
Confidence 12466788899998 5677888899999996532 111122345688888899999999876543
No 90
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.43 E-value=1.4e-11 Score=110.22 Aligned_cols=187 Identities=11% Similarity=0.045 Sum_probs=125.7
Q ss_pred CCCceEEEccCCCeeEEecC-C--CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeE
Q 018242 34 IGPESLAFDALGEGPYTGVS-D--GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDL 110 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~-~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l 110 (359)
..|.+|+++++|+ +|++.. . ..|+++++.+++++.+... .....+.|++..+ ++++
T Consensus 72 ~~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~~g~~~~~~~~-------------------~~~~~~~g~~~~~-~~~~ 130 (306)
T 2p4o_A 72 GKVSGLAFTSNGD-LVATGWNADSIPVVSLVKSDGTVETLLTL-------------------PDAIFLNGITPLS-DTQY 130 (306)
T ss_dssp SEEEEEEECTTSC-EEEEEECTTSCEEEEEECTTSCEEEEEEC-------------------TTCSCEEEEEESS-SSEE
T ss_pred CCceeEEEcCCCc-EEEEeccCCcceEEEEcCCCCeEEEEEeC-------------------CCccccCcccccC-CCcE
Confidence 4799999999999 666542 2 3699999877766654311 1123367888776 7889
Q ss_pred EEEeC-CCcEEEEeCCCCeEEEE--eec----CCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceE
Q 018242 111 YIADA-YFGLLKVGPEGGLATAV--ATQ----SEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRL 183 (359)
Q Consensus 111 ~v~~~-~~~i~~~~~~~~~~~~~--~~~----~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 183 (359)
|+++. .+.|+++|+.+++.+.. ... ........+++| +++|++||+++.. .+.|
T Consensus 131 ~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~-----------------~~~I 191 (306)
T 2p4o_A 131 LTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE-----------------KMLL 191 (306)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT-----------------TTEE
T ss_pred EEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC-----------------CCEE
Confidence 99986 45699999987643222 111 111234578887 7777779999764 3478
Q ss_pred EEEeCCC-CcE---EEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEee--cCC-CCCCceEEC--
Q 018242 184 MKYDPAT-KQV---TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA--QLP-GFPDNIKRS-- 254 (359)
Q Consensus 184 ~~~d~~~-~~~---~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~--~~~-~~p~~i~~d-- 254 (359)
++++.++ +++ +.+. ....|.+++++++|+ +|+++..+++|.+|+.++ ...... ..+ ..|.+++++
T Consensus 192 ~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~-l~va~~~~~~V~~~~~~G----~~~~~~~~~~~~~~p~~~a~~g~ 265 (306)
T 2p4o_A 192 LRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGN-LYGATHIYNSVVRIAPDR----STTIIAQAEQGVIGSTAVAFGQT 265 (306)
T ss_dssp EEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCC-EEEECBTTCCEEEECTTC----CEEEEECGGGTCTTEEEEEECCS
T ss_pred EEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCC-EEEEeCCCCeEEEECCCC----CEEEEeecccccCCceEEEEecc
Confidence 8888764 322 2222 235799999999997 899999999999998542 222221 223 458899998
Q ss_pred -CCC-CEEEEEecC
Q 018242 255 -PRG-GFWVGIHSR 266 (359)
Q Consensus 255 -~~G-~lwv~~~~~ 266 (359)
+++ .|||++..+
T Consensus 266 ~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 266 EGDCTAIYVVTNGG 279 (306)
T ss_dssp TTTTTEEEEEECTT
T ss_pred cCCCCEEEEECCCC
Confidence 675 699988753
No 91
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.43 E-value=2.3e-10 Score=100.87 Aligned_cols=227 Identities=15% Similarity=0.118 Sum_probs=145.4
Q ss_pred CCEEEEeeCCCCCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEE
Q 018242 23 QGVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLC 102 (359)
Q Consensus 23 ~~~~~~~~~~~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 102 (359)
+.+-++..+....++++.++++|+ +++ +.+++|+.+|+++.....+. . ........+.
T Consensus 26 ~~~w~~~~~~~~~~~~~~~~pdG~-ilv-s~~~~V~~~d~~G~~~W~~~-------------------~-~~~~~~~~~~ 83 (276)
T 3no2_A 26 EIVWEYPLEKGWECNSVAATKAGE-ILF-SYSKGAKMITRDGRELWNIA-------------------A-PAGCEMQTAR 83 (276)
T ss_dssp EEEEEEECCTTCCCCEEEECTTSC-EEE-ECBSEEEEECTTSCEEEEEE-------------------C-CTTCEEEEEE
T ss_pred eEEEEeCCCccCCCcCeEECCCCC-EEE-eCCCCEEEECCCCCEEEEEc-------------------C-CCCccccccE
Confidence 334455555435799999999999 555 44678999999543333332 0 0012345667
Q ss_pred EecCCCeEEEEeCC--CcEEEEeCCCCeEEEEeecCC-CccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCC
Q 018242 103 FNKTNGDLYIADAY--FGLLKVGPEGGLATAVATQSE-GIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDK 179 (359)
Q Consensus 103 ~~~~~g~l~v~~~~--~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~ 179 (359)
+.+ +|++++++.. ..++.+++++..+..+..... ..+...+..+.++++|+ +++++..
T Consensus 84 ~~~-dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~~----------------- 144 (276)
T 3no2_A 84 ILP-DGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFA----------------- 144 (276)
T ss_dssp ECT-TSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEETT-----------------
T ss_pred ECC-CCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCC-EEEEecC-----------------
Confidence 777 8888888654 358888987665444321111 12334567788999999 8887543
Q ss_pred CceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec--CC----CCCCceEE
Q 018242 180 TGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ--LP----GFPDNIKR 253 (359)
Q Consensus 180 ~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~~----~~p~~i~~ 253 (359)
.+.|+.+|++ |+..........|.+....++++ ++++...+++|..++.+..+.- -.+.. .+ ..|.++.+
T Consensus 145 ~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~~~--w~~~~~~~~~~~l~~~~~~~~ 220 (276)
T 3no2_A 145 TSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNRIV--RRVNANDIEGVQLFFVAQLFP 220 (276)
T ss_dssp TTEEEEECTT-SCEEEEEECSSCCCEEEECTTSC-EEEECBTTSEEEEECTTTCCEE--EEEEGGGSBSCCCSEEEEEEE
T ss_pred CCEEEEECCC-CCEEEEEECCCCccceeEcCCCC-EEEEeCCCCeEEEEeCcCCcEE--EEecCCCCCCccccccccceE
Confidence 4689999998 66655443335678888888887 6777788889999987633221 11211 22 13678899
Q ss_pred CCCCCEEEEEecCCCccccccccCCccceeeecCCccceeeeeecccccCcceEEEEECCCCCEEEEEEc
Q 018242 254 SPRGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEE 323 (359)
Q Consensus 254 d~~G~lwv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 323 (359)
.++|+++++++.++.. +.. .... ..++.++++|+++..|..
T Consensus 221 ~~~G~i~v~~~~g~~~-------~~~---------------------~~~~-~~~~~~~~~g~~~W~~~~ 261 (276)
T 3no2_A 221 LQNGGLYICNWQGHDR-------EAG---------------------KGKH-PQLVEIDSEGKVVWQLND 261 (276)
T ss_dssp CTTSCEEEEEECTTCT-------TGG---------------------GSCC-CSEEEECTTSBEEEEECC
T ss_pred cCCCCEEEEeccCccc-------ccc---------------------ccCC-ceEEEECCCCCEEEEecC
Confidence 9999999998754310 000 0011 457888999999988864
No 92
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.41 E-value=1.1e-10 Score=100.86 Aligned_cols=196 Identities=10% Similarity=0.115 Sum_probs=127.3
Q ss_pred eeCC-CCCCceEEEccCCCeeEE-ecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecC
Q 018242 29 QIEG-AIGPESLAFDALGEGPYT-GVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKT 106 (359)
Q Consensus 29 ~~~~-~~~p~~i~~~~~G~~l~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~ 106 (359)
++++ ...+.++++++++..||+ ...++.|+.+|+.+.....+. + .....+.||++..
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~-------------------l-~g~~D~EGIa~~~- 79 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIP-------------------L-DFVKDLETIEYIG- 79 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEE-------------------C-SSCSSEEEEEECS-
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEe-------------------c-CCCCChHHeEEeC-
Confidence 3444 367899999998766885 666789999999844233321 1 1224578999997
Q ss_pred CCeEEEEeCC-CcEEEEeCCCCe-EEEE--ee-cC-CCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCC
Q 018242 107 NGDLYIADAY-FGLLKVGPEGGL-ATAV--AT-QS-EGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKT 180 (359)
Q Consensus 107 ~g~l~v~~~~-~~i~~~~~~~~~-~~~~--~~-~~-~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~ 180 (359)
++.+|+++.. ++++.++..... ...+ .. .. .........+|++|+++++||++.- ...
T Consensus 80 ~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E----------------~~p 143 (255)
T 3qqz_A 80 DNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKE----------------KNP 143 (255)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEE----------------SSS
T ss_pred CCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEEC----------------cCC
Confidence 8888888654 467776543322 1111 11 11 1122345689999999977999831 112
Q ss_pred ceEEEEe--CCCCcEEEEeC-------CCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCC------
Q 018242 181 GRLMKYD--PATKQVTVLLG-------NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLP------ 245 (359)
Q Consensus 181 g~v~~~d--~~~~~~~~~~~-------~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~------ 245 (359)
..|+.++ +.+..+..... ....+.+++++|..+.+|+....++.|..+|.++. ...+..+.
T Consensus 144 ~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~----~~~~~~L~~g~~~l 219 (255)
T 3qqz_A 144 IEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE----VIGEMSLTKGSRGL 219 (255)
T ss_dssp EEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC----EEEEEECSTTGGGC
T ss_pred ceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC----EEEEEEcCCccCCc
Confidence 3688887 22222332211 23457899999998889999999999999987654 12222211
Q ss_pred ----CCCCceEECCCCCEEEEEec
Q 018242 246 ----GFPDNIKRSPRGGFWVGIHS 265 (359)
Q Consensus 246 ----~~p~~i~~d~~G~lwv~~~~ 265 (359)
..|.||++|++|+|||++-+
T Consensus 220 ~~~~~qpEGia~d~~G~lyIvsE~ 243 (255)
T 3qqz_A 220 SHNIKQAEGVAMDASGNIYIVSEP 243 (255)
T ss_dssp SSCCCSEEEEEECTTCCEEEEETT
T ss_pred ccccCCCCeeEECCCCCEEEEcCC
Confidence 24789999999999999765
No 93
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.40 E-value=2.2e-10 Score=110.94 Aligned_cols=199 Identities=11% Similarity=0.056 Sum_probs=130.8
Q ss_pred EEEEeeCCCCCCceEEEccCCCeeEEecCCCEEEEEEcC--CcceEEEeecCCCCCCCCCCcccccccccccCCcceEEE
Q 018242 25 VVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQD--QRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLC 102 (359)
Q Consensus 25 ~~~~~~~~~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 102 (359)
+.++..+ ..|+++.+++||+.+|++..++.|..+|.. +.+... .+ .....|.+++
T Consensus 190 ~~~i~~g--~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~--------------------~i-~~G~~P~~ia 246 (567)
T 1qks_A 190 KTVLDTG--YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA--------------------EI-KIGSEARSIE 246 (567)
T ss_dssp EEEEECS--SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEE--------------------EE-ECCSEEEEEE
T ss_pred EEEEeCC--CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeE--------------------EE-ecCCCCceeE
Confidence 3356665 489999999999999999888999999985 442211 11 2234689999
Q ss_pred Ee----cCCCeEEEEeCC-CcEEEEeCCCCeEEEEeecC----CC---ccccccceEEEeCCCCEEEEEeCCCccccccc
Q 018242 103 FN----KTNGDLYIADAY-FGLLKVGPEGGLATAVATQS----EG---IPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNH 170 (359)
Q Consensus 103 ~~----~~~g~l~v~~~~-~~i~~~~~~~~~~~~~~~~~----~~---~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~ 170 (359)
++ +++..+|+++.. +.+..+|..+.+........ .. .+...+..+..++++..++++.
T Consensus 247 ~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~---------- 316 (567)
T 1qks_A 247 TSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV---------- 316 (567)
T ss_dssp ECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE----------
T ss_pred EccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe----------
Confidence 99 567789998765 45888998887654332211 10 0112445778888877445442
Q ss_pred eeeeeecCCCceEEEEeCCCCcEEEE--eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecC-CCC
Q 018242 171 ISVILSGDKTGRLMKYDPATKQVTVL--LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL-PGF 247 (359)
Q Consensus 171 ~~~~~~~~~~g~v~~~d~~~~~~~~~--~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~ 247 (359)
...|.|+.+|..+.....+ ......+.++.|++|++++|+++..++.|.++|.+..+. ...... ...
T Consensus 317 -------~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl---~~~i~vgg~~ 386 (567)
T 1qks_A 317 -------KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL---VAIEDTGGQT 386 (567)
T ss_dssp -------TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE---EEEEECSSSS
T ss_pred -------cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcE---EEEEeccCcC
Confidence 2356899998765432111 223456788999999999999999999999999865432 111223 223
Q ss_pred C---CceE-ECCC-CCEEEEEecC
Q 018242 248 P---DNIK-RSPR-GGFWVGIHSR 266 (359)
Q Consensus 248 p---~~i~-~d~~-G~lwv~~~~~ 266 (359)
| .+.. ++++ |.+|++...+
T Consensus 387 Phpg~g~~~~~p~~g~v~~t~~~g 410 (567)
T 1qks_A 387 PHPGRGANFVHPTFGPVWATSHMG 410 (567)
T ss_dssp BCCTTCEEEEETTTEEEEEEEBSS
T ss_pred CCCccceeeECCCCCcEEEeCCCC
Confidence 3 3554 4776 6799876543
No 94
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.40 E-value=1.2e-09 Score=105.74 Aligned_cols=264 Identities=13% Similarity=0.126 Sum_probs=159.0
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
....++++.|+|+.+.++..++.|..||..+.....+ .........+++++++..+..+
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~---------------------~~~~~~v~~~~~s~~g~~l~~~ 362 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTL---------------------TGHSSSVWGVAFSPDGQTIASA 362 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEE---------------------CCCSSCEEEEEECTTSSEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEE---------------------eCCCCCEEEEEECCCCCEEEEE
Confidence 3456899999999888888889999999877644332 2223446789999944444445
Q ss_pred eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcE
Q 018242 114 DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQV 193 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 193 (359)
...+.+..++..+.....+.. ....+..++++|+|++|..+ ...+.|..||.++...
T Consensus 363 ~~dg~v~~~~~~~~~~~~~~~-----~~~~v~~~~~s~dg~~l~~~------------------~~d~~v~~~~~~~~~~ 419 (577)
T 2ymu_A 363 SDDKTVKLWNRNGQLLQTLTG-----HSSSVRGVAFSPDGQTIASA------------------SDDKTVKLWNRNGQLL 419 (577)
T ss_dssp ETTSEEEEEETTCCEEEEEEC-----CSSCEEEEEECTTSSCEEEE------------------ETTSEEEEECTTCCEE
T ss_pred eCCCEEEEEcCCCCEEEEecC-----CCCCeEEEEECCCCCEEEEE------------------eCCCEEEEEeCCCCEE
Confidence 544457778876554443322 12356789999999944333 2245788888765444
Q ss_pred EEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCCCccccc
Q 018242 194 TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKL 273 (359)
Q Consensus 194 ~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~~~~~~ 273 (359)
..+.........++++||++. +++...++.|..|+.... ....+.........++++++|++.++....+.
T Consensus 420 ~~~~~~~~~v~~~~~s~d~~~-l~~~~~d~~v~~w~~~~~---~~~~~~~~~~~v~~~~~spd~~~las~~~d~~----- 490 (577)
T 2ymu_A 420 QTLTGHSSSVWGVAFSPDDQT-IASASDDKTVKLWNRNGQ---LLQTLTGHSSSVRGVAFSPDGQTIASASDDKT----- 490 (577)
T ss_dssp EEEECCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTSC---EEEEEECCSSCEEEEEECTTSCEEEEEETTSE-----
T ss_pred EEecCCCCCeEEEEECCCCCE-EEEEcCCCEEEEEECCCC---EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE-----
Confidence 445444455678999999985 455567789999996432 12222222333466899999998876665554
Q ss_pred cccCCccceeeecCCccceeeeeecccccCc-------ceEEEEECCCCCEEEEEEccCCceeeceEEEEEe-CCEEEEe
Q 018242 274 VLSFPWIGNVLIKLPIDIVKIHSSLVKLSGN-------GGMAMRISEQGNVLEILEEIGRKMWRSISEVEEK-DGNLWIG 345 (359)
Q Consensus 274 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~l~ig 345 (359)
+..++.+++.+..+......+..+.+..+.. ...+..+|.+++.+..+..+.+ .+..+... +|+..++
T Consensus 491 i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~----~v~~~~fs~dg~~l~s 566 (577)
T 2ymu_A 491 VKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSS----SVWGVAFSPDGQTIAS 566 (577)
T ss_dssp EEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSS----CEEEEEECTTSSCEEE
T ss_pred EEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCC----CEEEEEEcCCCCEEEE
Confidence 6666777877776655444555554443222 0233344555555555543322 33444433 5554444
Q ss_pred cCCCCeEEE
Q 018242 346 SVNMPYAGL 354 (359)
Q Consensus 346 ~~~~~~l~~ 354 (359)
.-.+..|.+
T Consensus 567 ~~~D~~i~~ 575 (577)
T 2ymu_A 567 ASSDKTVKL 575 (577)
T ss_dssp EETTSCEEE
T ss_pred EeCCCEEEE
Confidence 333444443
No 95
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.39 E-value=1.2e-10 Score=106.27 Aligned_cols=207 Identities=15% Similarity=0.132 Sum_probs=122.6
Q ss_pred CCCCceEEEccCCCeeEEec-CCCEEEEEEcCCcc-eEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeE
Q 018242 33 AIGPESLAFDALGEGPYTGV-SDGRIIKWHQDQRR-WLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDL 110 (359)
Q Consensus 33 ~~~p~~i~~~~~G~~l~~~~-~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l 110 (359)
...|..+++ +|+.+|++. .++.+..|+..... .........+.+. +|. ........+++++++|++..+
T Consensus 99 ~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~--~~~-----~~~~~~~~~~~~~~spdg~~l 169 (361)
T 3scy_A 99 GADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGS--GPD-----KERQTMPHLHCVRITPDGKYL 169 (361)
T ss_dssp SSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCC--CSC-----TTTCSSCCEEEEEECTTSSEE
T ss_pred CCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCC--CCC-----ccccCCCcceEEEECCCCCEE
Confidence 357888888 777677765 56789999976431 1111000000000 000 000111235789999944558
Q ss_pred EEEeCCC-cEEEEeCC--CC----e-EEEE---eecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCC
Q 018242 111 YIADAYF-GLLKVGPE--GG----L-ATAV---ATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDK 179 (359)
Q Consensus 111 ~v~~~~~-~i~~~~~~--~~----~-~~~~---~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~ 179 (359)
|+++... .+..++.+ ++ + +... .. ........|.+++++|+|+++|+++..
T Consensus 170 ~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~v~~~~----------------- 231 (361)
T 3scy_A 170 LADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA-FKVAPGSGPRHLIFNSDGKFAYLINEI----------------- 231 (361)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE-EECCTTCCEEEEEECTTSSEEEEEETT-----------------
T ss_pred EEEeCCCCEEEEEEEcCCCCcccccceeecccccc-eecCCCCCCeEEEEcCCCCEEEEEcCC-----------------
Confidence 8887643 46666543 43 2 2111 00 001123467889999999988888532
Q ss_pred CceEEEEeCCCCcEEEEe------CCCCCCceEEEccCCCEEEEEecC-CCEEEEEEcCCCCCcceeEeec--CCCCCCc
Q 018242 180 TGRLMKYDPATKQVTVLL------GNLSFPNGVALSEDGNYILLAETT-SCRILRYWLKTSKAGTIEIVAQ--LPGFPDN 250 (359)
Q Consensus 180 ~g~v~~~d~~~~~~~~~~------~~~~~p~gia~~~d~~~l~v~~~~-~~~i~~~~~~~~~~~~~~~~~~--~~~~p~~ 250 (359)
.+.|..|+.++++++.+. .....|.+++++|||++||+++.. .+.|..|+++.. .+..+.... ....|.+
T Consensus 232 ~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~-~g~~~~~~~~~~g~~~~~ 310 (361)
T 3scy_A 232 GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDET-NGTLTKVGYQLTGIHPRN 310 (361)
T ss_dssp TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTT-TCCEEEEEEEECSSCCCE
T ss_pred CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCC-CCcEEEeeEecCCCCCce
Confidence 346777776666654332 123446799999999999999988 789999998632 112222221 2446889
Q ss_pred eEECCCCC-EEEEEecCC
Q 018242 251 IKRSPRGG-FWVGIHSRR 267 (359)
Q Consensus 251 i~~d~~G~-lwv~~~~~~ 267 (359)
++++++|+ ||++....+
T Consensus 311 ~~~spdg~~l~~~~~~~~ 328 (361)
T 3scy_A 311 FIITPNGKYLLVACRDTN 328 (361)
T ss_dssp EEECTTSCEEEEEETTTT
T ss_pred EEECCCCCEEEEEECCCC
Confidence 99999997 777765443
No 96
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.37 E-value=6.7e-11 Score=106.75 Aligned_cols=231 Identities=13% Similarity=0.073 Sum_probs=126.5
Q ss_pred EEEeeCCCCCCceEEEccCCCeeEEe-cCCCEEEEEEcCCcceEEEeecCCCCCCCCCCccccccccccc----CCcceE
Q 018242 26 VQYQIEGAIGPESLAFDALGEGPYTG-VSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHI----CGRPLG 100 (359)
Q Consensus 26 ~~~~~~~~~~p~~i~~~~~G~~l~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~p~g 100 (359)
.++..+....|.+++++++|+.+|++ ..++.|+.||+.+++..... ..... ...|.+
T Consensus 35 ~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~------------------~~~~~~~~~~~~~~~ 96 (349)
T 1jmx_B 35 KSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA------------------NLSSVPGEVGRSMYS 96 (349)
T ss_dssp EEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE------------------ESCCSTTEEEECSSC
T ss_pred EEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE------------------Ecccccccccccccc
Confidence 35555543479999999999867765 45689999999877543211 11000 123678
Q ss_pred EEEecCCCeEEEEeCC------------CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCC-cccc
Q 018242 101 LCFNKTNGDLYIADAY------------FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSS-QFQR 167 (359)
Q Consensus 101 i~~~~~~g~l~v~~~~------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~-~~~~ 167 (359)
+++++++..++++... +.|..+|.++++......... ....+..++++++|+ +|++...- .|+.
T Consensus 97 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~-l~~~~~~i~~~d~ 173 (349)
T 1jmx_B 97 FAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP--MPRQVYLMRAADDGS-LYVAGPDIYKMDV 173 (349)
T ss_dssp EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE--CCSSCCCEEECTTSC-EEEESSSEEEECT
T ss_pred eEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc--CCCcccceeECCCCc-EEEccCcEEEEeC
Confidence 9999966678877633 568889987644211111011 112467888999999 99863210 0000
Q ss_pred cc-ceeeeeecC---------------------------------------------CCceEEEEeCCCCcEEEEe--CC
Q 018242 168 RN-HISVILSGD---------------------------------------------KTGRLMKYDPATKQVTVLL--GN 199 (359)
Q Consensus 168 ~~-~~~~~~~~~---------------------------------------------~~g~v~~~d~~~~~~~~~~--~~ 199 (359)
.. ......... ....++.++..++++..+. ..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (349)
T 1jmx_B 174 KTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADL 253 (349)
T ss_dssp TTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEEC
T ss_pred CCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccC
Confidence 00 000000000 0001112333333332221 11
Q ss_pred CCCCceEEEcc-CCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCC-EEEEEecCCCccccccccC
Q 018242 200 LSFPNGVALSE-DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIHSRRKGISKLVLSF 277 (359)
Q Consensus 200 ~~~p~gia~~~-d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~ 277 (359)
...+.+++++| |++.+|++ .+.|++||+...+ .......+..|.+++++++|+ ||++. ..+. +.++
T Consensus 254 ~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~~-~~~~-----v~v~ 321 (349)
T 1jmx_B 254 TELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRK---LIKAANLDHTYYCVAFDKKGDKLYLGG-TFND-----LAVF 321 (349)
T ss_dssp SSCEEEEEECSSCTTEEEEE---ESEEEEEETTTTE---EEEEEECSSCCCEEEECSSSSCEEEES-BSSE-----EEEE
T ss_pred CCcceeeEecCCCCCEEEEE---cCeEEEEECccCe---EEEEEcCCCCccceEECCCCCEEEEec-CCCe-----EEEE
Confidence 22456788889 99988888 6799999976432 111222344578899999985 77753 2222 3444
Q ss_pred C-ccceeeecCCc
Q 018242 278 P-WIGNVLIKLPI 289 (359)
Q Consensus 278 ~-~~g~~~~~~~~ 289 (359)
+ ..++.+..++.
T Consensus 322 d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 322 NPDTLEKVKNIKL 334 (349)
T ss_dssp ETTTTEEEEEEEC
T ss_pred eccccceeeeeec
Confidence 3 24555555443
No 97
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.36 E-value=2.2e-09 Score=103.94 Aligned_cols=267 Identities=13% Similarity=0.128 Sum_probs=159.2
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
....++++.|+|+.+.++..++.|..||..+.....+ ........++++++++..+..+
T Consensus 263 ~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~---------------------~~h~~~v~~~~~~~~~~~l~t~ 321 (577)
T 2ymu_A 263 SSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTL---------------------TGHSSSVWGVAFSPDGQTIASA 321 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEE---------------------CCCSSCEEEEEECTTSSEEEEE
T ss_pred CCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEE---------------------ecCCCCeEEEEECCCCCEEEEE
Confidence 4556899999999888888889999999765422222 2223446789999944444444
Q ss_pred eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcE
Q 018242 114 DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQV 193 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 193 (359)
...+.|..++..+.....+.. ....+..++++|+|+++..+ ...+.|..++.++..+
T Consensus 322 ~~d~~i~~w~~~~~~~~~~~~-----~~~~v~~~~~s~~g~~l~~~------------------~~dg~v~~~~~~~~~~ 378 (577)
T 2ymu_A 322 SDDKTVKLWNRNGQHLQTLTG-----HSSSVWGVAFSPDGQTIASA------------------SDDKTVKLWNRNGQLL 378 (577)
T ss_dssp ETTSCEEEEETTSCEEEEECC-----CSSCEEEEEECTTSSEEEEE------------------ETTSEEEEEETTCCEE
T ss_pred eCCCeEEEEeCCCCeeEEEeC-----CCCCEEEEEECCCCCEEEEE------------------eCCCEEEEEcCCCCEE
Confidence 544458888988776554322 12356789999999944443 2245788888765555
Q ss_pred EEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCCCccccc
Q 018242 194 TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKL 273 (359)
Q Consensus 194 ~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~~~~~~ 273 (359)
..+.........++++||++.+ ++...++.|..|+.... ....+.........+++++++++.++....+.
T Consensus 379 ~~~~~~~~~v~~~~~s~dg~~l-~~~~~d~~v~~~~~~~~---~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~----- 449 (577)
T 2ymu_A 379 QTLTGHSSSVRGVAFSPDGQTI-ASASDDKTVKLWNRNGQ---LLQTLTGHSSSVWGVAFSPDDQTIASASDDKT----- 449 (577)
T ss_dssp EEEECCSSCEEEEEECTTSSCE-EEEETTSEEEEECTTCC---EEEEEECCSSCEEEEEECTTSSEEEEEETTSE-----
T ss_pred EEecCCCCCeEEEEECCCCCEE-EEEeCCCEEEEEeCCCC---EEEEecCCCCCeEEEEECCCCCEEEEEcCCCE-----
Confidence 5554445567899999999855 44556789999985432 12222222333456899999987776655553
Q ss_pred cccCCccceeeecCCccceeeeeecccccCc-------ceEEEEECCCCCEEEEEEccCCceeeceEEEEEe-CCEEEEe
Q 018242 274 VLSFPWIGNVLIKLPIDIVKIHSSLVKLSGN-------GGMAMRISEQGNVLEILEEIGRKMWRSISEVEEK-DGNLWIG 345 (359)
Q Consensus 274 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~l~ig 345 (359)
+..++.+++.+..+......+..+.+..+.. ...+..++.+++.+..+..+. ..+..+... +|++.++
T Consensus 450 v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~----~~v~~l~~s~dg~~l~s 525 (577)
T 2ymu_A 450 VKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHS----SSVRGVAFSPDGQTIAS 525 (577)
T ss_dssp EEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCS----SCEEEEEECTTSSCEEE
T ss_pred EEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCC----CCEEEEEEcCCCCEEEE
Confidence 5556666776665544434444444432221 012333344555555544322 233444433 4554444
Q ss_pred cCCCCeEEEEcC
Q 018242 346 SVNMPYAGLYNY 357 (359)
Q Consensus 346 ~~~~~~l~~~~~ 357 (359)
.-.+..|.+.++
T Consensus 526 ~~~dg~v~lwd~ 537 (577)
T 2ymu_A 526 ASDDKTVKLWNR 537 (577)
T ss_dssp EETTSEEEEECT
T ss_pred EECcCEEEEEeC
Confidence 444566766654
No 98
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.36 E-value=8.9e-11 Score=107.58 Aligned_cols=198 Identities=16% Similarity=0.120 Sum_probs=122.4
Q ss_pred CCceEEEccCCCe--eEEec-------------CCCEEEEEEcCC-cceEE-EeecCCCCCCCCCCccccccccc-ccCC
Q 018242 35 GPESLAFDALGEG--PYTGV-------------SDGRIIKWHQDQ-RRWLH-FARTSPNRDGCEGAYEYDHAAKE-HICG 96 (359)
Q Consensus 35 ~p~~i~~~~~G~~--l~~~~-------------~~~~i~~~d~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 96 (359)
.|.+++++|+|+. ++++. .++.+..|+.+. ++... +. ... ....
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~------------------~~~~~~~~ 145 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQ------------------NYEYQENT 145 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEE------------------EEECCTTC
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEe------------------eEEeCCCC
Confidence 4888999999994 34443 467788888753 33221 11 000 1224
Q ss_pred cceEEEEecCCCeEEEEeCC-CcEEEEeCC-CCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeee
Q 018242 97 RPLGLCFNKTNGDLYIADAY-FGLLKVGPE-GGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVI 174 (359)
Q Consensus 97 ~p~gi~~~~~~g~l~v~~~~-~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~ 174 (359)
.++++++++++..+|+++.. +.|..++.+ +++.+.+...........|.+++++|+|+++|+++..
T Consensus 146 ~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~------------ 213 (365)
T 1jof_A 146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEA------------ 213 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETT------------
T ss_pred cceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECC------------
Confidence 58899999955568888754 468888887 6765433221000012468899999999989988432
Q ss_pred eecCCCceEEEEeCCCCcEEE----Ee---CCC---C-------CCceEE-EccCCCEEEEEecCCC-----EEEEEEcC
Q 018242 175 LSGDKTGRLMKYDPATKQVTV----LL---GNL---S-------FPNGVA-LSEDGNYILLAETTSC-----RILRYWLK 231 (359)
Q Consensus 175 ~~~~~~g~v~~~d~~~~~~~~----~~---~~~---~-------~p~gia-~~~d~~~l~v~~~~~~-----~i~~~~~~ 231 (359)
...-.++.++.+++++.. +. .+. . .|.+++ ++|||++||+++...+ .|.+|+++
T Consensus 214 ---~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 214 ---GNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp ---TTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred ---CCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 111235556665565431 21 111 1 477899 9999999999987665 89999986
Q ss_pred CCCCcceeE---eec-CCCCCCceEECC---CCC-EEEEEecCC
Q 018242 232 TSKAGTIEI---VAQ-LPGFPDNIKRSP---RGG-FWVGIHSRR 267 (359)
Q Consensus 232 ~~~~~~~~~---~~~-~~~~p~~i~~d~---~G~-lwv~~~~~~ 267 (359)
.. +.... ... ....|.++++++ +|+ |+++...++
T Consensus 291 ~~--g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~ 332 (365)
T 1jof_A 291 DC--GSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEG 332 (365)
T ss_dssp TT--SCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSC
T ss_pred CC--CCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCC
Confidence 32 22221 122 334588899998 786 666665444
No 99
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.33 E-value=1.2e-10 Score=108.28 Aligned_cols=237 Identities=11% Similarity=-0.017 Sum_probs=139.7
Q ss_pred EEEEeeCCCCCCceEEEccCCCeeEEecC----------CCEEEEEEcCCcceEE-EeecCCCCCCCCCCcccccccccc
Q 018242 25 VVQYQIEGAIGPESLAFDALGEGPYTGVS----------DGRIIKWHQDQRRWLH-FARTSPNRDGCEGAYEYDHAAKEH 93 (359)
Q Consensus 25 ~~~~~~~~~~~p~~i~~~~~G~~l~~~~~----------~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 93 (359)
+-+++.+. .| +++++|||+.+|++.. .+.|..+|+.+.+... +...... . ..
T Consensus 112 v~~I~vG~--~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~-------------r-~~ 174 (426)
T 3c75_H 112 LGMTDGGF--LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAP-------------R-FL 174 (426)
T ss_dssp EEEEEECS--SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC-------------C-CC
T ss_pred EEEEECCC--CC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcc-------------c-cc
Confidence 44777774 78 9999999999999873 4679999998875432 2110000 0 00
Q ss_pred cCCcceEEEEecCCCeEEEEeCC--CcEEEEeCCCCeEEEEeecCCCccccccce----EEEeCCCCEEEEEeCCCc---
Q 018242 94 ICGRPLGLCFNKTNGDLYIADAY--FGLLKVGPEGGLATAVATQSEGIPFRFCNS----LDIDQSTGIIYFTDSSSQ--- 164 (359)
Q Consensus 94 ~~~~p~gi~~~~~~g~l~v~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~d~~g~~l~v~d~~~~--- 164 (359)
....|++++++++++.+|+++.. +.|..+|..++++...... .+.....|.+ +...++|+.+|++.....
T Consensus 175 ~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v-~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~ 253 (426)
T 3c75_H 175 VGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV-PDCYHIFPASPTVFYMNCRDGSLARVDFADGETKV 253 (426)
T ss_dssp BSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC-CSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEE
T ss_pred cCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc-CCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEE
Confidence 12458999999978889999753 4699999999886533221 1111112222 677788886666642110
Q ss_pred -----ccccc-c----------eeeeeecCCCceEEEEeCCCCcEEEEeC------C----CCCCce---EEEccCCCEE
Q 018242 165 -----FQRRN-H----------ISVILSGDKTGRLMKYDPATKQVTVLLG------N----LSFPNG---VALSEDGNYI 215 (359)
Q Consensus 165 -----~~~~~-~----------~~~~~~~~~~g~v~~~d~~~~~~~~~~~------~----~~~p~g---ia~~~d~~~l 215 (359)
+.... . ...+......+.|+.+|..++....... . ...|.+ +++++|++++
T Consensus 254 ~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rl 333 (426)
T 3c75_H 254 TNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRI 333 (426)
T ss_dssp EECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEE
T ss_pred EeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEE
Confidence 00000 0 0000001123567777775544332210 0 112444 8999999999
Q ss_pred EEEecC---------CCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCC-EEEEEe-cCCCccccccccC-Ccccee
Q 018242 216 LLAETT---------SCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIH-SRRKGISKLVLSF-PWIGNV 283 (359)
Q Consensus 216 ~v~~~~---------~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~-~~~~~~~~~~~~~-~~~g~~ 283 (359)
|+++.. .+.|.++|....+.. ....++..|++|+++++|+ +|+.++ .++. +.++ ..++++
T Consensus 334 yVa~~~~~~gthk~~s~~VsVID~~T~kvv---~~I~vg~~P~gia~spDg~~~lyv~n~~s~~-----VsVID~~t~kv 405 (426)
T 3c75_H 334 YLLVDQRDEWKHKAASRFVVVLNAETGERI---NKIELGHEIDSINVSQDAEPLLYALSAGTQT-----LHIYDAATGEE 405 (426)
T ss_dssp EEEEEECCTTCTTSCEEEEEEEETTTCCEE---EEEEEEEEECEEEECCSSSCEEEEEETTTTE-----EEEEETTTCCE
T ss_pred EEEecccccccccCCCCEEEEEECCCCeEE---EEEECCCCcCeEEEccCCCEEEEEEcCCCCe-----EEEEECCCCCE
Confidence 999742 357999997654221 1112344699999999998 666555 4443 3333 456777
Q ss_pred eecC
Q 018242 284 LIKL 287 (359)
Q Consensus 284 ~~~~ 287 (359)
++++
T Consensus 406 v~tI 409 (426)
T 3c75_H 406 LRSV 409 (426)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7765
No 100
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.33 E-value=1.6e-10 Score=105.59 Aligned_cols=197 Identities=16% Similarity=0.130 Sum_probs=122.0
Q ss_pred CCCCCceEEEccC---CCeeEEecCC--------CEEEEEEcCCc--ceEEEeecCCCCCCCCCCcccccc-ccc-ccCC
Q 018242 32 GAIGPESLAFDAL---GEGPYTGVSD--------GRIIKWHQDQR--RWLHFARTSPNRDGCEGAYEYDHA-AKE-HICG 96 (359)
Q Consensus 32 ~~~~p~~i~~~~~---G~~l~~~~~~--------~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~ 96 (359)
+..+|.+|+++|+ +..+|++... .+|.+++.++. ...... .++ .+. ...+
T Consensus 71 g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~---------------~l~~~~~~~~~h 135 (354)
T 3a9g_A 71 GEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVK---------------TLIDGIPGAYIH 135 (354)
T ss_dssp TTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEE---------------EEEEEEECCSSC
T ss_pred CCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccE---------------EEEEcCCCCCCc
Confidence 3468999999997 4447776542 68999987654 111100 000 011 1224
Q ss_pred cceEEEEecCCCeEEEEeCC--------------CcEEEEeCCCC--------eEEEEeecCCCccccccceEEEeC-CC
Q 018242 97 RPLGLCFNKTNGDLYIADAY--------------FGLLKVGPEGG--------LATAVATQSEGIPFRFCNSLDIDQ-ST 153 (359)
Q Consensus 97 ~p~gi~~~~~~g~l~v~~~~--------------~~i~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~d~-~g 153 (359)
.+.+|++++ +|+||++... +.|+|+++++. ..+.+.. .+..|++|++|+ +|
T Consensus 136 ~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~-----G~rnp~Gla~d~~~g 209 (354)
T 3a9g_A 136 NGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSY-----GHRNPQGIDWHRASG 209 (354)
T ss_dssp CCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEE-----CCSCCCEEEECTTTC
T ss_pred CCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEE-----ccCCcceEEEeCCCC
Confidence 567899999 8899998521 25999998764 1122211 345799999999 78
Q ss_pred CEEEEEeCCCccccccceeeeeecCCCceEEEEeCCC--------------CcEEE--Ee-CCCCCCceEEEc-------
Q 018242 154 GIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPAT--------------KQVTV--LL-GNLSFPNGVALS------- 209 (359)
Q Consensus 154 ~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~--------------~~~~~--~~-~~~~~p~gia~~------- 209 (359)
+ ||+++.+... ...|.++.+.. +.... .. .....|.|+++.
T Consensus 210 ~-l~v~d~g~~~--------------~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~ 274 (354)
T 3a9g_A 210 V-MVATEHGPVG--------------HDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPG 274 (354)
T ss_dssp C-EEEEECCSSS--------------CCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGG
T ss_pred C-EEEEecCCCC--------------CcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcc
Confidence 8 9999876431 01222222210 00001 11 223468899994
Q ss_pred cCCCEEEEEecCCCEEEEEEcCCC-CCcceeEeec-CCCCCCceEECCCCCEEEEEec
Q 018242 210 EDGNYILLAETTSCRILRYWLKTS-KAGTIEIVAQ-LPGFPDNIKRSPRGGFWVGIHS 265 (359)
Q Consensus 210 ~d~~~l~v~~~~~~~i~~~~~~~~-~~~~~~~~~~-~~~~p~~i~~d~~G~lwv~~~~ 265 (359)
.+| .+|+++...++|++++++.. .....+.+.. ..+.|.++++++||.||+++..
T Consensus 275 ~~G-~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~~ 331 (354)
T 3a9g_A 275 LRG-WLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTSN 331 (354)
T ss_dssp GTT-EEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEECT
T ss_pred cCC-cEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEeC
Confidence 455 58999999999999998753 2222233332 3456899999999999999863
No 101
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.33 E-value=4.8e-10 Score=102.46 Aligned_cols=278 Identities=11% Similarity=-0.047 Sum_probs=149.1
Q ss_pred ceEEEccCCCeeEEecC------CCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeE
Q 018242 37 ESLAFDALGEGPYTGVS------DGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDL 110 (359)
Q Consensus 37 ~~i~~~~~G~~l~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l 110 (359)
.+++|+|||++|.++.. ++.|+.|+..+++.. ................+++++ ++.+
T Consensus 46 ~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~----------------~~~~~~~~~~~~~V~~~~~s~-d~~~ 108 (357)
T 4g56_B 46 GAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPN----------------ESLCTAGVQTEAGVTDVAWVS-EKGI 108 (357)
T ss_dssp EEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---C----------------GGGCSEEEECSSCEEEEEEET-TTEE
T ss_pred EEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcc----------------eeEecccCCCCCCEEEEEEcC-CCCE
Confidence 58999999997777665 567888876554100 000001111223356889999 7888
Q ss_pred EEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCC
Q 018242 111 YIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPAT 190 (359)
Q Consensus 111 ~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 190 (359)
+++...+.|..+|..+++...............+..++++|+|+ ..++- ...+.|..||..+
T Consensus 109 l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~sg-----------------s~dg~v~iwd~~~ 170 (357)
T 4g56_B 109 LVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGT-QAVSG-----------------GKDFSVKVWDLSQ 170 (357)
T ss_dssp EEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSS-EEEEE-----------------ETTSCEEEEETTT
T ss_pred EEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCC-EEEEE-----------------eCCCeEEEEECCC
Confidence 88876666888888766532111100001123577899999999 44441 2356788999987
Q ss_pred CcEEEEe-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCC-CEEEEEecCCC
Q 018242 191 KQVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRG-GFWVGIHSRRK 268 (359)
Q Consensus 191 ~~~~~~~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G-~lwv~~~~~~~ 268 (359)
++..... ........++++++++.++++...++.|..||+...+......+......+..+++.+++ +++++....+.
T Consensus 171 ~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~ 250 (357)
T 4g56_B 171 KAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGN 250 (357)
T ss_dssp TEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSC
T ss_pred CcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccc
Confidence 7665433 334456789999988767788888899999997654321111111122334568888764 56654444443
Q ss_pred ccccccccCC-ccceeeecCCccceeeeeecccccCc--------ceEEEEECCCCCEEEEEEccCCceeeceEEEEEe-
Q 018242 269 GISKLVLSFP-WIGNVLIKLPIDIVKIHSSLVKLSGN--------GGMAMRISEQGNVLEILEEIGRKMWRSISEVEEK- 338 (359)
Q Consensus 269 ~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~- 338 (359)
+..++ ..++.+..+......+..+.+..... ...+..+|.+...+.....+ ...+..+...
T Consensus 251 -----i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H----~~~V~~vafsP 321 (357)
T 4g56_B 251 -----VSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSH----RDFVTGVAWSP 321 (357)
T ss_dssp -----EEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCC----SSCEEEEEECS
T ss_pred -----eeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCC----CCCEEEEEEeC
Confidence 44444 35555555554444444444432221 01233334332222221111 1244555542
Q ss_pred -CCEEEEecCCCCeEEEEcCC
Q 018242 339 -DGNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 339 -~g~l~ig~~~~~~l~~~~~~ 358 (359)
+++++++.-.+..|.+.+++
T Consensus 322 ~d~~~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 322 LDHSKFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp SSTTEEEEEETTSCEEEEECC
T ss_pred CCCCEEEEEcCCCeEEEEECC
Confidence 45555544346678887765
No 102
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.33 E-value=4.4e-10 Score=100.85 Aligned_cols=186 Identities=12% Similarity=0.080 Sum_probs=119.0
Q ss_pred CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCCCcEEEEe
Q 018242 44 LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYFGLLKVG 123 (359)
Q Consensus 44 ~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~~~i~~~~ 123 (359)
+|+ +|+++.+++|+++|++ ++...... ........+++++ ++++|+++..++|++++
T Consensus 107 ~~~-l~v~t~~~~l~~~d~~-g~~~~~~~--------------------~~~~~~~~~~~~~-~g~l~vgt~~~~l~~~d 163 (330)
T 3hxj_A 107 EDI-LYVTSMDGHLYAINTD-GTEKWRFK--------------------TKKAIYATPIVSE-DGTIYVGSNDNYLYAIN 163 (330)
T ss_dssp TTE-EEEECTTSEEEEECTT-SCEEEEEE--------------------CSSCCCSCCEECT-TSCEEEECTTSEEEEEC
T ss_pred CCE-EEEEecCCEEEEEcCC-CCEEEEEc--------------------CCCceeeeeEEcC-CCEEEEEcCCCEEEEEC
Confidence 565 8888888889999987 43222110 0111123456676 88999998767899999
Q ss_pred CCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEE-EeCCCCC
Q 018242 124 PEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTV-LLGNLSF 202 (359)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~-~~~~~~~ 202 (359)
++ ++....... +......++++++|+ +|++. ++|+++|++ ++... .......
T Consensus 164 ~~-g~~~~~~~~----~~~~~~~~~~d~~g~-l~v~t--------------------~~l~~~d~~-g~~~~~~~~~~~~ 216 (330)
T 3hxj_A 164 PD-GTEKWRFKT----NDAITSAASIGKDGT-IYFGS--------------------DKVYAINPD-GTEKWNFYAGYWT 216 (330)
T ss_dssp TT-SCEEEEEEC----SSCCCSCCEECTTCC-EEEES--------------------SSEEEECTT-SCEEEEECCSSCC
T ss_pred CC-CCEeEEEec----CCCceeeeEEcCCCE-EEEEe--------------------CEEEEECCC-CcEEEEEccCCcc
Confidence 98 554322221 123456788999999 99992 579999954 44433 2223344
Q ss_pred CceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCCCccccccccCCccce
Q 018242 203 PNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFPWIGN 282 (359)
Q Consensus 203 p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~g~ 282 (359)
...++++++++ +|++. .++.|++++.++. ....+......+..+.+|++|+||+++..++ +.+++++|+
T Consensus 217 ~~~~~~~~~g~-l~v~t-~~~gl~~~~~~g~---~~~~~~~~~~~~~~~~~~~~g~l~v~t~~gg------l~~~d~~g~ 285 (330)
T 3hxj_A 217 VTRPAISEDGT-IYVTS-LDGHLYAINPDGT---EKWRFKTGKRIESSPVIGNTDTIYFGSYDGH------LYAINPDGT 285 (330)
T ss_dssp CSCCEECTTSC-EEEEE-TTTEEEEECTTSC---EEEEEECSSCCCSCCEECTTSCEEEECTTCE------EEEECTTSC
T ss_pred eeceEECCCCe-EEEEc-CCCeEEEECCCCC---EeEEeeCCCCccccceEcCCCeEEEecCCCC------EEEECCCCc
Confidence 67788888875 67664 4678999964322 1112222233456788898999999997655 677777787
Q ss_pred eeecCCcc
Q 018242 283 VLIKLPID 290 (359)
Q Consensus 283 ~~~~~~~~ 290 (359)
.+.....+
T Consensus 286 ~~~~~~~~ 293 (330)
T 3hxj_A 286 EKWNFETG 293 (330)
T ss_dssp EEEEEECS
T ss_pred EEEEEEcC
Confidence 76655443
No 103
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.33 E-value=5.3e-10 Score=104.03 Aligned_cols=114 Identities=11% Similarity=-0.097 Sum_probs=78.0
Q ss_pred cCCCeeEEecCC-----CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC--
Q 018242 43 ALGEGPYTGVSD-----GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA-- 115 (359)
Q Consensus 43 ~~G~~l~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~-- 115 (359)
++++.+|++... +.|..+|+.+.+... . ......| +++++++++.+|+++.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~--------------------~-I~vG~~P-gia~SpDgk~lyVan~~~ 139 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILG--------------------M-TDGGFLP-HPVAAEDGSFFAQASTVF 139 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEE--------------------E-EEECSSC-EEEECTTSSCEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEE--------------------E-EECCCCC-ceEECCCCCEEEEEeccc
Confidence 577778887663 589999999875432 1 1233458 9999998888999974
Q ss_pred --------CCcEEEEeCCCCeEEEEeecC-CC--ccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEE
Q 018242 116 --------YFGLLKVGPEGGLATAVATQS-EG--IPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLM 184 (359)
Q Consensus 116 --------~~~i~~~~~~~~~~~~~~~~~-~~--~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 184 (359)
.+.|..+|..++++....... .. .....|+++++++||+++|+++.. ..+.|.
T Consensus 140 ~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----------------~~~~Vs 203 (426)
T 3c75_H 140 ERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----------------PAPAVG 203 (426)
T ss_dssp EETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----------------SSCEEE
T ss_pred cccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----------------CCCeEE
Confidence 235999999988764322211 00 012468899999999999999532 124577
Q ss_pred EEeCCCCcEE
Q 018242 185 KYDPATKQVT 194 (359)
Q Consensus 185 ~~d~~~~~~~ 194 (359)
.+|..++++.
T Consensus 204 VID~~t~kvv 213 (426)
T 3c75_H 204 VVDLEGKTFD 213 (426)
T ss_dssp EEETTTTEEE
T ss_pred EEECCCCeEE
Confidence 7777766543
No 104
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.33 E-value=5.1e-11 Score=108.85 Aligned_cols=200 Identities=15% Similarity=0.140 Sum_probs=121.6
Q ss_pred CCCCceEEEccC---CCeeEEecCC------CEEEEEEcCCcceEEEeecCCCCCCCCCCccccccc-cc---ccCCcce
Q 018242 33 AIGPESLAFDAL---GEGPYTGVSD------GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAA-KE---HICGRPL 99 (359)
Q Consensus 33 ~~~p~~i~~~~~---G~~l~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~p~ 99 (359)
..+|.+|+++++ +..+|++... ++|.+++.+++.+..... ++. +. ...+.+.
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~---------------l~~~~p~~~~~~h~~~ 138 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRV---------------VLDGIPARPHGLHSGG 138 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEE---------------EEEEECCCTTCCCCCC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEE---------------EEEeCCCCCCCCcCCc
Confidence 568999999998 4447776542 689999987542211100 000 11 1224577
Q ss_pred EEEEecCCCeEEEEeCC--------------CcEEEEeCCCC-------------eEEEEeecCCCccccccceEEEeC-
Q 018242 100 GLCFNKTNGDLYIADAY--------------FGLLKVGPEGG-------------LATAVATQSEGIPFRFCNSLDIDQ- 151 (359)
Q Consensus 100 gi~~~~~~g~l~v~~~~--------------~~i~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~d~- 151 (359)
+|++++ +|+||+++.. +.|+|+++++. ..+.+. ..+..|+++++|+
T Consensus 139 ~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a-----~G~rnp~g~a~d~~ 212 (352)
T 2ism_A 139 RIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYS-----LGHRNPQGLAWHPK 212 (352)
T ss_dssp CEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEE-----ECCSEECCCEECTT
T ss_pred eEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEE-----EcCCCcccEEEECC
Confidence 999999 8899998631 35999998752 111111 1245799999999
Q ss_pred CCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCC--------------CcEE--EEeCCCCCCceEEEccCCCEE
Q 018242 152 STGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPAT--------------KQVT--VLLGNLSFPNGVALSEDGNYI 215 (359)
Q Consensus 152 ~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~--------------~~~~--~~~~~~~~p~gia~~~d~~~l 215 (359)
+|+ ||+++.+....+. .....|.++.+.. +... ........|.|+++. +| .+
T Consensus 213 ~g~-l~v~d~g~~~~~~---------~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~~-~G-~l 280 (352)
T 2ism_A 213 TGE-LFSSEHGPSGEQG---------YGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAFF-RG-DL 280 (352)
T ss_dssp TCC-EEEEEECC---------------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEEE-TT-EE
T ss_pred CCC-EEEEEcCCCCCCC---------CCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEEE-CC-EE
Confidence 788 9999876432000 0001233333211 0000 011223468899994 55 48
Q ss_pred EEEecCCCEEEEEEcCCCCC----cceeEeecCCCCCCceEECCCCCEEEEEec
Q 018242 216 LLAETTSCRILRYWLKTSKA----GTIEIVAQLPGFPDNIKRSPRGGFWVGIHS 265 (359)
Q Consensus 216 ~v~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~ 265 (359)
|+++...++|++++++.... ...+.+....+.|.++++++||.||+++..
T Consensus 281 ~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~~ 334 (352)
T 2ism_A 281 YVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTSN 334 (352)
T ss_dssp EEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEECS
T ss_pred EEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEeC
Confidence 99999999999999865431 112333332356899999999999999875
No 105
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.31 E-value=5.9e-09 Score=95.61 Aligned_cols=200 Identities=14% Similarity=0.097 Sum_probs=131.1
Q ss_pred eCCCCCCceEEEccCC-CeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCC
Q 018242 30 IEGAIGPESLAFDALG-EGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNG 108 (359)
Q Consensus 30 ~~~~~~p~~i~~~~~G-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g 108 (359)
.+--..-.+++++++| ++++++..++.|..||..+.+..... ...........++++++++
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~------------------~~~~h~~~v~~~~~~~~~~ 131 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFI------------------QGMGPGDAITGMKFNQFNT 131 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEE------------------CCCSTTCBEEEEEEETTEE
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceee------------------ecCCcCCceeEEEeCCCCC
Confidence 3333566799999999 87888999999999999876433221 1112334567899998444
Q ss_pred e-EEEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEe
Q 018242 109 D-LYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYD 187 (359)
Q Consensus 109 ~-l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 187 (359)
+ ++.+...+.|..+|..+.....+.... .....+..+++++++++++.+ ...+.|..+|
T Consensus 132 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~------------------~~d~~i~i~d 191 (383)
T 3ei3_B 132 NQLFVSSIRGATTLRDFSGSVIQVFAKTD--SWDYWYCCVDVSVSRQMLATG------------------DSTGRLLLLG 191 (383)
T ss_dssp EEEEEEETTTEEEEEETTSCEEEEEECCC--CSSCCEEEEEEETTTTEEEEE------------------ETTSEEEEEE
T ss_pred CEEEEEeCCCEEEEEECCCCceEEEeccC--CCCCCeEEEEECCCCCEEEEE------------------CCCCCEEEEE
Confidence 4 444554556888999876655443211 112357789999999944444 2356899999
Q ss_pred CCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCC-cceeEeecCCCCCCceEECC-CCCEEEEEec
Q 018242 188 PATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKA-GTIEIVAQLPGFPDNIKRSP-RGGFWVGIHS 265 (359)
Q Consensus 188 ~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~p~~i~~d~-~G~lwv~~~~ 265 (359)
.++.....+.........++++|+++.++++...++.|..||+..... ...............+++++ +|++.++...
T Consensus 192 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~ 271 (383)
T 3ei3_B 192 LDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQ 271 (383)
T ss_dssp TTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEES
T ss_pred CCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcC
Confidence 865555555555566789999999985667777888999999875321 11111112233456789999 9986665554
Q ss_pred CC
Q 018242 266 RR 267 (359)
Q Consensus 266 ~~ 267 (359)
.+
T Consensus 272 d~ 273 (383)
T 3ei3_B 272 RN 273 (383)
T ss_dssp SS
T ss_pred CC
Confidence 44
No 106
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.31 E-value=2.6e-08 Score=88.94 Aligned_cols=195 Identities=10% Similarity=0.075 Sum_probs=121.8
Q ss_pred CCCCceEEEccCCCeeEEecCCCEEEEEEcCCcceE-EEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEE
Q 018242 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWL-HFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLY 111 (359)
Q Consensus 33 ~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~ 111 (359)
-....+++++++|++++++. ++.|..||..+++.. .+. .+...........+++++++..++
T Consensus 51 ~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~----------------~~~~~~~~~~v~~~~~~~~~~~l~ 113 (337)
T 1gxr_A 51 GEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVS----------------QLDCLNRDNYIRSCKLLPDGCTLI 113 (337)
T ss_dssp SSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSE----------------EEECSCTTSBEEEEEECTTSSEEE
T ss_pred CCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeee----------------cccccCCCCcEEEEEEcCCCCEEE
Confidence 34667999999999777776 899999998765211 000 001112234467899999444566
Q ss_pred EEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCC
Q 018242 112 IADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATK 191 (359)
Q Consensus 112 v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 191 (359)
++...+.|..++.++++......... ....+..+++++++++++++ ...+.|..+|..++
T Consensus 114 ~~~~d~~i~~~d~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~------------------~~dg~v~~~d~~~~ 173 (337)
T 1gxr_A 114 VGGEASTLSIWDLAAPTPRIKAELTS--SAPACYALAISPDSKVCFSC------------------CSDGNIAVWDLHNQ 173 (337)
T ss_dssp EEESSSEEEEEECCCC--EEEEEEEC--SSSCEEEEEECTTSSEEEEE------------------ETTSCEEEEETTTT
T ss_pred EEcCCCcEEEEECCCCCcceeeeccc--CCCceEEEEECCCCCEEEEE------------------eCCCcEEEEeCCCC
Confidence 66655568899988776322211111 12346789999999955554 22467999998876
Q ss_pred cEEEEe-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCCC
Q 018242 192 QVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRK 268 (359)
Q Consensus 192 ~~~~~~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~ 268 (359)
+..... ........++++|+++.++. ...++.|..|++...+. ... .........++++++|++.++....+.
T Consensus 174 ~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~~~d~~~~~~--~~~-~~~~~~v~~~~~s~~~~~l~~~~~~~~ 247 (337)
T 1gxr_A 174 TLVRQFQGHTDGASCIDISNDGTKLWT-GGLDNTVRSWDLREGRQ--LQQ-HDFTSQIFSLGYCPTGEWLAVGMESSN 247 (337)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEE-EETTSEEEEEETTTTEE--EEE-EECSSCEEEEEECTTSSEEEEEETTSC
T ss_pred ceeeeeecccCceEEEEECCCCCEEEE-EecCCcEEEEECCCCce--Eee-ecCCCceEEEEECCCCCEEEEEcCCCc
Confidence 654433 33445678999999985554 45678999999865421 111 123334567899999986665554443
No 107
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.31 E-value=2.8e-10 Score=98.89 Aligned_cols=167 Identities=13% Similarity=0.046 Sum_probs=116.0
Q ss_pred CCEEEEeeCCCCCCceEEEccCCCeeEEec-CCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEE
Q 018242 23 QGVVQYQIEGAIGPESLAFDALGEGPYTGV-SDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGL 101 (359)
Q Consensus 23 ~~~~~~~~~~~~~p~~i~~~~~G~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi 101 (359)
+...+++++....+++++++ |+.+|+.+ .++.+..+|+.+.+... .+. .. .|.|.
T Consensus 55 ~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~--------------------~i~-~g-~~~g~ 110 (266)
T 2iwa_A 55 KVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIK--------------------NFT-HQ-MKDGW 110 (266)
T ss_dssp CEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEE--------------------EEE-CC-SSSCC
T ss_pred CEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEE--------------------EEE-CC-CCCeE
Confidence 33446777766778888887 33477655 45899999998764321 111 11 23344
Q ss_pred EEecCCCeEEEEeCCCcEEEEeCCCCeEEEEeec-CCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCC
Q 018242 102 CFNKTNGDLYIADAYFGLLKVGPEGGLATAVATQ-SEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKT 180 (359)
Q Consensus 102 ~~~~~~g~l~v~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~ 180 (359)
.+.++++.+|+++..+.|..+|+++.++...... ..+.+...++.+.+. +|+ +|++... .
T Consensus 111 glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~-lyvn~~~-----------------~ 171 (266)
T 2iwa_A 111 GLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE-VWANIWQ-----------------T 171 (266)
T ss_dssp EEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETT-----------------S
T ss_pred EEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE-EEEecCC-----------------C
Confidence 4555578899998656799999998775433221 123345568888888 776 9998543 3
Q ss_pred ceEEEEeCCCCcEEEEe-C-C------------CCCCceEEEccCCCEEEEEecCCCEEEEEEcCC
Q 018242 181 GRLMKYDPATKQVTVLL-G-N------------LSFPNGVALSEDGNYILLAETTSCRILRYWLKT 232 (359)
Q Consensus 181 g~v~~~d~~~~~~~~~~-~-~------------~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~ 232 (359)
+.|.++|+.++++.... - + ...|+||+++++++.+|+++...+.++++++..
T Consensus 172 ~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 172 DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 57999999998775432 1 1 135799999999999999999999999998754
No 108
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.30 E-value=4.1e-09 Score=94.23 Aligned_cols=189 Identities=8% Similarity=-0.040 Sum_probs=126.1
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEe
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIAD 114 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~ 114 (359)
...+++++++|+.++++..++.|..||..+.+..... .+.........+++++++..++++.
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~------------------~~~~~~~~i~~~~~~~~~~~l~~~~ 160 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKA------------------ELTSSAPACYALAISPDSKVCFSCC 160 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEE------------------EEECSSSCEEEEEECTTSSEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceee------------------ecccCCCceEEEEECCCCCEEEEEe
Confidence 4558899999998888888999999999876422211 1222233457889999555566666
Q ss_pred CCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEE
Q 018242 115 AYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVT 194 (359)
Q Consensus 115 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 194 (359)
..+.|..++.++++....... ....+..++++++|++++++ ...+.|..||..+++..
T Consensus 161 ~dg~v~~~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~------------------~~dg~i~~~d~~~~~~~ 218 (337)
T 1gxr_A 161 SDGNIAVWDLHNQTLVRQFQG----HTDGASCIDISNDGTKLWTG------------------GLDNTVRSWDLREGRQL 218 (337)
T ss_dssp TTSCEEEEETTTTEEEEEECC----CSSCEEEEEECTTSSEEEEE------------------ETTSEEEEEETTTTEEE
T ss_pred CCCcEEEEeCCCCceeeeeec----ccCceEEEEECCCCCEEEEE------------------ecCCcEEEEECCCCceE
Confidence 666799999988765432221 12356789999999945544 23567999998877655
Q ss_pred EEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCC
Q 018242 195 VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 195 ~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
...........++++|+++.++++ ..++.|..|++.... ...+.........++++++|++.++....+
T Consensus 219 ~~~~~~~~v~~~~~s~~~~~l~~~-~~~~~i~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 287 (337)
T 1gxr_A 219 QQHDFTSQIFSLGYCPTGEWLAVG-MESSNVEVLHVNKPD---KYQLHLHESCVLSLKFAYCGKWFVSTGKDN 287 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTSSC---EEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eeecCCCceEEEEECCCCCEEEEE-cCCCcEEEEECCCCC---eEEEcCCccceeEEEECCCCCEEEEecCCC
Confidence 444444456789999999865555 566789999986542 122222233456789999998766555444
No 109
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.29 E-value=1.2e-10 Score=109.85 Aligned_cols=185 Identities=11% Similarity=0.094 Sum_probs=116.0
Q ss_pred CCEEEEeeCCCCCCceEEEccCCCeeEEecCCC-EEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEE
Q 018242 23 QGVVQYQIEGAIGPESLAFDALGEGPYTGVSDG-RIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGL 101 (359)
Q Consensus 23 ~~~~~~~~~~~~~p~~i~~~~~G~~l~~~~~~~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi 101 (359)
..+.+++ .++..|++|+++++|+ +|++...+ +|+++++.++....+...++. +......+.+.||
T Consensus 17 f~~~~~a-~~l~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~------------~~~~~g~~Gllgi 82 (454)
T 1cru_A 17 FDKKVIL-SNLNKPHALLWGPDNQ-IWLTERATGKILRVNPESGSVKTVFQVPEI------------VNDADGQNGLLGF 82 (454)
T ss_dssp SCEEEEE-CCCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTC------------CCCTTSSCSEEEE
T ss_pred eEEEEEE-CCCCCceEEEEcCCCc-EEEEEcCCCEEEEEECCCCcEeEEecCCcc------------ccccCCCCceeEE
Confidence 3444555 4589999999999999 77766664 799998765544444311100 0000123457899
Q ss_pred EEecC---CCeEEEEeCC-------------CcEEEEeCCCC--eE---EEEeecCCCccccccceEEEeCCCCEEEEEe
Q 018242 102 CFNKT---NGDLYIADAY-------------FGLLKVGPEGG--LA---TAVATQSEGIPFRFCNSLDIDQSTGIIYFTD 160 (359)
Q Consensus 102 ~~~~~---~g~l~v~~~~-------------~~i~~~~~~~~--~~---~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d 160 (359)
+++|+ ++.||++... ..|.|++.+.+ ++ +.+....+....+.+++|++++||+ |||+.
T Consensus 83 a~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~ 161 (454)
T 1cru_A 83 AFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTI 161 (454)
T ss_dssp EECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEE
T ss_pred EECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEE
Confidence 99987 8999998642 35888876432 22 2333222222345789999999999 99995
Q ss_pred CCCcccc-c---cce-----------eeeeecCCCceEEEEeCCCC-----------cEEEEeCCCCCCceEEEccCCCE
Q 018242 161 SSSQFQR-R---NHI-----------SVILSGDKTGRLMKYDPATK-----------QVTVLLGNLSFPNGVALSEDGNY 214 (359)
Q Consensus 161 ~~~~~~~-~---~~~-----------~~~~~~~~~g~v~~~d~~~~-----------~~~~~~~~~~~p~gia~~~d~~~ 214 (359)
....... . ... .........|+|+++++++. ..+.+..+...|.+++|+++++
T Consensus 162 Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~- 240 (454)
T 1cru_A 162 GDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGK- 240 (454)
T ss_dssp CCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSC-
T ss_pred CCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCC-
Confidence 3211000 0 000 00001123588999999854 3345666778899999999865
Q ss_pred EEEEecCCC
Q 018242 215 ILLAETTSC 223 (359)
Q Consensus 215 l~v~~~~~~ 223 (359)
||+++...+
T Consensus 241 L~~~d~g~~ 249 (454)
T 1cru_A 241 LLQSEQGPN 249 (454)
T ss_dssp EEEEEECSS
T ss_pred EEEEecCCC
Confidence 999987654
No 110
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.29 E-value=4.9e-10 Score=100.41 Aligned_cols=195 Identities=13% Similarity=0.024 Sum_probs=122.3
Q ss_pred CCceEEEccCCCeeEEec------------CCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEE
Q 018242 35 GPESLAFDALGEGPYTGV------------SDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLC 102 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 102 (359)
.|.+++++++|+.+|++. .++.|..||..+++.... + .....+.+++
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~--------------------~-~~~~~~~~~~ 141 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKA--------------------F-EAPRQITMLA 141 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEE--------------------E-ECCSSCCCEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEE--------------------E-eCCCCcceeE
Confidence 789999999998788875 458999999987643321 1 1123477899
Q ss_pred EecCCCeEEEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeec-----
Q 018242 103 FNKTNGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSG----- 177 (359)
Q Consensus 103 ~~~~~g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~----- 177 (359)
+++++..+|++ .+.|..+|..+++......... .+..+.++++|+++|++..........+.......
T Consensus 142 ~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (337)
T 1pby_B 142 WARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQS-----WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADP 214 (337)
T ss_dssp ECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTT-----TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSG
T ss_pred ECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccc-----cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccc
Confidence 99955568887 3569999999887653322111 11234678888867776432110000000000000
Q ss_pred -CCCceEEEEeCCCCcEEEE--eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEEC
Q 018242 178 -DKTGRLMKYDPATKQVTVL--LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRS 254 (359)
Q Consensus 178 -~~~g~v~~~d~~~~~~~~~--~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d 254 (359)
.....|+.+|+.+++.... ......|.+++++||++.+|++ ++.|++|++...+ .......+..|.+++++
T Consensus 215 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~---~~~~~~~~~~~~~~~~s 288 (337)
T 1pby_B 215 TAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA---YNVLESFDLEKNA---SIKRVPLPHSYYSVNVS 288 (337)
T ss_dssp GGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE---ESEEEEEETTTTE---EEEEEECSSCCCEEEEC
T ss_pred cccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe---CCeEEEEECCCCc---CcceecCCCceeeEEEC
Confidence 0011588999988876532 1223467889999999998888 4799999975432 11122234568899999
Q ss_pred CCCC-EEEEE
Q 018242 255 PRGG-FWVGI 263 (359)
Q Consensus 255 ~~G~-lwv~~ 263 (359)
++|+ +|++.
T Consensus 289 ~dg~~l~~~~ 298 (337)
T 1pby_B 289 TDGSTVWLGG 298 (337)
T ss_dssp TTSCEEEEES
T ss_pred CCCCEEEEEc
Confidence 9997 66653
No 111
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.29 E-value=8.1e-09 Score=93.81 Aligned_cols=223 Identities=7% Similarity=-0.037 Sum_probs=134.4
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
..-.+++++++|++++++..++.|..||..++++.... .+.........+++++++..++.+
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~------------------~~~~h~~~v~~~~~~~~~~~l~~~ 70 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVH------------------ELKEHNGQVTGVDWAPDSNRIVTC 70 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEE------------------EEECCSSCEEEEEEETTTTEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeee------------------eecCCCCcccEEEEeCCCCEEEEE
Confidence 35679999999998888888999999999877432221 222233456789999944445555
Q ss_pred eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCc-
Q 018242 114 DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQ- 192 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~- 192 (359)
...+.|..++.++++......... ....+..+.++++|++++++. ..+.|..+|.+++.
T Consensus 71 ~~dg~i~vwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~------------------~d~~v~i~d~~~~~~ 130 (372)
T 1k8k_C 71 GTDRNAYVWTLKGRTWKPTLVILR--INRAARCVRWAPNEKKFAVGS------------------GSRVISICYFEQEND 130 (372)
T ss_dssp ETTSCEEEEEEETTEEEEEEECCC--CSSCEEEEEECTTSSEEEEEE------------------TTSSEEEEEEETTTT
T ss_pred cCCCeEEEEECCCCeeeeeEEeec--CCCceeEEEECCCCCEEEEEe------------------CCCEEEEEEecCCCc
Confidence 555568888988776443322111 123577899999999555542 23456666655443
Q ss_pred ---EEEEe-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCC-------------cceeEeec---CCCCCCceE
Q 018242 193 ---VTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKA-------------GTIEIVAQ---LPGFPDNIK 252 (359)
Q Consensus 193 ---~~~~~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~-------------~~~~~~~~---~~~~p~~i~ 252 (359)
..... ........++++|+++. +++...++.|..|++..... ...+.... ..+....++
T Consensus 131 ~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 209 (372)
T 1k8k_C 131 WWVCKHIKKPIRSTVLSLDWHPNSVL-LAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVC 209 (372)
T ss_dssp EEEEEEECTTCCSCEEEEEECTTSSE-EEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEE
T ss_pred ceeeeeeecccCCCeeEEEEcCCCCE-EEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEE
Confidence 22222 22345678999999985 45555678999999642110 01111111 223345689
Q ss_pred ECCCCCEEEEEecCCCccccccccCCc-cceeeecCCccceeeeeeccc
Q 018242 253 RSPRGGFWVGIHSRRKGISKLVLSFPW-IGNVLIKLPIDIVKIHSSLVK 300 (359)
Q Consensus 253 ~d~~G~lwv~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 300 (359)
++++|++.++....+. +..++. .++.+..+..+...+..+.+.
T Consensus 210 ~~~~~~~l~~~~~d~~-----i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 253 (372)
T 1k8k_C 210 FSANGSRVAWVSHDST-----VCLADADKKMAVATLASETLPLLAVTFI 253 (372)
T ss_dssp ECSSSSEEEEEETTTE-----EEEEEGGGTTEEEEEECSSCCEEEEEEE
T ss_pred ECCCCCEEEEEeCCCE-----EEEEECCCCceeEEEccCCCCeEEEEEe
Confidence 9999976665555443 555553 566666555443344444443
No 112
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.28 E-value=8.2e-10 Score=99.55 Aligned_cols=161 Identities=13% Similarity=0.094 Sum_probs=105.5
Q ss_pred EEEEecCCCeEEEEeCC-CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecC
Q 018242 100 GLCFNKTNGDLYIADAY-FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGD 178 (359)
Q Consensus 100 gi~~~~~~g~l~v~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~ 178 (359)
|+++.+ ++++|++... +.|.++|.++++....... . ....+..++++++|+++|++...
T Consensus 4 g~~~~~-~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~-~--~~~~~~~~~~s~dg~~~~v~~~~---------------- 63 (349)
T 1jmx_B 4 GPALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSCVM-P--DKFGPGTAMMAPDNRTAYVLNNH---------------- 63 (349)
T ss_dssp CCCCCT-TCEEEEEEETTTEEEEEETTTTEEEEEEEC-S--SCCSSCEEEECTTSSEEEEEETT----------------
T ss_pred cccccC-CCEEEEEeCCCCeEEEEECCCCcEEEEEec-C--CCCCCceeEECCCCCEEEEEeCC----------------
Confidence 445555 7888887544 4699999998876433221 1 11247789999999878888432
Q ss_pred CCceEEEEeCCCCcEEEEeCC-------CCCCceEEEccCCCEEEEEecC-----------CCEEEEEEcCCCCCcceeE
Q 018242 179 KTGRLMKYDPATKQVTVLLGN-------LSFPNGVALSEDGNYILLAETT-----------SCRILRYWLKTSKAGTIEI 240 (359)
Q Consensus 179 ~~g~v~~~d~~~~~~~~~~~~-------~~~p~gia~~~d~~~l~v~~~~-----------~~~i~~~~~~~~~~~~~~~ 240 (359)
.+.|+.+|+++++....... ...|.+++++|||+.+|++... .+.|++|++...+......
T Consensus 64 -~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 142 (349)
T 1jmx_B 64 -YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVR 142 (349)
T ss_dssp -TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSE
T ss_pred -CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceee
Confidence 45799999988766533221 2337899999999999998854 5799999986532222111
Q ss_pred eecCCCCCCceEECCCCCEEEEEecCCCccccccccCC-ccceeeecCCc
Q 018242 241 VAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFP-WIGNVLIKLPI 289 (359)
Q Consensus 241 ~~~~~~~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~-~~g~~~~~~~~ 289 (359)
....+..+.+++++++|++|++... +..++ ..++....++.
T Consensus 143 ~~~~~~~~~~~~~s~dg~l~~~~~~--------i~~~d~~~~~~~~~~~~ 184 (349)
T 1jmx_B 143 TFPMPRQVYLMRAADDGSLYVAGPD--------IYKMDVKTGKYTVALPL 184 (349)
T ss_dssp EEECCSSCCCEEECTTSCEEEESSS--------EEEECTTTCCEEEEECS
T ss_pred eccCCCcccceeECCCCcEEEccCc--------EEEEeCCCCceeccccc
Confidence 1122334678889999998885321 44444 46666655543
No 113
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.27 E-value=7.9e-09 Score=92.88 Aligned_cols=189 Identities=15% Similarity=0.119 Sum_probs=122.8
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEe
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIAD 114 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~ 114 (359)
.-.++++.+++.++.++..++.|..||..+++... .+.........++++|++..+..+.
T Consensus 82 ~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~--------------------~~~~~~~~~~~~~~spdg~~l~~g~ 141 (321)
T 3ow8_A 82 GVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIK--------------------SIDAGPVDAWTLAFSPDSQYLATGT 141 (321)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE--------------------EEECCTTCCCCEEECTTSSEEEEEC
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEE--------------------EEeCCCccEEEEEECCCCCEEEEEc
Confidence 34578899999978888999999999998764221 1112223345788999444444444
Q ss_pred CCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEE
Q 018242 115 AYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVT 194 (359)
Q Consensus 115 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 194 (359)
..+.+..++.++++....... ....+..++++|+|++|..+ ...+.|..||..+++..
T Consensus 142 ~dg~v~i~~~~~~~~~~~~~~----~~~~v~~~~~spdg~~lasg------------------~~dg~i~iwd~~~~~~~ 199 (321)
T 3ow8_A 142 HVGKVNIFGVESGKKEYSLDT----RGKFILSIAYSPDGKYLASG------------------AIDGIINIFDIATGKLL 199 (321)
T ss_dssp TTSEEEEEETTTCSEEEEEEC----SSSCEEEEEECTTSSEEEEE------------------ETTSCEEEEETTTTEEE
T ss_pred CCCcEEEEEcCCCceeEEecC----CCceEEEEEECCCCCEEEEE------------------cCCCeEEEEECCCCcEE
Confidence 445588889887765432221 12356789999999944433 23567999998877655
Q ss_pred EEe-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCCC
Q 018242 195 VLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRK 268 (359)
Q Consensus 195 ~~~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~ 268 (359)
... ........++++|+++ ++++...++.|..|++..... ...+.........+++.++|.+.++....+.
T Consensus 200 ~~~~~h~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~~~~--~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~ 271 (321)
T 3ow8_A 200 HTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHANL--AGTLSGHASWVLNVAFCPDDTHFVSSSSDKS 271 (321)
T ss_dssp EEECCCSSCCCEEEECTTSC-EEEEECTTSCEEEEETTTCCE--EEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEcccCCceeEEEEcCCCC-EEEEEcCCCeEEEEECCCcce--eEEEcCCCCceEEEEECCCCCEEEEEeCCCc
Confidence 433 3334568999999998 556667788999999864321 1222222233456899999987776555443
No 114
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.27 E-value=3e-09 Score=97.36 Aligned_cols=233 Identities=11% Similarity=0.011 Sum_probs=134.0
Q ss_pred EEEEeeCCCCCCceEEEccCCCeeEEecC----------CCEEEEEEcCCcceE-EEeecCCCCCCCCCCcccccccccc
Q 018242 25 VVQYQIEGAIGPESLAFDALGEGPYTGVS----------DGRIIKWHQDQRRWL-HFARTSPNRDGCEGAYEYDHAAKEH 93 (359)
Q Consensus 25 ~~~~~~~~~~~p~~i~~~~~G~~l~~~~~----------~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (359)
..++..+ ..| .++++|||+.+|++.. ++.|..||..+.+.. .+...+ ....
T Consensus 44 ~~~i~~g--~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~---------------~~~~ 105 (361)
T 2oiz_A 44 LGMVPTA--FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPP---------------KRVQ 105 (361)
T ss_dssp EEEEECC--EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECT---------------TBCC
T ss_pred EEEecCC--CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCc---------------cccc
Confidence 3455555 478 9999999999998863 356999998876432 221110 0001
Q ss_pred cCCcceEEEEecCCCeEEEEeCC--CcEEEEeCCCCeEEEE-eecCCCc--ccccc----ceEEEeCCCCEEEEEeCC-C
Q 018242 94 ICGRPLGLCFNKTNGDLYIADAY--FGLLKVGPEGGLATAV-ATQSEGI--PFRFC----NSLDIDQSTGIIYFTDSS-S 163 (359)
Q Consensus 94 ~~~~p~gi~~~~~~g~l~v~~~~--~~i~~~~~~~~~~~~~-~~~~~~~--~~~~~----~~l~~d~~g~~l~v~d~~-~ 163 (359)
....|.++++++++..||+++.. +.|..+|.+++++... ... .+. ....| .-++..++|+.+|+.... .
T Consensus 106 ~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g 184 (361)
T 2oiz_A 106 GLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDG 184 (361)
T ss_dssp BCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTS
T ss_pred cCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCC
Confidence 22458899999977789998753 4599999998875432 221 110 00112 226677888855555321 0
Q ss_pred c----------ccccc-ce--------eeeeecCCCceEEEEeCCCCcEEEEeC----------CCCCCc---eEEEccC
Q 018242 164 Q----------FQRRN-HI--------SVILSGDKTGRLMKYDPATKQVTVLLG----------NLSFPN---GVALSED 211 (359)
Q Consensus 164 ~----------~~~~~-~~--------~~~~~~~~~g~v~~~d~~~~~~~~~~~----------~~~~p~---gia~~~d 211 (359)
. +.... .. .........+.|+.+|..++....+.. ....|. .+++++|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~d 264 (361)
T 2oiz_A 185 KVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRA 264 (361)
T ss_dssp SEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETT
T ss_pred cEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecC
Confidence 0 00000 00 000001123567778775443322110 011233 4899999
Q ss_pred CCEEEEEec----------CCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCC-EEEEEecCCCccccccccCC-c
Q 018242 212 GNYILLAET----------TSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIHSRRKGISKLVLSFP-W 279 (359)
Q Consensus 212 ~~~l~v~~~----------~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~-~ 279 (359)
++.+|++.. ..+.|++||++..+ .......+. |.+++++++|+ ||++. . +. +.+++ .
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~---~v~~i~~~~-p~~ia~spdg~~l~v~n-~-~~-----v~v~D~~ 333 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ---RVARIPGRD-ALSMTIDQQRNLMLTLD-G-GN-----VNVYDIS 333 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE---EEEEEECTT-CCEEEEETTTTEEEEEC-S-SC-----EEEEECS
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCc---EEEEEecCC-eeEEEECCCCCEEEEeC-C-Ce-----EEEEECC
Confidence 999999865 13589999975432 111123455 99999999997 55555 3 33 55554 5
Q ss_pred cc--eeeecC
Q 018242 280 IG--NVLIKL 287 (359)
Q Consensus 280 ~g--~~~~~~ 287 (359)
++ ++++++
T Consensus 334 t~~l~~~~~i 343 (361)
T 2oiz_A 334 QPEPKLLRTI 343 (361)
T ss_dssp SSSCEEEEEE
T ss_pred CCcceeeEEe
Confidence 77 777775
No 115
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.26 E-value=1.7e-08 Score=91.25 Aligned_cols=211 Identities=10% Similarity=0.098 Sum_probs=127.3
Q ss_pred CCCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE
Q 018242 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI 112 (359)
Q Consensus 33 ~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v 112 (359)
-..-.+++++++|++++++..++.|..||..+++... .+.........+++++++..++.
T Consensus 32 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~--------------------~~~~h~~~v~~~~~~~~~~~l~s 91 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLG--------------------TLDGHTGTIWSIDVDCFTKYCVT 91 (369)
T ss_dssp SSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEE--------------------EECCCSSCEEEEEECTTSSEEEE
T ss_pred eceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhh--------------------hhhhcCCcEEEEEEcCCCCEEEE
Confidence 3456789999999988888889999999988764322 22223344678999994444555
Q ss_pred EeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCc
Q 018242 113 ADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQ 192 (359)
Q Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 192 (359)
+...+.|..++..+++...... ....+..+.++++|++++++.... ....+.|..+|..++.
T Consensus 92 ~~~dg~i~iwd~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~-------------~~~~g~i~~~d~~~~~ 153 (369)
T 3zwl_B 92 GSADYSIKLWDVSNGQCVATWK-----SPVPVKRVEFSPCGNYFLAILDNV-------------MKNPGSINIYEIERDS 153 (369)
T ss_dssp EETTTEEEEEETTTCCEEEEEE-----CSSCEEEEEECTTSSEEEEEECCB-------------TTBCCEEEEEEEEECT
T ss_pred EeCCCeEEEEECCCCcEEEEee-----cCCCeEEEEEccCCCEEEEecCCc-------------cCCCCEEEEEEecCCc
Confidence 5555568899998877544332 123567899999999555542210 0112456666544321
Q ss_pred ------------EEEEeCC--CCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCC
Q 018242 193 ------------VTVLLGN--LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG 258 (359)
Q Consensus 193 ------------~~~~~~~--~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~ 258 (359)
...+... ......++++++++.+++ ...++.|..|++.... .....+.........++++++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~ 231 (369)
T 3zwl_B 154 ATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIA-GHKDGKISKYDVSNNY-EYVDSIDLHEKSISDMQFSPDLT 231 (369)
T ss_dssp TTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEE-EETTSEEEEEETTTTT-EEEEEEECCSSCEEEEEECTTSS
T ss_pred cceeecccccceeeeccCCcCccceeEEEEcCCCCEEEE-EcCCCEEEEEECCCCc-EeEEEEecCCCceeEEEECCCCC
Confidence 1111111 125678899999986555 4567899999986521 11222222233356789999998
Q ss_pred EEEEEecCCCccccccccCC-ccceeeecCC
Q 018242 259 FWVGIHSRRKGISKLVLSFP-WIGNVLIKLP 288 (359)
Q Consensus 259 lwv~~~~~~~~~~~~~~~~~-~~g~~~~~~~ 288 (359)
+.++....+. +..++ ..++.+..+.
T Consensus 232 ~l~~~~~d~~-----i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 232 YFITSSRDTN-----SFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EEEEEETTSE-----EEEEETTTCCEEEEEE
T ss_pred EEEEecCCce-----EEEEECCCCceeeeec
Confidence 6665554443 44444 3455554443
No 116
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.26 E-value=2.2e-08 Score=91.98 Aligned_cols=194 Identities=11% Similarity=-0.019 Sum_probs=112.7
Q ss_pred EEEeeCCCCCCceEEEccCCCeeEEecC----------CCEEEEEEcCCcceE-EEeecCCCCCCCCCCccccccccccc
Q 018242 26 VQYQIEGAIGPESLAFDALGEGPYTGVS----------DGRIIKWHQDQRRWL-HFARTSPNRDGCEGAYEYDHAAKEHI 94 (359)
Q Consensus 26 ~~~~~~~~~~p~~i~~~~~G~~l~~~~~----------~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (359)
.+++.+ ..| +++++|||+.+|++.. ++.|..+|+.+.+.. .+...... .. ..
T Consensus 61 ~~i~~g--~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~-------------~~-~~ 123 (373)
T 2mad_H 61 GHVNGG--FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAP-------------RF-DV 123 (373)
T ss_pred EEecCC--CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcc-------------cc-cc
Confidence 355555 478 9999999999998863 467899999875432 22100000 00 01
Q ss_pred CCcceEEEEecCCCeEEEEeCC--CcEEEEeCCCCeEEEE-eecCCCccccccceEEEeCCCCEEEEEeCCCccccccce
Q 018242 95 CGRPLGLCFNKTNGDLYIADAY--FGLLKVGPEGGLATAV-ATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHI 171 (359)
Q Consensus 95 ~~~p~gi~~~~~~g~l~v~~~~--~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~ 171 (359)
...|.+++++++++.||+++.. +.|..+| +++++... .. .+..+.+.+++++.|++..
T Consensus 124 g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~--------~~~~~~~~~~~~~~~~~~~---------- 184 (373)
T 2mad_H 124 GPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS--------SPTCYHIHPGAPSTFYLLC---------- 184 (373)
T ss_pred CCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC--------CCceEEEEeCCCceEEEEc----------
Confidence 2458899999978889998753 4699999 98876432 21 1122445566654777633
Q ss_pred eeeeecCCCceEEEEeCCCCcEEEEeC-----CCCCC--ceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEee--
Q 018242 172 SVILSGDKTGRLMKYDPATKQVTVLLG-----NLSFP--NGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA-- 242 (359)
Q Consensus 172 ~~~~~~~~~g~v~~~d~~~~~~~~~~~-----~~~~p--~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-- 242 (359)
..|.+..++. +++...... ....| ...++.++++.+|+.. ..+.++++|+..........+.
T Consensus 185 -------~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~ 255 (373)
T 2mad_H 185 -------AQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKAPIDAL 255 (373)
T ss_pred -------CCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEeeeeeec
Confidence 2456777777 554442111 11112 2234556666566665 4568999987643211111111
Q ss_pred -----cCCCCCCc---eEECCCC-CEEEEEe
Q 018242 243 -----QLPGFPDN---IKRSPRG-GFWVGIH 264 (359)
Q Consensus 243 -----~~~~~p~~---i~~d~~G-~lwv~~~ 264 (359)
...-.|.+ ++++++| ++|++..
T Consensus 256 ~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~ 286 (373)
T 2mad_H 256 SGGRKADTWRPGGWQQVAYLKSSDGIYLLTS 286 (373)
T ss_pred CCcccccceecCceEeEEECCCCCEEEEEec
Confidence 01113555 7889887 5898765
No 117
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.26 E-value=2.6e-09 Score=99.70 Aligned_cols=187 Identities=12% Similarity=0.053 Sum_probs=121.6
Q ss_pred CCceEEEccCCCeeEEecCC---CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEE
Q 018242 35 GPESLAFDALGEGPYTGVSD---GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLY 111 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~ 111 (359)
...+++++|||+.++....+ ..|+.||..+++...+. ........++++|++..|+
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~---------------------~~~~~~~~~~~spdg~~la 238 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA---------------------SFPRHNGAPAFSPDGSKLA 238 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEE---------------------CCSSCEEEEEECTTSSEEE
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEee---------------------cCCCcccCEEEcCCCCEEE
Confidence 44578999999866655544 48999999887554332 1223456889999444466
Q ss_pred EEeCC---CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeC
Q 018242 112 IADAY---FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDP 188 (359)
Q Consensus 112 v~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 188 (359)
++... ..|+.+|.++++...+... ......++++|+|++|+++... .....|+.+|.
T Consensus 239 ~~~~~~g~~~i~~~d~~~~~~~~l~~~-----~~~~~~~~~spdg~~l~~~s~~---------------~g~~~i~~~d~ 298 (415)
T 2hqs_A 239 FALSKTGSLNLYVMDLASGQIRQVTDG-----RSNNTEPTWFPDSQNLAFTSDQ---------------AGRPQVYKVNI 298 (415)
T ss_dssp EEECTTSSCEEEEEETTTCCEEECCCC-----SSCEEEEEECTTSSEEEEEECT---------------TSSCEEEEEET
T ss_pred EEEecCCCceEEEEECCCCCEEeCcCC-----CCcccceEECCCCCEEEEEECC---------------CCCcEEEEEEC
Confidence 45432 2499999998876544221 1245678999999967666321 11236999999
Q ss_pred CCCcEEEEeCCCCCCceEEEccCCCEEEEEecC--CCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCC-EEEEEec
Q 018242 189 ATKQVTVLLGNLSFPNGVALSEDGNYILLAETT--SCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIHS 265 (359)
Q Consensus 189 ~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~~ 265 (359)
++++.+.+.........++++|||+.++++... ...|+.|++.... ...+... .....++++++|+ |+++...
T Consensus 299 ~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~---~~~l~~~-~~~~~~~~spdg~~l~~~s~~ 374 (415)
T 2hqs_A 299 NGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG---VQVLSST-FLDETPSLAPNGTMVIYSSSQ 374 (415)
T ss_dssp TSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC---EEECCCS-SSCEEEEECTTSSEEEEEEEE
T ss_pred CCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC---EEEecCC-CCcCCeEEcCCCCEEEEEEcC
Confidence 887765544333445678999999988887765 3589999986542 2222221 2356689999998 4445544
Q ss_pred C
Q 018242 266 R 266 (359)
Q Consensus 266 ~ 266 (359)
.
T Consensus 375 ~ 375 (415)
T 2hqs_A 375 G 375 (415)
T ss_dssp T
T ss_pred C
Confidence 3
No 118
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.26 E-value=2.7e-08 Score=88.55 Aligned_cols=204 Identities=11% Similarity=0.068 Sum_probs=129.2
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
..-.+++++|+|++++++..++.|..|+..+++.... +.........+++++++..++.+
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~--------------------~~~h~~~v~~~~~~~~~~~l~s~ 83 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT--------------------ISGHKLGISDVAWSSDSNLLVSA 83 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE--------------------ECCCSSCEEEEEECTTSSEEEEE
T ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchh--------------------hccCCCceEEEEEcCCCCEEEEE
Confidence 4556899999999888889999999999877644321 22223346789999944445555
Q ss_pred eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcE
Q 018242 114 DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQV 193 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 193 (359)
...+.|..+|.++++....... ....+..+.++++++ +.++- ...+.|..||..+++.
T Consensus 84 ~~d~~i~vwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~-~l~s~-----------------~~d~~i~iwd~~~~~~ 141 (312)
T 4ery_A 84 SDDKTLKIWDVSSGKCLKTLKG----HSNYVFCCNFNPQSN-LIVSG-----------------SFDESVRIWDVKTGKC 141 (312)
T ss_dssp ETTSEEEEEETTTCCEEEEEEC----CSSCEEEEEECSSSS-EEEEE-----------------ETTSCEEEEETTTCCE
T ss_pred CCCCEEEEEECCCCcEEEEEcC----CCCCEEEEEEcCCCC-EEEEE-----------------eCCCcEEEEECCCCEE
Confidence 5555688899987764332221 123467789999999 44441 2356789999887665
Q ss_pred EEEe-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-CCCCCCceEECCCCCEEEEEecCCCccc
Q 018242 194 TVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGGFWVGIHSRRKGIS 271 (359)
Q Consensus 194 ~~~~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwv~~~~~~~~~~ 271 (359)
.... ........++++++++. +++...++.|..|++...+. ...+.. .......++++++|++.++....+.
T Consensus 142 ~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~--- 215 (312)
T 4ery_A 142 LKTLPAHSDPVSAVHFNRDGSL-IVSSSYDGLCRIWDTASGQC--LKTLIDDDNPPVSFVKFSPNGKYILAATLDNT--- 215 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTCCE--EEEECCSSCCCEEEEEECTTSSEEEEEETTTE---
T ss_pred EEEecCCCCcEEEEEEcCCCCE-EEEEeCCCcEEEEECCCCce--eeEEeccCCCceEEEEECCCCCEEEEEcCCCe---
Confidence 4333 33344578999999985 45556778999999764321 122222 1122345889999987665555443
Q ss_pred cccccCC-ccceeeecC
Q 018242 272 KLVLSFP-WIGNVLIKL 287 (359)
Q Consensus 272 ~~~~~~~-~~g~~~~~~ 287 (359)
+..++ ..++.+..+
T Consensus 216 --i~iwd~~~~~~~~~~ 230 (312)
T 4ery_A 216 --LKLWDYSKGKCLKTY 230 (312)
T ss_dssp --EEEEETTTTEEEEEE
T ss_pred --EEEEECCCCcEEEEE
Confidence 44444 345554443
No 119
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.25 E-value=6.3e-09 Score=96.15 Aligned_cols=275 Identities=9% Similarity=0.010 Sum_probs=159.5
Q ss_pred CCCEEEEeeCC-CCCCceEEE-----------c--cCCCeeEEec-CCCEEEEEEcCCc----ceEEEeecCCCCCCCCC
Q 018242 22 TQGVVQYQIEG-AIGPESLAF-----------D--ALGEGPYTGV-SDGRIIKWHQDQR----RWLHFARTSPNRDGCEG 82 (359)
Q Consensus 22 ~~~~~~~~~~~-~~~p~~i~~-----------~--~~G~~l~~~~-~~~~i~~~d~~~~----~~~~~~~~~~~~~~~~~ 82 (359)
+|.+.++..+. ...++-+-+ . .+++.+|+.. ..++|+.+|..+. +....- .
T Consensus 58 ~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~i----------e 127 (462)
T 2ece_A 58 SKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVI----------E 127 (462)
T ss_dssp TSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEE----------C
T ss_pred ceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeee----------c
Confidence 55566777764 225665555 6 7788888754 5579999998654 111110 0
Q ss_pred Ccccccccc--cccCCcceEEEEecCCCeEEEEeCC-------CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCC
Q 018242 83 AYEYDHAAK--EHICGRPLGLCFNKTNGDLYIADAY-------FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQST 153 (359)
Q Consensus 83 ~~~~~~~~~--~~~~~~p~gi~~~~~~g~l~v~~~~-------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g 153 (359)
|. ++ ......|+++.+.+ +| +||+... +++..+|.++.++...... ...+...+.++-+.|++
T Consensus 128 ~~-----~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~-~~~~~~~~Yd~~~~p~~ 199 (462)
T 2ece_A 128 PE-----EVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEI-DRGDQYLAYDFWWNLPN 199 (462)
T ss_dssp HH-----HHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCS-BCTTCCCCCCEEEETTT
T ss_pred hh-----hcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEcc-CCCCccccceEEECCCC
Confidence 00 11 11223699999999 77 9987543 3699999998886543321 12233456788899999
Q ss_pred CEEEEEeCCCcccc-ccceeeeeecCCCceEEEEeCCCCcEEEEeCC---CCCCceEEE--ccCCCEEEEEec-----CC
Q 018242 154 GIIYFTDSSSQFQR-RNHISVILSGDKTGRLMKYDPATKQVTVLLGN---LSFPNGVAL--SEDGNYILLAET-----TS 222 (359)
Q Consensus 154 ~~l~v~d~~~~~~~-~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~---~~~p~gia~--~~d~~~l~v~~~-----~~ 222 (359)
+.+++++.+..-.. ..+..+........+|..||.++++......- ...|.++.| +|++++.|++.. .+
T Consensus 200 ~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Ls 279 (462)
T 2ece_A 200 EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLS 279 (462)
T ss_dssp TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCC
T ss_pred CEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCC
Confidence 96666654311000 00000000001245799999887654432221 245777777 999999999999 88
Q ss_pred CEEEEEEcCCCCCcceeEe--e------cC----------CCCCCceEECCCCC-EEEEEecCCCccccccccCC----c
Q 018242 223 CRILRYWLKTSKAGTIEIV--A------QL----------PGFPDNIKRSPRGG-FWVGIHSRRKGISKLVLSFP----W 279 (359)
Q Consensus 223 ~~i~~~~~~~~~~~~~~~~--~------~~----------~~~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~----~ 279 (359)
+.|++|..+++.....+.+ . .+ ++.|.+|.+++||+ ||+++++.+. +.+|+ .
T Consensus 280 s~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~-----VavfdV~d~~ 354 (462)
T 2ece_A 280 SSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGE-----VRQYDISNPF 354 (462)
T ss_dssp EEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTE-----EEEEECSSTT
T ss_pred ceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCE-----EEEEEecCCC
Confidence 8998877654322111111 0 01 25688899999996 8998887664 33332 2
Q ss_pred cceeeecCCcccee--eee---ecccccCcceEEEEECCCCCEEEEEE
Q 018242 280 IGNVLIKLPIDIVK--IHS---SLVKLSGNGGMAMRISEQGNVLEILE 322 (359)
Q Consensus 280 ~g~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~ 322 (359)
+.+++..+++.... +.. .-..+.++ -+.++++|+.+.+-.
T Consensus 355 ~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr---~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 355 KPVLTGKVKLGGIFHRADHPAGHKLTGAPQ---MLEISRDGRRVYVTN 399 (462)
T ss_dssp SCEEEEEEECBTTTTCBCCTTSCCCCSCCC---CEEECTTSSEEEEEC
T ss_pred CcEEEEEEEeCCeeccccccccccCCCCCC---EEEEcCCCCEEEEEc
Confidence 45666666654210 000 00001122 366889998877654
No 120
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.25 E-value=1.9e-09 Score=99.57 Aligned_cols=198 Identities=12% Similarity=0.008 Sum_probs=119.3
Q ss_pred CCCCceEEEccCCCeeEEecCC------CEEEEEEcCCcceEEEeecCCCCCCCCCCccccccccc-ccCCcceEEEEec
Q 018242 33 AIGPESLAFDALGEGPYTGVSD------GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKE-HICGRPLGLCFNK 105 (359)
Q Consensus 33 ~~~p~~i~~~~~G~~l~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~gi~~~~ 105 (359)
...|+.+...|+| +++....+ ++|..+|.++.+...-- ... ....-+..+.+.+
T Consensus 137 ~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~------------------~~~~~~~~~~Yd~~~~p 197 (462)
T 2ece_A 137 YSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKW------------------EIDRGDQYLAYDFWWNL 197 (462)
T ss_dssp EEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEEC------------------CSBCTTCCCCCCEEEET
T ss_pred CCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEE------------------ccCCCCccccceEEECC
Confidence 4589999999999 44443333 68999999987543210 000 1111234577888
Q ss_pred CCCeEEEEeC-------------------CCcEEEEeCCCCeEEEEeecCCCccccccceEEE--eCCCCEEEEEeCCCc
Q 018242 106 TNGDLYIADA-------------------YFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDI--DQSTGIIYFTDSSSQ 164 (359)
Q Consensus 106 ~~g~l~v~~~-------------------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--d~~g~~l~v~d~~~~ 164 (359)
+.+.++++++ .+.|..+|.+++++...... +.+...|..|.+ +|+|+++|++..
T Consensus 198 ~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v--g~~g~~P~~i~f~~~Pdg~~aYV~~e--- 272 (462)
T 2ece_A 198 PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL--GEENRMALELRPLHDPTKLMGFINMV--- 272 (462)
T ss_dssp TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES--CTTEEEEEEEEECSSTTCCEEEEEEE---
T ss_pred CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec--CCCCCccceeEeeECCCCCEEEEEEe---
Confidence 4444444442 35699999988765433221 112345667766 999999999842
Q ss_pred cccccceeeeeecCCCceEEEEeCCCCcEEEEe-----C-----C-----------CCCCceEEEccCCCEEEEEecCCC
Q 018242 165 FQRRNHISVILSGDKTGRLMKYDPATKQVTVLL-----G-----N-----------LSFPNGVALSEDGNYILLAETTSC 223 (359)
Q Consensus 165 ~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-----~-----~-----------~~~p~gia~~~d~~~l~v~~~~~~ 223 (359)
+......+.|+.+..+.++++... . . ...|.+|.+++|+++||+++...+
T Consensus 273 ---------~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d 343 (462)
T 2ece_A 273 ---------VSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIG 343 (462)
T ss_dssp ---------EETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTT
T ss_pred ---------eeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCC
Confidence 000012334443332223322111 0 0 245789999999999999999999
Q ss_pred EEEEEEcCCCCCcceeEeecC---------------CCCCCceEECCCCC-EEEEE
Q 018242 224 RILRYWLKTSKAGTIEIVAQL---------------PGFPDNIKRSPRGG-FWVGI 263 (359)
Q Consensus 224 ~i~~~~~~~~~~~~~~~~~~~---------------~~~p~~i~~d~~G~-lwv~~ 263 (359)
.|.+|++......+....... .+.|.+++++++|+ ||+++
T Consensus 344 ~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 344 EVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999999864322221111111 12599999999996 77777
No 121
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.24 E-value=5.7e-09 Score=101.04 Aligned_cols=206 Identities=8% Similarity=-0.110 Sum_probs=133.7
Q ss_pred CCceEEEccC-CCeeEEe-cCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE
Q 018242 35 GPESLAFDAL-GEGPYTG-VSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI 112 (359)
Q Consensus 35 ~p~~i~~~~~-G~~l~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v 112 (359)
.|....+..| ++++|++ ..++.|..+|..+++.... + .....|+++++++++..+|+
T Consensus 155 ~P~~~~~~~d~~~~~~V~~~~~~~V~viD~~t~~v~~~--------------------i-~~g~~p~~v~~SpDGr~lyv 213 (567)
T 1qks_A 155 RPTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTV--------------------L-DTGYAVHISRLSASGRYLFV 213 (567)
T ss_dssp SCSSCCSCCCGGGEEEEEETTTTEEEEEETTTCCEEEE--------------------E-ECSSCEEEEEECTTSCEEEE
T ss_pred cccccccccCCCceEEEEeCCCCeEEEEECCCCeEEEE--------------------E-eCCCCccceEECCCCCEEEE
Confidence 3544443333 3335554 4568999999998754321 1 22346889999997777999
Q ss_pred EeCCCcEEEEeCC--CCeEEEEeecCCCccccccceEEEe----CCCCEEEEEeCCCccccccceeeeeecCCCceEEEE
Q 018242 113 ADAYFGLLKVGPE--GGLATAVATQSEGIPFRFCNSLDID----QSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKY 186 (359)
Q Consensus 113 ~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~d----~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 186 (359)
++..+.|..+|+. ++++..... . ...|.+++++ |||+++|+++. ..+.|..+
T Consensus 214 ~~~dg~V~viD~~~~t~~~v~~i~--~---G~~P~~ia~s~~~~pDGk~l~v~n~-----------------~~~~v~Vi 271 (567)
T 1qks_A 214 IGRDGKVNMIDLWMKEPTTVAEIK--I---GSEARSIETSKMEGWEDKYAIAGAY-----------------WPPQYVIM 271 (567)
T ss_dssp EETTSEEEEEETTSSSCCEEEEEE--C---CSEEEEEEECCSTTCTTTEEEEEEE-----------------ETTEEEEE
T ss_pred EcCCCeEEEEECCCCCCcEeEEEe--c---CCCCceeEEccccCCCCCEEEEEEc-----------------cCCeEEEE
Confidence 8866679999995 554432111 1 2357899999 69999999942 24578888
Q ss_pred eCCCCcEEEEe-CC-----------CCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEEC
Q 018242 187 DPATKQVTVLL-GN-----------LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRS 254 (359)
Q Consensus 187 d~~~~~~~~~~-~~-----------~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d 254 (359)
|..+.+..... .. ...+.++..++++...+++....+.|+.++....+...... ......|+++.+|
T Consensus 272 D~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~-i~~~~~~~d~~~~ 350 (567)
T 1qks_A 272 DGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTE-ISAERFLHDGGLD 350 (567)
T ss_dssp ETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEE-EECCSSEEEEEEC
T ss_pred ECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeee-eeccccccCceEC
Confidence 98876654322 11 11235788888888888888888999999976532111111 1234568889999
Q ss_pred CCCC-EEEEEecCCCcccccccc-CCccceeeecCCc
Q 018242 255 PRGG-FWVGIHSRRKGISKLVLS-FPWIGNVLIKLPI 289 (359)
Q Consensus 255 ~~G~-lwv~~~~~~~~~~~~~~~-~~~~g~~~~~~~~ 289 (359)
++|+ +|+++...+. +.+ +..++++...+++
T Consensus 351 pdgr~~~va~~~sn~-----V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 351 GSHRYFITAANARNK-----LVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp TTSCEEEEEEGGGTE-----EEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEeCCCCe-----EEEEECCCCcEEEEEec
Confidence 9997 5667766554 333 3457777776655
No 122
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.24 E-value=6.6e-08 Score=86.79 Aligned_cols=269 Identities=12% Similarity=0.026 Sum_probs=151.7
Q ss_pred CCceEEEccC----CCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeE
Q 018242 35 GPESLAFDAL----GEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDL 110 (359)
Q Consensus 35 ~p~~i~~~~~----G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l 110 (359)
.-.++++.++ +.+++++..++.|..|+..+.+..... .+.........+.+++ ++.+
T Consensus 34 ~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~------------------~l~gh~~~v~~~~~~~-~~~~ 94 (321)
T 3ow8_A 34 AIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQW------------------SLEGHQLGVVSVDISH-TLPI 94 (321)
T ss_dssp CEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEE------------------EECCCSSCEEEEEECS-SSSE
T ss_pred cEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeee------------------eeccCCCCEEEEEECC-CCCE
Confidence 3457888764 667888999999999998765332111 1222233456788888 5555
Q ss_pred EEE-eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCC
Q 018242 111 YIA-DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPA 189 (359)
Q Consensus 111 ~v~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 189 (359)
.++ ...+.|..+|..+++....... ....+..++++|+|+++..+ ...+.|..++.+
T Consensus 95 l~s~s~D~~i~lWd~~~~~~~~~~~~----~~~~~~~~~~spdg~~l~~g------------------~~dg~v~i~~~~ 152 (321)
T 3ow8_A 95 AASSSLDAHIRLWDLENGKQIKSIDA----GPVDAWTLAFSPDSQYLATG------------------THVGKVNIFGVE 152 (321)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEEC----CTTCCCCEEECTTSSEEEEE------------------CTTSEEEEEETT
T ss_pred EEEEeCCCcEEEEECCCCCEEEEEeC----CCccEEEEEECCCCCEEEEE------------------cCCCcEEEEEcC
Confidence 444 4445588899988765332221 11245679999999944333 335678889887
Q ss_pred CCcEEEE-eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCCC
Q 018242 190 TKQVTVL-LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRK 268 (359)
Q Consensus 190 ~~~~~~~-~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~ 268 (359)
+++.... .........++++|+++. +++...++.|..||+...+. ...+.........++++++|++.++....+.
T Consensus 153 ~~~~~~~~~~~~~~v~~~~~spdg~~-lasg~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~ 229 (321)
T 3ow8_A 153 SGKKEYSLDTRGKFILSIAYSPDGKY-LASGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 229 (321)
T ss_dssp TCSEEEEEECSSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEE--EEEECCCSSCCCEEEECTTSCEEEEECTTSC
T ss_pred CCceeEEecCCCceEEEEEECCCCCE-EEEEcCCCeEEEEECCCCcE--EEEEcccCCceeEEEEcCCCCEEEEEcCCCe
Confidence 7655433 333445678999999985 45556778999999764321 1222222233567999999987776655554
Q ss_pred ccccccccCCc-cceeeecCCccceeeeeecccccCcceEEEEECCCC----------CEEEEEEccCCceeeceEEEEE
Q 018242 269 GISKLVLSFPW-IGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQG----------NVLEILEEIGRKMWRSISEVEE 337 (359)
Q Consensus 269 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----------~~~~~~~~~~g~~~~~~~~~~~ 337 (359)
+..++. .++....+......+..+.+..... .++.-..++ ..+..+.... ..+..+..
T Consensus 230 -----i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~--~l~s~s~D~~v~iwd~~~~~~~~~~~~h~----~~v~~v~~ 298 (321)
T 3ow8_A 230 -----IKIYDVQHANLAGTLSGHASWVLNVAFCPDDT--HFVSSSSDKSVKVWDVGTRTCVHTFFDHQ----DQVWGVKY 298 (321)
T ss_dssp -----EEEEETTTCCEEEEECCCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTTEEEEEECCCS----SCEEEEEE
T ss_pred -----EEEEECCCcceeEEEcCCCCceEEEEECCCCC--EEEEEeCCCcEEEEeCCCCEEEEEEcCCC----CcEEEEEE
Confidence 555543 4555554444333344443332221 122222222 2222232211 23444544
Q ss_pred e-CCEEEEecCCCCeEEEEcCC
Q 018242 338 K-DGNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 338 ~-~g~l~ig~~~~~~l~~~~~~ 358 (359)
. +++..++.-.+..|.+.+.+
T Consensus 299 s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 299 NGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CTTSSEEEEEETTCCEEEEECC
T ss_pred CCCCCEEEEEeCCCeEEEEeCC
Confidence 3 45444554456778887754
No 123
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.23 E-value=7.4e-09 Score=94.12 Aligned_cols=192 Identities=8% Similarity=0.059 Sum_probs=120.0
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA 115 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~ 115 (359)
-.++++.++++ +.++..+|.|..||..+++...... ............+++++++..|..+..
T Consensus 85 v~~~~~s~d~~-l~~~s~dg~v~lWd~~~~~~~~~~~----------------~~~~~H~~~V~~v~~spdg~~l~sgs~ 147 (344)
T 4gqb_B 85 VADLTWVGERG-ILVASDSGAVELWELDENETLIVSK----------------FCKYEHDDIVSTVSVLSSGTQAVSGSK 147 (344)
T ss_dssp EEEEEEETTTE-EEEEETTSEEEEEEECTTSSCEEEE----------------EEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEEeCCCe-EEEEECCCEEEEEeccCCCceeEee----------------ccccCCCCCEEEEEECCCCCEEEEEeC
Confidence 35788999987 7888999999999998764221100 011122344678999994444444554
Q ss_pred CCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEE
Q 018242 116 YFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTV 195 (359)
Q Consensus 116 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 195 (359)
.+.|..+|..+++...... + ....+..+++.+++..++++- +..+.|..||..+++...
T Consensus 148 d~~i~iwd~~~~~~~~~~~---~-h~~~V~~~~~~~~~~~~l~s~-----------------s~D~~v~iwd~~~~~~~~ 206 (344)
T 4gqb_B 148 DICIKVWDLAQQVVLSSYR---A-HAAQVTCVAASPHKDSVFLSC-----------------SEDNRILLWDTRCPKPAS 206 (344)
T ss_dssp TSCEEEEETTTTEEEEEEC---C-CSSCEEEEEECSSCTTEEEEE-----------------ETTSCEEEEETTSSSCEE
T ss_pred CCeEEEEECCCCcEEEEEc---C-cCCceEEEEecCCCCCceeee-----------------ccccccccccccccceee
Confidence 5568899999887543222 1 123567889999886466652 235678899988765443
Q ss_pred EeC---CCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCC-EEEEEecCC
Q 018242 196 LLG---NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIHSRR 267 (359)
Q Consensus 196 ~~~---~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~~~~ 267 (359)
... ....+..++++|++..++++...++.|..||+...+. ...+.........+++.++|. +.++....+
T Consensus 207 ~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~--~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~ 280 (344)
T 4gqb_B 207 QIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC--VLSSAVHSQCVTGLVFSPHSVPFLASLSEDC 280 (344)
T ss_dssp ECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C--CEEEECCSSCEEEEEECSSSSCCEEEEETTS
T ss_pred eeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcE--EEEEcCCCCCEEEEEEccCCCeEEEEEeCCC
Confidence 221 1233568899987666788888889999999865422 222322223345689999884 555444444
No 124
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.22 E-value=1.3e-09 Score=93.73 Aligned_cols=187 Identities=16% Similarity=0.038 Sum_probs=119.0
Q ss_pred EEEEeeCCCCCCceEEEccCCCeeEEecCC---CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcc--e
Q 018242 25 VVQYQIEGAIGPESLAFDALGEGPYTGVSD---GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRP--L 99 (359)
Q Consensus 25 ~~~~~~~~~~~p~~i~~~~~G~~l~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~ 99 (359)
+..++.+.-..-+++.++ +|. ||.++.. ..|.++|+++++...-. .....+ .
T Consensus 34 v~~~phd~~~ftqGL~~~-~~~-LyestG~~g~S~v~~vD~~Tgkv~~~~---------------------~l~~~~Fge 90 (262)
T 3nol_A 34 VHSYPHDTKAFTEGFFYR-NGY-FYESTGLNGRSSIRKVDIESGKTLQQI---------------------ELGKRYFGE 90 (262)
T ss_dssp EEEEECCTTCEEEEEEEE-TTE-EEEEEEETTEEEEEEECTTTCCEEEEE---------------------ECCTTCCEE
T ss_pred EEEecCCCCcccceEEEE-CCE-EEEECCCCCCceEEEEECCCCcEEEEE---------------------ecCCcccee
Confidence 346777754444899998 665 8877754 38999999998654321 111233 3
Q ss_pred EEEEecCCCeEEEEeCCC-cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecC
Q 018242 100 GLCFNKTNGDLYIADAYF-GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGD 178 (359)
Q Consensus 100 gi~~~~~~g~l~v~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~ 178 (359)
|++++ +++||++++.. .+.++|+++.+...-... .+ ...+++. +|++||+++.
T Consensus 91 Git~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~-~~----eG~glt~--dg~~L~~SdG----------------- 144 (262)
T 3nol_A 91 GISDW--KDKIVGLTWKNGLGFVWNIRNLRQVRSFNY-DG----EGWGLTH--NDQYLIMSDG----------------- 144 (262)
T ss_dssp EEEEE--TTEEEEEESSSSEEEEEETTTCCEEEEEEC-SS----CCCCEEE--CSSCEEECCS-----------------
T ss_pred EEEEe--CCEEEEEEeeCCEEEEEECccCcEEEEEEC-CC----CceEEec--CCCEEEEECC-----------------
Confidence 56665 78999998765 488999998775432221 11 2245554 4555999952
Q ss_pred CCceEEEEeCCCCcEEEEeC------CCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecC--------
Q 018242 179 KTGRLMKYDPATKQVTVLLG------NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL-------- 244 (359)
Q Consensus 179 ~~g~v~~~d~~~~~~~~~~~------~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-------- 244 (359)
.+.|+.+|+++.+...... ....+|.+.+. +| .+|+....++.|.++|.+..+....-.+..+
T Consensus 145 -s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G-~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~ 221 (262)
T 3nol_A 145 -TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG-EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLP 221 (262)
T ss_dssp -SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCC
T ss_pred -CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC-EEEEEEccCCeEEEEECCCCcEEEEEECCcCcccccccc
Confidence 3479999999876553221 12345667775 66 5999998899999999765432111111101
Q ss_pred --CCCCCceEECCCC-CEEEEE
Q 018242 245 --PGFPDNIKRSPRG-GFWVGI 263 (359)
Q Consensus 245 --~~~p~~i~~d~~G-~lwv~~ 263 (359)
...|+|||+|+++ ++||+.
T Consensus 222 ~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 222 SPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp SSCCCEEEEEEETTTTEEEEEE
T ss_pred CcCCceEEEEEcCCCCEEEEEC
Confidence 1357889999976 577765
No 125
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.22 E-value=5.2e-09 Score=98.06 Aligned_cols=196 Identities=18% Similarity=0.170 Sum_probs=125.1
Q ss_pred CCceEEEcc-CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 35 GPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 35 ~p~~i~~~~-~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
.-.+|+++| +++++.++..+|.|..||..+.+...+. ...........|+|+|.+++++++
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~------------------~~~gH~~~V~~l~f~p~~~~~l~s 182 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFI------------------KGIGAGGSITGLKFNPLNTNQFYA 182 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEE------------------CCCSSSCCCCEEEECSSCTTEEEE
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEE------------------EccCCCCCEEEEEEeCCCCCEEEE
Confidence 456899998 5666888999999999998765322211 122233456789999766666665
Q ss_pred eCCC-cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCc
Q 018242 114 DAYF-GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQ 192 (359)
Q Consensus 114 ~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 192 (359)
...+ .|..+|.+++....+.... .....+..+.++++|+ +.++ +...+.|..+|.++..
T Consensus 183 ~s~D~~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~l~~-----------------g~~dg~i~~wd~~~~~ 242 (435)
T 4e54_B 183 SSMEGTTRLQDFKGNILRVFASSD--TINIWFCSLDVSASSR-MVVT-----------------GDNVGNVILLNMDGKE 242 (435)
T ss_dssp ECSSSCEEEEETTSCEEEEEECCS--SCSCCCCCEEEETTTT-EEEE-----------------ECSSSBEEEEESSSCB
T ss_pred EeCCCEEEEeeccCCceeEEeccC--CCCccEEEEEECCCCC-EEEE-----------------EeCCCcEeeeccCcce
Confidence 4444 4888899887765543311 1122456789999999 4444 1335679999987655
Q ss_pred EEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcc-eeEeecCCCCCCceEECCCCCEEEEEecCCC
Q 018242 193 VTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGT-IEIVAQLPGFPDNIKRSPRGGFWVGIHSRRK 268 (359)
Q Consensus 193 ~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~ 268 (359)
+..+..+......++++|+++.++++...++.|..||+....... .............++++++|++.++....+.
T Consensus 243 ~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~ 319 (435)
T 4e54_B 243 LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE 319 (435)
T ss_dssp CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC
T ss_pred eEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE
Confidence 444333344567899999988788888888999999986432211 1000011122345788899986665554443
No 126
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.21 E-value=1.1e-09 Score=100.29 Aligned_cols=213 Identities=8% Similarity=-0.018 Sum_probs=116.6
Q ss_pred CCCceEEEccCCCeeEEecC--CCEEEEEEcCCcceEEE-eecCCCCCCCCCC-----------ccccc-ccc-------
Q 018242 34 IGPESLAFDALGEGPYTGVS--DGRIIKWHQDQRRWLHF-ARTSPNRDGCEGA-----------YEYDH-AAK------- 91 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~--~~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~-----------~~~~~-~~~------- 91 (359)
..|++++++|||+.+|++.. .+.|..||..+++.... -..+........| .+... +..
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~ 187 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVA 187 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEE
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEe
Confidence 57999999999999998874 47899999988754321 1000000000000 00000 000
Q ss_pred --------cccCCcceEEEEecCCCeEEEEeCCCcEEEEeCCCCeEEEEee--cCC------CccccccceEEEeCCCCE
Q 018242 92 --------EHICGRPLGLCFNKTNGDLYIADAYFGLLKVGPEGGLATAVAT--QSE------GIPFRFCNSLDIDQSTGI 155 (359)
Q Consensus 92 --------~~~~~~p~gi~~~~~~g~l~v~~~~~~i~~~~~~~~~~~~~~~--~~~------~~~~~~~~~l~~d~~g~~ 155 (359)
......|..+...+++..+|+....+.++.+|..++....... ... ......+..++++++|++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~ 267 (361)
T 2oiz_A 188 SQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGR 267 (361)
T ss_dssp EEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTE
T ss_pred eeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCe
Confidence 0000111122222323344444433446666665443322111 000 000012334899999888
Q ss_pred EEEEeC--CCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC
Q 018242 156 IYFTDS--SSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS 233 (359)
Q Consensus 156 l~v~d~--~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~ 233 (359)
+|++.. +....+ ......|+.||..+++......... |.+++++|||++||+++. +.|.+||....
T Consensus 268 lyv~~~~~~~~~~~---------~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~--~~v~v~D~~t~ 335 (361)
T 2oiz_A 268 MYVFMHPDGKEGTH---------KFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG--GNVNVYDISQP 335 (361)
T ss_dssp EEEEEESSCCTTCT---------TCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS--SCEEEEECSSS
T ss_pred EEEEEccCCCcccc---------cCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC--CeEEEEECCCC
Confidence 999843 100000 0123479999999887654433334 999999999999999884 89999997654
Q ss_pred CCcceeEeecCCCCCCceEECCCCC
Q 018242 234 KAGTIEIVAQLPGFPDNIKRSPRGG 258 (359)
Q Consensus 234 ~~~~~~~~~~~~~~p~~i~~d~~G~ 258 (359)
.+.....+...+..|.+++++++|+
T Consensus 336 ~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 336 EPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SCEEEEEETTSCSSEEEEEECCCSC
T ss_pred cceeeEEeccCCCCcEEEEecCCCC
Confidence 2222222223556799999999985
No 127
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.20 E-value=2.6e-09 Score=91.83 Aligned_cols=186 Identities=13% Similarity=0.059 Sum_probs=119.6
Q ss_pred EEEEeeCCCCCCceEEEccCCCeeEEecCC-CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcc--eEE
Q 018242 25 VVQYQIEGAIGPESLAFDALGEGPYTGVSD-GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRP--LGL 101 (359)
Q Consensus 25 ~~~~~~~~~~~p~~i~~~~~G~~l~~~~~~-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~gi 101 (359)
+..++.+.-..-.++.++ ++. ||+++.. +.|.++|+++++...- . ....+ .|+
T Consensus 46 v~~~phd~~~ftqGL~~~-~~~-Ly~stG~~g~v~~iD~~Tgkv~~~--------------------~--l~~~~FgeGi 101 (268)
T 3nok_A 46 IREYPHATNAFTQGLVFH-QGH-FFESTGHQGTLRQLSLESAQPVWM--------------------E--RLGNIFAEGL 101 (268)
T ss_dssp EEEEECCTTCCEEEEEEE-TTE-EEEEETTTTEEEECCSSCSSCSEE--------------------E--ECTTCCEEEE
T ss_pred EEEEcCCCccccceEEEE-CCE-EEEEcCCCCEEEEEECCCCcEEeE--------------------E--CCCCcceeEE
Confidence 446777765555899997 355 7776654 7899999998854321 1 11223 346
Q ss_pred EEecCCCeEEEEeCCC-cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCC
Q 018242 102 CFNKTNGDLYIADAYF-GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKT 180 (359)
Q Consensus 102 ~~~~~~g~l~v~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~ 180 (359)
+++ +++||++++.. .+.++|+++.+...-... . ....+++. +|++||+++. .
T Consensus 102 t~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~-~----~eGwGLt~--Dg~~L~vSdG------------------s 154 (268)
T 3nok_A 102 ASD--GERLYQLTWTEGLLFTWSGMPPQRERTTRY-S----GEGWGLCY--WNGKLVRSDG------------------G 154 (268)
T ss_dssp EEC--SSCEEEEESSSCEEEEEETTTTEEEEEEEC-S----SCCCCEEE--ETTEEEEECS------------------S
T ss_pred EEe--CCEEEEEEccCCEEEEEECCcCcEEEEEeC-C----CceeEEec--CCCEEEEECC------------------C
Confidence 554 78999998765 488999998876432221 1 12346664 4556999952 4
Q ss_pred ceEEEEeCCCCcEEEEeCC------CCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-----------
Q 018242 181 GRLMKYDPATKQVTVLLGN------LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ----------- 243 (359)
Q Consensus 181 g~v~~~d~~~~~~~~~~~~------~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~----------- 243 (359)
+.|+.+|+++.+......- ...++.+.+. +| .+|+....++.|.++|.+..+....-.+..
T Consensus 155 ~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG-~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~ 232 (268)
T 3nok_A 155 TMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NG-VIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTN 232 (268)
T ss_dssp SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCC
T ss_pred CEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CC-EEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccC
Confidence 5799999998765532211 2345677765 66 499998889999999976543221111111
Q ss_pred CCCCCCceEECCCC-CEEEEE
Q 018242 244 LPGFPDNIKRSPRG-GFWVGI 263 (359)
Q Consensus 244 ~~~~p~~i~~d~~G-~lwv~~ 263 (359)
....++|||+|+++ +|||+.
T Consensus 233 ~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 233 PEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TTCCEEEEEECTTTCCEEEEE
T ss_pred cCCceEEEEEcCCCCEEEEeC
Confidence 11357899999975 688865
No 128
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.20 E-value=5.2e-09 Score=95.77 Aligned_cols=148 Identities=14% Similarity=-0.016 Sum_probs=95.5
Q ss_pred EEccCCCeeEEecC-----CCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEe
Q 018242 40 AFDALGEGPYTGVS-----DGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIAD 114 (359)
Q Consensus 40 ~~~~~G~~l~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~ 114 (359)
+..|+|+.+|+... .+.|+.+|..+.+... . ......|+ +++++++..+|+++
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~--------------------~-I~vG~~P~-va~spDG~~lyVan 96 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIG--------------------M-IDGGFLPN-PVVADDGSFIAHAS 96 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEE--------------------E-EEECSSCE-EEECTTSSCEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEE--------------------E-EECCCCCc-EEECCCCCEEEEEc
Confidence 34588988998865 4799999999875332 1 12334575 99999778899997
Q ss_pred C----------CCcEEEEeCCCCeEEEEeecCCC---ccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCc
Q 018242 115 A----------YFGLLKVGPEGGLATAVATQSEG---IPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTG 181 (359)
Q Consensus 115 ~----------~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g 181 (359)
. .+.|.++|..+.++........+ .....|+.++++|||+++|+++.. ..+
T Consensus 97 ~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~----------------~~~ 160 (386)
T 3sjl_D 97 TVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS----------------PAP 160 (386)
T ss_dssp EEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS----------------SSC
T ss_pred ccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC----------------CCC
Confidence 3 23489999999876432221111 112478899999999999999532 235
Q ss_pred eEEEEeCCCCcEEEEeCC----CCCCce----EEEccCCCEEEEEecCCCEE
Q 018242 182 RLMKYDPATKQVTVLLGN----LSFPNG----VALSEDGNYILLAETTSCRI 225 (359)
Q Consensus 182 ~v~~~d~~~~~~~~~~~~----~~~p~g----ia~~~d~~~l~v~~~~~~~i 225 (359)
.|..+|..++++...... ...|.+ +++++||+.+|+.....+.+
T Consensus 161 ~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 161 AVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp EEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred eEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 799999998876533211 112333 35666666555554433444
No 129
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.19 E-value=5.1e-09 Score=89.26 Aligned_cols=187 Identities=18% Similarity=0.079 Sum_probs=120.4
Q ss_pred EEEEeeCCCCCCceEEEccCCCeeEEecCC---CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcc--e
Q 018242 25 VVQYQIEGAIGPESLAFDALGEGPYTGVSD---GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRP--L 99 (359)
Q Consensus 25 ~~~~~~~~~~~p~~i~~~~~G~~l~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~ 99 (359)
+..++.+....-+|++++. ++ ||.++.. ..|.++|+.+++...-. .....+ .
T Consensus 12 ~~~~phd~~~ftqGL~~~~-~~-LyestG~~g~S~v~~vD~~tgkv~~~~---------------------~l~~~~fge 68 (243)
T 3mbr_X 12 VKRYPHDTTAFTEGLFYLR-GH-LYESTGETGRSSVRKVDLETGRILQRA---------------------EVPPPYFGA 68 (243)
T ss_dssp EEEEECCTTCCEEEEEEET-TE-EEEEECCTTSCEEEEEETTTCCEEEEE---------------------ECCTTCCEE
T ss_pred EEEcCCCCccccccEEEEC-CE-EEEECCCCCCceEEEEECCCCCEEEEE---------------------eCCCCccee
Confidence 4477778777888999986 55 8888765 48999999998654321 111223 3
Q ss_pred EEEEecCCCeEEEEeCCC-cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecC
Q 018242 100 GLCFNKTNGDLYIADAYF-GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGD 178 (359)
Q Consensus 100 gi~~~~~~g~l~v~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~ 178 (359)
|++++ +++||+.++.. .++++|.++.+...-... . ....+++. +|++||++|.
T Consensus 69 Gi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~-~----~~Gwglt~--dg~~L~vSdg----------------- 122 (243)
T 3mbr_X 69 GIVAW--RDRLIQLTWRNHEGFVYDLATLTPRARFRY-P----GEGWALTS--DDSHLYMSDG----------------- 122 (243)
T ss_dssp EEEEE--TTEEEEEESSSSEEEEEETTTTEEEEEEEC-S----SCCCEEEE--CSSCEEEECS-----------------
T ss_pred EEEEe--CCEEEEEEeeCCEEEEEECCcCcEEEEEeC-C----CCceEEee--CCCEEEEECC-----------------
Confidence 55555 78999998765 488999998775432221 1 12345554 4455999952
Q ss_pred CCceEEEEeCCCCcEEEEeCC------CCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecC--------
Q 018242 179 KTGRLMKYDPATKQVTVLLGN------LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL-------- 244 (359)
Q Consensus 179 ~~g~v~~~d~~~~~~~~~~~~------~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-------- 244 (359)
.+.|+.+|+++.+......- ....+.+.+. +| .+|+....++.|.++|....+....-.+..+
T Consensus 123 -s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G-~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~ 199 (243)
T 3mbr_X 123 -TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NG-ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALT 199 (243)
T ss_dssp -SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCC
T ss_pred -CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CC-EEEEEECCCCeEEEEECCCCCEEEEEECCcCcccccccc
Confidence 35799999998765432211 2334566654 55 4999888899999999765432211111111
Q ss_pred ---CCCCCceEECCCC-CEEEEE
Q 018242 245 ---PGFPDNIKRSPRG-GFWVGI 263 (359)
Q Consensus 245 ---~~~p~~i~~d~~G-~lwv~~ 263 (359)
...++|||.|+++ +|||+.
T Consensus 200 ~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 200 DSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp CTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCcCCceEEEEEcCCCCEEEEEC
Confidence 1256889999976 588765
No 130
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.19 E-value=3e-09 Score=91.49 Aligned_cols=163 Identities=18% Similarity=0.200 Sum_probs=112.3
Q ss_pred CCEEEEeeCCCCCCceEEEccCCCeeEEecC-CCEEEEEEcCCcceE-EEeecCCCCCCCCCCcccccccccccCCcceE
Q 018242 23 QGVVQYQIEGAIGPESLAFDALGEGPYTGVS-DGRIIKWHQDQRRWL-HFARTSPNRDGCEGAYEYDHAAKEHICGRPLG 100 (359)
Q Consensus 23 ~~~~~~~~~~~~~p~~i~~~~~G~~l~~~~~-~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g 100 (359)
+...++.+++-...++++++ |+.+|+.+. ++.++.+|+++.+.. ++. ......|
T Consensus 76 kv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ti~----------------------~~~eG~g 131 (262)
T 3nol_A 76 KTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVRSFN----------------------YDGEGWG 131 (262)
T ss_dssp CEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEEEEE----------------------CSSCCCC
T ss_pred cEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEEEEE----------------------CCCCceE
Confidence 33446667665566888886 334787664 579999999886432 221 1223456
Q ss_pred EEEecCCCeEEEEeCCCcEEEEeCCCCeEEEEeec-CCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCC
Q 018242 101 LCFNKTNGDLYIADAYFGLLKVGPEGGLATAVATQ-SEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDK 179 (359)
Q Consensus 101 i~~~~~~g~l~v~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~ 179 (359)
++.+ ++.||+++..+.|..+|+++.++...... ..+.+...+|.+.+. +|+ ||+....
T Consensus 132 lt~d--g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-lyan~w~----------------- 190 (262)
T 3nol_A 132 LTHN--DQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE-IFANVWQ----------------- 190 (262)
T ss_dssp EEEC--SSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETT-----------------
T ss_pred EecC--CCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE-EEEEEcc-----------------
Confidence 6644 78899998656799999998776543222 223455667777776 787 9998643
Q ss_pred CceEEEEeCCCCcEEEEeC--C-----------CCCCceEEEccCCCEEEEEecCCCEEEEEEc
Q 018242 180 TGRLMKYDPATKQVTVLLG--N-----------LSFPNGVALSEDGNYILLAETTSCRILRYWL 230 (359)
Q Consensus 180 ~g~v~~~d~~~~~~~~~~~--~-----------~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~ 230 (359)
...|.++|++++++..... + ...|||||++|+++.|||++..=..++.+.+
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 3479999999998764321 1 1357999999999999999877677777765
No 131
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.18 E-value=1.4e-08 Score=92.32 Aligned_cols=230 Identities=10% Similarity=-0.027 Sum_probs=130.3
Q ss_pred ceEEEEecCCCeEEEEeCCCcEEEEeCCCCeEEEEee-cCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeee
Q 018242 98 PLGLCFNKTNGDLYIADAYFGLLKVGPEGGLATAVAT-QSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILS 176 (359)
Q Consensus 98 p~gi~~~~~~g~l~v~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~ 176 (359)
...+++++ ++.+..+...+.|..+|.++++...... ...+ ....+..++++|+|+ ..++-
T Consensus 85 v~~~~~s~-d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~-H~~~V~~v~~spdg~-~l~sg---------------- 145 (344)
T 4gqb_B 85 VADLTWVG-ERGILVASDSGAVELWELDENETLIVSKFCKYE-HDDIVSTVSVLSSGT-QAVSG---------------- 145 (344)
T ss_dssp EEEEEEET-TTEEEEEETTSEEEEEEECTTSSCEEEEEEEEC-CSSCEEEEEECTTSS-EEEEE----------------
T ss_pred EEEEEEeC-CCeEEEEECCCEEEEEeccCCCceeEeeccccC-CCCCEEEEEECCCCC-EEEEE----------------
Confidence 56789999 7888888766668888988765322111 0000 123577899999999 44441
Q ss_pred cCCCceEEEEeCCCCcEEEEe-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-C-CCCCCceEE
Q 018242 177 GDKTGRLMKYDPATKQVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-L-PGFPDNIKR 253 (359)
Q Consensus 177 ~~~~g~v~~~d~~~~~~~~~~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~-~~~p~~i~~ 253 (359)
+..+.|..+|.++++..... .+......+++++++..++++...++.|..||+...+. ...+.. . ...+..+++
T Consensus 146 -s~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~ 222 (344)
T 4gqb_B 146 -SKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP--ASQIGCSAPGYLPTSLAW 222 (344)
T ss_dssp -ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC--EEECC----CCCEEEEEE
T ss_pred -eCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce--eeeeecceeeccceeeee
Confidence 23567999999887665433 33455678999999877888888889999999865422 111211 1 122456788
Q ss_pred CCC-CCEEEEEecCCCccccccccCC-ccceeeecCCccceeeeeecccccCc--------ceEEEEECCCCCEEEEEEc
Q 018242 254 SPR-GGFWVGIHSRRKGISKLVLSFP-WIGNVLIKLPIDIVKIHSSLVKLSGN--------GGMAMRISEQGNVLEILEE 323 (359)
Q Consensus 254 d~~-G~lwv~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~g~~~~~~~~ 323 (359)
.++ ++++++....+. +..++ ..++.+..+......+..+.+..... ...+..+|.+...+..+..
T Consensus 223 ~p~~~~~l~sg~~dg~-----v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~ 297 (344)
T 4gqb_B 223 HPQQSEVFVFGDENGT-----VSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQA 297 (344)
T ss_dssp CSSCTTEEEEEETTSE-----EEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECC
T ss_pred cCCCCcceEEeccCCc-----EEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcC
Confidence 775 467665544443 45554 35666655554444444444432221 0123333433333333222
Q ss_pred cCCceeeceEEEEEe--CCEEEEecCCCCeEEEEcCC
Q 018242 324 IGRKMWRSISEVEEK--DGNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 324 ~~g~~~~~~~~~~~~--~g~l~ig~~~~~~l~~~~~~ 358 (359)
+. ..+..+... +.+|+++.-.+..|.+.+++
T Consensus 298 H~----~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 298 HR----DFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp CS----SCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred CC----CCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 21 244555543 44566554346667776654
No 132
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.17 E-value=3.8e-08 Score=91.52 Aligned_cols=154 Identities=12% Similarity=0.140 Sum_probs=105.4
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE-Ee
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI-AD 114 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v-~~ 114 (359)
..+++++|++.+++++..++.|..||..+++... .+.........+++++ ++++++ +.
T Consensus 111 V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~--------------------~l~~h~~~V~~v~~~~-~~~~l~sgs 169 (410)
T 1vyh_C 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFER--------------------TLKGHTDSVQDISFDH-SGKLLASCS 169 (410)
T ss_dssp EEEEEECSSSSEEEEEESSSCEEEEETTTCCCCE--------------------EECCCSSCEEEEEECT-TSSEEEEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE--------------------EEeccCCcEEEEEEcC-CCCEEEEEe
Confidence 3488999999988889999999999998764321 1222334467899999 555444 45
Q ss_pred CCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEE
Q 018242 115 AYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVT 194 (359)
Q Consensus 115 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 194 (359)
..+.|..+|..+++..... .+ ....+..+.++|+|+ ..++- +..+.|..||..++...
T Consensus 170 ~D~~i~iwd~~~~~~~~~~---~~-h~~~V~~v~~~p~~~-~l~s~-----------------s~D~~i~~wd~~~~~~~ 227 (410)
T 1vyh_C 170 ADMTIKLWDFQGFECIRTM---HG-HDHNVSSVSIMPNGD-HIVSA-----------------SRDKTIKMWEVQTGYCV 227 (410)
T ss_dssp TTSCCCEEETTSSCEEECC---CC-CSSCEEEEEECSSSS-EEEEE-----------------ETTSEEEEEETTTCCEE
T ss_pred CCCeEEEEeCCCCceeEEE---cC-CCCCEEEEEEeCCCC-EEEEE-----------------eCCCeEEEEECCCCcEE
Confidence 4455888898876643211 11 123577899999999 44441 33568999998877644
Q ss_pred -EEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC
Q 018242 195 -VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS 233 (359)
Q Consensus 195 -~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~ 233 (359)
.+.........++++++++ ++++...++.|..|++...
T Consensus 228 ~~~~~h~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~ 266 (410)
T 1vyh_C 228 KTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVWVVATK 266 (410)
T ss_dssp EEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTC
T ss_pred EEEeCCCccEEEEEECCCCC-EEEEEcCCCeEEEEECCCC
Confidence 3334444567889999998 5666667889999998643
No 133
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.16 E-value=9.5e-10 Score=104.98 Aligned_cols=209 Identities=13% Similarity=0.038 Sum_probs=134.3
Q ss_pred CCceEEEcc-----CCCeeEEecC-CCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEE-e-cC
Q 018242 35 GPESLAFDA-----LGEGPYTGVS-DGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCF-N-KT 106 (359)
Q Consensus 35 ~p~~i~~~~-----~G~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~-~-~~ 106 (359)
.++ +..+. ||+.+|+... +++|.++|+++.+...+- . .+....|+|+++ . |+
T Consensus 87 ~hh-~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii------------------~-ip~g~~phg~~~~~~p~ 146 (595)
T 1fwx_A 87 LHH-VHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAIL------------------E-IPNAKGIHGLRPQKWPR 146 (595)
T ss_dssp BCC-EEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEE------------------E-CSSCCSEEEEEECCSSB
T ss_pred CCc-cccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEE------------------e-CCCCCCCcceeeeecCC
Confidence 444 55555 8888888654 578999999987533321 1 122345899998 4 66
Q ss_pred CCeEEEEeC-----------------C-CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCcccc-
Q 018242 107 NGDLYIADA-----------------Y-FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQR- 167 (359)
Q Consensus 107 ~g~l~v~~~-----------------~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~- 167 (359)
.+.+|+++. . +.+..+|.++.++..-... . ..|..++++++|+++|++...+.-..
T Consensus 147 ~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~V-g----g~pd~~~~spdGk~~~vt~~~se~~~~ 221 (595)
T 1fwx_A 147 SNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLV-S----GNLDNCDADYEGKWAFSTSYNSEKGMT 221 (595)
T ss_dssp CSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEE-S----SCCCCEEECSSSSEEEEEESCTTCCSS
T ss_pred CcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEe-C----CCccceEECCCCCEEEEEecCcccCcc
Confidence 788888841 1 1377889888765432221 1 15788999999999999964331100
Q ss_pred ------c--ccee--------ee---eecCCCceEEEEeCCC--CcE-EEEeCCCCCCceEEEccCCCEEEEEecCCCEE
Q 018242 168 ------R--NHIS--------VI---LSGDKTGRLMKYDPAT--KQV-TVLLGNLSFPNGVALSEDGNYILLAETTSCRI 225 (359)
Q Consensus 168 ------~--~~~~--------~~---~~~~~~g~v~~~d~~~--~~~-~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i 225 (359)
. .+.. +. ......+.|..+|..+ ++. .........|.|+.++|||+++|+++...+++
T Consensus 222 i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~V 301 (595)
T 1fwx_A 222 LPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTV 301 (595)
T ss_dssp HHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBE
T ss_pred hhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeE
Confidence 0 0000 00 0001124588999986 333 22233346899999999999999999999999
Q ss_pred EEEEcCCC------CCcc-eeEeec--CCCCCCceEECCCCCEEEEEecCCC
Q 018242 226 LRYWLKTS------KAGT-IEIVAQ--LPGFPDNIKRSPRGGFWVGIHSRRK 268 (359)
Q Consensus 226 ~~~~~~~~------~~~~-~~~~~~--~~~~p~~i~~d~~G~lwv~~~~~~~ 268 (359)
.+|+.+.. ++.. .....+ ++..|..+++|++|++|++..-++.
T Consensus 302 sVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsq 353 (595)
T 1fwx_A 302 TVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQ 353 (595)
T ss_dssp EEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTE
T ss_pred EEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCc
Confidence 99998632 1111 112223 4456999999999999998877665
No 134
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.16 E-value=7.8e-09 Score=88.11 Aligned_cols=164 Identities=13% Similarity=0.125 Sum_probs=113.1
Q ss_pred CCEEEEeeCCCCCCceEEEccCCCeeEEec-CCCEEEEEEcCCcceE-EEeecCCCCCCCCCCcccccccccccCCcceE
Q 018242 23 QGVVQYQIEGAIGPESLAFDALGEGPYTGV-SDGRIIKWHQDQRRWL-HFARTSPNRDGCEGAYEYDHAAKEHICGRPLG 100 (359)
Q Consensus 23 ~~~~~~~~~~~~~p~~i~~~~~G~~l~~~~-~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g 100 (359)
+...++..+.-...++++++. ++ +|+.+ ..+.++++|+++.+.. +|. ....+.|
T Consensus 54 kv~~~~~l~~~~fgeGi~~~~-~~-ly~ltw~~~~v~v~D~~tl~~~~ti~----------------------~~~~Gwg 109 (243)
T 3mbr_X 54 RILQRAEVPPPYFGAGIVAWR-DR-LIQLTWRNHEGFVYDLATLTPRARFR----------------------YPGEGWA 109 (243)
T ss_dssp CEEEEEECCTTCCEEEEEEET-TE-EEEEESSSSEEEEEETTTTEEEEEEE----------------------CSSCCCE
T ss_pred CEEEEEeCCCCcceeEEEEeC-CE-EEEEEeeCCEEEEEECCcCcEEEEEe----------------------CCCCceE
Confidence 334467777666678888863 44 77655 4589999999886422 221 1234566
Q ss_pred EEEecCCCeEEEEeCCCcEEEEeCCCCeEEEEeec-CCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCC
Q 018242 101 LCFNKTNGDLYIADAYFGLLKVGPEGGLATAVATQ-SEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDK 179 (359)
Q Consensus 101 i~~~~~~g~l~v~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~ 179 (359)
++. +++.||+++..+.|..+|+++.++...... ..+.+...+|.+... +|+ +|+....
T Consensus 110 lt~--dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~-lyanvw~----------------- 168 (243)
T 3mbr_X 110 LTS--DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE-LLANVWL----------------- 168 (243)
T ss_dssp EEE--CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETT-----------------
T ss_pred Eee--CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE-EEEEECC-----------------
Confidence 664 478999998766799999998776433321 233455567777765 777 9988643
Q ss_pred CceEEEEeCCCCcEEEEeC--------------CCCCCceEEEccCCCEEEEEecCCCEEEEEEcC
Q 018242 180 TGRLMKYDPATKQVTVLLG--------------NLSFPNGVALSEDGNYILLAETTSCRILRYWLK 231 (359)
Q Consensus 180 ~g~v~~~d~~~~~~~~~~~--------------~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~ 231 (359)
...|.++|+.++++..... ....+||||++|++++||+++-.=..++.+.+.
T Consensus 169 s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 169 TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEEC
T ss_pred CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEEe
Confidence 3479999999998764321 113569999999999999998776778877654
No 135
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.16 E-value=5.3e-09 Score=89.96 Aligned_cols=162 Identities=24% Similarity=0.290 Sum_probs=111.0
Q ss_pred CCEEEEeeCCCCCCceEEEccCCCeeEEec-CCCEEEEEEcCCcceE-EEeecCCCCCCCCCCcccccccccccCCcceE
Q 018242 23 QGVVQYQIEGAIGPESLAFDALGEGPYTGV-SDGRIIKWHQDQRRWL-HFARTSPNRDGCEGAYEYDHAAKEHICGRPLG 100 (359)
Q Consensus 23 ~~~~~~~~~~~~~p~~i~~~~~G~~l~~~~-~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g 100 (359)
+...++ +++-...++++++. ++ +|+.+ .++.++.+|+++.+.. +|. ......|
T Consensus 86 kv~~~~-l~~~~FgeGit~~g-~~-Ly~ltw~~~~v~V~D~~Tl~~~~ti~----------------------~~~eGwG 140 (268)
T 3nok_A 86 QPVWME-RLGNIFAEGLASDG-ER-LYQLTWTEGLLFTWSGMPPQRERTTR----------------------YSGEGWG 140 (268)
T ss_dssp SCSEEE-ECTTCCEEEEEECS-SC-EEEEESSSCEEEEEETTTTEEEEEEE----------------------CSSCCCC
T ss_pred cEEeEE-CCCCcceeEEEEeC-CE-EEEEEccCCEEEEEECCcCcEEEEEe----------------------CCCceeE
Confidence 334455 66555668888864 34 77665 4578999999886432 221 1233567
Q ss_pred EEEecCCCeEEEEeCCCcEEEEeCCCCeEEEEeec-CCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCC
Q 018242 101 LCFNKTNGDLYIADAYFGLLKVGPEGGLATAVATQ-SEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDK 179 (359)
Q Consensus 101 i~~~~~~g~l~v~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~ 179 (359)
++.+ ++.||+++..+.|..+|+++.++...... ..+.+...+|.|.+. +|+ ||+....
T Consensus 141 Lt~D--g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-lyanvw~----------------- 199 (268)
T 3nok_A 141 LCYW--NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV-IYANIWH----------------- 199 (268)
T ss_dssp EEEE--TTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETT-----------------
T ss_pred EecC--CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE-EEEEECC-----------------
Confidence 7755 78999998666799999998876543221 233455577888776 787 9998643
Q ss_pred CceEEEEeCCCCcEEEEeC--------------CCCCCceEEEccCCCEEEEEecCCCEEEEEEc
Q 018242 180 TGRLMKYDPATKQVTVLLG--------------NLSFPNGVALSEDGNYILLAETTSCRILRYWL 230 (359)
Q Consensus 180 ~g~v~~~d~~~~~~~~~~~--------------~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~ 230 (359)
...|.++|++++++..... ....+||||++|+++.||+++-.=..++.+.+
T Consensus 200 s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 200 SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEEE
T ss_pred CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEEE
Confidence 3479999999998764321 11357999999999999999876667776654
No 136
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.15 E-value=4.5e-08 Score=88.31 Aligned_cols=156 Identities=12% Similarity=0.075 Sum_probs=102.8
Q ss_pred ccCCcceEEEEecCCCeEEEEeC-CCcEEEEeCCCCeEEEEeec--CCCccccccceEEEeCC----CCEEEEEeCCCcc
Q 018242 93 HICGRPLGLCFNKTNGDLYIADA-YFGLLKVGPEGGLATAVATQ--SEGIPFRFCNSLDIDQS----TGIIYFTDSSSQF 165 (359)
Q Consensus 93 ~~~~~p~gi~~~~~~g~l~v~~~-~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~d~~----g~~l~v~d~~~~~ 165 (359)
.....|.+|++.+ +|.+||+.. .+.|++++.++++.+.+... ........+.+|+++|+ |. ||++.+.
T Consensus 29 ~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~-lYv~yt~--- 103 (347)
T 3das_A 29 TGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHM-VYAYFTS--- 103 (347)
T ss_dssp CCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCE-EEEEEEC---
T ss_pred cCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCE-EEEEEec---
Confidence 4456799999999 899999987 55699998877766544321 11223457889999985 55 9997332
Q ss_pred ccccceeeeeecCCCceEEEEeCCCC--------cEEEEeC-----CCCCCceEEEccCCCEEEEEec------------
Q 018242 166 QRRNHISVILSGDKTGRLMKYDPATK--------QVTVLLG-----NLSFPNGVALSEDGNYILLAET------------ 220 (359)
Q Consensus 166 ~~~~~~~~~~~~~~~g~v~~~d~~~~--------~~~~~~~-----~~~~p~gia~~~d~~~l~v~~~------------ 220 (359)
.....|.++..+.+ ..+.+.. .......|+|++||+ ||++.-
T Consensus 104 ------------~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~ 170 (347)
T 3das_A 104 ------------ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRK 170 (347)
T ss_dssp ------------SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTT
T ss_pred ------------CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCC
Confidence 11346777765431 1222221 123456799999996 899842
Q ss_pred -CCCEEEEEEcCCCC-----CcceeEeec-CCCCCCceEECCCCCEEEEEecCC
Q 018242 221 -TSCRILRYWLKTSK-----AGTIEIVAQ-LPGFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 221 -~~~~i~~~~~~~~~-----~~~~~~~~~-~~~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
..+.|+|++.++.- ....+++.. +. -|.++++|++|+||++..+..
T Consensus 171 ~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~ 223 (347)
T 3das_A 171 SLGGKILRMTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQD 223 (347)
T ss_dssp CSTTCEEEECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSS
T ss_pred CCCCEEEEEeCCCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCC
Confidence 35789999876431 012234443 22 388999999999999998643
No 137
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.15 E-value=1.1e-07 Score=82.15 Aligned_cols=202 Identities=9% Similarity=0.054 Sum_probs=125.4
Q ss_pred cCCcceEEEEecCCCeEEEE-eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCcccccccee
Q 018242 94 ICGRPLGLCFNKTNGDLYIA-DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHIS 172 (359)
Q Consensus 94 ~~~~p~gi~~~~~~g~l~v~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~ 172 (359)
...++.||+++++++.||+. +....|+++|+. +++..... .. ....+.+|+++++|+ +|+++-.
T Consensus 25 ~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~-l~--g~~D~EGIa~~~~g~-~~vs~E~---------- 89 (255)
T 3qqz_A 25 ITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIP-LD--FVKDLETIEYIGDNQ-FVISDER---------- 89 (255)
T ss_dssp CCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEE-CS--SCSSEEEEEECSTTE-EEEEETT----------
T ss_pred cccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEe-cC--CCCChHHeEEeCCCE-EEEEECC----------
Confidence 33568899999978899986 444469999998 55433222 11 224678999999998 8888432
Q ss_pred eeeecCCCceEEEEeCCC-CcEE---EEeCC------CCCCceEEEccCCCEEEEEecCCC-EEEEEEcCCCCCcceeEe
Q 018242 173 VILSGDKTGRLMKYDPAT-KQVT---VLLGN------LSFPNGVALSEDGNYILLAETTSC-RILRYWLKTSKAGTIEIV 241 (359)
Q Consensus 173 ~~~~~~~~g~v~~~d~~~-~~~~---~~~~~------~~~p~gia~~~d~~~l~v~~~~~~-~i~~~~~~~~~~~~~~~~ 241 (359)
.+.++.++... +... ..... .....|+|+++++++||++..... .|+.++-.. ........
T Consensus 90 -------~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~-~~~~l~i~ 161 (255)
T 3qqz_A 90 -------DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLL-SSNELHIS 161 (255)
T ss_dssp -------TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTT-CSSCCEEE
T ss_pred -------CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccc-cCCceeee
Confidence 23455554322 2211 11111 223479999999988999887765 788887110 01112222
Q ss_pred ec------C-CCCCCceEECC-CCCEEEEEecCCCccccccccCCccceeeecCCccceeeeeecccccCcceEEEEECC
Q 018242 242 AQ------L-PGFPDNIKRSP-RGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISE 313 (359)
Q Consensus 242 ~~------~-~~~p~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (359)
.. . -.-+.++++|+ .|++|+.+..+ ..++.+|.
T Consensus 162 ~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s---------------------------------------~~L~~~d~ 202 (255)
T 3qqz_A 162 KDKALQRQFTLDDVSGAEFNQQKNTLLVLSHES---------------------------------------RALQEVTL 202 (255)
T ss_dssp ECHHHHHTCCSSCCCEEEEETTTTEEEEEETTT---------------------------------------TEEEEECT
T ss_pred cchhhccccccCCceeEEEcCCCCeEEEEECCC---------------------------------------CeEEEEcC
Confidence 11 1 11267899998 46788876543 35777888
Q ss_pred CCCEEEEEEccCCc-----eeeceEEEEEe-CCEEEEecCCCCeEEEEcCC
Q 018242 314 QGNVLEILEEIGRK-----MWRSISEVEEK-DGNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 314 ~g~~~~~~~~~~g~-----~~~~~~~~~~~-~g~l~ig~~~~~~l~~~~~~ 358 (359)
+|+++..+.-..|. .+..+-+++.+ +|+|||.+= .+.+++++..
T Consensus 203 ~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE-~n~~y~f~~~ 252 (255)
T 3qqz_A 203 VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSE-PNRFYRFTPQ 252 (255)
T ss_dssp TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEET-TTEEEEEEC-
T ss_pred CCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcC-CceEEEEEec
Confidence 88876665533331 24566777766 789999974 5678877643
No 138
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.15 E-value=1.2e-09 Score=99.88 Aligned_cols=236 Identities=6% Similarity=-0.143 Sum_probs=134.8
Q ss_pred CEEEEeeCCCCCCceEEEccCCCeeEEec----------CCCEEEEEEcCCcceE-EEeecCCCCCCCCCCccccccccc
Q 018242 24 GVVQYQIEGAIGPESLAFDALGEGPYTGV----------SDGRIIKWHQDQRRWL-HFARTSPNRDGCEGAYEYDHAAKE 92 (359)
Q Consensus 24 ~~~~~~~~~~~~p~~i~~~~~G~~l~~~~----------~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 92 (359)
.+-+++.+. .| +++++|||+.+|++. .++.|..+|+.+.+.. ++..+... .+
T Consensus 58 v~~~i~vG~--~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~-------------~~- 120 (368)
T 1mda_H 58 TLGHSLGAF--LS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAP-------------RF- 120 (368)
T ss_dssp EEEEEEECT--TC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSC-------------SC-
T ss_pred EEEEEeCCC--CC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcc-------------cc-
Confidence 344788884 68 999999999999986 2478999999987543 22110000 00
Q ss_pred ccCCcceEEEEecCCCeEEEEeCC--CcEEE--EeCCCCeEEEEeecCCCccccccce----EEEeCCCCEEEEEeCCC-
Q 018242 93 HICGRPLGLCFNKTNGDLYIADAY--FGLLK--VGPEGGLATAVATQSEGIPFRFCNS----LDIDQSTGIIYFTDSSS- 163 (359)
Q Consensus 93 ~~~~~p~gi~~~~~~g~l~v~~~~--~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~----l~~d~~g~~l~v~d~~~- 163 (359)
.....|++++++++++.+|+++.. +.+.. +|+.+ +..+.. .+.....+.+ ++..++|+.+++ +...
T Consensus 121 ~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v--~~~~~~~p~g~~~~~~~~~dg~~~~v-d~~~~ 195 (368)
T 1mda_H 121 SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKS--ASCFHIHPGAAATHYLGSCPASLAAS-DLAAA 195 (368)
T ss_dssp CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEEC--SSCCCCEEEETTEEECCCCTTSCEEE-ECCSS
T ss_pred ccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEEC--CCceEEccCCCeEEEEEcCCCCEEEE-ECccc
Confidence 012468999999977889999864 34666 78766 333321 1100001111 334455553333 2221
Q ss_pred -ccccc-------------cce-----eeeeecCCCceEEEEeCCCCcEEEEeC----------CCCCCce---EEEccC
Q 018242 164 -QFQRR-------------NHI-----SVILSGDKTGRLMKYDPATKQVTVLLG----------NLSFPNG---VALSED 211 (359)
Q Consensus 164 -~~~~~-------------~~~-----~~~~~~~~~g~v~~~d~~~~~~~~~~~----------~~~~p~g---ia~~~d 211 (359)
++... ... ..++-.+. +.|+.+|..++....+.. ....|.+ +++++|
T Consensus 196 ~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~d 274 (368)
T 1mda_H 196 PAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKN 274 (368)
T ss_dssp CCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETT
T ss_pred cccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCC
Confidence 00000 000 00000011 567888876433222210 1123455 899999
Q ss_pred CCEEEEEec-C-------CCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCC-EEEEEe-cCCCcccccccc-CCcc
Q 018242 212 GNYILLAET-T-------SCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIH-SRRKGISKLVLS-FPWI 280 (359)
Q Consensus 212 ~~~l~v~~~-~-------~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~-~~~~~~~~~~~~-~~~~ 280 (359)
++++|++.. . .+.+.++|++..+. ......+..|.+|+++++|+ +|+++. ..+. +.+ +..+
T Consensus 275 g~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v---v~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~-----VsVID~~t 346 (368)
T 1mda_H 275 TDGIMILTVEHSRSCLAAAENTSSVTASVGQT---SGPISNGHDSDAIIAAQDGASDNYANSAGTEV-----LDIYDAAS 346 (368)
T ss_dssp TTEEEEEEEECSSCTTSCEEEEEEEESSSCCE---EECCEEEEEECEEEECCSSSCEEEEEETTTTE-----EEEEESSS
T ss_pred CCEEEEEeccccCcccccCCCEEEEECCCCeE---EEEEECCCCcceEEECCCCCEEEEEccCCCCe-----EEEEECCC
Confidence 999999865 2 35677999765421 11111334699999999996 999988 4554 444 4468
Q ss_pred ceeeecCCcc
Q 018242 281 GNVLIKLPID 290 (359)
Q Consensus 281 g~~~~~~~~~ 290 (359)
++++++++.+
T Consensus 347 ~kvv~~I~vg 356 (368)
T 1mda_H 347 DQDQSSVELD 356 (368)
T ss_dssp CEEEEECCCC
T ss_pred CcEEEEEECC
Confidence 8888888765
No 139
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.15 E-value=5.2e-08 Score=88.08 Aligned_cols=203 Identities=10% Similarity=0.040 Sum_probs=126.6
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
..-.+++++++|+++.++..++.|..||..+++... .+.........+++++++..+..+
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~--------------------~~~~~~~~v~~~~~s~~~~~l~s~ 115 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVH--------------------AIPLRSSWVMTCAYAPSGNYVACG 115 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEE--------------------EEECSSSCEEEEEECTTSSEEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcce--------------------EeecCCccEEEEEECCCCCEEEEE
Confidence 455689999999988899999999999987753221 111222345678899944444445
Q ss_pred eCCCcEEEEeCCCCe--EEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCC
Q 018242 114 DAYFGLLKVGPEGGL--ATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATK 191 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 191 (359)
...+.+..++..++. ...... ..+ ....+..+.+.+++. +..+ +..+.|..||..++
T Consensus 116 ~~d~~v~iw~~~~~~~~~~~~~~-~~~-h~~~v~~~~~~~~~~-l~s~------------------s~d~~i~~wd~~~~ 174 (340)
T 1got_B 116 GLDNICSIYNLKTREGNVRVSRE-LAG-HTGYLSCCRFLDDNQ-IVTS------------------SGDTTCALWDIETG 174 (340)
T ss_dssp ETTCEEEEEETTTCSBSCEEEEE-EEC-CSSCEEEEEEEETTE-EEEE------------------ETTSCEEEEETTTT
T ss_pred eCCCeEEEEECccCCCcceeEEE-ecC-CCccEEEEEECCCCc-EEEE------------------ECCCcEEEEECCCC
Confidence 555557788876542 111111 011 112455677778776 6555 23467889998877
Q ss_pred cEEEEe-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCCCcc
Q 018242 192 QVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGI 270 (359)
Q Consensus 192 ~~~~~~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~~~ 270 (359)
+..... .+......++++|+++ ++++...++.|..||+.... ....+.........+++.++|+++++....+.
T Consensus 175 ~~~~~~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~-- 249 (340)
T 1got_B 175 QQTTTFTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGM--CRQTFTGHESDINAICFFPNGNAFATGSDDAT-- 249 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCS--EEEEECCCSSCEEEEEECTTSSEEEEEETTSC--
T ss_pred cEEEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCe--eEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCc--
Confidence 654433 3334567899999988 56677788899999986432 12223222333567899999987776655554
Q ss_pred ccccccCCc-cceeee
Q 018242 271 SKLVLSFPW-IGNVLI 285 (359)
Q Consensus 271 ~~~~~~~~~-~g~~~~ 285 (359)
+..++. .++.+.
T Consensus 250 ---v~iwd~~~~~~~~ 262 (340)
T 1got_B 250 ---CRLFDLRADQELM 262 (340)
T ss_dssp ---EEEEETTTTEEEE
T ss_pred ---EEEEECCCCcEEE
Confidence 555543 344433
No 140
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.14 E-value=3.8e-08 Score=87.50 Aligned_cols=216 Identities=8% Similarity=0.045 Sum_probs=129.7
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
..-.+++++|+|..+.++..++.|..||..+++... .+.........+.+.+++..+..+
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~--------------------~~~~~~~~v~~~~~~~~~~~l~s~ 73 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVR--------------------SIQVTETPVRAGKFIARKNWIIVG 73 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE--------------------EEECCSSCEEEEEEEGGGTEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeE--------------------EeeccCCcEEEEEEeCCCCEEEEE
Confidence 356799999999988889999999999998763221 111222334678899855555556
Q ss_pred eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCC-c
Q 018242 114 DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATK-Q 192 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~-~ 192 (359)
...+.|..+|.++++....... ....+..++++|+++ +.++- +..+.|..||.+++ .
T Consensus 74 s~d~~i~vwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~-~l~sg-----------------s~D~~v~lWd~~~~~~ 131 (304)
T 2ynn_A 74 SDDFRIRVFNYNTGEKVVDFEA----HPDYIRSIAVHPTKP-YVLSG-----------------SDDLTVKLWNWENNWA 131 (304)
T ss_dssp ETTSEEEEEETTTCCEEEEEEC----CSSCEEEEEECSSSS-EEEEE-----------------ETTSCEEEEEGGGTTE
T ss_pred CCCCEEEEEECCCCcEEEEEeC----CCCcEEEEEEcCCCC-EEEEE-----------------CCCCeEEEEECCCCcc
Confidence 6555688899988764332221 123577899999999 55541 23567888887655 3
Q ss_pred EEE-EeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-CCCCCCceEEC--CCCCEEEEEecCCC
Q 018242 193 VTV-LLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRS--PRGGFWVGIHSRRK 268 (359)
Q Consensus 193 ~~~-~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d--~~G~lwv~~~~~~~ 268 (359)
... +..+......++++|++..++++...++.|..||+...... ..+.. .......+.+. +++.+.++....+.
T Consensus 132 ~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~ 209 (304)
T 2ynn_A 132 LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN--FTLTTGQERGVNYVDYYPLPDKPYMITASDDLT 209 (304)
T ss_dssp EEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCS--EEEECCCTTCEEEEEECCSTTCCEEEEEETTSE
T ss_pred hhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcc--ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCe
Confidence 322 33334456789999843336777778899999998543211 11111 11111234444 36666665555443
Q ss_pred ccccccccCC-ccceeeecCCccceeeeeec
Q 018242 269 GISKLVLSFP-WIGNVLIKLPIDIVKIHSSL 298 (359)
Q Consensus 269 ~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~ 298 (359)
+..++ ..++.+..+..+...+..+.
T Consensus 210 -----i~iWd~~~~~~~~~~~~h~~~v~~~~ 235 (304)
T 2ynn_A 210 -----IKIWDYQTKSCVATLEGHMSNVSFAV 235 (304)
T ss_dssp -----EEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred -----EEEEeCCCCccceeeCCCCCCEEEEE
Confidence 55554 35555555544333333333
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.13 E-value=8.8e-09 Score=103.00 Aligned_cols=163 Identities=12% Similarity=0.021 Sum_probs=97.2
Q ss_pred CCCceEEEccCCCeeEEecC-CC-----EEEEEEcCCcceEEEeecCCCCCC-C-CCCcccccccccccC--CcceEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVS-DG-----RIIKWHQDQRRWLHFARTSPNRDG-C-EGAYEYDHAAKEHIC--GRPLGLCF 103 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~-~~-----~i~~~d~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~--~~p~gi~~ 103 (359)
..+.+++++|||+.+++... ++ .|+.||..+++...........+. . ....+....+..... .....+++
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 35779999999997776665 66 899999988765544321100000 0 000000000000000 11356889
Q ss_pred ecCCCeEEEEeCCCcEEEEeCCCC---eEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCC
Q 018242 104 NKTNGDLYIADAYFGLLKVGPEGG---LATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKT 180 (359)
Q Consensus 104 ~~~~g~l~v~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~ 180 (359)
+|++..|+++.. +.|+.++.+++ +.+.+.. ....+..++++|||++|.++. .
T Consensus 117 SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~-----~~~~~~~~~~SPDG~~la~~~-------------------~ 171 (741)
T 2ecf_A 117 SPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTH-----GEGFATDAKLSPKGGFVSFIR-------------------G 171 (741)
T ss_dssp CTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCC-----SSSCEEEEEECTTSSEEEEEE-------------------T
T ss_pred CCCCCEEEEEeC-CcEEEEECCCCCcceEEEccc-----CCcccccccCCCCCCEEEEEe-------------------C
Confidence 994455666554 67999999887 5443321 113467899999999665552 2
Q ss_pred ceEEEEeCCCCcEEEEeCCCCC-----------------CceEEEccCCCEEEEEecC
Q 018242 181 GRLMKYDPATKQVTVLLGNLSF-----------------PNGVALSEDGNYILLAETT 221 (359)
Q Consensus 181 g~v~~~d~~~~~~~~~~~~~~~-----------------p~gia~~~d~~~l~v~~~~ 221 (359)
+.|+.+|.++++...+...... +.+++++|||+.|+++...
T Consensus 172 ~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d 229 (741)
T 2ecf_A 172 RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARID 229 (741)
T ss_dssp TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEE
T ss_pred CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEc
Confidence 3699999988776654332211 4779999999988777543
No 142
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.13 E-value=5e-08 Score=94.81 Aligned_cols=279 Identities=11% Similarity=0.010 Sum_probs=159.9
Q ss_pred CCCCceEEEccCCCeeEEecCCCEEEEEEcCCc----ceEEEeecCCCCCCCCCCcccccccccccCCc-ceEEEEec--
Q 018242 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQR----RWLHFARTSPNRDGCEGAYEYDHAAKEHICGR-PLGLCFNK-- 105 (359)
Q Consensus 33 ~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~gi~~~~-- 105 (359)
...+.+++++|+|+++.++. ++.|..||..++ +... .+...... ...+++++
T Consensus 18 ~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~--------------------~~~~h~~~~v~~~~~sp~~ 76 (615)
T 1pgu_A 18 RNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVV--------------------QFTGHGSSVVTTVKFSPIK 76 (615)
T ss_dssp TTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEE--------------------EECTTTTSCEEEEEECSST
T ss_pred cCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccce--------------------EEecCCCceEEEEEECcCC
Confidence 34677999999999666665 689999998865 2211 22233345 67899998
Q ss_pred CCCeEEEEeCCCcEEEEeCCCC------eEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCC
Q 018242 106 TNGDLYIADAYFGLLKVGPEGG------LATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDK 179 (359)
Q Consensus 106 ~~g~l~v~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~ 179 (359)
++..|+.+...+.|..++..++ ..+.... ... ....+..++++++|+++.++... ...
T Consensus 77 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~-~~~-~~~~v~~~~~s~~~~~l~~~~~~--------------~~~ 140 (615)
T 1pgu_A 77 GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSE-FQV-LAGPISDISWDFEGRRLCVVGEG--------------RDN 140 (615)
T ss_dssp TCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEE-EEC-CSSCEEEEEECTTSSEEEEEECC--------------SSC
T ss_pred CCCEEEEecCCCEEEEEeCCCCcccccccccccch-hhc-ccccEEEEEEeCCCCEEEEeccC--------------CCC
Confidence 7777777766556888888644 2222111 111 12357789999999955555221 012
Q ss_pred CceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCC---CCCceEECCC
Q 018242 180 TGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPG---FPDNIKRSPR 256 (359)
Q Consensus 180 ~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~p~~i~~d~~ 256 (359)
.+.|+.+|.. .....+.........++++|+++.++++...++.|..|++...+ ....+..... ....++++++
T Consensus 141 ~~~v~~~d~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~--~~~~~~~~~~~~~~v~~~~~~~~ 217 (615)
T 1pgu_A 141 FGVFISWDSG-NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK--FSASDRTHHKQGSFVRDVEFSPD 217 (615)
T ss_dssp SEEEEETTTC-CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE--EEEEECSSSCTTCCEEEEEECST
T ss_pred ccEEEEEECC-CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc--eeeeecccCCCCceEEEEEECCC
Confidence 3578888843 34444444445567899999998667777788999999965431 1112222222 3456899999
Q ss_pred -CCEEEEEecCCCccccccccCC-ccceeeecC-C---ccceeeeeecccccCc-------ceEEEEECCC-CCEEEEEE
Q 018242 257 -GGFWVGIHSRRKGISKLVLSFP-WIGNVLIKL-P---IDIVKIHSSLVKLSGN-------GGMAMRISEQ-GNVLEILE 322 (359)
Q Consensus 257 -G~lwv~~~~~~~~~~~~~~~~~-~~g~~~~~~-~---~~~~~~~~~~~~~~~~-------~~~~~~~~~~-g~~~~~~~ 322 (359)
|++.++....+. +..++ ..++.+..+ . .....+..+.+. ... .+.+..++.+ ++.+..+.
T Consensus 218 ~~~~l~~~~~dg~-----i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 291 (615)
T 1pgu_A 218 SGEFVITVGSDRK-----ISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWT 291 (615)
T ss_dssp TCCEEEEEETTCC-----EEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEeCCCe-----EEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 886665554443 55555 466766666 3 333444444443 222 0223333422 33444443
Q ss_pred ccCCceeeceEEEE-EeCCEEEEecCCCCeEEEEcCC
Q 018242 323 EIGRKMWRSISEVE-EKDGNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 323 ~~~g~~~~~~~~~~-~~~g~l~ig~~~~~~l~~~~~~ 358 (359)
.........+..+. ..+..+..++. +..|.++++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~l~~~~~-~g~i~~~d~~ 327 (615)
T 1pgu_A 292 LDKQQLGNQQVGVVATGNGRIISLSL-DGTLNFYELG 327 (615)
T ss_dssp CCTTCGGGCEEEEEEEETTEEEEEET-TSCEEEEETT
T ss_pred CCCCcccCceeEEEeCCCCeEEEEEC-CCCEEEEECC
Confidence 32111112222222 34666666665 6667777654
No 143
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.12 E-value=4.7e-08 Score=91.10 Aligned_cols=177 Identities=11% Similarity=0.016 Sum_probs=112.0
Q ss_pred CCCeeEEecC--C---CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCCC-
Q 018242 44 LGEGPYTGVS--D---GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYF- 117 (359)
Q Consensus 44 ~G~~l~~~~~--~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~~- 117 (359)
.+++++++.. + +.|+.||.++...+.+. ........++++|++..|+.+...+
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~---------------------~~~~~v~~~~~Spdg~~la~~s~~~~ 201 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVH---------------------RSPQPLMSPAWSPDGSKLAYVTFESG 201 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEE---------------------EESSCEEEEEECTTSSEEEEEECTTS
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEe---------------------CCCCcceeeEEcCCCCEEEEEEecCC
Confidence 3454555543 2 68999998865433332 2223467889999555566655443
Q ss_pred --cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEE
Q 018242 118 --GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTV 195 (359)
Q Consensus 118 --~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 195 (359)
.|+.+|.++++...+... ...+..++++|||++|+++... .....|+.+|..+++...
T Consensus 202 ~~~i~~~d~~tg~~~~l~~~-----~~~~~~~~~spdg~~la~~~~~---------------~g~~~i~~~d~~~~~~~~ 261 (415)
T 2hqs_A 202 RSALVIQTLANGAVRQVASF-----PRHNGAPAFSPDGSKLAFALSK---------------TGSLNLYVMDLASGQIRQ 261 (415)
T ss_dssp SCEEEEEETTTCCEEEEECC-----SSCEEEEEECTTSSEEEEEECT---------------TSSCEEEEEETTTCCEEE
T ss_pred CcEEEEEECCCCcEEEeecC-----CCcccCEEEcCCCCEEEEEEec---------------CCCceEEEEECCCCCEEe
Confidence 599999998876654321 1246688999999966655321 123469999998887766
Q ss_pred EeCCCCCCceEEEccCCCEEEEEecCCC--EEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEE-EEEe
Q 018242 196 LLGNLSFPNGVALSEDGNYILLAETTSC--RILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFW-VGIH 264 (359)
Q Consensus 196 ~~~~~~~p~gia~~~d~~~l~v~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lw-v~~~ 264 (359)
+.........++|+|||+.++++...++ .|+.+++..... ..+.........++++++|+.. ++..
T Consensus 262 l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~spdG~~l~~~~~ 330 (415)
T 2hqs_A 262 VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP---QRITWEGSQNQDADVSSDGKFMVMVSS 330 (415)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC---EECCCSSSEEEEEEECTTSSEEEEEEE
T ss_pred CcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE---EEEecCCCcccCeEECCCCCEEEEEEC
Confidence 5444445678999999998777764433 799998765422 2221122223458899999744 4443
No 144
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.12 E-value=4.7e-09 Score=95.77 Aligned_cols=208 Identities=12% Similarity=0.112 Sum_probs=116.4
Q ss_pred CCCCceEEEccC---CCeeEEecC--------CCEEEEEEcCCc--ceEEEeecCCCCCCCCCCcccccc-ccc---ccC
Q 018242 33 AIGPESLAFDAL---GEGPYTGVS--------DGRIIKWHQDQR--RWLHFARTSPNRDGCEGAYEYDHA-AKE---HIC 95 (359)
Q Consensus 33 ~~~p~~i~~~~~---G~~l~~~~~--------~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~ 95 (359)
..+|.+|+++|+ +..+|++.. ..+|.+++.+.+ .+..... ++ .+. ...
T Consensus 65 ~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~---------------i~~~~p~~~~~~ 129 (353)
T 2g8s_A 65 QGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRT---------------VFRQMPKLSTGN 129 (353)
T ss_dssp TCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEE---------------EEECSSCCBSSS
T ss_pred CCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEE---------------EEEECCCCCCCc
Confidence 346789999995 334776642 247888876532 1111100 00 011 122
Q ss_pred CcceEEEEecCCCeEEEEeCC--------------CcEEEEeCCCCe-------------EEEEeecCCCccccccceEE
Q 018242 96 GRPLGLCFNKTNGDLYIADAY--------------FGLLKVGPEGGL-------------ATAVATQSEGIPFRFCNSLD 148 (359)
Q Consensus 96 ~~p~gi~~~~~~g~l~v~~~~--------------~~i~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~ 148 (359)
+.+.+|++++ +|.||++... +.|+|+++++.. .+.+. ..+..|.+++
T Consensus 130 h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a-----~G~rnp~gl~ 203 (353)
T 2g8s_A 130 HFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWS-----YGIRNPQGMA 203 (353)
T ss_dssp CCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEE-----ECCSEEEEEE
T ss_pred ccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEE-----EcCcCccceE
Confidence 4467899999 8899999632 259999988641 11111 1345799999
Q ss_pred EeC-CCCEEEEEeCCCccccccceeeeeecCCCce--EE---EEeC----------CCCcEE--EEeCCCCCCceEEEcc
Q 018242 149 IDQ-STGIIYFTDSSSQFQRRNHISVILSGDKTGR--LM---KYDP----------ATKQVT--VLLGNLSFPNGVALSE 210 (359)
Q Consensus 149 ~d~-~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~--v~---~~d~----------~~~~~~--~~~~~~~~p~gia~~~ 210 (359)
+|+ +|+ ||+++.+.+. .+....+..+...|- .. .++. ..+... ........|.|+++..
T Consensus 204 ~d~~~g~-l~~~d~g~~~--~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~ 280 (353)
T 2g8s_A 204 MNPWSNA-LWLNEHGPRG--GDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYN 280 (353)
T ss_dssp EETTTTE-EEEEEECSBS--CEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEEC
T ss_pred EECCCCC-EEEEecCCCC--CcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEEC
Confidence 999 677 9999876321 000000000000000 00 0000 000000 0112224678899874
Q ss_pred C------CCEEEEEecCCCEEEEEEcCCCCCcceeEee-cCCCCCCceEECCCCCEEEEEe
Q 018242 211 D------GNYILLAETTSCRILRYWLKTSKAGTIEIVA-QLPGFPDNIKRSPRGGFWVGIH 264 (359)
Q Consensus 211 d------~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~p~~i~~d~~G~lwv~~~ 264 (359)
. ...+|+++...++|+++++++.+....+.+. .....|.+++++++|.||+++.
T Consensus 281 g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td 341 (353)
T 2g8s_A 281 SDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTD 341 (353)
T ss_dssp CSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEEC
T ss_pred CccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEe
Confidence 2 1359999999999999998753222222232 2345789999999999999865
No 145
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.12 E-value=1.7e-07 Score=86.27 Aligned_cols=277 Identities=11% Similarity=-0.014 Sum_probs=149.6
Q ss_pred CCCceEEEccCCC-eeEEecCCCEEEEEEc----CCcce-------EEEeecCCCCCCCCCCcccccccccccCCcceEE
Q 018242 34 IGPESLAFDALGE-GPYTGVSDGRIIKWHQ----DQRRW-------LHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGL 101 (359)
Q Consensus 34 ~~p~~i~~~~~G~-~l~~~~~~~~i~~~d~----~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi 101 (359)
....+++++|+|+ +++++..++.|..|+. .+++. ..+..+ ... . ............+
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~-------~~~~~~~~~v~~~ 114 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHP--FAL--S-------ASSGKTTNQVTCL 114 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECC--CCC--C-------------CBCEEEE
T ss_pred CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccc--ccc--c-------ccccCCCCceEEE
Confidence 4677999999999 8999999999999999 76541 111100 000 0 0000112346789
Q ss_pred EEecCCCeEEEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCc
Q 018242 102 CFNKTNGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTG 181 (359)
Q Consensus 102 ~~~~~~g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g 181 (359)
++++++..|+++...+.|..++..+.....+.. ....+..+++++++++++.+ ...+
T Consensus 115 ~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~------------------~~d~ 171 (425)
T 1r5m_A 115 AWSHDGNSIVTGVENGELRLWNKTGALLNVLNF-----HRAPIVSVKWNKDGTHIISM------------------DVEN 171 (425)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTSCEEEEECC-----CCSCEEEEEECTTSSEEEEE------------------ETTC
T ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccC-----CCccEEEEEECCCCCEEEEE------------------ecCC
Confidence 999944455555655568888965554443321 12357789999999955554 2245
Q ss_pred eEEEEeCCCCcEEEEeCC-CCC---------------CceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCC
Q 018242 182 RLMKYDPATKQVTVLLGN-LSF---------------PNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLP 245 (359)
Q Consensus 182 ~v~~~d~~~~~~~~~~~~-~~~---------------p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 245 (359)
.|..||..+++....... ... ...+++.+++ .+++...++.|..|++..... ...+....
T Consensus 172 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~~--~~~~~~~~ 247 (425)
T 1r5m_A 172 VTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKTP--TGKLIGHH 247 (425)
T ss_dssp CEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSSC--SEEECCCS
T ss_pred eEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCce--eeeeccCC
Confidence 788888877655433221 111 5678888876 356666778999999865422 12222222
Q ss_pred CCCCceEECCCCCEEEEEecCCCccccccccCC-ccceeeecCCccceeeeeecccc-------cCcceEEEEECCC-CC
Q 018242 246 GFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFP-WIGNVLIKLPIDIVKIHSSLVKL-------SGNGGMAMRISEQ-GN 316 (359)
Q Consensus 246 ~~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-g~ 316 (359)
.....++++++|++.++....+. +..++ ..++....+......+..+.+.. ..+ ..+..++.+ +.
T Consensus 248 ~~i~~~~~~~~~~~l~~~~~d~~-----i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d-~~i~i~d~~~~~ 321 (425)
T 1r5m_A 248 GPISVLEFNDTNKLLLSASDDGT-----LRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMD-GSVRLWSLKQNT 321 (425)
T ss_dssp SCEEEEEEETTTTEEEEEETTSC-----EEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETT-SEEEEEETTTTE
T ss_pred CceEEEEECCCCCEEEEEcCCCE-----EEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCC-CcEEEEECCCCc
Confidence 33456888999986665554443 45554 34444444433222333332221 111 233344432 33
Q ss_pred EEEEEEccCCceeeceEEEEEe-CCEEEEecCCCCeEEEEcCC
Q 018242 317 VLEILEEIGRKMWRSISEVEEK-DGNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 317 ~~~~~~~~~g~~~~~~~~~~~~-~g~l~ig~~~~~~l~~~~~~ 358 (359)
.+..+.... ..+..+... ++++++....+..|.++++.
T Consensus 322 ~~~~~~~~~----~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 322 LLALSIVDG----VPIFAGRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp EEEEEECTT----CCEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred EeEecccCC----ccEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 333333221 133344433 44444444446678887753
No 146
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.11 E-value=9.5e-08 Score=86.32 Aligned_cols=189 Identities=13% Similarity=0.028 Sum_probs=124.0
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcc--eEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRR--WLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI 112 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v 112 (359)
...+++++|+|+.+.++..++.+..|+..+.+ ..... .+.........+.+.+ ++.++.
T Consensus 99 ~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~------------------~~~~h~~~v~~~~~~~-~~~l~s 159 (340)
T 1got_B 99 WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSR------------------ELAGHTGYLSCCRFLD-DNQIVT 159 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEE------------------EEECCSSCEEEEEEEE-TTEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEE------------------EecCCCccEEEEEECC-CCcEEE
Confidence 34578899999988888999999999987642 11110 1122223456677887 778777
Q ss_pred EeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCc
Q 018242 113 ADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQ 192 (359)
Q Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 192 (359)
+...+.|..+|..+++...... + ....+..++++|+++ ++++- +..+.|..||..++.
T Consensus 160 ~s~d~~i~~wd~~~~~~~~~~~---~-h~~~v~~~~~~~~~~-~l~sg-----------------~~d~~v~~wd~~~~~ 217 (340)
T 1got_B 160 SSGDTTCALWDIETGQQTTTFT---G-HTGDVMSLSLAPDTR-LFVSG-----------------ACDASAKLWDVREGM 217 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEEC---C-CSSCEEEEEECTTSS-EEEEE-----------------ETTSCEEEEETTTCS
T ss_pred EECCCcEEEEECCCCcEEEEEc---C-CCCceEEEEECCCCC-EEEEE-----------------eCCCcEEEEECCCCe
Confidence 7766668899998886543222 1 123567899999999 66652 235678899987766
Q ss_pred EEEE-eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec--CCCCCCceEECCCCCEEEEEecCC
Q 018242 193 VTVL-LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ--LPGFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 193 ~~~~-~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
.... .........++++|+++. +++...++.|..||+.... ....+.. .......++++++|++.++....+
T Consensus 218 ~~~~~~~h~~~v~~v~~~p~~~~-l~s~s~d~~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~ 292 (340)
T 1got_B 218 CRQTFTGHESDINAICFFPNGNA-FATGSDDATCRLFDLRADQ--ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEEcCCcCCEEEEEEcCCCCE-EEEEcCCCcEEEEECCCCc--EEEEEccCCcccceEEEEECCCCCEEEEECCCC
Confidence 5433 334445688999999984 5566678899999986432 1111211 111234578999998777665544
No 147
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.11 E-value=1.8e-08 Score=92.15 Aligned_cols=198 Identities=10% Similarity=-0.028 Sum_probs=108.5
Q ss_pred EEEEeeCCCCCCceEEEccCCCeeEEecC----------CCEEEEEEcCCcceEE-EeecCCCCCCCCCCcccccccccc
Q 018242 25 VVQYQIEGAIGPESLAFDALGEGPYTGVS----------DGRIIKWHQDQRRWLH-FARTSPNRDGCEGAYEYDHAAKEH 93 (359)
Q Consensus 25 ~~~~~~~~~~~p~~i~~~~~G~~l~~~~~----------~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 93 (359)
+-+++.+ ..|+ ++++|||+.+|++.. .+.|..||..+.+... +..+... ...
T Consensus 72 ~~~I~vG--~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~--------------r~~ 134 (386)
T 3sjl_D 72 IGMIDGG--FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAP--------------RFL 134 (386)
T ss_dssp EEEEEEC--SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC--------------CCC
T ss_pred EEEEECC--CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcc--------------ccc
Confidence 3367776 4686 999999999998762 3579999998875432 2110000 001
Q ss_pred cCCcceEEEEecCCCeEEEEeC--CCcEEEEeCCCCeEEEEeecCCCccccccce----EEEeCCCCEEEEEeCCCcccc
Q 018242 94 ICGRPLGLCFNKTNGDLYIADA--YFGLLKVGPEGGLATAVATQSEGIPFRFCNS----LDIDQSTGIIYFTDSSSQFQR 167 (359)
Q Consensus 94 ~~~~p~gi~~~~~~g~l~v~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~d~~g~~l~v~d~~~~~~~ 167 (359)
....|.++++++++..+|+++. .+.|..+|..++++...... ++.....|.+ ++..+||+.+|++ ..
T Consensus 135 ~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v-~g~~~~~P~g~~~~~~~~~DG~~~~v~-~~----- 207 (386)
T 3sjl_D 135 VGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV-PDCYHIFPTAPDTFFMHCRDGSLAKVA-FG----- 207 (386)
T ss_dssp BSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC-CSEEEEEEEETTEEEEEETTSCEEEEE-CC-----
T ss_pred cCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC-CCcceeecCCCceeEEECCCCCEEEEE-CC-----
Confidence 1236889999997788999985 35699999999886543321 1111112222 3566777744444 11
Q ss_pred ccceeeeeecCCCceEEEEeCCCCcEEEEeCCCCCC--ceEEEc-cCCCEEEEEecCCCEEEEEEcCCCCCc---ceeEe
Q 018242 168 RNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFP--NGVALS-EDGNYILLAETTSCRILRYWLKTSKAG---TIEIV 241 (359)
Q Consensus 168 ~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p--~gia~~-~d~~~l~v~~~~~~~i~~~~~~~~~~~---~~~~~ 241 (359)
..+.+.. ..+ ..+ .....| +..+|+ ++|+.+|++. +++++.+|..++... ....+
T Consensus 208 -----------~~g~v~~--~~~---~~~-~~~~~~~~~~~~~~~~dG~~~~vs~--~g~V~v~d~~~~~~~v~~~~~~~ 268 (386)
T 3sjl_D 208 -----------TEGTPEI--THT---EVF-HPEDEFLINHPAYSQKAGRLVWPTY--TGKIHQIDLSSGDAKFLPAVEAL 268 (386)
T ss_dssp -----------SSSCCEE--EEC---CCC-SCTTSCBCSCCEEETTTTEEEEEBT--TSEEEEEECTTSSCEECCCEESS
T ss_pred -----------CCCeEEE--eec---cee-ccccccccccceeEcCCCcEEEEeC--CCEEEEEECCCCcceeecceecc
Confidence 1122211 000 001 001111 223554 6776555543 678999998654321 11111
Q ss_pred ec----CCCCC---CceEECCCC-CEEEEEec
Q 018242 242 AQ----LPGFP---DNIKRSPRG-GFWVGIHS 265 (359)
Q Consensus 242 ~~----~~~~p---~~i~~d~~G-~lwv~~~~ 265 (359)
.. ..-.| ..+++++++ ++|++...
T Consensus 269 ~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~ 300 (386)
T 3sjl_D 269 TEAERADGWRPGGWQQVAYHRALDRIYLLVDQ 300 (386)
T ss_dssp CHHHHHTTEEECSSSCEEEETTTTEEEEEEEE
T ss_pred ccccccccccCCCcceeeECCCCCeEEEEecc
Confidence 11 11123 348888876 59998753
No 148
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.11 E-value=1.7e-07 Score=84.91 Aligned_cols=196 Identities=13% Similarity=0.031 Sum_probs=118.7
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEe
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIAD 114 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~ 114 (359)
.-..++++|+|+++.++..++.|..||..++++..... ...........+++++++..|..+.
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~-----------------~~~~h~~~v~~~~~sp~g~~l~s~s 80 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSV-----------------LSEGHQRTVRKVAWSPCGNYLASAS 80 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEE-----------------ECSSCSSCEEEEEECTTSSEEEEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeee-----------------eccccCCcEEEEEECCCCCEEEEEE
Confidence 34589999999988888999999999988764321110 1112223467899999444455555
Q ss_pred CCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCc-E
Q 018242 115 AYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQ-V 193 (359)
Q Consensus 115 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~-~ 193 (359)
..+.+..++..++..+.+.. ..+ ....+..++++|+|+ +.++- +..+.|..+|..++. .
T Consensus 81 ~D~~v~iw~~~~~~~~~~~~-~~~-h~~~v~~v~~sp~~~-~l~s~-----------------s~D~~v~iwd~~~~~~~ 140 (345)
T 3fm0_A 81 FDATTCIWKKNQDDFECVTT-LEG-HENEVKSVAWAPSGN-LLATC-----------------SRDKSVWVWEVDEEDEY 140 (345)
T ss_dssp TTSCEEEEEECCC-EEEEEE-ECC-CSSCEEEEEECTTSS-EEEEE-----------------ETTSCEEEEEECTTSCE
T ss_pred CCCcEEEEEccCCCeEEEEE-ccC-CCCCceEEEEeCCCC-EEEEE-----------------ECCCeEEEEECCCCCCe
Confidence 55557778877665432221 111 123577899999999 54441 234567777765432 1
Q ss_pred E---EEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCCC
Q 018242 194 T---VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRK 268 (359)
Q Consensus 194 ~---~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~ 268 (359)
. .+.........++++|+++. +++...++.|..|+...........+.........++++++|++.++....+.
T Consensus 141 ~~~~~~~~h~~~v~~~~~~p~~~~-l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~ 217 (345)
T 3fm0_A 141 ECVSVLNSHTQDVKHVVWHPSQEL-LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT 217 (345)
T ss_dssp EEEEEECCCCSCEEEEEECSSSSC-EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEEecCcCCCeEEEEECCCCCE-EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe
Confidence 1 22233344678999999984 55566778899998754321111112222233456899999987765555443
No 149
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.09 E-value=8.5e-08 Score=88.38 Aligned_cols=217 Identities=12% Similarity=0.060 Sum_probs=132.4
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEe
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIAD 114 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~ 114 (359)
...+++++++|++++++..++.|..||..+.....+ .........+++++++..++.+.
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~---------------------~~~~~~v~~~~~~~~~~~l~~~~ 168 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVL---------------------NFHRAPIVSVKWNKDGTHIISMD 168 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEE---------------------CCCCSCEEEEEECTTSSEEEEEE
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeec---------------------cCCCccEEEEEECCCCCEEEEEe
Confidence 456899999999888999999999999554422222 22234467899999555566666
Q ss_pred CCCcEEEEeCCCCeEEEEeecCCCc-----------cccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceE
Q 018242 115 AYFGLLKVGPEGGLATAVATQSEGI-----------PFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRL 183 (359)
Q Consensus 115 ~~~~i~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 183 (359)
..+.|..++..+++........... ....+..+.+.+++. ++++ ...+.|
T Consensus 169 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------------------~~~g~i 229 (425)
T 1r5m_A 169 VENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIP------------------GPKGAI 229 (425)
T ss_dssp TTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTE-EEEE------------------CGGGCE
T ss_pred cCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEE------------------cCCCeE
Confidence 6666899999887654332211100 001166788888876 6655 335679
Q ss_pred EEEeCCCCcEEE-EeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEE
Q 018242 184 MKYDPATKQVTV-LLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVG 262 (359)
Q Consensus 184 ~~~d~~~~~~~~-~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~ 262 (359)
..+|..+++... +.........++++++++.++ +...++.|..|++..... ...+.........+++.++| ++++
T Consensus 230 ~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~~-~l~~ 305 (425)
T 1r5m_A 230 FVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLL-SASDDGTLRIWHGGNGNS--QNCFYGHSQSIVSASWVGDD-KVIS 305 (425)
T ss_dssp EEEETTCSSCSEEECCCSSCEEEEEEETTTTEEE-EEETTSCEEEECSSSBSC--SEEECCCSSCEEEEEEETTT-EEEE
T ss_pred EEEEcCCCceeeeeccCCCceEEEEECCCCCEEE-EEcCCCEEEEEECCCCcc--ceEecCCCccEEEEEECCCC-EEEE
Confidence 999987654433 223334457899999998544 455678899999764321 22222223334668888888 4444
Q ss_pred EecCCCccccccccCC-ccceeeecCCccceeeeeeccc
Q 018242 263 IHSRRKGISKLVLSFP-WIGNVLIKLPIDIVKIHSSLVK 300 (359)
Q Consensus 263 ~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~ 300 (359)
....+. +..++ ..++.+..+......+..+.+.
T Consensus 306 ~~~d~~-----i~i~d~~~~~~~~~~~~~~~~i~~~~~s 339 (425)
T 1r5m_A 306 CSMDGS-----VRLWSLKQNTLLALSIVDGVPIFAGRIS 339 (425)
T ss_dssp EETTSE-----EEEEETTTTEEEEEEECTTCCEEEEEEC
T ss_pred EeCCCc-----EEEEECCCCcEeEecccCCccEEEEEEc
Confidence 444443 55554 3566655554433344444443
No 150
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.08 E-value=2.8e-08 Score=91.72 Aligned_cols=222 Identities=11% Similarity=0.021 Sum_probs=132.9
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCc--ceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQR--RWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI 112 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v 112 (359)
...+++++++|++++++..++.|..||..+. ...... .+.........++++++++++++
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~------------------~~~~h~~~v~~~~~~~~~~~~l~ 130 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMA------------------RFSNHSSSVKTVKFNAKQDNVLA 130 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEE------------------ECCCSSSCCCEEEECSSSTTBEE
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchh------------------hccCCccceEEEEEcCCCCCEEE
Confidence 3458999999998888888999999998761 010110 22223345678999995355555
Q ss_pred E-eCCCcEEEEeCCCCe------EEEEeecCCCccccccceEEEeCC-CCEEEEEeCCCccccccceeeeeecCCCceEE
Q 018242 113 A-DAYFGLLKVGPEGGL------ATAVATQSEGIPFRFCNSLDIDQS-TGIIYFTDSSSQFQRRNHISVILSGDKTGRLM 184 (359)
Q Consensus 113 ~-~~~~~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~d~~-g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 184 (359)
+ ...+.|..+|..+++ ......... .....+..++++++ ++ ++++- ...+.|.
T Consensus 131 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~-~l~~~-----------------~~dg~v~ 191 (416)
T 2pm9_A 131 SGGNNGEIFIWDMNKCTESPSNYTPLTPGQSM-SSVDEVISLAWNQSLAH-VFASA-----------------GSSNFAS 191 (416)
T ss_dssp EECSSSCEEBCBTTTTSSCTTTCCCBCCCCSC-CSSCCCCEEEECSSCTT-EEEEE-----------------SSSSCEE
T ss_pred EEcCCCeEEEEECCCCcccccccccccccccc-CCCCCeeEEEeCCCCCc-EEEEE-----------------cCCCCEE
Confidence 4 444458888988764 111111011 12235778999999 56 55552 2356799
Q ss_pred EEeCCCCcEEEEeCC-------CCCCceEEEccCCCEEEEEecCCC---EEEEEEcCCCCCcceeEee-cCCCCCCceEE
Q 018242 185 KYDPATKQVTVLLGN-------LSFPNGVALSEDGNYILLAETTSC---RILRYWLKTSKAGTIEIVA-QLPGFPDNIKR 253 (359)
Q Consensus 185 ~~d~~~~~~~~~~~~-------~~~p~gia~~~d~~~l~v~~~~~~---~i~~~~~~~~~~~~~~~~~-~~~~~p~~i~~ 253 (359)
.||..+++....... ......++++|++..++++...++ .|..|++...... ...+. ........+++
T Consensus 192 iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~-~~~~~~~~~~~v~~~~~ 270 (416)
T 2pm9_A 192 IWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP-LQTLNQGHQKGILSLDW 270 (416)
T ss_dssp EEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC-SBCCCSCCSSCEEEEEE
T ss_pred EEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC-cEEeecCccCceeEEEe
Confidence 999887665443322 344678999999855666666776 8999998653211 11222 12223456888
Q ss_pred CC-CCCEEEEEecCCCccccccccCC-ccceeeecCCccceeeeeecc
Q 018242 254 SP-RGGFWVGIHSRRKGISKLVLSFP-WIGNVLIKLPIDIVKIHSSLV 299 (359)
Q Consensus 254 d~-~G~lwv~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~ 299 (359)
++ +|++.++....+. +..++ ..++.+..+......+..+.+
T Consensus 271 s~~~~~~l~s~~~dg~-----v~~wd~~~~~~~~~~~~~~~~v~~~~~ 313 (416)
T 2pm9_A 271 CHQDEHLLLSSGRDNT-----VLLWNPESAEQLSQFPARGNWCFKTKF 313 (416)
T ss_dssp CSSCSSCEEEEESSSE-----EEEECSSSCCEEEEEECSSSCCCCEEE
T ss_pred CCCCCCeEEEEeCCCC-----EEEeeCCCCccceeecCCCCceEEEEE
Confidence 88 7876665554443 55554 356665555443333333333
No 151
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.08 E-value=6.5e-08 Score=88.86 Aligned_cols=200 Identities=12% Similarity=-0.008 Sum_probs=115.2
Q ss_pred CCCceEEEccCCCeeEEecC--CCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEE
Q 018242 34 IGPESLAFDALGEGPYTGVS--DGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLY 111 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~ 111 (359)
..|++++++|||+.+|++.. .+.|..+| .+++... .+. ..+.++.+.+.+.+.|
T Consensus 125 ~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~--------------------~~i---~~~~~~~~~~~~~~~~ 180 (373)
T 2mad_H 125 PYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDD--------------------QLL---SSPTCYHIHPGAPSTF 180 (373)
T ss_pred CCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEe--------------------EEc---CCCceEEEEeCCCceE
Confidence 56999999999999998864 47899999 8774321 100 1122344455456677
Q ss_pred EEeCCC-cEEEEeCCCCeEEEEeec----CCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEE
Q 018242 112 IADAYF-GLLKVGPEGGLATAVATQ----SEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKY 186 (359)
Q Consensus 112 v~~~~~-~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 186 (359)
++...+ .+..++. +++....... ....+ ......+.+++..+|+.. ..+.++.+
T Consensus 181 ~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~------------------~~~~v~vi 239 (373)
T 2mad_H 181 YLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQN--LLTQPAQANKSGRIVWPV------------------YSGKILQA 239 (373)
T ss_pred EEEcCCCCEEEEEC-CCcEEEEEeccccccCCcc--eeecceeEecCCEEEEEc------------------CCceEEEE
Confidence 765443 4777888 6554321110 00001 011233444444355552 13468888
Q ss_pred eCCCCcEEEEe----------CCCCCCce---EEEccCCCEEEEEecC---------CCEEEEEEcCCCCCcceeEeecC
Q 018242 187 DPATKQVTVLL----------GNLSFPNG---VALSEDGNYILLAETT---------SCRILRYWLKTSKAGTIEIVAQL 244 (359)
Q Consensus 187 d~~~~~~~~~~----------~~~~~p~g---ia~~~d~~~l~v~~~~---------~~~i~~~~~~~~~~~~~~~~~~~ 244 (359)
|..++..+... .....|.+ +++++|++.+|++... .+.|+++|.+..+ .......
T Consensus 240 d~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~---vv~~i~~ 316 (373)
T 2mad_H 240 DISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ---TSSQISL 316 (373)
T ss_pred eccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE---EEEEEEC
Confidence 87644322111 01123555 8899999999998652 4689999975432 1111235
Q ss_pred CCCCCceEECCCCC-EEEEEe-cCCCccccccccCC-ccceeeec
Q 018242 245 PGFPDNIKRSPRGG-FWVGIH-SRRKGISKLVLSFP-WIGNVLIK 286 (359)
Q Consensus 245 ~~~p~~i~~d~~G~-lwv~~~-~~~~~~~~~~~~~~-~~g~~~~~ 286 (359)
++.|.++++++||+ +++++. ..+. +.+++ .++++++.
T Consensus 317 g~~p~~i~~s~Dg~~~l~v~~~~~~~-----V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 317 GHDVDAISVAQDGGPDLYALSAGTEV-----LHIYDAGAGDQDQS 356 (373)
T ss_pred CCCcCeEEECCCCCeEEEEEcCCCCe-----EEEEECCCCCEEee
Confidence 55799999999998 555554 4443 44443 46676666
No 152
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.07 E-value=1.1e-07 Score=87.83 Aligned_cols=152 Identities=13% Similarity=0.107 Sum_probs=102.4
Q ss_pred ceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC
Q 018242 37 ESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY 116 (359)
Q Consensus 37 ~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~ 116 (359)
.+++++++|++++++..++.|..||..+++... .+.........+++++++..|+.+...
T Consensus 127 ~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~--------------------~~~~h~~~v~~~~~~p~~~~l~s~s~d 186 (393)
T 1erj_A 127 RSVCFSPDGKFLATGAEDRLIRIWDIENRKIVM--------------------ILQGHEQDIYSLDYFPSGDKLVSGSGD 186 (393)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEE--------------------EECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE--------------------EEccCCCCEEEEEEcCCCCEEEEecCC
Confidence 478999999988888999999999998764322 122233446789999955555555555
Q ss_pred CcEEEEeCCCCeEEEEeecCCCccccccceEEEeC-CCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEE
Q 018242 117 FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQ-STGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTV 195 (359)
Q Consensus 117 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~-~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 195 (359)
+.|..+|..+++....... ...+..+++.+ +|+ ++++- ...+.|..||..++....
T Consensus 187 ~~v~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~-~l~~~-----------------s~d~~v~iwd~~~~~~~~ 243 (393)
T 1erj_A 187 RTVRIWDLRTGQCSLTLSI-----EDGVTTVAVSPGDGK-YIAAG-----------------SLDRAVRVWDSETGFLVE 243 (393)
T ss_dssp SEEEEEETTTTEEEEEEEC-----SSCEEEEEECSTTCC-EEEEE-----------------ETTSCEEEEETTTCCEEE
T ss_pred CcEEEEECCCCeeEEEEEc-----CCCcEEEEEECCCCC-EEEEE-----------------cCCCcEEEEECCCCcEEE
Confidence 5688899988875433221 12456788888 788 44441 235678889988765443
Q ss_pred Ee--------CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCC
Q 018242 196 LL--------GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKT 232 (359)
Q Consensus 196 ~~--------~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~ 232 (359)
.. ........++++|+++. +++...++.|..|++..
T Consensus 244 ~~~~~~~~~~~h~~~v~~v~~~~~g~~-l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 244 RLDSENESGTGHKDSVYSVVFTRDGQS-VVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp EEC------CCCSSCEEEEEECTTSSE-EEEEETTSEEEEEEC--
T ss_pred eecccccCCCCCCCCEEEEEECCCCCE-EEEEeCCCEEEEEECCC
Confidence 22 12234568999999985 55666788999999864
No 153
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.06 E-value=8.1e-07 Score=82.00 Aligned_cols=183 Identities=11% Similarity=-0.012 Sum_probs=121.2
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
....+++++++|+.++++..++.|..||..+++... .+.........+.++ +..++.+
T Consensus 135 ~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~--------------------~~~~~~~~v~~~~~~--~~~l~~~ 192 (401)
T 4aez_A 135 TYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLR--------------------TMAGHQARVGCLSWN--RHVLSSG 192 (401)
T ss_dssp CCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE--------------------EECCCSSCEEEEEEE--TTEEEEE
T ss_pred CCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEE--------------------EecCCCCceEEEEEC--CCEEEEE
Confidence 455689999999988899999999999988764322 122222345567774 4566666
Q ss_pred eCCCcEEEEeCCC-Ce-EEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCC
Q 018242 114 DAYFGLLKVGPEG-GL-ATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATK 191 (359)
Q Consensus 114 ~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 191 (359)
...+.|..+|... +. ...+.. ....+..+.++++|+++..+ +..+.|..||..++
T Consensus 193 ~~dg~i~i~d~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~------------------~~d~~v~iwd~~~~ 249 (401)
T 4aez_A 193 SRSGAIHHHDVRIANHQIGTLQG-----HSSEVCGLAWRSDGLQLASG------------------GNDNVVQIWDARSS 249 (401)
T ss_dssp ETTSEEEEEETTSSSCEEEEEEC-----CSSCEEEEEECTTSSEEEEE------------------ETTSCEEEEETTCS
T ss_pred cCCCCEEEEecccCcceeeEEcC-----CCCCeeEEEEcCCCCEEEEE------------------eCCCeEEEccCCCC
Confidence 6666688889873 32 222211 12356789999999944443 23467999998876
Q ss_pred cEEEE-eCCCCCCceEEEccCCCEEEEEec--CCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEe
Q 018242 192 QVTVL-LGNLSFPNGVALSEDGNYILLAET--TSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIH 264 (359)
Q Consensus 192 ~~~~~-~~~~~~p~gia~~~d~~~l~v~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~ 264 (359)
+.... .........++++|++..++++.. .++.|..|++..... ...+ ........++++++|+..++..
T Consensus 250 ~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~--~~~~-~~~~~v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 250 IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR--VNTV-DAGSQVTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE--EEEE-ECSSCEEEEEECSSSSEEEEEE
T ss_pred CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE--EEEE-eCCCcEEEEEECCCCCeEEEEe
Confidence 55433 334455789999998877777754 688999999865321 1222 2233356789999998777654
No 154
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.06 E-value=1.6e-08 Score=96.65 Aligned_cols=194 Identities=9% Similarity=-0.022 Sum_probs=123.9
Q ss_pred EeeCCCCCCceEEEc--cCCCeeEEec------------------CCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccc
Q 018242 28 YQIEGAIGPESLAFD--ALGEGPYTGV------------------SDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYD 87 (359)
Q Consensus 28 ~~~~~~~~p~~i~~~--~~G~~l~~~~------------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (359)
+.++...+|+++++. |+++.+|++. .++.+..+|.++.+...
T Consensus 128 i~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~------------------ 189 (595)
T 1fwx_A 128 LEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAW------------------ 189 (595)
T ss_dssp EECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEE------------------
T ss_pred EeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEE------------------
Confidence 345555789999984 8998888884 22577788888764321
Q ss_pred cccccccCCcceEEEEecCCCeEEEEeCCC--------------------------------------cEEEEeCCC--C
Q 018242 88 HAAKEHICGRPLGLCFNKTNGDLYIADAYF--------------------------------------GLLKVGPEG--G 127 (359)
Q Consensus 88 ~~~~~~~~~~p~gi~~~~~~g~l~v~~~~~--------------------------------------~i~~~~~~~--~ 127 (359)
+ ....++|.+++++++++.+|+++... ++..+|..+ +
T Consensus 190 --q-I~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~ 266 (595)
T 1fwx_A 190 --Q-VLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEAS 266 (595)
T ss_dssp --E-EEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGC
T ss_pred --E-EEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCC
Confidence 1 12224688899998777788876332 244445443 2
Q ss_pred eE-EEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCc------------EE
Q 018242 128 LA-TAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQ------------VT 194 (359)
Q Consensus 128 ~~-~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~------------~~ 194 (359)
++ ..... -...|+++.++|||+++|+++.. ...|..+|.++.+ +.
T Consensus 267 ~~~~~~Ip-----vg~~PhGv~~sPDGk~v~V~~~~-----------------s~~VsVid~~~~~~~~~~~l~~~~~v~ 324 (595)
T 1fwx_A 267 SLFTRYIP-----IANNPHGCNMAPDKKHLCVAGKL-----------------SPTVTVLDVTRFDAVFYENADPRSAVV 324 (595)
T ss_dssp CSSEEEEE-----EESSCCCEEECTTSSEEEEECTT-----------------SSBEEEEEGGGHHHHHHSCCCGGGGEE
T ss_pred ceeEEEEe-----cCCCceEEEEcCCCCEEEEeCCC-----------------CCeEEEEECcccccccccccCcccceE
Confidence 11 11111 11378999999999999999644 3468888876432 22
Q ss_pred EEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC-------CCcceeEeecCCCCC------CceEECCCCCEEE
Q 018242 195 VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS-------KAGTIEIVAQLPGFP------DNIKRSPRGGFWV 261 (359)
Q Consensus 195 ~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~~~p------~~i~~d~~G~lwv 261 (359)
........|.+++|++|| .+|++...+++|.+|+++.. +......-......| .++.+++||+..+
T Consensus 325 ~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~ 403 (595)
T 1fwx_A 325 AEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLV 403 (595)
T ss_dssp ECCBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEE
T ss_pred EEcCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEE
Confidence 222345789999999999 79999999999999998641 111111111122223 5678899998555
Q ss_pred EEec
Q 018242 262 GIHS 265 (359)
Q Consensus 262 ~~~~ 265 (359)
+...
T Consensus 404 ~~Nk 407 (595)
T 1fwx_A 404 CLSK 407 (595)
T ss_dssp EEES
T ss_pred EcCC
Confidence 5544
No 155
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.05 E-value=3.9e-07 Score=81.56 Aligned_cols=209 Identities=11% Similarity=0.038 Sum_probs=125.8
Q ss_pred CCceEEEccCC-CeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 35 GPESLAFDALG-EGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 35 ~p~~i~~~~~G-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
.-.++++.+++ ++++++..++.|..|+..+.....-. .+..+.........+++++++..++.+
T Consensus 19 ~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~---------------~~~~~~~h~~~v~~~~~s~dg~~l~s~ 83 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGV---------------PVRSFKGHSHIVQDCTLTADGAYALSA 83 (319)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEE---------------EEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred eEEEEEccCCCccEEEEecCCccEEEecCCCCCccccc---------------cceEEeCCcccEEEEEECCCCCEEEEE
Confidence 44578898865 77888999999999997543111000 000222233446688999944444455
Q ss_pred eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcE
Q 018242 114 DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQV 193 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 193 (359)
...+.|..+|..+++....... ....+..+.++++++ +.++- +..+.|..||.++...
T Consensus 84 s~D~~v~~wd~~~~~~~~~~~~----h~~~v~~~~~~~~~~-~l~s~-----------------s~D~~i~vwd~~~~~~ 141 (319)
T 3frx_A 84 SWDKTLRLWDVATGETYQRFVG----HKSDVMSVDIDKKAS-MIISG-----------------SRDKTIKVWTIKGQCL 141 (319)
T ss_dssp ETTSEEEEEETTTTEEEEEEEC----CSSCEEEEEECTTSC-EEEEE-----------------ETTSCEEEEETTSCEE
T ss_pred eCCCEEEEEECCCCCeeEEEcc----CCCcEEEEEEcCCCC-EEEEE-----------------eCCCeEEEEECCCCeE
Confidence 5555688899988875332221 123567899999999 55552 2356788888876555
Q ss_pred EEEeCCCCCCceEEEccCCC-----EEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCCC
Q 018242 194 TVLLGNLSFPNGVALSEDGN-----YILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRK 268 (359)
Q Consensus 194 ~~~~~~~~~p~gia~~~d~~-----~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~ 268 (359)
..+.........+++.|..+ ..+++...++.|..|++.... ....+.........++++++|++.++....+.
T Consensus 142 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~ 219 (319)
T 3frx_A 142 ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ--IEADFIGHNSNINTLTASPDGTLIASAGKDGE 219 (319)
T ss_dssp EEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE--EEEEECCCCSCEEEEEECTTSSEEEEEETTCE
T ss_pred EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch--hheeecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 55544444556777776432 256777788899999975431 11122222233456899999987776655554
Q ss_pred ccccccccCCc-cceeeecC
Q 018242 269 GISKLVLSFPW-IGNVLIKL 287 (359)
Q Consensus 269 ~~~~~~~~~~~-~g~~~~~~ 287 (359)
+..++. .++.+..+
T Consensus 220 -----i~iwd~~~~~~~~~~ 234 (319)
T 3frx_A 220 -----IMLWNLAAKKAMYTL 234 (319)
T ss_dssp -----EEEEETTTTEEEEEE
T ss_pred -----EEEEECCCCcEEEEe
Confidence 555543 45554444
No 156
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=99.04 E-value=4.7e-07 Score=82.36 Aligned_cols=200 Identities=9% Similarity=0.075 Sum_probs=126.3
Q ss_pred CCCCCceEEEc-cCCCeeEEecCC------CEEEEEEcCC--------cce-EEEeecCCCCCCCCCCcccccccccccC
Q 018242 32 GAIGPESLAFD-ALGEGPYTGVSD------GRIIKWHQDQ--------RRW-LHFARTSPNRDGCEGAYEYDHAAKEHIC 95 (359)
Q Consensus 32 ~~~~p~~i~~~-~~G~~l~~~~~~------~~i~~~d~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (359)
.-.-|.+++++ .+|+ +|++..+ -.+..++.++ ... +.|+ . +. . ....
T Consensus 24 ~n~~P~gv~vd~~~gR-iFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP--~--w~-----------~-~~~l 86 (381)
T 3q6k_A 24 DNMISTAFAYDAEGEK-LFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFS--G--HK-----------T-GKEL 86 (381)
T ss_dssp GGCCCCEEEEETTTTE-EEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECT--T--CS-----------S-SCSS
T ss_pred CccceeeeeeecCCCc-EEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCC--C--Cc-----------c-ccce
Confidence 34578899995 8888 8988865 2444554321 112 2221 0 00 0 1122
Q ss_pred CcceEEEEecCCCeEEEEeCC-------------C---cEEEEeCCCC--eEEEEeecCC--CccccccceEEEe-C--C
Q 018242 96 GRPLGLCFNKTNGDLYIADAY-------------F---GLLKVGPEGG--LATAVATQSE--GIPFRFCNSLDID-Q--S 152 (359)
Q Consensus 96 ~~p~gi~~~~~~g~l~v~~~~-------------~---~i~~~~~~~~--~~~~~~~~~~--~~~~~~~~~l~~d-~--~ 152 (359)
..+.++.+|+ .++|||-|.+ . .|+.+|++++ ++........ ..+....+++++| . +
T Consensus 87 vsV~~v~iD~-~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~ 165 (381)
T 3q6k_A 87 TSIYQPVIDD-CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPK 165 (381)
T ss_dssp SCEEEEEECT-TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTT
T ss_pred EEeeEEEEcC-CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCC
Confidence 3467899999 9999999864 1 3889999998 6544332111 1234578999999 2 2
Q ss_pred ----CCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCCC-------------------CCCceEEEc
Q 018242 153 ----TGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNL-------------------SFPNGVALS 209 (359)
Q Consensus 153 ----g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~-------------------~~p~gia~~ 209 (359)
+.++||+|.+ ..+|+++|..+++...+.+.. .+..||+++
T Consensus 166 ~~c~~~~aYItD~~-----------------~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLs 228 (381)
T 3q6k_A 166 GDCSETFVYITNFL-----------------RGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLG 228 (381)
T ss_dssp TTSCSEEEEEEETT-----------------TTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEEC
T ss_pred CCCCccEEEEEcCC-----------------CCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEec
Confidence 4569999875 346888888777665544210 244689999
Q ss_pred cC----CCEEEEEecCCCEEEEEEcC---CCC-CcceeEeecCCCCCC--ceEEC-CCCCEEEEEecC
Q 018242 210 ED----GNYILLAETTSCRILRYWLK---TSK-AGTIEIVAQLPGFPD--NIKRS-PRGGFWVGIHSR 266 (359)
Q Consensus 210 ~d----~~~l~v~~~~~~~i~~~~~~---~~~-~~~~~~~~~~~~~p~--~i~~d-~~G~lwv~~~~~ 266 (359)
|+ +++||+....+..+++...+ ... ....+.+.+.+...+ +++.| .+|+||++....
T Consensus 229 p~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~ 296 (381)
T 3q6k_A 229 DRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANT 296 (381)
T ss_dssp CCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSS
T ss_pred CCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccC
Confidence 98 88999999998899998742 222 223333333321234 36776 789999998754
No 157
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.04 E-value=7e-09 Score=94.74 Aligned_cols=195 Identities=9% Similarity=-0.047 Sum_probs=113.8
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEe
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIAD 114 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~ 114 (359)
.-.+++++|+|++++++..++.|..||..++.+.... .+.........+++++++..|+.+.
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~------------------~~~~h~~~v~~~~~s~~~~~l~s~s 74 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHAR------------------TFSDHDKIVTCVDWAPKSNRIVTCS 74 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECC------------------CBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEE------------------EEecCCceEEEEEEeCCCCEEEEEe
Confidence 5678999999997777778899999998876332221 2223334567899999544555556
Q ss_pred CCCcEEEEeCCCCe-EEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCc-
Q 018242 115 AYFGLLKVGPEGGL-ATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQ- 192 (359)
Q Consensus 115 ~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~- 192 (359)
..+.|..++..+++ ....... .. ....+..++++++|+++..+ ...+.|..+|.++++
T Consensus 75 ~d~~v~vwd~~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~------------------~~d~~i~iwd~~~~~~ 134 (377)
T 3dwl_C 75 QDRNAYVYEKRPDGTWKQTLVL-LR-LNRAATFVRWSPNEDKFAVG------------------SGARVISVCYFEQEND 134 (377)
T ss_dssp TTSSEEEC------CCCCEEEC-CC-CSSCEEEEECCTTSSCCEEE------------------ESSSCEEECCC-----
T ss_pred CCCeEEEEEcCCCCceeeeeEe-cc-cCCceEEEEECCCCCEEEEE------------------ecCCeEEEEEECCccc
Confidence 55568888887765 1111111 11 12356789999999845444 224568888877654
Q ss_pred ---EEEEeC-CCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCc-------------ceeEeecC--CCCCCceEE
Q 018242 193 ---VTVLLG-NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAG-------------TIEIVAQL--PGFPDNIKR 253 (359)
Q Consensus 193 ---~~~~~~-~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~-------------~~~~~~~~--~~~p~~i~~ 253 (359)
...+.. .......++++|+++. +++...++.|..|++...... ..+..... .+....+++
T Consensus 135 ~~~~~~~~~~h~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 213 (377)
T 3dwl_C 135 WWVSKHLKRPLRSTILSLDWHPNNVL-LAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGF 213 (377)
T ss_dssp CCCCEEECSSCCSCEEEEEECTTSSE-EEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEE
T ss_pred ceeeeEeecccCCCeEEEEEcCCCCE-EEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEE
Confidence 333433 3455678999999985 455556788999998532110 01111112 122455889
Q ss_pred CCCCCEEEEEecCCC
Q 018242 254 SPRGGFWVGIHSRRK 268 (359)
Q Consensus 254 d~~G~lwv~~~~~~~ 268 (359)
+++|++.++....+.
T Consensus 214 sp~~~~l~~~~~d~~ 228 (377)
T 3dwl_C 214 SPSGNALAYAGHDSS 228 (377)
T ss_dssp CTTSSCEEEEETTTE
T ss_pred CCCCCEEEEEeCCCc
Confidence 999986665544443
No 158
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.04 E-value=3.2e-07 Score=83.16 Aligned_cols=196 Identities=10% Similarity=0.049 Sum_probs=119.8
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecC--CCeEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKT--NGDLY 111 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~--~g~l~ 111 (359)
..-.+++++++|+++.++..++.|..||.......... .+.........++++++ +..++
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~------------------~~~~h~~~v~~~~~~~~~~~~~l~ 73 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLID------------------TLTGHEGPVWRVDWAHPKFGTILA 73 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEE------------------EECCCSSCEEEEEECCGGGCSEEE
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeee------------------EecCCCCcEEEEEeCCCCCCCEEE
Confidence 35568999999998888888999999998744332221 22223344678888763 34455
Q ss_pred EEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCC--CCEEEEEeCCCccccccceeeeeecCCCceEEEEeCC
Q 018242 112 IADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQS--TGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPA 189 (359)
Q Consensus 112 v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~--g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 189 (359)
.+...+.|..++..+++...+..... ....+..++++++ ++.++++ ...+.|..||..
T Consensus 74 s~~~dg~v~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~------------------~~d~~i~v~d~~ 133 (379)
T 3jrp_A 74 SCSYDGKVLIWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPLLLVA------------------SSDGKVSVVEFK 133 (379)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEEE------------------ETTSEEEEEECC
T ss_pred EeccCCEEEEEEcCCCceeEeeeecC--CCcceEEEEeCCCCCCCEEEEe------------------cCCCcEEEEecC
Confidence 55555568888988886433222111 1235778999999 8844444 234678888876
Q ss_pred CCc---EEEEeCCCCCCceEEEcc-------------CCCEEEEEecCCCEEEEEEcCCCCCcc-e-eEeecCCCCCCce
Q 018242 190 TKQ---VTVLLGNLSFPNGVALSE-------------DGNYILLAETTSCRILRYWLKTSKAGT-I-EIVAQLPGFPDNI 251 (359)
Q Consensus 190 ~~~---~~~~~~~~~~p~gia~~~-------------d~~~l~v~~~~~~~i~~~~~~~~~~~~-~-~~~~~~~~~p~~i 251 (359)
++. ...+.........++++| +++ ++++...++.|..|++....... . ..+.........+
T Consensus 134 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~ 212 (379)
T 3jrp_A 134 ENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV 212 (379)
T ss_dssp TTSCCCEEEEECCTTCEEEEEECCCC----------CTTC-EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred CCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEE
Confidence 552 222233344567888988 576 45556677899999986542211 1 1111122334568
Q ss_pred EECCC---CCEEEEEecCCC
Q 018242 252 KRSPR---GGFWVGIHSRRK 268 (359)
Q Consensus 252 ~~d~~---G~lwv~~~~~~~ 268 (359)
+++++ |++.++....+.
T Consensus 213 ~~sp~~~~~~~l~s~~~dg~ 232 (379)
T 3jrp_A 213 AWSPTVLLRSYLASVSQDRT 232 (379)
T ss_dssp EECCCCSSSEEEEEEETTSC
T ss_pred EECCCCCCCCeEEEEeCCCE
Confidence 99998 776665555443
No 159
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.04 E-value=9e-08 Score=96.48 Aligned_cols=216 Identities=8% Similarity=0.045 Sum_probs=135.8
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
....+++++|+|+.+.++..++.|..||..+++... .+.........+++++++..|.++
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~--------------------~~~~~~~~v~~~~~s~~~~~l~~~ 73 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVR--------------------SIQVTETPVRAGKFIARKNWIIVG 73 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE--------------------EEECCSSCEEEEEEEGGGTEEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEE--------------------EEecCCCcEEEEEEeCCCCEEEEE
Confidence 467899999999988888889999999987763222 122233446789999955556666
Q ss_pred eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCC-c
Q 018242 114 DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATK-Q 192 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~-~ 192 (359)
...+.|..++..+++....... ....+..++++|+|+++..+ ...+.|..|+.+++ .
T Consensus 74 ~~dg~i~vw~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~------------------~~dg~i~vw~~~~~~~ 131 (814)
T 3mkq_A 74 SDDFRIRVFNYNTGEKVVDFEA----HPDYIRSIAVHPTKPYVLSG------------------SDDLTVKLWNWENNWA 131 (814)
T ss_dssp ETTSEEEEEETTTCCEEEEEEC----CSSCEEEEEECSSSSEEEEE------------------ETTSEEEEEEGGGTSE
T ss_pred eCCCeEEEEECCCCcEEEEEec----CCCCEEEEEEeCCCCEEEEE------------------cCCCEEEEEECCCCce
Confidence 6555688999887765432221 12356789999999945444 23467888887765 3
Q ss_pred EEE-EeCCCCCCceEEEcc-CCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-CCCCCCceEECC--CCCEEEEEecCC
Q 018242 193 VTV-LLGNLSFPNGVALSE-DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSP--RGGFWVGIHSRR 267 (359)
Q Consensus 193 ~~~-~~~~~~~p~gia~~~-d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~--~G~lwv~~~~~~ 267 (359)
... +.........++++| +++ .+++...++.|..|++..... ...+.. .......+++.+ +|.+.++....+
T Consensus 132 ~~~~~~~~~~~v~~~~~~p~~~~-~l~~~~~dg~v~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg 208 (814)
T 3mkq_A 132 LEQTFEGHEHFVMCVAFNPKDPS-TFASGCLDRTVKVWSLGQSTP--NFTLTTGQERGVNYVDYYPLPDKPYMITASDDL 208 (814)
T ss_dssp EEEEEECCSSCEEEEEEETTEEE-EEEEEETTSEEEEEETTCSSC--SEEEECCCTTCCCEEEECCSTTCCEEEEECTTS
T ss_pred EEEEEcCCCCcEEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcc--eeEEecCCCCCEEEEEEEECCCCCEEEEEeCCC
Confidence 332 333344567899999 665 566666788999999865422 112222 223355678877 787666555544
Q ss_pred CccccccccCC-ccceeeecCCccceeeeeecc
Q 018242 268 KGISKLVLSFP-WIGNVLIKLPIDIVKIHSSLV 299 (359)
Q Consensus 268 ~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~ 299 (359)
. +..++ ..++....+..+...+..+.+
T Consensus 209 ~-----i~~~d~~~~~~~~~~~~~~~~v~~~~~ 236 (814)
T 3mkq_A 209 T-----IKIWDYQTKSCVATLEGHMSNVSFAVF 236 (814)
T ss_dssp E-----EEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred E-----EEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 3 44444 345555554433333433333
No 160
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.03 E-value=9.2e-09 Score=91.30 Aligned_cols=165 Identities=14% Similarity=0.115 Sum_probs=107.5
Q ss_pred cCCcceEEEEecCCCeEEEEeCC-CcEEEEeCCCCeEEEEeec-CC--CccccccceEEE---eCCCCEEEE-EeCCCcc
Q 018242 94 ICGRPLGLCFNKTNGDLYIADAY-FGLLKVGPEGGLATAVATQ-SE--GIPFRFCNSLDI---DQSTGIIYF-TDSSSQF 165 (359)
Q Consensus 94 ~~~~p~gi~~~~~~g~l~v~~~~-~~i~~~~~~~~~~~~~~~~-~~--~~~~~~~~~l~~---d~~g~~l~v-~d~~~~~ 165 (359)
..-.|-++.+++.++.+|+++.. ..|.+++++++.++.+... .. +.+...+.+|.+ |++|+ ||+ .+.+.+|
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~af 89 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAKSF 89 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETTTT
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCc-EEEEEcccccc
Confidence 33457789999889999999975 4699999987665444211 11 233346789999 79987 998 4533333
Q ss_pred ccccceeeeeecCCCceEEEEeCC---CCcEEEEeC--------------CCCCCceEEEccCCCEEEEEecCC-CEEEE
Q 018242 166 QRRNHISVILSGDKTGRLMKYDPA---TKQVTVLLG--------------NLSFPNGVALSEDGNYILLAETTS-CRILR 227 (359)
Q Consensus 166 ~~~~~~~~~~~~~~~g~v~~~d~~---~~~~~~~~~--------------~~~~p~gia~~~d~~~l~v~~~~~-~~i~~ 227 (359)
..... .......|+++|++ +++...... ....+++++++++|+ .||+++.. +.|++
T Consensus 90 ~~~g~-----~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~r 163 (334)
T 2p9w_A 90 NFADQ-----SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIAR 163 (334)
T ss_dssp CTTSC-----CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEE
T ss_pred ccccc-----ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEE
Confidence 21100 00123569999988 554433211 122488999999998 89999999 99999
Q ss_pred EEcCCCCCcceeEee-cC-----CCCCCceEECCCCCEEEEEecCCC
Q 018242 228 YWLKTSKAGTIEIVA-QL-----PGFPDNIKRSPRGGFWVGIHSRRK 268 (359)
Q Consensus 228 ~~~~~~~~~~~~~~~-~~-----~~~p~~i~~d~~G~lwv~~~~~~~ 268 (359)
++.++.. ...+. .. ...++||++.++|++.++....+.
T Consensus 164 V~pdG~~---~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~ 207 (334)
T 2p9w_A 164 VSADGKT---VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRA 207 (334)
T ss_dssp ECTTSCC---EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSS
T ss_pred EeCCCCE---EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCe
Confidence 9876542 22222 11 123779999999986665555544
No 161
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.03 E-value=1.9e-07 Score=86.38 Aligned_cols=183 Identities=10% Similarity=0.012 Sum_probs=114.3
Q ss_pred EEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCCCcE
Q 018242 40 AFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYFGL 119 (359)
Q Consensus 40 ~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~~~i 119 (359)
++.++|+++.++..++.|..||..+++... .+.........+++++++..|+.+...+.|
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--------------------~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i 163 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNFNLQRE--------------------IDQAHVSEITKLKFFPSGEALISSSQDMQL 163 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTSCEEEE--------------------ETTSSSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEecCCCEEEEEECCCCEEEEeCCCcceee--------------------ecccccCccEEEEECCCCCEEEEEeCCCeE
Confidence 567899988888899999999988764322 112233456789999944445555555568
Q ss_pred EEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCC
Q 018242 120 LKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGN 199 (359)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~ 199 (359)
..+|..+++....... ....+..++++|+|+.++.+ ...+.|..||..+++.......
T Consensus 164 ~iwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~------------------~~d~~v~iwd~~~~~~~~~~~~ 221 (420)
T 3vl1_A 164 KIWSVKDGSNPRTLIG----HRATVTDIAIIDRGRNVLSA------------------SLDGTIRLWECGTGTTIHTFNR 221 (420)
T ss_dssp EEEETTTCCCCEEEEC----CSSCEEEEEEETTTTEEEEE------------------ETTSCEEEEETTTTEEEEEECB
T ss_pred EEEeCCCCcCceEEcC----CCCcEEEEEEcCCCCEEEEE------------------cCCCcEEEeECCCCceeEEeec
Confidence 8999887653322211 12356789999999944433 2345788888877655433221
Q ss_pred -------------------------CCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-CCCCCCceEE
Q 018242 200 -------------------------LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKR 253 (359)
Q Consensus 200 -------------------------~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~ 253 (359)
......++++|+++. +++...++.|..|++.... ....+.. .......+++
T Consensus 222 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~ 298 (420)
T 3vl1_A 222 KENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKY-VIAGHVSGVITVHNVFSKE--QTIQLPSKFTCSCNSLTV 298 (420)
T ss_dssp TTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEE-EEEEETTSCEEEEETTTCC--EEEEECCTTSSCEEEEEE
T ss_pred CCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCE-EEEEcCCCeEEEEECCCCc--eeEEcccccCCCceeEEE
Confidence 122345667888875 4555677889999986432 1111211 2233456899
Q ss_pred CCCCC-EEEEEecCC
Q 018242 254 SPRGG-FWVGIHSRR 267 (359)
Q Consensus 254 d~~G~-lwv~~~~~~ 267 (359)
+++|. +.++....+
T Consensus 299 ~~~~~~~l~~g~~dg 313 (420)
T 3vl1_A 299 DGNNANYIYAGYENG 313 (420)
T ss_dssp CSSCTTEEEEEETTS
T ss_pred eCCCCCEEEEEeCCC
Confidence 99987 665554444
No 162
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=99.03 E-value=3e-08 Score=93.32 Aligned_cols=179 Identities=15% Similarity=0.123 Sum_probs=106.0
Q ss_pred EEEeeCCCCCCceEEEccCCC-eeEEecCCCEEEEEEcCCcce-EEEeecCCCCCCCCCCccccccccc-----ccCCcc
Q 018242 26 VQYQIEGAIGPESLAFDALGE-GPYTGVSDGRIIKWHQDQRRW-LHFARTSPNRDGCEGAYEYDHAAKE-----HICGRP 98 (359)
Q Consensus 26 ~~~~~~~~~~p~~i~~~~~G~-~l~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~p 98 (359)
.+++ .++..|++|++.|+|. ++|++...|+|+++++++... ..+...+. .+. .....+
T Consensus 7 ~~va-~gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~--------------~~~~g~~~~~e~Gl 71 (463)
T 2wg3_C 7 QEVV-SGLRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHK--------------LVQSGIKGGDERGL 71 (463)
T ss_dssp EEEE-EEESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTT--------------TBCCCCSSSCCCSE
T ss_pred EEec-cCCCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcc--------------eeccCccccCCCcc
Confidence 3444 4589999999999984 488888889999998754310 11111000 011 113457
Q ss_pred eEEEEecC---CCeEEEEeCC-------------CcEEEEeCCCC--------eEEEEeecCCCccccccceEEEeCCCC
Q 018242 99 LGLCFNKT---NGDLYIADAY-------------FGLLKVGPEGG--------LATAVATQSEGIPFRFCNSLDIDQSTG 154 (359)
Q Consensus 99 ~gi~~~~~---~g~l~v~~~~-------------~~i~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~d~~g~ 154 (359)
.||+++|+ ++.||++... ..|.|+....+ ..+.+..............|+++|||.
T Consensus 72 lgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~ 151 (463)
T 2wg3_C 72 LSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF 151 (463)
T ss_dssp EEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC
T ss_pred eeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc
Confidence 89999984 5899998431 25777765421 122333211112334567899999999
Q ss_pred EEEEEeCCCccccccceeeeeecCCCceEEEEeCCCC--------------------cEEEEeCCCCCCceEEEccC---
Q 018242 155 IIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATK--------------------QVTVLLGNLSFPNGVALSED--- 211 (359)
Q Consensus 155 ~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~--------------------~~~~~~~~~~~p~gia~~~d--- 211 (359)
|||+.-...................|+|+|+++++. ..+.+..+...|.+++|+++
T Consensus 152 -LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~ 230 (463)
T 2wg3_C 152 -LYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTD 230 (463)
T ss_dssp -EEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSS
T ss_pred -EEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCC
Confidence 999953321100000000001234689999999863 22455667788999999987
Q ss_pred --CC-EEEEEec
Q 018242 212 --GN-YILLAET 220 (359)
Q Consensus 212 --~~-~l~v~~~ 220 (359)
|+ ++|.++.
T Consensus 231 ~~G~l~~~~~D~ 242 (463)
T 2wg3_C 231 ININLTILCSDS 242 (463)
T ss_dssp TTCSEEEEEECC
T ss_pred cccceEEEeccc
Confidence 33 4666664
No 163
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.03 E-value=8.5e-07 Score=78.67 Aligned_cols=157 Identities=13% Similarity=0.113 Sum_probs=104.5
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
....+++++++|++++++..++.|..||..+++... .+.........+.+++++..++.+
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~--------------------~~~~~~~~v~~~~~~~~~~~l~s~ 125 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK--------------------TLKGHSNYVFCCNFNPQSNLIVSG 125 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE--------------------EEECCSSCEEEEEECSSSSEEEEE
T ss_pred CceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEE--------------------EEcCCCCCEEEEEEcCCCCEEEEE
Confidence 345689999999988888999999999998764322 122222345678899944445555
Q ss_pred eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcE
Q 018242 114 DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQV 193 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 193 (359)
...+.|..+|.++++....... ....+..+.++++|+ ++++- ...+.|..||..+++.
T Consensus 126 ~~d~~i~iwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~-~l~~~-----------------~~d~~i~~wd~~~~~~ 183 (312)
T 4ery_A 126 SFDESVRIWDVKTGKCLKTLPA----HSDPVSAVHFNRDGS-LIVSS-----------------SYDGLCRIWDTASGQC 183 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECC----CSSCEEEEEECTTSS-EEEEE-----------------ETTSCEEEEETTTCCE
T ss_pred eCCCcEEEEECCCCEEEEEecC----CCCcEEEEEEcCCCC-EEEEE-----------------eCCCcEEEEECCCCce
Confidence 5555688999987764332221 112467889999999 44441 2356788899877654
Q ss_pred EEEe-C-CCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC
Q 018242 194 TVLL-G-NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS 233 (359)
Q Consensus 194 ~~~~-~-~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~ 233 (359)
.... . .......++++|+++.++ +...++.|..|++...
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 184 LKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKG 224 (312)
T ss_dssp EEEECCSSCCCEEEEEECTTSSEEE-EEETTTEEEEEETTTT
T ss_pred eeEEeccCCCceEEEEECCCCCEEE-EEcCCCeEEEEECCCC
Confidence 4322 2 223346789999998654 4556789999998643
No 164
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.03 E-value=1.1e-06 Score=80.87 Aligned_cols=204 Identities=14% Similarity=0.011 Sum_probs=117.8
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEE-EeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLH-FARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
.-.+++++|+|+++.++. ++.+..|+..+++... +.... ....+|.................+++++++..|..+
T Consensus 66 ~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~ 141 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDS---AANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG 141 (393)
T ss_dssp CCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC--------------------CCCCBEEEEEECTTSSEEEEE
T ss_pred EEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCcc---ccccccccccccccCCCceeEEEEEECCCCCEEEEE
Confidence 446899999999665554 5789999987765332 21100 000000000000000011124678999944445555
Q ss_pred eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcE
Q 018242 114 DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQV 193 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 193 (359)
...+.|..+|.++++....... ....+..++++|+|++|+.+ +..+.|..||..+++.
T Consensus 142 ~~d~~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~p~~~~l~s~------------------s~d~~v~iwd~~~~~~ 199 (393)
T 1erj_A 142 AEDRLIRIWDIENRKIVMILQG----HEQDIYSLDYFPSGDKLVSG------------------SGDRTVRIWDLRTGQC 199 (393)
T ss_dssp ETTSCEEEEETTTTEEEEEECC----CSSCEEEEEECTTSSEEEEE------------------ETTSEEEEEETTTTEE
T ss_pred cCCCeEEEEECCCCcEEEEEcc----CCCCEEEEEEcCCCCEEEEe------------------cCCCcEEEEECCCCee
Confidence 5555688899988875433221 12356789999999944333 2356789999987766
Q ss_pred EEEeCCCCCCceEEEcc-CCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-------CCCCCCceEECCCCCEEEEEec
Q 018242 194 TVLLGNLSFPNGVALSE-DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-------LPGFPDNIKRSPRGGFWVGIHS 265 (359)
Q Consensus 194 ~~~~~~~~~p~gia~~~-d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-------~~~~p~~i~~d~~G~lwv~~~~ 265 (359)
............++++| +++ ++++...++.|..||+..... ...+.. .......++++++|++.++...
T Consensus 200 ~~~~~~~~~v~~~~~~~~~~~-~l~~~s~d~~v~iwd~~~~~~--~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~ 276 (393)
T 1erj_A 200 SLTLSIEDGVTTVAVSPGDGK-YIAAGSLDRAVRVWDSETGFL--VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL 276 (393)
T ss_dssp EEEEECSSCEEEEEECSTTCC-EEEEEETTSCEEEEETTTCCE--EEEEC------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEcCCCcEEEEEECCCCC-EEEEEcCCCcEEEEECCCCcE--EEeecccccCCCCCCCCEEEEEECCCCCEEEEEeC
Confidence 54433334567788998 676 566667788999999765421 111110 1122345889999987665554
Q ss_pred CC
Q 018242 266 RR 267 (359)
Q Consensus 266 ~~ 267 (359)
.+
T Consensus 277 d~ 278 (393)
T 1erj_A 277 DR 278 (393)
T ss_dssp TS
T ss_pred CC
Confidence 44
No 165
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.02 E-value=4e-08 Score=89.93 Aligned_cols=190 Identities=12% Similarity=0.016 Sum_probs=117.5
Q ss_pred ceEEEccCCCeeEEec--CCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEe
Q 018242 37 ESLAFDALGEGPYTGV--SDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIAD 114 (359)
Q Consensus 37 ~~i~~~~~G~~l~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~ 114 (359)
..++++|||+++.+++ .++.|..||..+.+... .+. .......++|+| +|+++++.
T Consensus 137 ~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~--------------------~~~-~~~~V~~v~fsp-dg~~l~s~ 194 (365)
T 4h5i_A 137 KLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF--------------------EIE-TRGEVKDLHFST-DGKVVAYI 194 (365)
T ss_dssp EEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE--------------------EEE-CSSCCCEEEECT-TSSEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE--------------------EeC-CCCceEEEEEcc-CCceEEec
Confidence 4799999999776554 56899999998864322 111 224467899999 77777665
Q ss_pred CCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEE
Q 018242 115 AYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVT 194 (359)
Q Consensus 115 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 194 (359)
..+++.+++..+++...... .......+..++++|+|+ ..++-+. .......+..++.......
T Consensus 195 s~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~v~fspdg~-~l~~~s~-------------d~~~~~~i~~~~~~~~~~~ 258 (365)
T 4h5i_A 195 TGSSLEVISTVTGSCIARKT--DFDKNWSLSKINFIADDT-VLIAASL-------------KKGKGIVLTKISIKSGNTS 258 (365)
T ss_dssp CSSCEEEEETTTCCEEEEEC--CCCTTEEEEEEEEEETTE-EEEEEEE-------------SSSCCEEEEEEEEETTEEE
T ss_pred cceeEEEEEeccCcceeeee--cCCCCCCEEEEEEcCCCC-EEEEEec-------------CCcceeEEeecccccceec
Confidence 56678888877765432211 111223567899999999 4444111 0111124556665443322
Q ss_pred -----EEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-CCCCCCceEECCCCCEEEEEecCC
Q 018242 195 -----VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 195 -----~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
.+.........++|+|||++ +++...++.|..||+...+ ....+.. -......++++|+|++.++....+
T Consensus 259 ~~~~~~~~~~~~~V~~~~~Spdg~~-lasgs~D~~V~iwd~~~~~--~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 259 VLRSKQVTNRFKGITSMDVDMKGEL-AVLASNDNSIALVKLKDLS--MSKIFKQAHSFAITEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp EEEEEEEESSCSCEEEEEECTTSCE-EEEEETTSCEEEEETTTTE--EEEEETTSSSSCEEEEEECTTSCEEEEEETTS
T ss_pred ceeeeeecCCCCCeEeEEECCCCCc-eEEEcCCCEEEEEECCCCc--EEEEecCcccCCEEEEEECCCCCEEEEEeCCC
Confidence 12233445678999999984 5556677899999975431 1122222 123346799999999887665544
No 166
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.02 E-value=1.7e-07 Score=86.36 Aligned_cols=273 Identities=9% Similarity=-0.007 Sum_probs=152.7
Q ss_pred CCCceEEEccCCC-eeEEe----------cCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEE
Q 018242 34 IGPESLAFDALGE-GPYTG----------VSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLC 102 (359)
Q Consensus 34 ~~p~~i~~~~~G~-~l~~~----------~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 102 (359)
....+++++|+|+ +++++ ..++.|..||..+++.... +...........++
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~------------------~~~~~~~~~v~~~~ 74 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKP------------------IASLQVDSKFNDLD 74 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSC------------------SCCCCCSSCEEEEE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcE------------------EEEEecCCceEEEE
Confidence 3567899999987 67777 6678899999887521100 01111223467899
Q ss_pred EecCCCeEEEEeCCCcEEEEeCCC----C-eEEEEeecCCCccccccceEEEeCC-CCEEEEEeCCCccccccceeeeee
Q 018242 103 FNKTNGDLYIADAYFGLLKVGPEG----G-LATAVATQSEGIPFRFCNSLDIDQS-TGIIYFTDSSSQFQRRNHISVILS 176 (359)
Q Consensus 103 ~~~~~g~l~v~~~~~~i~~~~~~~----~-~~~~~~~~~~~~~~~~~~~l~~d~~-g~~l~v~d~~~~~~~~~~~~~~~~ 176 (359)
+++++..|+.+...+.|..++..+ . ....+.. ....+..++++++ ++ ++++-
T Consensus 75 ~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~-~l~s~---------------- 132 (416)
T 2pm9_A 75 WSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSN-----HSSSVKTVKFNAKQDN-VLASG---------------- 132 (416)
T ss_dssp ECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCC-----SSSCCCEEEECSSSTT-BEEEE----------------
T ss_pred ECCCCCeEEEEccCCeEEEeecccccccccchhhccC-----CccceEEEEEcCCCCC-EEEEE----------------
Confidence 999555565555555688888876 2 2222211 1235778999998 77 55542
Q ss_pred cCCCceEEEEeCCCCc------EEEE----eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecC--
Q 018242 177 GDKTGRLMKYDPATKQ------VTVL----LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL-- 244 (359)
Q Consensus 177 ~~~~g~v~~~d~~~~~------~~~~----~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-- 244 (359)
...+.|..||..+++ .... .........+++++++..++++...++.|..|++...+. ...+...
T Consensus 133 -~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~--~~~~~~~~~ 209 (416)
T 2pm9_A 133 -GNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE--VIHLSYTSP 209 (416)
T ss_dssp -CSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE--EEEECCCCC
T ss_pred -cCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc--ceEEecccc
Confidence 335678888887654 1111 122344678999999544677777888999999865321 1112111
Q ss_pred ----CCCCCceEECCCC-CEEEEEecCC---CccccccccCCc-cc-eeeecCC-ccceeeeeecccc-cCc-------c
Q 018242 245 ----PGFPDNIKRSPRG-GFWVGIHSRR---KGISKLVLSFPW-IG-NVLIKLP-IDIVKIHSSLVKL-SGN-------G 305 (359)
Q Consensus 245 ----~~~p~~i~~d~~G-~lwv~~~~~~---~~~~~~~~~~~~-~g-~~~~~~~-~~~~~~~~~~~~~-~~~-------~ 305 (359)
......++++++| +++++....+ . +..++. .+ +....+. .....+..+.+.. ... .
T Consensus 210 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~-----i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d 284 (416)
T 2pm9_A 210 NSGIKQQLSVVEWHPKNSTRVATATGSDNDPS-----ILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD 284 (416)
T ss_dssp SSCCCCCEEEEEECSSCTTEEEEEECCSSSCC-----CCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS
T ss_pred ccccCCceEEEEECCCCCCEEEEEECCCCCce-----EEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCC
Confidence 2334568999987 5666554443 3 444443 22 3444443 3333344443332 111 0
Q ss_pred eEEEEECC-CCCEEEEEEccCCceeeceEEEEEe-CC-EEEEecCCCCeEEEEcCC
Q 018242 306 GMAMRISE-QGNVLEILEEIGRKMWRSISEVEEK-DG-NLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 306 ~~~~~~~~-~g~~~~~~~~~~g~~~~~~~~~~~~-~g-~l~ig~~~~~~l~~~~~~ 358 (359)
+.+..++. .++.+..+..+.+ .+..+... ++ ++++..-.+..|.++++.
T Consensus 285 g~v~~wd~~~~~~~~~~~~~~~----~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 285 NTVLLWNPESAEQLSQFPARGN----WCFKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp SEEEEECSSSCCEEEEEECSSS----CCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred CCEEEeeCCCCccceeecCCCC----ceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 23444442 3444444443222 22333333 34 566665567888888765
No 167
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.01 E-value=1.6e-07 Score=87.16 Aligned_cols=188 Identities=11% Similarity=0.086 Sum_probs=120.9
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEe
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIAD 114 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~ 114 (359)
.-.+++++++|+++.++..++.|..||..+.+... .+.........+++++++..++.+.
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~--------------------~~~~h~~~V~~v~~~p~~~~l~s~s 211 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIR--------------------TMHGHDHNVSSVSIMPNGDHIVSAS 211 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEE--------------------CCCCCSSCEEEEEECSSSSEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE--------------------EEcCCCCCEEEEEEeCCCCEEEEEe
Confidence 34588999999988899999999999998753221 2222334467899999444455555
Q ss_pred CCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEE
Q 018242 115 AYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVT 194 (359)
Q Consensus 115 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 194 (359)
..+.|..+|..++........ ....+..+.++++|+ ++++- +..+.|..||..+++..
T Consensus 212 ~D~~i~~wd~~~~~~~~~~~~----h~~~v~~~~~~~~g~-~l~s~-----------------s~D~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 212 RDKTIKMWEVQTGYCVKTFTG----HREWVRMVRPNQDGT-LIASC-----------------SNDQTVRVWVVATKECK 269 (410)
T ss_dssp TTSEEEEEETTTCCEEEEEEC----CSSCEEEEEECTTSS-EEEEE-----------------ETTSCEEEEETTTCCEE
T ss_pred CCCeEEEEECCCCcEEEEEeC----CCccEEEEEECCCCC-EEEEE-----------------cCCCeEEEEECCCCcee
Confidence 555688899988764322211 123567788999999 55551 23567888888776654
Q ss_pred EEe-CCCCCCceEEEccC--------------------CCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEE
Q 018242 195 VLL-GNLSFPNGVALSED--------------------GNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKR 253 (359)
Q Consensus 195 ~~~-~~~~~p~gia~~~d--------------------~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~ 253 (359)
... ........++++|+ +. ++++...++.|..||+.... ....+.........+++
T Consensus 270 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~iwd~~~~~--~~~~~~~h~~~v~~v~~ 346 (410)
T 1vyh_C 270 AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGP-FLLSGSRDKTIKMWDVSTGM--CLMTLVGHDNWVRGVLF 346 (410)
T ss_dssp EEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CC-EEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEE
T ss_pred eEecCCCceEEEEEEcCcccccchhhhccccccccCCCCC-EEEEEeCCCeEEEEECCCCc--eEEEEECCCCcEEEEEE
Confidence 432 33344567788775 44 56777788999999986432 12222222333467899
Q ss_pred CCCCCEEEEEecCC
Q 018242 254 SPRGGFWVGIHSRR 267 (359)
Q Consensus 254 d~~G~lwv~~~~~~ 267 (359)
+++|++.++....+
T Consensus 347 ~~~g~~l~s~s~D~ 360 (410)
T 1vyh_C 347 HSGGKFILSCADDK 360 (410)
T ss_dssp CSSSSCEEEEETTT
T ss_pred cCCCCEEEEEeCCC
Confidence 99997666554444
No 168
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.00 E-value=1.4e-07 Score=85.19 Aligned_cols=189 Identities=13% Similarity=0.011 Sum_probs=117.2
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
....+++++++|+.++++..++.|..||..+++.... +. ....+..+.+++++..++++
T Consensus 75 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~--------------------~~-~~~~v~~~~~~~~~~~l~~~ 133 (369)
T 3zwl_B 75 GTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVAT--------------------WK-SPVPVKRVEFSPCGNYFLAI 133 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEE--------------------EE-CSSCEEEEEECTTSSEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE--------------------ee-cCCCeEEEEEccCCCEEEEe
Confidence 3456899999999888888999999999987643321 11 22346789999955555555
Q ss_pred eCC-----CcEEEEeCCCCeE----EEEeec-----CCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCC
Q 018242 114 DAY-----FGLLKVGPEGGLA----TAVATQ-----SEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDK 179 (359)
Q Consensus 114 ~~~-----~~i~~~~~~~~~~----~~~~~~-----~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~ 179 (359)
... +.|..++...+.. ...... ........+..++++++|++++++ ..
T Consensus 134 ~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------~~ 195 (369)
T 3zwl_B 134 LDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAG------------------HK 195 (369)
T ss_dssp ECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEE------------------ET
T ss_pred cCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEE------------------cC
Confidence 544 4577777654321 100000 000111256788999999945444 23
Q ss_pred CceEEEEeCCC-CcEE-EEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCC
Q 018242 180 TGRLMKYDPAT-KQVT-VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRG 257 (359)
Q Consensus 180 ~g~v~~~d~~~-~~~~-~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G 257 (359)
.+.|..||..+ +... .+.........++++|+++.++ +...++.|..|++..... ...+. .......++++++|
T Consensus 196 dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~v~d~~~~~~--~~~~~-~~~~~~~~~~~~~~ 271 (369)
T 3zwl_B 196 DGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFI-TSSRDTNSFLVDVSTLQV--LKKYE-TDCPLNTAVITPLK 271 (369)
T ss_dssp TSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTCCE--EEEEE-CSSCEEEEEECSSS
T ss_pred CCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEE-EecCCceEEEEECCCCce--eeeec-CCCCceeEEecCCC
Confidence 46799999886 3333 2333445567899999998654 445678999999865321 12222 22334568889999
Q ss_pred CEEEEEec
Q 018242 258 GFWVGIHS 265 (359)
Q Consensus 258 ~lwv~~~~ 265 (359)
...++...
T Consensus 272 ~~l~~~~~ 279 (369)
T 3zwl_B 272 EFIILGGG 279 (369)
T ss_dssp SEEEEEEC
T ss_pred ceEEEeec
Confidence 75554443
No 169
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.00 E-value=1.5e-07 Score=82.09 Aligned_cols=190 Identities=11% Similarity=-0.014 Sum_probs=118.3
Q ss_pred CCCceEEEccCCCeeEEec----CCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCe
Q 018242 34 IGPESLAFDALGEGPYTGV----SDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGD 109 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~----~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~ 109 (359)
..+.+++++|+|+.+++.. ....|+.++..++....+ ... .....+++++++..
T Consensus 85 ~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~---------------------~~~-~~~~~~~~spdg~~ 142 (297)
T 2ojh_A 85 ICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLM---------------------TKN-LPSYWHGWSPDGKS 142 (297)
T ss_dssp CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEEC---------------------CSS-SSEEEEEECTTSSE
T ss_pred ccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEe---------------------ecC-CCccceEECCCCCE
Confidence 3456799999999776665 246889998876643322 111 12567789995555
Q ss_pred EEEEeC-CC--cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEE
Q 018242 110 LYIADA-YF--GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKY 186 (359)
Q Consensus 110 l~v~~~-~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 186 (359)
++++.. .+ .|+.++.++++...+.. ....+..+.++|+|++++++... .....|+.+
T Consensus 143 l~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~s~dg~~l~~~~~~---------------~~~~~i~~~ 202 (297)
T 2ojh_A 143 FTYCGIRDQVFDIYSMDIDSGVETRLTH-----GEGRNDGPDYSPDGRWIYFNSSR---------------TGQMQIWRV 202 (297)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEECCC-----SSSCEEEEEECTTSSEEEEEECT---------------TSSCEEEEE
T ss_pred EEEEECCCCceEEEEEECCCCcceEccc-----CCCccccceECCCCCEEEEEecC---------------CCCccEEEE
Confidence 664432 33 37777787776654322 12346789999999966666321 123468888
Q ss_pred eCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCC----------CEEEEEEcCCCCCcceeEeecCCCCCCceEECCC
Q 018242 187 DPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTS----------CRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPR 256 (359)
Q Consensus 187 d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~----------~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~ 256 (359)
+.+++....+.........++++||++.+++..... ..|+.|++.+.+......+.........++++++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 282 (297)
T 2ojh_A 203 RVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPD 282 (297)
T ss_dssp ETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTT
T ss_pred CCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCC
Confidence 877666665544333456789999999877766532 5699999865433222222222344667899999
Q ss_pred CC-EEEEEec
Q 018242 257 GG-FWVGIHS 265 (359)
Q Consensus 257 G~-lwv~~~~ 265 (359)
|+ |+++...
T Consensus 283 g~~l~~~~~~ 292 (297)
T 2ojh_A 283 GDEFAYVRYF 292 (297)
T ss_dssp SSEEEEEEEC
T ss_pred CCEEEEEEec
Confidence 97 4444443
No 170
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.00 E-value=9.3e-08 Score=85.74 Aligned_cols=188 Identities=10% Similarity=-0.044 Sum_probs=117.7
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcc----eEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCC-
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRR----WLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNG- 108 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g- 108 (359)
....+++++++|++++++..++.|..|+..+.+ ... ..........+++++++.
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~---------------------~~~~~~~v~~~~~~~~~~~ 70 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQ---------------------SLRYKHPLLCCNFIDNTDL 70 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEE---------------------EEECSSCEEEEEEEESSSE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcccccee---------------------eeecCCceEEEEECCCCCc
Confidence 355689999999988888999999999987654 221 112234467899999444
Q ss_pred eEEEEeCCCcEEEEeC-CCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEe
Q 018242 109 DLYIADAYFGLLKVGP-EGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYD 187 (359)
Q Consensus 109 ~l~v~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 187 (359)
.++++...+.|..++. ++++...+... .....+..+++++ ++.++.+ ...+.|..||
T Consensus 71 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~---~~~~~v~~l~~~~-~~~l~s~------------------~~d~~i~iwd 128 (342)
T 1yfq_A 71 QIYVGTVQGEILKVDLIGSPSFQALTNN---EANLGICRICKYG-DDKLIAA------------------SWDGLIEVID 128 (342)
T ss_dssp EEEEEETTSCEEEECSSSSSSEEECBSC---CCCSCEEEEEEET-TTEEEEE------------------ETTSEEEEEC
T ss_pred EEEEEcCCCeEEEEEeccCCceEecccc---CCCCceEEEEeCC-CCEEEEE------------------cCCCeEEEEc
Confidence 4666666666999999 88876443220 0123567899999 8734443 2345788888
Q ss_pred CCC---------CcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCC-CCCcceeEeecCCCCCCceEECC-C
Q 018242 188 PAT---------KQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKT-SKAGTIEIVAQLPGFPDNIKRSP-R 256 (359)
Q Consensus 188 ~~~---------~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~p~~i~~d~-~ 256 (359)
..+ ++..........+..+++++++ +++...++.|..|++.. ...............+..+++++ +
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 205 (342)
T 1yfq_A 129 PRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKE 205 (342)
T ss_dssp HHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGG
T ss_pred ccccccccccccCCeeeEEeeCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCC
Confidence 653 2211111222345688888775 44456678999999875 32211111112333456789999 8
Q ss_pred CCEEEEEecCC
Q 018242 257 GGFWVGIHSRR 267 (359)
Q Consensus 257 G~lwv~~~~~~ 267 (359)
|+++++....+
T Consensus 206 ~~~l~~~~~dg 216 (342)
T 1yfq_A 206 QEGYACSSIDG 216 (342)
T ss_dssp GCEEEEEETTS
T ss_pred CCEEEEEecCC
Confidence 88766555544
No 171
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.00 E-value=1.2e-07 Score=94.23 Aligned_cols=224 Identities=12% Similarity=0.066 Sum_probs=123.8
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
..+.+++++||+. +.++. ++.|+.||..+++...+. ........++++|++..|.++
T Consensus 82 ~~v~~~~~spd~~-~~~~~-~~~i~~~d~~~~~~~~l~---------------------~~~~~~~~~~~SpdG~~la~~ 138 (706)
T 2z3z_A 82 FPSFRTLDAGRGL-VVLFT-QGGLVGFDMLARKVTYLF---------------------DTNEETASLDFSPVGDRVAYV 138 (706)
T ss_dssp CCCEEEEETTTTE-EEEEE-TTEEEEEETTTTEEEEEE---------------------CCTTCCTTCEECTTSSEEEEE
T ss_pred cCceeEEECCCCe-EEEEE-CCEEEEEECCCCceEEcc---------------------CCcccccCCcCCCCCCEEEEE
Confidence 4578999999954 44443 489999999887544332 111234567889944445444
Q ss_pred eCCCcEEEEeCCC-----CeEEEEeecCCC----------ccccccceEEEeCCCCEEEEEeCCCcccccccee------
Q 018242 114 DAYFGLLKVGPEG-----GLATAVATQSEG----------IPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHIS------ 172 (359)
Q Consensus 114 ~~~~~i~~~~~~~-----~~~~~~~~~~~~----------~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~------ 172 (359)
..+.|+.++..+ ++...+...... .+...+..+.++|||++|+++....... ..+..
T Consensus 139 -~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~-~~~~~~~~~~~ 216 (706)
T 2z3z_A 139 -RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMV-KPTPIVDYHPL 216 (706)
T ss_dssp -ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTS-CCEEEEECCSS
T ss_pred -ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCC-ceEEeeccCCC
Confidence 345689999887 765443221110 0011257899999999777663100000 00000
Q ss_pred -----ee-----eecCCCceEEEEeCCCCcEEEEeCC---CCCCceEEEccCCCEEEEEecCC----CEEEEEEcCCCCC
Q 018242 173 -----VI-----LSGDKTGRLMKYDPATKQVTVLLGN---LSFPNGVALSEDGNYILLAETTS----CRILRYWLKTSKA 235 (359)
Q Consensus 173 -----~~-----~~~~~~g~v~~~d~~~~~~~~~~~~---~~~p~gia~~~d~~~l~v~~~~~----~~i~~~~~~~~~~ 235 (359)
.. ........|+.+|.++++...+... ...+..++++|||+.++++.... ..|+.|++....
T Consensus 217 ~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~- 295 (706)
T 2z3z_A 217 EAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR- 295 (706)
T ss_dssp SCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC-
T ss_pred CCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc-
Confidence 00 0011235699999988876654322 22356789999999888765443 388899876541
Q ss_pred cceeEee-c-CCC---CCCceEECC--CCCEEEEEecCCCccccccccCCccceeeecC
Q 018242 236 GTIEIVA-Q-LPG---FPDNIKRSP--RGGFWVGIHSRRKGISKLVLSFPWIGNVLIKL 287 (359)
Q Consensus 236 ~~~~~~~-~-~~~---~p~~i~~d~--~G~lwv~~~~~~~~~~~~~~~~~~~g~~~~~~ 287 (359)
....+. . ... ....+++++ +|++.++....+. ..++.++..++.+..+
T Consensus 296 -~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~---~~l~~~~~~~~~~~~l 350 (706)
T 2z3z_A 296 -FVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGW---NHLYLYDTTGRLIRQV 350 (706)
T ss_dssp -EEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSS---CEEEEEETTSCEEEEC
T ss_pred -eeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCc---cEEEEEECCCCEEEec
Confidence 112221 1 111 135689998 9975444433322 1133334445544444
No 172
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.00 E-value=5.8e-07 Score=81.19 Aligned_cols=189 Identities=11% Similarity=0.034 Sum_probs=117.6
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA 115 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~ 115 (359)
-.+++++++|.+++++..++.|..||..+++... .+.........+++++++..++.+..
T Consensus 79 V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~--------------------~~~~h~~~v~~v~~sp~~~~l~s~~~ 138 (343)
T 2xzm_R 79 VSDLALSQENCFAISSSWDKTLRLWDLRTGTTYK--------------------RFVGHQSEVYSVAFSPDNRQILSAGA 138 (343)
T ss_dssp EEEEEECSSTTEEEEEETTSEEEEEETTSSCEEE--------------------EEECCCSCEEEEEECSSTTEEEEEET
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEE--------------------EEcCCCCcEEEEEECCCCCEEEEEcC
Confidence 3578999999988889999999999998764221 12222344678999995555655665
Q ss_pred CCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCC----------CEEEEEeCCCccccccceeeeeecCCCceEEE
Q 018242 116 YFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQST----------GIIYFTDSSSQFQRRNHISVILSGDKTGRLMK 185 (359)
Q Consensus 116 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g----------~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 185 (359)
.+.|..+|..+........ .......+..+.++|++ . ++++ ....+.|..
T Consensus 139 d~~i~~wd~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~l~s-----------------~~~d~~i~i 198 (343)
T 2xzm_R 139 EREIKLWNILGECKFSSAE--KENHSDWVSCVRYSPIMKSANKVQPFAP-YFAS-----------------VGWDGRLKV 198 (343)
T ss_dssp TSCEEEEESSSCEEEECCT--TTSCSSCEEEEEECCCCCSCSCCCSSCC-EEEE-----------------EETTSEEEE
T ss_pred CCEEEEEeccCCceeeeec--ccCCCceeeeeeeccccccccccCCCCC-EEEE-----------------EcCCCEEEE
Confidence 5568888987544322211 11122345677888776 4 3333 234567888
Q ss_pred EeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEec
Q 018242 186 YDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHS 265 (359)
Q Consensus 186 ~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~ 265 (359)
||........+.........++++|++++ +++...++.|..||+...... ...+. .......+++++++.+.++..+
T Consensus 199 wd~~~~~~~~~~~h~~~v~~~~~s~~g~~-l~sgs~dg~v~iwd~~~~~~~-~~~~~-~~~~v~~v~~sp~~~~la~~~d 275 (343)
T 2xzm_R 199 WNTNFQIRYTFKAHESNVNHLSISPNGKY-IATGGKDKKLLIWDILNLTYP-QREFD-AGSTINQIAFNPKLQWVAVGTD 275 (343)
T ss_dssp EETTTEEEEEEECCSSCEEEEEECTTSSE-EEEEETTCEEEEEESSCCSSC-SEEEE-CSSCEEEEEECSSSCEEEEEES
T ss_pred EcCCCceeEEEcCccccceEEEECCCCCE-EEEEcCCCeEEEEECCCCccc-ceeec-CCCcEEEEEECCCCCEEEEECC
Confidence 98653333333344455688999999985 556667889999998432211 11121 1222467899999987665544
Q ss_pred CC
Q 018242 266 RR 267 (359)
Q Consensus 266 ~~ 267 (359)
..
T Consensus 276 ~~ 277 (343)
T 2xzm_R 276 QG 277 (343)
T ss_dssp SC
T ss_pred CC
Confidence 33
No 173
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.99 E-value=1e-07 Score=95.31 Aligned_cols=206 Identities=8% Similarity=0.012 Sum_probs=120.1
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCc---ceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQR---RWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI 112 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v 112 (359)
..+++++|||+.++++.. +.|+.||..++ +... +......+..++++|++..|.+
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~---------------------l~~~~~~~~~~~~SPDG~~la~ 168 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQ---------------------LTHGEGFATDAKLSPKGGFVSF 168 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCB---------------------CCCSSSCEEEEEECTTSSEEEE
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEE---------------------cccCCcccccccCCCCCCEEEE
Confidence 468999999996666655 89999998876 3221 1222234678899994444555
Q ss_pred EeCCCcEEEEeCCCCeEEEEeecCCCc------------cccccceEEEeCCCCEEEEEeCCCcccc-------------
Q 018242 113 ADAYFGLLKVGPEGGLATAVATQSEGI------------PFRFCNSLDIDQSTGIIYFTDSSSQFQR------------- 167 (359)
Q Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~d~~g~~l~v~d~~~~~~~------------- 167 (359)
+. .+.|+.++.++++...+....... ....+..+.++|||++|+++.....-..
T Consensus 169 ~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~ 247 (741)
T 2ecf_A 169 IR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTD 247 (741)
T ss_dssp EE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEE
T ss_pred Ee-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCccc
Confidence 44 457999999988765543211100 0112477999999997777632110000
Q ss_pred -ccceeee-eecCCCceEEEEeCCC-CcEEEEeC---CCCCCceEEEccCCCEEEEEec----CCCEEEEEEcCCCCCcc
Q 018242 168 -RNHISVI-LSGDKTGRLMKYDPAT-KQVTVLLG---NLSFPNGVALSEDGNYILLAET----TSCRILRYWLKTSKAGT 237 (359)
Q Consensus 168 -~~~~~~~-~~~~~~g~v~~~d~~~-~~~~~~~~---~~~~p~gia~~~d~~~l~v~~~----~~~~i~~~~~~~~~~~~ 237 (359)
....+.. ........|+.+|.++ ++...+.. .......+++ |||+.|+++.. ....|+.+|+.....
T Consensus 248 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~-- 324 (741)
T 2ecf_A 248 VIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ-- 324 (741)
T ss_dssp EEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE--
T ss_pred ceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce--
Confidence 0000000 0001122688899887 77655432 2233568899 99998887654 245788898765422
Q ss_pred eeEeec-CCC---CCCceEECCCCCEEEEEecCC
Q 018242 238 IEIVAQ-LPG---FPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 238 ~~~~~~-~~~---~p~~i~~d~~G~lwv~~~~~~ 267 (359)
...+.. ... ....++++++|+++++....+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g 358 (741)
T 2ecf_A 325 RVLAHETSPTWVPLHNSLRFLDDGSILWSSERTG 358 (741)
T ss_dssp EEEEEEECSSCCCCCSCCEECTTSCEEEEECTTS
T ss_pred EEEEEcCCCCcCCcCCceEECCCCeEEEEecCCC
Confidence 122222 111 235789999998665554433
No 174
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.99 E-value=9.5e-07 Score=80.87 Aligned_cols=204 Identities=11% Similarity=0.059 Sum_probs=120.4
Q ss_pred CCCceEEEcc-CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCe-EE
Q 018242 34 IGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGD-LY 111 (359)
Q Consensus 34 ~~p~~i~~~~-~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~-l~ 111 (359)
..-.+++++| +|++++++..++.|..||..+.+.......... .+. ..............+++.+++++ ++
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAV-----CSI--GRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEE-----EEE--CTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred CcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecccc-----ccc--cccccccCCCcEEEEEEccCCCcEEE
Confidence 4567999999 999888899999999999887532110000000 000 00000112334678899985554 54
Q ss_pred EEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeC---CCCEEEEEeCCCccccccceeeeeecCCCceEEEEeC
Q 018242 112 IADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQ---STGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDP 188 (359)
Q Consensus 112 v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~---~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 188 (359)
.+...+.|..++..+++....... ...+..+.+.+ ++..+.++ ...+.|..+|.
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~v~~~d~ 173 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADVFNF-----EETVYSHHMSPVSTKHCLVAVG------------------TRGPKVQLCDL 173 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEEEEC-----SSCEEEEEECSSCSSCCEEEEE------------------ESSSSEEEEES
T ss_pred EEeCCCeEEEeeCCCCccceeccC-----CCceeeeEeecCCCCCcEEEEE------------------cCCCeEEEEeC
Confidence 555455688999998875543331 12344566665 45534444 23467888988
Q ss_pred CCCcEEE-EeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEee---------------cCCCCCCceE
Q 018242 189 ATKQVTV-LLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA---------------QLPGFPDNIK 252 (359)
Q Consensus 189 ~~~~~~~-~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~---------------~~~~~p~~i~ 252 (359)
.+++... +.........++++|+++.++++...++.|..|++...... ...+. ........++
T Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 252 (408)
T 4a11_B 174 KSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGC-LITLDQHNGKKSQAVESANTAHNGKVNGLC 252 (408)
T ss_dssp SSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCC-SEECCTTTTCSCCCTTTSSCSCSSCEEEEE
T ss_pred CCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcc-cccccccccccceeeccccccccCceeEEE
Confidence 7665433 33334456789999999877777778899999998643211 11110 0112234588
Q ss_pred ECCCCCEEEEEecCCC
Q 018242 253 RSPRGGFWVGIHSRRK 268 (359)
Q Consensus 253 ~d~~G~lwv~~~~~~~ 268 (359)
++++|++.++....+.
T Consensus 253 ~~~~~~~l~~~~~dg~ 268 (408)
T 4a11_B 253 FTSDGLHLLTVGTDNR 268 (408)
T ss_dssp ECTTSSEEEEEETTSC
T ss_pred EcCCCCEEEEecCCCe
Confidence 9999986665554443
No 175
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.99 E-value=1.1e-06 Score=85.93 Aligned_cols=81 Identities=14% Similarity=0.040 Sum_probs=51.8
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE-E
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI-A 113 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v-~ 113 (359)
...+++++|+|+++.++..++.|..||..+++........ .+...........++++| +++.++ +
T Consensus 192 ~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~-------------~~~~~~h~~~V~~v~~sp-dg~~l~s~ 257 (611)
T 1nr0_A 192 FVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDD-------------SLKNVAHSGSVFGLTWSP-DGTKIASA 257 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCT-------------TSSSCSSSSCEEEEEECT-TSSEEEEE
T ss_pred ceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccc-------------cccccccCCCEEEEEECC-CCCEEEEE
Confidence 4568999999998888899999999998766432210000 000002234567899999 555444 4
Q ss_pred eCCCcEEEEeCCCCeE
Q 018242 114 DAYFGLLKVGPEGGLA 129 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~ 129 (359)
...+.|..+|..+++.
T Consensus 258 s~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 258 SADKTIKIWNVATLKV 273 (611)
T ss_dssp ETTSEEEEEETTTTEE
T ss_pred eCCCeEEEEeCCCCce
Confidence 5444577888887654
No 176
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.98 E-value=7.7e-07 Score=79.58 Aligned_cols=186 Identities=10% Similarity=0.062 Sum_probs=118.3
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEe
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIAD 114 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~ 114 (359)
.-.++++.++|+.++++..++.|..||..+++... .+.........+++++++..+..+.
T Consensus 67 ~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~--------------------~~~~h~~~v~~~~~~~~~~~l~s~s 126 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASWDKTLRLWDVATGETYQ--------------------RFVGHKSDVMSVDIDKKASMIISGS 126 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE--------------------EEECCSSCEEEEEECTTSCEEEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeE--------------------EEccCCCcEEEEEEcCCCCEEEEEe
Confidence 34578899999988889999999999998764321 1222234467889999444444455
Q ss_pred CCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCC------CCEEEEEeCCCccccccceeeeeecCCCceEEEEeC
Q 018242 115 AYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQS------TGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDP 188 (359)
Q Consensus 115 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~------g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 188 (359)
..+.|..++.++.....+... ...+..+.+.|. +. +.++ +...+.|..||.
T Consensus 127 ~D~~i~vwd~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~~~~~-~l~s-----------------~~~d~~i~~wd~ 183 (319)
T 3frx_A 127 RDKTIKVWTIKGQCLATLLGH-----NDWVSQVRVVPNEKADDDSV-TIIS-----------------AGNDKMVKAWNL 183 (319)
T ss_dssp TTSCEEEEETTSCEEEEECCC-----SSCEEEEEECCC------CC-EEEE-----------------EETTSCEEEEET
T ss_pred CCCeEEEEECCCCeEEEEecc-----CCcEEEEEEccCCCCCCCcc-EEEE-----------------EeCCCEEEEEEC
Confidence 455688899887655443221 123456666663 33 3333 133567888998
Q ss_pred CCCcEEEE-eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCC
Q 018242 189 ATKQVTVL-LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 189 ~~~~~~~~-~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
.+.+.... ..+......++++|+++ ++++...++.|..||+...+. ...+. .......++++++|.+.++....+
T Consensus 184 ~~~~~~~~~~~h~~~v~~~~~sp~g~-~l~s~~~dg~i~iwd~~~~~~--~~~~~-~~~~v~~~~~sp~~~~la~~~~~~ 259 (319)
T 3frx_A 184 NQFQIEADFIGHNSNINTLTASPDGT-LIASAGKDGEIMLWNLAAKKA--MYTLS-AQDEVFSLAFSPNRYWLAAATATG 259 (319)
T ss_dssp TTTEEEEEECCCCSCEEEEEECTTSS-EEEEEETTCEEEEEETTTTEE--EEEEE-CCSCEEEEEECSSSSEEEEEETTE
T ss_pred CcchhheeecCCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcE--EEEec-CCCcEEEEEEcCCCCEEEEEcCCC
Confidence 77655433 33445567899999998 456666778999999865321 11121 223345689999998777665433
No 177
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.97 E-value=6e-08 Score=88.43 Aligned_cols=207 Identities=11% Similarity=0.072 Sum_probs=120.2
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA 115 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~ 115 (359)
-.++++.|+++ ++++..++.|..||..+++..... .............+++++++..|..+..
T Consensus 97 V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~----------------~~~~~~h~~~V~~v~~spdg~~l~sgs~ 159 (357)
T 4g56_B 97 VTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVN----------------KFAKYEHDDIVKTLSVFSDGTQAVSGGK 159 (357)
T ss_dssp EEEEEEETTTE-EEEEETTSCEEEC--------CCC----------------CEEECCCSSCEEEEEECSSSSEEEEEET
T ss_pred EEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEE----------------eeccCCCCCCEEEEEECCCCCEEEEEeC
Confidence 35789999998 677778899999998765211100 0011112234678999994444555555
Q ss_pred CCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEE
Q 018242 116 YFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTV 195 (359)
Q Consensus 116 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 195 (359)
.+.|..+|..+++....... ....++.+++.+++..++++. ...+.|..||..+++...
T Consensus 160 dg~v~iwd~~~~~~~~~~~~----h~~~v~~v~~s~~~~~~~~s~-----------------~~dg~v~~wd~~~~~~~~ 218 (357)
T 4g56_B 160 DFSVKVWDLSQKAVLKSYNA----HSSEVNCVAACPGKDTIFLSC-----------------GEDGRILLWDTRKPKPAT 218 (357)
T ss_dssp TSCEEEEETTTTEEEEEECC----CSSCEEEEEECTTCSSCEEEE-----------------ETTSCEEECCTTSSSCBC
T ss_pred CCeEEEEECCCCcEEEEEcC----CCCCEEEEEEccCCCceeeee-----------------ccCCceEEEECCCCceee
Confidence 55688899998875433221 123567889998875355542 234678888887665432
Q ss_pred Ee---CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCC-EEEEEecCCCccc
Q 018242 196 LL---GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIHSRRKGIS 271 (359)
Q Consensus 196 ~~---~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~~~~~~~~ 271 (359)
.. .....+..++++|++..++++...++.|..|++...+. ...+.........+++.++|. +.++....+.
T Consensus 219 ~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~--~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~--- 293 (357)
T 4g56_B 219 RIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS--AQTSAVHSQNITGLAYSYHSSPFLASISEDCT--- 293 (357)
T ss_dssp BCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG--CEEECCCSSCEEEEEECSSSSCCEEEEETTSC---
T ss_pred eeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcE--eEEEeccceeEEEEEEcCCCCCEEEEEeCCCE---
Confidence 21 11233578899998766777777888999999865422 222222222245688988874 4444444343
Q ss_pred cccccCCc-cceeeecC
Q 018242 272 KLVLSFPW-IGNVLIKL 287 (359)
Q Consensus 272 ~~~~~~~~-~g~~~~~~ 287 (359)
+.+++. .++++..+
T Consensus 294 --i~iwd~~~~~~~~~~ 308 (357)
T 4g56_B 294 --VAVLDADFSEVFRDL 308 (357)
T ss_dssp --EEEECTTSCEEEEEC
T ss_pred --EEEEECCCCcEeEEC
Confidence 555553 45555443
No 178
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.97 E-value=9.1e-08 Score=83.41 Aligned_cols=187 Identities=12% Similarity=0.003 Sum_probs=114.3
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCC-cceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQ-RRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI 112 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v 112 (359)
....+++++|+|+.++++. ++.|+.||..+ ++...+. .......+..+++++++..+++
T Consensus 42 ~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~-------------------~~~~~~~~~~~~~spdg~~l~~ 101 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVD-------------------TGFATICNNDHGISPDGALYAI 101 (297)
T ss_dssp SCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECC-------------------CTTCCCBCSCCEECTTSSEEEE
T ss_pred cceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEec-------------------cccccccccceEECCCCCEEEE
Confidence 4677999999999665554 68999999988 6433221 0111133467889995555555
Q ss_pred EeC----CCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeC
Q 018242 113 ADA----YFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDP 188 (359)
Q Consensus 113 ~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 188 (359)
+.. ...|+.++.++++.+.+.. ...+..++++|+|++++++... ...-.|+.++.
T Consensus 102 ~~~~~~~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~spdg~~l~~~~~~---------------~~~~~l~~~~~ 160 (297)
T 2ojh_A 102 SDKVEFGKSAIYLLPSTGGTPRLMTK------NLPSYWHGWSPDGKSFTYCGIR---------------DQVFDIYSMDI 160 (297)
T ss_dssp EECTTTSSCEEEEEETTCCCCEECCS------SSSEEEEEECTTSSEEEEEEEE---------------TTEEEEEEEET
T ss_pred EEeCCCCcceEEEEECCCCceEEeec------CCCccceEECCCCCEEEEEECC---------------CCceEEEEEEC
Confidence 552 2358888888776544322 1135678999999966655211 11236888888
Q ss_pred CCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCC--EEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEE-EEEe
Q 018242 189 ATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSC--RILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFW-VGIH 264 (359)
Q Consensus 189 ~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lw-v~~~ 264 (359)
+++....+......+..++++|+++.++++...++ .|+.++.... ....+.........++++++|+.. ++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 236 (297)
T 2ojh_A 161 DSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS---SVERITDSAYGDWFPHPSPSGDKVVFVSY 236 (297)
T ss_dssp TTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS---CEEECCCCSEEEEEEEECTTSSEEEEEEE
T ss_pred CCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC---CcEEEecCCcccCCeEECCCCCEEEEEEc
Confidence 77776655544455678999999998887765444 4555543332 122222212223457889999744 4444
No 179
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.97 E-value=4.4e-07 Score=88.82 Aligned_cols=209 Identities=9% Similarity=0.002 Sum_probs=125.0
Q ss_pred CCCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE
Q 018242 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI 112 (359)
Q Consensus 33 ~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v 112 (359)
...|..++++|+|+.+..+. ++.+..||..+.+... .+.........++|+| +|++.+
T Consensus 18 ~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~--------------------~~~~h~~~v~~~~~sp-dg~~la 75 (611)
T 1nr0_A 18 RGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTE--------------------IYTEHSHQTTVAKTSP-SGYYCA 75 (611)
T ss_dssp TTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCE--------------------EECCCSSCEEEEEECT-TSSEEE
T ss_pred cCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCe--------------------EecCCCCceEEEEECC-CCcEEE
Confidence 45788999999999666655 4699999987542211 1222334467899999 666555
Q ss_pred -EeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCC
Q 018242 113 -ADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATK 191 (359)
Q Consensus 113 -~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 191 (359)
+...+.|..+|..+++...... ... ....+..++++|+|++|..+... ....+.|+.+|.. .
T Consensus 76 sg~~d~~v~lWd~~~~~~~~~~~-~~~-~~~~v~~v~fs~dg~~l~~~~~~--------------~~~~~~v~~wd~~-~ 138 (611)
T 1nr0_A 76 SGDVHGNVRIWDTTQTTHILKTT-IPV-FSGPVKDISWDSESKRIAAVGEG--------------RERFGHVFLFDTG-T 138 (611)
T ss_dssp EEETTSEEEEEESSSTTCCEEEE-EEC-SSSCEEEEEECTTSCEEEEEECC--------------SSCSEEEEETTTC-C
T ss_pred EEeCCCCEEEeECCCCcceeeEe-ecc-cCCceEEEEECCCCCEEEEEECC--------------CCceeEEEEeeCC-C
Confidence 4544458888876433211111 000 11357789999999944444211 0123568888743 2
Q ss_pred cEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCCCccc
Q 018242 192 QVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGIS 271 (359)
Q Consensus 192 ~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~~~~ 271 (359)
....+..+......++|+|++..++++...++.|..|+....+ ....+.........+++.++|++.++....+.
T Consensus 139 ~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~--~~~~l~~H~~~V~~v~fspdg~~las~s~D~~--- 213 (611)
T 1nr0_A 139 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK--FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGT--- 213 (611)
T ss_dssp BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSC---
T ss_pred CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe--EeeeeccccCceEEEEECCCCCEEEEEECCCc---
Confidence 2222333344567899999987667888888999999964321 11122222233466899999998776655554
Q ss_pred cccccCC-ccceeeecC
Q 018242 272 KLVLSFP-WIGNVLIKL 287 (359)
Q Consensus 272 ~~~~~~~-~~g~~~~~~ 287 (359)
+..++ ..++.+..+
T Consensus 214 --i~lwd~~~g~~~~~~ 228 (611)
T 1nr0_A 214 --IVLYNGVDGTKTGVF 228 (611)
T ss_dssp --EEEEETTTCCEEEEC
T ss_pred --EEEEECCCCcEeeee
Confidence 45554 345544433
No 180
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.96 E-value=6.4e-07 Score=82.76 Aligned_cols=154 Identities=11% Similarity=0.061 Sum_probs=101.6
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA 115 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~ 115 (359)
..+++++|+|+.++++..++.|+.||..+.+... .+. ........++++++..+.++..
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~--------------------~~~-~~~~~~~~~~~~~~~~l~~~~~ 117 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSK--------------------MLK-RADYTAVDTAKLQMRRFILGTT 117 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTT--------------------TSC-SCCEEEEEEECSSSCEEEEEET
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceee--------------------EEe-cCCceEEEEEecCCCEEEEEEC
Confidence 4589999999989999999999999987752100 111 1111223356673444555555
Q ss_pred CCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEE-
Q 018242 116 YFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVT- 194 (359)
Q Consensus 116 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~- 194 (359)
.+.|..++.++++....... ....+..++++|+|++|+.+ ...+.|..||..+++..
T Consensus 118 dg~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~------------------s~d~~i~iwd~~~~~~~~ 175 (420)
T 3vl1_A 118 EGDIKVLDSNFNLQREIDQA----HVSEITKLKFFPSGEALISS------------------SQDMQLKIWSVKDGSNPR 175 (420)
T ss_dssp TSCEEEECTTSCEEEEETTS----SSSCEEEEEECTTSSEEEEE------------------ETTSEEEEEETTTCCCCE
T ss_pred CCCEEEEeCCCcceeeeccc----ccCccEEEEECCCCCEEEEE------------------eCCCeEEEEeCCCCcCce
Confidence 55688999988775443211 22467889999999944443 23567999998765443
Q ss_pred EEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC
Q 018242 195 VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS 233 (359)
Q Consensus 195 ~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~ 233 (359)
.+.........++++|+++.++ +...++.|..|++...
T Consensus 176 ~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~v~iwd~~~~ 213 (420)
T 3vl1_A 176 TLIGHRATVTDIAIIDRGRNVL-SASLDGTIRLWECGTG 213 (420)
T ss_dssp EEECCSSCEEEEEEETTTTEEE-EEETTSCEEEEETTTT
T ss_pred EEcCCCCcEEEEEEcCCCCEEE-EEcCCCcEEEeECCCC
Confidence 3334445568899999998544 5567789999997643
No 181
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.96 E-value=7.7e-07 Score=81.51 Aligned_cols=212 Identities=12% Similarity=0.030 Sum_probs=119.7
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecC---CC---
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKT---NG--- 108 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~---~g--- 108 (359)
.-.++++++ ++++++..++.|..||..+.+... +. .....+.........++++++ ++
T Consensus 18 ~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~-------------~~-~~~~~~~~h~~~v~~~~~~~~~~~~g~~~ 81 (397)
T 1sq9_A 18 DIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNEN-------------PK-DKSYSHFVHKSGLHHVDVLQAIERDAFEL 81 (397)
T ss_dssp CEEEEEECS--SEEEEEETTSEEEEEESBCCTTCC-------------GG-GGEEEEECCTTCEEEEEEEEEEETTTEEE
T ss_pred CeEEEEecC--CeEEEEcCCCEEEEEECCCccccc-------------CC-CcceEEecCCCcEEEEEEecccccCCccc
Confidence 446888987 568888999999999998763000 00 000012222334578899983 15
Q ss_pred e-EEEEeCCCcEEEEeCCCCe------EEEEeecCCCccccccceEEEe----CCCCE-EEEEeCCCccccccceeeeee
Q 018242 109 D-LYIADAYFGLLKVGPEGGL------ATAVATQSEGIPFRFCNSLDID----QSTGI-IYFTDSSSQFQRRNHISVILS 176 (359)
Q Consensus 109 ~-l~v~~~~~~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~d----~~g~~-l~v~d~~~~~~~~~~~~~~~~ 176 (359)
+ |+.+...+.|..++.++++ ...+...........+..+.++ +++++ ++.+
T Consensus 82 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~----------------- 144 (397)
T 1sq9_A 82 CLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVAT----------------- 144 (397)
T ss_dssp EEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEE-----------------
T ss_pred cEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEE-----------------
Confidence 4 4445555568888877655 3332211000002467889999 99994 4443
Q ss_pred cCCCceEEEEeCCC------C-cEE-----EE-------eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcc
Q 018242 177 GDKTGRLMKYDPAT------K-QVT-----VL-------LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGT 237 (359)
Q Consensus 177 ~~~~g~v~~~d~~~------~-~~~-----~~-------~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~ 237 (359)
...+.|..||..+ + ... .+ .........++++|++ ++++...++.|..|++...+ .
T Consensus 145 -~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~--~ 219 (397)
T 1sq9_A 145 -DVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLR--P 219 (397)
T ss_dssp -ETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTE--E
T ss_pred -eCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCc--e
Confidence 2245677776654 2 221 22 1123456889999998 56666778899999986431 1
Q ss_pred eeEeec---C---CCCCCceEECCCCCEEEEEecC---CCccccccccCC-ccceeeecCCc
Q 018242 238 IEIVAQ---L---PGFPDNIKRSPRGGFWVGIHSR---RKGISKLVLSFP-WIGNVLIKLPI 289 (359)
Q Consensus 238 ~~~~~~---~---~~~p~~i~~d~~G~lwv~~~~~---~~~~~~~~~~~~-~~g~~~~~~~~ 289 (359)
...+.. . ......++++++|+++++.... +. +..++ ..++.+..+..
T Consensus 220 ~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~-----i~i~d~~~~~~~~~~~~ 276 (397)
T 1sq9_A 220 LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGC-----ITLYETEFGERIGSLSV 276 (397)
T ss_dssp EEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEE-----EEEEETTTCCEEEEECB
T ss_pred eEEEeccccccccCCccceEEECCCCCEEEEEecCCCCce-----EEEEECCCCcccceecc
Confidence 122222 1 3334668999999866655443 33 55554 35666555544
No 182
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.95 E-value=2.4e-06 Score=77.60 Aligned_cols=188 Identities=11% Similarity=0.095 Sum_probs=117.0
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
..-.++++.++|++++++..++.|..||..+.+.... +.........++++| ++..+++
T Consensus 65 ~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~--------------------~~~~~~~v~~~~~sp-~g~~las 123 (354)
T 2pbi_B 65 NKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHA--------------------VTMPCTWVMACAYAP-SGCAIAC 123 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE--------------------EECSSSCCCEEEECT-TSSEEEE
T ss_pred CeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceE--------------------EecCCCCEEEEEECC-CCCEEEE
Confidence 3456899999999889999999999999876543221 112223456889999 6665555
Q ss_pred eCC-CcEEEEeCCCCe-------EEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEE
Q 018242 114 DAY-FGLLKVGPEGGL-------ATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMK 185 (359)
Q Consensus 114 ~~~-~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 185 (359)
... +.+..++..... ...+.. ....+..+.+.++++.+..+ +..+.|..
T Consensus 124 g~~d~~i~v~~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~t~------------------s~D~~v~l 180 (354)
T 2pbi_B 124 GGLDNKCSVYPLTFDKNENMAAKKKSVAM-----HTNYLSACSFTNSDMQILTA------------------SGDGTCAL 180 (354)
T ss_dssp ESTTSEEEEEECCCCTTCCSGGGCEEEEE-----CSSCEEEEEECSSSSEEEEE------------------ETTSEEEE
T ss_pred eeCCCCEEEEEEeccccccccccceeeec-----cCCcEEEEEEeCCCCEEEEE------------------eCCCcEEE
Confidence 444 346666654321 111111 12346678999999834433 23567999
Q ss_pred EeCCCCcEEE-EeCCCCCCceEEEcc--CCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEE
Q 018242 186 YDPATKQVTV-LLGNLSFPNGVALSE--DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVG 262 (359)
Q Consensus 186 ~d~~~~~~~~-~~~~~~~p~gia~~~--d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~ 262 (359)
||.++++... +..+......+++.+ +++ ++++...++.|..||+...+ ....+.........+++.++|++.++
T Consensus 181 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~-~l~sgs~Dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~p~~~~l~s 257 (354)
T 2pbi_B 181 WDVESGQLLQSFHGHGADVLCLDLAPSETGN-TFVSGGCDKKAMVWDMRSGQ--CVQAFETHESDVNSVRYYPSGDAFAS 257 (354)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECCCSSCC-EEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EeCCCCeEEEEEcCCCCCeEEEEEEeCCCCC-EEEEEeCCCeEEEEECCCCc--EEEEecCCCCCeEEEEEeCCCCEEEE
Confidence 9988776543 333334456677776 455 56666778899999986542 12222222233456899999987776
Q ss_pred EecCCC
Q 018242 263 IHSRRK 268 (359)
Q Consensus 263 ~~~~~~ 268 (359)
....+.
T Consensus 258 ~s~D~~ 263 (354)
T 2pbi_B 258 GSDDAT 263 (354)
T ss_dssp EETTSC
T ss_pred EeCCCe
Confidence 555543
No 183
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.93 E-value=2.7e-06 Score=74.83 Aligned_cols=265 Identities=12% Similarity=0.059 Sum_probs=146.0
Q ss_pred CCCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE
Q 018242 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI 112 (359)
Q Consensus 33 ~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v 112 (359)
-..-.++++ +++++++++..++.|..||..+.+.... +.........+++++++..+++
T Consensus 18 ~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~--------------------~~~~~~~v~~~~~~~~~~~l~~ 76 (313)
T 3odt_A 18 DQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTV--------------------VYTGQGFLNSVCYDSEKELLLF 76 (313)
T ss_dssp SSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEE--------------------EEECSSCEEEEEEETTTTEEEE
T ss_pred CCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEE--------------------eecCCccEEEEEECCCCCEEEE
Confidence 345668888 8888788999999999999977643321 1222344678999995555656
Q ss_pred EeCCCcEEEEeCCCCeE-EEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCC
Q 018242 113 ADAYFGLLKVGPEGGLA-TAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATK 191 (359)
Q Consensus 113 ~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 191 (359)
+...+.+..++...... +.+.. ... ....+..+.+ +++.++.+ ...+.|..+|.. .
T Consensus 77 ~~~dg~i~~~~~~~~~~~~~~~~-~~~-~~~~i~~~~~--~~~~l~~~------------------~~d~~i~~~d~~-~ 133 (313)
T 3odt_A 77 GGKDTMINGVPLFATSGEDPLYT-LIG-HQGNVCSLSF--QDGVVISG------------------SWDKTAKVWKEG-S 133 (313)
T ss_dssp EETTSCEEEEETTCCTTSCC-CE-ECC-CSSCEEEEEE--ETTEEEEE------------------ETTSEEEEEETT-E
T ss_pred ecCCCeEEEEEeeecCCCCcccc-hhh-cccCEEEEEe--cCCEEEEE------------------eCCCCEEEEcCC-c
Confidence 66555577777654321 00101 011 1124456666 45534444 235678888832 2
Q ss_pred cEEEEeCCCCCCceEEEcc-CCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-CCCCCCceEECCCCCEEEEEecCCCc
Q 018242 192 QVTVLLGNLSFPNGVALSE-DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGGFWVGIHSRRKG 269 (359)
Q Consensus 192 ~~~~~~~~~~~p~gia~~~-d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwv~~~~~~~~ 269 (359)
....+.........+++.+ +++. +++...++.|..|+... ....+.. .......+++.++|.+.++...+.
T Consensus 134 ~~~~~~~~~~~v~~~~~~~~~~~~-l~~~~~d~~i~i~d~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~-- 206 (313)
T 3odt_A 134 LVYNLQAHNASVWDAKVVSFSENK-FLTASADKTIKLWQNDK----VIKTFSGIHNDVVRHLAVVDDGHFISCSNDGL-- 206 (313)
T ss_dssp EEEEEECCSSCEEEEEEEETTTTE-EEEEETTSCEEEEETTE----EEEEECSSCSSCEEEEEEEETTEEEEEETTSE--
T ss_pred EEEecccCCCceeEEEEccCCCCE-EEEEECCCCEEEEecCc----eEEEEeccCcccEEEEEEcCCCeEEEccCCCe--
Confidence 3333334444556778877 7774 55556778999998321 1222222 233345688888888555554432
Q ss_pred cccccccCC-ccceeeecCCccceeeeeeccccc-------CcceEEEEEC-CCCCEEEEEEccCCceeeceEEEEEe-C
Q 018242 270 ISKLVLSFP-WIGNVLIKLPIDIVKIHSSLVKLS-------GNGGMAMRIS-EQGNVLEILEEIGRKMWRSISEVEEK-D 339 (359)
Q Consensus 270 ~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~-~ 339 (359)
+..++ ..++.+..+......+..+.+... .+ +.+..++ .+++.+..+..+.+ .+..+... +
T Consensus 207 ----i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d-g~v~iwd~~~~~~~~~~~~~~~----~i~~~~~~~~ 277 (313)
T 3odt_A 207 ----IKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGED-RTVRIWSKENGSLKQVITLPAI----SIWSVDCMSN 277 (313)
T ss_dssp ----EEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETT-SEEEEECTTTCCEEEEEECSSS----CEEEEEECTT
T ss_pred ----EEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecC-CEEEEEECCCCceeEEEeccCc----eEEEEEEccC
Confidence 45554 345555554433333333333221 22 3444555 33455555543322 34444443 6
Q ss_pred CEEEEecCCCCeEEEEcCC
Q 018242 340 GNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 340 g~l~ig~~~~~~l~~~~~~ 358 (359)
+++..++. +..|.++++.
T Consensus 278 ~~~~~~~~-dg~i~iw~~~ 295 (313)
T 3odt_A 278 GDIIVGSS-DNLVRIFSQE 295 (313)
T ss_dssp SCEEEEET-TSCEEEEESC
T ss_pred CCEEEEeC-CCcEEEEeCC
Confidence 67666664 6678888765
No 184
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.93 E-value=1.7e-07 Score=93.15 Aligned_cols=190 Identities=12% Similarity=0.093 Sum_probs=116.2
Q ss_pred CceEEEccCCCeeEEec---------------------------------CCCEEEEEEcCCcceEEEeecCCCCCCCCC
Q 018242 36 PESLAFDALGEGPYTGV---------------------------------SDGRIIKWHQDQRRWLHFARTSPNRDGCEG 82 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~---------------------------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 82 (359)
+.++.++|||+.+++.. ....|+.||..+++...+.
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~----------- 251 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQ----------- 251 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECC-----------
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeec-----------
Confidence 58999999999766654 3357889998876433221
Q ss_pred CcccccccccccCCcceEEEEecCCCeEEEEeCCC-----cEEEEeCCCC-eEEEEeecCCCccccccceEEEeC--CCC
Q 018242 83 AYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYF-----GLLKVGPEGG-LATAVATQSEGIPFRFCNSLDIDQ--STG 154 (359)
Q Consensus 83 ~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~~-----~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~d~--~g~ 154 (359)
........+..+++++++..|+++.... .|+.+|..++ ..+.+..............++++| +|+
T Consensus 252 -------~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~ 324 (706)
T 2z3z_A 252 -------TGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ 324 (706)
T ss_dssp -------CCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE
T ss_pred -------cCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCE
Confidence 0001123356789999445577654332 5889999988 555443211111111246789999 999
Q ss_pred EEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCCCCCCce-EEEccCCCEEEEEecCCC----EEEEEE
Q 018242 155 IIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPNG-VALSEDGNYILLAETTSC----RILRYW 229 (359)
Q Consensus 155 ~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~g-ia~~~d~~~l~v~~~~~~----~i~~~~ 229 (359)
++|+++. .....|+.++.+++..+.+..+...... ++++||++.+|++...++ .|++++
T Consensus 325 ~l~~~~~----------------~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 325 FIWQSRR----------------DGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp EEEEECT----------------TSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred EEEEEcc----------------CCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEE
Confidence 5555522 1234789998766555554333222334 789999999988887765 888888
Q ss_pred cCCCCCcceeEeecCCCCCCceEECCCCCEEEEE
Q 018242 230 LKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGI 263 (359)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~ 263 (359)
+++.. .+.+.. ......++++++|+.++..
T Consensus 389 ~~~~~---~~~l~~-~~~~~~~~~spdg~~l~~~ 418 (706)
T 2z3z_A 389 IKGGK---TKDLTP-ESGMHRTQLSPDGSAIIDI 418 (706)
T ss_dssp TTCCC---CEESCC-SSSEEEEEECTTSSEEEEE
T ss_pred cCCCC---ceeccC-CCceEEEEECCCCCEEEEE
Confidence 76532 222221 1224568889999865544
No 185
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.93 E-value=2.2e-07 Score=84.21 Aligned_cols=192 Identities=9% Similarity=-0.032 Sum_probs=118.5
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
....+++++++|+.++++..++.|..||..+++..... ...........+++++++..++++
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~------------------~~~~~~~~v~~~~~~~~~~~l~~~ 114 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTL------------------VILRINRAARCVRWAPNEKKFAVG 114 (372)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEE------------------ECCCCSSCEEEEEECTTSSEEEEE
T ss_pred CcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeE------------------EeecCCCceeEEEECCCCCEEEEE
Confidence 35568999999998888888999999998776433221 112223446789999955556666
Q ss_pred eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCC----
Q 018242 114 DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPA---- 189 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~---- 189 (359)
...+.|..++.+++................+..+++++++++++.+ ...+.|..||..
T Consensus 115 ~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~------------------~~dg~i~~~d~~~~~~ 176 (372)
T 1k8k_C 115 SGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG------------------SCDFKCRIFSAYIKEV 176 (372)
T ss_dssp ETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE------------------ETTSCEEEEECCCTTT
T ss_pred eCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE------------------cCCCCEEEEEcccccc
Confidence 6555677777765541111111111112357789999999944443 224567778742
Q ss_pred --------------CCcEEE-EeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEEC
Q 018242 190 --------------TKQVTV-LLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRS 254 (359)
Q Consensus 190 --------------~~~~~~-~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d 254 (359)
.++... +.........++++|+++.++ +...++.|..|++...+ ....+.........++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~ 253 (372)
T 1k8k_C 177 EERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVA-WVSHDSTVCLADADKKM--AVATLASETLPLLAVTFI 253 (372)
T ss_dssp SCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEE-EEETTTEEEEEEGGGTT--EEEEEECSSCCEEEEEEE
T ss_pred cccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEE-EEeCCCEEEEEECCCCc--eeEEEccCCCCeEEEEEe
Confidence 333332 223334567899999998554 45577899999986442 122232222234668888
Q ss_pred CCCCEEEEEe
Q 018242 255 PRGGFWVGIH 264 (359)
Q Consensus 255 ~~G~lwv~~~ 264 (359)
++|.+.++..
T Consensus 254 ~~~~~l~~~~ 263 (372)
T 1k8k_C 254 TESSLVAAGH 263 (372)
T ss_dssp ETTEEEEEET
T ss_pred cCCCEEEEEe
Confidence 9998776663
No 186
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.93 E-value=6.8e-07 Score=82.50 Aligned_cols=193 Identities=10% Similarity=-0.042 Sum_probs=123.7
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEe
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIAD 114 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~ 114 (359)
...++.+ +++.++++..++.|..||......... .+........++.+++++..++++.
T Consensus 178 ~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~-------------------~~~~~~~~v~~~~~~~~~~~l~s~~ 236 (401)
T 4aez_A 178 RVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIG-------------------TLQGHSSEVCGLAWRSDGLQLASGG 236 (401)
T ss_dssp CEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEE-------------------EEECCSSCEEEEEECTTSSEEEEEE
T ss_pred ceEEEEE--CCCEEEEEcCCCCEEEEecccCcceee-------------------EEcCCCCCeeEEEEcCCCCEEEEEe
Confidence 4446666 456688899999999999874321111 1222334567899999444455556
Q ss_pred CCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEE
Q 018242 115 AYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVT 194 (359)
Q Consensus 115 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 194 (359)
..+.|..+|..+++....... ....+..++++|++..++++..+ ...+.|..||..+++..
T Consensus 237 ~d~~v~iwd~~~~~~~~~~~~----~~~~v~~~~~~p~~~~ll~~~~g---------------s~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 237 NDNVVQIWDARSSIPKFTKTN----HNAAVKAVAWCPWQSNLLATGGG---------------TMDKQIHFWNAATGARV 297 (401)
T ss_dssp TTSCEEEEETTCSSEEEEECC----CSSCCCEEEECTTSTTEEEEECC---------------TTTCEEEEEETTTCCEE
T ss_pred CCCeEEEccCCCCCccEEecC----CcceEEEEEECCCCCCEEEEecC---------------CCCCEEEEEECCCCCEE
Confidence 555688999987764332211 12356789999987646666321 23568999998877665
Q ss_pred EEeCCCCCCceEEEccCCCEEEEE-ecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCC
Q 018242 195 VLLGNLSFPNGVALSEDGNYILLA-ETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 195 ~~~~~~~~p~gia~~~d~~~l~v~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
...........++++++++.++.+ +..++.|..|++..........+....+....++++++|.+.++....+
T Consensus 298 ~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg 371 (401)
T 4aez_A 298 NTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDE 371 (401)
T ss_dssp EEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTS
T ss_pred EEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 444444557899999999976665 4467899999986542221111222234456789999998766555444
No 187
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.90 E-value=1.2e-06 Score=77.58 Aligned_cols=203 Identities=10% Similarity=-0.026 Sum_probs=122.4
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA 115 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~ 115 (359)
-.++.+.++|+.++++..++.|..||..+++... .+.........+++++++..++.+..
T Consensus 58 v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~--------------------~~~~h~~~v~~~~~~~~~~~l~sgs~ 117 (304)
T 2ynn_A 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV--------------------DFEAHPDYIRSIAVHPTKPYVLSGSD 117 (304)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE--------------------EEECCSSCEEEEEECSSSSEEEEEET
T ss_pred EEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEE--------------------EEeCCCCcEEEEEEcCCCCEEEEECC
Confidence 3578899999988899999999999998764321 22223344678999994444555555
Q ss_pred CCcEEEEeCCCCe-EEEEeecCCCccccccceEEEeC-CCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcE
Q 018242 116 YFGLLKVGPEGGL-ATAVATQSEGIPFRFCNSLDIDQ-STGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQV 193 (359)
Q Consensus 116 ~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~d~-~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 193 (359)
.+.|..+|.+++. ...... + ....+..++++| +++ ++++- ...+.|..||..++..
T Consensus 118 D~~v~lWd~~~~~~~~~~~~---~-h~~~v~~v~~~p~~~~-~l~sg-----------------s~D~~v~iwd~~~~~~ 175 (304)
T 2ynn_A 118 DLTVKLWNWENNWALEQTFE---G-HEHFVMCVAFNPKDPS-TFASG-----------------CLDRTVKVWSLGQSTP 175 (304)
T ss_dssp TSCEEEEEGGGTTEEEEEEC---C-CCSCEEEEEECTTCTT-EEEEE-----------------ETTSEEEEEETTCSSC
T ss_pred CCeEEEEECCCCcchhhhhc---c-cCCcEEEEEECCCCCC-EEEEE-----------------eCCCeEEEEECCCCCc
Confidence 5568888987663 222211 1 123567899998 566 55541 3356788888765432
Q ss_pred E-EEe-CCCCCCceEEEcc--CCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCCCc
Q 018242 194 T-VLL-GNLSFPNGVALSE--DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKG 269 (359)
Q Consensus 194 ~-~~~-~~~~~p~gia~~~--d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~~ 269 (359)
. .+. ........+++.+ +++ ++++...++.|..||+.... ....+.........+++.+++.+.++....+.
T Consensus 176 ~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~D~~i~iWd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~- 251 (304)
T 2ynn_A 176 NFTLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDGT- 251 (304)
T ss_dssp SEEEECCCTTCEEEEEECCSTTCC-EEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSEEEEEETTSC-
T ss_pred cceeccCCcCcEEEEEEEEcCCCC-EEEEEcCCCeEEEEeCCCCc--cceeeCCCCCCEEEEEECCCCCEEEEEcCCCe-
Confidence 2 222 2223345566765 555 56667788999999986431 11222222222345788999987776655553
Q ss_pred cccccccCCc-cceeeecCC
Q 018242 270 ISKLVLSFPW-IGNVLIKLP 288 (359)
Q Consensus 270 ~~~~~~~~~~-~g~~~~~~~ 288 (359)
+..++. +++.+..+.
T Consensus 252 ----i~iWd~~~~~~~~~~~ 267 (304)
T 2ynn_A 252 ----LKIWNSSTYKVEKTLN 267 (304)
T ss_dssp ----EEEEETTTCCEEEEEC
T ss_pred ----EEEEECCCCceeeecc
Confidence 455443 455554443
No 188
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.90 E-value=1.3e-06 Score=78.44 Aligned_cols=195 Identities=13% Similarity=-0.029 Sum_probs=112.2
Q ss_pred EEeeCCCCCCceEEEccCCCeeE-EecC---CCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEE
Q 018242 27 QYQIEGAIGPESLAFDALGEGPY-TGVS---DGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLC 102 (359)
Q Consensus 27 ~~~~~~~~~p~~i~~~~~G~~l~-~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 102 (359)
.+..+--....++++.|+|..+. ++.. ++.|..||..+++..... .. ........++
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~------------------~~-~~~~~v~~~~ 72 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLR------------------EI-EKAKPIKCGT 72 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEE------------------EE-EESSCEEEEE
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCccccee------------------ee-cccCcEEEEE
Confidence 44344345677999999996454 4443 789999999887544321 11 1223457888
Q ss_pred EecCC---CeEEEEeCCCcEEEEeCCCCe--EEEEeecCCCccccccceE------EEeCCCCEEEEEeCCCccccccce
Q 018242 103 FNKTN---GDLYIADAYFGLLKVGPEGGL--ATAVATQSEGIPFRFCNSL------DIDQSTGIIYFTDSSSQFQRRNHI 171 (359)
Q Consensus 103 ~~~~~---g~l~v~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~l------~~d~~g~~l~v~d~~~~~~~~~~~ 171 (359)
++++. ..++.+...+.|..++..+++ ...+.. ....+..+ +++++++.++.+
T Consensus 73 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~s~~~~~l~~~------------ 135 (357)
T 3i2n_A 73 FGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKG-----HKEIINAIDGIGGLGIGEGAPEIVTG------------ 135 (357)
T ss_dssp CTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECC-----CSSCEEEEEEESGGGCC-CCCEEEEE------------
T ss_pred EcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEe-----cccceEEEeeccccccCCCccEEEEE------------
Confidence 88852 556666655568899988765 222211 11234445 456888844433
Q ss_pred eeeeecCCCceEEEEeCCCCc--EEEEeCCC----CCCceEE----EccCCCEEEEEecCCCEEEEEEcCCCCCcceeEe
Q 018242 172 SVILSGDKTGRLMKYDPATKQ--VTVLLGNL----SFPNGVA----LSEDGNYILLAETTSCRILRYWLKTSKAGTIEIV 241 (359)
Q Consensus 172 ~~~~~~~~~g~v~~~d~~~~~--~~~~~~~~----~~p~gia----~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~ 241 (359)
...+.|..||..++. ...+.... .....++ ++++++. +++...++.|..|++..... ...
T Consensus 136 ------~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~---~~~ 205 (357)
T 3i2n_A 136 ------SRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERV-VCAGYDNGDIKLFDLRNMAL---RWE 205 (357)
T ss_dssp ------ETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCE-EEEEETTSEEEEEETTTTEE---EEE
T ss_pred ------eCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCE-EEEEccCCeEEEEECccCce---eee
Confidence 234678889887654 23332111 1234455 6788885 45555678999999865422 112
Q ss_pred ecCCCCCCceEECC---CCCEEEEEecCC
Q 018242 242 AQLPGFPDNIKRSP---RGGFWVGIHSRR 267 (359)
Q Consensus 242 ~~~~~~p~~i~~d~---~G~lwv~~~~~~ 267 (359)
.........+++++ +|++.++....+
T Consensus 206 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 234 (357)
T 3i2n_A 206 TNIKNGVCSLEFDRKDISMNKLVATSLEG 234 (357)
T ss_dssp EECSSCEEEEEESCSSSSCCEEEEEESTT
T ss_pred cCCCCceEEEEcCCCCCCCCEEEEECCCC
Confidence 22334456788888 787666554444
No 189
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.89 E-value=1.2e-06 Score=79.23 Aligned_cols=159 Identities=9% Similarity=0.029 Sum_probs=100.4
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEe
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIAD 114 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~ 114 (359)
.-.+++++|+|+++.++..++.+..|+..+....... .+.........+++++++..|..+.
T Consensus 63 ~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~------------------~~~~h~~~v~~v~~sp~~~~l~s~s 124 (345)
T 3fm0_A 63 TVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVT------------------TLEGHENEVKSVAWAPSGNLLATCS 124 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEE------------------EECCCSSCEEEEEECTTSSEEEEEE
T ss_pred cEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEE------------------EccCCCCCceEEEEeCCCCEEEEEE
Confidence 3458999999998888999999999998776433221 2223334567899999444444455
Q ss_pred CCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEE
Q 018242 115 AYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVT 194 (359)
Q Consensus 115 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 194 (359)
..+.|..++..++........... ....+..++++|+++ +.++- ...+.|..|+..++...
T Consensus 125 ~D~~v~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~-~l~s~-----------------s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 125 RDKSVWVWEVDEEDEYECVSVLNS-HTQDVKHVVWHPSQE-LLASA-----------------SYDDTVKLYREEEDDWV 185 (345)
T ss_dssp TTSCEEEEEECTTSCEEEEEEECC-CCSCEEEEEECSSSS-CEEEE-----------------ETTSCEEEEEEETTEEE
T ss_pred CCCeEEEEECCCCCCeEEEEEecC-cCCCeEEEEECCCCC-EEEEE-----------------eCCCcEEEEEecCCCEE
Confidence 555688888765432111111111 123567899999999 44441 22456777776555432
Q ss_pred ---EEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcC
Q 018242 195 ---VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLK 231 (359)
Q Consensus 195 ---~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~ 231 (359)
.+.........++|+|+++. +++...++.|..|+..
T Consensus 186 ~~~~~~~h~~~v~~l~~sp~g~~-l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 186 CCATLEGHESTVWSLAFDPSGQR-LASCSDDRTVRIWRQY 224 (345)
T ss_dssp EEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEEEE
T ss_pred EEEEecCCCCceEEEEECCCCCE-EEEEeCCCeEEEeccc
Confidence 23334455678999999985 5566677899999863
No 190
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.89 E-value=2.3e-06 Score=78.20 Aligned_cols=157 Identities=10% Similarity=0.008 Sum_probs=105.8
Q ss_pred CCceEEEcc-CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 35 GPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 35 ~p~~i~~~~-~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
...++++.+ +++.++++..++.|..||..+.....+.. ..........+++++++..++.+
T Consensus 120 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~------------------~~~~~~~v~~~~~~~~~~~l~~~ 181 (383)
T 3ei3_B 120 AITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAK------------------TDSWDYWYCCVDVSVSRQMLATG 181 (383)
T ss_dssp BEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEEC------------------CCCSSCCEEEEEEETTTTEEEEE
T ss_pred ceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEec------------------cCCCCCCeEEEEECCCCCEEEEE
Confidence 445889999 67878888899999999998764444421 11112346789999955555556
Q ss_pred eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCC-EEEEEeCCCccccccceeeeeecCCCceEEEEeCCC--
Q 018242 114 DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTG-IIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPAT-- 190 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~-~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~-- 190 (359)
...+.|..+|..+.....+.. ....+..++++++++ .++.+ ...+.|..||..+
T Consensus 182 ~~d~~i~i~d~~~~~~~~~~~-----h~~~v~~~~~~~~~~~~l~s~------------------~~d~~i~iwd~~~~~ 238 (383)
T 3ei3_B 182 DSTGRLLLLGLDGHEIFKEKL-----HKAKVTHAEFNPRCDWLMATS------------------SVDATVKLWDLRNIK 238 (383)
T ss_dssp ETTSEEEEEETTSCEEEEEEC-----SSSCEEEEEECSSCTTEEEEE------------------ETTSEEEEEEGGGCC
T ss_pred CCCCCEEEEECCCCEEEEecc-----CCCcEEEEEECCCCCCEEEEE------------------eCCCEEEEEeCCCCC
Confidence 655568889987655444322 123577899999998 34444 2346788888765
Q ss_pred --CcEEEEeCCCCCCceEEEcc-CCCEEEEEecCCCEEEEEEcCCC
Q 018242 191 --KQVTVLLGNLSFPNGVALSE-DGNYILLAETTSCRILRYWLKTS 233 (359)
Q Consensus 191 --~~~~~~~~~~~~p~gia~~~-d~~~l~v~~~~~~~i~~~~~~~~ 233 (359)
+..............++++| +++.++ +...++.|..|++...
T Consensus 239 ~~~~~~~~~~~~~~v~~~~~s~~~~~~l~-~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 239 DKNSYIAEMPHEKPVNAAYFNPTDSTKLL-TTDQRNEIRVYSSYDW 283 (383)
T ss_dssp STTCEEEEEECSSCEEEEEECTTTSCEEE-EEESSSEEEEEETTBT
T ss_pred cccceEEEecCCCceEEEEEcCCCCCEEE-EEcCCCcEEEEECCCC
Confidence 44443334445568899999 988554 5556789999998654
No 191
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.89 E-value=5.1e-06 Score=74.89 Aligned_cols=194 Identities=10% Similarity=-0.015 Sum_probs=113.7
Q ss_pred CceEEE-----cc-CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCe
Q 018242 36 PESLAF-----DA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGD 109 (359)
Q Consensus 36 p~~i~~-----~~-~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~ 109 (359)
-.++++ .+ +|++++++..++.|..||..+.+.... .+.....+.........+++++ ++.
T Consensus 24 V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~-------------~~~~~~~l~~h~~~V~~~~~~~-~~~ 89 (343)
T 2xzm_R 24 VTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGY-------------FGIPHKALTGHNHFVSDLALSQ-ENC 89 (343)
T ss_dssp EEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSB-------------SEEEEEEECCCSSCEEEEEECS-STT
T ss_pred hhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccc-------------cccccchhccCCCceEEEEECC-CCC
Confidence 357777 55 888888999999999999865310000 0000001222233467889999 555
Q ss_pred EEE-EeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeC
Q 018242 110 LYI-ADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDP 188 (359)
Q Consensus 110 l~v-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 188 (359)
+.+ +...+.|..+|..+++....... ....+..++++|+|++|..+ +..+.|..||.
T Consensus 90 ~l~s~s~D~~v~lwd~~~~~~~~~~~~----h~~~v~~v~~sp~~~~l~s~------------------~~d~~i~~wd~ 147 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRTGTTYKRFVG----HQSEVYSVAFSPDNRQILSA------------------GAEREIKLWNI 147 (343)
T ss_dssp EEEEEETTSEEEEEETTSSCEEEEEEC----CCSCEEEEEECSSTTEEEEE------------------ETTSCEEEEES
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEcC----CCCcEEEEEECCCCCEEEEE------------------cCCCEEEEEec
Confidence 444 45445588889987764322211 12356789999999944333 23467888887
Q ss_pred CCCcEEEEe---CCCCCCceEEEccCCC---------EEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCC
Q 018242 189 ATKQVTVLL---GNLSFPNGVALSEDGN---------YILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPR 256 (359)
Q Consensus 189 ~~~~~~~~~---~~~~~p~gia~~~d~~---------~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~ 256 (359)
.+....... ........++++|++. .++++...++.|..|+... .....+.........++++++
T Consensus 148 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~~~~h~~~v~~~~~s~~ 224 (343)
T 2xzm_R 148 LGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF---QIRYTFKAHESNVNHLSISPN 224 (343)
T ss_dssp SSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT---EEEEEEECCSSCEEEEEECTT
T ss_pred cCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC---ceeEEEcCccccceEEEECCC
Confidence 643322222 1222345778888762 2566777889999999422 111222222333466899999
Q ss_pred CCEEEEEecCCC
Q 018242 257 GGFWVGIHSRRK 268 (359)
Q Consensus 257 G~lwv~~~~~~~ 268 (359)
|++.++....+.
T Consensus 225 g~~l~sgs~dg~ 236 (343)
T 2xzm_R 225 GKYIATGGKDKK 236 (343)
T ss_dssp SSEEEEEETTCE
T ss_pred CCEEEEEcCCCe
Confidence 987765555443
No 192
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.88 E-value=1.4e-06 Score=79.92 Aligned_cols=206 Identities=15% Similarity=0.145 Sum_probs=120.7
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
..-.+++++|+|++++++..++.|..||..+++... .+.........+++++ +++++++
T Consensus 67 ~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~--------------------~~~~h~~~v~~~~~s~-~g~~las 125 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTH--------------------AIKLHCPWVMECAFAP-NGQSVAC 125 (380)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEE--------------------EEECCCTTCCCCEECT-TSSEEEE
T ss_pred cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccce--------------------EEecCCCCEEEEEECC-CCCEEEE
Confidence 345689999999988899999999999998764322 1112223356788999 5665555
Q ss_pred -eCCCcEEEEeCCCCeEEE----EeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeC
Q 018242 114 -DAYFGLLKVGPEGGLATA----VATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDP 188 (359)
Q Consensus 114 -~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 188 (359)
...+.+..++..+..... ......+ ....+..+.+.+++....++ ++..+.|..||.
T Consensus 126 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~g-h~~~v~~~~~~~~~~~~l~s-----------------~s~D~~i~~wd~ 187 (380)
T 3iz6_a 126 GGLDSACSIFNLSSQADRDGNMPVSRVLTG-HKGYASSCQYVPDQETRLIT-----------------GSGDQTCVLWDV 187 (380)
T ss_dssp CCSSSCCEEEECCCCSSCCCSSTTCCBCCC-CSSCCCCCBCCSSSSSCEEE-----------------ECTTSCEEEECT
T ss_pred eeCCCcEEEEECCCCccccCCccceeeccC-CCcceEEEEEecCCCCEEEE-----------------ECCCCcEEEEEc
Confidence 334457777765432100 0000011 11234556666654313333 134567999998
Q ss_pred CCCcEEEEeC------CCCCCceEEEcc-CCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEE
Q 018242 189 ATKQVTVLLG------NLSFPNGVALSE-DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWV 261 (359)
Q Consensus 189 ~~~~~~~~~~------~~~~p~gia~~~-d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv 261 (359)
.+++...... .......+++.+ +++ ++++...++.|..||+..... ....+....+....+++.++|++.+
T Consensus 188 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~sgs~D~~v~~wd~~~~~~-~~~~~~~h~~~v~~v~~~p~~~~l~ 265 (380)
T 3iz6_a 188 TTGQRISIFGSEFPSGHTADVLSLSINSLNAN-MFISGSCDTTVRLWDLRITSR-AVRTYHGHEGDINSVKFFPDGQRFG 265 (380)
T ss_dssp TTCCEEEEECCCSSSSCCSCEEEEEECSSSCC-EEEEEETTSCEEEEETTTTCC-CCEEECCCSSCCCEEEECTTSSEEE
T ss_pred CCCcEEEEeecccCCCCccCeEEEEeecCCCC-EEEEEECCCeEEEEECCCCCc-ceEEECCcCCCeEEEEEecCCCeEE
Confidence 8776543321 122335677766 555 777888889999999863211 1223332334457799999998777
Q ss_pred EEecCCCccccccccCCc-cceeee
Q 018242 262 GIHSRRKGISKLVLSFPW-IGNVLI 285 (359)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~-~g~~~~ 285 (359)
+....+. +..++. .++.+.
T Consensus 266 s~s~D~~-----i~lwd~~~~~~~~ 285 (380)
T 3iz6_a 266 TGSDDGT-----CRLFDMRTGHQLQ 285 (380)
T ss_dssp EECSSSC-----EEEEETTTTEEEE
T ss_pred EEcCCCe-----EEEEECCCCcEEE
Confidence 6655554 555543 454443
No 193
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.88 E-value=7.3e-07 Score=80.73 Aligned_cols=150 Identities=13% Similarity=0.107 Sum_probs=96.9
Q ss_pred ceEEEEecCCCeEEEEe-------------CCCcEEEEeCC--CCeEEEEeecC--CCccccccceEEEeC--CCC-EEE
Q 018242 98 PLGLCFNKTNGDLYIAD-------------AYFGLLKVGPE--GGLATAVATQS--EGIPFRFCNSLDIDQ--STG-IIY 157 (359)
Q Consensus 98 p~gi~~~~~~g~l~v~~-------------~~~~i~~~~~~--~~~~~~~~~~~--~~~~~~~~~~l~~d~--~g~-~l~ 157 (359)
|-.|++++ +|.+|++. ..+.|+++|++ +.+.+.+.... .....-.|++|.+.+ +|+ +||
T Consensus 52 ~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 52 SEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred cceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 55677887 88888886 23459999987 34554443221 112234788988765 453 599
Q ss_pred EEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEe----CCCCCCceEEEccCCCEEEEEec-------------
Q 018242 158 FTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLL----GNLSFPNGVALSEDGNYILLAET------------- 220 (359)
Q Consensus 158 v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~----~~~~~p~gia~~~d~~~l~v~~~------------- 220 (359)
|.+.... .....|++++++++....+. .....||.++++++|+ +|+++.
T Consensus 131 Vvnh~~~-------------~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~ 196 (355)
T 3sre_A 131 VVNHPGS-------------SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEM 196 (355)
T ss_dssp EEECSTT-------------CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHH
T ss_pred EEECCCC-------------CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchh
Confidence 9976421 12335889998765544332 2356799999999986 788764
Q ss_pred ----CCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCC-EEEEEecCC
Q 018242 221 ----TSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIHSRR 267 (359)
Q Consensus 221 ----~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~~~~ 267 (359)
..++|++++.. ..+....--..|+||++++||+ +|++....+
T Consensus 197 ~~~~~~g~vyr~d~~-----~~~~~~~~l~~pNGia~spDg~~lYvadt~~~ 243 (355)
T 3sre_A 197 HLGLAWSFVTYYSPN-----DVRVVAEGFDFANGINISPDGKYVYIAELLAH 243 (355)
T ss_dssp HTTCCCEEEEEECTT-----CCEEEEEEESSEEEEEECTTSSEEEEEEGGGT
T ss_pred hccCCccEEEEEECC-----eEEEeecCCcccCcceECCCCCEEEEEeCCCC
Confidence 24678888742 2233333123599999999995 999887654
No 194
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.87 E-value=1.2e-06 Score=82.28 Aligned_cols=159 Identities=13% Similarity=0.129 Sum_probs=101.9
Q ss_pred CCceEEEccCCCee-EEecCCCEEEEEEcC--CcceE-EEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeE
Q 018242 35 GPESLAFDALGEGP-YTGVSDGRIIKWHQD--QRRWL-HFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDL 110 (359)
Q Consensus 35 ~p~~i~~~~~G~~l-~~~~~~~~i~~~d~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l 110 (359)
...+++++++|+.+ +++..++.|..||.. +++.. .+. .......+..+++++++..|
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~-------------------~~~~~~~v~~~~~sp~~~~l 164 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRK-------------------RFCFSKRPNAISIAEDDTTV 164 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEE-------------------EEECSSCEEEEEECTTSSEE
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeee-------------------cccCCCCceEEEEcCCCCEE
Confidence 35689999999975 567788999999987 54322 211 01222446789999955566
Q ss_pred EEEeCCCcEEEEeCCCCeEEE-EeecCCCccccccceEEEeCC---CCEEEEEeCCCccccccceeeeeecCCCceEEEE
Q 018242 111 YIADAYFGLLKVGPEGGLATA-VATQSEGIPFRFCNSLDIDQS---TGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKY 186 (359)
Q Consensus 111 ~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~d~~---g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 186 (359)
++++..+.++.++..+++... ......+ ....+..++++|+ +++|+.+ ...+.|..|
T Consensus 165 ~~~~~~g~v~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~------------------~~d~~i~vw 225 (450)
T 2vdu_B 165 IIADKFGDVYSIDINSIPEEKFTQEPILG-HVSMLTDVHLIKDSDGHQFIITS------------------DRDEHIKIS 225 (450)
T ss_dssp EEEETTSEEEEEETTSCCCSSCCCCCSEE-CSSCEEEEEEEECTTSCEEEEEE------------------ETTSCEEEE
T ss_pred EEEeCCCcEEEEecCCcccccccceeeec-ccCceEEEEEcCCCCCCcEEEEE------------------cCCCcEEEE
Confidence 667665568888887654321 0000100 1235778999999 8734333 224578888
Q ss_pred eCCCCcEEEE-e-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC
Q 018242 187 DPATKQVTVL-L-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS 233 (359)
Q Consensus 187 d~~~~~~~~~-~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~ 233 (359)
|..++..... . ........++|+ +++.++ +...++.|..|++...
T Consensus 226 d~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~-s~~~d~~v~vwd~~~~ 272 (450)
T 2vdu_B 226 HYPQCFIVDKWLFGHKHFVSSICCG-KDYLLL-SAGGDDKIFAWDWKTG 272 (450)
T ss_dssp EESCTTCEEEECCCCSSCEEEEEEC-STTEEE-EEESSSEEEEEETTTC
T ss_pred ECCCCceeeeeecCCCCceEEEEEC-CCCEEE-EEeCCCeEEEEECCCC
Confidence 8776654322 2 334556889999 888555 5557789999998654
No 195
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.87 E-value=2.1e-06 Score=78.44 Aligned_cols=261 Identities=12% Similarity=0.089 Sum_probs=136.1
Q ss_pred CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCccccccccccc-CCcc-eEEEEecCCCeEEEEeCCCcEEE
Q 018242 44 LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHI-CGRP-LGLCFNKTNGDLYIADAYFGLLK 121 (359)
Q Consensus 44 ~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p-~gi~~~~~~g~l~v~~~~~~i~~ 121 (359)
+++ +|++..++.|+.+|+++++........... ..... .... ..+.++ ++.+|+++..+.|+.
T Consensus 53 ~~~-v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~------------~~~~~~~~~~~~~~~~~--~~~v~v~~~~g~l~a 117 (376)
T 3q7m_A 53 DNV-VYAADRAGLVKALNADDGKEIWSVSLAEKD------------GWFSKEPALLSGGVTVS--GGHVYIGSEKAQVYA 117 (376)
T ss_dssp TTE-EEEECTTSEEEEEETTTCCEEEEEECCC---------------CCSCCCCCEEEEEEEE--TTEEEEEETTSEEEE
T ss_pred CCE-EEEEcCCCeEEEEEccCCceeeeecCcccc------------ccccccCcccccCceEe--CCEEEEEcCCCEEEE
Confidence 455 899988899999999887654322111000 00000 0111 223333 899999987778999
Q ss_pred EeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCCCC
Q 018242 122 VGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLS 201 (359)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~ 201 (359)
+|.++|+....... .... ....+++ ++. +|++. ..+.|+.+|+.+++.........
T Consensus 118 ~d~~tG~~~W~~~~-~~~~---~~~p~~~-~~~-v~v~~------------------~~g~l~~~d~~tG~~~W~~~~~~ 173 (376)
T 3q7m_A 118 LNTSDGTVAWQTKV-AGEA---LSRPVVS-DGL-VLIHT------------------SNGQLQALNEADGAVKWTVNLDM 173 (376)
T ss_dssp EETTTCCEEEEEEC-SSCC---CSCCEEE-TTE-EEEEC------------------TTSEEEEEETTTCCEEEEEECCC
T ss_pred EECCCCCEEEEEeC-CCce---EcCCEEE-CCE-EEEEc------------------CCCeEEEEECCCCcEEEEEeCCC
Confidence 99998876532221 1111 1112232 566 99982 34679999998887765432211
Q ss_pred C------CceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCC---------CCCceEECCCCCEEEEEecC
Q 018242 202 F------PNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPG---------FPDNIKRSPRGGFWVGIHSR 266 (359)
Q Consensus 202 ~------p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---------~p~~i~~d~~G~lwv~~~~~ 266 (359)
. ....++. ++ .+|+. +.++.|+.++....+...........+ ......+ .+|.+|+++..+
T Consensus 174 ~~~~~~~~~~~~~~-~~-~v~~g-~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~v~~~~~~g 249 (376)
T 3q7m_A 174 PSLSLRGESAPTTA-FG-AAVVG-GDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV-VNGVVFALAYNG 249 (376)
T ss_dssp -----CCCCCCEEE-TT-EEEEC-CTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE-ETTEEEEECTTS
T ss_pred CceeecCCCCcEEE-CC-EEEEE-cCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE-ECCEEEEEecCc
Confidence 1 1223333 33 45554 566789999975442211111000000 0011222 357899987554
Q ss_pred CCccccccccCC-ccceeeecCCccceee----eeecccccCcceEEEEECC-CCCEEEEEEccCCceeeceEEEEEeCC
Q 018242 267 RKGISKLVLSFP-WIGNVLIKLPIDIVKI----HSSLVKLSGNGGMAMRISE-QGNVLEILEEIGRKMWRSISEVEEKDG 340 (359)
Q Consensus 267 ~~~~~~~~~~~~-~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~g~~~~~~~~~~~~~g 340 (359)
. +..++ .+|+.+...+.+.... ....+-.... +.++++|. +|+.+..+....+. ........++
T Consensus 250 ~------l~~~d~~tG~~~w~~~~~~~~~~~~~~~~l~~~~~~-g~l~~~d~~tG~~~w~~~~~~~~---~~~~~~~~~~ 319 (376)
T 3q7m_A 250 N------LTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQN-DRVMALTIDGGVTLWTQSDLLHR---LLTSPVLYNG 319 (376)
T ss_dssp C------EEEEETTTCCEEEEECCCCEEEEEEETTEEEEEETT-CCEEEEETTTCCEEEEECTTTTS---CCCCCEEETT
T ss_pred E------EEEEECCCCcEEeeccCCCCCCceEECCEEEEEcCC-CeEEEEECCCCcEEEeecccCCC---cccCCEEECC
Confidence 3 55554 4787776654432110 0011111222 46777775 46666554321121 1222233588
Q ss_pred EEEEecCCCCeEEEEcCC
Q 018242 341 NLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 341 ~l~ig~~~~~~l~~~~~~ 358 (359)
+||+++. +..|..++..
T Consensus 320 ~l~v~~~-~g~l~~~d~~ 336 (376)
T 3q7m_A 320 NLVVGDS-EGYLHWINVE 336 (376)
T ss_dssp EEEEECT-TSEEEEEETT
T ss_pred EEEEEeC-CCeEEEEECC
Confidence 9999986 5678888764
No 196
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.87 E-value=1.4e-07 Score=91.62 Aligned_cols=185 Identities=11% Similarity=-0.041 Sum_probs=111.9
Q ss_pred CCceEEEccCCCeeEEecC---C--CEEEEEEc--CCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCC
Q 018242 35 GPESLAFDALGEGPYTGVS---D--GRIIKWHQ--DQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTN 107 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~---~--~~i~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~ 107 (359)
...+++++|| +++|++.. + ..|+.++. ++... . +... ......++++++
T Consensus 66 ~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~---------------------l~~~-~~~~~~~~s~dg 121 (582)
T 3o4h_A 66 SVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-R---------------------LEAV-KPMRILSGVDTG 121 (582)
T ss_dssp EECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-E---------------------CTTS-CSBEEEEEEECS
T ss_pred ccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-c---------------------ccCC-CCceeeeeCCCC
Confidence 3456778888 66776553 2 26777777 44311 1 1111 112345667644
Q ss_pred Ce-EEEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEE
Q 018242 108 GD-LYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKY 186 (359)
Q Consensus 108 g~-l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 186 (359)
+. ++++...+++..++.++++.+.+... . . ..++++|||++|+.+... ......|+.+
T Consensus 122 ~~~~~~s~~~~~~~l~d~~~g~~~~l~~~-~-----~-~~~~~spDG~~la~~~~~--------------~~~~~~i~~~ 180 (582)
T 3o4h_A 122 EAVVFTGATEDRVALYALDGGGLRELARL-P-----G-FGFVSDIRGDLIAGLGFF--------------GGGRVSLFTS 180 (582)
T ss_dssp SCEEEEEECSSCEEEEEEETTEEEEEEEE-S-----S-CEEEEEEETTEEEEEEEE--------------ETTEEEEEEE
T ss_pred CeEEEEecCCCCceEEEccCCcEEEeecC-C-----C-ceEEECCCCCEEEEEEEc--------------CCCCeEEEEE
Confidence 34 55555556677889888887665431 1 1 678999999955544110 1112469999
Q ss_pred eCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCC--EEEEEEcCCCCCcceeEeecCCCCCCceE--------ECCC
Q 018242 187 DPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSC--RILRYWLKTSKAGTIEIVAQLPGFPDNIK--------RSPR 256 (359)
Q Consensus 187 d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~p~~i~--------~d~~ 256 (359)
|.++++.+.+.........++|+|||+.++.++ .++ .|++|++++.+ ...+......+.+++ +++|
T Consensus 181 d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~-~~~~~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~spd 256 (582)
T 3o4h_A 181 NLSSGGLRVFDSGEGSFSSASISPGMKVTAGLE-TAREARLVTVDPRDGS---VEDLELPSKDFSSYRPTAITWLGYLPD 256 (582)
T ss_dssp ETTTCCCEEECCSSCEEEEEEECTTSCEEEEEE-CSSCEEEEEECTTTCC---EEECCCSCSHHHHHCCSEEEEEEECTT
T ss_pred cCCCCCceEeecCCCccccceECCCCCEEEEcc-CCCeeEEEEEcCCCCc---EEEccCCCcChhhhhhccccceeEcCC
Confidence 998888776654444457899999999888444 445 89999976542 222211222233455 9999
Q ss_pred CCEEEEEecCCC
Q 018242 257 GGFWVGIHSRRK 268 (359)
Q Consensus 257 G~lwv~~~~~~~ 268 (359)
|.++++....+.
T Consensus 257 g~~~~~~~~~g~ 268 (582)
T 3o4h_A 257 GRLAVVARREGR 268 (582)
T ss_dssp SCEEEEEEETTE
T ss_pred CcEEEEEEcCCc
Confidence 988887665553
No 197
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.87 E-value=1.9e-07 Score=85.52 Aligned_cols=180 Identities=8% Similarity=-0.008 Sum_probs=106.6
Q ss_pred eEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcc--eEEEEecCCCeEEEEe-
Q 018242 38 SLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRP--LGLCFNKTNGDLYIAD- 114 (359)
Q Consensus 38 ~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~gi~~~~~~g~l~v~~- 114 (359)
+++++|||+.++....+..|+.+|..+++.+.+... ..... ....+++ ++.++++.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~--------------------~~~~~~~~~~~~~~-dg~~l~~~~ 143 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV--------------------PAEWVGYGTWVANS-DCTKLVGIE 143 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC--------------------CTTEEEEEEEEECT-TSSEEEEEE
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec--------------------hhhcccccceeECC-CCCeecccc
Confidence 678999999787777778999999998754433211 00111 1123455 56655531
Q ss_pred ----------------------CCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeC-CCCEEEEEeCCCccccccce
Q 018242 115 ----------------------AYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQ-STGIIYFTDSSSQFQRRNHI 171 (359)
Q Consensus 115 ----------------------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~-~g~~l~v~d~~~~~~~~~~~ 171 (359)
....|+++|.++++.+.+... ...+..+.++| +|++|.++.....
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-----~~~~~~~~~sp~dg~~l~~~~~~~~------- 211 (388)
T 3pe7_A 144 IRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE-----NQWLGHPIYRPYDDSTVAFCHEGPH------- 211 (388)
T ss_dssp EEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE-----SSCEEEEEEETTEEEEEEEEECSCT-------
T ss_pred ccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC-----CccccccEECCCCCCEEEEEEecCC-------
Confidence 123589999998887665431 12456789999 9986655532100
Q ss_pred eeeeecCCCceEEEEeCCCCcEEEEeCCCC--CCceEEEccCCCEE-EEEecCCC---EEEEEEcCCCCCcceeEeecCC
Q 018242 172 SVILSGDKTGRLMKYDPATKQVTVLLGNLS--FPNGVALSEDGNYI-LLAETTSC---RILRYWLKTSKAGTIEIVAQLP 245 (359)
Q Consensus 172 ~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~--~p~gia~~~d~~~l-~v~~~~~~---~i~~~~~~~~~~~~~~~~~~~~ 245 (359)
......|+.++.+++..+.+..... .....+++|||+.+ |++..... .|++|+++..+. +.+...+
T Consensus 212 -----~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~---~~l~~~~ 283 (388)
T 3pe7_A 212 -----DLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN---RQLTSMP 283 (388)
T ss_dssp -----TTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE---EEEEEEC
T ss_pred -----CCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce---EEEEcCC
Confidence 0113479999988766655543221 23467899999976 44443332 399999765432 2222222
Q ss_pred C------CCCceEECCCCC
Q 018242 246 G------FPDNIKRSPRGG 258 (359)
Q Consensus 246 ~------~p~~i~~d~~G~ 258 (359)
+ .+++++++++|+
T Consensus 284 ~~~~~~~~~~~~~~spdg~ 302 (388)
T 3pe7_A 284 ACSHLMSNYDGSLMVGDGS 302 (388)
T ss_dssp CEEEEEECTTSSEEEEEEC
T ss_pred CceeeeecCCCCeEccCCC
Confidence 1 145566667665
No 198
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.86 E-value=9.2e-07 Score=81.57 Aligned_cols=198 Identities=11% Similarity=-0.006 Sum_probs=121.3
Q ss_pred CceEEEcc-CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEE-EE
Q 018242 36 PESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLY-IA 113 (359)
Q Consensus 36 p~~i~~~~-~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~-v~ 113 (359)
..++++++ ++++++++..++.|..||..+++..... .. .+..+.........+++++++.+++ .+
T Consensus 84 V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~---------~~----~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 150 (402)
T 2aq5_A 84 VLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPL---------RE----PVITLEGHTKRVGIVAWHPTAQNVLLSA 150 (402)
T ss_dssp EEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCB---------CS----CSEEEECCSSCEEEEEECSSBTTEEEEE
T ss_pred EEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcccc---------CC----ceEEecCCCCeEEEEEECcCCCCEEEEE
Confidence 35899999 8998888999999999998775211000 00 0002222334567899999443444 45
Q ss_pred eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcE
Q 018242 114 DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQV 193 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 193 (359)
...+.|..+|..+++....... . .....+..++++++|++|+.+ ...+.|..||..+++.
T Consensus 151 ~~dg~i~iwd~~~~~~~~~~~~-~-~~~~~v~~~~~~~~~~~l~~~------------------~~d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 151 GCDNVILVWDVGTGAAVLTLGP-D-VHPDTIYSVDWSRDGALICTS------------------CRDKRVRVIEPRKGTV 210 (402)
T ss_dssp ETTSCEEEEETTTTEEEEEECT-T-TCCSCEEEEEECTTSSCEEEE------------------ETTSEEEEEETTTTEE
T ss_pred cCCCEEEEEECCCCCccEEEec-C-CCCCceEEEEECCCCCEEEEE------------------ecCCcEEEEeCCCCce
Confidence 5555688999988865433210 1 112357789999999944444 2356899999887765
Q ss_pred EEEe-CC--CCCCceEEEccCCCEEEEEe---cCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEE-EEecC
Q 018242 194 TVLL-GN--LSFPNGVALSEDGNYILLAE---TTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWV-GIHSR 266 (359)
Q Consensus 194 ~~~~-~~--~~~p~gia~~~d~~~l~v~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv-~~~~~ 266 (359)
.... .. ...+..++++++++. +++. ..++.|..|++....................++++++|+..+ +....
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~-l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~d 289 (402)
T 2aq5_A 211 VAEKDRPHEGTRPVHAVFVSEGKI-LTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGD 289 (402)
T ss_dssp EEEEECSSCSSSCCEEEECSTTEE-EEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTC
T ss_pred eeeeccCCCCCcceEEEEcCCCcE-EEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCC
Confidence 4433 22 223678999999874 4444 577899999986543211111111223356688899998654 44333
Q ss_pred C
Q 018242 267 R 267 (359)
Q Consensus 267 ~ 267 (359)
+
T Consensus 290 g 290 (402)
T 2aq5_A 290 S 290 (402)
T ss_dssp S
T ss_pred C
Confidence 3
No 199
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.86 E-value=3.9e-07 Score=84.11 Aligned_cols=190 Identities=11% Similarity=0.026 Sum_probs=122.6
Q ss_pred CCCceEEEccCC-CeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccc--cccCCcceEEEEecCCCeE
Q 018242 34 IGPESLAFDALG-EGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAK--EHICGRPLGLCFNKTNGDL 110 (359)
Q Consensus 34 ~~p~~i~~~~~G-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~gi~~~~~~g~l 110 (359)
....++++.++| ++++++..++.|..||..+++... .+ .........+++++++..+
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~--------------------~~~~~~~~~~v~~~~~~~~~~~l 191 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVL--------------------TLGPDVHPDTIYSVDWSRDGALI 191 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEE--------------------EECTTTCCSCEEEEEECTTSSCE
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccE--------------------EEecCCCCCceEEEEECCCCCEE
Confidence 345689999998 678888889999999998764322 11 2223446789999944556
Q ss_pred EEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCC
Q 018242 111 YIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPAT 190 (359)
Q Consensus 111 ~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 190 (359)
+++...+.|..+|+.+++......... ....+..++++++|+ ++++... ....+.|..||..+
T Consensus 192 ~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~l~~g~~--------------~~~d~~i~iwd~~~ 254 (402)
T 2aq5_A 192 CTSCRDKRVRVIEPRKGTVVAEKDRPH--EGTRPVHAVFVSEGK-ILTTGFS--------------RMSERQVALWDTKH 254 (402)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSS--CSSSCCEEEECSTTE-EEEEEEC--------------TTCCEEEEEEETTB
T ss_pred EEEecCCcEEEEeCCCCceeeeeccCC--CCCcceEEEEcCCCc-EEEEecc--------------CCCCceEEEEcCcc
Confidence 666655568899998877543321111 122367899999998 5554200 02356788999876
Q ss_pred CcE--EEE-eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec--CCCCCCceEECCCCCEEE
Q 018242 191 KQV--TVL-LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ--LPGFPDNIKRSPRGGFWV 261 (359)
Q Consensus 191 ~~~--~~~-~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~p~~i~~d~~G~lwv 261 (359)
+.. ... .........++++++++.++++...++.|..|++..... ....+.. ......++++.++|.+.+
T Consensus 255 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~-~~~~l~~~~~~~~v~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 255 LEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP-FLHYLSMFSSKESQRGMGYMPKRGLEV 329 (402)
T ss_dssp CSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT-CEEEEEEECCSSCCSEEEECCGGGSCG
T ss_pred ccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc-ceEeecccccCCcccceEEecccccce
Confidence 432 122 233345678999999999888888889999999875431 0222222 224456788888775443
No 200
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.86 E-value=4.8e-06 Score=87.99 Aligned_cols=156 Identities=12% Similarity=0.061 Sum_probs=104.2
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEe
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIAD 114 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~ 114 (359)
.-.+++++++|+++.++..++.|..||..+++... .+.........+++++++..+..+.
T Consensus 617 ~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~--------------------~~~~h~~~v~~~~~s~~~~~l~s~~ 676 (1249)
T 3sfz_A 617 AVYHACFSQDGQRIASCGADKTLQVFKAETGEKLL--------------------DIKAHEDEVLCCAFSSDDSYIATCS 676 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE--------------------EECCCSSCEEEEEECTTSSEEEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEE--------------------EeccCCCCEEEEEEecCCCEEEEEe
Confidence 44588999999988888899999999998764321 2223334567899999444455555
Q ss_pred CCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCE-EEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcE
Q 018242 115 AYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGI-IYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQV 193 (359)
Q Consensus 115 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 193 (359)
..+.|..+|..+++....... ....+..+.+.++++. +.++ ++..+.|..||..+++.
T Consensus 677 ~d~~v~vwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~l~s-----------------g~~d~~v~vwd~~~~~~ 735 (1249)
T 3sfz_A 677 ADKKVKIWDSATGKLVHTYDE----HSEQVNCCHFTNKSNHLLLAT-----------------GSNDFFLKLWDLNQKEC 735 (1249)
T ss_dssp TTSEEEEEETTTCCEEEEEEC----CSSCEEEEEECSSSSCCEEEE-----------------EETTSCEEEEETTSSSE
T ss_pred CCCeEEEEECCCCceEEEEcC----CCCcEEEEEEecCCCceEEEE-----------------EeCCCeEEEEECCCcch
Confidence 555688999988765432221 1235667888885332 3333 12356788899887765
Q ss_pred EEE-eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCC
Q 018242 194 TVL-LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKT 232 (359)
Q Consensus 194 ~~~-~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~ 232 (359)
... .........++++|+++. +++.+.++.|..|++..
T Consensus 736 ~~~~~~h~~~v~~~~~sp~~~~-l~s~s~dg~v~vwd~~~ 774 (1249)
T 3sfz_A 736 RNTMFGHTNSVNHCRFSPDDEL-LASCSADGTLRLWDVRS 774 (1249)
T ss_dssp EEEECCCSSCEEEEEECSSTTE-EEEEESSSEEEEEEGGG
T ss_pred hheecCCCCCEEEEEEecCCCE-EEEEECCCeEEEEeCCC
Confidence 543 333445678899999984 55556778999999754
No 201
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.86 E-value=8.4e-07 Score=82.81 Aligned_cols=205 Identities=9% Similarity=0.046 Sum_probs=122.2
Q ss_pred CCCceEEEccC-CCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE
Q 018242 34 IGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI 112 (359)
Q Consensus 34 ~~p~~i~~~~~-G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v 112 (359)
..+.++++.++ +.+++++..++.|..|+..+..-. +. .... ......+........++++++.+..+++
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~--------~~-~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 198 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSK--------PE-PSGE-CQPDLRLRGHQKEGYGLSWNPNLNGYLL 198 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSS--------CC-TTCC-CCCSEEEECCSSCCCCEEECTTSTTEEE
T ss_pred CcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccc--------cC-cccc-CCCcEEecCCCCCeEEEEeCCCCCCeEE
Confidence 47889999997 677778888899999998652000 00 0000 0000122223345678999994442444
Q ss_pred -EeCCCcEEEEeCCCCeE--EEE--eecCCCccccccceEEEeC-CCCEEEEEeCCCccccccceeeeeecCCCceEEEE
Q 018242 113 -ADAYFGLLKVGPEGGLA--TAV--ATQSEGIPFRFCNSLDIDQ-STGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKY 186 (359)
Q Consensus 113 -~~~~~~i~~~~~~~~~~--~~~--~~~~~~~~~~~~~~l~~d~-~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 186 (359)
+...+.|..++..++.. ..+ ...... ....++.+++++ +++ ++++. ...+.|..|
T Consensus 199 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~-~l~s~-----------------~~dg~i~i~ 259 (430)
T 2xyi_A 199 SASDDHTICLWDINATPKEHRVIDAKNIFTG-HTAVVEDVAWHLLHES-LFGSV-----------------ADDQKLMIW 259 (430)
T ss_dssp EECTTSCEEEEETTSCCBGGGEEECSEEECC-CSSCEEEEEECSSCTT-EEEEE-----------------ETTSEEEEE
T ss_pred EEeCCCeEEEEeCCCCCCCCceeccceeecC-CCCCEeeeEEeCCCCC-EEEEE-----------------eCCCeEEEE
Confidence 44444588889876321 000 000111 123578899999 555 66662 235678899
Q ss_pred eCCCC----cEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCC-EEE
Q 018242 187 DPATK----QVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWV 261 (359)
Q Consensus 187 d~~~~----~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv 261 (359)
|..++ ....+......++.++++|+++.++++...++.|..|++..... ....+....+....+++.++|. +++
T Consensus 260 d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~-~~~~~~~h~~~v~~i~~sp~~~~~l~ 338 (430)
T 2xyi_A 260 DTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL-KLHSFESHKDEIFQVQWSPHNETILA 338 (430)
T ss_dssp ETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS-CSEEEECCSSCEEEEEECSSCTTEEE
T ss_pred ECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC-CeEEeecCCCCEEEEEECCCCCCEEE
Confidence 98754 22233344456789999999987888888899999999865321 1222322233356689999884 666
Q ss_pred EEecCCC
Q 018242 262 GIHSRRK 268 (359)
Q Consensus 262 ~~~~~~~ 268 (359)
+....+.
T Consensus 339 s~~~d~~ 345 (430)
T 2xyi_A 339 SSGTDRR 345 (430)
T ss_dssp EEETTSC
T ss_pred EEeCCCc
Confidence 5554443
No 202
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.85 E-value=4.7e-06 Score=76.11 Aligned_cols=251 Identities=12% Similarity=0.062 Sum_probs=135.4
Q ss_pred cCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCCCcEEEE
Q 018242 43 ALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYFGLLKV 122 (359)
Q Consensus 43 ~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~~~i~~~ 122 (359)
.+|+ +|+++.++.|+.+|+.+++...-.... ......| .+. ++.+|++...+.|+.+
T Consensus 102 ~~~~-v~v~~~~g~l~a~d~~tG~~~W~~~~~-----------------~~~~~~p---~~~--~~~v~v~~~~g~l~~~ 158 (376)
T 3q7m_A 102 SGGH-VYIGSEKAQVYALNTSDGTVAWQTKVA-----------------GEALSRP---VVS--DGLVLIHTSNGQLQAL 158 (376)
T ss_dssp ETTE-EEEEETTSEEEEEETTTCCEEEEEECS-----------------SCCCSCC---EEE--TTEEEEECTTSEEEEE
T ss_pred eCCE-EEEEcCCCEEEEEECCCCCEEEEEeCC-----------------CceEcCC---EEE--CCEEEEEcCCCeEEEE
Confidence 3455 899998899999999887644321110 0011112 222 7899998766679999
Q ss_pred eCCCCeEEEEeecCCCc-cccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCCCC
Q 018242 123 GPEGGLATAVATQSEGI-PFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLS 201 (359)
Q Consensus 123 ~~~~~~~~~~~~~~~~~-~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~ 201 (359)
|.++|+........... ........+++ ++. +|++. ..+.|+.+|+++++.........
T Consensus 159 d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~-v~~g~------------------~~g~l~~~d~~tG~~~w~~~~~~ 218 (376)
T 3q7m_A 159 NEADGAVKWTVNLDMPSLSLRGESAPTTA-FGA-AVVGG------------------DNGRVSAVLMEQGQMIWQQRISQ 218 (376)
T ss_dssp ETTTCCEEEEEECCC-----CCCCCCEEE-TTE-EEECC------------------TTTEEEEEETTTCCEEEEEECCC
T ss_pred ECCCCcEEEEEeCCCCceeecCCCCcEEE-CCE-EEEEc------------------CCCEEEEEECCCCcEEEEEeccc
Confidence 99888764332211100 00011222333 566 88872 24679999998887765432110
Q ss_pred ------------CCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-CCCCCCceEECCCCCEEEEEecCCC
Q 018242 202 ------------FPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGGFWVGIHSRRK 268 (359)
Q Consensus 202 ------------~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwv~~~~~~~ 268 (359)
......+ .+..+|+.. .++.++.++....+. .+.. .+. +..+..+ ++++|+++..+.
T Consensus 219 ~~~~~~~~~~~~~~~~p~~--~~~~v~~~~-~~g~l~~~d~~tG~~----~w~~~~~~-~~~~~~~-~~~l~~~~~~g~- 288 (376)
T 3q7m_A 219 ATGSTEIDRLSDVDTTPVV--VNGVVFALA-YNGNLTALDLRSGQI----MWKRELGS-VNDFIVD-GNRIYLVDQNDR- 288 (376)
T ss_dssp -----------CCCCCCEE--ETTEEEEEC-TTSCEEEEETTTCCE----EEEECCCC-EEEEEEE-TTEEEEEETTCC-
T ss_pred CCCCcccccccccCCCcEE--ECCEEEEEe-cCcEEEEEECCCCcE----EeeccCCC-CCCceEE-CCEEEEEcCCCe-
Confidence 0011122 234467764 567899999754321 1222 222 3345554 578999886544
Q ss_pred ccccccccCC-ccceeeecCC-ccceeee------eecccccCcceEEEEECC-CCCEEEEEEccCCceeeceEEEEEeC
Q 018242 269 GISKLVLSFP-WIGNVLIKLP-IDIVKIH------SSLVKLSGNGGMAMRISE-QGNVLEILEEIGRKMWRSISEVEEKD 339 (359)
Q Consensus 269 ~~~~~~~~~~-~~g~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~g~~~~~~~~~~~~~ 339 (359)
+..++ .+|+.+.+.+ .+..... ...+-.... +.++++|+ +|+.+..+....+.. .......+
T Consensus 289 -----l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~~-g~l~~~d~~tG~~~~~~~~~~~~~---~~~~~~~~ 359 (376)
T 3q7m_A 289 -----VMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSE-GYLHWINVEDGRFVAQQKVDSSGF---QTEPVAAD 359 (376)
T ss_dssp -----EEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEECTT-SEEEEEETTTCCEEEEEECCTTCB---CSCCEEET
T ss_pred -----EEEEECCCCcEEEeecccCCCcccCCEEECCEEEEEeCC-CeEEEEECCCCcEEEEEecCCCcc---eeCCEEEC
Confidence 55554 4777765543 1111111 111112223 56788884 466666654322211 11223458
Q ss_pred CEEEEecCCCCeEEEEc
Q 018242 340 GNLWIGSVNMPYAGLYN 356 (359)
Q Consensus 340 g~l~ig~~~~~~l~~~~ 356 (359)
++||+++. +..|..++
T Consensus 360 ~~l~v~~~-~G~l~~~~ 375 (376)
T 3q7m_A 360 GKLLIQAK-DGTVYSIT 375 (376)
T ss_dssp TEEEEEBT-TSCEEEEE
T ss_pred CEEEEEeC-CCEEEEEe
Confidence 99999997 56677765
No 203
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.84 E-value=2.9e-06 Score=77.18 Aligned_cols=201 Identities=11% Similarity=0.106 Sum_probs=126.8
Q ss_pred CCCCCceEEEccCCCeeEEecCC---------------CEEEEEEcCCc--c-eEEEeecCCCCCCCCCCcccccccccc
Q 018242 32 GAIGPESLAFDALGEGPYTGVSD---------------GRIIKWHQDQR--R-WLHFARTSPNRDGCEGAYEYDHAAKEH 93 (359)
Q Consensus 32 ~~~~p~~i~~~~~G~~l~~~~~~---------------~~i~~~d~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (359)
.+.+..++.+|+.|++|++++.. .+|..+|+.++ + .+++..+. ....
T Consensus 85 ~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~---------------~~~~ 149 (381)
T 3q6k_A 85 ELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPT---------------RLVE 149 (381)
T ss_dssp SSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCG---------------GGCC
T ss_pred ceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCH---------------Hhcc
Confidence 57888899999999955566541 27899999987 5 33443211 1111
Q ss_pred cCCcceEEEEe-c------CCCeEEEEeCC-CcEEEEeCCCCeEEEEeec-C-C---------Cccc---cccceEEEeC
Q 018242 94 ICGRPLGLCFN-K------TNGDLYIADAY-FGLLKVGPEGGLATAVATQ-S-E---------GIPF---RFCNSLDIDQ 151 (359)
Q Consensus 94 ~~~~p~gi~~~-~------~~g~l~v~~~~-~~i~~~~~~~~~~~~~~~~-~-~---------~~~~---~~~~~l~~d~ 151 (359)
.......+++| . +++.+||++.. .+|+++|..+++..++... . + +..+ ..+.+|+.+|
T Consensus 150 ~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp 229 (381)
T 3q6k_A 150 KPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGD 229 (381)
T ss_dssp CGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECC
T ss_pred cCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecC
Confidence 11234578888 2 15779999874 4799999998876554421 0 1 1111 3677899998
Q ss_pred C----CCEEEEEeCCCccccccceeeeeecCCCceEEEEeCC-------CCcEEEEeCCCCCCc--eEEEc-cCCCEEEE
Q 018242 152 S----TGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPA-------TKQVTVLLGNLSFPN--GVALS-EDGNYILL 217 (359)
Q Consensus 152 ~----g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~-------~~~~~~~~~~~~~p~--gia~~-~d~~~l~v 217 (359)
+ ++.||+.-..+. .+|++..+ ...++.+-....... +++++ .+| .||+
T Consensus 230 ~~~~~~~~LYf~plss~-----------------~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G-~ly~ 291 (381)
T 3q6k_A 230 RDSEGNRPAYYLAGSAI-----------------KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTK-VIFF 291 (381)
T ss_dssp CCTTSCCEEEEEESSCS-----------------EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTC-EEEE
T ss_pred CcCCCCeEEEEEECCCC-----------------cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCC-eEEE
Confidence 8 788999854321 45555321 123333322221223 56776 445 5999
Q ss_pred EecCCCEEEEEEcCC-CC-CcceeEeec-C-CCCCCceEECCCCCEEEEEec
Q 018242 218 AETTSCRILRYWLKT-SK-AGTIEIVAQ-L-PGFPDNIKRSPRGGFWVGIHS 265 (359)
Q Consensus 218 ~~~~~~~i~~~~~~~-~~-~~~~~~~~~-~-~~~p~~i~~d~~G~lwv~~~~ 265 (359)
++...+.|.+|+.+. +- ....+.+.. . --.|+++.+|.+|.||+.+..
T Consensus 292 ~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 292 AEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp EESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEECS
T ss_pred EeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEECc
Confidence 999999999999765 31 123444443 2 236999999999999998865
No 204
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.84 E-value=4.5e-06 Score=75.09 Aligned_cols=166 Identities=8% Similarity=0.015 Sum_probs=104.6
Q ss_pred EeeCCCCCCceEEEccC----CCeeEEecCCCEEEEEEcCCcce-EEEeecCCCCCCCCCCcccccccccccCCcceEEE
Q 018242 28 YQIEGAIGPESLAFDAL----GEGPYTGVSDGRIIKWHQDQRRW-LHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLC 102 (359)
Q Consensus 28 ~~~~~~~~p~~i~~~~~----G~~l~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 102 (359)
+..+--....+++++|+ ...++++..++.|..||..+++. ..+... ...........++
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~----------------~~~~~~~~v~~~~ 76 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSY----------------VDADADENFYTCA 76 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEE----------------ECSCTTCCEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeec----------------cccCCCCcEEEEE
Confidence 33333345668999973 34467777778999999886532 222200 0011223467888
Q ss_pred EecCC---Ce-EEEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeC-CCCEEEEEeCCCccccccceeeeeec
Q 018242 103 FNKTN---GD-LYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQ-STGIIYFTDSSSQFQRRNHISVILSG 177 (359)
Q Consensus 103 ~~~~~---g~-l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~-~g~~l~v~d~~~~~~~~~~~~~~~~~ 177 (359)
++++. +. |+++...+.|..++..+++....... ....+..+.++| +++ +.++-
T Consensus 77 ~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~-~l~s~----------------- 134 (366)
T 3k26_A 77 WTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG----HGNAINELKFHPRDPN-LLLSV----------------- 134 (366)
T ss_dssp EEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEES----CCSCEEEEEECSSCTT-EEEEE-----------------
T ss_pred eccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecC----CCCcEEEEEECCCCCC-EEEEE-----------------
Confidence 98842 34 44455555688999887765432221 123577899999 888 44441
Q ss_pred CCCceEEEEeCCCCcEEEEe----CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCC
Q 018242 178 DKTGRLMKYDPATKQVTVLL----GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKT 232 (359)
Q Consensus 178 ~~~g~v~~~d~~~~~~~~~~----~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~ 232 (359)
...+.|..||..+++..... ........++++|+++.++ +...++.|..|++..
T Consensus 135 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 135 SKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIM-SCGMDHSLKLWRINS 192 (366)
T ss_dssp ETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEE-EEETTSCEEEEESCS
T ss_pred eCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEE-EecCCCCEEEEECCC
Confidence 23567999998877655443 2344567899999998554 445678999999764
No 205
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.84 E-value=1.4e-06 Score=79.55 Aligned_cols=200 Identities=13% Similarity=0.058 Sum_probs=112.8
Q ss_pred EEEccCCCeeEEecC-CC--EEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCc-ceEEEEecCCCeEEEEe
Q 018242 39 LAFDALGEGPYTGVS-DG--RIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGR-PLGLCFNKTNGDLYIAD 114 (359)
Q Consensus 39 i~~~~~G~~l~~~~~-~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~gi~~~~~~g~l~v~~ 114 (359)
.+++|||+.++.... ++ .|+.+|..+++.+.+. ..... ..+.++++++..|+++.
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt---------------------~~~~~~~~~~~~spdg~~l~~~~ 99 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLT---------------------EGRGDNTFGGFLSPDDDALFYVK 99 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECC---------------------CSSCBCSSSCEECTTSSEEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEee---------------------eCCCCCccceEEcCCCCEEEEEe
Confidence 679999985555444 44 5999999887544321 11111 22567899566677776
Q ss_pred CCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCC--Ccccc-ccce--eeeeecCCCceEEEEeCC
Q 018242 115 AYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSS--SQFQR-RNHI--SVILSGDKTGRLMKYDPA 189 (359)
Q Consensus 115 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~--~~~~~-~~~~--~~~~~~~~~g~v~~~d~~ 189 (359)
....|++++..+++.+.+...... .........+++|+ +.++... ..+.. ..+. ...........|+.+|.+
T Consensus 100 ~~~~l~~~d~~~g~~~~~~~~~~~--~~~~~~~~~~~dg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 176 (388)
T 3pe7_A 100 DGRNLMRVDLATLEENVVYQVPAE--WVGYGTWVANSDCT-KLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK 176 (388)
T ss_dssp TTTEEEEEETTTCCEEEEEECCTT--EEEEEEEEECTTSS-EEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT
T ss_pred CCCeEEEEECCCCcceeeeechhh--cccccceeECCCCC-eeccccccCcccccccccchhhhhhccCCcceEEEEECC
Confidence 555799999999886655432111 11111234589998 5443110 00000 0000 000011234579999999
Q ss_pred CCcEEEEeCCCCCCceEEEcc-CCCEEEEEecC-----CCEEEEEEcCCCCCcceeEeecCC-C-CCCceEECCCCC-EE
Q 018242 190 TKQVTVLLGNLSFPNGVALSE-DGNYILLAETT-----SCRILRYWLKTSKAGTIEIVAQLP-G-FPDNIKRSPRGG-FW 260 (359)
Q Consensus 190 ~~~~~~~~~~~~~p~gia~~~-d~~~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~-~-~p~~i~~d~~G~-lw 260 (359)
+++.+.+.........++++| |++.+++.... ...|+.++.++... +.+.... + .....+++++|+ |+
T Consensus 177 ~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~---~~l~~~~~~~~~~~~~~spdg~~l~ 253 (388)
T 3pe7_A 177 TGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM---RKVKTHAEGESCTHEFWVPDGSALV 253 (388)
T ss_dssp TCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC---EESCCCCTTEEEEEEEECTTSSCEE
T ss_pred CCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce---EEeeeCCCCcccccceECCCCCEEE
Confidence 888776654444567889999 99876555443 34899998764322 2222211 1 122467899996 64
Q ss_pred EEEec
Q 018242 261 VGIHS 265 (359)
Q Consensus 261 v~~~~ 265 (359)
.....
T Consensus 254 ~~~~~ 258 (388)
T 3pe7_A 254 YVSYL 258 (388)
T ss_dssp EEEEE
T ss_pred EEecC
Confidence 44443
No 206
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.84 E-value=1.2e-06 Score=79.49 Aligned_cols=185 Identities=14% Similarity=0.113 Sum_probs=117.0
Q ss_pred ceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecC-CCe-EEEEe
Q 018242 37 ESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKT-NGD-LYIAD 114 (359)
Q Consensus 37 ~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~-~g~-l~v~~ 114 (359)
.++.+.+++..++++..++.|..||..+++... .+.........+.+.+. +++ ++.+.
T Consensus 158 ~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~--------------------~~~~h~~~v~~~~~~~~~~g~~l~sgs 217 (354)
T 2pbi_B 158 SACSFTNSDMQILTASGDGTCALWDVESGQLLQ--------------------SFHGHGADVLCLDLAPSETGNTFVSGG 217 (354)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEETTTCCEEE--------------------EEECCSSCEEEEEECCCSSCCEEEEEE
T ss_pred EEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEE--------------------EEcCCCCCeEEEEEEeCCCCCEEEEEe
Confidence 478899999878899999999999998764322 11222233456667653 344 55555
Q ss_pred CCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEE
Q 018242 115 AYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVT 194 (359)
Q Consensus 115 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 194 (359)
..+.|..+|..+++....... ....++.++++|+|+ ++++- +..+.|..||..++...
T Consensus 218 ~Dg~v~~wd~~~~~~~~~~~~----h~~~v~~v~~~p~~~-~l~s~-----------------s~D~~v~lwd~~~~~~~ 275 (354)
T 2pbi_B 218 CDKKAMVWDMRSGQCVQAFET----HESDVNSVRYYPSGD-AFASG-----------------SDDATCRLYDLRADREV 275 (354)
T ss_dssp TTSCEEEEETTTCCEEEEECC----CSSCEEEEEECTTSS-EEEEE-----------------ETTSCEEEEETTTTEEE
T ss_pred CCCeEEEEECCCCcEEEEecC----CCCCeEEEEEeCCCC-EEEEE-----------------eCCCeEEEEECCCCcEE
Confidence 555689999988765332221 123577899999999 55541 23567888998765443
Q ss_pred EEeCC---CCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecC
Q 018242 195 VLLGN---LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSR 266 (359)
Q Consensus 195 ~~~~~---~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~ 266 (359)
..... ......++++++++. +++...++.|..|++.... ....+....+....++++++|++.++....
T Consensus 276 ~~~~~~~~~~~~~~~~~s~~g~~-l~~g~~d~~i~vwd~~~~~--~~~~l~~h~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 276 AIYSKESIIFGASSVDFSLSGRL-LFAGYNDYTINVWDVLKGS--RVSILFGHENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp EEECCTTCCSCEEEEEECTTSSE-EEEEETTSCEEEEETTTCS--EEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred EEEcCCCcccceeEEEEeCCCCE-EEEEECCCcEEEEECCCCc--eEEEEECCCCcEEEEEECCCCCEEEEEcCC
Confidence 33221 123468899999985 4555577899999975432 122222222334568999999866655443
No 207
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.83 E-value=1.9e-07 Score=85.32 Aligned_cols=213 Identities=10% Similarity=-0.093 Sum_probs=122.0
Q ss_pred CCEEEEeeCC------CCCCceEEEccCCCeeEEecC--CCEEEE--EEcCCcceEEEeecCC-------CCC-CCCCCc
Q 018242 23 QGVVQYQIEG------AIGPESLAFDALGEGPYTGVS--DGRIIK--WHQDQRRWLHFARTSP-------NRD-GCEGAY 84 (359)
Q Consensus 23 ~~~~~~~~~~------~~~p~~i~~~~~G~~l~~~~~--~~~i~~--~d~~~~~~~~~~~~~~-------~~~-~~~~~~ 84 (359)
+...++.+++ ...|++++++|||+.+|++.. ...+.. +|+.+ ...+..... .+. ....+.
T Consensus 107 ~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v~~~~~~~p~g~~~~~~~~~d 184 (368)
T 1mda_H 107 LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSASCFHIHPGAAATHYLGSCP 184 (368)
T ss_dssp CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEECSSCCCCEEEETTEEECCCCT
T ss_pred CEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEECCCceEEccCCCeEEEEEcCC
Confidence 3344777662 257999999999998999875 356777 77755 333321100 000 000000
Q ss_pred cc--------------ccc----cccccCCcceEEEEecCCCeEEEEeCCCcEEEEeCCCCeEEEEeec-CCC----ccc
Q 018242 85 EY--------------DHA----AKEHICGRPLGLCFNKTNGDLYIADAYFGLLKVGPEGGLATAVATQ-SEG----IPF 141 (359)
Q Consensus 85 ~~--------------~~~----~~~~~~~~p~gi~~~~~~g~l~v~~~~~~i~~~~~~~~~~~~~~~~-~~~----~~~ 141 (359)
+. .+. ........|. + .++++.+|+.+. +.+..+|..++..+.+... ... ...
T Consensus 185 g~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~ 260 (368)
T 1mda_H 185 ASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADN 260 (368)
T ss_dssp TSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTT
T ss_pred CCEEEEECccccccCCeEEEEeeeeeeCCCCcc--c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccc
Confidence 00 000 0001112343 3 554677777766 7799999876543332210 000 011
Q ss_pred cccce---EEEeCCCCEEEEEeC---CCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEE
Q 018242 142 RFCNS---LDIDQSTGIIYFTDS---SSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYI 215 (359)
Q Consensus 142 ~~~~~---l~~d~~g~~l~v~d~---~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l 215 (359)
..|.+ ++++++|+++|++.. +.- ....+.+..+|..+++..........|.++++++|++.+
T Consensus 261 ~~p~g~~~v~~s~dg~~lyV~~~~~~~~~------------~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l 328 (368)
T 1mda_H 261 FRSAGFQMVAKLKNTDGIMILTVEHSRSC------------LAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASD 328 (368)
T ss_dssp EEECSSSCEEEETTTTEEEEEEEECSSCT------------TSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCE
T ss_pred cccCcceeeEEcCCCCEEEEEeccccCcc------------cccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEE
Confidence 12333 889999999999832 100 000124669999887665433333469999999999988
Q ss_pred EEEec-CCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCC
Q 018242 216 LLAET-TSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPR 256 (359)
Q Consensus 216 ~v~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~ 256 (359)
|+++. .++.|.++|+...+ .......+..|+++++.++
T Consensus 329 ~va~~~~~~~VsVID~~t~k---vv~~I~vg~~P~~i~~~~~ 367 (368)
T 1mda_H 329 NYANSAGTEVLDIYDAASDQ---DQSSVELDKGPESLSVQNE 367 (368)
T ss_dssp EEEEETTTTEEEEEESSSCE---EEEECCCCSCCCEEECCCC
T ss_pred EEEccCCCCeEEEEECCCCc---EEEEEECCCCCCEEEeecC
Confidence 99988 68999999975531 1112234567999988653
No 208
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.83 E-value=4.7e-07 Score=81.40 Aligned_cols=193 Identities=8% Similarity=0.029 Sum_probs=114.6
Q ss_pred CCCceEEEccC---CCeeEEecCCCEEEEEEcCCcc--eEEEeecCCCCCCCCCCcccccccccccCCcceEEE------
Q 018242 34 IGPESLAFDAL---GEGPYTGVSDGRIIKWHQDQRR--WLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLC------ 102 (359)
Q Consensus 34 ~~p~~i~~~~~---G~~l~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~------ 102 (359)
....++++.++ |++++++..++.|..||..+.+ ... +.........+.
T Consensus 66 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---------------------~~~~~~~v~~~~~~~~~~ 124 (357)
T 3i2n_A 66 KPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYS---------------------VKGHKEIINAIDGIGGLG 124 (357)
T ss_dssp SCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEE---------------------ECCCSSCEEEEEEESGGG
T ss_pred CcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEE---------------------EEecccceEEEeeccccc
Confidence 34568889998 6878889999999999988763 111 122223344553
Q ss_pred EecCCCeEEEEeCCCcEEEEeCCCCe--EEEEeecCCCccccccceEE----EeCCCCEEEEEeCCCccccccceeeeee
Q 018242 103 FNKTNGDLYIADAYFGLLKVGPEGGL--ATAVATQSEGIPFRFCNSLD----IDQSTGIIYFTDSSSQFQRRNHISVILS 176 (359)
Q Consensus 103 ~~~~~g~l~v~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~----~d~~g~~l~v~d~~~~~~~~~~~~~~~~ 176 (359)
+++++..++.+...+.|..+|..+++ ...+.. ..+.....+..++ ++++++.++.+
T Consensus 125 ~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~l~~~----------------- 186 (357)
T 3i2n_A 125 IGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEP-VQGENKRDCWTVAFGNAYNQEERVVCAG----------------- 186 (357)
T ss_dssp CC-CCCEEEEEETTSCEEEECTTSCSSCSEEECC-CTTSCCCCEEEEEEECCCC-CCCEEEEE-----------------
T ss_pred cCCCccEEEEEeCCCeEEEEeCCCCCCcceeccc-cCCCCCCceEEEEEEeccCCCCCEEEEE-----------------
Confidence 45634455555555568889988764 222211 1111122445565 67889844444
Q ss_pred cCCCceEEEEeCCCCcEEEEeCCCCCCceEEEcc---CCCEEEEEecCCCEEEEEEcCCCCCcc-eeE--eecCCCCCCc
Q 018242 177 GDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSE---DGNYILLAETTSCRILRYWLKTSKAGT-IEI--VAQLPGFPDN 250 (359)
Q Consensus 177 ~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~---d~~~l~v~~~~~~~i~~~~~~~~~~~~-~~~--~~~~~~~p~~ 250 (359)
...+.|..||..+++.............++++| +++.++. ...++.|..|++....... ... +.........
T Consensus 187 -~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~ 264 (357)
T 3i2n_A 187 -YDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVA-TSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQ 264 (357)
T ss_dssp -ETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEE-EESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEE
T ss_pred -ccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEE-ECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEE
Confidence 234689999998877655444445578899999 8875554 5677899999986432211 111 1122233456
Q ss_pred eEECCCCC-EEEEEecCC
Q 018242 251 IKRSPRGG-FWVGIHSRR 267 (359)
Q Consensus 251 i~~d~~G~-lwv~~~~~~ 267 (359)
+++.++|. +.++....+
T Consensus 265 ~~~~~~~~~~l~~~~~dg 282 (357)
T 3i2n_A 265 VRHLPQNRELFLTAGGAG 282 (357)
T ss_dssp EEEETTEEEEEEEEETTS
T ss_pred EEECCCCCcEEEEEeCCC
Confidence 88889887 555444433
No 209
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.83 E-value=9.4e-07 Score=79.63 Aligned_cols=191 Identities=12% Similarity=-0.068 Sum_probs=116.3
Q ss_pred CCceEEEccC----CCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCe-
Q 018242 35 GPESLAFDAL----GEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGD- 109 (359)
Q Consensus 35 ~p~~i~~~~~----G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~- 109 (359)
...++++.++ |++++++..++.|..||..+++... .+.........+++++.+++
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~--------------------~~~~~~~~i~~~~~~~~~~~~ 130 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIK--------------------HYVGHGNAINELKFHPRDPNL 130 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEE--------------------EEESCCSCEEEEEECSSCTTE
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEee--------------------eecCCCCcEEEEEECCCCCCE
Confidence 3568889988 6678889999999999988764322 12223345678999984444
Q ss_pred EEEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCC
Q 018242 110 LYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPA 189 (359)
Q Consensus 110 l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 189 (359)
++.+...+.|..+|..+++.......... ....+..++++++|++++.+ ...+.|..||..
T Consensus 131 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~------------------~~dg~i~i~d~~ 191 (366)
T 3k26_A 131 LLSVSKDHALRLWNIQTDTLVAIFGGVEG-HRDEVLSADYDLLGEKIMSC------------------GMDHSLKLWRIN 191 (366)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECSTTS-CSSCEEEEEECTTSSEEEEE------------------ETTSCEEEEESC
T ss_pred EEEEeCCCeEEEEEeecCeEEEEeccccc-ccCceeEEEECCCCCEEEEe------------------cCCCCEEEEECC
Confidence 55555555699999988765443211111 22467889999999944444 224568888876
Q ss_pred CCcEEEE-----------------------------eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCC-----
Q 018242 190 TKQVTVL-----------------------------LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKA----- 235 (359)
Q Consensus 190 ~~~~~~~-----------------------------~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~----- 235 (359)
+++.... .........++++ ++ ++++...++.|..|++.....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~~wd~~~~~~~~~~~ 268 (366)
T 3k26_A 192 SKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD-LILSKSCENAIVCWKPGKMEDDIDKI 268 (366)
T ss_dssp SHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT-EEEEECSSSEEEEEEESSTTCCGGGC
T ss_pred CCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CC-EEEEEecCCEEEEEeCCCcccccccc
Confidence 5432110 0022334677776 45 566667789999999864321
Q ss_pred ----cc---eeEeecCCCCCCceEECCC--CCEEEEEecCC
Q 018242 236 ----GT---IEIVAQLPGFPDNIKRSPR--GGFWVGIHSRR 267 (359)
Q Consensus 236 ----~~---~~~~~~~~~~p~~i~~d~~--G~lwv~~~~~~ 267 (359)
.. ...+.........++++++ |++.++....+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg 309 (366)
T 3k26_A 269 KPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVG 309 (366)
T ss_dssp CTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTS
T ss_pred ccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCC
Confidence 00 1111112223456777777 88766555444
No 210
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.82 E-value=9.9e-07 Score=88.85 Aligned_cols=207 Identities=9% Similarity=-0.065 Sum_probs=128.8
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
....+++++|+|+.+.++..++.|..||..+++... .+.........+++++++..+.++
T Consensus 56 ~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~--------------------~~~~~~~~v~~~~~s~~~~~l~~~ 115 (814)
T 3mkq_A 56 TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV--------------------DFEAHPDYIRSIAVHPTKPYVLSG 115 (814)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE--------------------EEECCSSCEEEEEECSSSSEEEEE
T ss_pred CcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE--------------------EEecCCCCEEEEEEeCCCCEEEEE
Confidence 345689999999988888899999999988764322 122233446789999954556666
Q ss_pred eCCCcEEEEeCCCC-eEEEEeecCCCccccccceEEEeC-CCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCC
Q 018242 114 DAYFGLLKVGPEGG-LATAVATQSEGIPFRFCNSLDIDQ-STGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATK 191 (359)
Q Consensus 114 ~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~d~-~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 191 (359)
...+.|..++.+++ ........ ....+..++++| +++.+.++ ...+.|..||..++
T Consensus 116 ~~dg~i~vw~~~~~~~~~~~~~~----~~~~v~~~~~~p~~~~~l~~~------------------~~dg~v~vwd~~~~ 173 (814)
T 3mkq_A 116 SDDLTVKLWNWENNWALEQTFEG----HEHFVMCVAFNPKDPSTFASG------------------CLDRTVKVWSLGQS 173 (814)
T ss_dssp ETTSEEEEEEGGGTSEEEEEEEC----CSSCEEEEEEETTEEEEEEEE------------------ETTSEEEEEETTCS
T ss_pred cCCCEEEEEECCCCceEEEEEcC----CCCcEEEEEEEcCCCCEEEEE------------------eCCCeEEEEECCCC
Confidence 65556888898766 33222221 113467889999 77734333 23467888987654
Q ss_pred cEEE-EeCC-CCCCceEEEcc--CCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCC
Q 018242 192 QVTV-LLGN-LSFPNGVALSE--DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 192 ~~~~-~~~~-~~~p~gia~~~--d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
.... +... ......++++| +++ .+++...++.|..|++.... ....+....+....+++.++|.+.++....+
T Consensus 174 ~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 250 (814)
T 3mkq_A 174 TPNFTLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDG 250 (814)
T ss_dssp SCSEEEECCCTTCCCEEEECCSTTCC-EEEEECTTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSEEEEEETTS
T ss_pred cceeEEecCCCCCEEEEEEEECCCCC-EEEEEeCCCEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC
Confidence 4332 2222 24567889988 887 45555677899999975432 1222222223345688899998666555444
Q ss_pred CccccccccCCc-cceeeecCCcc
Q 018242 268 KGISKLVLSFPW-IGNVLIKLPID 290 (359)
Q Consensus 268 ~~~~~~~~~~~~-~g~~~~~~~~~ 290 (359)
. +..++. .++....+..+
T Consensus 251 ~-----v~vwd~~~~~~~~~~~~~ 269 (814)
T 3mkq_A 251 T-----LKIWNSSTYKVEKTLNVG 269 (814)
T ss_dssp C-----EEEEETTTCSEEEEECCS
T ss_pred e-----EEEEECCCCcEEEEeecC
Confidence 3 444443 45555554443
No 211
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.81 E-value=1.9e-06 Score=80.77 Aligned_cols=163 Identities=13% Similarity=0.118 Sum_probs=96.4
Q ss_pred cceEEEEecCCCeEEEEe-CCCcEEEEeCC--CCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceee
Q 018242 97 RPLGLCFNKTNGDLYIAD-AYFGLLKVGPE--GGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISV 173 (359)
Q Consensus 97 ~p~gi~~~~~~g~l~v~~-~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~ 173 (359)
....+++++++..|+++. ..+.|..++.. +++......... ....+..++++|+|++|++++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~------------- 168 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFC--FSKRPNAISIAEDDTTVIIAD------------- 168 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEE--CSSCEEEEEECTTSSEEEEEE-------------
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeeccc--CCCCceEEEEcCCCCEEEEEe-------------
Confidence 357889999444444443 33457778876 554332221100 113567899999999566652
Q ss_pred eeecCCCceEEEEeCCCCcEE-----EEeCCCCCCceEEEccC---CCEEEEEecCCCEEEEEEcCCCCCcceeEee-cC
Q 018242 174 ILSGDKTGRLMKYDPATKQVT-----VLLGNLSFPNGVALSED---GNYILLAETTSCRILRYWLKTSKAGTIEIVA-QL 244 (359)
Q Consensus 174 ~~~~~~~g~v~~~d~~~~~~~-----~~~~~~~~p~gia~~~d---~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~ 244 (359)
..+.|+.++..++... .+.........++++|+ ++ ++++...++.|..|++..... ...+. ..
T Consensus 169 -----~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~~~~--~~~~~~~h 240 (450)
T 2vdu_B 169 -----KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQCFI--VDKWLFGH 240 (450)
T ss_dssp -----TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESCTTC--EEEECCCC
T ss_pred -----CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCCCce--eeeeecCC
Confidence 2467888887654432 12223345678999999 76 455556778999999865422 22222 22
Q ss_pred CCCCCceEECCCCCEEEEEecCCCccccccccCC-ccceeeecCC
Q 018242 245 PGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFP-WIGNVLIKLP 288 (359)
Q Consensus 245 ~~~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~-~~g~~~~~~~ 288 (359)
.+....+++. +|++.++....+. +.+++ ..++.+..+.
T Consensus 241 ~~~v~~~~~s-d~~~l~s~~~d~~-----v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 241 KHFVSSICCG-KDYLLLSAGGDDK-----IFAWDWKTGKNLSTFD 279 (450)
T ss_dssp SSCEEEEEEC-STTEEEEEESSSE-----EEEEETTTCCEEEEEE
T ss_pred CCceEEEEEC-CCCEEEEEeCCCe-----EEEEECCCCcEeeeec
Confidence 2345678998 8887765555443 55554 3555555443
No 212
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.81 E-value=1.3e-05 Score=79.56 Aligned_cols=190 Identities=13% Similarity=0.113 Sum_probs=122.0
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA 115 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~ 115 (359)
-.+++++++|+++.++..++.|..||..++.... .+.........+++++++..+..+..
T Consensus 433 v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~--------------------~~~~h~~~v~~~~~s~~~~~l~s~s~ 492 (694)
T 3dm0_A 433 VEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTR--------------------RFVGHTKDVLSVAFSLDNRQIVSASR 492 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE--------------------EEECCSSCEEEEEECTTSSCEEEEET
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCCccee--------------------EEeCCCCCEEEEEEeCCCCEEEEEeC
Confidence 4578999999988889999999999998763221 12223344678999995555665665
Q ss_pred CCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCE-EEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEE
Q 018242 116 YFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGI-IYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVT 194 (359)
Q Consensus 116 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 194 (359)
.+.|..+|..+.....+..... .....+..+++++++.. +.++ ++..+.|..||..+++..
T Consensus 493 D~~i~iwd~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s-----------------~s~d~~v~vwd~~~~~~~ 554 (694)
T 3dm0_A 493 DRTIKLWNTLGECKYTISEGGE-GHRDWVSCVRFSPNTLQPTIVS-----------------ASWDKTVKVWNLSNCKLR 554 (694)
T ss_dssp TSCEEEECTTSCEEEEECSSTT-SCSSCEEEEEECSCSSSCEEEE-----------------EETTSCEEEEETTTCCEE
T ss_pred CCEEEEEECCCCcceeeccCCC-CCCCcEEEEEEeCCCCcceEEE-----------------EeCCCeEEEEECCCCcEE
Confidence 5568888887654333322111 12235678899988621 3444 123567888998876655
Q ss_pred EEe-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCC
Q 018242 195 VLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 195 ~~~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
... .+......++++|+++ ++++...++.|..||+...+. ... .........+++++++.+.++....+
T Consensus 555 ~~~~~h~~~v~~v~~spdg~-~l~sg~~Dg~i~iwd~~~~~~--~~~-~~~~~~v~~~~~sp~~~~l~~~~~~~ 624 (694)
T 3dm0_A 555 STLAGHTGYVSTVAVSPDGS-LCASGGKDGVVLLWDLAEGKK--LYS-LEANSVIHALCFSPNRYWLCAATEHG 624 (694)
T ss_dssp EEECCCSSCEEEEEECTTSS-EEEEEETTSBCEEEETTTTEE--EEC-CBCSSCEEEEEECSSSSEEEEEETTE
T ss_pred EEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCce--EEE-ecCCCcEEEEEEcCCCcEEEEEcCCC
Confidence 433 3344567899999998 566666788999999864311 111 11223346688999998777665443
No 213
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.80 E-value=2.2e-07 Score=87.42 Aligned_cols=166 Identities=14% Similarity=0.169 Sum_probs=100.0
Q ss_pred cCCcceEEEEecCCCeEEEEeCCC-cEEEEeCCCCeEEEEeecCCC----ccccccceEEEeCC---CCEEEEEeCCCcc
Q 018242 94 ICGRPLGLCFNKTNGDLYIADAYF-GLLKVGPEGGLATAVATQSEG----IPFRFCNSLDIDQS---TGIIYFTDSSSQF 165 (359)
Q Consensus 94 ~~~~p~gi~~~~~~g~l~v~~~~~-~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~d~~---g~~l~v~d~~~~~ 165 (359)
....|.+|++++ +|+|||++... .|++++..+++.+.+...... .....+.+|+++|+ +++||++.+....
T Consensus 25 ~l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~ 103 (454)
T 1cru_A 25 NLNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNP 103 (454)
T ss_dssp CCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECT
T ss_pred CCCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEecccc
Confidence 345799999999 89999998775 499998876666554331110 11345669999994 4449999542000
Q ss_pred ccccceeeeeecCCCceEEEEeCCCC--cE---EEEe-----CCCCCCceEEEccCCCEEEEEecC--------------
Q 018242 166 QRRNHISVILSGDKTGRLMKYDPATK--QV---TVLL-----GNLSFPNGVALSEDGNYILLAETT-------------- 221 (359)
Q Consensus 166 ~~~~~~~~~~~~~~~g~v~~~d~~~~--~~---~~~~-----~~~~~p~gia~~~d~~~l~v~~~~-------------- 221 (359)
..... .......|++++.+.+ .+ +.+. .....+.+|+|++||+ ||++.-.
T Consensus 104 ~~~~~-----~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~Gd~~~~~~~~~~~~~~ 177 (454)
T 1cru_A 104 KSTDK-----ELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIGDQGRNQLAYLFLPNQ 177 (454)
T ss_dssp TC--C-----CSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEECCTTTTSGGGTTSCCC
T ss_pred CCCcc-----ccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEECCCCCCCccccccccc
Confidence 00000 0000235777664321 21 2222 1234578999999997 8998432
Q ss_pred ------------------CCEEEEEEcCCCCCc--------ceeEeecCCCCCCceEECCCCCEEEEEecC
Q 018242 222 ------------------SCRILRYWLKTSKAG--------TIEIVAQLPGFPDNIKRSPRGGFWVGIHSR 266 (359)
Q Consensus 222 ------------------~~~i~~~~~~~~~~~--------~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~ 266 (359)
.+.|+|++.++.-.. ..+++..-.--|.++++|++|+||++..+.
T Consensus 178 ~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~L~~~d~g~ 248 (454)
T 1cru_A 178 AQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGKLLQSEQGP 248 (454)
T ss_dssp TTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSCEEEEEECS
T ss_pred cccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCCEEEEecCC
Confidence 367999987542100 123343311237889999999999999763
No 214
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.80 E-value=1.6e-05 Score=71.27 Aligned_cols=191 Identities=9% Similarity=-0.058 Sum_probs=106.9
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccc-cc-cCCcceEEEEecCCCeEE-
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAK-EH-ICGRPLGLCFNKTNGDLY- 111 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~p~gi~~~~~~g~l~- 111 (359)
.-.+++++++ ++.++..++.|..||..++...... .+ .. .......++++| +++++
T Consensus 16 ~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~------------------~~~~~~h~~~v~~v~~sp-~~~~la 74 (330)
T 2hes_X 16 KIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLID------------------VLDETAHKKAIRSVAWRP-HTSLLA 74 (330)
T ss_dssp CEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEE------------------EECTTCCCSCEEEEEECT-TSSEEE
T ss_pred ceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEE------------------EEecCCccCCEEEEEECC-CCCEEE
Confidence 3457778776 5888899999999998765332221 11 11 223467899999 55544
Q ss_pred EEeCCCcEEEEeCCCCe-----EEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEE
Q 018242 112 IADAYFGLLKVGPEGGL-----ATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKY 186 (359)
Q Consensus 112 v~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 186 (359)
.+...+.|..++.+... .+.+.. ..+ ....+..++++|+|+ ..++- +..+.|..|
T Consensus 75 s~s~D~~v~iw~~~~~~~~~~~~~~~~~-~~~-h~~~V~~v~~sp~g~-~las~-----------------s~D~~v~iw 134 (330)
T 2hes_X 75 AGSFDSTVSIWAKEESADRTFEMDLLAI-IEG-HENEVKGVAWSNDGY-YLATC-----------------SRDKSVWIW 134 (330)
T ss_dssp EEETTSCEEEEEC-------CCCEEEEE-EC-----CEEEEEECTTSC-EEEEE-----------------ETTSCEEEE
T ss_pred EEeCCCcEEEEEcccCcCccccceeEEE-EcC-CCCcEEEEEECCCCC-EEEEE-----------------eCCCEEEEE
Confidence 44544557778774321 111111 111 123577899999999 44441 234578888
Q ss_pred eCCC-C---cE-EEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCC--CCE
Q 018242 187 DPAT-K---QV-TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPR--GGF 259 (359)
Q Consensus 187 d~~~-~---~~-~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~--G~l 259 (359)
|... + +. ..+.........++++|+++ ++++...++.|..|+...........+....+....++++++ +.+
T Consensus 135 d~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 213 (330)
T 2hes_X 135 ETDESGEEYECISVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFR 213 (330)
T ss_dssp ECCTTCCCCEEEEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCE
T ss_pred eccCCCCCeEEEEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeE
Confidence 8732 2 12 22333444567899999988 566667788999998653311111122212223345778776 554
Q ss_pred EEEEecCC
Q 018242 260 WVGIHSRR 267 (359)
Q Consensus 260 wv~~~~~~ 267 (359)
.++....+
T Consensus 214 l~s~s~D~ 221 (330)
T 2hes_X 214 LCSGSDDS 221 (330)
T ss_dssp EEEEETTS
T ss_pred EEEEeCCC
Confidence 44443333
No 215
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.79 E-value=3.4e-07 Score=96.85 Aligned_cols=200 Identities=10% Similarity=-0.022 Sum_probs=129.4
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEe
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIAD 114 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~ 114 (359)
...+++++++|+.+.++..+|.|..|+..+++... ...........+++++++..+..+.
T Consensus 963 ~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~--------------------~~~~h~~~v~~l~~s~dg~~l~s~~ 1022 (1249)
T 3sfz_A 963 QVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFS--------------------SGVGHKKAVRHIQFTADGKTLISSS 1022 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEE--------------------ECCCCSSCCCCEEECSSSSCEEEEC
T ss_pred cEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceee--------------------ecccCCCceEEEEECCCCCEEEEEc
Confidence 45688999999988899999999999988764322 1122233456899999444455555
Q ss_pred CCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEE
Q 018242 115 AYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVT 194 (359)
Q Consensus 115 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 194 (359)
..+.|..++..+++...... ....+..+.+.+++. +..+ +..+.|..||..+++..
T Consensus 1023 ~dg~i~vwd~~~~~~~~~~~-----~~~~v~~~~~~~~~~-l~~~------------------~~dg~v~vwd~~~~~~~ 1078 (1249)
T 3sfz_A 1023 EDSVIQVWNWQTGDYVFLQA-----HQETVKDFRLLQDSR-LLSW------------------SFDGTVKVWNVITGRIE 1078 (1249)
T ss_dssp SSSBEEEEETTTTEEECCBC-----CSSCEEEEEECSSSE-EEEE------------------ESSSEEEEEETTTTCCC
T ss_pred CCCEEEEEECCCCceEEEec-----CCCcEEEEEEcCCCc-EEEE------------------ECCCcEEEEECCCCcee
Confidence 44568899998887543211 123566788999887 6555 23567999998876544
Q ss_pred E-EeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCCCccccc
Q 018242 195 V-LLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKL 273 (359)
Q Consensus 195 ~-~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~~~~~~ 273 (359)
. +.........++++||++. +++...++.|..|++..... ...+....+....++++++|++.++....+.
T Consensus 1079 ~~~~~~~~~v~~~~~s~d~~~-l~s~s~d~~v~iwd~~~~~~--~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~----- 1150 (1249)
T 3sfz_A 1079 RDFTCHQGTVLSCAISSDATK-FSSTSADKTAKIWSFDLLSP--LHELKGHNGCVRCSAFSLDGILLATGDDNGE----- 1150 (1249)
T ss_dssp EEEECCSSCCCCEEECSSSSS-CEEECCSSCCCEECSSSSSC--SBCCCCCSSCEEEEEECSSSSEEEEEETTSC-----
T ss_pred EEEcccCCcEEEEEECCCCCE-EEEEcCCCcEEEEECCCcce--eeeeccCCCcEEEEEECCCCCEEEEEeCCCE-----
Confidence 3 3334455688999999985 45556778899998764321 1111112223456899999987776655554
Q ss_pred cccCC-ccceeeec
Q 018242 274 VLSFP-WIGNVLIK 286 (359)
Q Consensus 274 ~~~~~-~~g~~~~~ 286 (359)
+..++ ..++.+..
T Consensus 1151 i~vwd~~~~~~~~~ 1164 (1249)
T 3sfz_A 1151 IRIWNVSDGQLLHS 1164 (1249)
T ss_dssp CCEEESSSSCCCCC
T ss_pred EEEEECCCCceEEE
Confidence 45554 34555444
No 216
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.79 E-value=1.2e-05 Score=75.25 Aligned_cols=205 Identities=13% Similarity=0.077 Sum_probs=120.5
Q ss_pred ccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCCCcEEE
Q 018242 42 DALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYFGLLK 121 (359)
Q Consensus 42 ~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~~~i~~ 121 (359)
..++++++++..++.|..||..+++... .+.........+++++ ++.++.+...+.|..
T Consensus 129 ~~~~~~l~sgs~dg~i~vwd~~~~~~~~--------------------~~~~h~~~V~~l~~~~-~~~l~s~s~dg~i~v 187 (464)
T 3v7d_B 129 QFEDNYVITGADDKMIRVYDSINKKFLL--------------------QLSGHDGGVWALKYAH-GGILVSGSTDRTVRV 187 (464)
T ss_dssp EEETTEEEEEETTSCEEEEETTTTEEEE--------------------EECCCSSCEEEEEECS-TTEEEEEETTSCEEE
T ss_pred EECCCEEEEEcCCCcEEEEECCCCcEEE--------------------EEeCCCcCEEEEEEcC-CCEEEEEeCCCCEEE
Confidence 3356668889999999999988764322 2222334567888887 666666666667999
Q ss_pred EeCCCCeEEEEeecCCCccccccceEEEe--CCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEE-----
Q 018242 122 VGPEGGLATAVATQSEGIPFRFCNSLDID--QSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVT----- 194 (359)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~d--~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~----- 194 (359)
+|.++++....... ....+..+.+. ++++++..+ +..+.|..+|..++...
T Consensus 188 wd~~~~~~~~~~~~----h~~~v~~l~~~~~~~~~~l~s~------------------s~d~~i~vwd~~~~~~~~~~~~ 245 (464)
T 3v7d_B 188 WDIKKGCCTHVFEG----HNSTVRCLDIVEYKNIKYIVTG------------------SRDNTLHVWKLPKESSVPDHGE 245 (464)
T ss_dssp EETTTTEEEEEECC----CSSCEEEEEEEESSSCEEEEEE------------------ETTSCEEEEECCCCCCC-----
T ss_pred EECCCCcEEEEECC----CCCccEEEEEecCCCCCEEEEE------------------cCCCcEEEeeCCCCcccccccc
Confidence 99998875433221 12245566666 566633333 22456777776654311
Q ss_pred -------------------EEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECC
Q 018242 195 -------------------VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSP 255 (359)
Q Consensus 195 -------------------~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~ 255 (359)
.... ....-.+++++++. +++...++.|..||+...+ ....+.........+++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~-l~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~ 320 (464)
T 3v7d_B 246 EHDYPLVFHTPEENPYFVGVLRG--HMASVRTVSGHGNI-VVSGSYDNTLIVWDVAQMK--CLYILSGHTDRIYSTIYDH 320 (464)
T ss_dssp -CCSSEEESCGGGCTTEEEEECC--CSSCEEEEEEETTE-EEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEEET
T ss_pred cCCcceEeeccCCCeEEEEEccC--ccceEEEEcCCCCE-EEEEeCCCeEEEEECCCCc--EEEEecCCCCCEEEEEEcC
Confidence 1111 11223455677775 4555567899999975431 1122222223345688899
Q ss_pred CCCEEEEEecCCCccccccccCCc-cceeeecCCccceeeeeecc
Q 018242 256 RGGFWVGIHSRRKGISKLVLSFPW-IGNVLIKLPIDIVKIHSSLV 299 (359)
Q Consensus 256 ~G~lwv~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 299 (359)
+|+..++....+. +..++. .++.+..+..+...+..+.+
T Consensus 321 ~~~~l~sg~~dg~-----i~vwd~~~~~~~~~~~~h~~~v~~~~~ 360 (464)
T 3v7d_B 321 ERKRCISASMDTT-----IRIWDLENGELMYTLQGHTALVGLLRL 360 (464)
T ss_dssp TTTEEEEEETTSC-----EEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CCCEEEEEeCCCc-----EEEEECCCCcEEEEEeCCCCcEEEEEE
Confidence 9987665555554 566653 67777666554444444443
No 217
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.79 E-value=1.1e-06 Score=87.44 Aligned_cols=207 Identities=7% Similarity=-0.088 Sum_probs=113.3
Q ss_pred CCceEEEccCCCeeEEecCC---------CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEec
Q 018242 35 GPESLAFDALGEGPYTGVSD---------GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNK 105 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~---------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~ 105 (359)
...+++++|||+.+..+..+ +.|+.||..+++.+.+. ........+..++++|
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~------------------~~~~~~~~~~~~~~SP 123 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLD------------------PPEVSNAKLQYAGWGP 123 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECC------------------CTTCCSCCCSBCCBCS
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEecc------------------CCccccccccccEECC
Confidence 37899999999966665442 78899999887543321 0011111245677888
Q ss_pred CCCeEEEEeCCCcEEEEeCCCCeEEEEeecCCCcc--------------ccccceEEEeCCCCEEEEEeCCCc----ccc
Q 018242 106 TNGDLYIADAYFGLLKVGPEGGLATAVATQSEGIP--------------FRFCNSLDIDQSTGIIYFTDSSSQ----FQR 167 (359)
Q Consensus 106 ~~g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~l~~d~~g~~l~v~d~~~~----~~~ 167 (359)
++..|..+. .+.|+.++..+++...+........ +.....++++|||++|.++..... |..
T Consensus 124 dG~~la~~~-~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~ 202 (723)
T 1xfd_A 124 KGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMEL 202 (723)
T ss_dssp STTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEE
T ss_pred CCCEEEEEE-CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEe
Confidence 444555554 3579999998877655432111000 112367999999997766532100 000
Q ss_pred c-------cceeee-----eecCCCceEEEEeCCCCcE-EEEeCC------CCCCceEEEccCCCEEEEEecC---CCEE
Q 018242 168 R-------NHISVI-----LSGDKTGRLMKYDPATKQV-TVLLGN------LSFPNGVALSEDGNYILLAETT---SCRI 225 (359)
Q Consensus 168 ~-------~~~~~~-----~~~~~~g~v~~~d~~~~~~-~~~~~~------~~~p~gia~~~d~~~l~v~~~~---~~~i 225 (359)
. .....+ ........|+.+|..+++. ..+... ......++++|||+.++..... ...|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i 282 (723)
T 1xfd_A 203 PTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSIL 282 (723)
T ss_dssp CCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEE
T ss_pred eccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEE
Confidence 0 000000 0001123688999887764 333221 1123468999999866444322 2578
Q ss_pred EEEEcCCCCCcceeEeec-CCCC----CCceEECCCCC-EEEE
Q 018242 226 LRYWLKTSKAGTIEIVAQ-LPGF----PDNIKRSPRGG-FWVG 262 (359)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~-~~~~----p~~i~~d~~G~-lwv~ 262 (359)
+.|++...+. ...+.. ..+. +..++++++|+ |+++
T Consensus 283 ~~~d~~~g~~--~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 283 TLCDATTGVC--TKKHEDESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp EEEETTTCCE--EEEEEEECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred EEEeCCCCcc--eEEEEeccCCEEeccCCCceEcCCCCeEEEE
Confidence 8888765432 122211 1121 24789999997 5554
No 218
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.78 E-value=3.6e-06 Score=74.82 Aligned_cols=196 Identities=11% Similarity=-0.008 Sum_probs=111.2
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcc--eEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecC--CCe
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRR--WLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKT--NGD 109 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~--~g~ 109 (359)
..-.+++++++|++++++..++.|..||..+.. ++... .+.........+++.+. +..
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~------------------~~~~~~~~v~~~~~~~~~d~~~ 73 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSD------------------SWRAHDSSIVAIDWASPEYGRI 73 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEE------------------EEECCSSCEEEEEECCGGGCSE
T ss_pred cceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecc------------------eeccCCCcEEEEEEcCCCCCCE
Confidence 456789999999988889999999999987642 11111 12223344678889874 344
Q ss_pred EEEEeCCCcEEEEeCCCCeE-------EEEeecCCCccccccceEEEeCC--CCEEEEEeCCCccccccceeeeeecCCC
Q 018242 110 LYIADAYFGLLKVGPEGGLA-------TAVATQSEGIPFRFCNSLDIDQS--TGIIYFTDSSSQFQRRNHISVILSGDKT 180 (359)
Q Consensus 110 l~v~~~~~~i~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~d~~--g~~l~v~d~~~~~~~~~~~~~~~~~~~~ 180 (359)
|+.+...+.|..++.++++. +.+.. ... ....+..++++++ ++++..+ ...
T Consensus 74 l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~-~~~-~~~~v~~~~~~~~~~~~~l~~~------------------~~d 133 (351)
T 3f3f_A 74 IASASYDKTVKLWEEDPDQEECSGRRWNKLCT-LND-SKGSLYSVKFAPAHLGLKLACL------------------GND 133 (351)
T ss_dssp EEEEETTSCEEEEEECTTSCTTSSCSEEEEEE-ECC-CSSCEEEEEECCGGGCSEEEEE------------------ETT
T ss_pred EEEEcCCCeEEEEecCCCcccccccCcceeee-ecc-cCCceeEEEEcCCCCCcEEEEe------------------cCC
Confidence 55555555588888876531 11111 111 1235678999999 8844444 234
Q ss_pred ceEEEEeCCCCcEEE-------Ee-------CCCCCCceEEEccC---CCEEEEEecCCCEEEEEEcCCCCCcceeEeec
Q 018242 181 GRLMKYDPATKQVTV-------LL-------GNLSFPNGVALSED---GNYILLAETTSCRILRYWLKTSKAGTIEIVAQ 243 (359)
Q Consensus 181 g~v~~~d~~~~~~~~-------~~-------~~~~~p~gia~~~d---~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~ 243 (359)
+.|..||..+++... .. ........++++|+ ++.++ +...++.+..++...........+..
T Consensus 134 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (351)
T 3f3f_A 134 GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLA-VSALEQAIIYQRGKDGKLHVAAKLPG 212 (351)
T ss_dssp CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEE-EEETTEEEEEEECTTSCEEEEEECCC
T ss_pred CcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEE-EecCCCcEEEEccCCCceeeeeecCC
Confidence 678888876543210 00 11233467888886 66444 44555666555433321111111111
Q ss_pred CCCCCCceEECCCC----CEEEEEecCCC
Q 018242 244 LPGFPDNIKRSPRG----GFWVGIHSRRK 268 (359)
Q Consensus 244 ~~~~p~~i~~d~~G----~lwv~~~~~~~ 268 (359)
.......+++.++| ++.++....+.
T Consensus 213 h~~~i~~~~~~p~~~~~~~~l~s~~~dg~ 241 (351)
T 3f3f_A 213 HKSLIRSISWAPSIGRWYQLIATGCKDGR 241 (351)
T ss_dssp CCSCEEEEEECCCSSCSSEEEEEEETTSC
T ss_pred CCcceeEEEECCCCCCcceEEEEEcCCCe
Confidence 22334568899987 56665554443
No 219
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.77 E-value=1.3e-06 Score=87.69 Aligned_cols=195 Identities=10% Similarity=0.078 Sum_probs=119.1
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCC-Ce-EEE
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTN-GD-LYI 112 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~-g~-l~v 112 (359)
.-.+++++++|+.++++..++.|..||..+....... .+.........++++++. ++ ++.
T Consensus 11 ~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~------------------~l~~h~~~V~~l~~s~~~~~~~l~s 72 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLID------------------TLTGHEGPVWRVDWAHPKFGTILAS 72 (753)
T ss_dssp CEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEE------------------EECCCSSCEEEEEECCTTSCSEEEE
T ss_pred eeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccce------------------eccCCcCceEEEEecCCCCCCEEEE
Confidence 4568889999998888889999999998754333221 222233446788898741 44 445
Q ss_pred EeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCC--CCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCC
Q 018242 113 ADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQS--TGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPAT 190 (359)
Q Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~--g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 190 (359)
+...+.|..++..+++......... ....+..++++|+ |+.++++ +..+.|..||..+
T Consensus 73 ~s~Dg~I~vwd~~~~~~~~~~~~~~--h~~~V~~v~~sp~~~~~~l~sg------------------s~dg~I~vwdl~~ 132 (753)
T 3jro_A 73 CSYDGKVLIWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPLLLVA------------------SSDGKVSVVEFKE 132 (753)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEEE------------------ETTSEEEEEECCS
T ss_pred EeCCCeEEEEECCCCcccccccccC--CCCCeEEEEECCCCCCCEEEEE------------------eCCCcEEEEEeec
Confidence 5545558888988876433222111 1235778999999 8834444 2356788888765
Q ss_pred Cc---EEEEeCCCCCCceEEEcc-------------CCCEEEEEecCCCEEEEEEcCCCCCc-ce-eEeecCCCCCCceE
Q 018242 191 KQ---VTVLLGNLSFPNGVALSE-------------DGNYILLAETTSCRILRYWLKTSKAG-TI-EIVAQLPGFPDNIK 252 (359)
Q Consensus 191 ~~---~~~~~~~~~~p~gia~~~-------------d~~~l~v~~~~~~~i~~~~~~~~~~~-~~-~~~~~~~~~p~~i~ 252 (359)
+. .............++++| +++ ++++...++.|..|++...... .. ..+....+....++
T Consensus 133 ~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~ 211 (753)
T 3jro_A 133 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 211 (753)
T ss_dssp SSCCCCEEEECCSSCEEEEEECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE
T ss_pred CCCcceeEeecCCCceEEEEecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEE
Confidence 52 222333344567888888 466 4555667789999998654221 11 11111223345688
Q ss_pred ECCC---CCEEEEEecCCC
Q 018242 253 RSPR---GGFWVGIHSRRK 268 (359)
Q Consensus 253 ~d~~---G~lwv~~~~~~~ 268 (359)
+.++ |++.++....+.
T Consensus 212 ~sp~~~~~~~l~s~s~Dg~ 230 (753)
T 3jro_A 212 WSPTVLLRSYLASVSQDRT 230 (753)
T ss_dssp ECCCCSSSEEEEEEESSSC
T ss_pred eccCCCCCCEEEEEecCCE
Confidence 8998 776665555443
No 220
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.76 E-value=2.2e-06 Score=78.44 Aligned_cols=190 Identities=13% Similarity=0.066 Sum_probs=117.3
Q ss_pred CCceEEEccC----C---CeeEEecCCCEEEEEEcCCcc------eEEEeecCCCCCCCCCCccccccccccc-----CC
Q 018242 35 GPESLAFDAL----G---EGPYTGVSDGRIIKWHQDQRR------WLHFARTSPNRDGCEGAYEYDHAAKEHI-----CG 96 (359)
Q Consensus 35 ~p~~i~~~~~----G---~~l~~~~~~~~i~~~d~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 96 (359)
...++++.++ | ++++++..++.|..||..+++ ...+ ... ..
T Consensus 64 ~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~ 122 (397)
T 1sq9_A 64 GLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKL---------------------DLLDSDMKKH 122 (397)
T ss_dssp CEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEE---------------------CCSCTTGGGS
T ss_pred cEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceee---------------------cccccccCCC
Confidence 4468899999 8 878888889999999987654 2222 111 24
Q ss_pred cceEEEEe----cCCCe-EEEEeCCCcEEEEeCCC------Ce-EE-----EEee--cCCCccccccceEEEeCCCCEEE
Q 018242 97 RPLGLCFN----KTNGD-LYIADAYFGLLKVGPEG------GL-AT-----AVAT--QSEGIPFRFCNSLDIDQSTGIIY 157 (359)
Q Consensus 97 ~p~gi~~~----~~~g~-l~v~~~~~~i~~~~~~~------~~-~~-----~~~~--~~~~~~~~~~~~l~~d~~g~~l~ 157 (359)
....++++ +++.. ++++...+.|..++..+ ++ .. .+.. .........+..++++++| .+.
T Consensus 123 ~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~ 201 (397)
T 1sq9_A 123 SFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIA 201 (397)
T ss_dssp CEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEE
T ss_pred cEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEE
Confidence 46789999 84455 55555555688887765 22 11 1110 0001123457789999999 566
Q ss_pred EEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCC-------CCCCceEEEccCCCEEEEEecCC---CEEEE
Q 018242 158 FTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGN-------LSFPNGVALSEDGNYILLAETTS---CRILR 227 (359)
Q Consensus 158 v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-------~~~p~gia~~~d~~~l~v~~~~~---~~i~~ 227 (359)
++ ...+.|..||..+++....... ......++++|+++.++.+ ..+ +.|..
T Consensus 202 ~~------------------~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~-~~d~~~g~i~i 262 (397)
T 1sq9_A 202 TG------------------FNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIA-HDSNSFGCITL 262 (397)
T ss_dssp EE------------------CTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEE-EEETTEEEEEE
T ss_pred EE------------------eCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEE-ecCCCCceEEE
Confidence 66 3356799999887655443332 4556789999999865554 455 78999
Q ss_pred EEcCCCCCcceeEeec-------------CCCCCCceEECCCCCEEEEEecCC
Q 018242 228 YWLKTSKAGTIEIVAQ-------------LPGFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 228 ~~~~~~~~~~~~~~~~-------------~~~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
|++...+ ....+.. .......++++++|++.++....+
T Consensus 263 ~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 313 (397)
T 1sq9_A 263 YETEFGE--RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG 313 (397)
T ss_dssp EETTTCC--EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS
T ss_pred EECCCCc--ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC
Confidence 9986432 1222221 122235588899998766555444
No 221
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.76 E-value=1.4e-05 Score=71.13 Aligned_cols=194 Identities=10% Similarity=0.011 Sum_probs=113.7
Q ss_pred CCceEEEccC-CCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCe-EEE
Q 018242 35 GPESLAFDAL-GEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGD-LYI 112 (359)
Q Consensus 35 ~p~~i~~~~~-G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~-l~v 112 (359)
.-.+++++|+ +++++++..++.|..||..+.+..... ....+.........+++++ +++ ++.
T Consensus 40 ~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~---------------~~~~l~~h~~~V~~~~~s~-dg~~l~s 103 (340)
T 4aow_A 40 WVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGI---------------PQRALRGHSHFVSDVVISS-DGQFALS 103 (340)
T ss_dssp CEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEE---------------EEEEECCCSSCEEEEEECT-TSSEEEE
T ss_pred CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccce---------------eeEEEeCCCCCEEEEEECC-CCCEEEE
Confidence 4568999987 677788889999999998764211000 0001222234567899999 555 444
Q ss_pred EeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCc
Q 018242 113 ADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQ 192 (359)
Q Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 192 (359)
+...+.|..++............ .......+...++++ ..++- ...+.+..+|.....
T Consensus 104 ~~~d~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~l~s~-----------------s~d~~~~~~d~~~~~ 161 (340)
T 4aow_A 104 GSWDGTLRLWDLTTGTTTRRFVG----HTKDVLSVAFSSDNR-QIVSG-----------------SRDKTIKLWNTLGVC 161 (340)
T ss_dssp EETTSEEEEEETTTTEEEEEEEC----CSSCEEEEEECTTSS-CEEEE-----------------ETTSCEEEECTTSCE
T ss_pred EcccccceEEeecccceeeeecC----CCCceeEEEEeecCc-cceee-----------------cCCCeEEEEEeCCCc
Confidence 55444577788877665433221 112344567778888 44431 234567788876543
Q ss_pred EEEEeC--CCCCCceEEEccCCC-EEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCCC
Q 018242 193 VTVLLG--NLSFPNGVALSEDGN-YILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRK 268 (359)
Q Consensus 193 ~~~~~~--~~~~p~gia~~~d~~-~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~ 268 (359)
...... .......+++.+++. .++++...++.|..|++...+. ...+....+....++++++|++.++....+.
T Consensus 162 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~--~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~ 238 (340)
T 4aow_A 162 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL--KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQ 238 (340)
T ss_dssp EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEE--EEEECCCSSCEEEEEECTTSSEEEEEETTCE
T ss_pred eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCce--eeEecCCCCcEEEEEECCCCCEEEEEeCCCe
Confidence 333221 123345677776653 3667777788999999765321 1122222233456899999987776555443
No 222
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.76 E-value=2.9e-06 Score=76.37 Aligned_cols=249 Identities=11% Similarity=0.069 Sum_probs=130.0
Q ss_pred CCCCceEEEccC---CCeeEEecCCCEEEEEEcCC-cceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCC
Q 018242 33 AIGPESLAFDAL---GEGPYTGVSDGRIIKWHQDQ-RRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNG 108 (359)
Q Consensus 33 ~~~p~~i~~~~~---G~~l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g 108 (359)
-..-.+++++|+ |+.++++..++.|..||..+ +..... .+.........+++++++.
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~-------------------~~~~h~~~v~~~~~~~~~~ 99 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPK-------------------AQQMHTGPVLDVCWSDDGS 99 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEE-------------------EEEECSSCEEEEEECTTSS
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEE-------------------EeccccCCEEEEEECcCCC
Confidence 345569999999 68788899999999999986 322111 1222334567899999444
Q ss_pred eEEEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEE--eCCCCEEEEEeCCCc---ccccc--cee---------
Q 018242 109 DLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDI--DQSTGIIYFTDSSSQ---FQRRN--HIS--------- 172 (359)
Q Consensus 109 ~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--d~~g~~l~v~d~~~~---~~~~~--~~~--------- 172 (359)
.|+.+...+.|..++.++++...+... ...+..+.+ ++++++++.+..... |+... ...
T Consensus 100 ~l~s~~~dg~v~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 174 (368)
T 3mmy_A 100 KVFTASCDKTAKMWDLSSNQAIQIAQH-----DAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCY 174 (368)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEEC-----SSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEE
T ss_pred EEEEEcCCCcEEEEEcCCCCceeeccc-----cCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCce
Confidence 555566555688999998876554321 134667787 788873444322110 11000 000
Q ss_pred -------eeeecCCCceEEEEeCCCCcEEEEe--CCC-CCCceEEEccCCC---EEEEEecCCCEEEEEEcCCCCC-cce
Q 018242 173 -------VILSGDKTGRLMKYDPATKQVTVLL--GNL-SFPNGVALSEDGN---YILLAETTSCRILRYWLKTSKA-GTI 238 (359)
Q Consensus 173 -------~~~~~~~~g~v~~~d~~~~~~~~~~--~~~-~~p~gia~~~d~~---~l~v~~~~~~~i~~~~~~~~~~-~~~ 238 (359)
.+......+.+..++.......... ... .....+++.++.. ..+++...++.|..|++..... ...
T Consensus 175 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~ 254 (368)
T 3mmy_A 175 CADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDN 254 (368)
T ss_dssp EEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHS
T ss_pred EEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccc
Confidence 0001111223344444322211111 000 1112333333322 1256666778899998865421 111
Q ss_pred eEeecCCC------------CCCceEECCCCCEEEEEecCCCccccccccCCc-cceeeecCCccceeeeeecccccCcc
Q 018242 239 EIVAQLPG------------FPDNIKRSPRGGFWVGIHSRRKGISKLVLSFPW-IGNVLIKLPIDIVKIHSSLVKLSGNG 305 (359)
Q Consensus 239 ~~~~~~~~------------~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 305 (359)
..+..... ....++++++|++.++....+. +..++. .++.+..+......
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~-----i~iwd~~~~~~~~~~~~~~~~------------ 317 (368)
T 3mmy_A 255 FTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR-----FSFWDKDARTKLKTSEQLDQP------------ 317 (368)
T ss_dssp EEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSC-----EEEEETTTTEEEEECCCCSSC------------
T ss_pred eeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCe-----EEEEECCCCcEEEEecCCCCC------------
Confidence 11211110 2456889999975555544443 555553 56666655432221
Q ss_pred eEEEEECCCCCEEEEEE
Q 018242 306 GMAMRISEQGNVLEILE 322 (359)
Q Consensus 306 ~~~~~~~~~g~~~~~~~ 322 (359)
..-++++++|+.+..-.
T Consensus 318 v~~~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 318 ISACCFNHNGNIFAYAS 334 (368)
T ss_dssp EEEEEECTTSSCEEEEE
T ss_pred ceEEEECCCCCeEEEEe
Confidence 34566778877666543
No 223
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.76 E-value=5.6e-07 Score=84.01 Aligned_cols=197 Identities=11% Similarity=0.030 Sum_probs=125.7
Q ss_pred CCCceEEEccCCC-eeEEecCCCEEEEEEcCCcce--EEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeE
Q 018242 34 IGPESLAFDALGE-GPYTGVSDGRIIKWHQDQRRW--LHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDL 110 (359)
Q Consensus 34 ~~p~~i~~~~~G~-~l~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l 110 (359)
....++++++++. +++++..++.|..|+..+... ..+. ....+.........+++++.++.+
T Consensus 182 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~---------------~~~~~~~h~~~v~~v~~~p~~~~~ 246 (430)
T 2xyi_A 182 KEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVID---------------AKNIFTGHTAVVEDVAWHLLHESL 246 (430)
T ss_dssp SCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEE---------------CSEEECCCSSCEEEEEECSSCTTE
T ss_pred CCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceec---------------cceeecCCCCCEeeeEEeCCCCCE
Confidence 3567899999987 788899999999999876311 0000 000122223446789999866666
Q ss_pred EEEe-CCCcEEEEeCCCCe----EEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEE
Q 018242 111 YIAD-AYFGLLKVGPEGGL----ATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMK 185 (359)
Q Consensus 111 ~v~~-~~~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 185 (359)
+++. ..+.|..+|..++. ...+.. ....++.++++|++++++++- ...+.|..
T Consensus 247 l~s~~~dg~i~i~d~~~~~~~~~~~~~~~-----~~~~v~~i~~~p~~~~~l~tg-----------------~~dg~v~v 304 (430)
T 2xyi_A 247 FGSVADDQKLMIWDTRNNNTSKPSHTVDA-----HTAEVNCLSFNPYSEFILATG-----------------SADKTVAL 304 (430)
T ss_dssp EEEEETTSEEEEEETTCSCSSSCSEEEEC-----CSSCEEEEEECSSCTTEEEEE-----------------ETTSEEEE
T ss_pred EEEEeCCCeEEEEECCCCCCCcceeEeec-----CCCCeEEEEeCCCCCCEEEEE-----------------eCCCeEEE
Confidence 6654 44558889987652 112211 123578899999987566552 23567888
Q ss_pred EeCCCC--cEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcc---------eeEeec---CCCCCCce
Q 018242 186 YDPATK--QVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGT---------IEIVAQ---LPGFPDNI 251 (359)
Q Consensus 186 ~d~~~~--~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~---------~~~~~~---~~~~p~~i 251 (359)
||..+. .+..+.........++++|+++.++++...++.|..|++....... .+.+.. ....+..+
T Consensus 305 wd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 384 (430)
T 2xyi_A 305 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 384 (430)
T ss_dssp EETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEE
T ss_pred EeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEE
Confidence 987652 2334444445568899999998788888888999999986421100 011111 22346778
Q ss_pred EECCCCC-EEEEEecCC
Q 018242 252 KRSPRGG-FWVGIHSRR 267 (359)
Q Consensus 252 ~~d~~G~-lwv~~~~~~ 267 (359)
+++++|. +.++....+
T Consensus 385 ~~~p~~~~~l~s~s~dg 401 (430)
T 2xyi_A 385 SWNPNEPWIICSVSEDN 401 (430)
T ss_dssp EECSSSTTEEEEEETTS
T ss_pred EECCCCCCEEEEEECCC
Confidence 9999998 666665544
No 224
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.75 E-value=7.6e-08 Score=87.80 Aligned_cols=192 Identities=7% Similarity=-0.043 Sum_probs=109.8
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcc-eEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRR-WLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
...+++++++|++++++..++.|..||..+++ +.... .+.........+++++++..++.+
T Consensus 57 ~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~------------------~~~~~~~~v~~~~~~~~~~~l~~~ 118 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTL------------------VLLRLNRAATFVRWSPNEDKFAVG 118 (377)
T ss_dssp CEEEEEECTTTCCEEEEETTSSEEEC------CCCCEE------------------ECCCCSSCEEEEECCTTSSCCEEE
T ss_pred eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeee------------------EecccCCceEEEEECCCCCEEEEE
Confidence 34589999999988888889999999988763 11110 222233446788999955556666
Q ss_pred eCCCcEEEEeCCCCe----EEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCC
Q 018242 114 DAYFGLLKVGPEGGL----ATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPA 189 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 189 (359)
...+.|..++.++++ ...+.. .....+..++++|+|+++..+ ...+.|..||..
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~l~~~------------------~~d~~i~iwd~~ 176 (377)
T 3dwl_C 119 SGARVISVCYFEQENDWWVSKHLKR----PLRSTILSLDWHPNNVLLAAG------------------CADRKAYVLSAY 176 (377)
T ss_dssp ESSSCEEECCC-----CCCCEEECS----SCCSCEEEEEECTTSSEEEEE------------------ESSSCEEEEEEC
T ss_pred ecCCeEEEEEECCcccceeeeEeec----ccCCCeEEEEEcCCCCEEEEE------------------eCCCEEEEEEEE
Confidence 655568888887764 222211 112367789999999944433 224567777753
Q ss_pred CC------------------cEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcc--eeEeecCCCCCC
Q 018242 190 TK------------------QVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGT--IEIVAQLPGFPD 249 (359)
Q Consensus 190 ~~------------------~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~p~ 249 (359)
++ +.............++++|+++. +++...++.|..|++....... ...+........
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~ 255 (377)
T 3dwl_C 177 VRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNA-LAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLR 255 (377)
T ss_dssp CSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSC-EEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEE
T ss_pred ecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCE-EEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceE
Confidence 21 11111122334578999999985 4455577899999987553211 111222223345
Q ss_pred ceEECCCCCEEEEEecCC
Q 018242 250 NIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 250 ~i~~d~~G~lwv~~~~~~ 267 (359)
.+++.++|++.++...++
T Consensus 256 ~~~~s~~~~~l~~~~~~~ 273 (377)
T 3dwl_C 256 SLLWANESAIVAAGYNYS 273 (377)
T ss_dssp EEEEEETTEEEEEESSSS
T ss_pred EEEEcCCCCEEEEEcCCc
Confidence 688999998777665444
No 225
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.75 E-value=2.8e-06 Score=88.38 Aligned_cols=181 Identities=12% Similarity=0.000 Sum_probs=117.7
Q ss_pred CCceEEEc-cCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCC-cceEEEEecCCCeEEE
Q 018242 35 GPESLAFD-ALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICG-RPLGLCFNKTNGDLYI 112 (359)
Q Consensus 35 ~p~~i~~~-~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~gi~~~~~~g~l~v 112 (359)
...+++++ |||+.+.+.. ++.|+.++..+++...+ ..... ....++++ ++..+++
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~s-dg~~l~~ 353 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKV---------------------PEPLRIRYVRRGGD-TKVAFIH 353 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEEC---------------------SCCSCEEEEEECSS-SEEEEEE
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEc---------------------cCCCcceEEeeeEc-CCCeEEE
Confidence 46789999 9998555544 68899999887643322 11112 34566677 4556666
Q ss_pred EeCCCcEE-EEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCC
Q 018242 113 ADAYFGLL-KVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATK 191 (359)
Q Consensus 113 ~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 191 (359)
+.....++ .++..+++.+.+.. ....+..++++|||++|+++. ..+.|+.+|.+++
T Consensus 354 ~s~~~~l~~~~d~~~~~~~~l~~-----~~~~~~~~~~SpDG~~la~~~------------------~~~~v~~~d~~tg 410 (1045)
T 1k32_A 354 GTREGDFLGIYDYRTGKAEKFEE-----NLGNVFAMGVDRNGKFAVVAN------------------DRFEIMTVDLETG 410 (1045)
T ss_dssp EETTEEEEEEEETTTCCEEECCC-----CCCSEEEEEECTTSSEEEEEE------------------TTSEEEEEETTTC
T ss_pred EECCCceEEEEECCCCCceEecC-----CccceeeeEECCCCCEEEEEC------------------CCCeEEEEECCCC
Confidence 55544688 88988877654431 123567899999999666552 2357999999888
Q ss_pred cEEEEe-CCCCCCceEEEccCCCEEEEEecCC---------CEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCC-EE
Q 018242 192 QVTVLL-GNLSFPNGVALSEDGNYILLAETTS---------CRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FW 260 (359)
Q Consensus 192 ~~~~~~-~~~~~p~gia~~~d~~~l~v~~~~~---------~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lw 260 (359)
+...+. ........++++|||+++.++.... ..|+.|++++.+ ...+.........++++++|+ |+
T Consensus 411 ~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~---~~~l~~~~~~~~~~~~spdG~~l~ 487 (1045)
T 1k32_A 411 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK---IFAATTENSHDYAPAFDADSKNLY 487 (1045)
T ss_dssp CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE---EEECSCSSSBEEEEEECTTSCEEE
T ss_pred ceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc---EEEeeCCCcccCCceEcCCCCEEE
Confidence 877665 3333447899999999877765432 589999976532 222222222234578899997 66
Q ss_pred EEEe
Q 018242 261 VGIH 264 (359)
Q Consensus 261 v~~~ 264 (359)
+++.
T Consensus 488 ~~s~ 491 (1045)
T 1k32_A 488 YLSY 491 (1045)
T ss_dssp EEES
T ss_pred EEec
Confidence 5554
No 226
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.75 E-value=2.9e-06 Score=78.93 Aligned_cols=202 Identities=11% Similarity=0.082 Sum_probs=115.2
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccC------------CcceEEE
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHIC------------GRPLGLC 102 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~p~gi~ 102 (359)
.-.+++++++|+++.++..++.|..||..+.+...... ..+.. ....+.... .....++
T Consensus 30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~--------~~~~~-~~~~~~~h~~~~~~~~~~~~~~~V~~l~ 100 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHS--------RGEYN-VYSTFQSHEPEFDYLKSLEIEEKINKIR 100 (447)
T ss_dssp SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCC--------CCCEE-EEEEEECCCCEEEGGGTEEECCCCCEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCccc--------cccee-EecccccccccccccccccccCceEEEE
Confidence 44588999999988889999999999987653100000 00000 000111111 3367899
Q ss_pred EecCC--CeEEEEeCCCcEEEEeCCCCeEEEEe------------------------------------ecCCCcccccc
Q 018242 103 FNKTN--GDLYIADAYFGLLKVGPEGGLATAVA------------------------------------TQSEGIPFRFC 144 (359)
Q Consensus 103 ~~~~~--g~l~v~~~~~~i~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~ 144 (359)
+++++ ..++.+...+.|..++..++...... ..........+
T Consensus 101 ~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 180 (447)
T 3dw8_B 101 WLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHI 180 (447)
T ss_dssp ECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCC
T ss_pred EcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcce
Confidence 99844 34555555555777776653321000 00001122356
Q ss_pred ceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCC-CcEEEEe--------CCCCCCceEEEccCC-CE
Q 018242 145 NSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPAT-KQVTVLL--------GNLSFPNGVALSEDG-NY 214 (359)
Q Consensus 145 ~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~-~~~~~~~--------~~~~~p~gia~~~d~-~~ 214 (359)
..++++++|+ ++++- ..+.|..||..+ +...... ........++++|++ +
T Consensus 181 ~~~~~~~~~~-~l~s~------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~- 240 (447)
T 3dw8_B 181 NSISINSDYE-TYLSA------------------DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN- 240 (447)
T ss_dssp CEEEECTTSS-EEEEE------------------CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT-
T ss_pred EEEEEcCCCC-EEEEe------------------CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc-
Confidence 7899999999 55551 246788888873 2222211 222345789999998 6
Q ss_pred EEEEecCCCEEEEEEcCCCCCcc--eeEeecCCC------------CCCceEECCCCCEEEEEec
Q 018242 215 ILLAETTSCRILRYWLKTSKAGT--IEIVAQLPG------------FPDNIKRSPRGGFWVGIHS 265 (359)
Q Consensus 215 l~v~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~------------~p~~i~~d~~G~lwv~~~~ 265 (359)
++++...++.|..||+....... ...+..... ....++++++|++.++...
T Consensus 241 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 241 TFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY 305 (447)
T ss_dssp EEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred EEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence 56666778899999987543211 222322111 3456899999987776655
No 227
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.74 E-value=9.3e-06 Score=71.60 Aligned_cols=195 Identities=9% Similarity=0.039 Sum_probs=112.7
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecC-CCeEEEE
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKT-NGDLYIA 113 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~-~g~l~v~ 113 (359)
.-.+++++++|+++.++..++.|..||..+...+... .+.........+++.+. +++++++
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~------------------~l~gH~~~V~~v~~s~~~~g~~l~s 72 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLID------------------TLTGHEGPVWRVDWAHPKFGTILAS 72 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCE------------------EECCCSSCEEEEEECCGGGCSEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEE------------------EEccccCCeEEEEecCCCcCCEEEE
Confidence 3457899999998889999999999998653111100 22223344678888652 3555554
Q ss_pred -eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCC--CCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCC
Q 018242 114 -DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQS--TGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPAT 190 (359)
Q Consensus 114 -~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~--g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 190 (359)
...+.|..+|.++++...+... .. ....++.++++|+ |+ +.++- ...+.|..+|..+
T Consensus 73 ~s~D~~v~iWd~~~~~~~~~~~~-~~-h~~~v~~v~~~p~~~g~-~l~s~-----------------s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 73 CSYDGKVMIWKEENGRWSQIAVH-AV-HSASVNSVQWAPHEYGP-MLLVA-----------------SSDGKVSVVEFKE 132 (297)
T ss_dssp EETTTEEEEEEBSSSCBCCCEEE-CC-CSSCEEEEEECCGGGCS-EEEEE-----------------ETTSEEEEEEBCS
T ss_pred EcCCCEEEEEEcCCCceEEEEEe-ec-CCCceeEEEeCcCCCCc-EEEEE-----------------ECCCcEEEEEecC
Confidence 4444588889877642211110 10 1235678999987 77 44441 2345777787654
Q ss_pred Cc---EEEEeCCCCCCceEEEccCC------------CEEEEEecCCCEEEEEEcCCCCCcc--eeEeecCCCCCCceEE
Q 018242 191 KQ---VTVLLGNLSFPNGVALSEDG------------NYILLAETTSCRILRYWLKTSKAGT--IEIVAQLPGFPDNIKR 253 (359)
Q Consensus 191 ~~---~~~~~~~~~~p~gia~~~d~------------~~l~v~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~p~~i~~ 253 (359)
+. ...+.........++++|++ ..++++...++.|..|++....... ...+.........+++
T Consensus 133 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~ 212 (297)
T 2pm7_B 133 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (297)
T ss_dssp SSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred CCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEE
Confidence 32 22233333445678888863 1266777788899999986532110 1112112233466888
Q ss_pred CCCC---CEEEEEecCC
Q 018242 254 SPRG---GFWVGIHSRR 267 (359)
Q Consensus 254 d~~G---~lwv~~~~~~ 267 (359)
++++ ++.++....+
T Consensus 213 sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 213 SPTVLLRSYMASVSQDR 229 (297)
T ss_dssp CCCCSSSEEEEEEETTS
T ss_pred CCCCCCceEEEEEECCC
Confidence 8885 4555444444
No 228
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.74 E-value=1.5e-06 Score=78.71 Aligned_cols=192 Identities=11% Similarity=0.056 Sum_probs=115.9
Q ss_pred CCceEEEccC--CCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecC--CCeE
Q 018242 35 GPESLAFDAL--GEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKT--NGDL 110 (359)
Q Consensus 35 ~p~~i~~~~~--G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~--~g~l 110 (359)
.-.++++.++ +++++++..++.|..||..++++.... ...........++++++ +..+
T Consensus 57 ~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~------------------~~~~~~~~v~~~~~~~~~~~~~l 118 (379)
T 3jrp_A 57 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIA------------------VHAVHSASVNSVQWAPHEYGPLL 118 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEE------------------EECCCSSCEEEEEECCGGGCSEE
T ss_pred cEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEee------------------eecCCCcceEEEEeCCCCCCCEE
Confidence 3457888876 888888999999999999887533322 12222344678999985 3445
Q ss_pred EEEeCCCcEEEEeCCCCeE--EEEeecCCCccccccceEEEeC-------------CCCEEEEEeCCCccccccceeeee
Q 018242 111 YIADAYFGLLKVGPEGGLA--TAVATQSEGIPFRFCNSLDIDQ-------------STGIIYFTDSSSQFQRRNHISVIL 175 (359)
Q Consensus 111 ~v~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~d~-------------~g~~l~v~d~~~~~~~~~~~~~~~ 175 (359)
+++...+.|..++..++.. ...... ....+..++++| +++.+..+
T Consensus 119 ~~~~~d~~i~v~d~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------- 178 (379)
T 3jrp_A 119 LVASSDGKVSVVEFKENGTTSPIIIDA----HAIGVNSASWAPATIEEDGEHNGTKESRKFVTG---------------- 178 (379)
T ss_dssp EEEETTSEEEEEECCTTSCCCEEEEEC----CTTCEEEEEECCCC----------CTTCEEEEE----------------
T ss_pred EEecCCCcEEEEecCCCCceeeEEecC----CCCceEEEEEcCccccccccccCCCCCCEEEEE----------------
Confidence 5556555688888876632 111111 123467788888 67734333
Q ss_pred ecCCCceEEEEeCCCCcE--E---EEeCCCCCCceEEEccC---CCEEEEEecCCCEEEEEEcCCCCCcceeEeec---C
Q 018242 176 SGDKTGRLMKYDPATKQV--T---VLLGNLSFPNGVALSED---GNYILLAETTSCRILRYWLKTSKAGTIEIVAQ---L 244 (359)
Q Consensus 176 ~~~~~g~v~~~d~~~~~~--~---~~~~~~~~p~gia~~~d---~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~---~ 244 (359)
...+.|..||..++.. . .+.........++++|+ ++ ++++...++.|..|++............. .
T Consensus 179 --~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 255 (379)
T 3jrp_A 179 --GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKF 255 (379)
T ss_dssp --ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEETTSCEEEEEESSTTSCCEEEESSSSCC
T ss_pred --eCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCC-eEEEEeCCCEEEEEeCCCCCccceeeeeccccC
Confidence 2245677777654321 1 12223345678999999 55 56666677899999987543221222222 2
Q ss_pred CCCCCceEECCCCCEEEEEecCC
Q 018242 245 PGFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 245 ~~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
......++++++|++.++....+
T Consensus 256 ~~~v~~~~~s~~g~~l~~~~~dg 278 (379)
T 3jrp_A 256 PDVLWRASWSLSGNVLALSGGDN 278 (379)
T ss_dssp SSCEEEEEECSSSCCEEEEESSS
T ss_pred CCcEEEEEEcCCCCEEEEecCCC
Confidence 23345678999997555444444
No 229
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.73 E-value=4e-06 Score=74.44 Aligned_cols=178 Identities=8% Similarity=0.136 Sum_probs=110.6
Q ss_pred EEEecCCCeEEEEe---C-CCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeee
Q 018242 101 LCFNKTNGDLYIAD---A-YFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILS 176 (359)
Q Consensus 101 i~~~~~~g~l~v~~---~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~ 176 (359)
..+.++++.||.++ . ...|++++.++...+.+... . . ..++++|+.||+++.+
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~-~------~--~~~~~~g~~iy~t~~g-------------- 165 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNH-Y------L--FTCNTSDRYFYYNNPK-------------- 165 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESS-C------C--CCSEEETTEEEEECTT--------------
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCC-C------c--eEeeEECCEEEEEeCC--------------
Confidence 35566688999887 2 23599999998766655431 1 0 2346777779999542
Q ss_pred cCCCceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCC-CEEEEEEcCCCCCcceeEeecCCCCCCceEECC
Q 018242 177 GDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTS-CRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSP 255 (359)
Q Consensus 177 ~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~ 255 (359)
...|++++.+++..+.+..+ +..+++.|+++.|||++..+ ..|++.++++.. .+.+.. ... ..+++
T Consensus 166 ---~~~Iy~~~l~g~~~~~l~~~---~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~---~~~Lt~-~~~---~~~~~ 232 (302)
T 3s25_A 166 ---NGQLYRYDTASQSEALFYDC---NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPN---PVVLTE-ANI---EHYNV 232 (302)
T ss_dssp ---TCCEEEEETTTTEEEEEECS---CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCC---CEECSC-SCE---EEEEE
T ss_pred ---CceEEEEECCCCCEEEEeCC---CccceeeecCCEEEEEEcCCCcEEEEEECCCCC---eEEEeC-CCc---ceEEE
Confidence 34699999987766655432 33345678999999998654 589999887642 222222 111 23555
Q ss_pred CCC-EEEEEecCCCccccccccCCccceeeecCCccceeeeeecccccCcceEEEEECCCCCEEEEEEccCCceeeceEE
Q 018242 256 RGG-FWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISE 334 (359)
Q Consensus 256 ~G~-lwv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~ 334 (359)
+|. ||.+..... ..+.+.+.+|...+.+.... ...
T Consensus 233 ~g~~Iy~~~~~~~--------------------------------------~~i~~~~~DG~~r~~l~~~~------~~~ 268 (302)
T 3s25_A 233 YGSLIFYQRGGDN--------------------------------------PALCVVKNDGTGFKELAKGE------FCN 268 (302)
T ss_dssp ETTEEEEEECSSS--------------------------------------CEEEEEETTSCCCEEEEESC------EEE
T ss_pred CCCEEEEEECCCC--------------------------------------cEEEEEECCCCccEEeeCCc------cce
Confidence 553 555443211 24556666765444433211 224
Q ss_pred EEEeCCEEEEecCCCCeEEEEcCC
Q 018242 335 VEEKDGNLWIGSVNMPYAGLYNYS 358 (359)
Q Consensus 335 ~~~~~g~l~ig~~~~~~l~~~~~~ 358 (359)
+...++.||...+....|.+++++
T Consensus 269 i~i~~d~Iy~td~~~~~i~~~~~d 292 (302)
T 3s25_A 269 INVTSQYVYFTDFVSNKEYCTSTQ 292 (302)
T ss_dssp EEECSSEEEEEETTTCCEEEEESS
T ss_pred EEEeCCEEEEEECCCCeEEEEECC
Confidence 556788999999888888887764
No 230
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.72 E-value=9.5e-06 Score=79.83 Aligned_cols=155 Identities=13% Similarity=0.057 Sum_probs=91.2
Q ss_pred cCCCe-EEEEeC-CCcEEEEeCC--C-CeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCC
Q 018242 105 KTNGD-LYIADA-YFGLLKVGPE--G-GLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDK 179 (359)
Q Consensus 105 ~~~g~-l~v~~~-~~~i~~~~~~--~-~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~ 179 (359)
|+++. |+++.. ...|+.++.+ + ++.+.+..............++++|||++|+++.....-. .....
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~--------~~~~~ 159 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGE--------GPSDV 159 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSS--------STTCE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCC--------CCCCc
Confidence 75555 555543 3469999987 4 6554442211000123456789999999777663110000 00011
Q ss_pred CceEEEEeCCC------CcEEEEe-CCCCCCceEEEccCCCEEEEEecCC-------CEEEEEEcCC-CCCcceeEeec-
Q 018242 180 TGRLMKYDPAT------KQVTVLL-GNLSFPNGVALSEDGNYILLAETTS-------CRILRYWLKT-SKAGTIEIVAQ- 243 (359)
Q Consensus 180 ~g~v~~~d~~~------~~~~~~~-~~~~~p~gia~~~d~~~l~v~~~~~-------~~i~~~~~~~-~~~~~~~~~~~- 243 (359)
...|+++|.++ ++.+.+. .+......++++|||+.|+++.... ..|+.+++++ ........+..
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~ 239 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG 239 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC
Confidence 24699999987 6666654 4334456789999999887776443 5899999873 32222333322
Q ss_pred CCCCCCceEECCCCCEEEEEecCC
Q 018242 244 LPGFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 244 ~~~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
.......+++++||++++.+...+
T Consensus 240 ~~~~~~~~~~spdg~l~~~~~~~~ 263 (662)
T 3azo_A 240 PEEAIAQAEWAPDGSLIVATDRTG 263 (662)
T ss_dssp TTBCEEEEEECTTSCEEEEECTTS
T ss_pred CCceEcceEECCCCeEEEEECCCC
Confidence 233455688899999777665443
No 231
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.72 E-value=1.7e-06 Score=79.04 Aligned_cols=159 Identities=12% Similarity=0.042 Sum_probs=98.4
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE-E
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI-A 113 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v-~ 113 (359)
...+++++|||+++.++. ++.+.+|+..+++..... ...........++|++ ++..++ +
T Consensus 178 ~V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~------------------~~~~~~~~v~~v~fsp-dg~~l~~~ 237 (365)
T 4h5i_A 178 EVKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARK------------------TDFDKNWSLSKINFIA-DDTVLIAA 237 (365)
T ss_dssp CCCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEE------------------CCCCTTEEEEEEEEEE-TTEEEEEE
T ss_pred ceEEEEEccCCceEEecc-ceeEEEEEeccCcceeee------------------ecCCCCCCEEEEEEcC-CCCEEEEE
Confidence 467999999999555555 566788877665322111 1111122356889999 555554 4
Q ss_pred eCCC----cEEEEeCCCCeEEEEee-cCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeC
Q 018242 114 DAYF----GLLKVGPEGGLATAVAT-QSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDP 188 (359)
Q Consensus 114 ~~~~----~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 188 (359)
...+ .+..++........... ...+ ....+..++++|+|+ +.++ ++..+.|..||.
T Consensus 238 s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~V~~~~~Spdg~-~las-----------------gs~D~~V~iwd~ 298 (365)
T 4h5i_A 238 SLKKGKGIVLTKISIKSGNTSVLRSKQVTN-RFKGITSMDVDMKGE-LAVL-----------------ASNDNSIALVKL 298 (365)
T ss_dssp EESSSCCEEEEEEEEETTEEEEEEEEEEES-SCSCEEEEEECTTSC-EEEE-----------------EETTSCEEEEET
T ss_pred ecCCcceeEEeecccccceecceeeeeecC-CCCCeEeEEECCCCC-ceEE-----------------EcCCCEEEEEEC
Confidence 3222 24556665554322111 1111 123567899999999 4444 123567999999
Q ss_pred CCCcEEE-Ee-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC
Q 018242 189 ATKQVTV-LL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS 233 (359)
Q Consensus 189 ~~~~~~~-~~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~ 233 (359)
++++... +. .+......++|+||++ ++++.+.+++|.+|++..+
T Consensus 299 ~~~~~~~~~~~gH~~~V~~v~fSpdg~-~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 299 KDLSMSKIFKQAHSFAITEVTISPDST-YVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TTTEEEEEETTSSSSCEEEEEECTTSC-EEEEEETTSEEEEEECCTT
T ss_pred CCCcEEEEecCcccCCEEEEEECCCCC-EEEEEeCCCeEEEEEcCCC
Confidence 8876543 32 3345578999999998 5677788899999998543
No 232
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.71 E-value=1.3e-05 Score=76.60 Aligned_cols=212 Identities=10% Similarity=0.010 Sum_probs=119.3
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcc--------eEEEeecCCCCCC---CCCCcccccccccccCCcceEEEE
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRR--------WLHFARTSPNRDG---CEGAYEYDHAAKEHICGRPLGLCF 103 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~gi~~ 103 (359)
.-++++++|||+++.++..++.|. |++..+ +......|..... .....+...+...+ ......+++
T Consensus 17 ~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~-~~~V~~vaw 93 (588)
T 2j04_A 17 WKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQP-VCYPRVCKP 93 (588)
T ss_dssp SSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSC-SCCEEEEEE
T ss_pred cEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCC-CCcEEEEEE
Confidence 567999999999566666666665 655432 1122222222110 00001101111122 234678999
Q ss_pred ecCCCeEEEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceE
Q 018242 104 NKTNGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRL 183 (359)
Q Consensus 104 ~~~~g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 183 (359)
+|++..|.++...+.+..++.++ ....+. .....+....+.++++|||++|+++ +..|.|
T Consensus 94 SPdG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsg------------------s~DGtV 153 (588)
T 2j04_A 94 SPIDDWMAVLSNNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVG------------------NEDGEL 153 (588)
T ss_dssp CSSSSCEEEEETTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEE------------------ETTSEE
T ss_pred CCCCCEEEEEeCCCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEE------------------cCCCEE
Confidence 99555566666665688888554 222221 1111112357799999999966666 335788
Q ss_pred EEEeCCCCc--------EEEEeCC----CCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcc-eeEeec-CCCCCC
Q 018242 184 MKYDPATKQ--------VTVLLGN----LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGT-IEIVAQ-LPGFPD 249 (359)
Q Consensus 184 ~~~d~~~~~--------~~~~~~~----~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~-~~~~~~-~~~~p~ 249 (359)
..||..++. +..+..+ ......++++||| +++...++.+..|++++..... .+.+.. ......
T Consensus 154 kIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~ 230 (588)
T 2j04_A 154 QFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKIT 230 (588)
T ss_dssp EEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCC
T ss_pred EEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecccccCcEE
Confidence 889988774 2343222 2356799999998 4555668899999987654321 122322 123456
Q ss_pred ceEECCCCCEEEEEecCCCccccccccCCcc
Q 018242 250 NIKRSPRGGFWVGIHSRRKGISKLVLSFPWI 280 (359)
Q Consensus 250 ~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~ 280 (359)
.+++. |+..+++.. +. +..++..
T Consensus 231 svaFs--g~~LASa~~-~t-----IkLWd~~ 253 (588)
T 2j04_A 231 DLKIV--DYKVVLTCP-GY-----VHKIDLK 253 (588)
T ss_dssp CEEEE--TTEEEEECS-SE-----EEEEETT
T ss_pred EEEEE--CCEEEEEeC-Ce-----EEEEECC
Confidence 78886 555554443 32 5666543
No 233
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.70 E-value=1.2e-05 Score=70.69 Aligned_cols=202 Identities=13% Similarity=0.012 Sum_probs=120.0
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
....+++++++|+.++++..++.|..|+........ ....+.........+.++ ++.++.+
T Consensus 60 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~-----------------~~~~~~~~~~~i~~~~~~--~~~l~~~ 120 (313)
T 3odt_A 60 GFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGED-----------------PLYTLIGHQGNVCSLSFQ--DGVVISG 120 (313)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSC-----------------C-CEECCCSSCEEEEEEE--TTEEEEE
T ss_pred ccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCC-----------------cccchhhcccCEEEEEec--CCEEEEE
Confidence 456689999999988899999999999976531000 000122222334567774 5667767
Q ss_pred eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeC-CCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCc
Q 018242 114 DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQ-STGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQ 192 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~-~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 192 (359)
...+.|..++ .++....... ....+..+.+.+ +++.++.+ ...+.|..+|.. ..
T Consensus 121 ~~d~~i~~~d--~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~------------------~~d~~i~i~d~~-~~ 175 (313)
T 3odt_A 121 SWDKTAKVWK--EGSLVYNLQA----HNASVWDAKVVSFSENKFLTA------------------SADKTIKLWQND-KV 175 (313)
T ss_dssp ETTSEEEEEE--TTEEEEEEEC----CSSCEEEEEEEETTTTEEEEE------------------ETTSCEEEEETT-EE
T ss_pred eCCCCEEEEc--CCcEEEeccc----CCCceeEEEEccCCCCEEEEE------------------ECCCCEEEEecC-ce
Confidence 6666688888 3332222121 122455677776 77744444 234678888843 23
Q ss_pred EEEEeC-CCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCCCccc
Q 018242 193 VTVLLG-NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGIS 271 (359)
Q Consensus 193 ~~~~~~-~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~~~~ 271 (359)
...+.. .......++++++++ +++...++.|..|++...+ ....+....+....++++++|.++++..++.
T Consensus 176 ~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~---- 247 (313)
T 3odt_A 176 IKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHTGD--VLRTYEGHESFVYCIKLLPNGDIVSCGEDRT---- 247 (313)
T ss_dssp EEEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECTTSCEEEEETTSE----
T ss_pred EEEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCchh--hhhhhhcCCceEEEEEEecCCCEEEEecCCE----
Confidence 333332 344567899999986 5566678899999986432 1222322333356789999997666665433
Q ss_pred cccccCC-ccceeeecCCc
Q 018242 272 KLVLSFP-WIGNVLIKLPI 289 (359)
Q Consensus 272 ~~~~~~~-~~g~~~~~~~~ 289 (359)
+..++ ..++....+..
T Consensus 248 --v~iwd~~~~~~~~~~~~ 264 (313)
T 3odt_A 248 --VRIWSKENGSLKQVITL 264 (313)
T ss_dssp --EEEECTTTCCEEEEEEC
T ss_pred --EEEEECCCCceeEEEec
Confidence 55555 35555554433
No 234
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.69 E-value=1.1e-05 Score=73.88 Aligned_cols=200 Identities=12% Similarity=0.043 Sum_probs=118.3
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCe-EEEE
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGD-LYIA 113 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~-l~v~ 113 (359)
.-.+++++|+|+.+.++..++.+..||..+..... . . .+. ...+....+....+.+.++++. ++.+
T Consensus 110 ~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~------~-~---~~~---~~~~~gh~~~v~~~~~~~~~~~~l~s~ 176 (380)
T 3iz6_a 110 WVMECAFAPNGQSVACGGLDSACSIFNLSSQADRD------G-N---MPV---SRVLTGHKGYASSCQYVPDQETRLITG 176 (380)
T ss_dssp TCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCC------C-S---STT---CCBCCCCSSCCCCCBCCSSSSSCEEEE
T ss_pred CEEEEEECCCCCEEEEeeCCCcEEEEECCCCcccc------C-C---ccc---eeeccCCCcceEEEEEecCCCCEEEEE
Confidence 34578999999988888899999999986531000 0 0 000 0011122223445666664444 5555
Q ss_pred eCCCcEEEEeCCCCeEEEEee-cCCCccccccceEEEeC-CCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCC-
Q 018242 114 DAYFGLLKVGPEGGLATAVAT-QSEGIPFRFCNSLDIDQ-STGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPAT- 190 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~d~-~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~- 190 (359)
...+.|..+|..+++...... .........+..+.+.+ +++ ++++- +..+.|..||...
T Consensus 177 s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~sg-----------------s~D~~v~~wd~~~~ 238 (380)
T 3iz6_a 177 SGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNAN-MFISG-----------------SCDTTVRLWDLRIT 238 (380)
T ss_dssp CTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCC-EEEEE-----------------ETTSCEEEEETTTT
T ss_pred CCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCC-EEEEE-----------------ECCCeEEEEECCCC
Confidence 544568889998876543221 11111123456677765 677 66652 3356788888752
Q ss_pred -CcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCC-------CCCCceEECCCCCEEEE
Q 018242 191 -KQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLP-------GFPDNIKRSPRGGFWVG 262 (359)
Q Consensus 191 -~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~-------~~p~~i~~d~~G~lwv~ 262 (359)
.....+..+....+.++++|+++ .+++.+.++.|..||+.... ....+...+ .....++++++|++.++
T Consensus 239 ~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 315 (380)
T 3iz6_a 239 SRAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGH--QLQVYNREPDRNDNELPIVTSVAFSISGRLLFA 315 (380)
T ss_dssp CCCCEEECCCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTTE--EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEE
T ss_pred CcceEEECCcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCCc--EEEEecccccccccccCceEEEEECCCCCEEEE
Confidence 23334444445678999999998 56777788999999986532 112222111 12356899999987776
Q ss_pred EecCCC
Q 018242 263 IHSRRK 268 (359)
Q Consensus 263 ~~~~~~ 268 (359)
....+.
T Consensus 316 g~~dg~ 321 (380)
T 3iz6_a 316 GYSNGD 321 (380)
T ss_dssp ECTTSC
T ss_pred EECCCC
Confidence 655553
No 235
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.66 E-value=6.7e-05 Score=67.39 Aligned_cols=145 Identities=10% Similarity=0.023 Sum_probs=90.1
Q ss_pred cceEEEEec--CCCeEEEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeee
Q 018242 97 RPLGLCFNK--TNGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVI 174 (359)
Q Consensus 97 ~p~gi~~~~--~~g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~ 174 (359)
....+++++ ++..+..+...+.|..+|.++++........ ....+..++++|+|+ +.++
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~---~~~~i~~~~~~pdg~-~las--------------- 187 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAK---SDVEYSSGVLHKDSL-LLAL--------------- 187 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCC---SSCCCCEEEECTTSC-EEEE---------------
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecC---CCCceEEEEECCCCC-EEEE---------------
Confidence 356788887 5556665665666899999887764332111 122477899999999 5554
Q ss_pred eecCCCceEEEEeCCCCcEE--EEeC-CCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCc-ceeEeecCCCCCC-
Q 018242 175 LSGDKTGRLMKYDPATKQVT--VLLG-NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAG-TIEIVAQLPGFPD- 249 (359)
Q Consensus 175 ~~~~~~g~v~~~d~~~~~~~--~~~~-~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~p~- 249 (359)
+...+.|..||..+++.. .+.. +......++|+|+++.+..+. . +.|..||+...... ....+.. +..+-
T Consensus 188 --g~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~-~~v~iwd~~~~~~~~~~~~~~~-~~~~~~ 262 (343)
T 3lrv_A 188 --YSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-D-QTVVCFDLRKDVGTLAYPTYTI-PEFKTG 262 (343)
T ss_dssp --ECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-S-SBEEEEETTSSTTCBSSCCCBC------C
T ss_pred --EcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-C-CeEEEEEcCCCCcceeeccccc-cccccc
Confidence 133567999998876643 3333 345568999999998666655 4 49999998654221 1111111 11222
Q ss_pred --ceEECCCCCEEEEEec
Q 018242 250 --NIKRSPRGGFWVGIHS 265 (359)
Q Consensus 250 --~i~~d~~G~lwv~~~~ 265 (359)
.++++++|++.++...
T Consensus 263 ~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 263 TVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp CEEEEECTTSSEEEEEET
T ss_pred ceEEEECCCCCEEEEecC
Confidence 3999999987776544
No 236
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.65 E-value=3.2e-06 Score=75.39 Aligned_cols=192 Identities=11% Similarity=-0.016 Sum_probs=110.6
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecC-CCe-EEEE
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKT-NGD-LYIA 113 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~-~g~-l~v~ 113 (359)
-.+++++++|+++.++..++.|..||..+++..... .+.........+++++. +++ |..+
T Consensus 16 V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~------------------~l~gH~~~V~~v~~~~~~~~~~l~s~ 77 (316)
T 3bg1_A 16 IHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIA------------------DLRGHEGPVWQVAWAHPMYGNILASC 77 (316)
T ss_dssp EEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEE------------------EEECCSSCEEEEEECCGGGSSCEEEE
T ss_pred EEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEE------------------EEcCCCccEEEEEeCCCCCCCEEEEE
Confidence 458899999998889999999999998765322111 22223344678888652 344 4445
Q ss_pred eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCC--CCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCC
Q 018242 114 DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQS--TGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATK 191 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~--g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 191 (359)
...+.|..+|.++++...... ..+ ....++.++++|+ |. +.++- ...+.|..++..++
T Consensus 78 s~D~~v~iWd~~~~~~~~~~~-~~~-h~~~V~~v~~~p~~~g~-~lasg-----------------s~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 78 SYDRKVIIWREENGTWEKSHE-HAG-HDSSVNSVCWAPHDYGL-ILACG-----------------SSDGAISLLTYTGE 137 (316)
T ss_dssp ETTSCEEEECCSSSCCCEEEE-ECC-CSSCCCEEEECCTTTCS-CEEEE-----------------CSSSCEEEEEECSS
T ss_pred ECCCEEEEEECCCCcceEEEE-ccC-CCCceEEEEECCCCCCc-EEEEE-----------------cCCCCEEEEecCCC
Confidence 555568888988764222111 111 1235778999987 66 44441 23456777776543
Q ss_pred c-EEEE---eCCCCCCceEEEccCC----------------CEEEEEecCCCEEEEEEcCCCCCcceeEeecC---CCCC
Q 018242 192 Q-VTVL---LGNLSFPNGVALSEDG----------------NYILLAETTSCRILRYWLKTSKAGTIEIVAQL---PGFP 248 (359)
Q Consensus 192 ~-~~~~---~~~~~~p~gia~~~d~----------------~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~p 248 (359)
. .... .........++++|+. ..++++...++.|..|++.... ..+....+ ....
T Consensus 138 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~--~~~~~~~l~~h~~~V 215 (316)
T 3bg1_A 138 GQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG--QWKEEQKLEAHSDWV 215 (316)
T ss_dssp SCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTS--CEEEEECCBCCSSCE
T ss_pred CCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCC--ccceeeecccCCCce
Confidence 2 2211 1122234567777762 1257777788899999975321 11112222 2234
Q ss_pred CceEECCCC----CEEEEEecCC
Q 018242 249 DNIKRSPRG----GFWVGIHSRR 267 (359)
Q Consensus 249 ~~i~~d~~G----~lwv~~~~~~ 267 (359)
..+++.+++ ++.++....+
T Consensus 216 ~~v~~sp~~~~~~~~las~s~D~ 238 (316)
T 3bg1_A 216 RDVAWAPSIGLPTSTIASCSQDG 238 (316)
T ss_dssp EEEECCCCSSCSCCEEEEEETTC
T ss_pred EEEEecCCCCCCCceEEEEcCCC
Confidence 567888875 5555544444
No 237
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.65 E-value=3.1e-06 Score=79.05 Aligned_cols=156 Identities=13% Similarity=0.081 Sum_probs=97.8
Q ss_pred CceEEEcc-CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE-E
Q 018242 36 PESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI-A 113 (359)
Q Consensus 36 p~~i~~~~-~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v-~ 113 (359)
-.++++.| ++++++++..++.|..||..++....+... .........+.+++ ++.+++ +
T Consensus 167 V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~------------------~~~~~~~~~~~~~~-~~~~l~~g 227 (435)
T 4e54_B 167 ITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASS------------------DTINIWFCSLDVSA-SSRMVVTG 227 (435)
T ss_dssp CCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECC------------------SSCSCCCCCEEEET-TTTEEEEE
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEecc------------------CCCCccEEEEEECC-CCCEEEEE
Confidence 45899997 688788899999999999987654443211 11112235688998 555544 4
Q ss_pred eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcE
Q 018242 114 DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQV 193 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 193 (359)
...+.|..+|.++..+..+.. ....+..++++|+++.++++- +..+.|..||..+.+.
T Consensus 228 ~~dg~i~~wd~~~~~~~~~~~-----h~~~v~~v~~~p~~~~~~~s~-----------------s~d~~v~iwd~~~~~~ 285 (435)
T 4e54_B 228 DNVGNVILLNMDGKELWNLRM-----HKKKVTHVALNPCCDWFLATA-----------------SVDQTVKIWDLRQVRG 285 (435)
T ss_dssp CSSSBEEEEESSSCBCCCSBC-----CSSCEEEEEECTTCSSEEEEE-----------------ETTSBCCEEETTTCCS
T ss_pred eCCCcEeeeccCcceeEEEec-----ccceEEeeeecCCCceEEEEe-----------------cCcceeeEEecccccc
Confidence 444558888987655332211 123567899999987455441 2245677777654332
Q ss_pred EE-E---eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC
Q 018242 194 TV-L---LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS 233 (359)
Q Consensus 194 ~~-~---~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~ 233 (359)
.. + ..+......++|+||++.| ++...++.|..|++...
T Consensus 286 ~~~~~~~~~h~~~v~~~~~spdg~~l-~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 286 KASFLYSLPHRHPVNAACFSPDGARL-LTTDQKSEIRVYSASQW 328 (435)
T ss_dssp SSCCSBCCBCSSCEEECCBCTTSSEE-EEEESSSCEEEEESSSS
T ss_pred cceEEEeeeccccccceeECCCCCee-EEEcCCCEEEEEECCCC
Confidence 11 1 1122335688999999854 55567789999998653
No 238
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.65 E-value=3.2e-06 Score=75.55 Aligned_cols=203 Identities=12% Similarity=0.051 Sum_probs=126.0
Q ss_pred CCCceEEEccCCC-eeEEecCCCEEEEEEc-CCcceEEEeecCCCCCCCCCCcccccccccc--cCCcceEEEEecCCCe
Q 018242 34 IGPESLAFDALGE-GPYTGVSDGRIIKWHQ-DQRRWLHFARTSPNRDGCEGAYEYDHAAKEH--ICGRPLGLCFNKTNGD 109 (359)
Q Consensus 34 ~~p~~i~~~~~G~-~l~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~gi~~~~~~g~ 109 (359)
....+++++++|+ .++++..++.|..||. .+++...+ .. .......+++++ ++.
T Consensus 57 ~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~---------------------~~~~~~~~v~~l~~~~-~~~ 114 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQAL---------------------TNNEANLGICRICKYG-DDK 114 (342)
T ss_dssp SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEEC---------------------BSCCCCSCEEEEEEET-TTE
T ss_pred CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEec---------------------cccCCCCceEEEEeCC-CCE
Confidence 4567899999999 8999999999999999 87644332 22 334467899998 777
Q ss_pred EEEEeCCCcEEEEeCCC---------CeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCC
Q 018242 110 LYIADAYFGLLKVGPEG---------GLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKT 180 (359)
Q Consensus 110 l~v~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~ 180 (359)
++.+...+.|..+|..+ ++. + .... ....+..+.+++++ ++++ ...
T Consensus 115 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~-~~~~--~~~~v~~~~~~~~~--l~~~------------------~~d 169 (342)
T 1yfq_A 115 LIAASWDGLIEVIDPRNYGDGVIAVKNLN--S-NNTK--VKNKIFTMDTNSSR--LIVG------------------MNN 169 (342)
T ss_dssp EEEEETTSEEEEECHHHHTTBCEEEEESC--S-SSSS--SCCCEEEEEECSSE--EEEE------------------EST
T ss_pred EEEEcCCCeEEEEcccccccccccccCCe--e-eEEe--eCCceEEEEecCCc--EEEE------------------eCC
Confidence 77777666688888754 221 1 1111 12356778888776 5555 224
Q ss_pred ceEEEEeCCC-Cc--EEEEe-CCCCCCceEEEcc-CCCEEEEEecCCCEEEEEEcCCC--C--CcceeEeecCC------
Q 018242 181 GRLMKYDPAT-KQ--VTVLL-GNLSFPNGVALSE-DGNYILLAETTSCRILRYWLKTS--K--AGTIEIVAQLP------ 245 (359)
Q Consensus 181 g~v~~~d~~~-~~--~~~~~-~~~~~p~gia~~~-d~~~l~v~~~~~~~i~~~~~~~~--~--~~~~~~~~~~~------ 245 (359)
+.|..||..+ +. ..... .....+..++++| +++. +++...++.+..|+++.. . ......+....
T Consensus 170 ~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~-l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (342)
T 1yfq_A 170 SQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEG-YACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDT 248 (342)
T ss_dssp TEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCE-EEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCC
T ss_pred CeEEEEECCccccccceeeecCCCCceeEEEECCCCCCE-EEEEecCCcEEEEEEcCCCcccccccceeeeccccccccc
Confidence 5788888876 33 22222 2234567899999 8885 555556789999988654 1 11222232211
Q ss_pred ---CCCCceEECCCCCEEEEEecCCCccccccccCCc-cceeeecCCc
Q 018242 246 ---GFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFPW-IGNVLIKLPI 289 (359)
Q Consensus 246 ---~~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~-~g~~~~~~~~ 289 (359)
.....++++++|++.++....+. +..++. .++.+..+..
T Consensus 249 ~~~~~i~~~~~s~~~~~l~~~~~dg~-----i~vwd~~~~~~~~~~~~ 291 (342)
T 1yfq_A 249 NLAYPVNSIEFSPRHKFLYTAGSDGI-----ISCWNLQTRKKIKNFAK 291 (342)
T ss_dssp SSCCCEEEEEECTTTCCEEEEETTSC-----EEEEETTTTEEEEECCC
T ss_pred ccceeEEEEEEcCCCCEEEEecCCce-----EEEEcCccHhHhhhhhc
Confidence 13456888999875554444443 555543 4665555443
No 239
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.65 E-value=2.6e-06 Score=84.68 Aligned_cols=147 Identities=10% Similarity=-0.017 Sum_probs=92.9
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEe
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIAD 114 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~ 114 (359)
.+.+++++|||++++. ..++.|+.||..+++........ .........++++|++..|..+.
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~-----------------~~~~~~v~~~~~SpDg~~l~~~~ 79 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGK-----------------KIESLRAIRYEISPDREYALFSY 79 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTT-----------------TTTTTTCSEEEECTTSSEEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccc-----------------cccccccceEEECCCCCEEEEEe
Confidence 4788999999995554 56789999999887544332100 00001356899999444455554
Q ss_pred CC---------CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEE
Q 018242 115 AY---------FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMK 185 (359)
Q Consensus 115 ~~---------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 185 (359)
.. ..|+.+|.++++.+.+... . .....+..++++|||++|.++. .+.|+.
T Consensus 80 ~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~-~-~~~~~~~~~~~SPdG~~la~~~-------------------~~~i~~ 138 (723)
T 1xfd_A 80 NVEPIYQHSYTGYYVLSKIPHGDPQSLDPP-E-VSNAKLQYAGWGPKGQQLIFIF-------------------ENNIYY 138 (723)
T ss_dssp SCCCCSSSCCCSEEEEEESSSCCCEECCCT-T-CCSCCCSBCCBCSSTTCEEEEE-------------------TTEEEE
T ss_pred cCccceeecceeeEEEEECCCCceEeccCC-c-cccccccccEECCCCCEEEEEE-------------------CCeEEE
Confidence 32 3578899988876444221 1 1112366789999998565551 147999
Q ss_pred EeCCCCcEEEEeCC-CC------------------CCceEEEccCCCEEEEEec
Q 018242 186 YDPATKQVTVLLGN-LS------------------FPNGVALSEDGNYILLAET 220 (359)
Q Consensus 186 ~d~~~~~~~~~~~~-~~------------------~p~gia~~~d~~~l~v~~~ 220 (359)
++..+++...+... .. ...+++++|||+.|+++..
T Consensus 139 ~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~ 192 (723)
T 1xfd_A 139 CAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI 192 (723)
T ss_dssp ESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred EECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEE
Confidence 99887766554332 11 2257999999998777653
No 240
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.63 E-value=8.4e-05 Score=66.03 Aligned_cols=187 Identities=12% Similarity=0.097 Sum_probs=113.3
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEe
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIAD 114 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~ 114 (359)
...+++++++|++++++..++.|..|+.......... .........+.+.+.+..++.+.
T Consensus 88 ~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~l~s~s 147 (340)
T 4aow_A 88 FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF--------------------VGHTKDVLSVAFSSDNRQIVSGS 147 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE--------------------ECCSSCEEEEEECTTSSCEEEEE
T ss_pred CEEEEEECCCCCEEEEEcccccceEEeecccceeeee--------------------cCCCCceeEEEEeecCccceeec
Confidence 4568899999998888999999999998876332211 11222344566777455555555
Q ss_pred CCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCE-EEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcE
Q 018242 115 AYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGI-IYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQV 193 (359)
Q Consensus 115 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 193 (359)
..+.+..++............. ....+..+.+.+++.. ++++. ...+.|..+|..+++.
T Consensus 148 ~d~~~~~~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~s~-----------------~~d~~i~i~d~~~~~~ 207 (340)
T 4aow_A 148 RDKTIKLWNTLGVCKYTVQDES---HSEWVSCVRFSPNSSNPIIVSC-----------------GWDKLVKVWNLANCKL 207 (340)
T ss_dssp TTSCEEEECTTSCEEEEECSSS---CSSCEEEEEECSCSSSCEEEEE-----------------ETTSCEEEEETTTTEE
T ss_pred CCCeEEEEEeCCCceEEEEecc---ccCcccceEEccCCCCcEEEEE-----------------cCCCEEEEEECCCCce
Confidence 5556777887765433221111 1224455666655431 44441 2345788899887766
Q ss_pred EEEe-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEec
Q 018242 194 TVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHS 265 (359)
Q Consensus 194 ~~~~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~ 265 (359)
.... ........++++|+++. +++...++.|..|++...+ ....+ ........+++.+++.+.++..+
T Consensus 208 ~~~~~~h~~~v~~~~~s~~~~~-l~s~s~Dg~i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~~~~~~~~~d 276 (340)
T 4aow_A 208 KTNHIGHTGYLNTVTVSPDGSL-CASGGKDGQAMLWDLNEGK--HLYTL-DGGDIINALCFSPNRYWLCAATG 276 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSE-EEEEETTCEEEEEETTTTE--EEEEE-ECSSCEEEEEECSSSSEEEEEET
T ss_pred eeEecCCCCcEEEEEECCCCCE-EEEEeCCCeEEEEEeccCc--eeeee-cCCceEEeeecCCCCceeeccCC
Confidence 5443 23344578999999984 5556677899999976431 11111 12223455778888877776654
No 241
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.63 E-value=2.5e-05 Score=77.49 Aligned_cols=211 Identities=11% Similarity=0.019 Sum_probs=127.3
Q ss_pred CCceEEEccCC-CeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 35 GPESLAFDALG-EGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 35 ~p~~i~~~~~G-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
.-.++++.+++ +++.++..++.|..|+..+..... +.....+.........+++++++..|..+
T Consensus 384 ~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~---------------~~~~~~~~~h~~~v~~v~~s~~g~~l~sg 448 (694)
T 3dm0_A 384 MVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY---------------GVAQRRLTGHSHFVEDVVLSSDGQFALSG 448 (694)
T ss_dssp CEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS---------------CEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred eeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc---------------ccccceecCCCCcEEEEEECCCCCEEEEE
Confidence 44578888764 667788999999999986531000 00000122233446789999944444445
Q ss_pred eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcE
Q 018242 114 DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQV 193 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 193 (359)
...+.|..+|..+++....... ....+..++++++|+ ..++- +..+.|..||..+...
T Consensus 449 s~Dg~v~vwd~~~~~~~~~~~~----h~~~v~~~~~s~~~~-~l~s~-----------------s~D~~i~iwd~~~~~~ 506 (694)
T 3dm0_A 449 SWDGELRLWDLAAGVSTRRFVG----HTKDVLSVAFSLDNR-QIVSA-----------------SRDRTIKLWNTLGECK 506 (694)
T ss_dssp ETTSEEEEEETTTTEEEEEEEC----CSSCEEEEEECTTSS-CEEEE-----------------ETTSCEEEECTTSCEE
T ss_pred eCCCcEEEEECCCCcceeEEeC----CCCCEEEEEEeCCCC-EEEEE-----------------eCCCEEEEEECCCCcc
Confidence 5455688899988765432221 123567899999999 44441 2356788888765433
Q ss_pred EEEeCC----CCCCceEEEccCCC-EEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCCC
Q 018242 194 TVLLGN----LSFPNGVALSEDGN-YILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRK 268 (359)
Q Consensus 194 ~~~~~~----~~~p~gia~~~d~~-~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~ 268 (359)
..+... ......++++|++. .++++.+.++.|..|++...+. ...+....+....++++++|++.++....+.
T Consensus 507 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~--~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~ 584 (694)
T 3dm0_A 507 YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL--RSTLAGHTGYVSTVAVSPDGSLCASGGKDGV 584 (694)
T ss_dssp EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCE--EEEECCCSSCEEEEEECTTSSEEEEEETTSB
T ss_pred eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcE--EEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe
Confidence 333221 22346788998763 3677777889999999865321 1222222333566899999988776655554
Q ss_pred ccccccccCC-ccceeeecCCc
Q 018242 269 GISKLVLSFP-WIGNVLIKLPI 289 (359)
Q Consensus 269 ~~~~~~~~~~-~~g~~~~~~~~ 289 (359)
+.+++ ..++.+..+..
T Consensus 585 -----i~iwd~~~~~~~~~~~~ 601 (694)
T 3dm0_A 585 -----VLLWDLAEGKKLYSLEA 601 (694)
T ss_dssp -----CEEEETTTTEEEECCBC
T ss_pred -----EEEEECCCCceEEEecC
Confidence 55554 35665555443
No 242
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.63 E-value=2.5e-06 Score=84.95 Aligned_cols=140 Identities=9% Similarity=-0.004 Sum_probs=89.8
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA 115 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~ 115 (359)
+.++.+.++|+ ++....++.|+.||..+++.+.+... ..........++++|++..|.++..
T Consensus 18 ~~~~~~s~dg~-~~~~~~d~~i~~~~~~~g~~~~~~~~-----------------~~~~~~~~~~~~~SpDg~~la~~~~ 79 (719)
T 1z68_A 18 TFFPNWISGQE-YLHQSADNNIVLYNIETGQSYTILSN-----------------RTMKSVNASNYGLSPDRQFVYLESD 79 (719)
T ss_dssp CCCCEESSSSE-EEEECTTSCEEEEESSSCCEEEEECH-----------------HHHHTTTCSEEEECTTSSEEEEEEE
T ss_pred CCccEECCCCe-EEEEcCCCCEEEEEcCCCcEEEEEcc-----------------ccccccceeeEEECCCCCeEEEEec
Confidence 45889999997 55555678999999988765443210 0000012457889994455555543
Q ss_pred ---------CCcEEEEeCCCCeE---EEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceE
Q 018242 116 ---------YFGLLKVGPEGGLA---TAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRL 183 (359)
Q Consensus 116 ---------~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 183 (359)
...|+.+|.++++. ..+ . ..+..++++|||++|.++. .+.|
T Consensus 80 ~~~~~~~s~~~~i~~~d~~~g~~~~~~~l----~----~~~~~~~~SPDG~~la~~~-------------------~~~i 132 (719)
T 1z68_A 80 YSKLWRYSYTATYYIYDLSNGEFVRGNEL----P----RPIQYLCWSPVGSKLAYVY-------------------QNNI 132 (719)
T ss_dssp EEECSSSCEEEEEEEEETTTTEECCSSCC----C----SSBCCEEECSSTTCEEEEE-------------------TTEE
T ss_pred CceeEEeecceEEEEEECCCCccccceec----C----cccccceECCCCCEEEEEE-------------------CCeE
Confidence 23588899998875 221 1 2466799999999665551 2479
Q ss_pred EEEeCCCCcEEEEeCCC-------------------CCCceEEEccCCCEEEEEec
Q 018242 184 MKYDPATKQVTVLLGNL-------------------SFPNGVALSEDGNYILLAET 220 (359)
Q Consensus 184 ~~~d~~~~~~~~~~~~~-------------------~~p~gia~~~d~~~l~v~~~ 220 (359)
+.++..+++...+.... ....+++++|||+.|+.+..
T Consensus 133 ~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~ 188 (719)
T 1z68_A 133 YLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEF 188 (719)
T ss_dssp EEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEE
T ss_pred EEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEE
Confidence 99998777665443211 11247999999998776653
No 243
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.62 E-value=3.8e-06 Score=86.01 Aligned_cols=198 Identities=15% Similarity=0.058 Sum_probs=128.7
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
....+++++|+|+++.++..++.|..|+..+.+... ... .......++|++ +..|..+
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~--------------------~~~-~~~~V~~l~fsp-g~~L~S~ 75 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVI--------------------KLE-DRSAIKEMRFVK-GIYLVVI 75 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEE--------------------ECS-SCCCEEEEEEET-TTEEEEE
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEE--------------------EcC-CCCCEEEEEEcC-CCEEEEE
Confidence 456799999999988899999999999987653221 111 123467899998 5556666
Q ss_pred eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcE
Q 018242 114 DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQV 193 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 193 (359)
...+.|..+|.++++...... . ...+..++++|+|++++++ ...+.|..||.+++..
T Consensus 76 s~D~~v~lWd~~~~~~~~~~~-~----~~~V~~v~~sp~g~~l~sg------------------s~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 76 NAKDTVYVLSLYSQKVLTTVF-V----PGKITSIDTDASLDWMLIG------------------LQNGSMIVYDIDRDQL 132 (902)
T ss_dssp ETTCEEEEEETTTCSEEEEEE-C----SSCEEEEECCTTCSEEEEE------------------ETTSCEEEEETTTTEE
T ss_pred ECcCeEEEEECCCCcEEEEEc-C----CCCEEEEEECCCCCEEEEE------------------cCCCcEEEEECCCCcc
Confidence 656668899998876432222 1 1356789999999966665 2356799999887765
Q ss_pred EEEe------------CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecC-----------------
Q 018242 194 TVLL------------GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL----------------- 244 (359)
Q Consensus 194 ~~~~------------~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~----------------- 244 (359)
..+. ........++|+|++..++++...++.| .||+..... ...+...
T Consensus 133 ~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~ 209 (902)
T 2oaj_A 133 SSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI--KQSFIYELPPFAPGGDFSEKTNEK 209 (902)
T ss_dssp EEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE--EEEECCCBCTTCCCSTTCCCTTSC
T ss_pred ccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCce--EEEEecccCCcCCCcccccccccc
Confidence 3211 1223467899999754466667788899 999865421 1122110
Q ss_pred -CCCCCceEECCCCCEEEEEecCCCccccccccCCc-cceee
Q 018242 245 -PGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFPW-IGNVL 284 (359)
Q Consensus 245 -~~~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~-~g~~~ 284 (359)
......+++.++|++.++....+. +..++. +++.+
T Consensus 210 h~~~V~~v~fspdg~~lasgs~Dg~-----i~lWd~~~g~~~ 246 (902)
T 2oaj_A 210 RTPKVIQSLYHPNSLHIITIHEDNS-----LVFWDANSGHMI 246 (902)
T ss_dssp BCCCEEEEEECTTSSEEEEEETTCC-----EEEEETTTCCEE
T ss_pred cCCCeEEEEEcCCCCEEEEEECCCe-----EEEEECCCCcEE
Confidence 012345889999987776665554 555543 45543
No 244
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.61 E-value=1.9e-05 Score=78.98 Aligned_cols=142 Identities=8% Similarity=-0.039 Sum_probs=86.7
Q ss_pred ceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC
Q 018242 37 ESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY 116 (359)
Q Consensus 37 ~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~ 116 (359)
.++.+.+||.+++.+ ++.|+.||..+++-+.+.... ...........+.++|++..|.++...
T Consensus 20 ~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~Spdg~~l~~~~~~ 82 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENS---------------TFDEFGHSINDYSISPDGQFILLEYNY 82 (740)
T ss_dssp CCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTT---------------TTTTCCSCCCEEEECTTSSEEEEEEEE
T ss_pred cccEECCCCcEEEEc--CCcEEEEECCCCceEEEEech---------------hhhhhcccccceEECCCCCEEEEEECC
Confidence 378999999855555 789999999887544332110 001111122347889955555555421
Q ss_pred ---------CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEe
Q 018242 117 ---------FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYD 187 (359)
Q Consensus 117 ---------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 187 (359)
..++.+|.++++.+.+... .......+++|||++|.++. .+.|+.++
T Consensus 83 ~~~~r~~~~~~~~~~d~~~~~~~~l~~~-----~~~~~~~~~SPdG~~la~~~-------------------~~~i~~~~ 138 (740)
T 4a5s_A 83 VKQWRHSYTASYDIYDLNKRQLITEERI-----PNNTQWVTWSPVGHKLAYVW-------------------NNDIYVKI 138 (740)
T ss_dssp EECSSSCEEEEEEEEETTTTEECCSSCC-----CTTEEEEEECSSTTCEEEEE-------------------TTEEEEES
T ss_pred eeeEEEccceEEEEEECCCCcEEEcccC-----CCcceeeEECCCCCEEEEEE-------------------CCeEEEEE
Confidence 2367899999876543211 12456789999999665551 23688888
Q ss_pred CCCCcEEEEeCCC-------------------CCCceEEEccCCCEEEEEe
Q 018242 188 PATKQVTVLLGNL-------------------SFPNGVALSEDGNYILLAE 219 (359)
Q Consensus 188 ~~~~~~~~~~~~~-------------------~~p~gia~~~d~~~l~v~~ 219 (359)
..++....+.... ....+++++|||+.|....
T Consensus 139 ~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 139 EPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp STTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred CCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEE
Confidence 8777655442211 1123588999999766653
No 245
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.60 E-value=1.3e-05 Score=77.51 Aligned_cols=204 Identities=12% Similarity=0.137 Sum_probs=122.3
Q ss_pred CceEEEcc--CCCeeEEecCCCEEEEEEcCCc------ceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCC
Q 018242 36 PESLAFDA--LGEGPYTGVSDGRIIKWHQDQR------RWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTN 107 (359)
Q Consensus 36 p~~i~~~~--~G~~l~~~~~~~~i~~~d~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~ 107 (359)
..+++++| +|++++++..++.|..||..++ +..... .+.........+++++++
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~------------------~~~~~~~~v~~~~~s~~~ 128 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKS------------------EFQVLAGPISDISWDFEG 128 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEE------------------EEECCSSCEEEEEECTTS
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccc------------------hhhcccccEEEEEEeCCC
Confidence 57899999 9998888889999999998643 111111 122223446789999955
Q ss_pred CeEEEEeCC----CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceE
Q 018242 108 GDLYIADAY----FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRL 183 (359)
Q Consensus 108 g~l~v~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 183 (359)
..++++... ..|..++ .++...... + ....+..+.++++++.++++- ...+.|
T Consensus 129 ~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~---~-~~~~v~~~~~~~~~~~~l~~~-----------------~~d~~v 185 (615)
T 1pgu_A 129 RRLCVVGEGRDNFGVFISWD--SGNSLGEVS---G-HSQRINACHLKQSRPMRSMTV-----------------GDDGSV 185 (615)
T ss_dssp SEEEEEECCSSCSEEEEETT--TCCEEEECC---S-CSSCEEEEEECSSSSCEEEEE-----------------ETTTEE
T ss_pred CEEEEeccCCCCccEEEEEE--CCCcceeee---c-CCccEEEEEECCCCCcEEEEE-----------------eCCCcE
Confidence 555555433 2355556 333222111 1 223577899999997333331 235678
Q ss_pred EEEeCCCCcEEEEeC-CCC---CCceEEEccC-CCEEEEEecCCCEEEEEEcCCCCCcceeEe-e---cCCCCCCceEEC
Q 018242 184 MKYDPATKQVTVLLG-NLS---FPNGVALSED-GNYILLAETTSCRILRYWLKTSKAGTIEIV-A---QLPGFPDNIKRS 254 (359)
Q Consensus 184 ~~~d~~~~~~~~~~~-~~~---~p~gia~~~d-~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~---~~~~~p~~i~~d 254 (359)
..||..+++...... ... ....++++|+ ++.+ ++...++.|..|++...+. ...+ . ........+++.
T Consensus 186 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~~v~~~~~~ 262 (615)
T 1pgu_A 186 VFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFV-ITVGSDRKISCFDGKSGEF--LKYIEDDQEPVQGGIFALSWL 262 (615)
T ss_dssp EEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEE-EEEETTCCEEEEETTTCCE--EEECCBTTBCCCSCEEEEEES
T ss_pred EEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEE-EEEeCCCeEEEEECCCCCE--eEEecccccccCCceEEEEEc
Confidence 999987766544333 333 4678999999 8754 4455678999999764321 2222 1 112234568888
Q ss_pred CCCCEEEEEecCCCccccccccCCc-cceeeecCCc
Q 018242 255 PRGGFWVGIHSRRKGISKLVLSFPW-IGNVLIKLPI 289 (359)
Q Consensus 255 ~~G~lwv~~~~~~~~~~~~~~~~~~-~g~~~~~~~~ 289 (359)
+|++.++....+. +..++. .++.+..+..
T Consensus 263 -~~~~l~~~~~d~~-----i~~wd~~~~~~~~~~~~ 292 (615)
T 1pgu_A 263 -DSQKFATVGADAT-----IRVWDVTTSKCVQKWTL 292 (615)
T ss_dssp -SSSEEEEEETTSE-----EEEEETTTTEEEEEEEC
T ss_pred -CCCEEEEEcCCCc-----EEEEECCCCcEEEEEcC
Confidence 8876665555443 455543 4665555443
No 246
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.59 E-value=0.00027 Score=61.99 Aligned_cols=152 Identities=11% Similarity=0.070 Sum_probs=90.3
Q ss_pred ceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC
Q 018242 37 ESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY 116 (359)
Q Consensus 37 ~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~ 116 (359)
..|++++++ +|.++. ++.|..||..+++..... ...........+++++++..+..+...
T Consensus 29 ~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~------------------~~~~~~~~V~~v~~~~~~~~l~sgs~D 88 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLL------------------QMEQPGEYISSVAWIKEGNYLAVGTSS 88 (318)
T ss_dssp BCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEE------------------ECCSTTCCEEEEEECTTSSEEEEEETT
T ss_pred eEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEE------------------EecCCCCeEEEEEECCCCCEEEEEECC
Confidence 468898876 466664 689999999987544321 122223346789999944445555545
Q ss_pred CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCc--EE
Q 018242 117 FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQ--VT 194 (359)
Q Consensus 117 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~--~~ 194 (359)
+.|..++.++++....... . ...-..+..+++ +.++. ...+.+..++..+.. ..
T Consensus 89 g~v~iw~~~~~~~~~~~~~-h-----~~~~~~~~~~~~-~l~s~-----------------~~~~~~~~~~~~~~~~~~~ 144 (318)
T 4ggc_A 89 AEVQLWDVQQQKRLRNMTS-H-----SARVGSLSWNSY-ILSSG-----------------SRSGHIHHHDVRVAEHHVA 144 (318)
T ss_dssp SEEEEEETTTTEEEEEEEC-C-----SSCEEEEEEETT-EEEEE-----------------ETTSEEEEEETTSSSCEEE
T ss_pred CcEEEeecCCceeEEEecC-c-----cceEEEeecCCC-EEEEE-----------------ecCCceEeeecCCCceeEE
Confidence 5588889998875432221 1 111234455566 44431 123445555554332 22
Q ss_pred EEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC
Q 018242 195 VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS 233 (359)
Q Consensus 195 ~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~ 233 (359)
...........+++.++++. +++...++.|..|++...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 145 TLSGHSQEVCGLRWAPDGRH-LASGGNDNLVNVWPSAPG 182 (318)
T ss_dssp EEECCSSCEEEEEECTTSSE-EEEEETTSCEEEEESSCB
T ss_pred EEcCccCceEEEEEcCCCCE-EEEEecCcceeEEECCCC
Confidence 23344445667888888884 556667789999998654
No 247
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.58 E-value=4.9e-06 Score=75.99 Aligned_cols=190 Identities=13% Similarity=0.045 Sum_probs=104.3
Q ss_pred CceEEEccCCCeeEEe-cC--CCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCc-ceEEEEecCCCeEE
Q 018242 36 PESLAFDALGEGPYTG-VS--DGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGR-PLGLCFNKTNGDLY 111 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~-~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~gi~~~~~~g~l~ 111 (359)
+.+++++|||+.++.. .. ...|+.+|..+++...+. ..... ..++.+++++..|+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~---------------------~~~~~~~~~~~~spdg~~l~ 96 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLT---------------------EGKGDNTFGGFISTDERAFF 96 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECC---------------------CSSCBCTTTCEECTTSSEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEee---------------------cCCCCccccceECCCCCEEE
Confidence 6778899999865443 32 247999999887544321 11111 12356788555665
Q ss_pred EEeCCCcEEEEeCCCCeEEEEeecCCCccccccc--e----------------EEEeCCCCEEEEEeCCCccccccceee
Q 018242 112 IADAYFGLLKVGPEGGLATAVATQSEGIPFRFCN--S----------------LDIDQSTGIIYFTDSSSQFQRRNHISV 173 (359)
Q Consensus 112 v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------------l~~d~~g~~l~v~d~~~~~~~~~~~~~ 173 (359)
++.....|++++.++++.+.+...... ..+. . ..++|+|+++.+...
T Consensus 97 ~~~~~~~l~~~d~~~~~~~~~~~~~~~---~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~------------ 161 (396)
T 3c5m_A 97 YVKNELNLMKVDLETLEEQVIYTVDEE---WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEF------------ 161 (396)
T ss_dssp EEETTTEEEEEETTTCCEEEEEECCTT---EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH------------
T ss_pred EEEcCCcEEEEECCCCCcEEEEecccc---cCCCCCEEEeccCCccccccccccccCCCCcceeeeee------------
Confidence 665555699999988876554331111 0010 0 112233331111100
Q ss_pred eeecCCCceEEEEeCCCCcEEEEeCCCCCCceEEEcc-CCCEEEEEecCC-----CEEEEEEcCCCCCcceeEeec-C-C
Q 018242 174 ILSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSE-DGNYILLAETTS-----CRILRYWLKTSKAGTIEIVAQ-L-P 245 (359)
Q Consensus 174 ~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~-d~~~l~v~~~~~-----~~i~~~~~~~~~~~~~~~~~~-~-~ 245 (359)
........|+.+|.++++...+.........++++| |++.+++..... ..|+.+++++... +.+.. . .
T Consensus 162 -~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~---~~l~~~~~~ 237 (396)
T 3c5m_A 162 -YHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV---RKIKEHAEG 237 (396)
T ss_dssp -HHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC---EESSCCCTT
T ss_pred -ccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce---eEeeccCCC
Confidence 000224579999998887766554444456788999 777555544332 4799998754321 11111 1 1
Q ss_pred CCCCceEECCCCC-EEEEEec
Q 018242 246 GFPDNIKRSPRGG-FWVGIHS 265 (359)
Q Consensus 246 ~~p~~i~~d~~G~-lwv~~~~ 265 (359)
..+..++++++|+ |+++...
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~ 258 (396)
T 3c5m_A 238 ESCTHEFWIPDGSAMAYVSYF 258 (396)
T ss_dssp EEEEEEEECTTSSCEEEEEEE
T ss_pred ccccceEECCCCCEEEEEecC
Confidence 1234468899996 5655544
No 248
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.58 E-value=0.00019 Score=66.44 Aligned_cols=266 Identities=11% Similarity=0.066 Sum_probs=140.1
Q ss_pred ceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC
Q 018242 37 ESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY 116 (359)
Q Consensus 37 ~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~ 116 (359)
..|++++++ +|.++. ++.|+.||..+++..... ...........+++++++..|.++...
T Consensus 109 ~~l~wS~~n-~lAvgl-d~tV~lWd~~tg~~~~~~------------------~~~~~~~~V~sv~fspdg~~lasgs~D 168 (420)
T 4gga_A 109 NLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLL------------------QMEQPGEYISSVAWIKEGNYLAVGTSS 168 (420)
T ss_dssp BCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEE------------------ECCSTTCCEEEEEECTTSSEEEEEETT
T ss_pred eeEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEE------------------EecCCCCcEEEEEECCCCCEEEEEECC
Confidence 457777654 476766 689999999988654321 222223346789999944555556655
Q ss_pred CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCc--EE
Q 018242 117 FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQ--VT 194 (359)
Q Consensus 117 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~--~~ 194 (359)
+.|..++.++++....... . ...+. .+..+++ +.++- ...+.+..+|..... ..
T Consensus 169 g~v~iWd~~~~~~~~~~~~-h---~~~v~--~~s~~~~-~l~sg-----------------s~d~~i~~~d~~~~~~~~~ 224 (420)
T 4gga_A 169 AEVQLWDVQQQKRLRNMTS-H---SARVG--SLSWNSY-ILSSG-----------------SRSGHIHHHDVRVAEHHVA 224 (420)
T ss_dssp SCEEEEETTTTEEEEEECC-C---SSCEE--EEEEETT-EEEEE-----------------ETTSEEEEEETTSSSCEEE
T ss_pred CeEEEEEcCCCcEEEEEeC-C---CCceE--EEeeCCC-EEEEE-----------------eCCCceeEeeecccceeeE
Confidence 5688999998875432221 1 11223 3344566 44441 234567777765432 22
Q ss_pred EEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcc--eeEeecCCCCCCceEECCCC-CEEEEEecC-CCcc
Q 018242 195 VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGT--IEIVAQLPGFPDNIKRSPRG-GFWVGIHSR-RKGI 270 (359)
Q Consensus 195 ~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~p~~i~~d~~G-~lwv~~~~~-~~~~ 270 (359)
.+.........+.+.++++. +++...++.+..|+........ ........+....+++.+.+ ++.+...+. ...
T Consensus 225 ~~~~h~~~~~~~~~~~~g~~-l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~- 302 (420)
T 4gga_A 225 TLSGHSQEVCGLRWAPDGRH-LASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH- 302 (420)
T ss_dssp EEECCSSCEEEEEECTTSSE-EEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCE-
T ss_pred EecccccceeeeeecCCCCe-eeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCE-
Confidence 33444455678899999985 4555567889999976543221 11121222223456777754 455433221 111
Q ss_pred ccccccCC-ccceeeecCCccceeeeeeccccc----------CcceEEEEEC-CCCCEEEEEEccCCceeeceEEEEEe
Q 018242 271 SKLVLSFP-WIGNVLIKLPIDIVKIHSSLVKLS----------GNGGMAMRIS-EQGNVLEILEEIGRKMWRSISEVEEK 338 (359)
Q Consensus 271 ~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~ 338 (359)
+..++ ..++....+..... +..+.+... .+ +.+..+| +.+..+..+..+. ..+..+...
T Consensus 303 ---I~iwd~~t~~~~~~~~~~~~-v~~~~~~~~~~~lv~~sg~~d-~~I~iwd~~~~~~v~~l~gH~----~~V~~l~~s 373 (420)
T 4gga_A 303 ---IRIWNVCSGACLSAVDAHSQ-VCSILWSPHYKELISGHGFAQ-NQLVIWKYPTMAKVAELKGHT----SRVLSLTMS 373 (420)
T ss_dssp ---EEEEETTTTEEEEEEECSSC-EEEEEEETTTTEEEEEECTTT-CCEEEEETTTCCEEEEECCCS----SCEEEEEEC
T ss_pred ---EEEEeCCccccceeeccccc-eeeeeecCCCCeEEEEEecCC-CEEEEEECCCCcEEEEEcCCC----CCEEEEEEc
Confidence 44443 35555554443322 222222211 11 2333344 3345555554322 234455444
Q ss_pred -CCEEEEecCCCCeEEEEcC
Q 018242 339 -DGNLWIGSVNMPYAGLYNY 357 (359)
Q Consensus 339 -~g~l~ig~~~~~~l~~~~~ 357 (359)
+|+..+++-.+..|.+-++
T Consensus 374 pdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 374 PDGATVASAAADETLRLWRC 393 (420)
T ss_dssp TTSSCEEEEETTTEEEEECC
T ss_pred CCCCEEEEEecCCeEEEEEC
Confidence 5555555444666777665
No 249
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.57 E-value=1.9e-05 Score=73.32 Aligned_cols=166 Identities=10% Similarity=0.018 Sum_probs=99.7
Q ss_pred CCCCceEEEccCCCeeEEecCCCEEEEEEcCCc-ceE-EEeecCCCCCCCCCCcccccccccccCCcceEEEEecCC-Ce
Q 018242 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQR-RWL-HFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTN-GD 109 (359)
Q Consensus 33 ~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~-g~ 109 (359)
-....+++++++|+.+.++ .++.|..||..+. +.. .+...+ ..+.........+++++++ ..
T Consensus 177 ~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~--------------~~~~~~~~~v~~~~~~p~~~~~ 241 (447)
T 3dw8_B 177 TYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKP--------------ANMEELTEVITAAEFHPNSCNT 241 (447)
T ss_dssp SSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCC--------------SSGGGCCCCEEEEEECSSCTTE
T ss_pred CcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeeccc--------------ccccccCcceEEEEECCCCCcE
Confidence 3456799999999967776 7899999999843 111 111000 0122233446789999944 34
Q ss_pred EEEEeCCCcEEEEeCCCCeE-----EEEeecCCCc-------cccccceEEEeCCCCEEEEEeCCCccccccceeeeeec
Q 018242 110 LYIADAYFGLLKVGPEGGLA-----TAVATQSEGI-------PFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSG 177 (359)
Q Consensus 110 l~v~~~~~~i~~~~~~~~~~-----~~~~~~~~~~-------~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~ 177 (359)
++.+...+.|..+|..+++. ..+....... ....+..++++|+|+ +.++-
T Consensus 242 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~----------------- 303 (447)
T 3dw8_B 242 FVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTR----------------- 303 (447)
T ss_dssp EEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEE-----------------
T ss_pred EEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEe-----------------
Confidence 44455555688999887663 3222110000 001577899999999 44441
Q ss_pred CCCceEEEEeCCC-CcEE-EEeCCCC--C-------------CceEEEccCCCEEEEEecCCCEEEEEEcCCC
Q 018242 178 DKTGRLMKYDPAT-KQVT-VLLGNLS--F-------------PNGVALSEDGNYILLAETTSCRILRYWLKTS 233 (359)
Q Consensus 178 ~~~g~v~~~d~~~-~~~~-~~~~~~~--~-------------p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~ 233 (359)
.. +.|..||..+ ++.. .+..... . ...++++|+++.+ ++...++.|..|++...
T Consensus 304 ~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l-~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 304 DY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVV-MTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp ES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE-EEECSTTEEEEEETTTC
T ss_pred eC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEE-EEeccCCEEEEEEcCCC
Confidence 22 5788888864 3321 2211110 0 1238999999865 66778899999998654
No 250
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.55 E-value=2.7e-05 Score=69.01 Aligned_cols=178 Identities=8% Similarity=0.092 Sum_probs=105.4
Q ss_pred CCCeeEEec--CCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC-----
Q 018242 44 LGEGPYTGV--SDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY----- 116 (359)
Q Consensus 44 ~G~~l~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~----- 116 (359)
+|..+|.+. .+++|++.+.++...+.+. . ..+..| .++++.||.+...
T Consensus 24 ~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~---------------------~--~~~~~i--~~~g~~Iyy~~~~~~~~~ 78 (302)
T 3s25_A 24 SDGEVFFSNTNDNGRLYAMNIDGSNIHKLS---------------------N--DTAMYI--NADKNYVYYVRNNNQKIT 78 (302)
T ss_dssp ETTEEEEEEGGGTTEEEEEETTSCSCEEEE---------------------E--EEEEEE--EECSSEEEEEEECC----
T ss_pred eCCEEEEEeCCCCceEEEEcCCCCCCEEcc---------------------C--CceeeE--EEcCCEEEEEECCCCccc
Confidence 444355543 2579999999876444332 1 112333 4447788877532
Q ss_pred ---------CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEe
Q 018242 117 ---------FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYD 187 (359)
Q Consensus 117 ---------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 187 (359)
..|++++.++++.+.+... .+..+.++|++||+++.. ......|++++
T Consensus 79 ~~~~~~~n~~~Iy~i~~dg~~~~~l~~~---------~~~~~s~~g~~Iy~~~~~--------------~~~~~~Iy~~~ 135 (302)
T 3s25_A 79 SQTFFSYDRNSLCRIKRNGHGSTVLDPD---------PCIYASLIGNYIYYLHYD--------------TQTATSLYRIR 135 (302)
T ss_dssp --CCSSCCSEEEEEEETTSCCCEEEECS---------CEEEEEEETTEEEEEEES--------------SSSCEEEEEEE
T ss_pred ccceeccCCCeEEEEeCCCCcceEeecC---------CccEEEEeCCEEEEEeec--------------CCCCceEEEEE
Confidence 2599999998875554321 123566677779998610 01234799999
Q ss_pred CCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCC-CEEEEEecC
Q 018242 188 PATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRG-GFWVGIHSR 266 (359)
Q Consensus 188 ~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G-~lwv~~~~~ 266 (359)
.++...+.+..... .+++++++.|||++....+|++.++++.. .+.+.. + +..+.++|+| .|+.+.+..
T Consensus 136 ~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~---~~~l~~--~-~~~~~~~P~g~~iy~t~~~~ 205 (302)
T 3s25_A 136 IDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQS---EALFYD--C-NCYKPVVLDDTNVYYMDVNR 205 (302)
T ss_dssp TTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTE---EEEEEC--S-CEEEEEEEETTEEEEEEGGG
T ss_pred CCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCC---EEEEeC--C-CccceeeecCCEEEEEEcCC
Confidence 98666555544322 45678999999998878899999986542 222222 1 2234455554 577777654
Q ss_pred CCccccccccCCcccee
Q 018242 267 RKGISKLVLSFPWIGNV 283 (359)
Q Consensus 267 ~~~~~~~~~~~~~~g~~ 283 (359)
+.. +.+.+.+|.-
T Consensus 206 ~~~----I~~~~ldG~~ 218 (302)
T 3s25_A 206 DNA----IVHVNINNPN 218 (302)
T ss_dssp TTE----EEEECSSSCC
T ss_pred CcE----EEEEECCCCC
Confidence 322 4444444443
No 251
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.55 E-value=1.5e-05 Score=70.26 Aligned_cols=190 Identities=12% Similarity=0.124 Sum_probs=109.8
Q ss_pred ceEEEcc--CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCC-Ce-EEE
Q 018242 37 ESLAFDA--LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTN-GD-LYI 112 (359)
Q Consensus 37 ~~i~~~~--~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~-g~-l~v 112 (359)
.++++.+ +|+++.++..++.|..||..++++.... .+.........++++++. +. |..
T Consensus 57 ~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~------------------~~~~h~~~v~~v~~~p~~~g~~l~s 118 (297)
T 2pm7_B 57 WRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIA------------------VHAVHSASVNSVQWAPHEYGPMLLV 118 (297)
T ss_dssp EEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCE------------------EECCCSSCEEEEEECCGGGCSEEEE
T ss_pred EEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEE------------------EeecCCCceeEEEeCcCCCCcEEEE
Confidence 3678865 4887888899999999999865322110 111222345678898842 44 444
Q ss_pred EeCCCcEEEEeCCCCe-E--EEEeecCCCccccccceEEEeCC-------------CCEEEEEeCCCccccccceeeeee
Q 018242 113 ADAYFGLLKVGPEGGL-A--TAVATQSEGIPFRFCNSLDIDQS-------------TGIIYFTDSSSQFQRRNHISVILS 176 (359)
Q Consensus 113 ~~~~~~i~~~~~~~~~-~--~~~~~~~~~~~~~~~~~l~~d~~-------------g~~l~v~d~~~~~~~~~~~~~~~~ 176 (359)
+...+.|..++..++. . ..+.. ....++.+.++|+ ++ ++++
T Consensus 119 ~s~d~~v~~wd~~~~~~~~~~~~~~-----h~~~v~~~~~~p~~~~~~~~~~~~~~~~-~l~s----------------- 175 (297)
T 2pm7_B 119 ASSDGKVSVVEFKENGTTSPIIIDA-----HAIGVNSASWAPATIEEDGEHNGTKESR-KFVT----------------- 175 (297)
T ss_dssp EETTSEEEEEEBCSSSCBCCEEEEC-----CSSCEEEEEECCCC------------CC-EEEE-----------------
T ss_pred EECCCcEEEEEecCCCceeeeeeec-----ccCccceEeecCCcccccccCCCCCCcc-eEEE-----------------
Confidence 5545557788876542 1 11111 1124567778776 34 3333
Q ss_pred cCCCceEEEEeCCCCc----EE-EEeCCCCCCceEEEccCC--CEEEEEecCCCEEEEEEcCCCCCcce-eEee--cCCC
Q 018242 177 GDKTGRLMKYDPATKQ----VT-VLLGNLSFPNGVALSEDG--NYILLAETTSCRILRYWLKTSKAGTI-EIVA--QLPG 246 (359)
Q Consensus 177 ~~~~g~v~~~d~~~~~----~~-~~~~~~~~p~gia~~~d~--~~l~v~~~~~~~i~~~~~~~~~~~~~-~~~~--~~~~ 246 (359)
++..+.|..||..++. .. .+..+......++|+|++ ..++++.+.++.|..|++........ ..+. ..+.
T Consensus 176 gs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~ 255 (297)
T 2pm7_B 176 GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPD 255 (297)
T ss_dssp EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSS
T ss_pred EcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCC
Confidence 1234567667655433 21 233334456899999985 34677888889999999865321111 1111 1222
Q ss_pred CCCceEECCCCCEEEEEecCC
Q 018242 247 FPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 247 ~p~~i~~d~~G~lwv~~~~~~ 267 (359)
....++++++|++.++....+
T Consensus 256 ~v~~~~~s~~g~~las~~~D~ 276 (297)
T 2pm7_B 256 VLWRASWSLSGNVLALSGGDN 276 (297)
T ss_dssp CEEEEEECSSSCCEEEEETTS
T ss_pred cEEEEEECCCCCEEEEEcCCC
Confidence 334578899998766555444
No 252
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.54 E-value=1.3e-05 Score=74.47 Aligned_cols=171 Identities=9% Similarity=0.075 Sum_probs=99.9
Q ss_pred EEEEeeCCCCCCceEEEcc-CCCeeEEecCCCEEEEEEcCC---cceEEEeecCCCCCCCCCCcccccccccccCCcceE
Q 018242 25 VVQYQIEGAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQ---RRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLG 100 (359)
Q Consensus 25 ~~~~~~~~~~~p~~i~~~~-~G~~l~~~~~~~~i~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g 100 (359)
+..+..+--..-.++++.+ +|.+++++..++.|..||..+ +.... ..... ........
T Consensus 55 ~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-----------------~~~~~-~h~~~v~~ 116 (437)
T 3gre_A 55 IATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYS-----------------SSLTY-DCSSTVTQ 116 (437)
T ss_dssp EEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCS-----------------CSEEE-ECSSCEEE
T ss_pred EeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccc-----------------eeeec-cCCCCEEE
Confidence 3344333335667999999 999888899999999999865 21000 00011 12344678
Q ss_pred EEEecCCCeEEEEeCCCcEEEEeCC---CCeEEEEee-c------CCCc-cccccceEE--EeCCCCEEEEEeCCCcccc
Q 018242 101 LCFNKTNGDLYIADAYFGLLKVGPE---GGLATAVAT-Q------SEGI-PFRFCNSLD--IDQSTGIIYFTDSSSQFQR 167 (359)
Q Consensus 101 i~~~~~~g~l~v~~~~~~i~~~~~~---~~~~~~~~~-~------~~~~-~~~~~~~l~--~d~~g~~l~v~d~~~~~~~ 167 (359)
+++++++..++.+...+.|..++.+ +++...... . .... ....+..+. ..++++.+..+
T Consensus 117 ~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------- 188 (437)
T 3gre_A 117 ITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL-------- 188 (437)
T ss_dssp EEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE--------
T ss_pred EEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE--------
Confidence 9999844445555555557777763 332221111 0 0000 011222333 44677733333
Q ss_pred ccceeeeeecCCCceEEEEeCCCCcEEEEe-C--CCCCCceEEEccCCCEEEEEecCCCEEEEEEcCC
Q 018242 168 RNHISVILSGDKTGRLMKYDPATKQVTVLL-G--NLSFPNGVALSEDGNYILLAETTSCRILRYWLKT 232 (359)
Q Consensus 168 ~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~--~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~ 232 (359)
...+.|..||..+++..... . .......++++|+++. +++...++.|..||+..
T Consensus 189 ----------~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~~~dg~i~iwd~~~ 245 (437)
T 3gre_A 189 ----------TNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCV-LILGTTRGIIDIWDIRF 245 (437)
T ss_dssp ----------ETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCE-EEEEETTSCEEEEETTT
T ss_pred ----------eCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCE-EEEEcCCCeEEEEEcCC
Confidence 33568999999877654433 2 2345688999999885 55556778999999864
No 253
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.54 E-value=2.9e-05 Score=77.23 Aligned_cols=214 Identities=12% Similarity=0.084 Sum_probs=120.0
Q ss_pred ceEEEccCCCeeEEecC-CC----EEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEE
Q 018242 37 ESLAFDALGEGPYTGVS-DG----RIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLY 111 (359)
Q Consensus 37 ~~i~~~~~G~~l~~~~~-~~----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~ 111 (359)
.+++++|||+.+..+.. .| .|+.+|..+++..... ... ....++++++++..|+
T Consensus 128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~-------------------~~~--~~~~~~~wspDg~~l~ 186 (710)
T 2xdw_A 128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-------------------LER--VKFSCMAWTHDGKGMF 186 (710)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-------------------EEE--ECSCCEEECTTSSEEE
T ss_pred EEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccc-------------------ccC--cccceEEEEeCCCEEE
Confidence 36889999986654433 22 8999999988554321 111 1134688999556677
Q ss_pred EEeCCCc----------------EEEEeCCCCeEE--EEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceee
Q 018242 112 IADAYFG----------------LLKVGPEGGLAT--AVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISV 173 (359)
Q Consensus 112 v~~~~~~----------------i~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~ 173 (359)
++..... |++++..+++.+ .+... .. ......++.++|||++|+++....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~-~~-~~~~~~~~~~SpDg~~l~~~~~~~---------- 254 (710)
T 2xdw_A 187 YNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEF-PD-EPKWMGGAELSDDGRYVLLSIREG---------- 254 (710)
T ss_dssp EEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECC-TT-CTTCEEEEEECTTSCEEEEEEECS----------
T ss_pred EEEECCccccccccccccCCCCEEEEEECCCCcccceEEecc-CC-CCeEEEEEEEcCCCCEEEEEEEcc----------
Confidence 7654322 888888776521 22121 11 112345789999999777663210
Q ss_pred eeecCCCceEEEEeCCC------C--cEEEEeCCCCCCceEEEccCCCEEEEEecCC---CEEEEEEcCCCCCcceeEee
Q 018242 174 ILSGDKTGRLMKYDPAT------K--QVTVLLGNLSFPNGVALSEDGNYILLAETTS---CRILRYWLKTSKAGTIEIVA 242 (359)
Q Consensus 174 ~~~~~~~g~v~~~d~~~------~--~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~---~~i~~~~~~~~~~~~~~~~~ 242 (359)
......|+.+|.++ + ..+.+...... ....+++||+.+|+....+ ..|++++++.......+.+.
T Consensus 255 ---~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 255 ---CDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG-EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp ---SSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS-CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred ---CCCccEEEEEECcccccccCCccceEEeeCCCCc-EEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc
Confidence 01135788898765 4 34444433222 2335788999888776543 47999998654221223332
Q ss_pred c-CC-CCCCceEECCCCCEEEEEecCCCccccccccCCc-cceeeecCCcc
Q 018242 243 Q-LP-GFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFPW-IGNVLIKLPID 290 (359)
Q Consensus 243 ~-~~-~~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~ 290 (359)
. .. ....++.+.+++.++++....+. ..+..++. +|+.+..++.+
T Consensus 331 ~~~~~~~~~~~~~~~~~~lv~~~~~~g~---~~l~~~~~~~g~~~~~l~~~ 378 (710)
T 2xdw_A 331 PEHEKDVLEWVACVRSNFLVLCYLHDVK---NTLQLHDLATGALLKIFPLE 378 (710)
T ss_dssp CCCSSCEEEEEEEETTTEEEEEEEETTE---EEEEEEETTTCCEEEEECCC
T ss_pred CCCCCCeEEEEEEEcCCEEEEEEEECCE---EEEEEEECCCCCEEEecCCC
Confidence 2 22 12345666556667766554432 11444444 56665555554
No 254
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.51 E-value=1.5e-05 Score=83.03 Aligned_cols=187 Identities=12% Similarity=0.068 Sum_probs=114.1
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEe-cCCCeEEEEe
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFN-KTNGDLYIAD 114 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~-~~~g~l~v~~ 114 (359)
...++++|||+.+..+ .++.|+.||..+.....+... ... .. .........+..++++ |++..|.++.
T Consensus 247 ~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l~~l~~~--~~~-----~~---~~~~~~~~~v~~~~~S~pdG~~la~~~ 315 (1045)
T 1k32_A 247 YYPRHLNTDGRRILFS-KGGSIYIFNPDTEKIEKIEIG--DLE-----SP---EDRIISIPSKFAEDFSPLDGDLIAFVS 315 (1045)
T ss_dssp SCEEEEEESSSCEEEE-ETTEEEEECTTTCCEEECCCC--CCC-----BC---CSEEEECGGGGEEEEEECGGGCEEEEE
T ss_pred cceeeEcCCCCEEEEE-eCCEEEEecCCceEeeeeccC--ccc-----cc---ccccccccccceeeecCCCCCEEEEEE
Confidence 3467889999844444 578999999865543322100 000 00 0001112235689999 9444465555
Q ss_pred CCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEE-EEeCCCCcE
Q 018242 115 AYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLM-KYDPATKQV 193 (359)
Q Consensus 115 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~-~~d~~~~~~ 193 (359)
...|+.++..+++...+.. .....+..++++ +|++++++.. ...++ .++.++++.
T Consensus 316 -~~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~s-dg~~l~~~s~------------------~~~l~~~~d~~~~~~ 371 (1045)
T 1k32_A 316 -RGQAFIQDVSGTYVLKVPE----PLRIRYVRRGGD-TKVAFIHGTR------------------EGDFLGIYDYRTGKA 371 (1045)
T ss_dssp -TTEEEEECTTSSBEEECSC----CSCEEEEEECSS-SEEEEEEEET------------------TEEEEEEEETTTCCE
T ss_pred -cCEEEEEcCCCCceEEccC----CCcceEEeeeEc-CCCeEEEEEC------------------CCceEEEEECCCCCc
Confidence 5568889988877554321 111145677888 8875665521 34788 889887776
Q ss_pred EEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEee-cCCCCCCceEECCCCCEEE
Q 018242 194 TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA-QLPGFPDNIKRSPRGGFWV 261 (359)
Q Consensus 194 ~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~p~~i~~d~~G~lwv 261 (359)
..+......+..++++|||+.++++. ..+.|+.|++...+ ..... ...+....++++++|+..+
T Consensus 372 ~~l~~~~~~~~~~~~SpDG~~la~~~-~~~~v~~~d~~tg~---~~~~~~~~~~~v~~~~~SpDG~~la 436 (1045)
T 1k32_A 372 EKFEENLGNVFAMGVDRNGKFAVVAN-DRFEIMTVDLETGK---PTVIERSREAMITDFTISDNSRFIA 436 (1045)
T ss_dssp EECCCCCCSEEEEEECTTSSEEEEEE-TTSEEEEEETTTCC---EEEEEECSSSCCCCEEECTTSCEEE
T ss_pred eEecCCccceeeeEECCCCCEEEEEC-CCCeEEEEECCCCc---eEEeccCCCCCccceEECCCCCeEE
Confidence 65543334567899999999776665 55799999986542 22222 2333347799999998544
No 255
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.50 E-value=4.2e-05 Score=69.76 Aligned_cols=218 Identities=9% Similarity=0.048 Sum_probs=121.1
Q ss_pred CCceEEEcc-CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCC--C-eE
Q 018242 35 GPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTN--G-DL 110 (359)
Q Consensus 35 ~p~~i~~~~-~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~--g-~l 110 (359)
...++++.+ ++.+++++..++.|..||..+.+..... ........+.+.+.. + .+
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~ 159 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVF---------------------NFEETVYSHHMSPVSTKHCLV 159 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEE---------------------ECSSCEEEEEECSSCSSCCEE
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceec---------------------cCCCceeeeEeecCCCCCcEE
Confidence 456888998 6776778888899999999876433211 112234456666532 2 45
Q ss_pred EEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCC
Q 018242 111 YIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPAT 190 (359)
Q Consensus 111 ~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 190 (359)
+++...+.|..++..+++....... ....+..++++|++++++++- ...+.|..||..+
T Consensus 160 ~~~~~~~~v~~~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~ll~~~-----------------~~dg~i~i~d~~~ 218 (408)
T 4a11_B 160 AVGTRGPKVQLCDLKSGSCSHILQG----HRQEILAVSWSPRYDYILATA-----------------SADSRVKLWDVRR 218 (408)
T ss_dssp EEEESSSSEEEEESSSSCCCEEECC----CCSCEEEEEECSSCTTEEEEE-----------------ETTSCEEEEETTC
T ss_pred EEEcCCCeEEEEeCCCcceeeeecC----CCCcEEEEEECCCCCcEEEEE-----------------cCCCcEEEEECCC
Confidence 5555555688999887654322211 123567899999998545441 2345688888764
Q ss_pred Cc--EEEE---------------eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCC----CCCC
Q 018242 191 KQ--VTVL---------------LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLP----GFPD 249 (359)
Q Consensus 191 ~~--~~~~---------------~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~p~ 249 (359)
+. ...+ .........++++|+++.++.+ ..++.|..|++............... ....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 297 (408)
T 4a11_B 219 ASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTV-GTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKF 297 (408)
T ss_dssp SSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCC
T ss_pred CCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEe-cCCCeEEEEECCCCccceecccccccccccccee
Confidence 42 1111 1112234688999999865554 56678999998654321110000001 1111
Q ss_pred ceEECCCCCEEEEEecCCCccccccccCC-ccceeeecCCccceeeeeecccc
Q 018242 250 NIKRSPRGGFWVGIHSRRKGISKLVLSFP-WIGNVLIKLPIDIVKIHSSLVKL 301 (359)
Q Consensus 250 ~i~~d~~G~lwv~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~ 301 (359)
....+..+.+.++..++. +..++ ..++.+..+..+...+..+.+..
T Consensus 298 ~~~~~~~~~~~~~~~~~~------i~v~d~~~~~~~~~~~~~~~~v~~~~~s~ 344 (408)
T 4a11_B 298 TVSCGCSSEFVFVPYGST------IAVYTVYSGEQITMLKGHYKTVDCCVFQS 344 (408)
T ss_dssp EECCSSSSCEEEEEETTE------EEEEETTTCCEEEEECCCSSCEEEEEEET
T ss_pred EEecCCCceEEEEecCCE------EEEEECcCCcceeeeccCCCeEEEEEEcC
Confidence 122233445555554433 45554 35666666554444444444443
No 256
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.50 E-value=7.3e-05 Score=67.18 Aligned_cols=184 Identities=8% Similarity=-0.060 Sum_probs=112.4
Q ss_pred cCCCeeEEecCCCEEEEEEcCCcceE-EEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCCCcEEE
Q 018242 43 ALGEGPYTGVSDGRIIKWHQDQRRWL-HFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYFGLLK 121 (359)
Q Consensus 43 ~~G~~l~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~~~i~~ 121 (359)
+++.+++++..++.|..||..+++.. .+... ........|. ++-...++.+.+-+....+..
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~----------------~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~ 108 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTITTP----------------NPRTGGEHPA-IISRGPCNRLLLLYPGNQITI 108 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEEEE----------------CCCTTCCCCS-EEEECSTTEEEEEETTTEEEE
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEecC----------------CceeeeeCCc-eEEecCCCeEEEEEccCceEE
Confidence 46777889999999999999876432 22100 1111112233 333333777777766666777
Q ss_pred EeCCCCeEEEEeecCCCccccccceEEEeC--CCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEe--
Q 018242 122 VGPEGGLATAVATQSEGIPFRFCNSLDIDQ--STGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLL-- 197 (359)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~--~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-- 197 (359)
++..+++........ ....+..++++| +++ ++++- +..+.|..||..+++.....
T Consensus 109 ~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~-~l~s~-----------------s~dg~i~~wd~~~~~~~~~~~~ 167 (343)
T 3lrv_A 109 LDSKTNKVLREIEVD---SANEIIYMYGHNEVNTE-YFIWA-----------------DNRGTIGFQSYEDDSQYIVHSA 167 (343)
T ss_dssp EETTTCCEEEEEECC---CSSCEEEEECCC---CC-EEEEE-----------------ETTCCEEEEESSSSCEEEEECC
T ss_pred eecCCcceeEEeecC---CCCCEEEEEcCCCCCCC-EEEEE-----------------eCCCcEEEEECCCCcEEEEEec
Confidence 888777632221111 112467889999 998 55541 23567899998877764433
Q ss_pred CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-CCCCCCceEECCCCCEEEEEecC
Q 018242 198 GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGGFWVGIHSR 266 (359)
Q Consensus 198 ~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwv~~~~~ 266 (359)
........++++||++ ++++...++.|..||+....... ..+.. ..+....++++++|++.++...+
T Consensus 168 ~~~~~i~~~~~~pdg~-~lasg~~dg~i~iwd~~~~~~~~-~~~~~~h~~~v~~l~fs~~g~~l~s~~~~ 235 (343)
T 3lrv_A 168 KSDVEYSSGVLHKDSL-LLALYSPDGILDVYNLSSPDQAS-SRFPVDEEAKIKEVKFADNGYWMVVECDQ 235 (343)
T ss_dssp CSSCCCCEEEECTTSC-EEEEECTTSCEEEEESSCTTSCC-EECCCCTTSCEEEEEECTTSSEEEEEESS
T ss_pred CCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCCCCc-cEEeccCCCCEEEEEEeCCCCEEEEEeCC
Confidence 2223467899999998 56666778899999987543210 12222 22334668999999877655544
No 257
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.49 E-value=0.00033 Score=65.18 Aligned_cols=258 Identities=11% Similarity=0.073 Sum_probs=138.2
Q ss_pred EEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCCCcE
Q 018242 40 AFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYFGL 119 (359)
Q Consensus 40 ~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~~~i 119 (359)
++..+|+.++++..++.|..||..+++... .+.........+.++ ++.++.+...+.|
T Consensus 124 ~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~--------------------~~~~h~~~v~~~~~~--~~~l~s~~~dg~i 181 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLR--------------------TLVGHTGGVWSSQMR--DNIIISGSTDRTL 181 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTCCEEE--------------------ECCCCSSCEEEEEEE--TTEEEEEETTSCE
T ss_pred EEEEcCCEEEEEECCCcEEEEECCCCcEEE--------------------EEcCCCCCEEEEEec--CCEEEEEeCCCeE
Confidence 455568878899999999999998764322 122222335567776 4566666666669
Q ss_pred EEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEE-eC
Q 018242 120 LKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVL-LG 198 (359)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~-~~ 198 (359)
..++.++++....... ....+..+.++ ++.+..+ +..+.|..+|..+++.... ..
T Consensus 182 ~vwd~~~~~~~~~~~~----h~~~v~~~~~~--~~~l~s~------------------s~dg~i~~wd~~~~~~~~~~~~ 237 (445)
T 2ovr_B 182 KVWNAETGECIHTLYG----HTSTVRCMHLH--EKRVVSG------------------SRDATLRVWDIETGQCLHVLMG 237 (445)
T ss_dssp EEEETTTTEEEEEECC----CSSCEEEEEEE--TTEEEEE------------------ETTSEEEEEESSSCCEEEEEEC
T ss_pred EEEECCcCcEEEEECC----CCCcEEEEEec--CCEEEEE------------------eCCCEEEEEECCCCcEEEEEcC
Confidence 9999988865432221 11244566665 4424444 2356799999887665433 33
Q ss_pred CCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCCCccccccccCC
Q 018242 199 NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFP 278 (359)
Q Consensus 199 ~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~ 278 (359)
.......+++ +++. +++...++.|..|++.... ....+.........+.+ +|+..++....+. +..++
T Consensus 238 ~~~~v~~~~~--~~~~-l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~-----i~i~d 305 (445)
T 2ovr_B 238 HVAAVRCVQY--DGRR-VVSGAYDFMVKVWDPETET--CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS-----IRVWD 305 (445)
T ss_dssp CSSCEEEEEE--CSSC-EEEEETTSCEEEEEGGGTE--EEEEECCCSSCEEEEEE--CSSEEEEEETTSC-----EEEEE
T ss_pred CcccEEEEEE--CCCE-EEEEcCCCEEEEEECCCCc--EeEEecCCCCceEEEEE--CCCEEEEEeCCCe-----EEEEE
Confidence 3334456666 5664 5555677899999975431 11112111122334555 5655444444443 55554
Q ss_pred -ccceeeecCCccceeeeeeccc------ccCcceEEEEECC-CCCEEEEEEccCCceeeceEEEEEeCCEEEEecCCCC
Q 018242 279 -WIGNVLIKLPIDIVKIHSSLVK------LSGNGGMAMRISE-QGNVLEILEEIGRKMWRSISEVEEKDGNLWIGSVNMP 350 (359)
Q Consensus 279 -~~g~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~g~~~~~~~~~~g~~~~~~~~~~~~~g~l~ig~~~~~ 350 (359)
..++.+..+......+..+.+. +..+ +.+..+|. +++.+..+..+.+ ....+..+..++..|..|+ .+.
T Consensus 306 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~s~~-~dg 382 (445)
T 2ovr_B 306 VETGNCIHTLTGHQSLTSGMELKDNILVSGNAD-STVKIWDIKTGQCLQTLQGPNK-HQSAVTCLQFNKNFVITSS-DDG 382 (445)
T ss_dssp TTTCCEEEEECCCCSCEEEEEEETTEEEEEETT-SCEEEEETTTCCEEEEECSTTS-CSSCEEEEEECSSEEEEEE-TTS
T ss_pred CCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCC-CeEEEEECCCCcEEEEEccCCC-CCCCEEEEEECCCEEEEEe-CCC
Confidence 3556555544332222222221 1122 33444553 4555555543211 1234455555555555555 467
Q ss_pred eEEEEcCC
Q 018242 351 YAGLYNYS 358 (359)
Q Consensus 351 ~l~~~~~~ 358 (359)
.|.++++.
T Consensus 383 ~v~iwd~~ 390 (445)
T 2ovr_B 383 TVKLWDLK 390 (445)
T ss_dssp EEEEEETT
T ss_pred eEEEEECC
Confidence 78877764
No 258
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.48 E-value=0.00059 Score=63.66 Aligned_cols=190 Identities=12% Similarity=0.062 Sum_probs=106.0
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEec-CCCe-EE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNK-TNGD-LY 111 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~-~~g~-l~ 111 (359)
....++++.+++ .++++..++.|..||..+++... .+.........+.+.+ .++. ++
T Consensus 163 ~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~--------------------~~~~h~~~v~~l~~~~~~~~~~l~ 221 (464)
T 3v7d_B 163 GGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTH--------------------VFEGHNSTVRCLDIVEYKNIKYIV 221 (464)
T ss_dssp SCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEE--------------------EECCCSSCEEEEEEEESSSCEEEE
T ss_pred cCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEE--------------------EECCCCCccEEEEEecCCCCCEEE
Confidence 355688898888 58899999999999998764322 1222233456677764 1444 44
Q ss_pred EEeCCCcEEEEeCCCCeEEEEeecCCC-----------------ccccccceEEEeCCCCEEEEEeCCCccccccceeee
Q 018242 112 IADAYFGLLKVGPEGGLATAVATQSEG-----------------IPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVI 174 (359)
Q Consensus 112 v~~~~~~i~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~ 174 (359)
.+...+.|..++..++........... .......-..++++++++..+
T Consensus 222 s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~--------------- 286 (464)
T 3v7d_B 222 TGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSG--------------- 286 (464)
T ss_dssp EEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEE---------------
T ss_pred EEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEE---------------
Confidence 455555688888876542111000000 000011112345667734433
Q ss_pred eecCCCceEEEEeCCCCcEEEEe-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEE
Q 018242 175 LSGDKTGRLMKYDPATKQVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKR 253 (359)
Q Consensus 175 ~~~~~~g~v~~~d~~~~~~~~~~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~ 253 (359)
...+.|..+|..+++..... ........++++++++.+ ++...++.|..|++...+ ....+.........+.+
T Consensus 287 ---~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~sg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~ 360 (464)
T 3v7d_B 287 ---SYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRC-ISASMDTTIRIWDLENGE--LMYTLQGHTALVGLLRL 360 (464)
T ss_dssp ---ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEE-EEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEE
T ss_pred ---eCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEE-EEEeCCCcEEEEECCCCc--EEEEEeCCCCcEEEEEE
Confidence 23567999998876654433 334456789999999854 555677899999976432 11222222222345666
Q ss_pred CCCCCEEEEEecCC
Q 018242 254 SPRGGFWVGIHSRR 267 (359)
Q Consensus 254 d~~G~lwv~~~~~~ 267 (359)
+ ++..++....+
T Consensus 361 ~--~~~l~s~s~dg 372 (464)
T 3v7d_B 361 S--DKFLVSAAADG 372 (464)
T ss_dssp C--SSEEEEEETTS
T ss_pred c--CCEEEEEeCCC
Confidence 5 45444444433
No 259
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.47 E-value=6.5e-06 Score=78.64 Aligned_cols=149 Identities=12% Similarity=0.092 Sum_probs=98.7
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcCCcce--------EEEeecCCCCCCCCCCcccccccccccCCcceEEEEecC
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRW--------LHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKT 106 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~ 106 (359)
+-++++++|||++++++..+|.|..||..++.. ..+.. ...........++++|
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~-----------------~~~gh~~~V~sVawSP- 192 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRL-----------------SDAGSKDWVTHIVWYE- 192 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEEC-----------------SCTTCCCCEEEEEEET-
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeec-----------------ccccccccEEEEEEcC-
Confidence 356899999999999999999999999987632 22110 0011123467899999
Q ss_pred CCeEEEEeCCCcEEEEeCCCCeEE----EEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCce
Q 018242 107 NGDLYIADAYFGLLKVGPEGGLAT----AVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGR 182 (359)
Q Consensus 107 ~g~l~v~~~~~~i~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~ 182 (359)
+| +.++...+.+..++.++++.. .+.. . ....+.++++. |++|-.+ . .+.
T Consensus 193 dg-Laass~D~tVrlWd~~~~~~~~~~~tL~~-~---h~~~V~svaFs--g~~LASa------------------~-~~t 246 (588)
T 2j04_A 193 DV-LVAALSNNSVFSMTVSASSHQPVSRMIQN-A---SRRKITDLKIV--DYKVVLT------------------C-PGY 246 (588)
T ss_dssp TE-EEEEETTCCEEEECCCSSSSCCCEEEEEC-C---CSSCCCCEEEE--TTEEEEE------------------C-SSE
T ss_pred Cc-EEEEeCCCeEEEEECCCCccccceeeecc-c---ccCcEEEEEEE--CCEEEEE------------------e-CCe
Confidence 77 766666677999999877631 1211 1 12367888998 5624333 1 358
Q ss_pred EEEEeCCCCcEEEEe-CCCCCCceEEE--ccCCCEEEEEecCCCEEEEEE
Q 018242 183 LMKYDPATKQVTVLL-GNLSFPNGVAL--SEDGNYILLAETTSCRILRYW 229 (359)
Q Consensus 183 v~~~d~~~~~~~~~~-~~~~~p~gia~--~~d~~~l~v~~~~~~~i~~~~ 229 (359)
|..||.+++...... +......++++ +||++. +++...++. ..|.
T Consensus 247 IkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~-La~a~edG~-klw~ 294 (588)
T 2j04_A 247 VHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTI-LLMSNKTSY-KVLL 294 (588)
T ss_dssp EEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEE-EEECSSCEE-EEEE
T ss_pred EEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCE-EEEEcCCCC-EEEe
Confidence 999999887774544 55556789999 999864 444444555 4454
No 260
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.45 E-value=2e-05 Score=79.11 Aligned_cols=195 Identities=12% Similarity=0.066 Sum_probs=116.4
Q ss_pred CCceEEEccC--CCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecC--CCeE
Q 018242 35 GPESLAFDAL--GEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKT--NGDL 110 (359)
Q Consensus 35 ~p~~i~~~~~--G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~--~g~l 110 (359)
.-.++++.++ |+.++++..++.|..||..+++..... ...........++++++ +..+
T Consensus 55 ~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~------------------~~~~h~~~V~~v~~sp~~~~~~l 116 (753)
T 3jro_A 55 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIA------------------VHAVHSASVNSVQWAPHEYGPLL 116 (753)
T ss_dssp CEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEE------------------EECCCSSCEEEEEECCGGGCSEE
T ss_pred ceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccc------------------cccCCCCCeEEEEECCCCCCCEE
Confidence 3458889887 888889999999999999876433322 22223344678999985 3445
Q ss_pred EEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeC-------------CCCEEEEEeCCCccccccceeeeeec
Q 018242 111 YIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQ-------------STGIIYFTDSSSQFQRRNHISVILSG 177 (359)
Q Consensus 111 ~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~-------------~g~~l~v~d~~~~~~~~~~~~~~~~~ 177 (359)
+++...+.|..+|..++........ .. ....+..+.++| +++.+..+
T Consensus 117 ~sgs~dg~I~vwdl~~~~~~~~~~~-~~-~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sg------------------ 176 (753)
T 3jro_A 117 LVASSDGKVSVVEFKENGTTSPIII-DA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTG------------------ 176 (753)
T ss_dssp EEEETTSEEEEEECCSSSCCCCEEE-EC-CSSCEEEEEECCCC---------CGGGCCEEEE------------------
T ss_pred EEEeCCCcEEEEEeecCCCcceeEe-ec-CCCceEEEEecCcccccccccccCCCCCEEEEE------------------
Confidence 5555555688888876521111000 00 123566788888 46634443
Q ss_pred CCCceEEEEeCCCCc----EE-EEeCCCCCCceEEEccC---CCEEEEEecCCCEEEEEEcCCCCCcceeEeec---CCC
Q 018242 178 DKTGRLMKYDPATKQ----VT-VLLGNLSFPNGVALSED---GNYILLAETTSCRILRYWLKTSKAGTIEIVAQ---LPG 246 (359)
Q Consensus 178 ~~~g~v~~~d~~~~~----~~-~~~~~~~~p~gia~~~d---~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~ 246 (359)
...+.|..||..++. .. .+..+......++++|+ ++ .+++...++.|..|++............. ..+
T Consensus 177 s~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~-~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 255 (753)
T 3jro_A 177 GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPD 255 (753)
T ss_dssp ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSS
T ss_pred ECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCC-EEEEEecCCEEEEecCCCCCCcceeEEeccCCCCC
Confidence 224567777765442 11 12233445678999999 65 56666677899999987542211111111 223
Q ss_pred CCCceEECCCCCEEEEEecCCC
Q 018242 247 FPDNIKRSPRGGFWVGIHSRRK 268 (359)
Q Consensus 247 ~p~~i~~d~~G~lwv~~~~~~~ 268 (359)
....++++++|++.++....+.
T Consensus 256 ~v~~l~~spdg~~l~s~s~Dg~ 277 (753)
T 3jro_A 256 VLWRASWSLSGNVLALSGGDNK 277 (753)
T ss_dssp CCCCEEECTTTCCEEEECSSSC
T ss_pred ceEEEEEcCCCCEEEEEcCCCE
Confidence 4567899999976655444443
No 261
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.44 E-value=1.8e-05 Score=77.80 Aligned_cols=188 Identities=12% Similarity=0.032 Sum_probs=107.3
Q ss_pred cCCCe-eE-EecCCCEEEEEEcC--C-cceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC-
Q 018242 43 ALGEG-PY-TGVSDGRIIKWHQD--Q-RRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY- 116 (359)
Q Consensus 43 ~~G~~-l~-~~~~~~~i~~~d~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~- 116 (359)
|||+. ++ +...+..|+.++.+ + ++...+... ...........+++++++..|+++...
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~----------------~~~~~~~~~~~~~~spDg~~l~~~~~~~ 151 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPV----------------SAVGGGLRWADPVLLPERGEVWCMAEEF 151 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCC----------------CCSTTCEEEEEEEEETTTTEEEEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCC----------------ccCCCCccccCcEECCCCCEEEEEEecc
Confidence 88885 44 44446789999887 3 433322100 000012235678999955566665432
Q ss_pred ---------CcEEEEeCCC------CeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecC-CC
Q 018242 117 ---------FGLLKVGPEG------GLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGD-KT 180 (359)
Q Consensus 117 ---------~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~-~~ 180 (359)
..|++++.++ ++.+.+.. . .......++++|||++|+++...... .. ..
T Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~--~--~~~~~~~~~~SpDG~~la~~~~~~~~-----------~~~~~ 216 (662)
T 3azo_A 152 TGEGPSDVRRFLAAVPLDGSAAADRSAVRELSD--D--AHRFVTGPRLSPDGRQAVWLAWDHPR-----------MPWEG 216 (662)
T ss_dssp CSSSTTCEEEEEEEEETTSTTTTCGGGSEESSC--S--CSSEECCCEECTTSSEEEEEEECTTC-----------CTTTC
T ss_pred cCCCCCCceeEEEEEECCCCccccCCceeEEEe--c--CCCcccCceECCCCCEEEEEECCCCC-----------CCCCC
Confidence 2588999988 66554430 1 11345678999999977666321100 00 12
Q ss_pred ceEEEEeCC-CC---cEEEEeCC-CCCCceEEEccCCCEEEEEecCCC--EEEEEEcCCCCCcceeEeecCC-C------
Q 018242 181 GRLMKYDPA-TK---QVTVLLGN-LSFPNGVALSEDGNYILLAETTSC--RILRYWLKTSKAGTIEIVAQLP-G------ 246 (359)
Q Consensus 181 g~v~~~d~~-~~---~~~~~~~~-~~~p~gia~~~d~~~l~v~~~~~~--~i~~~~~~~~~~~~~~~~~~~~-~------ 246 (359)
..|+.+|.+ ++ +.+.+... ...+..++++|||+ +|++...++ .|+++++++.+ .+.+.... .
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~---~~~l~~~~~~~~~p~w 292 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGA---ATQLCRREEEFAGPLW 292 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCC---EEESSCCSSBSSCCCC
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCc---eeecccccccccCccc
Confidence 468999887 46 44444332 34567889999999 566555555 78888864432 11111100 0
Q ss_pred C--CCceEECCCCCEEEEEec
Q 018242 247 F--PDNIKRSPRGGFWVGIHS 265 (359)
Q Consensus 247 ~--p~~i~~d~~G~lwv~~~~ 265 (359)
. ...+++.++|++++....
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~ 313 (662)
T 3azo_A 293 TPGMRWFAPLANGLIAVVHGK 313 (662)
T ss_dssp STTCCSEEECTTSCEEEEEBS
T ss_pred cccCceEeEeCCCEEEEEEEc
Confidence 1 245777778887776554
No 262
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.44 E-value=5.3e-06 Score=80.48 Aligned_cols=175 Identities=17% Similarity=0.139 Sum_probs=108.4
Q ss_pred CCceEEEccCCC-eeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE-
Q 018242 35 GPESLAFDALGE-GPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI- 112 (359)
Q Consensus 35 ~p~~i~~~~~G~-~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v- 112 (359)
.....++.++|+ +++++...+.+..||.++++.+.+.. .. . ..++++| +|+.++
T Consensus 111 ~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~--------------------~~-~--~~~~~sp-DG~~la~ 166 (582)
T 3o4h_A 111 PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR--------------------LP-G--FGFVSDI-RGDLIAG 166 (582)
T ss_dssp SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE--------------------ES-S--CEEEEEE-ETTEEEE
T ss_pred CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec--------------------CC-C--ceEEECC-CCCEEEE
Confidence 344567777775 35666666667789988875544321 11 1 5788999 555444
Q ss_pred EeCC----CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeC
Q 018242 113 ADAY----FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDP 188 (359)
Q Consensus 113 ~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 188 (359)
+... ..|+++|.++++.+.+... ......++++|||++|+.++. .....|+++|.
T Consensus 167 ~~~~~~~~~~i~~~d~~~g~~~~l~~~-----~~~~~~~~~SpDG~~l~~~~~----------------~~~~~i~~~d~ 225 (582)
T 3o4h_A 167 LGFFGGGRVSLFTSNLSSGGLRVFDSG-----EGSFSSASISPGMKVTAGLET----------------AREARLVTVDP 225 (582)
T ss_dssp EEEEETTEEEEEEEETTTCCCEEECCS-----SCEEEEEEECTTSCEEEEEEC----------------SSCEEEEEECT
T ss_pred EEEcCCCCeEEEEEcCCCCCceEeecC-----CCccccceECCCCCEEEEccC----------------CCeeEEEEEcC
Confidence 3322 2489999988887655321 124578899999996664422 11237999999
Q ss_pred CCCcEEEEeCC-CCCCceEE--------EccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCE
Q 018242 189 ATKQVTVLLGN-LSFPNGVA--------LSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGF 259 (359)
Q Consensus 189 ~~~~~~~~~~~-~~~p~gia--------~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l 259 (359)
++++.+ .... ...+..++ ++||| .++++...++.+..|++ +. .. ....+....++++ +|++
T Consensus 226 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~-g~----~~--~~~~~~v~~~~~s-dg~~ 295 (582)
T 3o4h_A 226 RDGSVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID-GE----RV--EAPQGNHGRVVLW-RGKL 295 (582)
T ss_dssp TTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET-TE----EE--CCCSSEEEEEEEE-TTEE
T ss_pred CCCcEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE-CC----ee--ccCCCceEEEEec-CCEE
Confidence 988877 3322 22234455 99999 57777777888999987 21 11 1122223457787 8876
Q ss_pred EEEEe
Q 018242 260 WVGIH 264 (359)
Q Consensus 260 wv~~~ 264 (359)
++...
T Consensus 296 l~~~s 300 (582)
T 3o4h_A 296 VTSHT 300 (582)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 65433
No 263
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.44 E-value=4.6e-05 Score=67.48 Aligned_cols=163 Identities=9% Similarity=0.005 Sum_probs=98.7
Q ss_pred CCCceEEEcc--CCCeeEEecCCCEEEEEEcCCcce-------EEEeecCCCCCCCCCCcccccccccccCCcceEEEEe
Q 018242 34 IGPESLAFDA--LGEGPYTGVSDGRIIKWHQDQRRW-------LHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFN 104 (359)
Q Consensus 34 ~~p~~i~~~~--~G~~l~~~~~~~~i~~~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~ 104 (359)
....++++.+ ++++++++..++.|..||..+++. .... .+.........++++
T Consensus 58 ~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~------------------~~~~~~~~v~~~~~~ 119 (351)
T 3f3f_A 58 SSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLC------------------TLNDSKGSLYSVKFA 119 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEE------------------EECCCSSCEEEEEEC
T ss_pred CcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceee------------------eecccCCceeEEEEc
Confidence 3456889988 588788889999999999876521 1110 222233446789999
Q ss_pred cC--CCeEEEEeCCCcEEEEeCCCCeEE------EEeec---CCCccccccceEEEeCC---CCEEEEEeCCCccccccc
Q 018242 105 KT--NGDLYIADAYFGLLKVGPEGGLAT------AVATQ---SEGIPFRFCNSLDIDQS---TGIIYFTDSSSQFQRRNH 170 (359)
Q Consensus 105 ~~--~g~l~v~~~~~~i~~~~~~~~~~~------~~~~~---~~~~~~~~~~~l~~d~~---g~~l~v~d~~~~~~~~~~ 170 (359)
++ +..++.+...+.|..+|..+++.. ..... ........+..+.++|+ ++.+.++.
T Consensus 120 ~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~---------- 189 (351)
T 3f3f_A 120 PAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSA---------- 189 (351)
T ss_dssp CGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEE----------
T ss_pred CCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEec----------
Confidence 85 344555555556888887765421 00000 11112345677888886 77344442
Q ss_pred eeeeeecCCCceEEEEeCCCCcEEEE---eCCCCCCceEEEccCCC---EEEEEecCCCEEEEEEcCC
Q 018242 171 ISVILSGDKTGRLMKYDPATKQVTVL---LGNLSFPNGVALSEDGN---YILLAETTSCRILRYWLKT 232 (359)
Q Consensus 171 ~~~~~~~~~~g~v~~~d~~~~~~~~~---~~~~~~p~gia~~~d~~---~l~v~~~~~~~i~~~~~~~ 232 (359)
..+.+..++...+....+ .........++++|++. .++++...++.|..|++..
T Consensus 190 --------~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 190 --------LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp --------TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred --------CCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 234555555555554322 22334467899999972 3677777888999999864
No 264
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.42 E-value=6.5e-06 Score=75.13 Aligned_cols=198 Identities=12% Similarity=0.015 Sum_probs=104.6
Q ss_pred eEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceE-----EEEecCCCeEEE
Q 018242 38 SLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLG-----LCFNKTNGDLYI 112 (359)
Q Consensus 38 ~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g-----i~~~~~~g~l~v 112 (359)
.+.++|||+.++....++.|+.+|..+++.+.+...+... .|.+.. +.+... ..... +.+++++..+.+
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~----~~~g~~-l~~~~~-~~~~~~~~~~~~~spdg~~~~~ 158 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEW----KGYGTW-VANSDC-TKLVGIEILKRDWQPLTSWEKF 158 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTE----EEEEEE-EECTTS-SEEEEEEEEGGGCCCCCSHHHH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEeccccc----CCCCCE-EEeccC-CccccccccccccCCCCcceee
Confidence 3789999997766666678999999887655443211000 000000 000000 00000 112342222222
Q ss_pred Ee-----CCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeC-CCCEEEEEeCCCccccccceeeeeecCCCceEEEE
Q 018242 113 AD-----AYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQ-STGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKY 186 (359)
Q Consensus 113 ~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~-~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 186 (359)
.. ....|+.++.++++.+.+... ...+..+.++| +|++|++...... ......|+.+
T Consensus 159 ~~~~~~~~~~~l~~~d~~~g~~~~~~~~-----~~~~~~~~~sp~dg~~l~~~~~~~~------------~~~~~~l~~~ 221 (396)
T 3c5m_A 159 AEFYHTNPTCRLIKVDIETGELEVIHQD-----TAWLGHPIYRPFDDSTVGFCHEGPH------------DLVDARMWLV 221 (396)
T ss_dssp HHHHHTCCCEEEEEEETTTCCEEEEEEE-----SSCEEEEEEETTEEEEEEEEECSCS------------SSCSCCCEEE
T ss_pred eeeccCCCcceEEEEECCCCcEEeeccC-----CcccccceECCCCCCEEEEEecCCC------------CCCCceEEEE
Confidence 21 223588899888876655421 12456788999 7775655522100 0112469999
Q ss_pred eCCCCcEEEEeCC--CCCCceEEEccCCCEEEEEecC--C--CEEEEEEcCCCCCcceeEeecCCCCCCceEECC-CCCE
Q 018242 187 DPATKQVTVLLGN--LSFPNGVALSEDGNYILLAETT--S--CRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSP-RGGF 259 (359)
Q Consensus 187 d~~~~~~~~~~~~--~~~p~gia~~~d~~~l~v~~~~--~--~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~-~G~l 259 (359)
+.+++..+.+... ...+..++++|||+.+++.... . ..|++|++.... ...+...++. . +.+++ +|++
T Consensus 222 d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~---~~~l~~~~~~-~-~~~s~~dg~~ 296 (396)
T 3c5m_A 222 NEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE---NEEVMVMPPC-S-HLMSNFDGSL 296 (396)
T ss_dssp ETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCC---EEEEEECCSE-E-EEEECSSSSE
T ss_pred ECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCC---eEEeeeCCCC-C-CCccCCCCce
Confidence 9877665554332 1234567999999976665432 2 349999875432 2222223332 1 77788 8986
Q ss_pred EEEE
Q 018242 260 WVGI 263 (359)
Q Consensus 260 wv~~ 263 (359)
++..
T Consensus 297 l~~~ 300 (396)
T 3c5m_A 297 MVGD 300 (396)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6643
No 265
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.40 E-value=0.00021 Score=66.09 Aligned_cols=203 Identities=12% Similarity=0.026 Sum_probs=114.4
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA 115 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~ 115 (359)
-.+++++++|+.+.++..++.|..||..+++... .+.........+..+ ...+..+..
T Consensus 150 V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~--------------------~~~~h~~~v~~~s~~--~~~l~sgs~ 207 (420)
T 4gga_A 150 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR--------------------NMTSHSARVGSLSWN--SYILSSGSR 207 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE--------------------EECCCSSCEEEEEEE--TTEEEEEET
T ss_pred EEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE--------------------EEeCCCCceEEEeeC--CCEEEEEeC
Confidence 3589999999988899999999999998764322 111122223333333 334444454
Q ss_pred CCcEEEEeCCCCeE--EEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcE
Q 018242 116 YFGLLKVGPEGGLA--TAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQV 193 (359)
Q Consensus 116 ~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 193 (359)
...+..++...... ..+.. ....+..+.+.++|+ ..++. ...+.+..++..+++.
T Consensus 208 d~~i~~~d~~~~~~~~~~~~~-----h~~~~~~~~~~~~g~-~l~s~-----------------~~D~~v~i~~~~~~~~ 264 (420)
T 4gga_A 208 SGHIHHHDVRVAEHHVATLSG-----HSQEVCGLRWAPDGR-HLASG-----------------GNDNLVNVWPSAPGEG 264 (420)
T ss_dssp TSEEEEEETTSSSCEEEEEEC-----CSSCEEEEEECTTSS-EEEEE-----------------ETTSCEEEEESSCCSS
T ss_pred CCceeEeeecccceeeEEecc-----cccceeeeeecCCCC-eeeee-----------------eccccceEEeeccccc
Confidence 44577777654332 22211 123456788999999 44441 2245677777665432
Q ss_pred -----EEEeCCCCCCceEEEccCCCEEEEE--ecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEec-
Q 018242 194 -----TVLLGNLSFPNGVALSEDGNYILLA--ETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHS- 265 (359)
Q Consensus 194 -----~~~~~~~~~p~gia~~~d~~~l~v~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~- 265 (359)
............++++|++..++.+ .+.++.|..||+..... ...+ ........+.+.++++..++..+
T Consensus 265 ~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~--~~~~-~~~~~v~~~~~~~~~~~lv~~sg~ 341 (420)
T 4gga_A 265 GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC--LSAV-DAHSQVCSILWSPHYKELISGHGF 341 (420)
T ss_dssp CSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE--EEEE-ECSSCEEEEEEETTTTEEEEEECT
T ss_pred cceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc--ceee-ccccceeeeeecCCCCeEEEEEec
Confidence 1222233345678899876655544 34678999999765321 1111 22233455777888875554433
Q ss_pred CCCccccccccCC-ccceeeecCCcc
Q 018242 266 RRKGISKLVLSFP-WIGNVLIKLPID 290 (359)
Q Consensus 266 ~~~~~~~~~~~~~-~~g~~~~~~~~~ 290 (359)
.... +.+++ ++++.+..+..+
T Consensus 342 ~d~~----I~iwd~~~~~~v~~l~gH 363 (420)
T 4gga_A 342 AQNQ----LVIWKYPTMAKVAELKGH 363 (420)
T ss_dssp TTCC----EEEEETTTCCEEEEECCC
T ss_pred CCCE----EEEEECCCCcEEEEEcCC
Confidence 2221 44444 356666655443
No 266
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.37 E-value=2.9e-05 Score=69.12 Aligned_cols=194 Identities=9% Similarity=0.097 Sum_probs=109.1
Q ss_pred CceEEEcc--CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCC-CeEEE
Q 018242 36 PESLAFDA--LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTN-GDLYI 112 (359)
Q Consensus 36 p~~i~~~~--~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~-g~l~v 112 (359)
-.++++.+ +|+++.++..++.|..||..++++.... .+.........+++++++ +.+++
T Consensus 60 V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~------------------~~~~h~~~V~~v~~~p~~~g~~la 121 (316)
T 3bg1_A 60 VWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSH------------------EHAGHDSSVNSVCWAPHDYGLILA 121 (316)
T ss_dssp EEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEE------------------EECCCSSCCCEEEECCTTTCSCEE
T ss_pred EEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEE------------------EccCCCCceEEEEECCCCCCcEEE
Confidence 34778865 4777888899999999998875322211 122222346789999842 55555
Q ss_pred E-eCCCcEEEEeCCCCe-EEEEeecCCCccccccceEEEeCCC-----------------CEEEEEeCCCccccccceee
Q 018242 113 A-DAYFGLLKVGPEGGL-ATAVATQSEGIPFRFCNSLDIDQST-----------------GIIYFTDSSSQFQRRNHISV 173 (359)
Q Consensus 113 ~-~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~d~~g-----------------~~l~v~d~~~~~~~~~~~~~ 173 (359)
+ ...+.|..++..++. .... ..... ....+..+.++|++ + ++++
T Consensus 122 sgs~D~~i~lwd~~~~~~~~~~-~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s-------------- 184 (316)
T 3bg1_A 122 CGSSDGAISLLTYTGEGQWEVK-KINNA-HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIK-RFAS-------------- 184 (316)
T ss_dssp EECSSSCEEEEEECSSSCEEEC-CBTTS-SSSCBCCCEECCCCCC------CCSCCCCCCC-BEEC--------------
T ss_pred EEcCCCCEEEEecCCCCCccee-eeecc-ccCCcceEEEccccCCccccccccccCccccc-eEEE--------------
Confidence 4 434457777776542 2111 11111 11245567777762 3 2222
Q ss_pred eeecCCCceEEEEeCCCC-cEEE---EeCCCCCCceEEEccCC---CEEEEEecCCCEEEEEEcCCCCCc--ceeEeecC
Q 018242 174 ILSGDKTGRLMKYDPATK-QVTV---LLGNLSFPNGVALSEDG---NYILLAETTSCRILRYWLKTSKAG--TIEIVAQL 244 (359)
Q Consensus 174 ~~~~~~~g~v~~~d~~~~-~~~~---~~~~~~~p~gia~~~d~---~~l~v~~~~~~~i~~~~~~~~~~~--~~~~~~~~ 244 (359)
++..+.|..+|.+++ ..+. +..+......++++|++ ..++++.+.++.|..|++...... ....+...
T Consensus 185 ---gs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~ 261 (316)
T 3bg1_A 185 ---GGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKF 261 (316)
T ss_dssp ---CBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEEC
T ss_pred ---ecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcC
Confidence 233456666665532 2222 22233446789999986 236777788899999998652111 11122222
Q ss_pred CCCCCceEECCCCCEEEEEecCC
Q 018242 245 PGFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 245 ~~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
......+++.++|++.++....+
T Consensus 262 ~~~v~~v~~sp~g~~las~~~D~ 284 (316)
T 3bg1_A 262 NDVVWHVSWSITANILAVSGGDN 284 (316)
T ss_dssp SSCEEEEEECTTTCCEEEEESSS
T ss_pred CCcEEEEEEcCCCCEEEEEcCCC
Confidence 33345688999998666554443
No 267
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.35 E-value=0.0018 Score=60.17 Aligned_cols=262 Identities=10% Similarity=0.058 Sum_probs=136.4
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA 115 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~ 115 (359)
..++.++ +.+++++..++.|..||..+++... .+.........+.++ ++.++.+..
T Consensus 162 v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~--------------------~~~~h~~~v~~~~~~--~~~l~s~s~ 217 (445)
T 2ovr_B 162 VWSSQMR--DNIIISGSTDRTLKVWNAETGECIH--------------------TLYGHTSTVRCMHLH--EKRVVSGSR 217 (445)
T ss_dssp EEEEEEE--TTEEEEEETTSCEEEEETTTTEEEE--------------------EECCCSSCEEEEEEE--TTEEEEEET
T ss_pred EEEEEec--CCEEEEEeCCCeEEEEECCcCcEEE--------------------EECCCCCcEEEEEec--CCEEEEEeC
Confidence 3456665 5568889999999999998764322 112222334566665 556777776
Q ss_pred CCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEE
Q 018242 116 YFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTV 195 (359)
Q Consensus 116 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 195 (359)
.+.|..+|..+++....... ....+..+.+ +|+++..+ ...+.|..+|..+++...
T Consensus 218 dg~i~~wd~~~~~~~~~~~~----~~~~v~~~~~--~~~~l~~~------------------~~dg~i~iwd~~~~~~~~ 273 (445)
T 2ovr_B 218 DATLRVWDIETGQCLHVLMG----HVAAVRCVQY--DGRRVVSG------------------AYDFMVKVWDPETETCLH 273 (445)
T ss_dssp TSEEEEEESSSCCEEEEEEC----CSSCEEEEEE--CSSCEEEE------------------ETTSCEEEEEGGGTEEEE
T ss_pred CCEEEEEECCCCcEEEEEcC----CcccEEEEEE--CCCEEEEE------------------cCCCEEEEEECCCCcEeE
Confidence 66688999887765432221 1123445665 56635544 234678889987665543
Q ss_pred EeC-CCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCCCcccccc
Q 018242 196 LLG-NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKLV 274 (359)
Q Consensus 196 ~~~-~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~~~~~~~ 274 (359)
... .......+++ +++. +++...++.|..|++...+. ...+.........+.+ ++++.++....+. +
T Consensus 274 ~~~~~~~~v~~~~~--~~~~-l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~-----i 341 (445)
T 2ovr_B 274 TLQGHTNRVYSLQF--DGIH-VVSGSLDTSIRVWDVETGNC--IHTLTGHQSLTSGMEL--KDNILVSGNADST-----V 341 (445)
T ss_dssp EECCCSSCEEEEEE--CSSE-EEEEETTSCEEEEETTTCCE--EEEECCCCSCEEEEEE--ETTEEEEEETTSC-----E
T ss_pred EecCCCCceEEEEE--CCCE-EEEEeCCCeEEEEECCCCCE--EEEEcCCcccEEEEEE--eCCEEEEEeCCCe-----E
Confidence 332 2233445555 6665 45555678999999865421 1122211222233444 4555554444443 5
Q ss_pred ccCC-ccceeeecCCc---cceeeeeeccc------ccCcceEEEEEC-CCCCEEEEEEcc-CCceeeceEEEEEe-CCE
Q 018242 275 LSFP-WIGNVLIKLPI---DIVKIHSSLVK------LSGNGGMAMRIS-EQGNVLEILEEI-GRKMWRSISEVEEK-DGN 341 (359)
Q Consensus 275 ~~~~-~~g~~~~~~~~---~~~~~~~~~~~------~~~~~~~~~~~~-~~g~~~~~~~~~-~g~~~~~~~~~~~~-~g~ 341 (359)
..++ ..++.+..+.. ....+.++.+. +..+ +.+..++ .+++.+..+... .+.....+..+... ++.
T Consensus 342 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 420 (445)
T 2ovr_B 342 KIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDD-GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKL 420 (445)
T ss_dssp EEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETT-SEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEE
T ss_pred EEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCC-CeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEE
Confidence 5554 35665555443 22233333332 1222 3444455 335555555321 11122334555554 444
Q ss_pred EEEecCCCC----eEEEEcCC
Q 018242 342 LWIGSVNMP----YAGLYNYS 358 (359)
Q Consensus 342 l~ig~~~~~----~l~~~~~~ 358 (359)
+.+.+-.+. +|.+++.+
T Consensus 421 ~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 421 VCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp EEEEECSSSSSCCEEEEEECC
T ss_pred EEEEcccCCCCccEEEEEECC
Confidence 433333233 47777765
No 268
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.30 E-value=5.8e-05 Score=74.92 Aligned_cols=211 Identities=9% Similarity=0.008 Sum_probs=113.6
Q ss_pred ceEEEccCCCeeEEec-C----CCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCc-ceEEEEecCCCeE
Q 018242 37 ESLAFDALGEGPYTGV-S----DGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGR-PLGLCFNKTNGDL 110 (359)
Q Consensus 37 ~~i~~~~~G~~l~~~~-~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~gi~~~~~~g~l 110 (359)
.+++++|||+.+..+. . ...|+.+|..+++... ....... ..++++++++..|
T Consensus 124 ~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~---------------------~~~~~~~~~~~~~wspDg~~l 182 (695)
T 2bkl_A 124 GTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK---------------------VDVIEGGKYATPKWTPDSKGF 182 (695)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS---------------------SCCBSCCTTCCCEECTTSSEE
T ss_pred EEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC---------------------CcccCcccccceEEecCCCEE
Confidence 4678999999554332 2 2579999998874320 0011111 1468899955556
Q ss_pred EEEeCCCc-------------EEEEeCCCCeE--EEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeee
Q 018242 111 YIADAYFG-------------LLKVGPEGGLA--TAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVIL 175 (359)
Q Consensus 111 ~v~~~~~~-------------i~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~ 175 (359)
+.+..... |++++..+++. +.+.. ... ......++.+++||++|.++...
T Consensus 183 ~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~-~~~-~~~~~~~~~~SpDG~~l~~~~~~------------- 247 (695)
T 2bkl_A 183 YYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHE-RTG-DPTTFLQSDLSRDGKYLFVYILR------------- 247 (695)
T ss_dssp EEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEEC-CCC-CTTCEEEEEECTTSCCEEEEEEE-------------
T ss_pred EEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEe-cCC-CCEEEEEEEECCCCCEEEEEEeC-------------
Confidence 66544222 89999887652 12222 111 11244578999999977666211
Q ss_pred ecCCCceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEec---CCCEEEEEEcCCCCCcceeEeec-C-CCCCCc
Q 018242 176 SGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAET---TSCRILRYWLKTSKAGTIEIVAQ-L-PGFPDN 250 (359)
Q Consensus 176 ~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~---~~~~i~~~~~~~~~~~~~~~~~~-~-~~~p~~ 250 (359)
......|+.++..++..+.+............ ++++ +|+... .+..|++++++.......+.+.. . .....+
T Consensus 248 -~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~ 324 (695)
T 2bkl_A 248 -GWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLS 324 (695)
T ss_dssp -TTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEE
T ss_pred -CCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEE
Confidence 00234688888766666655443333334433 6787 777654 35789999976542211222222 1 112234
Q ss_pred eEECCCCCEEEEEecCCCccccccccCCccceeeecCCcc
Q 018242 251 IKRSPRGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPID 290 (359)
Q Consensus 251 i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 290 (359)
++++ ++.++++....+. ..+..++..|+....+..+
T Consensus 325 ~~~~-~~~lv~~~~~dg~---~~l~~~~~~g~~~~~l~~~ 360 (695)
T 2bkl_A 325 VSIV-GGHLSLEYLKDAT---SEVRVATLKGKPVRTVQLP 360 (695)
T ss_dssp EEEE-TTEEEEEEEETTE---EEEEEEETTCCEEEECCCS
T ss_pred EEEE-CCEEEEEEEECCE---EEEEEEeCCCCeeEEecCC
Confidence 5665 5666665554332 1133344445555555443
No 269
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.30 E-value=9.2e-05 Score=65.08 Aligned_cols=215 Identities=12% Similarity=0.038 Sum_probs=113.4
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCccc---------------------cccccccc
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEY---------------------DHAAKEHI 94 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~ 94 (359)
-.++++.++|+.+.++..++.|..||..+++.............+..+.+. .+......
T Consensus 70 V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (318)
T 4ggc_A 70 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGH 149 (318)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred EEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCc
Confidence 358999999998889999999999999876533221111000000000000 00000011
Q ss_pred CCcceEEEEecCCCeEEEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeee
Q 018242 95 CGRPLGLCFNKTNGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVI 174 (359)
Q Consensus 95 ~~~p~gi~~~~~~g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~ 174 (359)
......+.+.+.+..++.+...+.|..+|..+++...............+..+...+++..+....
T Consensus 150 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-------------- 215 (318)
T 4ggc_A 150 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATG-------------- 215 (318)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEE--------------
T ss_pred cCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEE--------------
Confidence 122334556663333444444445777777654321100000000112345566666554243321
Q ss_pred eecCCCceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEe-cCCCEEEEEEcCCCCCcceeEeecCCCCCCceEE
Q 018242 175 LSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAE-TTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKR 253 (359)
Q Consensus 175 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~ 253 (359)
.+...+.|..++..................+++.++++.++.+. ..++.|..|++...+ ....+....+....+++
T Consensus 216 -~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~--~~~~l~gH~~~V~~l~~ 292 (318)
T 4ggc_A 216 -GGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA--KVAELKGHTSRVLSLTM 292 (318)
T ss_dssp -ECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC--EEEEECCCSSCEEEEEE
T ss_pred -ecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc--EEEEEcCCCCCEEEEEE
Confidence 12334568888887666555444445567788889888766653 467889999976432 12222222233456899
Q ss_pred CCCCCEEEEEecCC
Q 018242 254 SPRGGFWVGIHSRR 267 (359)
Q Consensus 254 d~~G~lwv~~~~~~ 267 (359)
+++|++.++....+
T Consensus 293 spdg~~l~S~s~D~ 306 (318)
T 4ggc_A 293 SPDGATVASAAADE 306 (318)
T ss_dssp CTTSSCEEEEETTT
T ss_pred cCCCCEEEEEecCC
Confidence 99998666554443
No 270
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.30 E-value=9.3e-05 Score=66.29 Aligned_cols=206 Identities=12% Similarity=0.027 Sum_probs=111.6
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEE--ecCCCe-E
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCF--NKTNGD-L 110 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~--~~~~g~-l 110 (359)
....+++++++|+.++++..++.|..||..+++...+. ........+.+ ++ +++ +
T Consensus 87 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~---------------------~~~~~v~~~~~~~~~-~~~~l 144 (368)
T 3mmy_A 87 GPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIA---------------------QHDAPVKTIHWIKAP-NYSCV 144 (368)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE---------------------ECSSCEEEEEEEECS-SCEEE
T ss_pred CCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeec---------------------cccCceEEEEEEeCC-CCCEE
Confidence 45668999999998888999999999999887544321 12234567888 67 555 4
Q ss_pred EEEeCCCcEEEEeCCCCeEEEEeecCCC---ccccccceEEEeCCCCEEEEEeCCCccc----------cc---------
Q 018242 111 YIADAYFGLLKVGPEGGLATAVATQSEG---IPFRFCNSLDIDQSTGIIYFTDSSSQFQ----------RR--------- 168 (359)
Q Consensus 111 ~v~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~d~~g~~l~v~d~~~~~~----------~~--------- 168 (359)
+.+...+.|..+|..+++.......... .......-+....++. +.+-+....-. ..
T Consensus 145 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (368)
T 3mmy_A 145 MTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERG-LIVYQLENQPSEFRRIESPLKHQHRCVAIFKD 223 (368)
T ss_dssp EEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGC-EEEEECSSSCEEEEECCCSCSSCEEEEEEEEC
T ss_pred EEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCc-EEEEEeccccchhhhccccccCCCceEEEccc
Confidence 4445455588888876653222111100 0001111222333333 33332211000 00
Q ss_pred --cceeeeeecCCCceEEEEeCCCCc----EEEEeCCCC------------CCceEEEccCCCEEEEEecCCCEEEEEEc
Q 018242 169 --NHISVILSGDKTGRLMKYDPATKQ----VTVLLGNLS------------FPNGVALSEDGNYILLAETTSCRILRYWL 230 (359)
Q Consensus 169 --~~~~~~~~~~~~g~v~~~d~~~~~----~~~~~~~~~------------~p~gia~~~d~~~l~v~~~~~~~i~~~~~ 230 (359)
.....+..+...+.|..++.+... ...+..... ....++++|+++.+ ++...++.|..|++
T Consensus 224 ~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~s~~~dg~i~iwd~ 302 (368)
T 3mmy_A 224 KQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTL-ATVGSDGRFSFWDK 302 (368)
T ss_dssp TTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCE-EEEETTSCEEEEET
T ss_pred CCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEE-EEEccCCeEEEEEC
Confidence 000013334445667777766531 112211111 36789999999855 44556789999997
Q ss_pred CCCCCcceeEeecCCCCCCceEECCCCCEEEEEec
Q 018242 231 KTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHS 265 (359)
Q Consensus 231 ~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~ 265 (359)
.... ....+.........++++++|++.++...
T Consensus 303 ~~~~--~~~~~~~~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 303 DART--KLKTSEQLDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp TTTE--EEEECCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred CCCc--EEEEecCCCCCceEEEECCCCCeEEEEec
Confidence 6431 11222222233567899999986665544
No 271
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.29 E-value=0.00064 Score=60.64 Aligned_cols=152 Identities=13% Similarity=0.089 Sum_probs=85.0
Q ss_pred CcceEEEEecCCCeEEEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeee
Q 018242 96 GRPLGLCFNKTNGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVIL 175 (359)
Q Consensus 96 ~~p~gi~~~~~~g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~ 175 (359)
.....+.+++ + .|..+...+.|..++.+++..+.............+..++++|+|+ +.++-
T Consensus 15 ~~v~~~~~s~-~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~las~--------------- 76 (330)
T 2hes_X 15 EKIWSFDFSQ-G-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTS-LLAAG--------------- 76 (330)
T ss_dssp SCEEEEEEET-T-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSS-EEEEE---------------
T ss_pred CceeeeccCC-C-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCC-EEEEE---------------
Confidence 3456788887 4 5555554556888888765322221110111223577899999999 55541
Q ss_pred ecCCCceEEEEeCCCC-------cE-EEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC-CCcc-eeEeecCC
Q 018242 176 SGDKTGRLMKYDPATK-------QV-TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS-KAGT-IEIVAQLP 245 (359)
Q Consensus 176 ~~~~~g~v~~~d~~~~-------~~-~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~-~~~~-~~~~~~~~ 245 (359)
+..+.|..|+.+.. .. ..+..+......++|+|++++ +++...++.|..|++... .... ...+....
T Consensus 77 --s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~-las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~ 153 (330)
T 2hes_X 77 --SFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYY-LATCSRDKSVWIWETDESGEEYECISVLQEHS 153 (330)
T ss_dssp --ETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCE-EEEEETTSCEEEEECCTTCCCCEEEEEECCCS
T ss_pred --eCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCE-EEEEeCCCEEEEEeccCCCCCeEEEEEeccCC
Confidence 23456777776421 11 122233345678999999984 556667889999998432 1111 11222222
Q ss_pred CCCCceEECCCCCEEEEEecCCC
Q 018242 246 GFPDNIKRSPRGGFWVGIHSRRK 268 (359)
Q Consensus 246 ~~p~~i~~d~~G~lwv~~~~~~~ 268 (359)
.....+++.++|++.++....+.
T Consensus 154 ~~v~~v~~~p~~~~l~s~s~D~~ 176 (330)
T 2hes_X 154 QDVKHVIWHPSEALLASSSYDDT 176 (330)
T ss_dssp SCEEEEEECSSSSEEEEEETTSC
T ss_pred CceEEEEECCCCCEEEEEcCCCe
Confidence 33456888999987776655443
No 272
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.29 E-value=0.00035 Score=69.81 Aligned_cols=176 Identities=7% Similarity=-0.015 Sum_probs=96.4
Q ss_pred ceEEEccCCCeeEEecCC---------CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCC
Q 018242 37 ESLAFDALGEGPYTGVSD---------GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTN 107 (359)
Q Consensus 37 ~~i~~~~~G~~l~~~~~~---------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~ 107 (359)
.++.++|||+.+..+..+ +.++.||..+++.+.+ ..........+++|++
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l---------------------~~~~~~~~~~~~SPdG 123 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITE---------------------ERIPNNTQWVTWSPVG 123 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS---------------------SCCCTTEEEEEECSST
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEc---------------------ccCCCcceeeEECCCC
Confidence 347889999966666553 5678999988743221 1112234567899955
Q ss_pred CeEEEEeCCCcEEEEeCCCCeEEEEeecCCCc-c-------------ccccceEEEeCCCCEEEEEeC--CC--cccc--
Q 018242 108 GDLYIADAYFGLLKVGPEGGLATAVATQSEGI-P-------------FRFCNSLDIDQSTGIIYFTDS--SS--QFQR-- 167 (359)
Q Consensus 108 g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~-~-------------~~~~~~l~~d~~g~~l~v~d~--~~--~~~~-- 167 (359)
..|..+ ..+.|+.++..+++.+.+....... . +.....+.++|||++|.++.. +. .|..
T Consensus 124 ~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~ 202 (740)
T 4a5s_A 124 HKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSF 202 (740)
T ss_dssp TCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEE
T ss_pred CEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEe
Confidence 555554 3457999998887765442211000 0 122245899999996665521 10 0000
Q ss_pred --c---cc--eeee-e--ec--CCCceEEEEeCCC---C---cEEEEeC------CCCCCceEEEccCCCEEE-EEecCC
Q 018242 168 --R---NH--ISVI-L--SG--DKTGRLMKYDPAT---K---QVTVLLG------NLSFPNGVALSEDGNYIL-LAETTS 222 (359)
Q Consensus 168 --~---~~--~~~~-~--~~--~~~g~v~~~d~~~---~---~~~~~~~------~~~~p~gia~~~d~~~l~-v~~~~~ 222 (359)
. .+ ...+ + .+ .....|+.+|.++ + +...+.. .......++++|||+.++ +.....
T Consensus 203 ~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~ 282 (740)
T 4a5s_A 203 YSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQ 282 (740)
T ss_dssp CCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESST
T ss_pred ecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCC
Confidence 0 00 0000 0 01 1123688899987 6 4444432 122235678999998433 333332
Q ss_pred --CEEEEEEcCCCC
Q 018242 223 --CRILRYWLKTSK 234 (359)
Q Consensus 223 --~~i~~~~~~~~~ 234 (359)
..|+.+++++.+
T Consensus 283 ~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 283 NYSVMDICDYDESS 296 (740)
T ss_dssp TEEEEEEEEEETTT
T ss_pred CEEEEEEEECCCCc
Confidence 368888886553
No 273
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.29 E-value=6.1e-05 Score=67.43 Aligned_cols=198 Identities=10% Similarity=0.121 Sum_probs=105.0
Q ss_pred cCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecC---CC----eEEEEeC
Q 018242 43 ALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKT---NG----DLYIADA 115 (359)
Q Consensus 43 ~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~---~g----~l~v~~~ 115 (359)
|...++..+...++|+.||+++.....+. .++++++.+-+. +| .+++++.
T Consensus 38 p~~s~ii~t~k~~gL~Vydl~G~~l~~~~-----------------------~g~~nnVD~r~~~~l~g~~~dla~as~R 94 (355)
T 3amr_A 38 PQNSKLITTNKKSGLVVYSLDGKMLHSYN-----------------------TGKLNNVDIRYDFPLNGKKVDIAAASNR 94 (355)
T ss_dssp GGGCEEEEEETTTEEEEEETTSCEEEEEC-----------------------CSCEEEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCccEEEEEcCCCCEEEEcCCCcEEEEcc-----------------------CCCcccEEEecccccCCceEeEEEEeCC
Confidence 34453333445579999999665333321 133444433220 11 2455555
Q ss_pred C---CcEE--EEeCCCCeEEEEeecC-C-CccccccceEEE--eCC-CC-EEEEEeCCCccccccceeeeeecCCCceEE
Q 018242 116 Y---FGLL--KVGPEGGLATAVATQS-E-GIPFRFCNSLDI--DQS-TG-IIYFTDSSSQFQRRNHISVILSGDKTGRLM 184 (359)
Q Consensus 116 ~---~~i~--~~~~~~~~~~~~~~~~-~-~~~~~~~~~l~~--d~~-g~-~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 184 (359)
. +.|. .+|+++++++.+.... + ......|.+++. +++ |+ ++|+++ ..|.+.
T Consensus 95 ~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~------------------k~G~~~ 156 (355)
T 3amr_A 95 SEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTG------------------KEGEFE 156 (355)
T ss_dssp STTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEEC------------------SSSEEE
T ss_pred CCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEEC------------------CCCeEE
Confidence 4 3454 4477777766542210 1 122357889888 775 44 456652 223444
Q ss_pred EEeC---CCCcEE----EEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-----CCCCCCceE
Q 018242 185 KYDP---ATKQVT----VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-----LPGFPDNIK 252 (359)
Q Consensus 185 ~~d~---~~~~~~----~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-----~~~~p~~i~ 252 (359)
.|.. ..+... .-..-...|.+++.++....||+++.. ..||+|+.++....+.+.+.. +..-+.||+
T Consensus 157 q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLa 235 (355)
T 3amr_A 157 QYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEED-EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLT 235 (355)
T ss_dssp EEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETT-TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEE
T ss_pred EEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEeccc-ceEEEEeCCcCCCCCceEEEEecCCccccCcceEE
Confidence 3322 222121 112223578999999888889999977 569999976543222222222 222367888
Q ss_pred EC--CCCC--EEEEEecCCCccccccccCCc--cceeeecC
Q 018242 253 RS--PRGG--FWVGIHSRRKGISKLVLSFPW--IGNVLIKL 287 (359)
Q Consensus 253 ~d--~~G~--lwv~~~~~~~~~~~~~~~~~~--~g~~~~~~ 287 (359)
+. ++|+ |++++.++.. ..+|+. ..+.+..+
T Consensus 236 i~~~~~g~gyLivSsQG~~s-----~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 236 IYYAADGKGYLMASSQGNSS-----YAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEECGGGCEEEEEEEGGGTE-----EEEEESSTTCCEEEEE
T ss_pred EEecCCCCEEEEEEcCCCCE-----EEEEECCCCCcEEEEE
Confidence 84 4444 6666655543 444544 33444444
No 274
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.26 E-value=0.00049 Score=65.85 Aligned_cols=204 Identities=7% Similarity=-0.141 Sum_probs=120.4
Q ss_pred CCceEEEccC------CCeeEEecCCCEEEEEEcCCcceE---EEeecCCCCCCCCCCcccccccccccCCcceEEEEec
Q 018242 35 GPESLAFDAL------GEGPYTGVSDGRIIKWHQDQRRWL---HFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNK 105 (359)
Q Consensus 35 ~p~~i~~~~~------G~~l~~~~~~~~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~ 105 (359)
...++++.|+ +.++.++..++.|..||..+++.. .+. . ..| ...+.........+++++
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~--~------~~p----~~~l~~h~~~v~sv~~s~ 276 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM--C------EKP----SLTLSLADSLITTFDFLS 276 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC--C------CSC----SEEECCTTTCEEEEEESS
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee--e------cCc----eEEEEcCCCCEEEEEecC
Confidence 3457889886 566778888999999998764210 000 0 000 001122223456888887
Q ss_pred CCCeEEEEeCCCcEEEEeCCCCeE--EEEeecCCCccccccceE--EEeCCC-CEEEEEeCCCccccccceeeeeecCCC
Q 018242 106 TNGDLYIADAYFGLLKVGPEGGLA--TAVATQSEGIPFRFCNSL--DIDQST-GIIYFTDSSSQFQRRNHISVILSGDKT 180 (359)
Q Consensus 106 ~~g~l~v~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~l--~~d~~g-~~l~v~d~~~~~~~~~~~~~~~~~~~~ 180 (359)
++.|..+...+.|..+|..++.. ..+.. ....+..+ .+.++| + +.++- +..
T Consensus 277 -~~~lasgs~DgtV~lWD~~~~~~~~~~~~~-----H~~~V~sv~~~~s~~g~~-~laS~-----------------S~D 332 (524)
T 2j04_B 277 -PTTVVCGFKNGFVAEFDLTDPEVPSFYDQV-----HDSYILSVSTAYSDFEDT-VVSTV-----------------AVD 332 (524)
T ss_dssp -SSEEEEEETTSEEEEEETTBCSSCSEEEEC-----SSSCEEEEEEECCTTSCC-EEEEE-----------------ETT
T ss_pred -CCeEEEEeCCCEEEEEECCCCCCceEEeec-----ccccEEEEEEEcCCCCCe-EEEEe-----------------ccC
Confidence 66777776656688899886531 11211 11245667 456777 6 66662 335
Q ss_pred ceEEEEeCCCCcEE-EEeCCC--CCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCC
Q 018242 181 GRLMKYDPATKQVT-VLLGNL--SFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRG 257 (359)
Q Consensus 181 g~v~~~d~~~~~~~-~~~~~~--~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G 257 (359)
+.|..||..+++.. .+.... .....++++|+++. +++...++.|..|++..... ...+....+....++++++|
T Consensus 333 ~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~~~~--~~~l~gH~~~V~sva~Sp~g 409 (524)
T 2j04_B 333 GYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYS-YIYSDGASSLRAVPSRAAFA--VHPLVSRETTITAIGVSRLH 409 (524)
T ss_dssp SEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTE-EEEECSSSEEEEEETTCTTC--CEEEEECSSCEEEEECCSSC
T ss_pred CeEEEEECCCCCcccccccccccCcccceEeCCCcCe-EEEeCCCCcEEEEECccccc--ceeeecCCCceEEEEeCCCC
Confidence 67888997654321 111111 12467999999884 66767788999999765422 12232223335678999999
Q ss_pred CEEEEEecCCCccccccccCCccce
Q 018242 258 GFWVGIHSRRKGISKLVLSFPWIGN 282 (359)
Q Consensus 258 ~lwv~~~~~~~~~~~~~~~~~~~g~ 282 (359)
.+.++....+. +..++..++
T Consensus 410 ~~l~Sgs~Dgt-----v~lwd~~~~ 429 (524)
T 2j04_B 410 PMVLAGSADGS-----LIITNAARR 429 (524)
T ss_dssp CBCEEEETTTE-----EECCBSCSS
T ss_pred CeEEEEECCCE-----EEEEechHh
Confidence 86665555443 555554443
No 275
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.26 E-value=0.00019 Score=66.46 Aligned_cols=168 Identities=10% Similarity=0.051 Sum_probs=97.8
Q ss_pred CCceEEEccCCCeeEEecCCCEEEEEEcC---CcceEEEeecCCCCCCCCCCcccccccccc--cCCcceEEE--EecCC
Q 018242 35 GPESLAFDALGEGPYTGVSDGRIIKWHQD---QRRWLHFARTSPNRDGCEGAYEYDHAAKEH--ICGRPLGLC--FNKTN 107 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~~~~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~gi~--~~~~~ 107 (359)
...++++.+++..++++..++.|..||.. +++........ . ...+.+.. .......+. +.+++
T Consensus 113 ~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~---~-------i~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (437)
T 3gre_A 113 TVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCE---C-------IRKINLKNFGKNEYAVRMRAFVNEEK 182 (437)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEE---E-------EEEEEGGGGSSCCCEEEEEEEECSSC
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccc---e-------eEEEEccCcccccCceEEEEEEcCCC
Confidence 55689999999988899999999999884 32222111000 0 00001111 112233343 34523
Q ss_pred CeEEEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEe
Q 018242 108 GDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYD 187 (359)
Q Consensus 108 g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 187 (359)
..++.+...+.|..+|..+++........ .....+..++++|+++++..+ +..+.|..||
T Consensus 183 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~h~~~v~~~~~s~~~~~l~s~------------------~~dg~i~iwd 242 (437)
T 3gre_A 183 SLLVALTNLSRVIIFDIRTLERLQIIENS--PRHGAVSSICIDEECCVLILG------------------TTRGIIDIWD 242 (437)
T ss_dssp EEEEEEETTSEEEEEETTTCCEEEEEECC--GGGCCEEEEEECTTSCEEEEE------------------ETTSCEEEEE
T ss_pred CEEEEEeCCCeEEEEeCCCCeeeEEEccC--CCCCceEEEEECCCCCEEEEE------------------cCCCeEEEEE
Confidence 34444555556889999887654322210 012367889999999944444 2356799999
Q ss_pred CCCCcEEEEe--CCCCCCceEEEc----cCCCEEEEEecCCCEEEEEEcCCC
Q 018242 188 PATKQVTVLL--GNLSFPNGVALS----EDGNYILLAETTSCRILRYWLKTS 233 (359)
Q Consensus 188 ~~~~~~~~~~--~~~~~p~gia~~----~d~~~l~v~~~~~~~i~~~~~~~~ 233 (359)
..+++..... .+......+++. ++++ ++++...++.|..|++...
T Consensus 243 ~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~ 293 (437)
T 3gre_A 243 IRFNVLIRSWSFGDHAPITHVEVCQFYGKNSV-IVVGGSSKTFLTIWNFVKG 293 (437)
T ss_dssp TTTTEEEEEEBCTTCEEEEEEEECTTTCTTEE-EEEEESTTEEEEEEETTTT
T ss_pred cCCccEEEEEecCCCCceEEEEeccccCCCcc-EEEEEcCCCcEEEEEcCCC
Confidence 8876654322 222334567554 4554 6677777889999998643
No 276
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.26 E-value=0.00019 Score=64.18 Aligned_cols=140 Identities=17% Similarity=0.229 Sum_probs=84.1
Q ss_pred CCeEEEE-eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCC----CC---EEEEEeCCCccccccceeeeeecC
Q 018242 107 NGDLYIA-DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQS----TG---IIYFTDSSSQFQRRNHISVILSGD 178 (359)
Q Consensus 107 ~g~l~v~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~----g~---~l~v~d~~~~~~~~~~~~~~~~~~ 178 (359)
...++++ +...||+.||.++..++.+.. ..+|++.+-++ |+ .+++++... +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G~~l~~~~~-------g~~nnVD~r~~~~l~g~~~dla~as~R~~-------------~~ 98 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDGKMLHSYNT-------GKLNNVDIRYDFPLNGKKVDIAAASNRSE-------------GK 98 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTSCEEEEECC-------SCEEEEEEEEEEEETTEEEEEEEEEECST-------------TC
T ss_pred CccEEEEEcCCCCEEEEcCCCcEEEEccC-------CCcccEEEecccccCCceEeEEEEeCCCC-------------CC
Confidence 3445665 445689999997766655421 23455544432 22 146664320 01
Q ss_pred CCceEEEEeCCCCcEEEEe-------CCCCCCceEEE--ccC-CC-EEEEEecCCCEEEEEEcCCCCC--cceeEeec--
Q 018242 179 KTGRLMKYDPATKQVTVLL-------GNLSFPNGVAL--SED-GN-YILLAETTSCRILRYWLKTSKA--GTIEIVAQ-- 243 (359)
Q Consensus 179 ~~g~v~~~d~~~~~~~~~~-------~~~~~p~gia~--~~d-~~-~l~v~~~~~~~i~~~~~~~~~~--~~~~~~~~-- 243 (359)
..-.+|.+|++++.+..+. .....|.|+|+ +++ ++ ++|+++.. +.+..|++..... ...+....
T Consensus 99 n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 99 NTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEec
Confidence 1235677798887776652 23367899999 664 43 47777655 7999988853211 12232322
Q ss_pred CCCCCCceEECC-CCCEEEEEecCC
Q 018242 244 LPGFPDNIKRSP-RGGFWVGIHSRR 267 (359)
Q Consensus 244 ~~~~p~~i~~d~-~G~lwv~~~~~~ 267 (359)
+++.|.++.+|+ .|.||++....+
T Consensus 178 lgsq~EgcvvDd~~g~Lyv~eEd~G 202 (355)
T 3amr_A 178 MNSQTEGMAADDEYGRLYIAEEDEA 202 (355)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTTE
T ss_pred CCCCcceEEEcCCCCeEEEecccce
Confidence 567789999986 578999998744
No 277
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.24 E-value=0.0017 Score=60.23 Aligned_cols=202 Identities=14% Similarity=0.108 Sum_probs=112.3
Q ss_pred EEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCCCcE
Q 018242 40 AFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAYFGL 119 (359)
Q Consensus 40 ~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~~~i 119 (359)
++..+|+.++++..++.|..||..+++.... +.........+.+ ++..++.+...+.|
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~--------------------~~~h~~~v~~l~~--~~~~l~sg~~dg~i 195 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRI--------------------LTGHTGSVLCLQY--DERVIITGSSDSTV 195 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCCEEEE--------------------ECCCSSCEEEEEC--CSSEEEEEETTSCE
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCeEEEE--------------------EcCCCCcEEEEEE--CCCEEEEEcCCCeE
Confidence 4556888788999999999999987643321 1222233445555 25566666656669
Q ss_pred EEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEE----E
Q 018242 120 LKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVT----V 195 (359)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~----~ 195 (359)
..+|.++++....... ....+..+.++ ++.++.+ +..+.|..+|..++... .
T Consensus 196 ~vwd~~~~~~~~~~~~----h~~~v~~l~~~--~~~l~s~------------------s~dg~i~vwd~~~~~~~~~~~~ 251 (435)
T 1p22_A 196 RVWDVNTGEMLNTLIH----HCEAVLHLRFN--NGMMVTC------------------SKDRSIAVWDMASPTDITLRRV 251 (435)
T ss_dssp EEEESSSCCEEEEECC----CCSCEEEEECC--TTEEEEE------------------ETTSCEEEEECSSSSCCEEEEE
T ss_pred EEEECCCCcEEEEEcC----CCCcEEEEEEc--CCEEEEe------------------eCCCcEEEEeCCCCCCceeeeE
Confidence 9999988765432221 11234556664 3424444 23567888887765432 2
Q ss_pred EeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCCCccccccc
Q 018242 196 LLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKLVL 275 (359)
Q Consensus 196 ~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~~~~~~~~ 275 (359)
..........+++ +++. +++...++.|..||+..... ...+.........+.+ ++++.++....+. +.
T Consensus 252 ~~~~~~~v~~~~~--~~~~-l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~-----i~ 319 (435)
T 1p22_A 252 LVGHRAAVNVVDF--DDKY-IVSASGDRTIKVWNTSTCEF--VRTLNGHKRGIACLQY--RDRLVVSGSSDNT-----IR 319 (435)
T ss_dssp ECCCSSCEEEEEE--ETTE-EEEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEE--ETTEEEEEETTSC-----EE
T ss_pred ecCCCCcEEEEEe--CCCE-EEEEeCCCeEEEEECCcCcE--EEEEcCCCCcEEEEEe--CCCEEEEEeCCCe-----EE
Confidence 2222333455665 5664 55556778999999865421 2222221222233455 4555554444443 55
Q ss_pred cCC-ccceeeecCCccceeeeeecc
Q 018242 276 SFP-WIGNVLIKLPIDIVKIHSSLV 299 (359)
Q Consensus 276 ~~~-~~g~~~~~~~~~~~~~~~~~~ 299 (359)
.++ ..++.+..+......+..+.+
T Consensus 320 iwd~~~~~~~~~~~~h~~~v~~~~~ 344 (435)
T 1p22_A 320 LWDIECGACLRVLEGHEELVRCIRF 344 (435)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEC
T ss_pred EEECCCCCEEEEEeCCcCcEEEEEe
Confidence 555 356666666554444555444
No 278
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.24 E-value=2.1e-05 Score=75.46 Aligned_cols=154 Identities=9% Similarity=-0.004 Sum_probs=96.7
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEE--EEecCCC-eEEE
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGL--CFNKTNG-DLYI 112 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi--~~~~~~g-~l~v 112 (359)
..++++.+++ .++++..++.|..||..+++.... .+.........+ ++++ ++ ++++
T Consensus 269 v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~-------------------~~~~H~~~V~sv~~~~s~-~g~~~la 327 (524)
T 2j04_B 269 ITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSF-------------------YDQVHDSYILSVSTAYSD-FEDTVVS 327 (524)
T ss_dssp EEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSE-------------------EEECSSSCEEEEEEECCT-TSCCEEE
T ss_pred EEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceE-------------------EeecccccEEEEEEEcCC-CCCeEEE
Confidence 3478888766 489999999999999976421000 111222335666 3455 55 6666
Q ss_pred EeCC-CcEEEEeCCCCeEE-EEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCC
Q 018242 113 ADAY-FGLLKVGPEGGLAT-AVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPAT 190 (359)
Q Consensus 113 ~~~~-~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 190 (359)
+... +.|..+|..+++.. .+.... ....+..++++|+++ .+++.. ..+.|..+|..+
T Consensus 328 S~S~D~tvklWD~~~~~~~~~~~~~~---~~~~v~~v~fsp~~~-~l~s~~-----------------~d~tv~lwd~~~ 386 (524)
T 2j04_B 328 TVAVDGYFYIFNPKDIATTKTTVSRF---RGSNLVPVVYCPQIY-SYIYSD-----------------GASSLRAVPSRA 386 (524)
T ss_dssp EEETTSEEEEECGGGHHHHCEEEEEC---SCCSCCCEEEETTTT-EEEEEC-----------------SSSEEEEEETTC
T ss_pred EeccCCeEEEEECCCCCccccccccc---ccCcccceEeCCCcC-eEEEeC-----------------CCCcEEEEECcc
Confidence 5444 45778888764421 111111 111356799999999 666622 244688888876
Q ss_pred CcE-EEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCC
Q 018242 191 KQV-TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKT 232 (359)
Q Consensus 191 ~~~-~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~ 232 (359)
+.. ..+.........++++|+++. +++.+.++.|..|++..
T Consensus 387 ~~~~~~l~gH~~~V~sva~Sp~g~~-l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 387 AFAVHPLVSRETTITAIGVSRLHPM-VLAGSADGSLIITNAAR 428 (524)
T ss_dssp TTCCEEEEECSSCEEEEECCSSCCB-CEEEETTTEEECCBSCS
T ss_pred cccceeeecCCCceEEEEeCCCCCe-EEEEECCCEEEEEechH
Confidence 553 334444556789999999984 56677889999998654
No 279
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.22 E-value=0.00034 Score=63.25 Aligned_cols=202 Identities=5% Similarity=-0.080 Sum_probs=110.3
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
..-.++++++||+++.++.. .++..||.++.+..... . . .....+.+.+..+.+.++
T Consensus 20 ~~V~~v~fs~dg~~la~g~~-~~~~iw~~~~~~~~~~~------------------~--~--~~~~~~~~~~~~~~~~~~ 76 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTL-KSFEIYNVHPVAHIMSQ------------------E--M--RHLSKVRMLHRTNYVAFV 76 (355)
T ss_dssp CCCCEEEECTTSSEEEEECS-SEEEEEEETTEEEEEEE------------------E--C--SCCCEEEECTTSSEEEEE
T ss_pred CceEEEEECCCCCEEEEEcC-CEEEEEecCCcceeeee------------------e--c--CCeEEEEEcCCCCEEEEE
Confidence 35569999999996666655 56889998765322111 0 0 112345566634445444
Q ss_pred eCC-CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCC-------CCEEEEEeCCCc-cccccc-----------eee
Q 018242 114 DAY-FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQS-------TGIIYFTDSSSQ-FQRRNH-----------ISV 173 (359)
Q Consensus 114 ~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~-------g~~l~v~d~~~~-~~~~~~-----------~~~ 173 (359)
... +.|..+|..+++...... .. ..+..+.++++ +. +++=+.... -..... ...
T Consensus 77 ~~~d~~v~iWd~~~~~~~~~~~-~~----~~v~~v~~~~~~~~~~~~~~-i~i~d~~~~~~~~~~~~~~~~~~~~s~~~l 150 (355)
T 3vu4_A 77 TGVKEVVHIWDDVKKQDVSRIK-VD----APVKDLFLSREFIVVSYGDV-ISVFKFGNPWKRITDDIRFGGVCEFSNGLL 150 (355)
T ss_dssp CSSTTEEEEEETTTTEEEEEEE-CS----SCEEEEEECSSEEEEEETTE-EEEEESSTTCCBSSCCEEEEEEEEEETTEE
T ss_pred ECCccEEEEEECCCCcEEEEEE-CC----CceEEEEEcCCEEEEEEcCE-EEEEECCCCceeeEEeccCCceEEEEccEE
Confidence 333 358888988776533222 11 12334444443 33 333332211 000000 000
Q ss_pred eee-cCCCceEEEEeCCCCc-----------------EEEEeCCCCCCceEEEccCCCEEEEEecCCCE-EEEEEcCCCC
Q 018242 174 ILS-GDKTGRLMKYDPATKQ-----------------VTVLLGNLSFPNGVALSEDGNYILLAETTSCR-ILRYWLKTSK 234 (359)
Q Consensus 174 ~~~-~~~~g~v~~~d~~~~~-----------------~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~-i~~~~~~~~~ 234 (359)
... +...|.|..+|..++. ...+..+......++++||++ ++++.+.++. |..||+...+
T Consensus 151 a~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~-~l~s~s~d~~~v~iwd~~~~~ 229 (355)
T 3vu4_A 151 VYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD-MVATCSQDGTIIRVFKTEDGV 229 (355)
T ss_dssp EEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSS-EEEEEETTCSEEEEEETTTCC
T ss_pred EEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC-EEEEEeCCCCEEEEEECCCCc
Confidence 111 4556788889987654 344444445568999999998 5566667787 9999986432
Q ss_pred CcceeEee-c-CCCCCCceEECCCCCEEEEEecCC
Q 018242 235 AGTIEIVA-Q-LPGFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 235 ~~~~~~~~-~-~~~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
....+. . ..+....++++++|++.++....+
T Consensus 230 --~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~ 262 (355)
T 3vu4_A 230 --LVREFRRGLDRADVVDMKWSTDGSKLAVVSDKW 262 (355)
T ss_dssp --EEEEEECTTCCSCEEEEEECTTSCEEEEEETTC
T ss_pred --EEEEEEcCCCCCcEEEEEECCCCCEEEEEECCC
Confidence 122233 1 223345689999998777665544
No 280
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.21 E-value=0.00086 Score=59.85 Aligned_cols=180 Identities=9% Similarity=-0.005 Sum_probs=103.0
Q ss_pred CCceEEEccCCCeeEEec-C----CCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCe
Q 018242 35 GPESLAFDALGEGPYTGV-S----DGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGD 109 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~~~~-~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~ 109 (359)
....+.++|||+.++... . ...|+.++..+++...+. .... ...+.++|++..
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~---------------------~~~~-~~~~~wspdg~~ 117 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKIL---------------------EAKN-IRSLEWNEDSRK 117 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEE---------------------EESE-EEEEEECTTSSE
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEE---------------------cCCC-ccceeECCCCCE
Confidence 456789999998555433 2 235899998877544332 1112 567888885555
Q ss_pred EEEEeC---------------------------CCcEEEEeCCCCeE-EEEeecCCCccccccceEEEeCCCCEEEEEeC
Q 018242 110 LYIADA---------------------------YFGLLKVGPEGGLA-TAVATQSEGIPFRFCNSLDIDQSTGIIYFTDS 161 (359)
Q Consensus 110 l~v~~~---------------------------~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~ 161 (359)
|+++.. ...|++++..+++. +.+.. + .+..+.++|+| .+|++..
T Consensus 118 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-----~--~~~~~~~spdg-~~~~~~~ 189 (347)
T 2gop_A 118 LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-----P--RFSSGIWHRDK-IVVNVPH 189 (347)
T ss_dssp EEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-----E--TTCEEEEETTE-EEEEEEC
T ss_pred EEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-----C--CcccccCCCCe-EEEEEec
Confidence 666532 13488899988876 44432 1 45678999999 5666633
Q ss_pred CCccccccceeeeeecCC-CceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecC-------CCEEEEEEcCCC
Q 018242 162 SSQFQRRNHISVILSGDK-TGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETT-------SCRILRYWLKTS 233 (359)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~-~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~-------~~~i~~~~~~~~ 233 (359)
...- .... ...|+.++ +++.+.+... . ....++|||+.+++.... ...|+.++ .+
T Consensus 190 ~~~~----------~~~~~~~~l~~~d--~~~~~~l~~~--~-~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~- 252 (347)
T 2gop_A 190 REII----------PQYFKFWDIYIWE--DGKEEKMFEK--V-SFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD-GK- 252 (347)
T ss_dssp CCSS----------CCSSCCEEEEEEE--TTEEEEEEEE--E-SEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC-SS-
T ss_pred cccc----------ccccccccEEEeC--CCceEEeccC--c-ceeeECCCCCEEEEEEccccCCccccceEEEEC-CC-
Confidence 2100 0001 34688898 4666555433 1 122348999977666543 35788887 21
Q ss_pred CCcceeEeec-CCCCCCc-eEECCCCCEEEEEecC
Q 018242 234 KAGTIEIVAQ-LPGFPDN-IKRSPRGGFWVGIHSR 266 (359)
Q Consensus 234 ~~~~~~~~~~-~~~~p~~-i~~d~~G~lwv~~~~~ 266 (359)
....+.. ......+ +.++ +| +++.....
T Consensus 253 ---~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~ 282 (347)
T 2gop_A 253 ---EVMGILDEVDRGVGQAKIKD-GK-VYFTLFEE 282 (347)
T ss_dssp ---CEEESSTTCCSEEEEEEEET-TE-EEEEEEET
T ss_pred ---ceEeccccCCcccCCccEEc-Cc-EEEEEecC
Confidence 1222221 1222233 6777 78 76655443
No 281
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.19 E-value=2.1e-05 Score=74.56 Aligned_cols=117 Identities=16% Similarity=0.243 Sum_probs=78.8
Q ss_pred cceEEEEecCCCeEEEEeCC----------------------CcEEEEeCCCC-----e--EEEEee--cC---------
Q 018242 97 RPLGLCFNKTNGDLYIADAY----------------------FGLLKVGPEGG-----L--ATAVAT--QS--------- 136 (359)
Q Consensus 97 ~p~gi~~~~~~g~l~v~~~~----------------------~~i~~~~~~~~-----~--~~~~~~--~~--------- 136 (359)
+|-++.++|.++++|++-.. +.|+++..+++ . +..+.. ..
T Consensus 385 RpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~~~ 464 (592)
T 4a9v_A 385 RPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPKG 464 (592)
T ss_dssp CEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGGG
T ss_pred CccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccccc
Confidence 57799999989999998432 23888876432 1 222221 00
Q ss_pred ------CCccccccceEEEeCCCCEEEE-EeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCC--CCCCceEE
Q 018242 137 ------EGIPFRFCNSLDIDQSTGIIYF-TDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGN--LSFPNGVA 207 (359)
Q Consensus 137 ------~~~~~~~~~~l~~d~~g~~l~v-~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--~~~p~gia 207 (359)
....+..|++|++|++|+ ||| +|....... . .+......|+++++++++++.+... ...|+|++
T Consensus 465 g~~~~~~~~~fnsPDnL~fd~~G~-LWf~TD~~~~~~g-~-----~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGia 537 (592)
T 4a9v_A 465 GSSNITPQNMFNSPDGLGFDKAGR-LWILTDGDSSNAG-D-----FAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGIS 537 (592)
T ss_dssp CCTTCCTTTCCCCEEEEEECTTCC-EEEEECCCCCCSG-G-----GTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEE
T ss_pred CccCccccCccCCCCceEECCCCC-EEEEeCCCcCccc-c-----ccccCCceEEEEeCCCCeEEEEEeCCCCccccCCE
Confidence 012468899999999999 999 665421000 0 0111233799999988888877643 45689999
Q ss_pred EccCCCEEEEEec
Q 018242 208 LSEDGNYILLAET 220 (359)
Q Consensus 208 ~~~d~~~l~v~~~ 220 (359)
|+||+++|||+-.
T Consensus 538 fSPD~ktLfV~vQ 550 (592)
T 4a9v_A 538 FSPDQKTLFVGIQ 550 (592)
T ss_dssp ECTTSSEEEEEEE
T ss_pred ECCCCCEEEEEEe
Confidence 9999999999853
No 282
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.18 E-value=0.00014 Score=72.25 Aligned_cols=172 Identities=6% Similarity=-0.016 Sum_probs=93.4
Q ss_pred CceEEEccCCCeeEEecC---------CCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecC
Q 018242 36 PESLAFDALGEGPYTGVS---------DGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKT 106 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~---------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~ 106 (359)
..+++++|||+.+..+.. ++.|+.||.++++... ..........++++|+
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~---------------------~~~l~~~~~~~~~SPD 120 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR---------------------GNELPRPIQYLCWSPV 120 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC---------------------SSCCCSSBCCEEECSS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccc---------------------ceecCcccccceECCC
Confidence 678999999996665544 4789999998873200 0111123556889995
Q ss_pred CCeEEEEeCCCcEEEEeCCCCeEEEEeecCCCcc--------------ccccceEEEeCCCCEEEEEeCC-Cc---ccc-
Q 018242 107 NGDLYIADAYFGLLKVGPEGGLATAVATQSEGIP--------------FRFCNSLDIDQSTGIIYFTDSS-SQ---FQR- 167 (359)
Q Consensus 107 ~g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~l~~d~~g~~l~v~d~~-~~---~~~- 167 (359)
+..|..+. .+.|+.++..+++...+........ ......+.++|||++|.++... .. |..
T Consensus 121 G~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~ 199 (719)
T 1z68_A 121 GSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYS 199 (719)
T ss_dssp TTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEE
T ss_pred CCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEee
Confidence 44555553 4579999998877654321110000 0122479999999966665211 00 000
Q ss_pred ----ccc--eeee-----eecCCCceEEEEeCCCCcEE---EEe------CCCCCCceEEEccCCCEEEEEe-cCC--CE
Q 018242 168 ----RNH--ISVI-----LSGDKTGRLMKYDPATKQVT---VLL------GNLSFPNGVALSEDGNYILLAE-TTS--CR 224 (359)
Q Consensus 168 ----~~~--~~~~-----~~~~~~g~v~~~d~~~~~~~---~~~------~~~~~p~gia~~~d~~~l~v~~-~~~--~~ 224 (359)
..+ ...+ ........|+.+|.++++.. .+. ........++++||++.++... ... ..
T Consensus 200 ~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~ 279 (719)
T 1z68_A 200 YYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSV 279 (719)
T ss_dssp ECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEE
T ss_pred ccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEE
Confidence 000 0000 00011236888898876531 211 1112236789999976444322 222 35
Q ss_pred EEEEE
Q 018242 225 ILRYW 229 (359)
Q Consensus 225 i~~~~ 229 (359)
|+.++
T Consensus 280 l~~~d 284 (719)
T 1z68_A 280 LSICD 284 (719)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 88888
No 283
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.17 E-value=0.0028 Score=61.23 Aligned_cols=173 Identities=8% Similarity=0.013 Sum_probs=88.5
Q ss_pred EEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC---
Q 018242 39 LAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA--- 115 (359)
Q Consensus 39 i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~--- 115 (359)
++++ +++ +|+.+.++.|+.+|..+++...-....... ........| .+. ++.+|++..
T Consensus 111 ~~~~-~~~-v~v~~~dg~l~alD~~tG~~~W~~~~~~~~------------~~~~~~~~P---~v~--~g~v~vg~~~~~ 171 (571)
T 2ad6_A 111 LAYG-AGQ-IVKKQANGHLLALDAKTGKINWEVEVCDPK------------VGSTLTQAP---FVA--KDTVLMGCSGAE 171 (571)
T ss_dssp CEEE-TTE-EEEECTTSEEEEEETTTCCEEEEEECCCGG------------GTCBCCSCC---EEE--TTEEEEECBCGG
T ss_pred cEEE-CCE-EEEEeCCCEEEEEECCCCCEEEEecCCCCC------------ccceeccCC---EEE--CCEEEEEecCCc
Confidence 4443 455 889888899999999887644322111000 000111122 122 678888864
Q ss_pred ---CCcEEEEeCCCCeEEEEeecCCCc------c-------c--------------------ccc-ceEEEeCCCCEEEE
Q 018242 116 ---YFGLLKVGPEGGLATAVATQSEGI------P-------F--------------------RFC-NSLDIDQSTGIIYF 158 (359)
Q Consensus 116 ---~~~i~~~~~~~~~~~~~~~~~~~~------~-------~--------------------~~~-~~l~~d~~g~~l~v 158 (359)
.+.|+.+|.++|+..-........ + . ..+ ..+++|++.+.+|+
T Consensus 172 ~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~ 251 (571)
T 2ad6_A 172 LGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYY 251 (571)
T ss_dssp GTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEE
T ss_pred cCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEE
Confidence 345999999988765322211110 0 0 000 23678877555998
Q ss_pred EeCCCc-cccccceeeeeecCCCceEEEEeCCCCcEEEEeCC----------CCCCceEEEccCCC--EEEEEecCCCEE
Q 018242 159 TDSSSQ-FQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGN----------LSFPNGVALSEDGN--YILLAETTSCRI 225 (359)
Q Consensus 159 ~d~~~~-~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~----------~~~p~gia~~~d~~--~l~v~~~~~~~i 225 (359)
+..... |...... ......+.|+.+|+++++....... ...|.-.....+|+ .+++....++.+
T Consensus 252 ~~g~~~~~~~~~~~---gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l 328 (571)
T 2ad6_A 252 GSGNPAPWNETMRP---GDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGIL 328 (571)
T ss_dssp ECCCCSCSCGGGSC---SCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEE
T ss_pred ECCCCccccCCccC---CCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEE
Confidence 853210 1100000 0001124699999999988754321 11222222223564 344445566788
Q ss_pred EEEEcCCC
Q 018242 226 LRYWLKTS 233 (359)
Q Consensus 226 ~~~~~~~~ 233 (359)
+.+|....
T Consensus 329 ~~lD~~tG 336 (571)
T 2ad6_A 329 YTLNRENG 336 (571)
T ss_dssp EEEETTTC
T ss_pred EEEECCCC
Confidence 88886543
No 284
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.13 E-value=0.00018 Score=73.58 Aligned_cols=156 Identities=6% Similarity=-0.036 Sum_probs=103.3
Q ss_pred CceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC
Q 018242 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA 115 (359)
Q Consensus 36 p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~ 115 (359)
-.++++.+ |++++++..++.|..||..+++... .+. .......+++++++..++++..
T Consensus 61 V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~--------------------~~~-~~~~V~~v~~sp~g~~l~sgs~ 118 (902)
T 2oaj_A 61 IKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLT--------------------TVF-VPGKITSIDTDASLDWMLIGLQ 118 (902)
T ss_dssp EEEEEEET-TTEEEEEETTCEEEEEETTTCSEEE--------------------EEE-CSSCEEEEECCTTCSEEEEEET
T ss_pred EEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEE--------------------EEc-CCCCEEEEEECCCCCEEEEEcC
Confidence 45889999 8878888889999999998764221 111 1234678899996666777776
Q ss_pred CCcEEEEeCCCCeEEEEee-------cCCCccccccceEEEeCCC-CEEEEEeCCCccccccceeeeeecCCCceEEEEe
Q 018242 116 YFGLLKVGPEGGLATAVAT-------QSEGIPFRFCNSLDIDQST-GIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYD 187 (359)
Q Consensus 116 ~~~i~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~d~~g-~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 187 (359)
.+.|..+|.++++...+.. .........+..++++|++ +.+.++ ...+.| .||
T Consensus 119 dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g------------------~~dg~v-lWd 179 (902)
T 2oaj_A 119 NGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLIS------------------YEYVTL-TYS 179 (902)
T ss_dssp TSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEE------------------CSSCEE-EEE
T ss_pred CCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEE------------------eCCCcE-EEE
Confidence 6669999999887532211 0011122357889999974 424433 235678 999
Q ss_pred CCCCcEEEEeCC-------------------CCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC
Q 018242 188 PATKQVTVLLGN-------------------LSFPNGVALSEDGNYILLAETTSCRILRYWLKTS 233 (359)
Q Consensus 188 ~~~~~~~~~~~~-------------------~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~ 233 (359)
..+++....... ......++|+||++ .+++...++.|..||+...
T Consensus 180 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 180 LVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIHEDNSLVFWDANSG 243 (902)
T ss_dssp TTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEETTCCEEEEETTTC
T ss_pred CCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCCC
Confidence 887765433221 12357899999998 5666677889999998653
No 285
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.13 E-value=0.00027 Score=70.63 Aligned_cols=210 Identities=13% Similarity=0.058 Sum_probs=112.8
Q ss_pred ceEEEccCCCeeEEecC-C----CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEE
Q 018242 37 ESLAFDALGEGPYTGVS-D----GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLY 111 (359)
Q Consensus 37 ~~i~~~~~G~~l~~~~~-~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~ 111 (359)
.++.++|||+.+..+.. . ..|+.+|..+++..... ... ....+++++++ ..|+
T Consensus 166 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-------------------~~~--~~~~~~~wspD-~~l~ 223 (741)
T 1yr2_A 166 DAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-------------------LKW--VKFSGLAWLGN-DALL 223 (741)
T ss_dssp EEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-------------------EEE--EESCCCEESTT-SEEE
T ss_pred EeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-------------------CCC--ceeccEEEECC-CEEE
Confidence 36789999986544332 2 36999999988554321 000 01135678885 7777
Q ss_pred EEeCCC--------------cEEEEeCCCCeE--EEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeee
Q 018242 112 IADAYF--------------GLLKVGPEGGLA--TAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVIL 175 (359)
Q Consensus 112 v~~~~~--------------~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~ 175 (359)
++.... .|++++..++.. +.+... ...+ ....++.+++||++|.++....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~-~~~~-~~~~~~~~SpDG~~l~~~~~~~------------ 289 (741)
T 1yr2_A 224 YSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFAT-PELP-KRGHGASVSSDGRWVVITSSEG------------ 289 (741)
T ss_dssp EEECCCC--------CCCCCEEEEEETTSCGGGCEEEECC-TTCT-TCEEEEEECTTSCEEEEEEECT------------
T ss_pred EEEecCcccccccccCCCCCEEEEEECCCCchhCEEEecc-CCCC-eEEEEEEECCCCCEEEEEEEcc------------
Confidence 764322 377888766542 122221 1111 1345788999999676663210
Q ss_pred ecCCCceEEEEeCCCC--c-EEEEeCCCCCCceEEEccCCCEEEEEecC---CCEEEEEEcCCCCCcceeEeec-CCCCC
Q 018242 176 SGDKTGRLMKYDPATK--Q-VTVLLGNLSFPNGVALSEDGNYILLAETT---SCRILRYWLKTSKAGTIEIVAQ-LPGFP 248 (359)
Q Consensus 176 ~~~~~g~v~~~d~~~~--~-~~~~~~~~~~p~gia~~~d~~~l~v~~~~---~~~i~~~~~~~~~~~~~~~~~~-~~~~p 248 (359)
......|+.+|.+++ . .+.+.......... ++++++.+|+.... +..|++++++... ...+.+.. .....
T Consensus 290 -~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~l 366 (741)
T 1yr2_A 290 -TDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVVPESKDNL 366 (741)
T ss_dssp -TCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEECCCSSEE
T ss_pred -CCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEecCCCCeE
Confidence 012347888888766 4 55554333222333 45888888777543 4579999976532 22222222 22222
Q ss_pred CceEECCCCCEEEEEecCCCccccccccCCccceeeecCCc
Q 018242 249 DNIKRSPRGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPI 289 (359)
Q Consensus 249 ~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 289 (359)
.++.++ ++.++++....+. ..+..++..|+....++.
T Consensus 367 ~~~~~~-~~~lv~~~~~dg~---~~l~~~~~~g~~~~~l~~ 403 (741)
T 1yr2_A 367 ESVGIA-GNRLFASYIHDAK---SQVLAFDLDGKPAGAVSL 403 (741)
T ss_dssp EEEEEE-BTEEEEEEEETTE---EEEEEEETTSCEEEECBC
T ss_pred EEEEEE-CCEEEEEEEECCE---EEEEEEeCCCCceeeccC
Confidence 345555 4556665544332 113444445555555544
No 286
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=98.09 E-value=0.00013 Score=67.07 Aligned_cols=148 Identities=8% Similarity=-0.020 Sum_probs=84.7
Q ss_pred EccCCCeeEEecCCCEEEEEEcCC--cceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEec-CCCeEEEEeCCC
Q 018242 41 FDALGEGPYTGVSDGRIIKWHQDQ--RRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNK-TNGDLYIADAYF 117 (359)
Q Consensus 41 ~~~~G~~l~~~~~~~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~-~~g~l~v~~~~~ 117 (359)
.|.+|+ +|+++.. ++++++.+. ..|+.... . ........|++++ +.+.||++...+
T Consensus 19 ~d~~g~-l~vgt~~-Gl~~~~~~~~g~~W~~~~~-----------------~--~~~~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 19 ESGPVM-LLVATIK-GAWFLASDPARRTWELRGP-----------------V--FLGHTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp CCSCCE-EEEEETT-EEEEEEECTTSCSEEEEEE-----------------E--STTSEEEEEEECSSSTTCEEEEEEC-
T ss_pred CCCCCE-EEEEecC-ceEEEECCCCCCCceECCc-----------------c--CCCCceEEEEECCCCCCeEEEEecCC
Confidence 345666 9999975 588887654 45655420 0 1123356888887 467899987554
Q ss_pred ----cEEEEeCCCCeEEEEeec--CCCc-------cccccceEEEeC---CCCEEEEEeCCCccccccceeeeeecCCCc
Q 018242 118 ----GLLKVGPEGGLATAVATQ--SEGI-------PFRFCNSLDIDQ---STGIIYFTDSSSQFQRRNHISVILSGDKTG 181 (359)
Q Consensus 118 ----~i~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~l~~d~---~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g 181 (359)
+|++.+-.+..++.+... .... ....+..|++++ .++ +|++. ..+
T Consensus 78 ~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~-l~~g~------------------~~g 138 (394)
T 3b7f_A 78 HLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGT-WYAGT------------------SPQ 138 (394)
T ss_dssp -CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTC-EEEEE------------------ETT
T ss_pred CCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCE-EEEEe------------------cCC
Confidence 688876555555554321 1111 112345688886 566 99972 135
Q ss_pred eEEEEeCCCCcEEEEeCC-----------------C--CCCceEEEccC-CCEEEEEecCCCEEEEEE
Q 018242 182 RLMKYDPATKQVTVLLGN-----------------L--SFPNGVALSED-GNYILLAETTSCRILRYW 229 (359)
Q Consensus 182 ~v~~~d~~~~~~~~~~~~-----------------~--~~p~gia~~~d-~~~l~v~~~~~~~i~~~~ 229 (359)
+|++.+..+...+.+... . .....|+++|. .+.+|+... .+.|++.+
T Consensus 139 gl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~-~ggl~~s~ 205 (394)
T 3b7f_A 139 GLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS-SGGVFEST 205 (394)
T ss_dssp EEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE-TBEEEEES
T ss_pred cEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC-CCCEEEEC
Confidence 788887665555544210 0 01236777763 445777653 35677663
No 287
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.09 E-value=0.0023 Score=63.18 Aligned_cols=178 Identities=15% Similarity=0.124 Sum_probs=91.4
Q ss_pred eEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC--
Q 018242 38 SLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA-- 115 (359)
Q Consensus 38 ~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~-- 115 (359)
+++++ +++ +|+++.++.|+.+|..+++...-........ ........| .+. ++.+|++..
T Consensus 123 ~~a~~-~~~-v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~-----------~~~~~~~~p---~v~--~~~v~v~~~~~ 184 (677)
T 1kb0_A 123 GVALW-KGK-VYVGAWDGRLIALDAATGKEVWHQNTFEGQK-----------GSLTITGAP---RVF--KGKVIIGNGGA 184 (677)
T ss_dssp CCEEE-TTE-EEEECTTSEEEEEETTTCCEEEEEETTTTCC-----------SSCBCCSCC---EEE--TTEEEECCBCT
T ss_pred CceEE-CCE-EEEEcCCCEEEEEECCCCCEEeeecCCcCcC-----------cCcccccCc---EEE--CCEEEEEeccc
Confidence 45553 444 8999989999999998876443221110000 000111112 122 678888754
Q ss_pred ----CCcEEEEeCCCCeEEEEeecCCCcc----------------------------ccccceEEEeCCCCEEEEEeCCC
Q 018242 116 ----YFGLLKVGPEGGLATAVATQSEGIP----------------------------FRFCNSLDIDQSTGIIYFTDSSS 163 (359)
Q Consensus 116 ----~~~i~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~l~~d~~g~~l~v~d~~~ 163 (359)
.+.|+.+|.++|+..-......... ...-..+++|++++.+|++....
T Consensus 185 ~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~ 264 (677)
T 1kb0_A 185 EYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNG 264 (677)
T ss_dssp TTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCE
T ss_pred ccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCC
Confidence 2358999999888653222111100 00113578899888788874321
Q ss_pred c-cccccceeeeeecCCCceEEEEeCCCCcEEEEeCC----------CCCCceEEEccCCC--EEEEEecCCCEEEEEEc
Q 018242 164 Q-FQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGN----------LSFPNGVALSEDGN--YILLAETTSCRILRYWL 230 (359)
Q Consensus 164 ~-~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~----------~~~p~gia~~~d~~--~l~v~~~~~~~i~~~~~ 230 (359)
. |............-..+.|+.+|+++|+....... ...|.-.....||+ .+++....++.|+.+|.
T Consensus 265 ~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~ 344 (677)
T 1kb0_A 265 SPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDR 344 (677)
T ss_dssp ESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEET
T ss_pred ccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEEC
Confidence 0 10000000000011224699999999988764321 11232222223563 34555556778888886
Q ss_pred CCC
Q 018242 231 KTS 233 (359)
Q Consensus 231 ~~~ 233 (359)
...
T Consensus 345 ~tG 347 (677)
T 1kb0_A 345 TNG 347 (677)
T ss_dssp TTC
T ss_pred CCC
Confidence 544
No 288
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.06 E-value=0.00069 Score=67.15 Aligned_cols=210 Identities=10% Similarity=0.087 Sum_probs=110.7
Q ss_pred ceEEEccCCCeeE-EecCC----CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEE
Q 018242 37 ESLAFDALGEGPY-TGVSD----GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLY 111 (359)
Q Consensus 37 ~~i~~~~~G~~l~-~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~ 111 (359)
.+++++|||+.+. +.... ..|+.+|..+++..... +... ...+++++ ++..|+
T Consensus 132 ~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-------------------~~~~--k~~~~~Ws-Dg~~l~ 189 (693)
T 3iuj_A 132 DQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-------------------LKDV--KFSGISWL-GNEGFF 189 (693)
T ss_dssp EEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-------------------EEEE--ESCCCEEE-TTTEEE
T ss_pred EEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-------------------cCCc--eeccEEEe-CCCEEE
Confidence 3668999998544 33222 46899999988643321 1100 01345677 577777
Q ss_pred EEeCC-------------CcEEEEeCCCCeE--EEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeee
Q 018242 112 IADAY-------------FGLLKVGPEGGLA--TAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILS 176 (359)
Q Consensus 112 v~~~~-------------~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~ 176 (359)
++... ..|++.+..++.. +.+.. ..........++.+++||++|+++...
T Consensus 190 y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~-~~~~~~~~~~~~~~SpDg~~l~~~~~~-------------- 254 (693)
T 3iuj_A 190 YSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFG-AIPAQHHRYVGATVTEDDRFLLISAAN-------------- 254 (693)
T ss_dssp EEESSCCC-------CCCCEEEEEETTSCGGGCEEEES-CSGGGCCSEEEEEECTTSCEEEEEEES--------------
T ss_pred EEEecCcccccccccCCCcEEEEEECCCCcccceEEEe-cCCCCCeEEEEEEEcCCCCEEEEEEcc--------------
Confidence 76543 1378877766542 22222 111001123467899999977776322
Q ss_pred cCCCceEEEEeCCCC--cEEEEeCCCCCCceEEEccCCCEEEEEecC---CCEEEEEEcCCCCCcceeEeecCCCCCCce
Q 018242 177 GDKTGRLMKYDPATK--QVTVLLGNLSFPNGVALSEDGNYILLAETT---SCRILRYWLKTSKAGTIEIVAQLPGFPDNI 251 (359)
Q Consensus 177 ~~~~g~v~~~d~~~~--~~~~~~~~~~~p~gia~~~d~~~l~v~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i 251 (359)
......|+.+|.+++ ..+.+......... .++++++.+|+.... +.+|++++++.......+.+..- ..+.+
T Consensus 255 ~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~-~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~--~~~~~ 331 (693)
T 3iuj_A 255 STSGNRLYVKDLSQENAPLLTVQGDLDADVS-LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPE--RQQVL 331 (693)
T ss_dssp SSSCCEEEEEETTSTTCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC--CSSCE
T ss_pred CCCCcEEEEEECCCCCCceEEEeCCCCceEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecC--CCCEE
Confidence 112347999997654 44544433222222 266777777766544 36899999876433222333321 11223
Q ss_pred EECCCCC-EEEEEecCCCccccccccCCccceeeecCCc
Q 018242 252 KRSPRGG-FWVGIHSRRKGISKLVLSFPWIGNVLIKLPI 289 (359)
Q Consensus 252 ~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 289 (359)
.++++|+ |.++....+. ..+..++.+|.....++.
T Consensus 332 ~~s~~g~~lv~~~~~~g~---~~l~~~d~~g~~~~~l~~ 367 (693)
T 3iuj_A 332 TVHSGSGYLFAEYMVDAT---ARVEQFDYEGKRVREVAL 367 (693)
T ss_dssp EEEEETTEEEEEEEETTE---EEEEEECTTSCEEEEECC
T ss_pred EEEEECCEEEEEEEECCe---eEEEEEECCCCeeEEeec
Confidence 5556665 4444444331 114455555555555444
No 289
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.05 E-value=0.0053 Score=59.31 Aligned_cols=125 Identities=12% Similarity=0.120 Sum_probs=67.8
Q ss_pred CCCeeEEecC-CCEEEEEEc-CCcceEEEeecCCCCCCCCCCccccccccccc-C-CcceEEEEecCCCeEEEEeCCCcE
Q 018242 44 LGEGPYTGVS-DGRIIKWHQ-DQRRWLHFARTSPNRDGCEGAYEYDHAAKEHI-C-GRPLGLCFNKTNGDLYIADAYFGL 119 (359)
Q Consensus 44 ~G~~l~~~~~-~~~i~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~p~gi~~~~~~g~l~v~~~~~~i 119 (359)
+|+ +|+... ++.|+.+|. .+++...-...... .+ ..... + ....+++++ ++.+|+++..+.|
T Consensus 62 ~g~-vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~-------~~----~~~~~~~~~~~~~~~~~--~~~v~v~~~dg~l 127 (571)
T 2ad6_A 62 GDM-MYVHSAFPNNTYALNLNDPGKIVWQHKPKQD-------AS----TKAVMCCDVVDRGLAYG--AGQIVKKQANGHL 127 (571)
T ss_dssp TTE-EEEECSTTTCEEEEETTCTTSEEEEECCCCC-------GG----GGGGCTTCSCCCCCEEE--TTEEEEECTTSEE
T ss_pred CCE-EEEEeCCCCEEEEEeCCCCccEEEEEcCCCC-------cc----ccccccccccccccEEE--CCEEEEEeCCCEE
Confidence 555 888887 789999999 77764432211100 00 00000 0 011244554 7899999766679
Q ss_pred EEEeCCCCeEEEEeecCCCcc-ccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEE
Q 018242 120 LKVGPEGGLATAVATQSEGIP-FRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVL 196 (359)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 196 (359)
+.+|.++|+..-......... ......-++. +|. +|++..+..+ ...+.|+.+|+++++....
T Consensus 128 ~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g~-v~vg~~~~~~------------~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 128 LALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KDT-VLMGCSGAEL------------GVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp EEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTE-EEEECBCGGG------------TCCCEEEEEETTTCCEEEE
T ss_pred EEEECCCCCEEEEecCCCCCccceeccCCEEE-CCE-EEEEecCCcc------------CCCCEEEEEECCCCcEEEE
Confidence 999999988653222111000 0001111222 566 9988432110 1246799999998887653
No 290
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.05 E-value=0.00076 Score=61.83 Aligned_cols=191 Identities=11% Similarity=-0.004 Sum_probs=101.3
Q ss_pred ceEEEcc--------CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCC
Q 018242 37 ESLAFDA--------LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNG 108 (359)
Q Consensus 37 ~~i~~~~--------~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g 108 (359)
.++++.| ||+++..+..++.|..||..++.... ...........++++|++.
T Consensus 140 ~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~--------------------~~~~~~~~v~~v~~~p~~~ 199 (393)
T 4gq1_A 140 NDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPIL--------------------AGYPLSSPGISVQFRPSNP 199 (393)
T ss_dssp EEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEE--------------------EEEECSSCEEEEEEETTEE
T ss_pred EEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceee--------------------eecCCCCCcEEEEECCCCC
Confidence 4788876 78878888899999999986542111 1112223456899999555
Q ss_pred eEEE-EeCCCcEEEEeCCCCeEEEEeecCC---------------------CccccccceEEEe-CCCCEEEEEeCCCcc
Q 018242 109 DLYI-ADAYFGLLKVGPEGGLATAVATQSE---------------------GIPFRFCNSLDID-QSTGIIYFTDSSSQF 165 (359)
Q Consensus 109 ~l~v-~~~~~~i~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~l~~d-~~g~~l~v~d~~~~~ 165 (359)
++++ +...+.|..+|..+++......... .........+.+. ++|++++.+
T Consensus 200 ~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~------ 273 (393)
T 4gq1_A 200 NQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAM------ 273 (393)
T ss_dssp EEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEE------
T ss_pred ceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEE------
Confidence 5444 4444458888987765321100000 0011233455555 677733333
Q ss_pred ccccceeeeeecCCCceEEEEeCCCCcEEE-Ee------------------CCCCCCceEEEcc-CCCEEEEEecCCCEE
Q 018242 166 QRRNHISVILSGDKTGRLMKYDPATKQVTV-LL------------------GNLSFPNGVALSE-DGNYILLAETTSCRI 225 (359)
Q Consensus 166 ~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~-~~------------------~~~~~p~gia~~~-d~~~l~v~~~~~~~i 225 (359)
...+.+..+|..++.... +. .......+..+.+ .++.+.++...++.|
T Consensus 274 ------------s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V 341 (393)
T 4gq1_A 274 ------------CKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLI 341 (393)
T ss_dssp ------------CTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEE
T ss_pred ------------eCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEE
Confidence 223456666654332111 00 0001112233433 445566777888999
Q ss_pred EEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCC
Q 018242 226 LRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
..|+...+... ............++++++|+++++...++
T Consensus 342 ~lwd~~~~~~~--~~~~~~~~~V~svafspdG~~LA~as~~G 381 (393)
T 4gq1_A 342 QLINTYEKDSN--SIPIQLGMPIVDFCWHQDGSHLAIATEGS 381 (393)
T ss_dssp EEEETTCTTCC--EEEEECSSCEEEEEECTTSSEEEEEESSE
T ss_pred EEEECCCCcEE--EEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 99998654322 22222223346799999999877665544
No 291
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.99 E-value=0.0023 Score=57.69 Aligned_cols=73 Identities=8% Similarity=0.088 Sum_probs=52.2
Q ss_pred cccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCce-EEEEeCCCCcEEEEeC---CCCCCceEEEccCCCEEEE
Q 018242 142 RFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGR-LMKYDPATKQVTVLLG---NLSFPNGVALSEDGNYILL 217 (359)
Q Consensus 142 ~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~-v~~~d~~~~~~~~~~~---~~~~p~gia~~~d~~~l~v 217 (359)
..+..++++|+|+ +.++- +..+. |..||..+++...... .......++|+||++. ++
T Consensus 196 ~~v~~~~~s~~g~-~l~s~-----------------s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~-l~ 256 (355)
T 3vu4_A 196 NPIKMVRLNRKSD-MVATC-----------------SQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSK-LA 256 (355)
T ss_dssp SCEEEEEECTTSS-EEEEE-----------------ETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCE-EE
T ss_pred CceEEEEECCCCC-EEEEE-----------------eCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCE-EE
Confidence 3567899999999 55541 33566 8889988776544332 3445678999999985 55
Q ss_pred EecCCCEEEEEEcCCC
Q 018242 218 AETTSCRILRYWLKTS 233 (359)
Q Consensus 218 ~~~~~~~i~~~~~~~~ 233 (359)
+.+.++.|..|++...
T Consensus 257 s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 257 VVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEETTCEEEEEESSCC
T ss_pred EEECCCEEEEEEccCC
Confidence 5567789999998654
No 292
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.91 E-value=0.0014 Score=61.13 Aligned_cols=158 Identities=9% Similarity=-0.014 Sum_probs=95.0
Q ss_pred CCceEEEccCCCeeE----EecCCCEEEEEEcCCc-----c----eEEEeecCCCCCCCCCCcccccccccccCCcceEE
Q 018242 35 GPESLAFDALGEGPY----TGVSDGRIIKWHQDQR-----R----WLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGL 101 (359)
Q Consensus 35 ~p~~i~~~~~G~~l~----~~~~~~~i~~~d~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi 101 (359)
...+++++++|+.++ .+..++.|..||..+. + +..+. ...........+
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~------------------~~~~h~~~V~~v 155 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHK------------------LLKDAGGMVIDM 155 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEE------------------CCCSGGGSEEEE
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeee------------------ccCCCCCceEEE
Confidence 467999999999777 4556789999997543 0 00110 111122346789
Q ss_pred EEecCCCeEEE-EeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCC
Q 018242 102 CFNKTNGDLYI-ADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKT 180 (359)
Q Consensus 102 ~~~~~~g~l~v-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~ 180 (359)
+++++++++++ +...+.|..+|.+++....... . ....+..++++|+|++|+++ ...
T Consensus 156 ~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~--~--~~~~v~~v~wspdg~~lasg------------------s~d 213 (434)
T 2oit_A 156 KWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL--P--STVAVTSVCWSPKGKQLAVG------------------KQN 213 (434)
T ss_dssp EECSSCTTEEEEEETTSCEEEEEESSSEEEEEEE--C--GGGCEEEEEECTTSSCEEEE------------------ETT
T ss_pred EECCCCCCEEEEEECCCeEEEEEcCCCcceeecc--C--CCCceeEEEEcCCCCEEEEE------------------cCC
Confidence 99996466665 4545568889988774321111 1 12357889999999956555 235
Q ss_pred ceEEEEeCCCCcEEEEeCCCC-------CCceEEEccCCCEEEEEecCC------CEEEEEEcCC
Q 018242 181 GRLMKYDPATKQVTVLLGNLS-------FPNGVALSEDGNYILLAETTS------CRILRYWLKT 232 (359)
Q Consensus 181 g~v~~~d~~~~~~~~~~~~~~-------~p~gia~~~d~~~l~v~~~~~------~~i~~~~~~~ 232 (359)
+.|..||.+......+..... ....+++++++..+......+ ..+..|++..
T Consensus 214 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 214 GTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp SCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred CcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 679999987322323321111 235677887775443434333 2377888754
No 293
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.91 E-value=0.0047 Score=57.15 Aligned_cols=179 Identities=13% Similarity=0.103 Sum_probs=100.2
Q ss_pred ceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC
Q 018242 37 ESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY 116 (359)
Q Consensus 37 ~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~ 116 (359)
.++++ ++++++++..++.|..||..+++... .+.........+.++ ++.++.+...
T Consensus 177 ~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~--------------------~~~~h~~~v~~l~~~--~~~l~s~s~d 232 (435)
T 1p22_A 177 LCLQY--DERVIITGSSDSTVRVWDVNTGEMLN--------------------TLIHHCEAVLHLRFN--NGMMVTCSKD 232 (435)
T ss_dssp EEEEC--CSSEEEEEETTSCEEEEESSSCCEEE--------------------EECCCCSCEEEEECC--TTEEEEEETT
T ss_pred EEEEE--CCCEEEEEcCCCeEEEEECCCCcEEE--------------------EEcCCCCcEEEEEEc--CCEEEEeeCC
Confidence 34444 77778899999999999998764322 112222334566665 4567666666
Q ss_pred CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEE
Q 018242 117 FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVL 196 (359)
Q Consensus 117 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 196 (359)
+.|..+|..++..........+ ....+..+.+ ++++++.+ ...+.|..+|..+++....
T Consensus 233 g~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~s~------------------~~dg~i~vwd~~~~~~~~~ 291 (435)
T 1p22_A 233 RSIAVWDMASPTDITLRRVLVG-HRAAVNVVDF--DDKYIVSA------------------SGDRTIKVWNTSTCEFVRT 291 (435)
T ss_dssp SCEEEEECSSSSCCEEEEEECC-CSSCEEEEEE--ETTEEEEE------------------ETTSEEEEEETTTCCEEEE
T ss_pred CcEEEEeCCCCCCceeeeEecC-CCCcEEEEEe--CCCEEEEE------------------eCCCeEEEEECCcCcEEEE
Confidence 6688889876543211111111 1123455665 56635444 2356799999887765433
Q ss_pred -eCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECCCCCEEEEEecCC
Q 018242 197 -LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 267 (359)
Q Consensus 197 -~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~ 267 (359)
.........+++ +++ ++++...++.|..||+.... ....+.........+++ +|++.++....+
T Consensus 292 ~~~~~~~v~~~~~--~~~-~l~~g~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg 356 (435)
T 1p22_A 292 LNGHKRGIACLQY--RDR-LVVSGSSDNTIRLWDIECGA--CLRVLEGHEELVRCIRF--DNKRIVSGAYDG 356 (435)
T ss_dssp EECCSSCEEEEEE--ETT-EEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEC--CSSEEEEEETTS
T ss_pred EcCCCCcEEEEEe--CCC-EEEEEeCCCeEEEEECCCCC--EEEEEeCCcCcEEEEEe--cCCEEEEEeCCC
Confidence 233333445555 455 56666677899999986532 11222222222344555 566555444444
No 294
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.88 E-value=0.0003 Score=66.78 Aligned_cols=123 Identities=19% Similarity=0.298 Sum_probs=76.8
Q ss_pred CCCCCceEEEcc-CCCeeEEe-cC---------------------CCEEEEEEcCCc-------ceEEEeecCCCCCCCC
Q 018242 32 GAIGPESLAFDA-LGEGPYTG-VS---------------------DGRIIKWHQDQR-------RWLHFARTSPNRDGCE 81 (359)
Q Consensus 32 ~~~~p~~i~~~~-~G~~l~~~-~~---------------------~~~i~~~d~~~~-------~~~~~~~~~~~~~~~~ 81 (359)
.+.+||+++++| +|. +|++ ++ .|.|++|.+..+ +|..|....+ +....
T Consensus 382 ~mdRpEdi~v~p~~g~-vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~-p~~~~ 459 (592)
T 4a9v_A 382 RMDRPEWIVVSPKDGQ-VYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGN-PSVHA 459 (592)
T ss_dssp CEECEEEEEECTTTCC-EEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCC-TTTST
T ss_pred cccCccceeEcCCCCE-EEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccC-Ccccc
Confidence 346899999998 577 6654 32 278999987532 2444443211 11000
Q ss_pred CC--cccccccccccCCcceEEEEecCCCeEEEE-eCC------------CcEEEEeCCCCeEEEEeecCCCccccccce
Q 018242 82 GA--YEYDHAAKEHICGRPLGLCFNKTNGDLYIA-DAY------------FGLLKVGPEGGLATAVATQSEGIPFRFCNS 146 (359)
Q Consensus 82 ~~--~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~-~~~------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (359)
+. ++..-+........|..|+|++ +|+||++ +.. +.++++++++++++.+.... ....+++
T Consensus 460 ~~~~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P---~~aEpnG 535 (592)
T 4a9v_A 460 GTPKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP---IGCEVTG 535 (592)
T ss_dssp TSGGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC---TTCEEEE
T ss_pred cccccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC---CCccccC
Confidence 00 0000000112346689999999 8999995 431 25899999989887766421 2346899
Q ss_pred EEEeCCCCEEEEEe
Q 018242 147 LDIDQSTGIIYFTD 160 (359)
Q Consensus 147 l~~d~~g~~l~v~d 160 (359)
++++||+++|||+.
T Consensus 536 iafSPD~ktLfV~v 549 (592)
T 4a9v_A 536 ISFSPDQKTLFVGI 549 (592)
T ss_dssp EEECTTSSEEEEEE
T ss_pred CEECCCCCEEEEEE
Confidence 99999999999984
No 295
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=97.81 E-value=0.0038 Score=55.95 Aligned_cols=152 Identities=19% Similarity=0.149 Sum_probs=86.8
Q ss_pred eEEEcc---CCCeeEEecCCCEEEEEEcCCcce-EEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 38 SLAFDA---LGEGPYTGVSDGRIIKWHQDQRRW-LHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 38 ~i~~~~---~G~~l~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
.+++.+ +|.++..+..++.|..||.++++. +++... .........++|+| ++.+.++
T Consensus 183 ~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~------------------~~~v~~v~~vafSp-dG~~lvs 243 (356)
T 2w18_A 183 ILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHID------------------DSYQASVCHKAYSE-MGLLFIV 243 (356)
T ss_dssp EEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECC------------------C---CCCEEEEEEE-TTEEEEE
T ss_pred eEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCC------------------CcceeeeEEEEECC-CCCEEEE
Confidence 455665 678677778999999999998753 333100 00011234567888 6776643
Q ss_pred eC------------C-CcEEEEeCCCCeEEEEee-cCC-CccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecC
Q 018242 114 DA------------Y-FGLLKVGPEGGLATAVAT-QSE-GIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGD 178 (359)
Q Consensus 114 ~~------------~-~~i~~~~~~~~~~~~~~~-~~~-~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~ 178 (359)
.. . ..|..+++++++...... ..+ +... . -+..+.+|. +.++ +.
T Consensus 244 ~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~-~--~lsg~~sg~-~lAS-----------------gS 302 (356)
T 2w18_A 244 LSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAG-R--FLEGDVKDH-CAAA-----------------IL 302 (356)
T ss_dssp EC------------CCEEEEEEETTTTEEEEEEEECCCTTCCC-C--EEEEEEETT-EEEE-----------------EE
T ss_pred eccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcc-e--eEccccCCC-EEEE-----------------Ec
Confidence 11 1 236667888876532211 001 1100 0 112222344 3333 22
Q ss_pred CCceEEEEeCCCCcEEEEeC-CCCCCc-eEEEccCCCEEEEEecCCCEEEEEEc
Q 018242 179 KTGRLMKYDPATKQVTVLLG-NLSFPN-GVALSEDGNYILLAETTSCRILRYWL 230 (359)
Q Consensus 179 ~~g~v~~~d~~~~~~~~~~~-~~~~p~-gia~~~d~~~l~v~~~~~~~i~~~~~ 230 (359)
..+.|..+|..+++...... +...+. .++|+|||++ +++.+.+++|..|+.
T Consensus 303 ~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~-LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 303 TSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSH-LLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSE-EEEECTTSCEEEEEE
T ss_pred CCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCE-EEEEECCCcEEEecC
Confidence 35679999999887655433 333334 5899999984 566678899999984
No 296
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.81 E-value=0.028 Score=54.45 Aligned_cols=177 Identities=12% Similarity=0.027 Sum_probs=91.3
Q ss_pred ceEEEccCCCe----eEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEE
Q 018242 37 ESLAFDALGEG----PYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYI 112 (359)
Q Consensus 37 ~~i~~~~~G~~----l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v 112 (359)
.++++.+.+.. +|+.+.++.|+.+|..+++...-....... ........| .+. ++.+|+
T Consensus 109 ~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~------------~~~~~~ssP---~v~--~g~V~v 171 (599)
T 1w6s_A 109 RGLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIK------------VGSTLTIAP---YVV--KDKVII 171 (599)
T ss_dssp CCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGG------------GTCBCCSCC---EEE--TTEEEE
T ss_pred cceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCC------------ccceeecCC---EEE--CCEEEE
Confidence 35666433333 888888899999999888654432111000 000111122 122 678888
Q ss_pred EeC------CCcEEEEeCCCCeEEEEeecCCCcc---------c----------------------cc--c-ceEEEeCC
Q 018242 113 ADA------YFGLLKVGPEGGLATAVATQSEGIP---------F----------------------RF--C-NSLDIDQS 152 (359)
Q Consensus 113 ~~~------~~~i~~~~~~~~~~~~~~~~~~~~~---------~----------------------~~--~-~~l~~d~~ 152 (359)
+.. .+.|+.+|.++|+..-......... . .. . ..+++|++
T Consensus 172 g~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~ 251 (599)
T 1w6s_A 172 GSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPG 251 (599)
T ss_dssp CCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETT
T ss_pred EecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCC
Confidence 753 3458999999888643222111100 0 00 0 13578877
Q ss_pred CCEEEEEeCCC-ccccccceeeeeecCCCceEEEEeCCCCcEEEEeCCCC-------CCce-EEEc---cCCC--EEEEE
Q 018242 153 TGIIYFTDSSS-QFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLS-------FPNG-VALS---EDGN--YILLA 218 (359)
Q Consensus 153 g~~l~v~d~~~-~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~-------~p~g-ia~~---~d~~--~l~v~ 218 (359)
.+.+|++.... .|...... ......+.|+.+|+++++......... .+.. +.++ .+|+ .+++.
T Consensus 252 ~g~vy~g~g~~~p~~~~~r~---gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~ 328 (599)
T 1w6s_A 252 TNLIYFGTGNPAPWNETMRP---GDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTH 328 (599)
T ss_dssp TTEEEEECCCCSCSCGGGSC---SCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEE
T ss_pred CCEEEEeCCCCccccCcccC---CCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEE
Confidence 66689885321 11110000 001123579999999998876432211 1111 2222 3553 34555
Q ss_pred ecCCCEEEEEEcCCC
Q 018242 219 ETTSCRILRYWLKTS 233 (359)
Q Consensus 219 ~~~~~~i~~~~~~~~ 233 (359)
...++.++.+|....
T Consensus 329 ~~~~G~l~~lD~~tG 343 (599)
T 1w6s_A 329 PDRNGIVYTLDRTDG 343 (599)
T ss_dssp ECTTSEEEEEETTTC
T ss_pred ECCCcEEEEEECCCC
Confidence 566778888886543
No 297
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.81 E-value=0.0022 Score=60.19 Aligned_cols=157 Identities=14% Similarity=0.156 Sum_probs=78.7
Q ss_pred cceEEEEecCCCeEEEEeCC------------------CcEEEEeCCCCeE--E-EEee--cC----------CCccccc
Q 018242 97 RPLGLCFNKTNGDLYIADAY------------------FGLLKVGPEGGLA--T-AVAT--QS----------EGIPFRF 143 (359)
Q Consensus 97 ~p~gi~~~~~~g~l~v~~~~------------------~~i~~~~~~~~~~--~-~~~~--~~----------~~~~~~~ 143 (359)
....|+|++ +|.|||+... +.|+|+++++... . .+.. ++ -...+..
T Consensus 140 ~g~~l~fgp-DG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RN 218 (463)
T 2wg3_C 140 LGGQLLFGP-DGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHD 218 (463)
T ss_dssp CEEEEEECT-TSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSS
T ss_pred cCCcEeECC-CCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCC
Confidence 345799999 8999998421 1399999987310 0 0000 00 0113468
Q ss_pred cceEEEeCC-----CC-EEEEEeCCCccccccceeeeeecCCCc---eEEEEeCCCCcEEEEeCCCCCCceEEEccC---
Q 018242 144 CNSLDIDQS-----TG-IIYFTDSSSQFQRRNHISVILSGDKTG---RLMKYDPATKQVTVLLGNLSFPNGVALSED--- 211 (359)
Q Consensus 144 ~~~l~~d~~-----g~-~l~v~d~~~~~~~~~~~~~~~~~~~~g---~v~~~d~~~~~~~~~~~~~~~p~gia~~~d--- 211 (359)
|.++++|++ |+ ++|.+|.............+..+...| -++.+.+. ....|.|+++...
T Consensus 219 p~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei~~i~~G~~yG~~~P~~~~~~~---------~g~Ap~G~~~Y~G~~f 289 (463)
T 2wg3_C 219 PGRCAVDRHPTDININLTILCSDSNGKNRSSARILQIIKGKDYESEPSLLEFKPF---------SNGPLVGGFVYRGCQS 289 (463)
T ss_dssp CCBEEEESSCSSTTCSEEEEEECC------CEEEEEEC----CCSCCCCEECCC-------------CEEEEEECCCSSC
T ss_pred cceEEECCCCCCcccceEEEecccCCCCCCCCeEeeeccCCCCCCCCCeEEeeCC---------CCccccceEEEeCCCC
Confidence 999999997 54 266677521110001111110111111 01111110 1135677777432
Q ss_pred ----CCEEEEEecCCCEEEEEEcCCCCCc-ceeEee---------cCCCCCCceEECCCCCEEEEEec
Q 018242 212 ----GNYILLAETTSCRILRYWLKTSKAG-TIEIVA---------QLPGFPDNIKRSPRGGFWVGIHS 265 (359)
Q Consensus 212 ----~~~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~---------~~~~~p~~i~~d~~G~lwv~~~~ 265 (359)
++ +++++.. ++|+++.++..... ..+.+. ...+.|.++.++++|.||+++..
T Consensus 290 P~~~g~-~f~~~~~-g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~~~ 355 (463)
T 2wg3_C 290 ERLYGS-YVFGDRN-GNFLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGEDELGEVYILSSS 355 (463)
T ss_dssp TTTTTC-EEEEETT-SCEEEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEECTTCCEEEEEES
T ss_pred hhhcce-EEEecCC-CcEEEEEeCCCCceeeEEEeecCCcccccccccCcceEEEECCCCCEEEEecc
Confidence 33 6777665 78998887654222 222221 12345788999999999999873
No 298
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=97.80 E-value=0.013 Score=52.53 Aligned_cols=158 Identities=9% Similarity=-0.060 Sum_probs=80.8
Q ss_pred EEEEec--CCCeEEEEeCCC-cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeee
Q 018242 100 GLCFNK--TNGDLYIADAYF-GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILS 176 (359)
Q Consensus 100 gi~~~~--~~g~l~v~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~ 176 (359)
.++|++ .++.++++...+ .|..+|.++++....... ..........++++|+|+ +.++-+... ....+..
T Consensus 183 ~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g-~~~~v~~v~~vafSpdG~-~lvs~s~~~-----~~w~laS 255 (356)
T 2w18_A 183 ILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHI-DDSYQASVCHKAYSEMGL-LFIVLSHPC-----AKESESL 255 (356)
T ss_dssp EEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEEC-CC---CCCEEEEEEETTE-EEEEEC---------------
T ss_pred eEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcC-CCcceeeeEEEEECCCCC-EEEEeccCC-----Ccceeec
Confidence 445554 356777764444 477789998875332221 111223556678999998 555422100 0001123
Q ss_pred cCCCceEEEEeCCCCcEEEEe----CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCC-ce
Q 018242 177 GDKTGRLMKYDPATKQVTVLL----GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPD-NI 251 (359)
Q Consensus 177 ~~~~g~v~~~d~~~~~~~~~~----~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~-~i 251 (359)
+...+.|..+|+.+++..... .......-+..+.++. +.++.+.+++|..||+...+. ...+......+. .+
T Consensus 256 Gs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~-~lASgS~DgTIkIWDl~tGk~--l~tL~gH~~~vvs~v 332 (356)
T 2w18_A 256 RSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDH-CAAAILTSGTIAIWDLLLGQC--TALLPPVSDQHWSFV 332 (356)
T ss_dssp --CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETT-EEEEEETTSCEEEEETTTCSE--EEEECCC--CCCCEE
T ss_pred cCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCC-EEEEEcCCCcEEEEECCCCcE--EEEecCCCCCeEEEE
Confidence 345667888999887654322 1111111111222233 567777889999999865421 122222112233 37
Q ss_pred EECCCCCEEEEEecCC
Q 018242 252 KRSPRGGFWVGIHSRR 267 (359)
Q Consensus 252 ~~d~~G~lwv~~~~~~ 267 (359)
++.++|++.++....+
T Consensus 333 afSPDG~~LaSGS~D~ 348 (356)
T 2w18_A 333 KWSGTDSHLLAGQKDG 348 (356)
T ss_dssp EECSSSSEEEEECTTS
T ss_pred EECCCCCEEEEEECCC
Confidence 8999998776555444
No 299
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.76 E-value=0.0033 Score=62.11 Aligned_cols=82 Identities=21% Similarity=0.229 Sum_probs=50.7
Q ss_pred CceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCC--CceEECCCC
Q 018242 180 TGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFP--DNIKRSPRG 257 (359)
Q Consensus 180 ~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p--~~i~~d~~G 257 (359)
.+.|..+|+.+++............+..+..+++.+|+. +.++.++.||....+.. -.+ .++... .-+.+..+|
T Consensus 456 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG~~l--w~~-~~~~~~~~~p~~y~~~G 531 (677)
T 1kb0_A 456 FGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQG-TADGRLVAYHAATGEKL--WEA-PTGTGVVAAPSTYMVDG 531 (677)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEE--EEE-ECSSCCCSCCEEEEETT
T ss_pred ccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEE-CCCCcEEEEECCCCcee--eee-eCCCCcccCCEEEEeCC
Confidence 378999999999877644332234555666777777776 67889999997654221 111 122111 125555688
Q ss_pred CEEEEEec
Q 018242 258 GFWVGIHS 265 (359)
Q Consensus 258 ~lwv~~~~ 265 (359)
+.|++...
T Consensus 532 ~~~v~~~~ 539 (677)
T 1kb0_A 532 RQYVSVAV 539 (677)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEec
Confidence 88886643
No 300
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.75 E-value=0.024 Score=56.07 Aligned_cols=32 Identities=16% Similarity=0.195 Sum_probs=24.4
Q ss_pred EEEEecCCCeEEEEeCCC-------------------cEEEEeCCCCeEEE
Q 018242 100 GLCFNKTNGDLYIADAYF-------------------GLLKVGPEGGLATA 131 (359)
Q Consensus 100 gi~~~~~~g~l~v~~~~~-------------------~i~~~~~~~~~~~~ 131 (359)
.++++++.+.+|++.... .|+.+|.++|+..-
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W 289 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVW 289 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeE
Confidence 578898788888886432 28999999998654
No 301
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=97.74 E-value=0.0034 Score=57.50 Aligned_cols=152 Identities=11% Similarity=0.070 Sum_probs=85.9
Q ss_pred eEEEcc---CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCccccccccc-------ccCCcceEEEEecC-
Q 018242 38 SLAFDA---LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKE-------HICGRPLGLCFNKT- 106 (359)
Q Consensus 38 ~i~~~~---~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~p~gi~~~~~- 106 (359)
+|++++ .+. +|+++..++|++.+..+..|+.+...... |... ... ......+.|++++.
T Consensus 119 ~l~~~~~~~~~~-l~~g~~~ggl~~S~DgG~tW~~~~~~~~~------p~~~---~~~~~~~~g~~~~~~i~~i~~d~~~ 188 (394)
T 3b7f_A 119 WLTPGHASEPGT-WYAGTSPQGLFRSTDHGASWEPVAGFNDH------PMRR---AWTGGEQDGTPDGPKMHSILVDPRD 188 (394)
T ss_dssp EEEECCTTSTTC-EEEEEETTEEEEESSTTSBCEECHHHHTC------TTHH---HHHCCC----CCCCEEEEEEECTTC
T ss_pred EEEeCCCCCCCE-EEEEecCCcEEEEcCCCCCeEECcCccCC------cccc---ccccccccCCCCCCceeEEEECCCC
Confidence 577885 455 99988888999997777667765311000 0000 000 00112357888863
Q ss_pred CCeEEEEeCCCcEEEEeCCCCeEEEEeecCCC--cc------ccccceEEEeCC--CCEEEEEeCCCccccccceeeeee
Q 018242 107 NGDLYIADAYFGLLKVGPEGGLATAVATQSEG--IP------FRFCNSLDIDQS--TGIIYFTDSSSQFQRRNHISVILS 176 (359)
Q Consensus 107 ~g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~--~~------~~~~~~l~~d~~--g~~l~v~d~~~~~~~~~~~~~~~~ 176 (359)
.+.+|++...++|++.+-.+..++.+...... .+ ...+..|+++++ +. ||++.
T Consensus 189 ~~~l~vg~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~-l~vg~---------------- 251 (394)
T 3b7f_A 189 PKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDI-LYQQN---------------- 251 (394)
T ss_dssp TTCEEEEEETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTE-EEEEE----------------
T ss_pred CCEEEEEECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCE-EEEEc----------------
Confidence 47899997666788876666666554221110 00 123677899986 55 99983
Q ss_pred cCCCceEEEEeCCCCcEEEEeCCCCC-----CceEEEcc-CCCEEEEEe
Q 018242 177 GDKTGRLMKYDPATKQVTVLLGNLSF-----PNGVALSE-DGNYILLAE 219 (359)
Q Consensus 177 ~~~~g~v~~~d~~~~~~~~~~~~~~~-----p~gia~~~-d~~~l~v~~ 219 (359)
.++|++.+..+...+.+...+.. ...++++| +.+.+|+..
T Consensus 252 ---~~gl~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 252 ---HCGIYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp ---TTEEEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred ---CCeEEEeCCCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEe
Confidence 23688887665555544322222 13466665 344577763
No 302
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.73 E-value=0.022 Score=51.91 Aligned_cols=151 Identities=13% Similarity=-0.054 Sum_probs=84.4
Q ss_pred CCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEec-------CCCeEEEEeC-
Q 018242 44 LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNK-------TNGDLYIADA- 115 (359)
Q Consensus 44 ~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~-------~~g~l~v~~~- 115 (359)
+++++..+..++.|..||..+++........ .+.........++++| .+++++++..
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~---------------~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~ 164 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLG---------------GKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD 164 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEEC---------------TTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeec---------------ccCCCCCceEEEEEccccccccCCCCCEEEEEEC
Confidence 4455667788899999998876433221000 1222334567888875 2566666543
Q ss_pred CCcEEEEeCCCCeE-EEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEE
Q 018242 116 YFGLLKVGPEGGLA-TAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVT 194 (359)
Q Consensus 116 ~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 194 (359)
.+.|..+|..++.. ..+.. . ...+..++++|++..+.++- ...+.|..||..+++..
T Consensus 165 D~tv~~Wd~~~~~~~~~~~~-~----~~~v~~v~~~p~~~~~l~~~-----------------~~d~~v~~wd~~t~~~~ 222 (393)
T 4gq1_A 165 DCTLIIWRLTDEGPILAGYP-L----SSPGISVQFRPSNPNQLIVG-----------------ERNGNIRIFDWTLNLSA 222 (393)
T ss_dssp TSEEEEEEEETTEEEEEEEE-C----SSCEEEEEEETTEEEEEEEE-----------------ETTSEEEEEETTCCC--
T ss_pred CCeEEEEECCCCceeeeecC-C----CCCcEEEEECCCCCceEEec-----------------CCCCEEEEEECCCCccc
Confidence 34577888765543 22222 1 12456789999875344441 23456777887665432
Q ss_pred EEe--------------------------CCCCCCceEEEc-cCCCEEEEEecCCCEEEEEEcCC
Q 018242 195 VLL--------------------------GNLSFPNGVALS-EDGNYILLAETTSCRILRYWLKT 232 (359)
Q Consensus 195 ~~~--------------------------~~~~~p~gia~~-~d~~~l~v~~~~~~~i~~~~~~~ 232 (359)
... ........+++. +|++. +++...++.+..|++..
T Consensus 223 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~-l~s~s~d~~i~vwd~~~ 286 (393)
T 4gq1_A 223 EENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSG-ILAMCKSGAWLRWNLFA 286 (393)
T ss_dssp --------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCE-EEEECTTSEEEEEEC--
T ss_pred ccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCE-EEEEeCCCCEEEEECcc
Confidence 110 001123456665 78874 55667788999999754
No 303
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.73 E-value=0.041 Score=54.18 Aligned_cols=140 Identities=16% Similarity=0.158 Sum_probs=72.8
Q ss_pred eEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC-
Q 018242 38 SLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY- 116 (359)
Q Consensus 38 ~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~- 116 (359)
+++++ +++ +|+++.++.|+.+|..+++...-...... . ........| .+. ++.+|++...
T Consensus 112 ~~~~~-~~~-v~v~~~dg~l~alD~~tG~~~W~~~~~~~-------~-----~~~~~~~~P---~v~--~~~v~vg~~~~ 172 (668)
T 1kv9_A 112 GVALW-GDK-VYVGTLDGRLIALDAKTGKAIWSQQTTDP-------A-----KPYSITGAP---RVV--KGKVIIGNGGA 172 (668)
T ss_dssp CCEEE-BTE-EEEECTTSEEEEEETTTCCEEEEEECSCT-------T-----SSCBCCSCC---EEE--TTEEEECCBCT
T ss_pred ceEEE-CCE-EEEEcCCCEEEEEECCCCCEeeeeccCCC-------C-----CcceecCCC---EEE--CCEEEEeCCCC
Confidence 34553 445 88888889999999988764432211100 0 000111122 122 6788887532
Q ss_pred -----CcEEEEeCCCCeEEEEeecCCCccc---------------------------cccceEEEeCCCCEEEEEeCCCc
Q 018242 117 -----FGLLKVGPEGGLATAVATQSEGIPF---------------------------RFCNSLDIDQSTGIIYFTDSSSQ 164 (359)
Q Consensus 117 -----~~i~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~d~~g~~l~v~d~~~~ 164 (359)
+.|+.+|.++|+..-.....+..+. ..-..+++|++++.+|++.....
T Consensus 173 ~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~ 252 (668)
T 1kv9_A 173 EYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGS 252 (668)
T ss_dssp TTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEE
T ss_pred CcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCC
Confidence 3489999998886533221111000 00124688987766888843210
Q ss_pred -ccccccee-eeeecCCCceEEEEeCCCCcEEEEe
Q 018242 165 -FQRRNHIS-VILSGDKTGRLMKYDPATKQVTVLL 197 (359)
Q Consensus 165 -~~~~~~~~-~~~~~~~~g~v~~~d~~~~~~~~~~ 197 (359)
|... ... .....-..+.|+.+|+++|+.....
T Consensus 253 ~w~~~-~~~~~~gd~l~~~~v~AlD~~tG~~~W~~ 286 (668)
T 1kv9_A 253 PWNRE-VRSPGGGDNLYLSSILAIRPDTGKLAWHY 286 (668)
T ss_dssp SSCHH-HHSTTCCCCTTTTEEEEECTTTCCEEEEE
T ss_pred ccccC-CCCCCCCCceeeeeEEEEcCCCCceeeEe
Confidence 1100 000 0000111246999999999887643
No 304
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.70 E-value=0.0019 Score=60.14 Aligned_cols=167 Identities=10% Similarity=-0.073 Sum_probs=89.3
Q ss_pred ceEEEEecCCCeEEEEeCCCcEEEEeCCC-----------CeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccc
Q 018242 98 PLGLCFNKTNGDLYIADAYFGLLKVGPEG-----------GLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQ 166 (359)
Q Consensus 98 p~gi~~~~~~g~l~v~~~~~~i~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~ 166 (359)
..-++++++.+.++++.. +++..++... ...........-.....+..++++++|++|.++..
T Consensus 39 ~n~lavs~~~~~l~~~~~-dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~----- 112 (434)
T 2oit_A 39 SSLLAVSNKYGLVFAGGA-SGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMM----- 112 (434)
T ss_dssp CBCEEEETTTTEEEEEET-TEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEE-----
T ss_pred ccEEEEecCCCEEEEECC-CEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEe-----
Confidence 346888886677777654 4555543211 01110000000000124778999999996665210
Q ss_pred cccceeeeeecCCCceEEEEeCCCC-----c-------EEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCC
Q 018242 167 RRNHISVILSGDKTGRLMKYDPATK-----Q-------VTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSK 234 (359)
Q Consensus 167 ~~~~~~~~~~~~~~g~v~~~d~~~~-----~-------~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~ 234 (359)
.+...+.|..||..++ . ......+......++++|+...++++...++.|..||+....
T Consensus 113 ---------sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~ 183 (434)
T 2oit_A 113 ---------SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV 183 (434)
T ss_dssp ---------ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE
T ss_pred ---------ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc
Confidence 0123456777876432 0 111112234567899999844467777788999999986541
Q ss_pred CcceeEeecCCCCCCceEECCCCCEEEEEecCCCccccccccCCccceeeec
Q 018242 235 AGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFPWIGNVLIK 286 (359)
Q Consensus 235 ~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~g~~~~~ 286 (359)
..............++++++|+..++....+. +..++..++....
T Consensus 184 --~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~-----v~iwd~~~~~~~~ 228 (434)
T 2oit_A 184 --KVCATLPSTVAVTSVCWSPKGKQLAVGKQNGT-----VVQYLPTLQEKKV 228 (434)
T ss_dssp --EEEEEECGGGCEEEEEECTTSSCEEEEETTSC-----EEEECTTCCEEEE
T ss_pred --ceeeccCCCCceeEEEEcCCCCEEEEEcCCCc-----EEEEccCCccccc
Confidence 11111111233567899999975554444443 5556554444433
No 305
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.69 E-value=0.0074 Score=59.82 Aligned_cols=147 Identities=12% Similarity=-0.003 Sum_probs=83.3
Q ss_pred cCCCeEEEEe-CC----CcEEEEeCCCCeEEEEeecC--CCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeec
Q 018242 105 KTNGDLYIAD-AY----FGLLKVGPEGGLATAVATQS--EGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSG 177 (359)
Q Consensus 105 ~~~g~l~v~~-~~----~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~ 177 (359)
++++.++... .. ..|++.+..+++.+.+.+.. .........++.++|||++|.++... .+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~-------------~G 147 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSA-------------SG 147 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEE-------------TT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcC-------------CC
Confidence 4355555542 21 13788887766655554321 11111245678999999966555211 01
Q ss_pred CCCceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCC---------------CEEEEEEcCCCCCcceeEee
Q 018242 178 DKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTS---------------CRILRYWLKTSKAGTIEIVA 242 (359)
Q Consensus 178 ~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~---------------~~i~~~~~~~~~~~~~~~~~ 242 (359)
.....|+.+|.++++............+++++|||+.++++.... ..|+++++..+.......+.
T Consensus 148 ~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~ 227 (710)
T 2xdw_A 148 SDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAE 227 (710)
T ss_dssp CSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEEC
T ss_pred CceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEec
Confidence 122379999999887654321112246799999999888776543 24999998654322222222
Q ss_pred cC--CCCCCceEECCCCC-EEEEEe
Q 018242 243 QL--PGFPDNIKRSPRGG-FWVGIH 264 (359)
Q Consensus 243 ~~--~~~p~~i~~d~~G~-lwv~~~ 264 (359)
.. +....++.++++|+ |.++..
T Consensus 228 ~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 228 FPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp CTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 21 22234678899997 444443
No 306
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.69 E-value=0.0019 Score=53.70 Aligned_cols=115 Identities=17% Similarity=0.041 Sum_probs=66.8
Q ss_pred EEeeCCCCCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccc-cccCCcceEEEEec
Q 018242 27 QYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAK-EHICGRPLGLCFNK 105 (359)
Q Consensus 27 ~~~~~~~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~gi~~~~ 105 (359)
++-.++......++++|+|. ||+. .++.+++.++.+.+-....... . .+ ...-+.-..+.+|+
T Consensus 34 ~iG~~gw~~~~~laf~P~G~-LYaV-~~G~Ly~~~~~t~~~~~W~~s~------------t--~IG~~Gw~~F~a~~fD~ 97 (236)
T 1tl2_A 34 LIGKGGWSNFKFLFLSPGGE-LYGV-LNDKIYKGTPPTHDNDNWMGRA------------K--KIGNGGWNQFQFLFFDP 97 (236)
T ss_dssp EEESSSCTTCSEEEECTTSC-EEEE-ETTEEEEESCCCSTTCCHHHHC------------E--EEECSCGGGCSEEEECT
T ss_pred ccCccccccceeEEECCCcc-EEEE-eCCeEEEECCCCCCcccccccc------------c--EecccccccceEEEECC
Confidence 33333467788999999999 7766 7789999998652100000000 0 00 00001134688998
Q ss_pred CCCeEEEEeCCCcEEEEeCCCCeEEEEe---ecCCCccccccceEEEeCCCCEEEEEe
Q 018242 106 TNGDLYIADAYFGLLKVGPEGGLATAVA---TQSEGIPFRFCNSLDIDQSTGIIYFTD 160 (359)
Q Consensus 106 ~~g~l~v~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~d~~g~~l~v~d 160 (359)
+|.||+++ .+.|+|+++.+..-.... ..+....-.....|.++|+|. ||..+
T Consensus 98 -~G~LYav~-dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~ 152 (236)
T 1tl2_A 98 -NGYLYAVS-KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH 152 (236)
T ss_dssp -TSCEEEEE-TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE
T ss_pred -CCCEEEeC-CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe
Confidence 99999994 356999987432111110 000011123457899999999 99985
No 307
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.63 E-value=0.0051 Score=60.83 Aligned_cols=147 Identities=12% Similarity=0.015 Sum_probs=83.1
Q ss_pred cCCCeEEEEeC-C----CcEEEEeCCCCeEEEEeecCC--CccccccceEEEeCCCCEEEEEeCCCccccccceeeeeec
Q 018242 105 KTNGDLYIADA-Y----FGLLKVGPEGGLATAVATQSE--GIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSG 177 (359)
Q Consensus 105 ~~~g~l~v~~~-~----~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~ 177 (359)
++++.++.... . ..|++.+..++..+.+.+... ........++.++|||++|.++... .+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~-------------~G 143 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKP-------------NA 143 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEE-------------TT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECC-------------CC
Confidence 43556655532 2 237888877776655543211 0111245678999999966555211 11
Q ss_pred CCCceEEEEeCCCCcEEEEeCCCCC--CceEEEccCCCEEEEEecCC------------CEEEEEEcCCCCCcceeEeec
Q 018242 178 DKTGRLMKYDPATKQVTVLLGNLSF--PNGVALSEDGNYILLAETTS------------CRILRYWLKTSKAGTIEIVAQ 243 (359)
Q Consensus 178 ~~~g~v~~~d~~~~~~~~~~~~~~~--p~gia~~~d~~~l~v~~~~~------------~~i~~~~~~~~~~~~~~~~~~ 243 (359)
+....|+.+|.++++... ...... ..+++++|||+.++.+.... ..|+++++..+.......+..
T Consensus 144 ~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~ 222 (695)
T 2bkl_A 144 ADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHER 222 (695)
T ss_dssp CSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECC
T ss_pred CceEEEEEEECCCCCCcC-CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEec
Confidence 223579999999887530 111112 26899999999877776432 349999986543222222222
Q ss_pred C--CCCCCceEECCCCC-EEEEEec
Q 018242 244 L--PGFPDNIKRSPRGG-FWVGIHS 265 (359)
Q Consensus 244 ~--~~~p~~i~~d~~G~-lwv~~~~ 265 (359)
. +....++.++++|+ |.++...
T Consensus 223 ~~~~~~~~~~~~SpDG~~l~~~~~~ 247 (695)
T 2bkl_A 223 TGDPTTFLQSDLSRDGKYLFVYILR 247 (695)
T ss_dssp CCCTTCEEEEEECTTSCCEEEEEEE
T ss_pred CCCCEEEEEEEECCCCCEEEEEEeC
Confidence 1 11233578899996 5554443
No 308
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.63 E-value=0.0016 Score=58.13 Aligned_cols=160 Identities=7% Similarity=-0.072 Sum_probs=91.6
Q ss_pred CCCceEEEccCCCeeE-Eec--------CCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEe
Q 018242 34 IGPESLAFDALGEGPY-TGV--------SDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFN 104 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~-~~~--------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~ 104 (359)
....++.+ ||+.++ +.. ..+.|+.+|.++++.+.+ .....+.++
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-------------------------~~~~~~~~S 67 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-------------------------ENATMPRIS 67 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-------------------------ESCEEEEEC
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-------------------------ccCCCeEEC
Confidence 34456666 776443 321 146788999887643221 224567899
Q ss_pred cCCCeEEEEeCC---C--cEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccc-------ccee
Q 018242 105 KTNGDLYIADAY---F--GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRR-------NHIS 172 (359)
Q Consensus 105 ~~~g~l~v~~~~---~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~-------~~~~ 172 (359)
|++..|+++... . .|+.++.++++...+... + . +..+.++|||++|+++......... .+..
T Consensus 68 pDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~----~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~ 141 (347)
T 2gop_A 68 PDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA----K-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWF 141 (347)
T ss_dssp TTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE----S-E-EEEEEECTTSSEEEEEEECCCC---------CCCC-
T ss_pred CCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC----C-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceee
Confidence 955556555322 1 388999988876655331 1 1 6788999999977776321000000 0000
Q ss_pred e--eeecCCCceEEEEeCCCCcE-EEEeCCCCCCceEEEccCCCEEEEEecC--------CCEEEEEE
Q 018242 173 V--ILSGDKTGRLMKYDPATKQV-TVLLGNLSFPNGVALSEDGNYILLAETT--------SCRILRYW 229 (359)
Q Consensus 173 ~--~~~~~~~g~v~~~d~~~~~~-~~~~~~~~~p~gia~~~d~~~l~v~~~~--------~~~i~~~~ 229 (359)
. -........|++++..+++. +.+.. . ....++++||| .+|.+... ...|+.++
T Consensus 142 ~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 142 DDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp --------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE
T ss_pred cCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC
Confidence 0 00001134699999988876 54433 2 66788999999 66666443 33677777
No 309
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.57 E-value=0.065 Score=51.79 Aligned_cols=39 Identities=18% Similarity=0.212 Sum_probs=25.0
Q ss_pred eEEEEECC-CCCEEEEEEccCCceeeceEEEEEeCCEEEEec
Q 018242 306 GMAMRISE-QGNVLEILEEIGRKMWRSISEVEEKDGNLWIGS 346 (359)
Q Consensus 306 ~~~~~~~~-~g~~~~~~~~~~g~~~~~~~~~~~~~g~l~ig~ 346 (359)
..+.++|. .|+++..+..+.+.. ..+. ....+|++||+.
T Consensus 507 g~l~A~D~~tG~~lW~~~~~~g~~-a~P~-~y~~~G~qYv~~ 546 (582)
T 1flg_A 507 GYFKAFDAKSGKELWKFQTGSGIV-SPPI-TWEQDGEQYLGV 546 (582)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCC-SCCE-EEEETTEEEEEE
T ss_pred CcEEEEECCCCCEEEEecCCCCcc-cCce-EEEECCEEEEEE
Confidence 67888884 588888887655432 2222 223588989884
No 310
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.47 E-value=0.00018 Score=65.67 Aligned_cols=187 Identities=14% Similarity=0.063 Sum_probs=79.4
Q ss_pred CCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEe-CCCcEEEEe
Q 018242 45 GEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIAD-AYFGLLKVG 123 (359)
Q Consensus 45 G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~-~~~~i~~~~ 123 (359)
+.++|+++.++.|+.||..+++...-.. .......| +.. ++.++++. ..+.|+.+|
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~------------------~~~~~s~p----~~~-~g~~~v~~s~dg~l~a~d 65 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLK------------------EDPVLQVP----THV-EEPAFLPDPNDGSLYTLG 65 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEE------------------CCCSCCCC----------CCEEECTTTCCEEEC-
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEec------------------CCCceecc----eEc-CCCEEEEeCCCCEEEEEE
Confidence 4459999999999999998876443211 00010111 223 56666663 344688999
Q ss_pred CCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCCCCCC
Q 018242 124 PEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFP 203 (359)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p 203 (359)
.++|+...... .. .+.......++..++. +|++ ...+.|+.+|+++|+....... +
T Consensus 66 ~~tG~~~w~~~-~~-~~~~~~~sp~~~~~~~-v~~g------------------~~dg~v~a~D~~tG~~~w~~~~---~ 121 (369)
T 2hz6_A 66 SKNNEGLTKLP-FT-IPELVQASPCRSSDGI-LYMG------------------KKQDIWYVIDLLTGEKQQTLSS---A 121 (369)
T ss_dssp ----CCSEECS-CC-HHHHHTTCSCC------CCCC------------------EEEEEEEEECCC--------------
T ss_pred CCCCceeeeee-cc-CccccccCceEecCCE-EEEE------------------eCCCEEEEEECCCCcEEEEecC---C
Confidence 87775422111 11 0000001112223555 7765 2245799999998876543221 1
Q ss_pred ceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCCCCceEECC----CCCEEEEEecCCCccccccccCC-
Q 018242 204 NGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSP----RGGFWVGIHSRRKGISKLVLSFP- 278 (359)
Q Consensus 204 ~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~----~G~lwv~~~~~~~~~~~~~~~~~- 278 (359)
....++|+++.+|+.. .++.|+.||....+.......... ...+++. ++.+|+++..+. +..++
T Consensus 122 ~~~~~~p~~~~v~~~~-~dg~v~a~d~~tG~~~W~~~~~~~----~~~~~~~~~~~~~~v~~~~~dg~------v~a~d~ 190 (369)
T 2hz6_A 122 FADSLSPSTSLLYLGR-TEYTITMYDTKTRELRWNATYFDY----AASLPEDDVDYKMSHFVSNGDGL------VVTVDS 190 (369)
T ss_dssp -----------EEEEE-EEEEEECCCSSSSSCCCEEEEEEE----CCBCCCCCTTCCCCEEEEETSCE------EEEECT
T ss_pred CcccccccCCEEEEEe-cCCEEEEEECCCCCEEEeEecccc----cCccccCCccccceEEEECCCCE------EEEEEC
Confidence 1234456666677764 457899998765433222111111 1122322 367888765433 55554
Q ss_pred ccceeeecCCc
Q 018242 279 WIGNVLIKLPI 289 (359)
Q Consensus 279 ~~g~~~~~~~~ 289 (359)
.+|+.+.+...
T Consensus 191 ~tG~~~W~~~~ 201 (369)
T 2hz6_A 191 ESGDVLWIQNY 201 (369)
T ss_dssp TTCCEEEEEEC
T ss_pred CCCcEEEEecC
Confidence 47777665443
No 311
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.46 E-value=0.025 Score=55.92 Aligned_cols=82 Identities=21% Similarity=0.359 Sum_probs=49.4
Q ss_pred CceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEee-cCCC--CCCceEECCC
Q 018242 180 TGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA-QLPG--FPDNIKRSPR 256 (359)
Q Consensus 180 ~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~--~p~~i~~d~~ 256 (359)
.+.|..+|+.+++............+-.+...+..+|+. +.++.|+.||.+..+. .+. .++. ...-+.+..+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-t~dg~l~a~D~~tG~~----lw~~~~~~~~~~~p~ty~~~ 528 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEG-SADGRVIAYAADTGEK----LWEQPAASGVMAAPVTYSVD 528 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCE----EEEEECSSCCCSCCEEEEET
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEE-CCCCcEEEEECCCCcc----ceeeeCCCCcccCceEEEEC
Confidence 377999999999877543222212333555566656665 6788999999765422 121 2221 1122666678
Q ss_pred CCEEEEEecC
Q 018242 257 GGFWVGIHSR 266 (359)
Q Consensus 257 G~lwv~~~~~ 266 (359)
|+.||+...+
T Consensus 529 G~qyv~~~~G 538 (689)
T 1yiq_A 529 GEQYVTFMAG 538 (689)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 9999876543
No 312
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.43 E-value=0.058 Score=47.91 Aligned_cols=178 Identities=11% Similarity=0.086 Sum_probs=93.7
Q ss_pred ceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC
Q 018242 37 ESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY 116 (359)
Q Consensus 37 ~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~ 116 (359)
.+|.+++ ++ +|+....+.|++-.-.+..|+..... ....+.+..|++.+ ++++|++...
T Consensus 83 ~~i~~~~-~~-~~~~g~~g~i~~S~DgG~tW~~~~~~------------------~~~~~~~~~i~~~~-~~~~~~~~~~ 141 (327)
T 2xbg_A 83 NSVSFQG-NE-GWIVGEPPIMLHTTDGGQSWSQIPLD------------------PKLPGSPRLIKALG-NGSAEMITNV 141 (327)
T ss_dssp EEEEEET-TE-EEEEEETTEEEEESSTTSSCEECCCC------------------TTCSSCEEEEEEEE-TTEEEEEETT
T ss_pred EEEEecC-Ce-EEEEECCCeEEEECCCCCCceECccc------------------cCCCCCeEEEEEEC-CCCEEEEeCC
Confidence 3677764 55 66655557777754334445543210 01112356777766 7888888755
Q ss_pred CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCC-CCcEEE
Q 018242 117 FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPA-TKQVTV 195 (359)
Q Consensus 117 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~-~~~~~~ 195 (359)
++|++-.-.+...+.+.... ...+..++++++++ +|+.. ..+.+++-+.. +...+.
T Consensus 142 g~v~~S~DgG~tW~~~~~~~----~~~~~~~~~~~~~~-~~~~g------------------~~G~~~~S~d~gG~tW~~ 198 (327)
T 2xbg_A 142 GAIYRTKDSGKNWQALVQEA----IGVMRNLNRSPSGE-YVAVS------------------SRGSFYSTWEPGQTAWEP 198 (327)
T ss_dssp CCEEEESSTTSSEEEEECSC----CCCEEEEEECTTSC-EEEEE------------------TTSSEEEEECTTCSSCEE
T ss_pred ccEEEEcCCCCCCEEeecCC----CcceEEEEEcCCCc-EEEEE------------------CCCcEEEEeCCCCCceeE
Confidence 55766543344555543211 12456788899988 77662 13457765433 233333
Q ss_pred EeCC-CCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec--CCCCC-----CceEECCCCCEEEEEec
Q 018242 196 LLGN-LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ--LPGFP-----DNIKRSPRGGFWVGIHS 265 (359)
Q Consensus 196 ~~~~-~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~p-----~~i~~d~~G~lwv~~~~ 265 (359)
+... ......++++++++ +|+.. ..+.+++...+.. +.+.. .+.++ ..+++++++.+|++...
T Consensus 199 ~~~~~~~~~~~~~~~~~g~-~~~~~-~~G~~~~s~~D~G-----~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~ 269 (327)
T 2xbg_A 199 HNRTTSRRLHNMGFTPDGR-LWMIV-NGGKIAFSDPDNS-----ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA 269 (327)
T ss_dssp EECCSSSCEEEEEECTTSC-EEEEE-TTTEEEEEETTEE-----EEECCCBCTTSSCCSCEEEEEESSSSCEEEEEST
T ss_pred CCCCCCCccceeEECCCCC-EEEEe-CCceEEEecCCCC-----CeeEeccCCcccCCcceEEEEecCCCEEEEEeCC
Confidence 3221 22345777888876 56554 3456665432211 12222 11111 23566777888887653
No 313
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.43 E-value=0.045 Score=52.89 Aligned_cols=82 Identities=18% Similarity=0.135 Sum_probs=47.8
Q ss_pred CceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEee-cCCCCC--CceEECCC
Q 018242 180 TGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA-QLPGFP--DNIKRSPR 256 (359)
Q Consensus 180 ~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~p--~~i~~d~~ 256 (359)
.+.|+.+|+.+++............+-.+...+..+|+ .+.++.|+.||.+..+. .+. .++... .-+.+..+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~-g~~dg~l~A~D~~tG~~----lW~~~~~~g~~a~P~~y~~~ 539 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFT-GTGDGYFKAFDAKSGKE----LWKFQTGSGIVSPPITWEQD 539 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEE-ECTTSEEEEEETTTCCE----EEEEECSSCCCSCCEEEEET
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEE-ECCCCcEEEEECCCCCE----EEEecCCCCcccCceEEEEC
Confidence 57899999999987754322111222222234555666 45678999999765422 121 222211 12666678
Q ss_pred CCEEEEEecC
Q 018242 257 GGFWVGIHSR 266 (359)
Q Consensus 257 G~lwv~~~~~ 266 (359)
|+.||+...+
T Consensus 540 G~qYv~~~~G 549 (582)
T 1flg_A 540 GEQYLGVTVG 549 (582)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEcc
Confidence 9999977654
No 314
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.41 E-value=0.041 Score=54.18 Aligned_cols=81 Identities=20% Similarity=0.232 Sum_probs=47.8
Q ss_pred ceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeecCCCC--CCceEECCCCC
Q 018242 181 GRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGF--PDNIKRSPRGG 258 (359)
Q Consensus 181 g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--p~~i~~d~~G~ 258 (359)
+.|+.+|+.+++............+-.+...+..+|+. +.++.|+.+|.+..+.. -.+ .++.. ..-+....+|+
T Consensus 438 g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g-~~dg~l~a~d~~tG~~l--~~~-~~~~~~~~~p~~~~~~G~ 513 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQG-TAAGQMHAYSADKGEAL--WQF-EAQSGIVAAPMTFELAGR 513 (668)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEE--EEE-ECSSCCCSCCEEEEETTE
T ss_pred ceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEE-CCcccchhhhhhcChhh--eEe-cCCCCcccCceEEEECCE
Confidence 78999999999877543322223444555566667776 67789999997644221 111 12211 11244445788
Q ss_pred EEEEEec
Q 018242 259 FWVGIHS 265 (359)
Q Consensus 259 lwv~~~~ 265 (359)
+|++...
T Consensus 514 ~yva~~~ 520 (668)
T 1kv9_A 514 QYVAIMA 520 (668)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 8886654
No 315
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.40 E-value=0.017 Score=57.57 Aligned_cols=146 Identities=9% Similarity=0.006 Sum_probs=79.4
Q ss_pred cCCCeEEEEe-CC----CcEEEEeCC---CCeEEEEeecCC--CccccccceEEEeCCCCEEEEEeCCCccccccceeee
Q 018242 105 KTNGDLYIAD-AY----FGLLKVGPE---GGLATAVATQSE--GIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVI 174 (359)
Q Consensus 105 ~~~g~l~v~~-~~----~~i~~~~~~---~~~~~~~~~~~~--~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~ 174 (359)
++++.++... .. ..|++.+.. +++.+.+.+... ........++.++|||++|.++...
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~------------ 183 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQD------------ 183 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEE------------
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcC------------
Confidence 5355555542 22 236788876 666555533211 1011245678999999966555211
Q ss_pred eecCCCceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCC-------------EEEEEEcCCCCCcceeEe
Q 018242 175 LSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSC-------------RILRYWLKTSKAGTIEIV 241 (359)
Q Consensus 175 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~-------------~i~~~~~~~~~~~~~~~~ 241 (359)
.+.....|+.+|.++++............+++++|| +.++++..... .|+++++..+.......+
T Consensus 184 -~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~ 261 (741)
T 1yr2_A 184 -GGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVF 261 (741)
T ss_dssp -TTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEE
T ss_pred -CCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEe
Confidence 011124699999998876543111111257899999 88877764432 588888754432222222
Q ss_pred ecCC--CCCCceEECCCCC-EEEEEe
Q 018242 242 AQLP--GFPDNIKRSPRGG-FWVGIH 264 (359)
Q Consensus 242 ~~~~--~~p~~i~~d~~G~-lwv~~~ 264 (359)
.... ....++.+++||+ |.++..
T Consensus 262 ~~~~~~~~~~~~~~SpDG~~l~~~~~ 287 (741)
T 1yr2_A 262 ATPELPKRGHGASVSSDGRWVVITSS 287 (741)
T ss_dssp CCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred ccCCCCeEEEEEEECCCCCEEEEEEE
Confidence 2211 1234578899997 444443
No 316
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.33 E-value=0.089 Score=50.97 Aligned_cols=81 Identities=14% Similarity=0.160 Sum_probs=47.3
Q ss_pred CceEEEEeCCCCcEEEEeC-CCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEee-cCCCC--CCceEECC
Q 018242 180 TGRLMKYDPATKQVTVLLG-NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA-QLPGF--PDNIKRSP 255 (359)
Q Consensus 180 ~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~--p~~i~~d~ 255 (359)
.|.|+.+|+.+++...... ......+ .+...+..+|+. +.++.|+.||.+..+. .+. .++.. -.-+....
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~~~~~~g-~~~tagg~vf~g-t~dg~l~A~D~~tG~~----lW~~~l~~g~~~~P~~y~~ 525 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMERFAVWGG-TMATAGDLVFYG-TLDGYLKARDSDTGDL----LWKFKIPSGAIGYPMTYTH 525 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSB-CEEETTTEEEEE-CTTSEEEEEETTTCCE----EEEEECSSCCCSCCEEEEE
T ss_pred cCeEEEEECCCCCEEeEecCCCCccCc-ceEecCCEEEEE-CCCCeEEEEECCCCCE----EEEeeCCCCcEeccEEEEe
Confidence 4789999999998775432 2221123 223345556764 5678999999765432 221 23221 11155556
Q ss_pred CCCEEEEEecC
Q 018242 256 RGGFWVGIHSR 266 (359)
Q Consensus 256 ~G~lwv~~~~~ 266 (359)
+|++||+...+
T Consensus 526 ~G~qyv~~~~G 536 (599)
T 1w6s_A 526 KGTQYVAIYYG 536 (599)
T ss_dssp TTEEEEEEEEC
T ss_pred CCEEEEEEEcc
Confidence 89999876654
No 317
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.18 E-value=0.0063 Score=58.57 Aligned_cols=116 Identities=14% Similarity=0.212 Sum_probs=74.4
Q ss_pred cceEEEEecCCCeEEEEeCC----------------------CcEEEEeCCCCe-------EEEEee--cC---------
Q 018242 97 RPLGLCFNKTNGDLYIADAY----------------------FGLLKVGPEGGL-------ATAVAT--QS--------- 136 (359)
Q Consensus 97 ~p~gi~~~~~~g~l~v~~~~----------------------~~i~~~~~~~~~-------~~~~~~--~~--------- 136 (359)
+|-++.+++.++++|++... +.|++++++.+. +..+.. ..
T Consensus 385 RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~~~ 464 (592)
T 3zwu_A 385 RPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPKG 464 (592)
T ss_dssp CEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGGG
T ss_pred ccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccccccc
Confidence 46789999889999998432 238888765331 111111 00
Q ss_pred ------CCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCC--CCCCceEEE
Q 018242 137 ------EGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGN--LSFPNGVAL 208 (359)
Q Consensus 137 ------~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--~~~p~gia~ 208 (359)
....+..|..|++|++|+ |||++.+..-....+ .......++.+++.++++..+... .....|++|
T Consensus 465 ~~~~~~~~~~f~~PDNL~fd~~G~-LwI~eDg~~~~~~~~-----~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~f 538 (592)
T 3zwu_A 465 GSSNITPQNMFNSPDGLGFDKAGR-LWILTDGDSSNAGDF-----AGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISF 538 (592)
T ss_dssp CCTTCCTTTCCCCEEEEEECTTCC-EEEEECCCCCCSGGG-----TTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEE
T ss_pred cccccCCCCCccCCcceEECCCCC-EEEEecCCCcccccc-----cccccceEEEEeCCCCeEEEEEeCCCCccCcCeeE
Confidence 012356789999999999 999976532100000 001123588899988888877643 234569999
Q ss_pred ccCCCEEEEE
Q 018242 209 SEDGNYILLA 218 (359)
Q Consensus 209 ~~d~~~l~v~ 218 (359)
+||+++||+.
T Consensus 539 spDg~tlfvn 548 (592)
T 3zwu_A 539 SPDQKTLFVG 548 (592)
T ss_dssp CTTSSEEEEE
T ss_pred CCCCCEEEEE
Confidence 9999998886
No 318
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.13 E-value=0.011 Score=49.07 Aligned_cols=136 Identities=15% Similarity=0.083 Sum_probs=81.6
Q ss_pred cceEEEEecCCCeEEEEeCCCcEEEEeCCCC-------eEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCcccccc
Q 018242 97 RPLGLCFNKTNGDLYIADAYFGLLKVGPEGG-------LATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRN 169 (359)
Q Consensus 97 ~p~gi~~~~~~g~l~v~~~~~~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~ 169 (359)
....++++| +|.||.. ..+.|+++++.+. ..+.+-. ........+.+|++|. ||+..
T Consensus 42 ~~~~laf~P-~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~----~Gw~~F~a~~fD~~G~-LYav~--------- 105 (236)
T 1tl2_A 42 NFKFLFLSP-GGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGN----GGWNQFQFLFFDPNGY-LYAVS--------- 105 (236)
T ss_dssp TCSEEEECT-TSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEEC----SCGGGCSEEEECTTSC-EEEEE---------
T ss_pred cceeEEECC-CccEEEE-eCCeEEEECCCCCCcccccccccEecc----cccccceEEEECCCCC-EEEeC---------
Confidence 345899999 9999998 4556999998652 2122211 0122356799999999 99982
Q ss_pred ceeeeeecCCCceEEEEeCCCCcE-------EEEe-CCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCc-----
Q 018242 170 HISVILSGDKTGRLMKYDPATKQV-------TVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAG----- 236 (359)
Q Consensus 170 ~~~~~~~~~~~g~v~~~d~~~~~~-------~~~~-~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~----- 236 (359)
.|.|+++++.+..- ..+- .+...-..+.++|+|. ||... ++.+++.. .+....
T Consensus 106 ----------dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~--dg~lyr~~-~P~~~~~~wl~ 171 (236)
T 1tl2_A 106 ----------KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH--GQQFYKAL-PPVSNQDNWLA 171 (236)
T ss_dssp ----------TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--TTEEEEEC-CCSSTTCCHHH
T ss_pred ----------CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe--CCcEEecC-CCCCCCccccc
Confidence 36899999843211 1111 1223346788999996 78776 56677632 221111
Q ss_pred ceeEeecCCC--CCCceEECCCCCEEEEE
Q 018242 237 TIEIVAQLPG--FPDNIKRSPRGGFWVGI 263 (359)
Q Consensus 237 ~~~~~~~~~~--~p~~i~~d~~G~lwv~~ 263 (359)
....+.. .+ .-.-+.++++|+||..+
T Consensus 172 ~~~~~g~-~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 172 RATKIGQ-GGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp HCEEEES-SSGGGEEEEEECTTSCEEEEE
T ss_pred ccceecc-CCcceEEEEEECCCCcEEEEe
Confidence 0111110 11 11126689999999988
No 319
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.88 E-value=0.025 Score=54.40 Aligned_cols=123 Identities=19% Similarity=0.271 Sum_probs=74.7
Q ss_pred CCCCCceEEEcc-CCCeeEEecC---------------------CCEEEEEEcCCc-------ceEEEeecCCCCCCCCC
Q 018242 32 GAIGPESLAFDA-LGEGPYTGVS---------------------DGRIIKWHQDQR-------RWLHFARTSPNRDGCEG 82 (359)
Q Consensus 32 ~~~~p~~i~~~~-~G~~l~~~~~---------------------~~~i~~~d~~~~-------~~~~~~~~~~~~~~~~~ 82 (359)
.+..||++.+++ +|.++++.++ .|.|++|+++.+ +|..+.... .+.....
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g-~p~~~~~ 460 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAG-NPSVHAG 460 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECC-CTTTSTT
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEecc-Ccccccc
Confidence 577999999997 6784444442 268999987543 233332211 0000000
Q ss_pred -Ccc-cccccccccCCcceEEEEecCCCeEEEEeCC-------------CcEEEEeCCCCeEEEEeecCCCccccccceE
Q 018242 83 -AYE-YDHAAKEHICGRPLGLCFNKTNGDLYIADAY-------------FGLLKVGPEGGLATAVATQSEGIPFRFCNSL 147 (359)
Q Consensus 83 -~~~-~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~-------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 147 (359)
+.+ ..-+.-......|..|+|++ .|+|||+... +.+..+++.++++.++..... ...+.++
T Consensus 461 ~~~~~~~~~~~~~~f~~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~---gaE~TG~ 536 (592)
T 3zwu_A 461 TPKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI---GCEVTGI 536 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCT---TCEEEEE
T ss_pred cccccccccCCCCCccCCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCC---CccCcCe
Confidence 000 00000012235688999999 8999999643 237778888898887765322 2346689
Q ss_pred EEeCCCCEEEEE
Q 018242 148 DIDQSTGIIYFT 159 (359)
Q Consensus 148 ~~d~~g~~l~v~ 159 (359)
+++||+++|||.
T Consensus 537 ~fspDg~tlfvn 548 (592)
T 3zwu_A 537 SFSPDQKTLFVG 548 (592)
T ss_dssp EECTTSSEEEEE
T ss_pred eECCCCCEEEEE
Confidence 999999988887
No 320
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.59 E-value=0.36 Score=47.24 Aligned_cols=103 Identities=10% Similarity=-0.029 Sum_probs=62.1
Q ss_pred CCceEEEcc-CCCeeEEecCC-----------CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEE
Q 018242 35 GPESLAFDA-LGEGPYTGVSD-----------GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLC 102 (359)
Q Consensus 35 ~p~~i~~~~-~G~~l~~~~~~-----------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 102 (359)
.+...++.+ +|+++.++..+ ..+.+||+.+++|+.....+ ......-.+.+
T Consensus 187 ~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~-----------------~~~~~~~~~~~ 249 (656)
T 1k3i_A 187 VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTV-----------------TKHDMFCPGIS 249 (656)
T ss_dssp CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEE-----------------CSCCCSSCEEE
T ss_pred CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccC-----------------CCCCCcccccc
Confidence 566778777 78855554321 15889999998776543111 00001122466
Q ss_pred EecCCCeEEEEeCC--CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEE
Q 018242 103 FNKTNGDLYIADAY--FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFT 159 (359)
Q Consensus 103 ~~~~~g~l~v~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~ 159 (359)
+.. +++||+.... ..+.+||+.+++++.+.. .+ ....-+.+++-++|+ ||+.
T Consensus 250 ~~~-~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~-~~--~~R~~~s~~~~~dg~-iyv~ 303 (656)
T 1k3i_A 250 MDG-NGQIVVTGGNDAKKTSLYDSSSDSWIPGPD-MQ--VARGYQSSATMSDGR-VFTI 303 (656)
T ss_dssp ECT-TSCEEEECSSSTTCEEEEEGGGTEEEECCC-CS--SCCSSCEEEECTTSC-EEEE
T ss_pred CCC-CCCEEEeCCCCCCceEEecCcCCceeECCC-CC--ccccccceEEecCCe-EEEE
Confidence 666 8899987432 259999999988876532 11 111223556667888 8887
No 321
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.49 E-value=0.21 Score=49.26 Aligned_cols=108 Identities=10% Similarity=0.048 Sum_probs=63.0
Q ss_pred ccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCC
Q 018242 143 FCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTS 222 (359)
Q Consensus 143 ~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~ 222 (359)
.+.++.++|||++|-++... .+.....|+.+|.++++............+++++ |++.++++....
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~-------------~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~ 195 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSL-------------AGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDK 195 (693)
T ss_dssp EEEEEEECTTSSEEEEEEEC-------------SSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSC
T ss_pred EEEEEEECCCCCEEEEEEec-------------CCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecC
Confidence 56678999999965554211 0122346999999988764431111113577899 999887776542
Q ss_pred ------------CEEEEEEcCCCCCcceeEeecCC---CCCCceEECCCCC-EEEEEe
Q 018242 223 ------------CRILRYWLKTSKAGTIEIVAQLP---GFPDNIKRSPRGG-FWVGIH 264 (359)
Q Consensus 223 ------------~~i~~~~~~~~~~~~~~~~~~~~---~~p~~i~~d~~G~-lwv~~~ 264 (359)
..|+++++..+......++.... ..-.++.+++||+ |+++..
T Consensus 196 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~ 253 (693)
T 3iuj_A 196 PDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAA 253 (693)
T ss_dssp CC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEE
T ss_pred cccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEc
Confidence 46999987654322233332211 1123467899997 444443
No 322
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.17 E-value=0.62 Score=41.10 Aligned_cols=193 Identities=11% Similarity=0.154 Sum_probs=100.5
Q ss_pred EEeeCCCCCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecC
Q 018242 27 QYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKT 106 (359)
Q Consensus 27 ~~~~~~~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~ 106 (359)
.+..+.-....+|.+.+++. .|+....+.|++-...+..|+..... ..........|.+++
T Consensus 29 ~~~~~~~~~~~~v~~~~~~~-~~~~G~~g~i~~s~DgG~tW~~~~~~-----------------~~~~~~~~~~i~~~~- 89 (327)
T 2xbg_A 29 AIQLPTTATILDMSFIDRHH-GWLVGVNATLMETRDGGQTWEPRTLV-----------------LDHSDYRFNSVSFQG- 89 (327)
T ss_dssp EEECSCSSCEEEEEESSSSC-EEEEETTTEEEEESSTTSSCEECCCC-----------------CSCCCCEEEEEEEET-
T ss_pred EeecCCCCcEEEEEECCCCc-EEEEcCCCeEEEeCCCCCCCeECCCC-----------------CCCCCccEEEEEecC-
Confidence 44444445667888887787 55544557777764334446543210 000111245777864
Q ss_pred CCeEEEEeCCCcEEEEeCCCC-eEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEE
Q 018242 107 NGDLYIADAYFGLLKVGPEGG-LATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMK 185 (359)
Q Consensus 107 ~g~l~v~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 185 (359)
+++|++.....|++ ..++| ..+.+... ...+ ..+..|++.++++ +|++.. .+.|++
T Consensus 90 -~~~~~~g~~g~i~~-S~DgG~tW~~~~~~-~~~~-~~~~~i~~~~~~~-~~~~~~------------------~g~v~~ 146 (327)
T 2xbg_A 90 -NEGWIVGEPPIMLH-TTDGGQSWSQIPLD-PKLP-GSPRLIKALGNGS-AEMITN------------------VGAIYR 146 (327)
T ss_dssp -TEEEEEEETTEEEE-ESSTTSSCEECCCC-TTCS-SCEEEEEEEETTE-EEEEET------------------TCCEEE
T ss_pred -CeEEEEECCCeEEE-ECCCCCCceECccc-cCCC-CCeEEEEEECCCC-EEEEeC------------------CccEEE
Confidence 67888754445655 44544 34433211 0111 2346677777777 887721 345776
Q ss_pred EeCCCCcEEEEeCCC-CCCceEEEccCCCEEEEEecCCCEEEEEEcCCCCCcceeEeec-CCCCCCceEECCCCCEEEEE
Q 018242 186 YDPATKQVTVLLGNL-SFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGGFWVGI 263 (359)
Q Consensus 186 ~d~~~~~~~~~~~~~-~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwv~~ 263 (359)
-...+...+.+.... ....+++++++++ +|+.. ..+.+++-. +...... +.... .+.....++++++|++|++.
T Consensus 147 S~DgG~tW~~~~~~~~~~~~~~~~~~~~~-~~~~g-~~G~~~~S~-d~gG~tW-~~~~~~~~~~~~~~~~~~~g~~~~~~ 222 (327)
T 2xbg_A 147 TKDSGKNWQALVQEAIGVMRNLNRSPSGE-YVAVS-SRGSFYSTW-EPGQTAW-EPHNRTTSRRLHNMGFTPDGRLWMIV 222 (327)
T ss_dssp ESSTTSSEEEEECSCCCCEEEEEECTTSC-EEEEE-TTSSEEEEE-CTTCSSC-EEEECCSSSCEEEEEECTTSCEEEEE
T ss_pred EcCCCCCCEEeecCCCcceEEEEEcCCCc-EEEEE-CCCcEEEEe-CCCCCce-eECCCCCCCccceeEECCCCCEEEEe
Confidence 554444555443322 2345778888776 44444 345666654 2111111 11111 12223457788899999877
Q ss_pred ec
Q 018242 264 HS 265 (359)
Q Consensus 264 ~~ 265 (359)
..
T Consensus 223 ~~ 224 (327)
T 2xbg_A 223 NG 224 (327)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 323
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.76 E-value=1.5 Score=42.74 Aligned_cols=75 Identities=11% Similarity=0.147 Sum_probs=47.7
Q ss_pred eEEEccCCCeeEEec-CCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC-
Q 018242 38 SLAFDALGEGPYTGV-SDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA- 115 (359)
Q Consensus 38 ~i~~~~~G~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~- 115 (359)
+.++..+|+++.++- ....+.+||+.+++|+.....+ ....-+..++.+ ++++|+...
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~-------------------~~R~~~s~~~~~-dg~iyv~GG~ 306 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQ-------------------VARGYQSSATMS-DGRVFTIGGS 306 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCS-------------------SCCSSCEEEECT-TSCEEEECCC
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCC-------------------ccccccceEEec-CCeEEEEeCc
Confidence 467778899555554 3357999999998887653111 111123455555 778887643
Q ss_pred C------CcEEEEeCCCCeEEEE
Q 018242 116 Y------FGLLKVGPEGGLATAV 132 (359)
Q Consensus 116 ~------~~i~~~~~~~~~~~~~ 132 (359)
. +.+.+||+.+++++.+
T Consensus 307 ~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 307 WSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp CCSSSCCCCEEEEETTTTEEEEE
T ss_pred ccCCcccccceEeCCCCCcceeC
Confidence 1 2488899988887764
No 324
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.56 E-value=1.4 Score=43.75 Aligned_cols=107 Identities=9% Similarity=0.126 Sum_probs=61.5
Q ss_pred ccceEEEe-CCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCC-cEEEEeCCCC-CCceEEEccCCCEEEEEe
Q 018242 143 FCNSLDID-QSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATK-QVTVLLGNLS-FPNGVALSEDGNYILLAE 219 (359)
Q Consensus 143 ~~~~l~~d-~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~-~~~~~~~~~~-~p~gia~~~d~~~l~v~~ 219 (359)
......++ |||++|.++... .+.....|+.+|.+++ +.. ..... ...+++++||++.++++.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~-------------~G~~~~~l~v~dl~~g~~~l--~~~~~~~~~~~~WspDg~~l~y~~ 239 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDM-------------SGNEVYTIEFKRISDPSQTI--ADKVSGTNGEIVWGPDHTSLFYVT 239 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEES-------------SSSSCEEEEEEETTCTTCCC--CCCEEEECSCCEECSSTTEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeC-------------CCCceEEEEEEECCCCCEeC--CccccCceeeEEEecCCCEEEEEE
Confidence 45568999 999966655321 0112235999999887 521 11111 135789999998777765
Q ss_pred cCC----CEEEEEEcCCCCCcceeEeec-CCCCCCceEECCCCC-EEEEEe
Q 018242 220 TTS----CRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGG-FWVGIH 264 (359)
Q Consensus 220 ~~~----~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~-lwv~~~ 264 (359)
... ..|+++++.++......++.. -..+-.++.+++||+ |.+...
T Consensus 240 ~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~ 290 (751)
T 2xe4_A 240 KDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQ 290 (751)
T ss_dssp ECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEE
T ss_pred ECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEec
Confidence 432 478888876543222233332 112223467889997 444443
No 325
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=95.23 E-value=0.93 Score=41.18 Aligned_cols=134 Identities=10% Similarity=0.058 Sum_probs=80.8
Q ss_pred EEeeCCCCCCceEEEccCCCeeEEecCCCEEEEEEcCCcce-EEEeecCCCCCCCCCCcccccccccccCCcceEEEEec
Q 018242 27 QYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRW-LHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNK 105 (359)
Q Consensus 27 ~~~~~~~~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~ 105 (359)
.+.++ .+..+++ ||+.++++ .++.|..||..+-.- .... ........+...+
T Consensus 84 ~~~lp---~V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~---------------------~~~~~v~~i~~~~ 136 (388)
T 1xip_A 84 EKEIP---DVIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVT---------------------SFEKPVFQLKNVN 136 (388)
T ss_dssp EEECT---TEEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEE---------------------ECSSCEEEEEECS
T ss_pred EeeCC---CeeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccc---------------------eeecceeeEEecC
Confidence 44444 3889999 88888888 778999999765321 1110 0011123343333
Q ss_pred CCCeEEEEeCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEE
Q 018242 106 TNGDLYIADAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMK 185 (359)
Q Consensus 106 ~~g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 185 (359)
.++.+++..+.|..++.+++....+. ..+..++++|+|. .++ ...|.+..
T Consensus 137 --p~~av~~~dG~L~v~dl~~~~~~~~~--------~~Vs~v~WSpkG~--~vg------------------~~dg~i~~ 186 (388)
T 1xip_A 137 --NTLVILNSVNDLSALDLRTKSTKQLA--------QNVTSFDVTNSQL--AVL------------------LKDRSFQS 186 (388)
T ss_dssp --SEEEEEETTSEEEEEETTTCCEEEEE--------ESEEEEEECSSEE--EEE------------------ETTSCEEE
T ss_pred --CCEEEEECCCCEEEEEccCCcccccc--------CCceEEEEcCCce--EEE------------------EcCCcEEE
Confidence 24666666667888898877654432 2567899999993 444 12456777
Q ss_pred EeCCCCcE---EEEe------C---CCCCCceEEEccCCCEEEE
Q 018242 186 YDPATKQV---TVLL------G---NLSFPNGVALSEDGNYILL 217 (359)
Q Consensus 186 ~d~~~~~~---~~~~------~---~~~~p~gia~~~d~~~l~v 217 (359)
|+++++.+ ..+. . +...+..|.+.++++++.+
T Consensus 187 ~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 187 FAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 78876664 2331 1 2234567888877765544
No 326
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.12 E-value=1.5 Score=38.04 Aligned_cols=138 Identities=17% Similarity=0.211 Sum_probs=75.3
Q ss_pred CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC----------CcEEEEeC
Q 018242 55 GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY----------FGLLKVGP 124 (359)
Q Consensus 55 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~----------~~i~~~~~ 124 (359)
..++++|+.+++|+.+...+ ....-+.++.. ++.||+.... +.+.++|+
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p-------------------~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~ 97 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQ-------------------VPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNP 97 (308)
T ss_dssp CCEEEEETTTTEEEECCCCS-------------------SCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEET
T ss_pred ceEEEEcCCCCeEeECCCCC-------------------cccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECC
Confidence 46899999998888753111 00112234433 6788876322 35899999
Q ss_pred CCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCCCCCCc
Q 018242 125 EGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPN 204 (359)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~ 204 (359)
.+++++.+..... + ..-..++. -+++ ||+.--.. .......++++|+.+++.+.+. ....+.
T Consensus 98 ~~~~W~~~~~~p~--~-r~~~~~~~-~~~~-iyv~GG~~------------~~~~~~~~~~yd~~~~~W~~~~-~~p~~r 159 (308)
T 1zgk_A 98 MTNQWSPCAPMSV--P-RNRIGVGV-IDGH-IYAVGGSH------------GCIHHNSVERYEPERDEWHLVA-PMLTRR 159 (308)
T ss_dssp TTTEEEECCCCSS--C-CBTCEEEE-ETTE-EEEECCEE------------TTEECCCEEEEETTTTEEEECC-CCSSCC
T ss_pred CCCeEeECCCCCc--C-ccccEEEE-ECCE-EEEEcCCC------------CCcccccEEEECCCCCeEeECC-CCCccc
Confidence 9998876542111 1 11123333 3666 88872100 0011246999999988776553 222221
Q ss_pred ---eEEEccCCCEEEEEecC-----CCEEEEEEcCCC
Q 018242 205 ---GVALSEDGNYILLAETT-----SCRILRYWLKTS 233 (359)
Q Consensus 205 ---gia~~~d~~~l~v~~~~-----~~~i~~~~~~~~ 233 (359)
..+.. ++ .+|+..-. .+.+++||+...
T Consensus 160 ~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 160 IGVGVAVL-NR-LLYAVGGFDGTNRLNSAECYYPERN 194 (308)
T ss_dssp BSCEEEEE-TT-EEEEECCBCSSCBCCCEEEEETTTT
T ss_pred cceEEEEE-CC-EEEEEeCCCCCCcCceEEEEeCCCC
Confidence 22332 44 47776532 256888987543
No 327
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.07 E-value=0.21 Score=49.76 Aligned_cols=153 Identities=7% Similarity=-0.065 Sum_probs=83.4
Q ss_pred ceEEEc-cCCCeeE-EecCC----CEEEEEEcCCc-ceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCe
Q 018242 37 ESLAFD-ALGEGPY-TGVSD----GRIIKWHQDQR-RWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGD 109 (359)
Q Consensus 37 ~~i~~~-~~G~~l~-~~~~~----~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~ 109 (359)
.++.++ |||+.+. +.... ..|+.+|..++ +.... .+.. ...++++++++..
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-------------------~~~~---~~~~~~WspDg~~ 234 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-------------------KVSG---TNGEIVWGPDHTS 234 (751)
T ss_dssp EEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-------------------CEEE---ECSCCEECSSTTE
T ss_pred eeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-------------------cccC---ceeeEEEecCCCE
Confidence 356788 8998444 33332 25899998876 42100 1111 1235778885556
Q ss_pred EEEEeCC-----CcEEEEeCCCCeE--EEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCce
Q 018242 110 LYIADAY-----FGLLKVGPEGGLA--TAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGR 182 (359)
Q Consensus 110 l~v~~~~-----~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~ 182 (359)
|+++... ..|++.+..+++. +.+... ... ....++.+++||++|+++... .....
T Consensus 235 l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~-~~~--~~~~~~~~SpDg~~l~~~~~~---------------~~~~~ 296 (751)
T 2xe4_A 235 LFYVTKDETLRENKVWRHVMGKLQSEDVCLYEE-HNP--LFSAFMYKAADTNTLCIGSQS---------------PETAE 296 (751)
T ss_dssp EEEEEECTTCCEEEEEEEETTSCGGGCEEEEEC-CCT--TCEEEEEECTTSSEEEEEEEC---------------SSCEE
T ss_pred EEEEEECCCCCCCEEEEEECCCCchhcEEEEec-CCC--ceEEEEEECCCCCEEEEEecC---------------CCCce
Confidence 6665322 2488888876542 122221 111 123467899999977776321 12346
Q ss_pred EEEEeCCCC--cE--EEEeCCCCCCceEEEcc---CCCEEEEEecC----CCEEEEEEcCC
Q 018242 183 LMKYDPATK--QV--TVLLGNLSFPNGVALSE---DGNYILLAETT----SCRILRYWLKT 232 (359)
Q Consensus 183 v~~~d~~~~--~~--~~~~~~~~~p~gia~~~---d~~~l~v~~~~----~~~i~~~~~~~ 232 (359)
|+.+|.+++ .. +.+..... +..+++ +++.+|+.... ..+|++++++.
T Consensus 297 l~~~d~~~~~~~~~~~~l~~~~~---~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 297 VHLLDLRKGNAHNTLEIVRPREK---GVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EEEEESSSCTTCCCEEESSCCCT---TCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred EEEEECCCCCCCceeEEeecCCC---CceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 888998764 33 43332222 222333 36666665433 35899998754
No 328
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.78 E-value=1.8 Score=37.34 Aligned_cols=137 Identities=13% Similarity=0.102 Sum_probs=73.7
Q ss_pred CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC----------CCcEEEEeC
Q 018242 55 GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA----------YFGLLKVGP 124 (359)
Q Consensus 55 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~----------~~~i~~~~~ 124 (359)
..+++||+.+++|+.....+ ....-+.++.. ++.||+... .+.+.+||+
T Consensus 118 ~~~~~~d~~~~~W~~~~~~p-------------------~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~ 176 (306)
T 3ii7_A 118 YLFECYDTRTESWHTKPSML-------------------TQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDP 176 (306)
T ss_dssp CCEEEEETTTTEEEEECCCS-------------------SCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEET
T ss_pred eeEEEEeCCCCceEeCCCCc-------------------CCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCC
Confidence 46899999999888764211 11112233333 678888642 234889999
Q ss_pred CCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCCCCCCc
Q 018242 125 EGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPN 204 (359)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~ 204 (359)
++++++.+..... + ..-+.+++. +++ ||+.--.. .......+++||+.+++.+.+. ....+.
T Consensus 177 ~~~~W~~~~~~p~--~-r~~~~~~~~-~~~-i~v~GG~~------------~~~~~~~~~~yd~~~~~W~~~~-~~p~~r 238 (306)
T 3ii7_A 177 ATETWTELCPMIE--A-RKNHGLVFV-KDK-IFAVGGQN------------GLGGLDNVEYYDIKLNEWKMVS-PMPWKG 238 (306)
T ss_dssp TTTEEEEECCCSS--C-CBSCEEEEE-TTE-EEEECCEE------------TTEEBCCEEEEETTTTEEEECC-CCSCCB
T ss_pred CCCeEEECCCccc--h-hhcceEEEE-CCE-EEEEeCCC------------CCCCCceEEEeeCCCCcEEECC-CCCCCc
Confidence 9998877643111 1 122233333 566 88872100 0011246999999988776653 222221
Q ss_pred ---eEEEccCCCEEEEEecC-----CCEEEEEEcCC
Q 018242 205 ---GVALSEDGNYILLAETT-----SCRILRYWLKT 232 (359)
Q Consensus 205 ---gia~~~d~~~l~v~~~~-----~~~i~~~~~~~ 232 (359)
..+.. ++ .+|+..-. .+.+++||+..
T Consensus 239 ~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 239 VTVKCAAV-GS-IVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp SCCEEEEE-TT-EEEEEECBCSSSBCCEEEEEETTT
T ss_pred cceeEEEE-CC-EEEEEeCcCCCeeeeeEEEEcCCC
Confidence 22222 34 36666532 24566666543
No 329
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=94.73 E-value=0.026 Score=51.19 Aligned_cols=52 Identities=13% Similarity=0.079 Sum_probs=28.3
Q ss_pred CceEEEEeCCCCcEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC
Q 018242 180 TGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS 233 (359)
Q Consensus 180 ~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~ 233 (359)
.+.|+.+|.++|+....... .......+..+++ +|++.+.++.|+.||....
T Consensus 18 dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG 69 (369)
T 2hz6_A 18 DGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNN 69 (369)
T ss_dssp TSEEEEEETTTCCEEEEEEC-CCSCCCC-----C-CEEECTTTCCEEEC-----
T ss_pred CCEEEEEECCCCCEEEEecC-CCceecceEcCCC-EEEEeCCCCEEEEEECCCC
Confidence 46799999988887754332 2222222334554 6777677889999987543
No 330
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.60 E-value=0.21 Score=47.23 Aligned_cols=87 Identities=20% Similarity=0.182 Sum_probs=60.4
Q ss_pred eEEEEeCCC----C-cEEEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCC------CCCcce-e-Eeec--CCC
Q 018242 182 RLMKYDPAT----K-QVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKT------SKAGTI-E-IVAQ--LPG 246 (359)
Q Consensus 182 ~v~~~d~~~----~-~~~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~------~~~~~~-~-~~~~--~~~ 246 (359)
+|-++|... + .+..+......|.|+.++|||+++++++-.+.++.+++... ++..+. . ...+ ++-
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 567787754 1 23334455578999999999999999999999999999752 222111 1 1222 334
Q ss_pred CCCceEECCCCCEEEEEecCCC
Q 018242 247 FPDNIKRSPRGGFWVGIHSRRK 268 (359)
Q Consensus 247 ~p~~i~~d~~G~lwv~~~~~~~ 268 (359)
.|--.++|++|+.|++.+-...
T Consensus 379 GPlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp CEEEEEECSSSEEEEEETTTTE
T ss_pred cccEEEECCCCceEeeeeecce
Confidence 5777899999999988876554
No 331
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.39 E-value=2.1 Score=37.20 Aligned_cols=105 Identities=8% Similarity=0.001 Sum_probs=59.7
Q ss_pred CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC-------CcEEEEeCCCC
Q 018242 55 GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY-------FGLLKVGPEGG 127 (359)
Q Consensus 55 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~-------~~i~~~~~~~~ 127 (359)
..++++|+.+++|+.....+ ....-+.++.. +++||+.... +.+.++|+.+.
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p-------------------~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLP-------------------YVVYGHTVLSH--MDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp CCEEEEETTTTEEEECCCCS-------------------SCCBSCEEEEE--TTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred ceEEEECCCCCcEeECCCCC-------------------CcccceeEEEE--CCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 46899999998887653111 11112334443 6788886432 24899999999
Q ss_pred eEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEe
Q 018242 128 LATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLL 197 (359)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~ 197 (359)
+.+.+..... + ..-+.+++ -+++ ||+.--.. .......+++||+++++...+.
T Consensus 176 ~W~~~~~~p~--~-r~~~~~~~-~~~~-iyv~GG~~------------~~~~~~~~~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 176 EWKELAPMQT--A-RSLFGATV-HDGR-IIVAAGVT------------DTGLTSSAEVYSITDNKWAPFE 228 (315)
T ss_dssp EEEECCCCSS--C-CBSCEEEE-ETTE-EEEEEEEC------------SSSEEEEEEEEETTTTEEEEEC
T ss_pred eEEECCCCCC--c-hhceEEEE-ECCE-EEEEeccC------------CCCccceEEEEECCCCeEEECC
Confidence 8876542111 1 11223333 3566 88862100 0011236899999988777653
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.28 E-value=2.7 Score=37.17 Aligned_cols=92 Identities=12% Similarity=0.084 Sum_probs=49.9
Q ss_pred CCCeeEEe-cCCCEEEEEEcCC--cceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC----
Q 018242 44 LGEGPYTG-VSDGRIIKWHQDQ--RRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY---- 116 (359)
Q Consensus 44 ~G~~l~~~-~~~~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~---- 116 (359)
+++++.++ .....++++|+.+ .+|+..... ......-+.++.. ++.||+....
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~------------------p~~~R~~~~~~~~--~~~lyv~GG~~~~~ 78 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAF------------------PGGPRDQATSAFI--DGNLYVFGGIGKNS 78 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCC------------------TTCCCBSCEEEEE--TTEEEEECCEEECT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCC------------------CCCcCccceEEEE--CCEEEEEcCCCCCC
Confidence 56633343 3345799999974 667765311 1011112334443 6788885321
Q ss_pred -------CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEE
Q 018242 117 -------FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFT 159 (359)
Q Consensus 117 -------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~ 159 (359)
+.+.+||+.+.+++.+.... ..+ ..-+.++. .+++ ||+.
T Consensus 79 ~~~~~~~~~v~~yd~~~~~W~~~~~~~-p~~-r~~~~~~~-~~~~-iyv~ 124 (357)
T 2uvk_A 79 EGLTQVFNDVHKYNPKTNSWVKLMSHA-PMG-MAGHVTFV-HNGK-AYVT 124 (357)
T ss_dssp TSCEEECCCEEEEETTTTEEEECSCCC-SSC-CSSEEEEE-ETTE-EEEE
T ss_pred CccceeeccEEEEeCCCCcEEECCCCC-Ccc-cccceEEE-ECCE-EEEE
Confidence 24899999999887654322 011 12223333 5666 8886
No 333
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.15 E-value=2.6 Score=36.58 Aligned_cols=104 Identities=14% Similarity=0.194 Sum_probs=59.4
Q ss_pred CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC-------CCcEEEEeCCCC
Q 018242 55 GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA-------YFGLLKVGPEGG 127 (359)
Q Consensus 55 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~-------~~~i~~~~~~~~ 127 (359)
..+++||+.+++|+.....+ ....-+.++. . ++.||+... .+.+.+||+.++
T Consensus 127 ~~~~~yd~~~~~W~~~~~~p-------------------~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 127 DSVLCYDPVAAKWSEVKNLP-------------------IKVYGHNVIS-H-NGMIYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp EEEEEEETTTTEEEEECCCS-------------------SCEESCEEEE-E-TTEEEEECCEESSSCBCCCEEEEETTTT
T ss_pred ceEEEEeCCCCCEeECCCCC-------------------CcccccEEEE-E-CCEEEEEcCCCCCCCccceEEEEcCCCC
Confidence 36889999999888764111 0011223444 3 788888632 124899999999
Q ss_pred eEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEE
Q 018242 128 LATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVL 196 (359)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 196 (359)
+++.+..... + ..-+.+++ -+++ ||+.--. . .......+++||+++++.+.+
T Consensus 186 ~W~~~~~~p~--~-r~~~~~~~-~~~~-iyv~GG~---~---------~~~~~~~~~~yd~~~~~W~~~ 237 (318)
T 2woz_A 186 DWKDLAPMKT--P-RSMFGVAI-HKGK-IVIAGGV---T---------EDGLSASVEAFDLKTNKWEVM 237 (318)
T ss_dssp EEEEECCCSS--C-CBSCEEEE-ETTE-EEEEEEE---E---------TTEEEEEEEEEETTTCCEEEC
T ss_pred EEEECCCCCC--C-cccceEEE-ECCE-EEEEcCc---C---------CCCccceEEEEECCCCeEEEC
Confidence 8877643111 1 11223333 3566 8887210 0 001123688999998877665
No 334
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.84 E-value=2.9 Score=36.07 Aligned_cols=138 Identities=15% Similarity=0.182 Sum_probs=76.5
Q ss_pred CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC------CCcEEEEeCCCCe
Q 018242 55 GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA------YFGLLKVGPEGGL 128 (359)
Q Consensus 55 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~------~~~i~~~~~~~~~ 128 (359)
..++++|+.+++|+.....+ ....-+.++.. ++.||+... .+.+.++|+.+++
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p-------------------~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMS-------------------VPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDE 148 (308)
T ss_dssp CCEEEEETTTTEEEECCCCS-------------------SCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTE
T ss_pred ceEEEECCCCCeEeECCCCC-------------------cCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCe
Confidence 46889999998887753111 11112334433 678888632 1358999999998
Q ss_pred EEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCCCCCCc---e
Q 018242 129 ATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPN---G 205 (359)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~---g 205 (359)
.+.+..... + ..-..+++. +++ ||+.--.. .......+++||+.+++...+. ....|. .
T Consensus 149 W~~~~~~p~--~-r~~~~~~~~-~~~-iyv~GG~~------------~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~ 210 (308)
T 1zgk_A 149 WHLVAPMLT--R-RIGVGVAVL-NRL-LYAVGGFD------------GTNRLNSAECYYPERNEWRMIT-AMNTIRSGAG 210 (308)
T ss_dssp EEECCCCSS--C-CBSCEEEEE-TTE-EEEECCBC------------SSCBCCCEEEEETTTTEEEECC-CCSSCCBSCE
T ss_pred EeECCCCCc--c-ccceEEEEE-CCE-EEEEeCCC------------CCCcCceEEEEeCCCCeEeeCC-CCCCccccce
Confidence 876543111 1 112233333 566 88872110 0011346999999988776543 222221 2
Q ss_pred EEEccCCCEEEEEecC-----CCEEEEEEcCCC
Q 018242 206 VALSEDGNYILLAETT-----SCRILRYWLKTS 233 (359)
Q Consensus 206 ia~~~d~~~l~v~~~~-----~~~i~~~~~~~~ 233 (359)
.+.. ++ .+|+..-. .+.+++||+...
T Consensus 211 ~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 211 VCVL-HN-CIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp EEEE-TT-EEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EEEE-CC-EEEEEeCCCCCCccceEEEEeCCCC
Confidence 2222 44 47777633 256899987543
No 335
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.39 E-value=3.6 Score=35.63 Aligned_cols=142 Identities=12% Similarity=0.067 Sum_probs=74.4
Q ss_pred CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC------C------CcEEEE
Q 018242 55 GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA------Y------FGLLKV 122 (359)
Q Consensus 55 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~------~------~~i~~~ 122 (359)
..+..||+.+++|+... .+ .+....-+.++. . ++.||+... . +.+.++
T Consensus 13 ~~~~~yd~~~~~W~~~~-~~-----------------~p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~ 72 (315)
T 4asc_A 13 EGAVAYDPAANECYCAS-LS-----------------SQVPKNHVSLVT-K-ENQVFVAGGLFYNEDNKEDPMSAYFLQF 72 (315)
T ss_dssp TEEEEEETTTTEEEEEE-CC-----------------CCSCSSEEEEEC-T-TCCEEEEEEEEECSSCSSSCEEEEEEEE
T ss_pred CceEEECCCCCeEecCC-CC-----------------CCCCccceEEEE-E-CCEEEEEcCcccCCCCCccccccceEEe
Confidence 57999999999887521 10 001111223333 2 677877532 1 127889
Q ss_pred eCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCCCCC
Q 018242 123 GPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSF 202 (359)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~ 202 (359)
|+.+++.+.+... +. + ..-+.++.. +++ ||+.--..... .......++++|+.+++.+.+. ....
T Consensus 73 d~~~~~W~~~~~~-p~-~-r~~~~~~~~-~~~-lyv~GG~~~~~---------~~~~~~~~~~~d~~~~~W~~~~-~~p~ 137 (315)
T 4asc_A 73 DHLDSEWLGMPPL-PS-P-RCLFGLGEA-LNS-IYVVGGREIKD---------GERCLDSVMCYDRLSFKWGESD-PLPY 137 (315)
T ss_dssp ETTTTEEEECCCB-SS-C-EESCEEEEE-TTE-EEEECCEESST---------TCCBCCCEEEEETTTTEEEECC-CCSS
T ss_pred cCCCCeEEECCCC-Cc-c-hhceeEEEE-CCE-EEEEeCCcCCC---------CCcccceEEEECCCCCcEeECC-CCCC
Confidence 9999988765321 11 1 112233333 555 88872100000 0122346999999988766543 2222
Q ss_pred Cc---eEEEccCCCEEEEEecC------CCEEEEEEcCCC
Q 018242 203 PN---GVALSEDGNYILLAETT------SCRILRYWLKTS 233 (359)
Q Consensus 203 p~---gia~~~d~~~l~v~~~~------~~~i~~~~~~~~ 233 (359)
|. ..+. .++ .+|+..-. .+.+++||+...
T Consensus 138 ~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 138 VVYGHTVLS-HMD-LVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp CCBSCEEEE-ETT-EEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred cccceeEEE-ECC-EEEEEeCCCCCCcccceEEEEeCCCC
Confidence 21 2222 344 47777643 246888986543
No 336
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=93.13 E-value=3.8 Score=35.15 Aligned_cols=140 Identities=15% Similarity=0.125 Sum_probs=76.3
Q ss_pred CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC-C-----CcEEEEeCCCCe
Q 018242 55 GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA-Y-----FGLLKVGPEGGL 128 (359)
Q Consensus 55 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~-~-----~~i~~~~~~~~~ 128 (359)
..++++|+.+++|+.....+ ....-++++.. ++.+|+... . +.+.++|+.+++
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p-------------------~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 135 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMR-------------------DRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNE 135 (302)
T ss_dssp CCEEEEETTTTEEEEECCCS-------------------SCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTE
T ss_pred cceEEECCCCCceeeCCCCC-------------------ccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCe
Confidence 46899999999888764211 11112344443 678887532 1 248899999998
Q ss_pred EEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCCCCCCc---e
Q 018242 129 ATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPN---G 205 (359)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~---g 205 (359)
.+.+..... + ..-+.+++ -+++ ||+.--... . .......+++||+.+++...+. ....+. .
T Consensus 136 W~~~~~~p~--~-r~~~~~~~-~~~~-iyv~GG~~~---~-------~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~ 199 (302)
T 2xn4_A 136 WFHVAPMNT--R-RSSVGVGV-VGGL-LYAVGGYDV---A-------SRQCLSTVECYNATTNEWTYIA-EMSTRRSGAG 199 (302)
T ss_dssp EEEECCCSS--C-CBSCEEEE-ETTE-EEEECCEET---T-------TTEECCCEEEEETTTTEEEEEC-CCSSCCBSCE
T ss_pred EeecCCCCC--c-ccCceEEE-ECCE-EEEEeCCCC---C-------CCccccEEEEEeCCCCcEEECC-CCcccccccc
Confidence 877643211 1 11223333 3566 888721100 0 0001346999999988776653 222221 2
Q ss_pred EEEccCCCEEEEEecC-----CCEEEEEEcCCC
Q 018242 206 VALSEDGNYILLAETT-----SCRILRYWLKTS 233 (359)
Q Consensus 206 ia~~~d~~~l~v~~~~-----~~~i~~~~~~~~ 233 (359)
.+. -++ .+|+..-. .+.+++||+..+
T Consensus 200 ~~~-~~~-~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 200 VGV-LNN-LLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp EEE-ETT-EEEEECCBSSSSBCCCEEEEETTTT
T ss_pred EEE-ECC-EEEEECCCCCCcccceEEEEeCCCC
Confidence 222 244 47777532 246889987543
No 337
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.04 E-value=3.9 Score=35.03 Aligned_cols=105 Identities=14% Similarity=0.208 Sum_probs=61.1
Q ss_pred CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC------CCcEEEEeCCCCe
Q 018242 55 GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA------YFGLLKVGPEGGL 128 (359)
Q Consensus 55 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~------~~~i~~~~~~~~~ 128 (359)
..++++|+.+++|+.+...+ .....+.++.. +++||+... .+.+.+||+.+++
T Consensus 128 ~~~~~~d~~~~~W~~~~~~p-------------------~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 186 (301)
T 2vpj_A 128 TSMERYDPNIDQWSMLGDMQ-------------------TAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGH 186 (301)
T ss_dssp CEEEEEETTTTEEEEEEECS-------------------SCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred ceEEEEcCCCCeEEECCCCC-------------------CCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCc
Confidence 47999999999888775221 11112334333 678888632 2358999999999
Q ss_pred EEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEe
Q 018242 129 ATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLL 197 (359)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~ 197 (359)
++.+..... +. .-+.++. -+++ ||+.--.. .......+++||+++++.+.+.
T Consensus 187 W~~~~~~p~--~r-~~~~~~~-~~~~-i~v~GG~~------------~~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 187 WTNVTPMAT--KR-SGAGVAL-LNDH-IYVVGGFD------------GTAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp EEEECCCSS--CC-BSCEEEE-ETTE-EEEECCBC------------SSSBCCCEEEEETTTTEEEEEC
T ss_pred EEeCCCCCc--cc-ccceEEE-ECCE-EEEEeCCC------------CCcccceEEEEeCCCCcEEECC
Confidence 877642111 11 1223333 3556 88872110 0011346999999988776653
No 338
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=92.56 E-value=2.3 Score=38.63 Aligned_cols=155 Identities=11% Similarity=0.068 Sum_probs=84.9
Q ss_pred CCCceEEEccCCCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEE
Q 018242 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIA 113 (359)
Q Consensus 34 ~~p~~i~~~~~G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 113 (359)
.....++++++..+++++..+ ++..|+.+.-. ..+...... .++. ....... +..++| ++..|+++
T Consensus 38 ~~~nlLais~~~gll~a~~~~-~l~v~~~~~l~-~~~~~~~~~-------~~~~--~~~~lp~-V~~l~f--d~~~L~v~ 103 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGS-KAVVGELQLLR-DHITSDSTP-------LTFK--WEKEIPD-VIFVCF--HGDQVLVS 103 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETT-EEEEEEHHHHH-HHHHSSSCC-------CCCS--EEEECTT-EEEEEE--ETTEEEEE
T ss_pred ccccEEEEcCCCCEEEEeCCC-EEEEEEhhHhh-hhhcccccc-------ccce--EEeeCCC-eeEEEE--CCCEEEEE
Confidence 346689999999867777775 66668765321 000000000 0000 0112223 788899 38889998
Q ss_pred eCCCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcE
Q 018242 114 DAYFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQV 193 (359)
Q Consensus 114 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 193 (359)
..++|..|+..+-.......... . .++++..-+. + +.+. ...|.|+.+|.+++..
T Consensus 104 -~~~~l~v~dv~sl~~~~~~~~~~-~---~v~~i~~~~p-~-~av~------------------~~dG~L~v~dl~~~~~ 158 (388)
T 1xip_A 104 -TRNALYSLDLEELSEFRTVTSFE-K---PVFQLKNVNN-T-LVIL------------------NSVNDLSALDLRTKST 158 (388)
T ss_dssp -ESSEEEEEESSSTTCEEEEEECS-S---CEEEEEECSS-E-EEEE------------------ETTSEEEEEETTTCCE
T ss_pred -cCCcEEEEEchhhhccCccceee-c---ceeeEEecCC-C-EEEE------------------ECCCCEEEEEccCCcc
Confidence 45678999876432111111111 1 1234333322 2 3333 2246788898876665
Q ss_pred EEEeCCCCCCceEEEccCCCEEEEEecCCCEEEEEEcCCC
Q 018242 194 TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS 233 (359)
Q Consensus 194 ~~~~~~~~~p~gia~~~d~~~l~v~~~~~~~i~~~~~~~~ 233 (359)
.... .....++++|+| +.+ ...++.+..|+.+..
T Consensus 159 ~~~~---~~Vs~v~WSpkG--~~v-g~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 159 KQLA---QNVTSFDVTNSQ--LAV-LLKDRSFQSFAWRNG 192 (388)
T ss_dssp EEEE---ESEEEEEECSSE--EEE-EETTSCEEEEEEETT
T ss_pred cccc---CCceEEEEcCCc--eEE-EEcCCcEEEEcCCCc
Confidence 4432 356789999998 444 446678888876543
No 339
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.40 E-value=4.8 Score=34.54 Aligned_cols=139 Identities=13% Similarity=0.039 Sum_probs=76.9
Q ss_pred CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC-----CCcEEEEeCCCCeE
Q 018242 55 GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA-----YFGLLKVGPEGGLA 129 (359)
Q Consensus 55 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~-----~~~i~~~~~~~~~~ 129 (359)
..+++||+.+++|+.+...+ ....-+.++.. ++.||+... .+.+.++|+.+++.
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p-------------------~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W 82 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPF-------------------EKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSW 82 (306)
T ss_dssp TSEEEEETTTTEEEECCCCS-------------------CCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEE
T ss_pred ceEEEecCCCCCEecCCCCC-------------------cccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeE
Confidence 57999999999888653211 11112334433 678888632 13589999999988
Q ss_pred EEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCCCCCCc---eE
Q 018242 130 TAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPN---GV 206 (359)
Q Consensus 130 ~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~---gi 206 (359)
+.+..... + ..-+.++. -+++ ||+.--... .......++++|+.+++.+.+. ....|. ..
T Consensus 83 ~~~~~~p~--~-r~~~~~~~-~~~~-iyv~GG~~~-----------~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~ 145 (306)
T 3ii7_A 83 YSKLGPPT--P-RDSLAACA-AEGK-IYTSGGSEV-----------GNSALYLFECYDTRTESWHTKP-SMLTQRCSHGM 145 (306)
T ss_dssp EEEECCSS--C-CBSCEEEE-ETTE-EEEECCBBT-----------TBSCCCCEEEEETTTTEEEEEC-CCSSCCBSCEE
T ss_pred EECCCCCc--c-ccceeEEE-ECCE-EEEECCCCC-----------CCcEeeeEEEEeCCCCceEeCC-CCcCCcceeEE
Confidence 76643211 1 11122332 2566 888721100 0112346999999988776653 222221 22
Q ss_pred EEccCCCEEEEEecC---------CCEEEEEEcCCC
Q 018242 207 ALSEDGNYILLAETT---------SCRILRYWLKTS 233 (359)
Q Consensus 207 a~~~d~~~l~v~~~~---------~~~i~~~~~~~~ 233 (359)
+. .++ .+|+..-. .+.+++||+...
T Consensus 146 ~~-~~~-~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 146 VE-ANG-LIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp EE-ETT-EEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred EE-ECC-EEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 22 244 47776532 356888887543
No 340
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.17 E-value=5.2 Score=39.31 Aligned_cols=125 Identities=9% Similarity=0.058 Sum_probs=69.2
Q ss_pred ceEEEcc-CCCeeEEecCC------CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCe
Q 018242 37 ESLAFDA-LGEGPYTGVSD------GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGD 109 (359)
Q Consensus 37 ~~i~~~~-~G~~l~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~ 109 (359)
++++..+ +|+++.++-.+ ..+++||+.+++|+..... +....-+..+... ++.
T Consensus 443 hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~-------------------p~~R~~h~~~~~~-~~~ 502 (695)
T 2zwa_A 443 HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSL-------------------SHTRFRHSACSLP-DGN 502 (695)
T ss_dssp CEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCC-------------------SBCCBSCEEEECT-TSC
T ss_pred eEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCC-------------------CCCcccceEEEEc-CCE
Confidence 3455544 67744444321 4588999999888875311 1111223444434 788
Q ss_pred EEEEeCCC---cEEEEeCCCCeEEEEeecCCC-ccccccceEEEeCC-CCEEEEEeCCCccccccceeeeeecCCCceEE
Q 018242 110 LYIADAYF---GLLKVGPEGGLATAVATQSEG-IPFRFCNSLDIDQS-TGIIYFTDSSSQFQRRNHISVILSGDKTGRLM 184 (359)
Q Consensus 110 l~v~~~~~---~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~d~~-g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 184 (359)
||+..... .+.+||+.+++++.+...... .+......++++.+ ++ ||+.--... . .......++
T Consensus 503 iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~-iyv~GG~~~-~---------~~~~~~~v~ 571 (695)
T 2zwa_A 503 VLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQ-GIILGGGFM-D---------QTTVSDKAI 571 (695)
T ss_dssp EEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTE-EEEECCBCT-T---------SSCBCCEEE
T ss_pred EEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCE-EEEECCcCC-C---------CCeeeCcEE
Confidence 88874321 589999999998765431110 01112233555766 66 988721100 0 001235699
Q ss_pred EEeCCCCc
Q 018242 185 KYDPATKQ 192 (359)
Q Consensus 185 ~~d~~~~~ 192 (359)
+||+.++.
T Consensus 572 ~yd~~~~~ 579 (695)
T 2zwa_A 572 IFKYDAEN 579 (695)
T ss_dssp EEEECTTC
T ss_pred EEEccCCc
Confidence 99998876
No 341
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.06 E-value=5.2 Score=34.18 Aligned_cols=138 Identities=14% Similarity=0.177 Sum_probs=75.5
Q ss_pred CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC------CcEEEEeCCCCe
Q 018242 55 GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY------FGLLKVGPEGGL 128 (359)
Q Consensus 55 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~------~~i~~~~~~~~~ 128 (359)
..++++|+.+++|+.+...+ ....-+.++.. ++.||+.... +.+.++|+.+++
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p-------------------~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSIT-------------------RKRRYVASVSL--HDRIYVIGGYDGRSRLSSVECLDYTADE 89 (301)
T ss_dssp CCEEEEETTTTEEEECCCCS-------------------SCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTCCT
T ss_pred eEEEEEcCCCCeEEeCCCCC-------------------hhhccccEEEE--CCEEEEEcCCCCCccCceEEEEECCCCC
Confidence 46899999998887653111 01112334333 6788886321 358999999888
Q ss_pred ---EEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCCCCCC--
Q 018242 129 ---ATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFP-- 203 (359)
Q Consensus 129 ---~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p-- 203 (359)
.+.+..... + ..-+.++. -+++ ||+.--.. .......++++|+.+++.+.+.. ...+
T Consensus 90 ~~~W~~~~~~p~--~-r~~~~~~~-~~~~-lyv~GG~~------------~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~ 151 (301)
T 2vpj_A 90 DGVWYSVAPMNV--R-RGLAGATT-LGDM-IYVSGGFD------------GSRRHTSMERYDPNIDQWSMLGD-MQTARE 151 (301)
T ss_dssp TCCCEEECCCSS--C-CBSCEEEE-ETTE-EEEECCBC------------SSCBCCEEEEEETTTTEEEEEEE-CSSCCB
T ss_pred CCeeEECCCCCC--C-ccceeEEE-ECCE-EEEEcccC------------CCcccceEEEEcCCCCeEEECCC-CCCCcc
Confidence 776533111 1 11223333 2566 88872110 01123469999999887766532 1222
Q ss_pred -ceEEEccCCCEEEEEecC-----CCEEEEEEcCCC
Q 018242 204 -NGVALSEDGNYILLAETT-----SCRILRYWLKTS 233 (359)
Q Consensus 204 -~gia~~~d~~~l~v~~~~-----~~~i~~~~~~~~ 233 (359)
...+. .++ .+|+..-. .+.+++||+...
T Consensus 152 ~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 152 GAGLVV-ASG-VIYCLGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp SCEEEE-ETT-EEEEECCBCSSCBCCCEEEEETTTT
T ss_pred cceEEE-ECC-EEEEECCCCCCcccceEEEEeCCCC
Confidence 12222 244 47776432 356888987543
No 342
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.86 E-value=1.5 Score=41.54 Aligned_cols=107 Identities=7% Similarity=-0.026 Sum_probs=65.7
Q ss_pred cccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCC------Cc-------EEEEeCCCCCCceEEE
Q 018242 142 RFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPAT------KQ-------VTVLLGNLSFPNGVAL 208 (359)
Q Consensus 142 ~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~------~~-------~~~~~~~~~~p~gia~ 208 (359)
..|+++.++|||++++++.- ....+.+++.+. ++ +.....-..+|-..+|
T Consensus 323 ksPHGv~vsPDGkyi~v~GK-----------------LsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~F 385 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGK-----------------LSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTF 385 (638)
T ss_dssp SSCCCEEECTTSCEEEEECT-----------------TSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEE
T ss_pred CCCcceeeCCCCCEEEEcCC-----------------CCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEE
Confidence 57999999999998888732 223455555431 01 1111223567889999
Q ss_pred ccCCCEEEEEecCCCEEEEEEcCC-------CCCcceeEeecCCCCC------CceEECCCCCEEEEEecC
Q 018242 209 SEDGNYILLAETTSCRILRYWLKT-------SKAGTIEIVAQLPGFP------DNIKRSPRGGFWVGIHSR 266 (359)
Q Consensus 209 ~~d~~~l~v~~~~~~~i~~~~~~~-------~~~~~~~~~~~~~~~p------~~i~~d~~G~lwv~~~~~ 266 (359)
+++| ..|.+..-+.+|.+|+++. .+......-.+..-.| .+-..+++|+..++.+.-
T Consensus 386 d~~G-~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~ 455 (638)
T 3sbq_A 386 DGRG-NAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKF 455 (638)
T ss_dssp CSSS-EEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESC
T ss_pred CCCC-ceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEeccc
Confidence 9999 5999999999999999852 2211111111122222 233457889888877653
No 343
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=91.39 E-value=12 Score=37.09 Aligned_cols=166 Identities=11% Similarity=0.058 Sum_probs=84.7
Q ss_pred CCCceEEEccCC-CeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecC-CCeEE
Q 018242 34 IGPESLAFDALG-EGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKT-NGDLY 111 (359)
Q Consensus 34 ~~p~~i~~~~~G-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~-~g~l~ 111 (359)
-.-.+|+++|.+ .++|+++..++|++.+-.+..|+.+...... .. . +.+ . ........|++++. .+.+|
T Consensus 21 g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~-~~-~-~~~----~--~~~~~~~~ia~dp~~~~~~~ 91 (763)
T 3a0f_A 21 GFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIIN-NA-L-AGN----G--ANLLGTESIALDPHNPDRLY 91 (763)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBT-TC-S-SSC----C--CCCCSEEEEECCTTCTTCEE
T ss_pred CceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccc-cc-c-CCC----c--ccccceeEEEECCCCCCEEE
Confidence 466789999865 5689998778899988776667764311000 00 0 000 0 01122457888874 47788
Q ss_pred EEeC-------CCcEEEEeCCCCeEEEEeecCCC--c-ccc-ccceEEEeCC--CCEEEEEeCCCccccccceeeeeecC
Q 018242 112 IADA-------YFGLLKVGPEGGLATAVATQSEG--I-PFR-FCNSLDIDQS--TGIIYFTDSSSQFQRRNHISVILSGD 178 (359)
Q Consensus 112 v~~~-------~~~i~~~~~~~~~~~~~~~~~~~--~-~~~-~~~~l~~d~~--g~~l~v~d~~~~~~~~~~~~~~~~~~ 178 (359)
++.. ..+|++=+-.+...+.+...... . +.. ....|+++|. +. +|++.
T Consensus 92 ~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~-v~a~~------------------ 152 (763)
T 3a0f_A 92 LAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDE-LWFGS------------------ 152 (763)
T ss_dssp EEECSCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTC-EEEEC------------------
T ss_pred EEecccccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCE-EEEEe------------------
Confidence 8753 23455543333445544321110 0 000 1146888864 45 88872
Q ss_pred CCceEEEEeCCCCcEEEEeCC---C---CCCceEEEccC-CCEEEEEecCCCEEEE
Q 018242 179 KTGRLMKYDPATKQVTVLLGN---L---SFPNGVALSED-GNYILLAETTSCRILR 227 (359)
Q Consensus 179 ~~g~v~~~d~~~~~~~~~~~~---~---~~p~gia~~~d-~~~l~v~~~~~~~i~~ 227 (359)
..+.|++-+-.+...+.+..- . .....|+++|. .+.+|++....+.|++
T Consensus 153 ~~~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~~ 208 (763)
T 3a0f_A 153 RTQGLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAVGGLWV 208 (763)
T ss_dssp SSSCEEEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESSTTCEEE
T ss_pred CCCcEEEECCCCcCccccccCcccCCCccceEEEEECCCCCCEEEEEEeCCCeEEE
Confidence 123566554333344433210 0 11235677764 3457887655433544
No 344
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=91.04 E-value=9.4 Score=38.10 Aligned_cols=162 Identities=12% Similarity=0.062 Sum_probs=85.1
Q ss_pred CCCceEEEccC-CCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCC-CeEE
Q 018242 34 IGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTN-GDLY 111 (359)
Q Consensus 34 ~~p~~i~~~~~-G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~-g~l~ 111 (359)
....+|+++|. ..++|++...++|++.+-.+..|+.+.... .++ .. .......|++++.+ +.+|
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~-------~~~-----~~--~~~~i~~ia~dp~~~~~i~ 80 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFI-------EAQ-----DM--NIMGTESIALDPNNPDRLY 80 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTC-------CGG-----GG--GGCSEEEEEEETTEEEEEE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCC-------Ccc-----cc--cCCceeEEEECCCCCCEEE
Confidence 35668889875 344899888888999987776676542100 000 00 11235678888733 6788
Q ss_pred EEeCC------CcEEEEeCCCCeEEEEeecCCC---ccc-cccceEEEeCC-CCEEEEEeCCCccccccceeeeeecCCC
Q 018242 112 IADAY------FGLLKVGPEGGLATAVATQSEG---IPF-RFCNSLDIDQS-TGIIYFTDSSSQFQRRNHISVILSGDKT 180 (359)
Q Consensus 112 v~~~~------~~i~~~~~~~~~~~~~~~~~~~---~~~-~~~~~l~~d~~-g~~l~v~d~~~~~~~~~~~~~~~~~~~~ 180 (359)
++... .+|++-+-.+...+.+...... .+. ..+..++++|. .+++|++. ..
T Consensus 81 ~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~------------------~~ 142 (789)
T 1sqj_A 81 LAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT------------------RT 142 (789)
T ss_dssp EEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC------------------SS
T ss_pred EEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe------------------cc
Confidence 87532 3455544344445554321110 011 12356888864 33488872 12
Q ss_pred ceEEEEeCCCCcEEEEeCC------CCCCceEEEcc-CCCEEEEEecCCCEEEE
Q 018242 181 GRLMKYDPATKQVTVLLGN------LSFPNGVALSE-DGNYILLAETTSCRILR 227 (359)
Q Consensus 181 g~v~~~d~~~~~~~~~~~~------~~~p~gia~~~-d~~~l~v~~~~~~~i~~ 227 (359)
+.|++-+-.+...+.+... ......++++| +++.+|++......|++
T Consensus 143 ~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~ 196 (789)
T 1sqj_A 143 EGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYV 196 (789)
T ss_dssp SCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESSTTCEEE
T ss_pred CCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCCCeEEE
Confidence 3466554433344443211 01123566666 34467777654345654
No 345
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.84 E-value=13 Score=36.43 Aligned_cols=160 Identities=8% Similarity=-0.009 Sum_probs=88.4
Q ss_pred cCCCeeEEecC----CCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC--
Q 018242 43 ALGEGPYTGVS----DGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY-- 116 (359)
Q Consensus 43 ~~G~~l~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~-- 116 (359)
.++.++.++-. ...+++||+.+++|+....+... + .. +....-+.++....++.+|+....
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~--------~----~~-p~~R~~hs~~~~~~~~~lyv~GG~~~ 462 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSS--------S----EV-PVARMCHTFTTISRNNQLLLIGGRKA 462 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCC--------S----CC-CCCCBSCEEEEETTTTEEEEECCBSS
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCC--------C----CC-CccccceEEEEEccCCEEEEEcCCCC
Confidence 45664444432 24689999999988876511000 0 00 011112344444226778886321
Q ss_pred -----CcEEEEeCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCC
Q 018242 117 -----FGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATK 191 (359)
Q Consensus 117 -----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 191 (359)
+.+.+||+.+.+++.+... + ....-+..++-.+|+ ||+.--. ...+.+++||+.++
T Consensus 463 ~~~~~~dv~~yd~~t~~W~~~~~~-p--~~R~~h~~~~~~~~~-iyv~GG~---------------~~~~~v~~yd~~t~ 523 (695)
T 2zwa_A 463 PHQGLSDNWIFDMKTREWSMIKSL-S--HTRFRHSACSLPDGN-VLILGGV---------------TEGPAMLLYNVTEE 523 (695)
T ss_dssp TTCBCCCCEEEETTTTEEEECCCC-S--BCCBSCEEEECTTSC-EEEECCB---------------CSSCSEEEEETTTT
T ss_pred CCCccccEEEEeCCCCcEEECCCC-C--CCcccceEEEEcCCE-EEEECCC---------------CCCCCEEEEECCCC
Confidence 2489999999988765321 1 111223444435788 9987211 01116999999988
Q ss_pred cEEEEeCC--CCCC----ceEEEccCCCEEEEEecC-------CCEEEEEEcCCCC
Q 018242 192 QVTVLLGN--LSFP----NGVALSEDGNYILLAETT-------SCRILRYWLKTSK 234 (359)
Q Consensus 192 ~~~~~~~~--~~~p----~gia~~~d~~~l~v~~~~-------~~~i~~~~~~~~~ 234 (359)
+...+... ...| ..++++.+.+.+|+.+-. .+.+++||+..+.
T Consensus 524 ~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 524 IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 77765431 1112 235555553457887633 3579999987653
No 346
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=89.95 E-value=16 Score=36.05 Aligned_cols=111 Identities=14% Similarity=0.249 Sum_probs=63.2
Q ss_pred CCceEEEccCC-CeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccc-cCCcceEEEEecC-CCeEE
Q 018242 35 GPESLAFDALG-EGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEH-ICGRPLGLCFNKT-NGDLY 111 (359)
Q Consensus 35 ~p~~i~~~~~G-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~gi~~~~~-~g~l~ 111 (359)
...+|+++|+. .++|+.+..++|++.+..+..|+.+.... .... .......|++++. .+.+|
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~---------------~~~~~~~~~i~~i~~dp~~~~~v~ 88 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHF---------------QMDEYSYYGVESIATDPVDPNRVY 88 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTC---------------CGGGGGGGCEEEEEECSSSTTCEE
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCcc---------------CcccccCCCcceEEeCCCCCCEEE
Confidence 66789999862 34999887789999987777677642100 0000 0122457889974 46899
Q ss_pred EEeC---------CCcEEEEeCCCCeEEEEeecCC--C-ccc-cccceEEEeCC-CCEEEEEe
Q 018242 112 IADA---------YFGLLKVGPEGGLATAVATQSE--G-IPF-RFCNSLDIDQS-TGIIYFTD 160 (359)
Q Consensus 112 v~~~---------~~~i~~~~~~~~~~~~~~~~~~--~-~~~-~~~~~l~~d~~-g~~l~v~d 160 (359)
++.. ..+|++=.-.+..++.+..... . .+. .....|+++|. .+++|++.
T Consensus 89 v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 89 IVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp EEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred EEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 8853 1346554433344454432111 0 011 12367899875 23488873
No 347
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=89.77 E-value=8.7 Score=32.76 Aligned_cols=138 Identities=12% Similarity=0.151 Sum_probs=75.8
Q ss_pred CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC------CcEEEEeCCCCe
Q 018242 55 GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY------FGLLKVGPEGGL 128 (359)
Q Consensus 55 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~------~~i~~~~~~~~~ 128 (359)
..+..+|+.+++|+.....+ ....-++++.. ++.||+.... +.+.++|+.+++
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p-------------------~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 88 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELP-------------------SRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQ 88 (302)
T ss_dssp CCEEEEETTTTEEEEECCCS-------------------SCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTE
T ss_pred CcEEEEcCcCCcEeEcccCC-------------------cccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCc
Confidence 46889999998887764211 01112334433 6788886321 248999999998
Q ss_pred EEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCCCCCCc---e
Q 018242 129 ATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPN---G 205 (359)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~---g 205 (359)
.+.+..... + ..-+.+++ -+++ ||+.--.. .......++++|+.+++.+.+. ....|. .
T Consensus 89 W~~~~~~p~--~-r~~~~~~~-~~~~-iyv~GG~~------------~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~ 150 (302)
T 2xn4_A 89 WTSVANMRD--R-RSTLGAAV-LNGL-LYAVGGFD------------GSTGLSSVEAYNIKSNEWFHVA-PMNTRRSSVG 150 (302)
T ss_dssp EEEECCCSS--C-CBSCEEEE-ETTE-EEEEEEEC------------SSCEEEEEEEEETTTTEEEEEC-CCSSCCBSCE
T ss_pred eeeCCCCCc--c-ccceEEEE-ECCE-EEEEcCCC------------CCccCceEEEEeCCCCeEeecC-CCCCcccCce
Confidence 877643111 1 11223333 3566 88861100 0011246899999988776653 222222 2
Q ss_pred EEEccCCCEEEEEecC-------CCEEEEEEcCCC
Q 018242 206 VALSEDGNYILLAETT-------SCRILRYWLKTS 233 (359)
Q Consensus 206 ia~~~d~~~l~v~~~~-------~~~i~~~~~~~~ 233 (359)
.+. -++ .+|+..-. .+.+++||+..+
T Consensus 151 ~~~-~~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~ 183 (302)
T 2xn4_A 151 VGV-VGG-LLYAVGGYDVASRQCLSTVECYNATTN 183 (302)
T ss_dssp EEE-ETT-EEEEECCEETTTTEECCCEEEEETTTT
T ss_pred EEE-ECC-EEEEEeCCCCCCCccccEEEEEeCCCC
Confidence 222 244 47776422 346888987543
No 348
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=88.39 E-value=12 Score=32.34 Aligned_cols=141 Identities=14% Similarity=0.188 Sum_probs=73.8
Q ss_pred CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeCC-----C-------cEEEE
Q 018242 55 GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADAY-----F-------GLLKV 122 (359)
Q Consensus 55 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~~-----~-------~i~~~ 122 (359)
..+..||+.+++|.....+ ......-+.++ .. ++.||+.... . .+.++
T Consensus 24 ~~~~~yd~~~~~W~~~~~~------------------~~~~r~~~~~~-~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~ 83 (318)
T 2woz_A 24 TAAVAYDPMENECYLTALA------------------EQIPRNHSSIV-TQ-QNQVYVVGGLYVDEENKDQPLQSYFFQL 83 (318)
T ss_dssp SEEEEEETTTTEEEEEEEC------------------TTSCSSEEEEE-CS-SSCEEEEESSCC-------CCCBEEEEE
T ss_pred cceEEECCCCCceecccCC------------------ccCCccceEEE-EE-CCEEEEECCcccCccccCCCccccEEEE
Confidence 3589999999988763211 00111112332 23 7788876431 0 17889
Q ss_pred eCCCCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEEEEeCCCCC
Q 018242 123 GPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSF 202 (359)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~ 202 (359)
|+.+++.+.+..... + ..-+.+++. +++ ||+.--... . .......++++|+.+++.+.+. ....
T Consensus 84 d~~~~~W~~~~~~p~--~-r~~~~~~~~-~~~-iyv~GG~~~-~---------~~~~~~~~~~yd~~~~~W~~~~-~~p~ 147 (318)
T 2woz_A 84 DNVSSEWVGLPPLPS--A-RCLFGLGEV-DDK-IYVVAGKDL-Q---------TEASLDSVLCYDPVAAKWSEVK-NLPI 147 (318)
T ss_dssp ETTTTEEEECSCBSS--C-BCSCEEEEE-TTE-EEEEEEEBT-T---------TCCEEEEEEEEETTTTEEEEEC-CCSS
T ss_pred eCCCCcEEECCCCCc--c-ccccceEEE-CCE-EEEEcCccC-C---------CCcccceEEEEeCCCCCEeECC-CCCC
Confidence 999998876532111 1 122233333 566 888621000 0 0011246999999988776653 2222
Q ss_pred C---ceEEEccCCCEEEEEecC------CCEEEEEEcCCC
Q 018242 203 P---NGVALSEDGNYILLAETT------SCRILRYWLKTS 233 (359)
Q Consensus 203 p---~gia~~~d~~~l~v~~~~------~~~i~~~~~~~~ 233 (359)
+ ...+. .++ .+|+..-. .+.+++||+..+
T Consensus 148 ~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 148 KVYGHNVIS-HNG-MIYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp CEESCEEEE-ETT-EEEEECCEESSSCBCCCEEEEETTTT
T ss_pred cccccEEEE-ECC-EEEEEcCCCCCCCccceEEEEcCCCC
Confidence 2 12222 344 47776532 246889987543
No 349
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=87.66 E-value=14 Score=32.40 Aligned_cols=154 Identities=10% Similarity=0.040 Sum_probs=68.3
Q ss_pred CEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCCCeEEEEeC-------CCcEEEEeC--C
Q 018242 55 GRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTNGDLYIADA-------YFGLLKVGP--E 125 (359)
Q Consensus 55 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~g~l~v~~~-------~~~i~~~~~--~ 125 (359)
..+.+||+.+++|+.....+ .....-++++.. ++.||+... ...+..++. +
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p------------------~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~d~~ 227 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESP------------------WYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDFTGN 227 (357)
T ss_dssp CEEEEEETTTTEEEEEEECS------------------SCCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEECC--
T ss_pred ccEEEEeCCCCcEEECCCCC------------------CCCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEecCC
Confidence 57999999999888774221 000111344444 678887632 234777765 7
Q ss_pred CCeEEEEeecCCCccccccceEEEeCCCCEEEEEeCCCcccccc--ce-eee--ee-cCCCceEEEEeCCCCcEEEEeCC
Q 018242 126 GGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRN--HI-SVI--LS-GDKTGRLMKYDPATKQVTVLLGN 199 (359)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~l~~d~~g~~l~v~d~~~~~~~~~--~~-~~~--~~-~~~~g~v~~~d~~~~~~~~~~~~ 199 (359)
+.+++.+..... +......-++..+++ ||+.--.. ..... +. ... .. ......+.+||+++++.+.+. .
T Consensus 228 ~~~W~~~~~~~~--~~~~~~~~~~~~~~~-iyv~GG~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~-~ 302 (357)
T 2uvk_A 228 NLKWNKLAPVSS--PDGVAGGFAGISNDS-LIFAGGAG-FKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG-E 302 (357)
T ss_dssp -CEEEECCCSST--TTCCBSCEEEEETTE-EEEECCEE-CTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE-E
T ss_pred CCcEEecCCCCC--CcccccceEEEECCE-EEEEcCcc-ccCCcccccccceeccccccceeeEEEEecCCCceeeCC-C
Confidence 777766533211 111111223334566 88872100 00000 00 000 00 001125788999877766543 2
Q ss_pred CCCCc--eEEEccCCCEEEEEecCC------CEEEEEEcCCCC
Q 018242 200 LSFPN--GVALSEDGNYILLAETTS------CRILRYWLKTSK 234 (359)
Q Consensus 200 ~~~p~--gia~~~d~~~l~v~~~~~------~~i~~~~~~~~~ 234 (359)
+..|. ..+...+++ +|+..-.+ +.++++++++++
T Consensus 303 ~p~~r~~~~~~~~~~~-i~v~GG~~~~~~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 303 LSQGRAYGVSLPWNNS-LLIIGGETAGGKAVTDSVLITVKDNK 344 (357)
T ss_dssp CSSCCBSSEEEEETTE-EEEEEEECGGGCEEEEEEEEEC-CCS
T ss_pred CCCCcccceeEEeCCE-EEEEeeeCCCCCEeeeEEEEEEcCcE
Confidence 22222 222333555 55544321 357777776554
No 350
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=85.01 E-value=20 Score=31.68 Aligned_cols=25 Identities=28% Similarity=0.141 Sum_probs=18.8
Q ss_pred CCeEEEEeCCCcEEEEeCCCCeEEE
Q 018242 107 NGDLYIADAYFGLLKVGPEGGLATA 131 (359)
Q Consensus 107 ~g~l~v~~~~~~i~~~~~~~~~~~~ 131 (359)
++.+|+++..+.|+.+|.++|+..-
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W 34 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIW 34 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEE
Confidence 5677888777778888888887654
No 351
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=84.17 E-value=5.8 Score=35.13 Aligned_cols=23 Identities=4% Similarity=-0.031 Sum_probs=19.2
Q ss_pred eeEEecCCCEEEEEEcCCcceEE
Q 018242 47 GPYTGVSDGRIIKWHQDQRRWLH 69 (359)
Q Consensus 47 ~l~~~~~~~~i~~~d~~~~~~~~ 69 (359)
++|+++.+|.|+.+|.++++...
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W 34 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIW 34 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEE
Confidence 48999999999999998876444
No 352
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=81.18 E-value=36 Score=33.67 Aligned_cols=161 Identities=13% Similarity=0.048 Sum_probs=77.4
Q ss_pred ceEEEccC-CCeeEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEec-CCCeEEEEe
Q 018242 37 ESLAFDAL-GEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNK-TNGDLYIAD 114 (359)
Q Consensus 37 ~~i~~~~~-G~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~-~~g~l~v~~ 114 (359)
..+++++. ..++|++. ++.|++-.-.+..|+.+... +........-|.+.+ .+++||++.
T Consensus 591 ~~i~~d~~~~~~~y~g~-~g~v~~S~DgG~tW~~~~~~-----------------lp~~~~~~~~i~~~~~~~~~l~~~~ 652 (763)
T 3a0f_A 591 TGIAADRVQANTFYVYV-EGDFFVSTDGGKSYTKKGNG-----------------LPCCWTYTGTPVTSNLRAGELWVSV 652 (763)
T ss_dssp SCEEECSSSTTCEEEEE-TTEEEEESSTTSBCEEECBT-----------------SCCSSCCCEEEEECSSSTTCEEEEE
T ss_pred ceEEEeccCCCEEEEEc-CCCEEEEeCCCcCccccccC-----------------CCcccCccccEEECCCCCCcEEEEc
Confidence 36777763 34588874 47777654344446554210 000000111156665 468899988
Q ss_pred CCCcEEEEeCCCCeEEEEeecCCCcccc--ccceEEEe-CCCCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCC
Q 018242 115 AYFGLLKVGPEGGLATAVATQSEGIPFR--FCNSLDID-QSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATK 191 (359)
Q Consensus 115 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~d-~~g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 191 (359)
...+|++-+-.+..++.+.. ....... .-.++++. ++...||+.-.. .....++||+-+..+.
T Consensus 653 ~~~~l~~S~D~G~tW~~~~~-~~~~~~~~~~~~g~~~~~~~~~~l~~~G~~-------------~~~~~~gl~~S~D~G~ 718 (763)
T 3a0f_A 653 KGVGIYHSTDFGNTFTALAG-SGSSLNPAVFSIGAPQTPNATETLFLWGIP-------------SASQPEGLYMSTDNGG 718 (763)
T ss_dssp TTTEEEEESSTTSBCEECTT-BTTTBEEEEEEEECCSSTTSSCEEEEEEEC-------------STTSCSEEEEESSTTS
T ss_pred CCCeEEEEcCCCCCceEccC-CCcccccceeEEeeecCCCCCceEEEEEEc-------------ccCCCcEEEEeCCCCC
Confidence 66677776544445554421 1110000 00011212 222337776200 0012457887765555
Q ss_pred cEEEEe---CCCCCCceEEEccCC-CEEEEEecCCCEEEEEEc
Q 018242 192 QVTVLL---GNLSFPNGVALSEDG-NYILLAETTSCRILRYWL 230 (359)
Q Consensus 192 ~~~~~~---~~~~~p~gia~~~d~-~~l~v~~~~~~~i~~~~~ 230 (359)
..+.+. ..+..+..|+++|.. ..||++. ....|+.-++
T Consensus 719 tW~~~~~~~~~~~~~~~i~~~p~~~~~v~~~T-~GrGi~~g~~ 760 (763)
T 3a0f_A 719 LWTRLNDDAHNYGGATVISGDPRIYGRVYIGM-NGRGIICAQA 760 (763)
T ss_dssp CCEECSCTTCCTBCEEEEEECTTSTTEEEEEE-BSSCEEEEES
T ss_pred CcEeccCccccCCCcceEEeCCCCCCEEEEeC-CCCeEEEEec
Confidence 555554 222223367777743 3477764 4456666554
No 353
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=79.57 E-value=28 Score=34.31 Aligned_cols=120 Identities=13% Similarity=0.167 Sum_probs=68.4
Q ss_pred cceEEEEecCC-CeEEEEeCCCcEEEEeCCCCeEEEEeecCCCc--cccccceEEEeCC-CCEEEEEeCCC--ccccccc
Q 018242 97 RPLGLCFNKTN-GDLYIADAYFGLLKVGPEGGLATAVATQSEGI--PFRFCNSLDIDQS-TGIIYFTDSSS--QFQRRNH 170 (359)
Q Consensus 97 ~p~gi~~~~~~-g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~d~~-g~~l~v~d~~~--~~~~~~~ 170 (359)
...+|++++.+ +.+|++...++|+|-+-.+...+.+....... ....+..|++||. -+++|++.... .+.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~---- 99 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWL---- 99 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSS----
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccc----
Confidence 56789999854 77888876678999887777777653311101 1235678999973 23399984320 010
Q ss_pred eeeeeecCCCceEEEEeCCCCcEEEEeCCCC---------CCceEEEccC-CCEEEEEecCCCEEEE
Q 018242 171 ISVILSGDKTGRLMKYDPATKQVTVLLGNLS---------FPNGVALSED-GNYILLAETTSCRILR 227 (359)
Q Consensus 171 ~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~---------~p~gia~~~d-~~~l~v~~~~~~~i~~ 227 (359)
...+.|++-.-.+...+.+..... ....|+++|. .+.+|+.......|++
T Consensus 100 -------~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~ 159 (737)
T 2cn3_A 100 -------PNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWR 159 (737)
T ss_dssp -------CCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEE
T ss_pred -------cCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEE
Confidence 012457766544445544432211 1257889874 3557775423256664
No 354
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=78.82 E-value=30 Score=34.42 Aligned_cols=119 Identities=13% Similarity=0.132 Sum_probs=66.4
Q ss_pred CcceEEEEecCC-CeEEEEeCCCcEEEEeCCCCeEEEEeecCCCc--cccccceEEEeCC-CCEEEEEeCCCccccccce
Q 018242 96 GRPLGLCFNKTN-GDLYIADAYFGLLKVGPEGGLATAVATQSEGI--PFRFCNSLDIDQS-TGIIYFTDSSSQFQRRNHI 171 (359)
Q Consensus 96 ~~p~gi~~~~~~-g~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~d~~-g~~l~v~d~~~~~~~~~~~ 171 (359)
+...+|++++.+ +.+|++....+|+|-+-.+...+.+....... ....+.+|++++. .+++|++.....
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~------- 87 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYV------- 87 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCT-------
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccC-------
Confidence 456789998753 77888876678888776666676543211100 1235778999974 234888732100
Q ss_pred eeeeecCCCceEEEEeCCCCcEEEEeCCCC---------CCceEEEccC-CCEEEEEecCCCEEEE
Q 018242 172 SVILSGDKTGRLMKYDPATKQVTVLLGNLS---------FPNGVALSED-GNYILLAETTSCRILR 227 (359)
Q Consensus 172 ~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~---------~p~gia~~~d-~~~l~v~~~~~~~i~~ 227 (359)
....+.|++-+..+...+.+..... ....++++|. .+.+|+. ...+.|++
T Consensus 88 -----~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g-~~~~gl~~ 147 (789)
T 1sqj_A 88 -----GDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMG-TRTEGIWK 147 (789)
T ss_dssp -----TSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEE-CSSSCEEE
T ss_pred -----CCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEE-eccCCEEE
Confidence 0001567766544445554432211 1246888874 3445654 33456665
No 355
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=59.52 E-value=75 Score=31.01 Aligned_cols=99 Identities=15% Similarity=0.133 Sum_probs=48.1
Q ss_pred CCcEEEEeCCCCeEEEEeecCCCccccccceEEEeCC-CCEEEEEeCCCccccccceeeeeecCCCceEEEEeCCCCcEE
Q 018242 116 YFGLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQS-TGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVT 194 (359)
Q Consensus 116 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~-g~~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 194 (359)
.++|+|-+-.+..++.+..............|+++|. .+.+|++..... ....+.|++-+-.+...+
T Consensus 64 ~ggvyrS~DgG~TW~~v~~~~~~~~~~~~~~IavdP~dp~~vyvag~~~~------------~~~~g~v~rS~DgG~TW~ 131 (685)
T 3f6k_A 64 QSKLYRSEDYGKNFKDITDLINNTFIRTEFGMAIGPENSGKVVLTAEVSG------------GSRGGRIFRSSDFAKNFV 131 (685)
T ss_dssp EEEEEEESSTTSSCEECGGGGTTCCBCGGGCEEECSTTCCCEEEEECCCT------------TCSSCEEEEESSTTSSCE
T ss_pred CCeEEEEeCCCCCceECcCCCCCCcccceeEEEECCCCCCEEEEEEeccC------------CCCCceEEEECCCCceeE
Confidence 3467766555555665543222111223467999984 323888742110 012456777655444555
Q ss_pred EEeCCCCCCceEEEccCC-CEEEEEecCCCEEEE
Q 018242 195 VLLGNLSFPNGVALSEDG-NYILLAETTSCRILR 227 (359)
Q Consensus 195 ~~~~~~~~p~gia~~~d~-~~l~v~~~~~~~i~~ 227 (359)
.+.........++++|.. +.+|+.. ..+.|++
T Consensus 132 ~~~~p~~~~~~l~~~P~~~~~l~a~~-~~~gly~ 164 (685)
T 3f6k_A 132 QTDLPFHPLTQMMYSPQNSDYLLALS-TENGLWV 164 (685)
T ss_dssp EEECSSCBSSCCEEETTEEEEEEEEB-TTCCEEE
T ss_pred eccCCCCCceEEEEecCCCCEEEEEE-CCCCEEE
Confidence 543222211257777643 3345443 3345555
No 356
>1z65_A PRPLP, prion-like protein doppel, doppelganger; transmembrane helix, DHPC, mouse doppel, unknown function; NMR {Synthetic}
Probab=55.02 E-value=8.7 Score=20.09 Aligned_cols=19 Identities=21% Similarity=0.254 Sum_probs=15.6
Q ss_pred CCCchhHHHHHHHHHHHhh
Q 018242 1 MNSSLSFIAKSIVIFLFIN 19 (359)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~ 19 (359)
|++.+...-+.++|+++++
T Consensus 1 MrkhLG~~wlai~c~LLfs 19 (30)
T 1z65_A 1 MKNRLGTWWVAILCMLLAS 19 (30)
T ss_dssp CCSSCSSHHHHHHHHHHHH
T ss_pred CcchhhhhHHHHHHHHHHh
Confidence 7788888878888888886
No 357
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=40.31 E-value=2.7e+02 Score=27.10 Aligned_cols=91 Identities=3% Similarity=0.015 Sum_probs=43.0
Q ss_pred eEEecCCCEEEEEEcCCcceEEEeecCCCCCCCCCCcccccccccccCCcceEEEEecCC-CeEEEEeC------CCcEE
Q 018242 48 PYTGVSDGRIIKWHQDQRRWLHFARTSPNRDGCEGAYEYDHAAKEHICGRPLGLCFNKTN-GDLYIADA------YFGLL 120 (359)
Q Consensus 48 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~-g~l~v~~~------~~~i~ 120 (359)
+++.+..++|++.+-.+..|+.+..... .........|+++|.+ +++|++.. .++|+
T Consensus 58 ~~~~t~~ggvyrS~DgG~TW~~v~~~~~----------------~~~~~~~~~IavdP~dp~~vyvag~~~~~~~~g~v~ 121 (685)
T 3f6k_A 58 VIMTFGQSKLYRSEDYGKNFKDITDLIN----------------NTFIRTEFGMAIGPENSGKVVLTAEVSGGSRGGRIF 121 (685)
T ss_dssp -----CEEEEEEESSTTSSCEECGGGGT----------------TCCBCGGGCEEECSTTCCCEEEEECCCTTCSSCEEE
T ss_pred eEEeecCCeEEEEeCCCCCceECcCCCC----------------CCcccceeEEEECCCCCCEEEEEEeccCCCCCceEE
Confidence 4555556788888766666766431100 0000112468888854 47887754 34466
Q ss_pred EEeCCCCeEEEEeecCCCccccccceEEEeCCC-CEEEEE
Q 018242 121 KVGPEGGLATAVATQSEGIPFRFCNSLDIDQST-GIIYFT 159 (359)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~g-~~l~v~ 159 (359)
+=+-.+..++.+..... ....|+++|.. +.||+.
T Consensus 122 rS~DgG~TW~~~~~p~~-----~~~~l~~~P~~~~~l~a~ 156 (685)
T 3f6k_A 122 RSSDFAKNFVQTDLPFH-----PLTQMMYSPQNSDYLLAL 156 (685)
T ss_dssp EESSTTSSCEEEECSSC-----BSSCCEEETTEEEEEEEE
T ss_pred EECCCCceeEeccCCCC-----CceEEEEecCCCCEEEEE
Confidence 54433344554432111 11256777642 225554
No 358
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=33.66 E-value=68 Score=22.81 Aligned_cols=22 Identities=14% Similarity=0.107 Sum_probs=17.1
Q ss_pred CCeEEEEeCCCcEEEEeCCCCeE
Q 018242 107 NGDLYIADAYFGLLKVGPEGGLA 129 (359)
Q Consensus 107 ~g~l~v~~~~~~i~~~~~~~~~~ 129 (359)
...||++...+| ++|+...+++
T Consensus 57 ~~QIWlaSp~sG-~hfd~~~~~W 78 (106)
T 1ew4_A 57 LHQVWLATKQGG-YHFDLKGDEW 78 (106)
T ss_dssp TTEEEEECSSCE-EEEEEETTEE
T ss_pred hhhheEecCCCc-eeeeecCCEE
Confidence 778999887778 8888766654
No 359
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=32.00 E-value=3.3e+02 Score=25.74 Aligned_cols=20 Identities=20% Similarity=0.150 Sum_probs=16.5
Q ss_pred CeEEEEeCCCcEEEEeCCCC
Q 018242 108 GDLYIADAYFGLLKVGPEGG 127 (359)
Q Consensus 108 g~l~v~~~~~~i~~~~~~~~ 127 (359)
..+|+++..+.|+|+|+.+.
T Consensus 266 D~~YaGDl~GnlWRfDl~~~ 285 (570)
T 3hx6_A 266 DYAYAGDLQGNLWRFDLIAG 285 (570)
T ss_dssp CEEEEEETTSEEEEEECSCS
T ss_pred eEEEEEeCCCcEEEEEcCCC
Confidence 45999998888999998654
No 360
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=28.09 E-value=91 Score=27.75 Aligned_cols=76 Identities=9% Similarity=0.099 Sum_probs=0.0
Q ss_pred ccCCCEEEEEecCCC--EEEEEEcCCCCCcceeEeec-CC---CCC-CceEECCCCCEEEEEecCCCccccccccCCccc
Q 018242 209 SEDGNYILLAETTSC--RILRYWLKTSKAGTIEIVAQ-LP---GFP-DNIKRSPRGGFWVGIHSRRKGISKLVLSFPWIG 281 (359)
Q Consensus 209 ~~d~~~l~v~~~~~~--~i~~~~~~~~~~~~~~~~~~-~~---~~p-~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~g 281 (359)
..+.++||.-+...+ .|..+|++..+....-.+.. .| +.+ .++.+-....+|+.+..... +..++..|
T Consensus 36 ~~~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~~~-----i~l~n~~G 110 (369)
T 3s9j_A 36 ENGKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNISR-----LSSINSQG 110 (369)
T ss_dssp ETTEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGGTE-----EEEECTTC
T ss_pred cCCcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCcce-----EEEECCCc
Q ss_pred eeeecCCc
Q 018242 282 NVLIKLPI 289 (359)
Q Consensus 282 ~~~~~~~~ 289 (359)
+.+..+.+
T Consensus 111 ~~~~k~~~ 118 (369)
T 3s9j_A 111 EIIRNYNF 118 (369)
T ss_dssp CEEEEEEC
T ss_pred eEEEEEec
Done!