Query 018243
Match_columns 359
No_of_seqs 192 out of 2114
Neff 11.0
Searched_HMMs 29240
Date Mon Mar 25 12:10:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018243.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018243hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jg8_A L-ALLO-threonine aldola 100.0 1.7E-42 6E-47 304.0 29.0 342 4-353 4-346 (347)
2 3pj0_A LMO0305 protein; struct 100.0 1.7E-37 5.9E-42 273.5 30.1 328 9-349 20-358 (359)
3 1v72_A Aldolase; PLP-dependent 100.0 5.6E-37 1.9E-41 269.9 30.5 339 2-354 6-354 (356)
4 3lws_A Aromatic amino acid bet 100.0 1E-36 3.5E-41 268.3 29.1 306 31-350 40-356 (357)
5 3tqx_A 2-amino-3-ketobutyrate 100.0 1.7E-36 5.9E-41 270.9 30.5 331 4-354 44-397 (399)
6 3aow_A Putative uncharacterize 100.0 1.1E-35 3.7E-40 268.8 30.0 335 3-355 76-447 (448)
7 2w8t_A SPT, serine palmitoyltr 100.0 6.9E-36 2.3E-40 269.0 27.3 331 4-355 65-417 (427)
8 1fc4_A 2-amino-3-ketobutyrate 100.0 2.1E-35 7E-40 264.1 29.7 332 3-354 45-398 (401)
9 1v2d_A Glutamine aminotransfer 100.0 1E-35 3.4E-40 264.3 27.5 329 4-357 26-375 (381)
10 3ffh_A Histidinol-phosphate am 100.0 5.6E-35 1.9E-39 257.8 29.9 318 4-350 33-363 (363)
11 3nra_A Aspartate aminotransfer 100.0 8.2E-36 2.8E-40 267.3 24.6 332 4-354 40-406 (407)
12 1gd9_A Aspartate aminotransfer 100.0 3.1E-35 1.1E-39 261.9 27.6 330 4-353 27-386 (389)
13 2zyj_A Alpha-aminodipate amino 100.0 3.4E-35 1.2E-39 262.3 27.9 335 3-355 32-395 (397)
14 3ly1_A Putative histidinol-pho 100.0 3.1E-35 1E-39 258.6 27.2 323 3-352 16-351 (354)
15 1vp4_A Aminotransferase, putat 100.0 3.2E-35 1.1E-39 264.6 27.8 344 3-358 43-423 (425)
16 1o4s_A Aspartate aminotransfer 100.0 4.9E-35 1.7E-39 260.5 28.6 325 4-351 42-387 (389)
17 1j32_A Aspartate aminotransfer 100.0 6.4E-35 2.2E-39 259.8 29.3 332 3-353 30-387 (388)
18 3euc_A Histidinol-phosphate am 100.0 2E-35 6.8E-40 261.1 24.5 317 3-351 30-366 (367)
19 3get_A Histidinol-phosphate am 100.0 4.5E-35 1.6E-39 258.6 26.5 319 3-350 30-364 (365)
20 3kki_A CAI-1 autoinducer synth 100.0 4.6E-35 1.6E-39 262.4 26.9 324 3-353 59-404 (409)
21 3dyd_A Tyrosine aminotransfera 100.0 6.2E-35 2.1E-39 262.7 27.7 332 4-354 55-425 (427)
22 2dr1_A PH1308 protein, 386AA l 100.0 3.1E-34 1.1E-38 255.2 32.0 328 6-357 21-383 (386)
23 1bs0_A Protein (8-amino-7-oxon 100.0 1.6E-34 5.4E-39 256.9 29.6 322 4-349 40-383 (384)
24 2dou_A Probable N-succinyldiam 100.0 7.3E-35 2.5E-39 258.3 27.2 325 4-350 26-375 (376)
25 3g0t_A Putative aminotransfera 100.0 3.6E-35 1.2E-39 265.5 25.7 331 3-352 44-436 (437)
26 1t3i_A Probable cysteine desul 100.0 7E-35 2.4E-39 262.3 27.4 330 5-355 29-415 (420)
27 3a2b_A Serine palmitoyltransfe 100.0 2.1E-34 7E-39 257.3 29.9 328 4-354 44-393 (398)
28 2zc0_A Alanine glyoxylate tran 100.0 1.2E-34 4.2E-39 259.6 28.0 333 4-355 35-406 (407)
29 2o1b_A Aminotransferase, class 100.0 7.8E-35 2.7E-39 260.3 26.6 329 4-353 48-403 (404)
30 1b5p_A Protein (aspartate amin 100.0 1.4E-34 4.8E-39 257.2 28.0 328 4-351 32-383 (385)
31 1xi9_A Putative transaminase; 100.0 5.6E-35 1.9E-39 261.6 24.9 332 4-354 39-404 (406)
32 3ezs_A Aminotransferase ASPB; 100.0 1E-34 3.4E-39 257.4 25.9 321 4-353 24-375 (376)
33 3h14_A Aminotransferase, class 100.0 9.6E-35 3.3E-39 258.9 25.1 333 3-358 31-387 (391)
34 2x5d_A Probable aminotransfera 100.0 2.9E-34 1E-38 257.4 28.3 332 4-354 38-399 (412)
35 3fdb_A Beta C-S lyase, putativ 100.0 7.9E-35 2.7E-39 258.2 24.2 327 3-353 23-376 (377)
36 3b46_A Aminotransferase BNA3; 100.0 1.4E-34 4.8E-39 261.9 26.2 327 3-348 57-442 (447)
37 1u08_A Hypothetical aminotrans 100.0 4.2E-34 1.4E-38 254.3 28.8 326 4-348 31-385 (386)
38 2o0r_A RV0858C (N-succinyldiam 100.0 1.1E-34 3.8E-39 260.1 24.8 333 3-354 25-397 (411)
39 1yiz_A Kynurenine aminotransfe 100.0 3.8E-34 1.3E-38 258.1 28.2 330 4-352 38-428 (429)
40 2gb3_A Aspartate aminotransfer 100.0 3.1E-34 1.1E-38 256.9 27.1 329 4-356 44-405 (409)
41 3jtx_A Aminotransferase; NP_28 100.0 6.5E-34 2.2E-38 254.0 28.9 325 3-350 30-395 (396)
42 2z9v_A Aspartate aminotransfer 100.0 9.3E-34 3.2E-38 252.6 29.7 331 4-354 8-372 (392)
43 3dzz_A Putative pyridoxal 5'-p 100.0 6.3E-34 2.2E-38 253.6 28.0 332 4-353 28-389 (391)
44 3zrp_A Serine-pyruvate aminotr 100.0 1.7E-33 5.8E-38 250.3 30.5 323 6-355 4-365 (384)
45 1iay_A ACC synthase 2, 1-amino 100.0 6.3E-34 2.2E-38 256.5 28.1 336 4-352 37-426 (428)
46 3ele_A Amino transferase; RER0 100.0 1.6E-34 5.4E-39 258.1 23.6 329 3-354 35-397 (398)
47 2x5f_A Aspartate_tyrosine_phen 100.0 5.7E-34 1.9E-38 257.0 27.2 333 3-353 47-429 (430)
48 3kax_A Aminotransferase, class 100.0 1.9E-33 6.6E-38 249.8 29.6 330 3-350 24-382 (383)
49 3piu_A 1-aminocyclopropane-1-c 100.0 5.8E-33 2E-37 250.7 33.1 337 5-354 40-433 (435)
50 1svv_A Threonine aldolase; str 100.0 6.5E-34 2.2E-38 250.6 26.2 335 3-353 13-358 (359)
51 3ftb_A Histidinol-phosphate am 100.0 4.4E-34 1.5E-38 251.9 25.1 318 3-352 26-360 (361)
52 3op7_A Aminotransferase class 100.0 8.4E-34 2.9E-38 251.4 26.9 313 18-355 46-373 (375)
53 1kmj_A Selenocysteine lyase; p 100.0 8.6E-34 2.9E-38 254.0 26.8 326 5-353 24-405 (406)
54 3fvs_A Kynurenine--oxoglutarat 100.0 5E-34 1.7E-38 256.8 25.3 330 3-352 28-421 (422)
55 2z61_A Probable aspartate amin 100.0 8.4E-34 2.9E-38 250.9 25.9 315 4-351 30-369 (370)
56 1bw0_A TAT, protein (tyrosine 100.0 4.8E-34 1.6E-38 256.4 24.1 333 4-355 34-415 (416)
57 1c7n_A Cystalysin; transferase 100.0 4.7E-33 1.6E-37 248.7 29.7 334 4-356 32-396 (399)
58 3tcm_A Alanine aminotransferas 100.0 3.5E-33 1.2E-37 255.5 28.8 318 31-358 127-499 (500)
59 4dq6_A Putative pyridoxal phos 100.0 4.5E-33 1.6E-37 248.1 28.5 329 3-350 32-390 (391)
60 1iug_A Putative aspartate amin 100.0 4E-33 1.4E-37 245.0 27.6 317 11-353 7-348 (352)
61 3ppl_A Aspartate aminotransfer 100.0 4.5E-33 1.6E-37 250.8 28.3 335 4-357 34-424 (427)
62 3ez1_A Aminotransferase MOCR f 100.0 2.6E-33 8.9E-38 252.2 26.5 336 4-356 26-418 (423)
63 1lc5_A COBD, L-threonine-O-3-p 100.0 3.2E-33 1.1E-37 246.6 26.5 320 4-354 25-361 (364)
64 2bwn_A 5-aminolevulinate synth 100.0 9.5E-33 3.2E-37 246.8 29.6 327 5-353 48-400 (401)
65 3rq1_A Aminotransferase class 100.0 4.9E-33 1.7E-37 250.0 27.4 332 4-354 39-416 (418)
66 3nnk_A Ureidoglycine-glyoxylat 100.0 3.2E-33 1.1E-37 250.8 26.1 327 7-355 15-392 (411)
67 1ax4_A Tryptophanase; tryptoph 100.0 2.5E-32 8.7E-37 248.9 31.2 336 4-354 44-442 (467)
68 1d2f_A MALY protein; aminotran 100.0 1.3E-32 4.6E-37 244.9 28.6 330 4-353 29-389 (390)
69 4hvk_A Probable cysteine desul 100.0 7.8E-33 2.7E-37 245.7 27.0 326 6-356 2-376 (382)
70 3kgw_A Alanine-glyoxylate amin 100.0 6.1E-33 2.1E-37 247.4 26.1 322 12-355 30-390 (393)
71 4eb5_A Probable cysteine desul 100.0 4E-33 1.4E-37 247.7 24.7 325 5-355 3-375 (382)
72 2oga_A Transaminase; PLP-depen 100.0 3.2E-33 1.1E-37 249.5 23.9 322 3-353 30-396 (399)
73 1eg5_A Aminotransferase; PLP-d 100.0 6.7E-33 2.3E-37 246.4 25.4 327 6-355 3-378 (384)
74 2huf_A Alanine glyoxylate amin 100.0 8.9E-33 3.1E-37 246.4 26.2 328 5-355 20-385 (393)
75 1m32_A 2-aminoethylphosphonate 100.0 2.6E-33 8.9E-38 247.4 22.5 328 4-353 4-365 (366)
76 3e2y_A Kynurenine-oxoglutarate 100.0 3.4E-33 1.2E-37 250.5 23.4 327 3-348 23-408 (410)
77 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 6.1E-34 2.1E-38 251.9 18.1 329 3-353 7-370 (371)
78 1b9h_A AHBA synthase, protein 100.0 2.1E-32 7.3E-37 243.5 28.0 313 18-352 17-387 (388)
79 3isl_A Purine catabolism prote 100.0 1.4E-32 4.7E-37 247.0 26.6 320 13-354 19-391 (416)
80 3f0h_A Aminotransferase; RER07 100.0 8E-32 2.7E-36 238.8 31.1 317 13-352 27-373 (376)
81 3lvm_A Cysteine desulfurase; s 100.0 1.8E-32 6.1E-37 246.8 27.1 329 3-355 21-401 (423)
82 2yrr_A Aminotransferase, class 100.0 1.4E-32 4.9E-37 241.4 25.9 314 12-352 7-352 (353)
83 3d6k_A Putative aminotransfera 100.0 9.2E-33 3.2E-37 248.3 25.2 331 5-355 34-420 (422)
84 3l8a_A METC, putative aminotra 100.0 6.2E-33 2.1E-37 249.4 23.5 332 3-351 61-420 (421)
85 3t18_A Aminotransferase class 100.0 1.2E-32 4E-37 247.2 25.0 330 4-355 38-412 (413)
86 1elu_A L-cysteine/L-cystine C- 100.0 1.4E-33 4.7E-38 251.4 18.7 324 4-349 16-388 (390)
87 2r2n_A Kynurenine/alpha-aminoa 100.0 7.6E-32 2.6E-36 242.6 30.2 309 34-353 74-424 (425)
88 3uwc_A Nucleotide-sugar aminot 100.0 5E-33 1.7E-37 246.3 22.1 323 1-353 4-371 (374)
89 1vjo_A Alanine--glyoxylate ami 100.0 2.6E-32 8.9E-37 243.4 25.5 318 8-351 37-393 (393)
90 3cai_A Possible aminotransfera 100.0 2.4E-32 8.3E-37 244.6 25.4 319 5-348 27-404 (406)
91 3if2_A Aminotransferase; YP_26 100.0 7.5E-32 2.6E-36 244.2 28.8 337 3-355 31-442 (444)
92 2ez2_A Beta-tyrosinase, tyrosi 100.0 7E-32 2.4E-36 245.2 28.4 336 4-354 43-432 (456)
93 2oqx_A Tryptophanase; lyase, p 100.0 1.1E-32 3.7E-37 251.3 23.1 337 3-354 41-443 (467)
94 1mdo_A ARNB aminotransferase; 100.0 7.5E-32 2.6E-36 240.4 27.3 323 3-355 8-388 (393)
95 1fg7_A Histidinol phosphate am 100.0 6.7E-32 2.3E-36 237.2 26.5 308 4-349 30-354 (356)
96 3hdo_A Histidinol-phosphate am 100.0 1.2E-31 4.1E-36 236.2 28.1 313 4-354 27-356 (360)
97 2ch1_A 3-hydroxykynurenine tra 100.0 5.5E-32 1.9E-36 241.5 26.1 322 10-355 23-385 (396)
98 2fnu_A Aminotransferase; prote 100.0 1.7E-31 5.8E-36 236.6 29.0 322 5-354 3-373 (375)
99 2pb2_A Acetylornithine/succiny 100.0 1.1E-31 3.8E-36 240.8 27.9 326 4-353 58-418 (420)
100 3f6t_A Aspartate aminotransfer 100.0 2.6E-32 8.7E-37 251.2 24.1 335 4-356 104-528 (533)
101 3cq5_A Histidinol-phosphate am 100.0 1.1E-31 3.9E-36 237.1 27.2 313 5-351 32-366 (369)
102 3f9t_A TDC, L-tyrosine decarbo 100.0 1E-31 3.5E-36 239.8 27.0 315 14-351 40-396 (397)
103 2eh6_A Acoat, acetylornithine 100.0 6.7E-32 2.3E-36 239.2 23.8 317 4-350 29-375 (375)
104 3p1t_A Putative histidinol-pho 100.0 2.2E-31 7.6E-36 232.4 26.3 309 3-351 16-335 (337)
105 3ruy_A Ornithine aminotransfer 100.0 1.2E-31 4.3E-36 238.8 24.7 322 3-350 36-391 (392)
106 3ju7_A Putative PLP-dependent 100.0 6.2E-32 2.1E-36 238.5 22.4 327 3-353 2-375 (377)
107 3frk_A QDTB; aminotransferase, 100.0 1.1E-32 3.7E-37 244.0 17.5 323 1-352 1-367 (373)
108 3ei9_A LL-diaminopimelate amin 100.0 7.3E-32 2.5E-36 243.4 23.0 323 4-353 57-428 (432)
109 2bkw_A Alanine-glyoxylate amin 100.0 5.2E-31 1.8E-35 234.3 28.1 325 2-353 3-384 (385)
110 1z7d_A Ornithine aminotransfer 100.0 6.1E-31 2.1E-35 236.7 28.8 328 4-355 66-431 (433)
111 2oat_A Ornithine aminotransfer 100.0 5.1E-31 1.7E-35 237.6 27.9 328 3-352 76-438 (439)
112 2ord_A Acoat, acetylornithine 100.0 5.8E-32 2E-36 241.4 21.4 322 4-352 41-396 (397)
113 3dr4_A Putative perosamine syn 100.0 6.9E-32 2.4E-36 240.4 21.8 319 6-350 25-390 (391)
114 3qgu_A LL-diaminopimelate amin 100.0 6.7E-32 2.3E-36 244.8 21.7 324 4-355 70-442 (449)
115 3ffr_A Phosphoserine aminotran 100.0 3.7E-31 1.3E-35 233.3 25.9 282 38-350 43-361 (362)
116 2vi8_A Serine hydroxymethyltra 100.0 1.3E-30 4.5E-35 233.3 29.5 329 5-354 26-388 (405)
117 3g7q_A Valine-pyruvate aminotr 100.0 4.8E-31 1.6E-35 237.0 26.2 334 3-355 31-415 (417)
118 1vef_A Acetylornithine/acetyl- 100.0 3E-31 1E-35 236.6 24.5 324 4-350 46-394 (395)
119 3ihj_A Alanine aminotransferas 100.0 1.3E-30 4.4E-35 238.1 29.2 326 18-357 108-497 (498)
120 3k7y_A Aspartate aminotransfer 100.0 1.7E-31 6E-36 236.9 22.7 323 3-352 29-404 (405)
121 4adb_A Succinylornithine trans 100.0 7.8E-31 2.7E-35 234.8 27.3 331 3-356 39-403 (406)
122 2dkj_A Serine hydroxymethyltra 100.0 7.7E-31 2.6E-35 234.9 27.1 329 4-352 24-387 (407)
123 1qgn_A Protein (cystathionine 100.0 4.4E-30 1.5E-34 229.9 31.4 284 37-352 113-444 (445)
124 3nx3_A Acoat, acetylornithine 100.0 1.8E-30 6.2E-35 231.5 28.9 327 3-352 36-394 (395)
125 3fkd_A L-threonine-O-3-phospha 100.0 2.6E-31 8.8E-36 233.2 22.6 312 3-355 15-344 (350)
126 4f4e_A Aromatic-amino-acid ami 100.0 4.1E-31 1.4E-35 237.5 24.3 324 3-350 49-419 (420)
127 2po3_A 4-dehydrase; external a 100.0 3.3E-30 1.1E-34 231.9 29.9 322 7-354 20-387 (424)
128 3ndn_A O-succinylhomoserine su 100.0 4.9E-30 1.7E-34 228.6 30.5 311 8-350 49-413 (414)
129 1sff_A 4-aminobutyrate aminotr 100.0 9.3E-31 3.2E-35 235.8 25.2 334 4-353 42-424 (426)
130 3nyt_A Aminotransferase WBPE; 100.0 1.6E-31 5.6E-36 235.8 19.6 315 4-349 3-360 (367)
131 2fq6_A Cystathionine beta-lyas 100.0 3.7E-30 1.3E-34 229.1 27.9 313 9-348 50-413 (415)
132 2eo5_A 419AA long hypothetical 100.0 2E-30 6.9E-35 232.8 26.3 329 4-353 43-418 (419)
133 1ajs_A Aspartate aminotransfer 100.0 1E-30 3.5E-35 234.5 24.3 327 3-353 30-411 (412)
134 3fsl_A Aromatic-amino-acid ami 100.0 1.2E-30 4E-35 233.0 24.6 326 3-350 26-397 (397)
135 1gc0_A Methionine gamma-lyase; 100.0 2E-29 6.9E-34 224.6 32.1 311 6-349 31-397 (398)
136 1rv3_A Serine hydroxymethyltra 100.0 3.4E-30 1.2E-34 234.6 27.6 328 5-352 46-430 (483)
137 3hbx_A GAD 1, glutamate decarb 100.0 6.2E-30 2.1E-34 233.9 28.9 334 7-355 59-446 (502)
138 2rfv_A Methionine gamma-lyase; 100.0 2E-29 6.9E-34 224.8 31.5 286 36-349 62-396 (398)
139 3vax_A Putative uncharacterize 100.0 5.9E-32 2E-36 241.6 14.7 322 5-352 21-399 (400)
140 4eu1_A Mitochondrial aspartate 100.0 1.5E-30 5E-35 233.2 22.8 323 3-350 41-408 (409)
141 3dxv_A Alpha-amino-epsilon-cap 100.0 3.3E-30 1.1E-34 233.0 25.0 336 3-354 43-426 (439)
142 2cb1_A O-acetyl homoserine sul 100.0 2.4E-29 8.3E-34 225.1 30.4 304 10-348 27-411 (412)
143 1e5e_A MGL, methionine gamma-l 100.0 3.1E-29 1.1E-33 223.5 30.6 285 37-356 61-398 (404)
144 3meb_A Aspartate aminotransfer 100.0 5.3E-30 1.8E-34 231.8 25.8 327 4-354 50-445 (448)
145 7aat_A Aspartate aminotransfer 100.0 3.1E-30 1E-34 230.5 24.0 324 4-350 29-400 (401)
146 3asa_A LL-diaminopimelate amin 100.0 1.2E-30 4.1E-35 233.0 21.2 328 3-355 33-395 (400)
147 2c81_A Glutamine-2-deoxy-scyll 100.0 3.9E-30 1.3E-34 231.0 24.6 315 17-354 15-415 (418)
148 1s0a_A Adenosylmethionine-8-am 100.0 2.1E-29 7E-34 227.1 29.2 336 4-354 44-425 (429)
149 2q7w_A Aspartate aminotransfer 100.0 1.7E-30 5.7E-35 231.9 21.9 325 3-350 26-396 (396)
150 1uu1_A Histidinol-phosphate am 100.0 2.5E-30 8.4E-35 225.5 22.4 301 4-349 20-334 (335)
151 3n0l_A Serine hydroxymethyltra 100.0 3.3E-29 1.1E-33 225.0 30.1 329 5-353 27-389 (417)
152 2a7v_A Serine hydroxymethyltra 100.0 6.1E-30 2.1E-34 230.6 25.2 319 16-353 66-441 (490)
153 3ecd_A Serine hydroxymethyltra 100.0 7.7E-29 2.6E-33 223.2 32.3 329 5-353 34-397 (425)
154 3ri6_A O-acetylhomoserine sulf 100.0 8.3E-30 2.8E-34 227.5 25.6 282 36-350 80-429 (430)
155 3h7f_A Serine hydroxymethyltra 100.0 1.2E-29 4E-34 229.4 26.9 330 5-353 47-414 (447)
156 3k40_A Aromatic-L-amino-acid d 100.0 4.4E-29 1.5E-33 226.7 30.6 312 30-355 101-473 (475)
157 4e1o_A HDC, histidine decarbox 100.0 3.7E-29 1.3E-33 227.8 30.1 312 30-354 106-479 (481)
158 1yaa_A Aspartate aminotransfer 100.0 2.1E-30 7.1E-35 232.4 21.5 326 3-352 29-410 (412)
159 2ay1_A Aroat, aromatic amino a 100.0 1.5E-30 5.2E-35 232.0 19.7 324 3-349 26-392 (394)
160 3vp6_A Glutamate decarboxylase 100.0 8.6E-29 3E-33 226.6 31.0 316 30-354 123-506 (511)
161 3tfu_A Adenosylmethionine-8-am 100.0 7.4E-30 2.5E-34 230.8 23.4 335 4-354 76-454 (457)
162 3gbx_A Serine hydroxymethyltra 100.0 1.4E-29 5E-34 227.6 25.1 319 16-353 42-396 (420)
163 3mad_A Sphingosine-1-phosphate 100.0 3E-29 1E-33 230.8 27.2 317 18-355 114-471 (514)
164 3qhx_A Cystathionine gamma-syn 100.0 1.8E-28 6.2E-33 217.7 30.0 282 36-345 64-390 (392)
165 1o69_A Aminotransferase; struc 100.0 6.3E-29 2.2E-33 221.3 27.1 295 37-352 31-386 (394)
166 1cs1_A CGS, protein (cystathio 100.0 2.6E-28 8.8E-33 216.8 30.7 282 37-349 51-383 (386)
167 3b8x_A WBDK, pyridoxamine 5-ph 100.0 5.5E-29 1.9E-33 221.5 26.1 305 18-346 15-389 (390)
168 2dgk_A GAD-beta, GADB, glutama 100.0 9.1E-29 3.1E-33 224.1 27.9 325 15-355 53-436 (452)
169 2zy4_A L-aspartate beta-decarb 100.0 1.8E-29 6E-34 232.3 23.2 336 5-357 106-526 (546)
170 1js3_A DDC;, DOPA decarboxylas 100.0 1.8E-28 6.2E-33 224.2 29.6 320 18-355 88-476 (486)
171 3acz_A Methionine gamma-lyase; 100.0 4.6E-28 1.6E-32 215.1 31.0 303 11-351 30-387 (389)
172 2qma_A Diaminobutyrate-pyruvat 100.0 2.1E-28 7.1E-33 224.2 28.8 338 3-353 101-496 (497)
173 1qz9_A Kynureninase; kynurenin 100.0 3.5E-29 1.2E-33 224.8 23.0 321 4-354 28-403 (416)
174 3dod_A Adenosylmethionine-8-am 100.0 1.4E-28 4.9E-33 222.6 27.0 339 3-355 44-445 (448)
175 2aeu_A Hypothetical protein MJ 100.0 1.8E-28 6.3E-33 216.4 26.9 317 4-355 29-373 (374)
176 3k28_A Glutamate-1-semialdehyd 100.0 3.3E-29 1.1E-33 225.6 22.5 334 3-353 53-427 (429)
177 3a8u_X Omega-amino acid--pyruv 100.0 9.6E-29 3.3E-33 224.0 25.5 339 4-353 51-447 (449)
178 2okj_A Glutamate decarboxylase 100.0 7.2E-28 2.4E-32 221.0 31.3 313 32-353 122-502 (504)
179 1n8p_A Cystathionine gamma-lya 100.0 4E-28 1.4E-32 215.4 28.6 283 37-349 54-391 (393)
180 3i4j_A Aminotransferase, class 100.0 2.3E-28 7.8E-33 220.3 27.4 338 3-353 29-428 (430)
181 3bb8_A CDP-4-keto-6-deoxy-D-gl 100.0 4.2E-28 1.5E-32 218.8 29.2 310 18-351 43-434 (437)
182 3e9k_A Kynureninase; kynurenin 100.0 8.8E-30 3E-34 231.7 18.3 332 4-354 67-462 (465)
183 3b1d_A Betac-S lyase; HET: PLP 99.9 1.6E-32 5.5E-37 244.5 0.0 329 4-351 32-391 (392)
184 1zod_A DGD, 2,2-dialkylglycine 100.0 2.7E-28 9.2E-33 220.1 27.1 338 4-353 44-432 (433)
185 4ffc_A 4-aminobutyrate aminotr 100.0 3.4E-28 1.1E-32 220.1 27.6 336 3-355 64-451 (453)
186 3mc6_A Sphingosine-1-phosphate 100.0 2E-28 6.8E-33 224.7 26.5 302 34-355 99-439 (497)
187 3a9z_A Selenocysteine lyase; P 100.0 3.8E-29 1.3E-33 225.7 21.2 331 4-355 18-430 (432)
188 3n5m_A Adenosylmethionine-8-am 100.0 3.1E-28 1.1E-32 220.7 27.1 337 3-352 49-451 (452)
189 3i5t_A Aminotransferase; pyrid 100.0 3.2E-28 1.1E-32 221.2 27.1 341 3-357 54-458 (476)
190 1wyu_B Glycine dehydrogenase s 100.0 1.1E-28 3.8E-33 224.5 24.0 324 5-352 68-440 (474)
191 3l44_A Glutamate-1-semialdehyd 100.0 4.1E-28 1.4E-32 218.9 27.5 330 4-355 56-432 (434)
192 3ke3_A Putative serine-pyruvat 100.0 1.4E-28 4.6E-33 217.9 23.8 295 38-354 35-377 (379)
193 2epj_A Glutamate-1-semialdehyd 100.0 4.4E-28 1.5E-32 218.7 27.1 331 4-354 57-432 (434)
194 2cjg_A L-lysine-epsilon aminot 100.0 3.2E-28 1.1E-32 220.1 25.8 331 4-353 55-448 (449)
195 3cog_A Cystathionine gamma-lya 100.0 5E-28 1.7E-32 215.4 26.0 282 37-350 66-399 (403)
196 2jis_A Cysteine sulfinic acid 100.0 3.3E-27 1.1E-31 217.0 32.3 309 33-352 139-514 (515)
197 3gju_A Putative aminotransfera 100.0 1.1E-27 3.9E-32 217.3 28.4 340 3-355 51-458 (460)
198 2c0r_A PSAT, phosphoserine ami 100.0 1E-28 3.6E-33 217.6 21.0 318 1-353 1-361 (362)
199 1pff_A Methionine gamma-lyase; 100.0 4E-28 1.4E-32 211.2 24.1 274 42-349 2-330 (331)
200 2z67_A O-phosphoseryl-tRNA(SEC 100.0 3.3E-28 1.1E-32 220.3 24.4 294 39-350 134-455 (456)
201 1ibj_A CBL, cystathionine beta 100.0 1.8E-28 6.2E-33 221.2 22.4 282 37-352 132-461 (464)
202 3hmu_A Aminotransferase, class 100.0 4.2E-28 1.4E-32 220.1 24.7 337 3-354 55-453 (472)
203 1w23_A Phosphoserine aminotran 100.0 4.3E-29 1.5E-33 219.9 17.8 317 3-352 2-359 (360)
204 4h51_A Aspartate aminotransfer 100.0 2.5E-28 8.4E-33 216.6 22.6 327 5-356 46-420 (420)
205 3oks_A 4-aminobutyrate transam 100.0 3.7E-28 1.3E-32 219.8 24.1 337 3-352 61-450 (451)
206 4a6r_A Omega transaminase; tra 100.0 2.6E-27 8.8E-32 214.9 29.6 338 3-355 50-451 (459)
207 3nmy_A Xometc, cystathionine g 100.0 4.9E-27 1.7E-31 208.3 28.3 282 37-351 66-397 (400)
208 2ctz_A O-acetyl-L-homoserine s 100.0 3.7E-27 1.3E-31 211.3 26.3 308 9-350 27-420 (421)
209 2fyf_A PSAT, phosphoserine ami 100.0 2.7E-27 9.4E-32 211.1 24.9 315 4-352 40-397 (398)
210 3jzl_A Putative cystathionine 100.0 4.1E-27 1.4E-31 208.4 25.7 277 17-316 31-340 (409)
211 2cy8_A D-phgat, D-phenylglycin 100.0 1.2E-26 4.1E-31 210.4 28.4 329 4-355 58-437 (453)
212 1c4k_A Protein (ornithine deca 100.0 2.6E-27 9E-32 222.5 24.2 313 33-354 168-567 (730)
213 3i16_A Aluminum resistance pro 100.0 3.2E-26 1.1E-30 203.3 29.5 279 17-316 45-357 (427)
214 3bwn_A AT1G70560, L-tryptophan 100.0 1.7E-27 5.9E-32 211.5 21.0 309 4-353 23-387 (391)
215 4e77_A Glutamate-1-semialdehyd 100.0 5.8E-27 2E-31 211.0 24.7 331 3-352 53-428 (429)
216 2e7u_A Glutamate-1-semialdehyd 100.0 7.5E-27 2.6E-31 210.0 25.4 324 4-350 53-424 (424)
217 3fq8_A Glutamate-1-semialdehyd 100.0 1.3E-26 4.4E-31 208.7 25.9 328 4-352 53-426 (427)
218 3ht4_A Aluminum resistance pro 100.0 7.9E-27 2.7E-31 208.4 24.1 279 17-315 37-345 (431)
219 3hvy_A Cystathionine beta-lyas 100.0 5.4E-26 1.9E-30 201.8 28.5 278 16-315 45-356 (427)
220 2x3l_A ORN/Lys/Arg decarboxyla 99.9 2.1E-27 7.1E-32 214.1 15.9 292 33-353 52-353 (446)
221 2hox_A ALLIIN lyase 1; cystein 99.9 1.1E-26 3.6E-31 208.4 20.0 307 4-352 57-424 (427)
222 1wyu_A Glycine dehydrogenase ( 99.9 5.7E-26 2E-30 204.9 22.8 284 39-350 109-437 (438)
223 1ohv_A 4-aminobutyrate aminotr 99.9 1.4E-25 4.7E-30 203.7 24.5 330 3-353 63-471 (472)
224 4ao9_A Beta-phenylalanine amin 99.9 2.1E-24 7.1E-29 192.1 28.7 334 3-356 87-449 (454)
225 3qm2_A Phosphoserine aminotran 99.9 2.9E-25 9.9E-30 194.7 21.1 319 3-352 25-384 (386)
226 3ou5_A Serine hydroxymethyltra 99.9 4.8E-24 1.6E-28 184.0 28.1 316 17-351 67-439 (490)
227 2vyc_A Biodegradative arginine 99.9 3E-25 1E-29 210.5 22.7 308 35-354 202-606 (755)
228 3e77_A Phosphoserine aminotran 99.9 1.5E-25 5.3E-30 195.3 18.7 315 11-352 19-374 (377)
229 3m5u_A Phosphoserine aminotran 99.9 2.2E-24 7.5E-29 187.4 23.3 315 3-352 4-359 (361)
230 3n75_A LDC, lysine decarboxyla 99.9 8.4E-25 2.9E-29 203.8 21.2 307 32-353 189-560 (715)
231 2yky_A Beta-transaminase; tran 99.9 7.9E-28 2.7E-32 215.7 0.0 331 3-354 100-461 (465)
232 3bc8_A O-phosphoseryl-tRNA(SEC 99.9 3.3E-23 1.1E-27 182.4 27.0 307 39-358 99-448 (450)
233 3hl2_A O-phosphoseryl-tRNA(SEC 99.9 1.3E-22 4.3E-27 176.0 26.4 294 50-357 128-465 (501)
234 4atq_A 4-aminobutyrate transam 99.9 3.7E-23 1.3E-27 185.0 23.8 341 4-353 65-455 (456)
235 4e3q_A Pyruvate transaminase; 99.9 3.5E-22 1.2E-26 179.3 29.6 340 3-356 67-471 (473)
236 4a0g_A Adenosylmethionine-8-am 99.9 5.9E-22 2E-26 189.3 19.4 339 4-353 381-828 (831)
237 4gqr_A Pancreatic alpha-amylas 76.2 4.4 0.00015 36.3 6.1 24 155-178 75-98 (496)
238 3e2i_A Thymidine kinase; Zn-bi 70.1 15 0.0005 28.8 6.8 95 63-178 42-136 (219)
239 3s5o_A 4-hydroxy-2-oxoglutarat 68.1 9.4 0.00032 31.8 5.8 70 100-175 15-88 (307)
240 1xky_A Dihydrodipicolinate syn 65.7 7.7 0.00026 32.2 4.8 73 98-176 11-87 (301)
241 1g94_A Alpha-amylase; beta-alp 65.2 6.9 0.00024 34.6 4.7 43 136-178 28-86 (448)
242 3l21_A DHDPS, dihydrodipicolin 63.7 9 0.00031 31.9 4.8 71 100-176 16-90 (304)
243 2wkj_A N-acetylneuraminate lya 63.6 11 0.00038 31.3 5.4 72 99-176 11-86 (303)
244 1uta_A FTSN, MSGA, cell divisi 62.7 16 0.00055 23.2 5.0 47 302-348 21-68 (81)
245 3dz1_A Dihydrodipicolinate syn 60.4 9.6 0.00033 31.9 4.4 61 109-175 19-81 (313)
246 3fkr_A L-2-keto-3-deoxyarabona 60.0 7.7 0.00026 32.4 3.8 71 100-176 9-83 (309)
247 3flu_A DHDPS, dihydrodipicolin 59.7 10 0.00034 31.5 4.4 61 109-175 18-81 (297)
248 1jae_A Alpha-amylase; glycosid 59.0 12 0.00042 33.3 5.2 58 117-178 20-96 (471)
249 3cpr_A Dihydrodipicolinate syn 58.3 12 0.00042 31.1 4.7 62 109-176 27-91 (304)
250 4b79_A PA4098, probable short- 56.7 46 0.0016 26.5 7.6 64 56-128 13-76 (242)
251 3e96_A Dihydrodipicolinate syn 56.3 10 0.00034 31.8 3.9 71 100-176 12-87 (316)
252 2j9r_A Thymidine kinase; TK1, 55.3 39 0.0013 26.3 6.8 126 63-210 42-168 (214)
253 3qze_A DHDPS, dihydrodipicolin 55.2 9.5 0.00033 31.9 3.6 61 109-175 34-97 (314)
254 3v7e_A Ribosome-associated pro 55.2 38 0.0013 21.6 5.9 45 118-177 16-60 (82)
255 3na8_A Putative dihydrodipicol 54.6 8.3 0.00028 32.3 3.1 61 109-175 35-98 (315)
256 4dpp_A DHDPS 2, dihydrodipicol 54.6 16 0.00056 31.1 4.9 71 100-176 60-134 (360)
257 3bzy_B ESCU; auto cleavage pro 54.3 8.3 0.00028 24.9 2.3 20 159-178 29-48 (83)
258 2v9d_A YAGE; dihydrodipicolini 53.5 13 0.00046 31.4 4.2 70 101-176 33-106 (343)
259 3tak_A DHDPS, dihydrodipicolin 53.1 11 0.00039 31.0 3.7 61 109-175 12-75 (291)
260 3h5d_A DHDPS, dihydrodipicolin 52.6 11 0.00038 31.5 3.5 71 100-176 8-82 (311)
261 2ojp_A DHDPS, dihydrodipicolin 52.1 12 0.00042 30.9 3.7 62 109-176 12-76 (292)
262 2r8w_A AGR_C_1641P; APC7498, d 52.0 13 0.00043 31.4 3.8 62 109-176 45-109 (332)
263 3si9_A DHDPS, dihydrodipicolin 51.8 11 0.00036 31.7 3.3 61 109-175 33-96 (315)
264 2o1e_A YCDH; alpha-beta protei 51.0 35 0.0012 28.4 6.4 77 77-174 189-266 (312)
265 1f6k_A N-acetylneuraminate lya 50.8 18 0.00061 29.9 4.5 63 109-176 14-79 (293)
266 1x60_A Sporulation-specific N- 50.7 25 0.00086 22.0 4.3 46 302-348 21-68 (79)
267 3b4u_A Dihydrodipicolinate syn 50.4 16 0.00053 30.2 4.1 62 109-176 14-78 (294)
268 1xx6_A Thymidine kinase; NESG, 49.2 76 0.0026 24.1 7.6 94 63-177 22-115 (191)
269 2hmc_A AGR_L_411P, dihydrodipi 48.9 14 0.00049 31.3 3.7 62 109-176 37-98 (344)
270 1h1y_A D-ribulose-5-phosphate 47.3 76 0.0026 24.8 7.6 42 136-177 138-180 (228)
271 3t7y_A YOP proteins translocat 47.2 12 0.00039 25.0 2.2 20 159-178 44-63 (97)
272 2vt1_B Surface presentation of 47.2 12 0.00042 24.7 2.3 20 159-178 29-48 (93)
273 3a5f_A Dihydrodipicolinate syn 46.7 18 0.00061 29.8 3.9 61 109-176 13-76 (291)
274 3mfq_A TROA, high-affinity zin 46.6 12 0.0004 30.8 2.8 66 98-175 177-243 (282)
275 3d0c_A Dihydrodipicolinate syn 46.2 15 0.00051 30.7 3.4 71 100-176 12-87 (314)
276 1vli_A Spore coat polysacchari 46.2 68 0.0023 27.5 7.4 105 117-230 169-276 (385)
277 4hpn_A Putative uncharacterize 45.6 22 0.00074 30.6 4.4 81 110-210 193-275 (378)
278 3c01_E Surface presentation of 45.3 13 0.00044 24.8 2.2 20 159-178 29-48 (98)
279 3qfe_A Putative dihydrodipicol 45.1 15 0.00052 30.7 3.2 62 109-176 21-86 (318)
280 3m5v_A DHDPS, dihydrodipicolin 44.9 13 0.00043 30.9 2.7 61 109-176 19-83 (301)
281 3ijl_A Muconate cycloisomerase 44.5 23 0.00078 29.9 4.3 84 107-210 175-259 (338)
282 3m05_A Uncharacterized protein 44.4 43 0.0015 23.0 4.8 48 302-351 16-70 (114)
283 2pcq_A Putative dihydrodipicol 44.2 6.8 0.00023 32.2 0.9 60 109-176 9-68 (283)
284 1hjs_A Beta-1,4-galactanase; 4 43.9 26 0.0009 29.5 4.6 32 146-177 49-80 (332)
285 2ehh_A DHDPS, dihydrodipicolin 43.4 20 0.00068 29.6 3.7 61 109-176 12-75 (294)
286 3eb2_A Putative dihydrodipicol 42.7 8.6 0.00029 31.9 1.3 61 109-175 15-78 (300)
287 2xw6_A MGS, methylglyoxal synt 42.3 41 0.0014 23.9 4.6 48 120-177 65-112 (134)
288 3gi1_A LBP, laminin-binding pr 42.2 31 0.0011 28.3 4.6 78 77-175 178-256 (286)
289 3e48_A Putative nucleoside-dip 42.1 1.2E+02 0.0039 24.4 8.3 55 101-171 44-98 (289)
290 2wqp_A Polysialic acid capsule 41.8 72 0.0025 27.0 6.8 102 117-229 159-263 (349)
291 1o5k_A DHDPS, dihydrodipicolin 41.5 15 0.0005 30.6 2.6 61 109-176 24-87 (306)
292 2gjh_A Designed protein; oblig 41.4 46 0.0016 18.5 4.1 29 325-354 3-31 (62)
293 1w3i_A EDA, 2-keto-3-deoxy glu 40.8 22 0.00076 29.3 3.6 55 109-169 10-64 (293)
294 3on1_A BH2414 protein; structu 40.1 68 0.0023 21.3 5.4 43 118-175 23-65 (101)
295 3jva_A Dipeptide epimerase; en 40.1 61 0.0021 27.4 6.3 80 111-210 189-270 (354)
296 1b93_A Protein (methylglyoxal 40.0 59 0.002 23.7 5.2 47 120-177 73-120 (152)
297 3r3h_A O-methyltransferase, SA 40.0 1.3E+02 0.0043 23.7 7.9 51 36-87 44-94 (242)
298 2nuw_A 2-keto-3-deoxygluconate 39.4 20 0.00069 29.5 3.1 55 109-169 10-64 (288)
299 3dr5_A Putative O-methyltransf 39.3 1.3E+02 0.0045 23.2 8.6 123 36-179 37-165 (221)
300 3kts_A Glycerol uptake operon 39.2 57 0.0019 24.9 5.3 42 117-175 18-59 (192)
301 2ab1_A Hypothetical protein; H 38.9 89 0.0031 21.7 5.9 49 115-178 48-97 (122)
302 3v7q_A Probable ribosomal prot 38.8 78 0.0027 21.0 5.5 44 118-176 24-67 (101)
303 3mio_A DHBP synthase, 3,4-dihy 38.8 72 0.0025 24.6 5.8 38 135-175 157-194 (206)
304 2yxg_A DHDPS, dihydrodipicolin 38.5 20 0.00068 29.5 2.9 61 109-176 12-75 (289)
305 3j21_Z 50S ribosomal protein L 38.4 59 0.002 21.5 4.8 43 118-175 20-62 (99)
306 3cpq_A 50S ribosomal protein L 38.3 71 0.0024 21.6 5.3 42 118-174 26-67 (110)
307 1tks_A 3,4-dihydroxy-2-butanon 38.0 61 0.0021 24.9 5.2 37 135-175 158-194 (204)
308 1nxi_A Conserved hypothetical 38.0 1E+02 0.0036 21.7 7.1 62 292-355 43-113 (132)
309 3tj4_A Mandelate racemase; eno 37.9 58 0.002 27.8 5.9 80 111-210 203-284 (372)
310 1vhx_A Putative holliday junct 37.2 87 0.003 22.7 5.9 57 114-178 40-99 (150)
311 2yl6_A Beta-N-acetylhexosamini 36.9 21 0.00071 31.4 2.9 28 149-176 84-111 (434)
312 2yl5_A Beta-N-acetylhexosamini 36.9 22 0.00075 31.4 3.1 28 149-176 87-114 (442)
313 1qys_A TOP7; alpha-beta, novel 36.3 72 0.0025 19.8 4.4 32 322-354 44-75 (106)
314 4ggi_A UDP-2,3-diacylglucosami 35.9 83 0.0028 25.7 6.2 48 111-174 222-275 (283)
315 1yht_A DSPB; beta barrel, hydr 35.6 30 0.001 29.6 3.6 26 151-176 89-114 (367)
316 2qlc_A DNA repair protein RADC 35.5 81 0.0028 22.1 5.3 44 119-172 58-105 (126)
317 3cyj_A Mandelate racemase/muco 35.2 41 0.0014 28.8 4.5 79 110-208 193-274 (372)
318 1vmd_A MGS, methylglyoxal synt 35.0 66 0.0023 24.1 4.9 48 120-177 89-136 (178)
319 1lwj_A 4-alpha-glucanotransfer 34.5 27 0.00091 30.7 3.3 23 156-178 69-91 (441)
320 3pzt_A Endoglucanase; alpha/be 34.4 25 0.00087 29.4 3.0 23 156-178 104-126 (327)
321 2dvt_A Thermophilic reversible 34.4 71 0.0024 26.3 5.9 52 118-177 110-165 (327)
322 1pq4_A Periplasmic binding pro 33.7 82 0.0028 25.8 5.9 77 77-175 189-265 (291)
323 3bh4_A Alpha-amylase; calcium, 33.7 28 0.00095 31.1 3.3 23 156-178 78-100 (483)
324 3r0u_A Enzyme of enolase super 33.7 48 0.0017 28.5 4.7 81 110-210 191-275 (379)
325 1ud2_A Amylase, alpha-amylase; 33.6 28 0.00095 31.0 3.3 23 156-178 80-102 (480)
326 4h1z_A Enolase Q92ZS5; dehydra 33.6 57 0.002 28.4 5.2 54 111-178 238-291 (412)
327 1w41_A 50S ribosomal protein L 33.5 73 0.0025 21.1 4.7 43 118-175 21-63 (101)
328 1ht6_A AMY1, alpha-amylase iso 33.5 29 0.00099 30.1 3.3 23 156-178 68-90 (405)
329 1mxg_A Alpha amylase; hyperthe 33.4 29 0.00098 30.5 3.3 23 156-178 86-108 (435)
330 1wpc_A Glucan 1,4-alpha-maltoh 33.3 28 0.00097 31.0 3.3 23 156-178 82-104 (485)
331 1hvx_A Alpha-amylase; hydrolas 33.2 28 0.00097 31.3 3.3 23 156-178 81-103 (515)
332 3b1s_B Flagellar biosynthetic 39.3 9.1 0.00031 24.9 0.0 20 159-178 29-48 (87)
333 1rlg_A 50S ribosomal protein L 32.7 86 0.0029 21.6 5.1 45 118-176 32-76 (119)
334 3tsm_A IGPS, indole-3-glycerol 32.3 96 0.0033 25.2 5.9 50 113-177 127-176 (272)
335 2him_A L-asparaginase 1; hydro 32.2 99 0.0034 26.3 6.3 49 115-175 240-289 (358)
336 2ozt_A TLR1174 protein; struct 32.2 38 0.0013 28.4 3.8 78 111-208 167-249 (332)
337 3u5e_c L32, RP73, YL38, 60S ri 32.1 1E+02 0.0035 20.6 5.2 43 117-174 26-68 (105)
338 3fcp_A L-Ala-D/L-Glu epimerase 32.0 32 0.0011 29.6 3.3 48 157-210 231-280 (381)
339 3i4k_A Muconate lactonizing en 31.8 59 0.002 27.9 5.0 48 157-210 232-281 (383)
340 2wm1_A 2-amino-3-carboxymucona 31.5 89 0.003 26.0 6.0 50 118-177 126-175 (336)
341 3nvt_A 3-deoxy-D-arabino-heptu 31.5 96 0.0033 26.7 6.1 109 116-230 260-374 (385)
342 2jli_A YSCU, YOP proteins tran 31.3 28 0.00096 24.3 2.2 20 159-178 73-92 (123)
343 2b8t_A Thymidine kinase; deoxy 31.3 1.9E+02 0.0063 22.6 9.5 99 63-178 26-124 (223)
344 2guy_A Alpha-amylase A; (beta- 31.3 32 0.0011 30.6 3.3 23 156-178 97-119 (478)
345 7a3h_A Endoglucanase; hydrolas 31.1 31 0.0011 28.4 3.0 23 156-178 79-101 (303)
346 3ovp_A Ribulose-phosphate 3-ep 31.0 1.7E+02 0.0057 22.9 7.0 72 117-204 124-197 (228)
347 2f6k_A Metal-dependent hydrola 30.8 87 0.003 25.5 5.8 51 117-177 105-155 (307)
348 1wza_A Alpha-amylase A; hydrol 30.7 33 0.0011 30.6 3.3 62 117-178 25-103 (488)
349 2z1k_A (NEO)pullulanase; hydro 30.4 34 0.0012 30.4 3.3 58 117-178 48-118 (475)
350 1gcy_A Glucan 1,4-alpha-maltot 30.3 34 0.0012 30.9 3.3 23 156-178 92-114 (527)
351 2prs_A High-affinity zinc upta 29.9 39 0.0013 27.6 3.3 77 77-174 173-250 (284)
352 3bzs_A ESCU; auto cleavage pro 29.9 30 0.001 24.7 2.2 20 159-178 83-102 (137)
353 3dhu_A Alpha-amylase; structur 29.8 35 0.0012 30.0 3.3 23 156-178 83-105 (449)
354 3dip_A Enolase; structural gen 29.7 86 0.0029 27.2 5.6 80 111-210 219-301 (410)
355 3vup_A Beta-1,4-mannanase; TIM 29.6 35 0.0012 28.2 3.1 22 157-178 90-111 (351)
356 1wuf_A Hypothetical protein LI 29.5 55 0.0019 28.2 4.4 81 109-210 206-288 (393)
357 3dg3_A Muconate cycloisomerase 29.5 51 0.0017 28.1 4.1 80 111-211 191-272 (367)
358 2whl_A Beta-mannanase, baman5; 29.4 34 0.0012 28.0 3.0 23 156-178 63-85 (294)
359 4aie_A Glucan 1,6-alpha-glucos 29.4 35 0.0012 30.8 3.3 44 136-179 45-102 (549)
360 3daq_A DHDPS, dihydrodipicolin 29.3 30 0.001 28.5 2.6 61 109-176 14-77 (292)
361 2aif_A Ribosomal protein L7A; 29.3 1E+02 0.0035 21.8 5.0 45 117-175 45-89 (135)
362 3ged_A Short-chain dehydrogena 29.3 69 0.0024 25.5 4.6 33 55-87 3-35 (247)
363 2rfg_A Dihydrodipicolinate syn 29.2 21 0.00071 29.6 1.5 61 109-176 12-75 (297)
364 3ff4_A Uncharacterized protein 29.1 60 0.002 22.6 3.7 32 135-178 81-112 (122)
365 1tvn_A Cellulase, endoglucanas 29.1 37 0.0013 27.7 3.1 22 157-178 79-100 (293)
366 3p8k_A Hydrolase, carbon-nitro 29.0 81 0.0028 25.6 5.1 54 117-176 38-101 (281)
367 3jug_A Beta-mannanase; TIM-bar 28.9 34 0.0012 29.0 2.9 23 156-178 86-108 (345)
368 3rcn_A Beta-N-acetylhexosamini 28.8 35 0.0012 31.0 3.1 27 150-176 217-243 (543)
369 2dh2_A 4F2 cell-surface antige 28.6 39 0.0013 29.5 3.3 24 156-179 81-104 (424)
370 1chr_A Chloromuconate cycloiso 28.5 73 0.0025 27.2 4.9 58 139-210 216-275 (370)
371 3irs_A Uncharacterized protein 28.2 73 0.0025 26.0 4.8 51 118-177 108-158 (291)
372 1bqc_A Protein (beta-mannanase 28.2 39 0.0013 27.7 3.1 24 155-178 63-86 (302)
373 2aaa_A Alpha-amylase; glycosid 28.2 35 0.0012 30.4 3.0 23 156-178 97-119 (484)
374 1ua7_A Alpha-amylase; beta-alp 28.1 31 0.0011 30.1 2.6 23 156-178 74-96 (422)
375 2fv7_A Ribokinase; structural 28.0 2.1E+02 0.0071 23.6 7.7 23 156-178 166-188 (331)
376 3ij6_A Uncharacterized metal-d 27.9 1.1E+02 0.0037 25.3 5.8 50 118-177 113-162 (312)
377 2jlj_A YSCU, YOP proteins tran 27.8 34 0.0012 24.7 2.2 20 159-178 82-101 (144)
378 3nl6_A Thiamine biosynthetic b 27.6 80 0.0027 28.6 5.2 49 118-177 28-76 (540)
379 1agx_A Glutaminase-asparaginas 27.5 1.1E+02 0.0038 25.7 5.7 47 116-174 227-273 (331)
380 1k7c_A Rhamnogalacturonan acet 27.4 78 0.0027 24.7 4.7 53 117-177 113-169 (233)
381 3ivz_A Nitrilase; alpha-beta s 27.4 97 0.0033 24.7 5.3 40 135-176 33-86 (262)
382 3hh8_A Metal ABC transporter s 27.3 51 0.0017 27.1 3.6 75 79-174 184-259 (294)
383 3q45_A Mandelate racemase/muco 27.1 60 0.002 27.7 4.1 48 157-210 222-271 (368)
384 1egz_A Endoglucanase Z, EGZ, C 27.0 42 0.0014 27.3 3.1 23 156-178 76-98 (291)
385 1g01_A Endoglucanase; alpha/be 26.9 42 0.0014 28.6 3.1 23 157-179 90-112 (364)
386 2fc3_A 50S ribosomal protein L 26.8 94 0.0032 21.6 4.4 45 118-176 33-77 (124)
387 4hty_A Cellulase; (alpha/beta) 26.8 42 0.0014 28.5 3.1 23 156-178 120-142 (359)
388 3cx3_A Lipoprotein; zinc-bindi 26.8 39 0.0013 27.6 2.8 74 77-174 176-253 (284)
389 3toy_A Mandelate racemase/muco 26.8 51 0.0018 28.3 3.7 80 111-210 219-300 (383)
390 1vs1_A 3-deoxy-7-phosphoheptul 26.7 68 0.0023 26.1 4.1 90 117-210 157-252 (276)
391 4g81_D Putative hexonate dehyd 26.7 1E+02 0.0035 24.6 5.2 69 56-127 11-79 (255)
392 3nur_A Amidohydrolase; TIM bar 26.6 1E+02 0.0035 26.1 5.5 51 117-177 143-193 (357)
393 3i6i_A Putative leucoanthocyan 26.5 1.6E+02 0.0056 24.3 6.9 56 101-175 60-116 (346)
394 2r91_A 2-keto-3-deoxy-(6-phosp 26.5 33 0.0011 28.1 2.3 54 109-169 10-63 (286)
395 3n9k_A Glucan 1,3-beta-glucosi 26.3 43 0.0015 29.0 3.1 23 156-178 112-134 (399)
396 3iz5_f 60S ribosomal protein L 26.3 1.3E+02 0.0046 20.4 5.0 44 118-176 31-74 (112)
397 2wc7_A Alpha amylase, catalyti 26.3 41 0.0014 30.0 3.1 23 156-178 102-124 (488)
398 3rjz_A N-type ATP pyrophosphat 26.3 2.4E+02 0.0082 22.2 7.7 104 55-175 7-121 (237)
399 1m53_A Isomaltulose synthase; 26.2 44 0.0015 30.6 3.3 58 117-178 43-114 (570)
400 4hnl_A Mandelate racemase/muco 26.1 55 0.0019 28.5 3.8 81 110-210 226-308 (421)
401 1xvl_A Mn transporter, MNTC pr 26.1 81 0.0028 26.3 4.7 76 78-174 204-280 (321)
402 1tqj_A Ribulose-phosphate 3-ep 26.0 1.1E+02 0.0038 23.9 5.2 42 136-177 134-180 (230)
403 3fxd_A Protein ICMQ; helix bun 26.0 79 0.0027 18.4 3.0 20 333-352 4-23 (57)
404 3tji_A Mandelate racemase/muco 26.0 77 0.0026 27.7 4.7 81 110-210 227-309 (422)
405 2ioj_A Hypothetical protein AF 25.9 79 0.0027 22.3 4.0 33 135-177 73-105 (139)
406 2vc6_A MOSA, dihydrodipicolina 25.9 23 0.00078 29.2 1.2 61 109-176 12-75 (292)
407 3tha_A Tryptophan synthase alp 25.9 1.5E+02 0.0053 23.6 6.0 85 79-175 118-204 (252)
408 2yxb_A Coenzyme B12-dependent 25.9 84 0.0029 23.0 4.3 63 98-177 42-107 (161)
409 3rst_A Signal peptide peptidas 25.7 2.4E+02 0.0083 22.1 8.3 98 116-226 29-130 (240)
410 4a18_G RPL30; ribosome, eukary 25.6 1.2E+02 0.004 20.2 4.6 43 118-175 27-69 (104)
411 1uok_A Oligo-1,6-glucosidase; 25.6 46 0.0016 30.3 3.3 23 156-178 78-100 (558)
412 1zja_A Trehalulose synthase; s 25.5 46 0.0016 30.3 3.3 58 117-178 30-101 (557)
413 3t6c_A RSPA, putative MAND fam 25.5 73 0.0025 28.0 4.5 81 110-210 245-327 (440)
414 4go7_X Aspartokinase; transfer 25.5 38 0.0013 26.1 2.3 47 303-351 131-177 (200)
415 2ze0_A Alpha-glucosidase; TIM 25.4 46 0.0016 30.3 3.3 58 117-178 29-100 (555)
416 4fgs_A Probable dehydrogenase 25.3 88 0.003 25.4 4.6 66 56-127 31-96 (273)
417 4inf_A Metal-dependent hydrola 25.3 1E+02 0.0034 26.4 5.2 50 118-177 162-211 (373)
418 3edf_A FSPCMD, cyclomaltodextr 25.2 47 0.0016 30.6 3.3 58 117-178 146-220 (601)
419 1qnr_A Endo-1,4-B-D-mannanase; 25.1 45 0.0015 27.9 3.0 23 156-178 89-111 (344)
420 3bc9_A AMYB, alpha amylase, ca 25.1 47 0.0016 30.6 3.3 23 156-178 208-230 (599)
421 3dqp_A Oxidoreductase YLBE; al 25.1 2.2E+02 0.0076 21.5 8.7 59 57-126 3-62 (219)
422 1cyg_A Cyclodextrin glucanotra 25.0 47 0.0016 31.2 3.3 58 117-178 50-133 (680)
423 3mqt_A Mandelate racemase/muco 24.9 1.1E+02 0.0039 26.3 5.5 80 111-210 206-288 (394)
424 1xbi_A 50S ribosomal protein L 24.9 77 0.0026 21.9 3.6 45 118-176 34-78 (120)
425 1d3c_A Cyclodextrin glycosyltr 24.7 47 0.0016 31.2 3.3 58 117-178 53-137 (686)
426 2cks_A Endoglucanase E-5; carb 24.7 44 0.0015 27.5 2.8 22 157-178 80-101 (306)
427 1qho_A Alpha-amylase; glycosid 24.7 48 0.0016 31.2 3.3 23 156-178 107-129 (686)
428 1fob_A Beta-1,4-galactanase; B 24.6 61 0.0021 27.2 3.7 32 147-178 50-81 (334)
429 3dgb_A Muconate cycloisomerase 24.6 46 0.0016 28.6 2.9 48 157-210 232-281 (382)
430 4e8g_A Enolase, mandelate race 24.6 1E+02 0.0035 26.6 5.1 79 109-210 214-294 (391)
431 1g57_A DHBP synthase, 3,4-dihy 24.4 1.6E+02 0.0056 22.9 5.6 36 135-175 166-201 (217)
432 1snn_A DHBP synthase, 3,4-dihy 24.4 1.5E+02 0.0051 23.2 5.5 36 135-175 177-212 (227)
433 3ikh_A Carbohydrate kinase; tr 24.4 2.8E+02 0.0096 22.4 10.9 50 115-178 116-165 (299)
434 3rd5_A Mypaa.01249.C; ssgcid, 24.4 2.3E+02 0.008 22.7 7.2 66 56-127 18-83 (291)
435 3o85_A Ribosomal protein L7AE; 24.3 1.1E+02 0.0036 21.3 4.3 45 118-176 36-80 (122)
436 2gjx_A Beta-hexosaminidase alp 24.3 52 0.0018 29.6 3.3 26 151-176 209-234 (507)
437 2al1_A Enolase 1, 2-phospho-D- 24.2 2E+02 0.0069 25.2 7.0 85 77-176 288-372 (436)
438 3bmv_A Cyclomaltodextrin gluca 24.1 50 0.0017 31.0 3.3 58 117-178 53-138 (683)
439 4aef_A Neopullulanase (alpha-a 24.0 50 0.0017 30.7 3.3 59 117-179 237-308 (645)
440 3sjn_A Mandelate racemase/muco 24.0 96 0.0033 26.5 4.9 79 112-210 200-281 (374)
441 1h4p_A Glucan 1,3-beta-glucosi 23.9 50 0.0017 28.7 3.1 24 156-179 113-136 (408)
442 2zic_A Dextran glucosidase; TI 23.9 46 0.0016 30.2 3.0 58 117-178 29-100 (543)
443 2gwg_A 4-oxalomesaconate hydra 23.8 1.4E+02 0.0049 24.9 5.9 53 117-177 124-179 (350)
444 3aj7_A Oligo-1,6-glucosidase; 23.7 52 0.0018 30.3 3.3 58 117-178 38-109 (589)
445 3b0z_B Flagellar biosynthetic 29.4 17 0.00058 25.1 0.0 20 159-178 29-48 (114)
446 2yv1_A Succinyl-COA ligase [AD 23.6 3E+02 0.01 22.4 9.4 46 118-178 84-129 (294)
447 2r2a_A Uncharacterized protein 23.6 22 0.00074 27.4 0.6 16 166-181 84-99 (199)
448 2lbw_A H/ACA ribonucleoprotein 23.5 1.2E+02 0.0042 20.9 4.5 45 118-176 25-69 (121)
449 4dxk_A Mandelate racemase / mu 23.5 91 0.0031 26.9 4.6 80 111-210 216-297 (400)
450 2poz_A Putative dehydratase; o 23.4 1.3E+02 0.0043 25.9 5.6 80 111-210 205-286 (392)
451 3qr3_A Endoglucanase EG-II; TI 23.4 56 0.0019 27.6 3.2 24 156-179 83-106 (340)
452 1tkk_A Similar to chloromucona 23.2 93 0.0032 26.4 4.6 80 111-210 191-274 (366)
453 1j0h_A Neopullulanase; beta-al 23.1 54 0.0018 30.1 3.3 59 117-179 174-245 (588)
454 4e5t_A Mandelate racemase / mu 23.1 1E+02 0.0036 26.6 5.0 81 110-210 213-295 (404)
455 1h1n_A Endo type cellulase ENG 23.1 57 0.0019 26.8 3.2 23 157-179 72-94 (305)
456 3ry7_A Ribokinase; transferase 23.0 1.4E+02 0.0048 24.2 5.6 23 156-178 145-167 (304)
457 2ale_A SNU13, NHP2/L7AE family 22.8 1.6E+02 0.0055 20.8 5.0 45 118-176 37-81 (134)
458 4pga_A Glutaminase-asparaginas 22.6 1.5E+02 0.005 25.0 5.5 47 116-175 233-279 (337)
459 3ry0_A Putative tautomerase; o 22.5 1.3E+02 0.0043 17.7 4.5 30 325-354 2-31 (65)
460 2hbv_A 2-amino-3-carboxymucona 22.4 1E+02 0.0035 25.6 4.7 49 118-177 130-178 (334)
461 2opj_A O-succinylbenzoate-COA 22.4 94 0.0032 26.0 4.4 81 108-210 127-209 (327)
462 1i4n_A Indole-3-glycerol phosp 22.3 1.9E+02 0.0064 23.1 5.9 50 113-177 108-157 (251)
463 1wzl_A Alpha-amylase II; pullu 22.3 52 0.0018 30.2 3.0 59 117-179 171-242 (585)
464 1ceo_A Cellulase CELC; glycosy 22.2 58 0.002 27.2 3.1 24 156-179 68-91 (343)
465 2chr_A Chloromuconate cycloiso 22.0 55 0.0019 27.9 3.0 80 111-210 194-275 (370)
466 4aee_A Alpha amylase, catalyti 21.8 59 0.002 30.6 3.3 58 117-178 263-333 (696)
467 1jak_A Beta-N-acetylhexosamini 21.7 67 0.0023 28.9 3.5 26 151-176 225-250 (512)
468 2gl5_A Putative dehydratase pr 21.5 1.3E+02 0.0044 26.0 5.3 78 111-208 224-303 (410)
469 1o7j_A L-asparaginase; atomic 21.4 1.8E+02 0.0061 24.3 5.8 46 116-174 229-274 (327)
470 1r0m_A N-acylamino acid racema 21.4 1E+02 0.0035 26.2 4.6 77 113-210 197-275 (375)
471 2frh_A SARA, staphylococcal ac 21.4 1.9E+02 0.0065 19.7 5.3 54 303-357 69-125 (127)
472 2wm3_A NMRA-like family domain 21.4 1.4E+02 0.0048 24.0 5.3 98 56-171 7-107 (299)
473 3qja_A IGPS, indole-3-glycerol 21.3 2.4E+02 0.0082 22.8 6.5 50 113-177 120-169 (272)
474 3czg_A Sucrose hydrolase; (alp 21.3 62 0.0021 30.2 3.3 58 117-178 104-177 (644)
475 2c0h_A Mannan endo-1,4-beta-ma 21.3 62 0.0021 27.1 3.1 21 157-177 91-111 (353)
476 2q5c_A NTRC family transcripti 21.3 2.7E+02 0.0092 21.0 10.5 65 38-110 14-78 (196)
477 1g5a_A Amylosucrase; glycosylt 21.2 62 0.0021 30.0 3.3 43 136-178 126-184 (628)
478 4e4u_A Mandalate racemase/muco 21.2 93 0.0032 27.0 4.2 81 110-210 206-288 (412)
479 3o63_A Probable thiamine-phosp 21.0 71 0.0024 25.4 3.2 50 118-177 46-103 (243)
480 3vc3_A Beta-cyanoalnine syntha 20.9 22 0.00077 30.1 0.2 51 56-109 90-140 (344)
481 1zco_A 2-dehydro-3-deoxyphosph 20.8 1.9E+02 0.0066 23.2 5.8 72 104-183 131-205 (262)
482 3l55_A B-1,4-endoglucanase/cel 20.8 63 0.0021 27.4 3.0 23 157-179 91-113 (353)
483 2wlt_A L-asparaginase; hydrola 20.8 1.9E+02 0.0063 24.3 5.8 11 136-146 242-252 (332)
484 3dzv_A 4-methyl-5-(beta-hydrox 20.8 94 0.0032 25.2 3.9 47 117-178 48-96 (273)
485 1sjd_A N-acylamino acid racema 20.8 1.2E+02 0.0041 25.7 4.8 79 111-210 189-269 (368)
486 2rdx_A Mandelate racemase/muco 20.7 1.9E+02 0.0066 24.6 6.1 47 158-210 225-273 (379)
487 3ljs_A Fructokinase; fructokia 20.7 3.6E+02 0.012 22.2 8.5 40 136-178 129-168 (338)
488 1tqx_A D-ribulose-5-phosphate 20.6 3.1E+02 0.01 21.4 8.2 41 137-177 139-180 (227)
489 1ece_A Endocellulase E1; glyco 20.6 65 0.0022 27.1 3.1 24 156-179 94-117 (358)
490 1n8f_A DAHP synthetase; (beta/ 20.4 3.9E+02 0.013 22.6 7.5 33 152-184 239-273 (350)
491 2ovl_A Putative racemase; stru 20.3 96 0.0033 26.4 4.1 46 157-208 229-276 (371)
492 1vq8_F 50S ribosomal protein L 20.3 98 0.0034 21.3 3.4 45 118-176 34-78 (120)
493 2p3z_A L-rhamnonate dehydratas 20.3 92 0.0031 27.1 4.0 22 157-178 260-283 (415)
494 2e11_A Hydrolase; dimethylarse 20.3 1.4E+02 0.0047 23.8 4.9 53 117-176 21-82 (266)
495 2qgy_A Enolase from the enviro 20.3 1.1E+02 0.0037 26.3 4.5 48 157-210 232-281 (391)
496 3bdk_A D-mannonate dehydratase 20.3 1.5E+02 0.0053 25.4 5.3 41 136-177 44-84 (386)
497 1wky_A Endo-beta-1,4-mannanase 20.1 66 0.0023 28.5 3.1 23 156-178 71-93 (464)
No 1
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=100.00 E-value=1.7e-42 Score=304.03 Aligned_cols=342 Identities=49% Similarity=0.755 Sum_probs=268.5
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEe
Q 018243 4 RTVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVIL 83 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~ 83 (359)
.+|||+++.+..|++.+++++.+.......|+..+...++++.+++++|.+..++++||++|+..++.++. ++||+|++
T Consensus 4 ~~i~~~~~~~~~p~~~~~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~~~~~~~-~~gd~Vl~ 82 (347)
T 1jg8_A 4 MMIDLRSDTVTKPTEEMRKAMAQAEVGDDVYGEDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMAHT-QRGDEVIL 82 (347)
T ss_dssp -CEECSCGGGCCCCHHHHHHHHTCCCCCGGGTCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHC-CTTCEEEE
T ss_pred eEEEeccccCCCCCHHHHHHHhcCCCCCcccCCChHHHHHHHHHHHHhCCceEEEecCcHHHHHHHHHHhc-CCCCEEEE
Confidence 46899999888888999999987654445677788999999999999999888999999999998888877 59999999
Q ss_pred cCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC-ceecChhhHHHH
Q 018243 84 GDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG-GRCLSVEYTDSV 162 (359)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt-G~~~~~~~l~~i 162 (359)
++|+|.+.+..+......|++++.+ .++++.+|++++++.+++... ..+++++|+++++ +||| |.++|.+++++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~--~~~~~~~v~~~~~-~npt~G~~~~~~~l~~i 158 (347)
T 1jg8_A 83 EADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNI--HFPRTSLIAIENT-HNRSGGRVVPLENIKEI 158 (347)
T ss_dssp ETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCT--TSCCEEEEEEESS-BTTTTSBCCCHHHHHHH
T ss_pred cCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhccccc--cccCceEEEEecc-ccccCCccCcHHHHHHH
Confidence 9999987665222356678888888 555677899999999973100 0026899999554 4599 999999999999
Q ss_pred HHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHHhhCCCcchhH
Q 018243 163 GEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVG 242 (359)
Q Consensus 163 ~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (359)
.++|++||+++|+|++|.++.....+.+...+....|.+++|+||++++|.|++++.++++++.++..+..++.+..+..
T Consensus 159 ~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (347)
T 1jg8_A 159 CTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDRDFIERARKARKMLGGGMRQAG 238 (347)
T ss_dssp HHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECHHHHHHHHHHHHHHTCCCSSTH
T ss_pred HHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCceEEEEcCHHHHHHHHHHHHHcCCchhHHH
Confidence 99999999999999998765443334445555457888888999999988887788899999888777777776665566
Q ss_pred HHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC
Q 018243 243 VLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES 322 (359)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~ 322 (359)
..++++..+++...+ .+++..++++++.+.|+++ ++++...+..++++|+.++. .+.+..++.++|.++||.+.+++
T Consensus 239 ~~~~~~~~~l~~~~~-~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~~~ 315 (347)
T 1jg8_A 239 VLAAAGIIALTKMVD-RLKEDHENARFLALKLKEI-GYSVNPEDVKTNMVILRTDN-LKVNAHGFIEALRNSGVLANAVS 315 (347)
T ss_dssp HHHHHHHHHHHHSST-THHHHHHHHHHHHHHHHHH-TCBCCGGGCCSSEEEEECTT-SSSCHHHHHHHHHHHTEECEEEE
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhc-CceeccCCCcceEEEEEccc-ccCCHHHHHHHHHHCCCEEecCC
Confidence 666666666765443 3344456778889999888 77653334467889988863 12367889999988999998877
Q ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 323 STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 323 ~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.+++|++++..++++++++++++|+++++++
T Consensus 316 ~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 316 DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 7899999987889999999999999988754
No 2
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=100.00 E-value=1.7e-37 Score=273.51 Aligned_cols=328 Identities=21% Similarity=0.346 Sum_probs=254.3
Q ss_pred cCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCe--EEecCC
Q 018243 9 RSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSE--VILGDN 86 (359)
Q Consensus 9 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~--vl~~~~ 86 (359)
.+.++.+++|++.+++.+.. ....|+..+...++++.++++++.+..++++||++|+..++..++. +|++ |+++.+
T Consensus 20 ~~~~~~g~~p~v~~ai~~~~-~~~~~~~~~~~~~l~~~la~~~~~~~~i~~~~g~~a~~~a~~~~~~-~g~~~vvi~~~~ 97 (359)
T 3pj0_A 20 NGPRNVGVLTEALQNIDDNL-ESDIYGNGAVIEDFETKIAKILGKQSAVFFPSGTMAQQIALRIWAD-RKENRRVAYHPL 97 (359)
T ss_dssp SSCCBHHHHHHHTTTSCTTC-BCCBTTBSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHH-HHTCCEEEECTT
T ss_pred CCccccCCCHHHHHHHHhhc-ccCcccCCHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHHh-cCCCcEEEEecc
Confidence 34455667799999998843 4456777899999999999999999888899999999999998884 6765 666777
Q ss_pred CcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHH
Q 018243 87 SHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIA 166 (359)
Q Consensus 87 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~ 166 (359)
+|++.+.........|.+++.++. +++.+|+++|++. . +++++|++++++|+++|.+++.+++++|+++|
T Consensus 98 ~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~-~--------~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~ 167 (359)
T 3pj0_A 98 SHLEIHEQDGLKELQQITPLLLGT-ANQLLTIDDIKSL-R--------EPVSSVLIELPQREIGGQLPAFEELEKISEYC 167 (359)
T ss_dssp CHHHHSSTTHHHHHHCCEEEECSC-TTSCCCHHHHHTC-S--------SCCSEEEEESSBGGGTSBCCCHHHHHHHHHHH
T ss_pred ceeeehhcchHHHhcCceEEecCC-cCCCcCHHHHHhc-c--------CCceEEEEEecccCCCcccCCHHHHHHHHHHH
Confidence 776655422222456888888876 5678999999987 4 68999999887764448999999999999999
Q ss_pred HHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHH
Q 018243 167 KKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCA 246 (359)
Q Consensus 167 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (359)
++||+++|+|++|.++.....+.+..++....|+++.|+||++++|.||+++.++++++.++......+.++......++
T Consensus 168 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 247 (359)
T 3pj0_A 168 HEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIAGAILAGNDDFVQEAKIWKRRYGGDLISLYPYIL 247 (359)
T ss_dssp HHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSSCEEEEECHHHHHHHHHHHHHTTCCCSCCHHHHH
T ss_pred HHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcceEEEECCHHHHHHHHHHHHHhCCCcchhHHHHH
Confidence 99999999999987665444444555555678999899999998888888999999999988777666655544455555
Q ss_pred HHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC----
Q 018243 247 AALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES---- 322 (359)
Q Consensus 247 ~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~---- 322 (359)
++..+++...+ ..++..++++++.+.|+++|++++...+..++++|+.++.+...+..++.+.|.++||.+.++.
T Consensus 248 a~~~~l~~~~~-~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~ 326 (359)
T 3pj0_A 248 SADYYFEKRIG-KMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKS 326 (359)
T ss_dssp HHHHHHHHHGG-GHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEE
T ss_pred HHHHHHHHHHH-HhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcEecCCccccC
Confidence 55566665544 5666788899999999999899885345688899998876434567889999999999997763
Q ss_pred --CcEEEEEeCCC---CCHHHHHHHHHHHHHH
Q 018243 323 --STRVRIVVHHQ---ISANDVHYTLSCFQKI 349 (359)
Q Consensus 323 --~~~lRi~~~~~---~~~~~i~~~~~~l~~~ 349 (359)
..++|+++... .+.+++++++++|.+.
T Consensus 327 ~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 327 ADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp TTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred CCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 35689987432 5778888888888764
No 3
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=100.00 E-value=5.6e-37 Score=269.92 Aligned_cols=339 Identities=19% Similarity=0.262 Sum_probs=249.7
Q ss_pred ccccccccCCCCCChHHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHhCCCC-eEEcCCchHHHHHHHHHhhhhcCC
Q 018243 2 VTRTVDLRSDTVTKPTEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVMGKEA-GLFVPSGTMGNLISVLVHCETRGS 79 (359)
Q Consensus 2 ~~~~id~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~gt~a~~~~l~~~~~~~g~ 79 (359)
.+.+|||.+++...|+|++++++.+.... ...|+..+...++++.+++++|.+. .++++||++|+..++..++ ++|+
T Consensus 6 ~~~~id~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~v~~~~~gt~a~~~al~~~~-~~gd 84 (356)
T 1v72_A 6 RPPALGFSSDNIAGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSAMT-PPWG 84 (356)
T ss_dssp CCCCCBCSCGGGCCCCHHHHHHHHHTTSSCCCSTTCSHHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHHHTSC-CTTE
T ss_pred CCceEeeccCCccCCCHHHHHHHHhhccCcccccccchHHHHHHHHHHHHhCCCCcEEEeCCccHHHHHHHHHhc-CCCC
Confidence 35689999998888889999999987543 3456667888999999999999654 3788999999999999887 5999
Q ss_pred eEEecCCCcceeeccccccccC-CccceeeecCCCCCCCHHHHHH-HhcCCCCCccCCceeEEEEeccccCCCceecChh
Q 018243 80 EVILGDNSHIHIYENGGISTIG-GVHPRTVKNNQDGTMDIDLIEA-AIRDPKGEIVYPTTRLICLENTHANCGGRCLSVE 157 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~~~l~~-~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~ 157 (359)
+|+++.++|++.+..+...... |.+++.++.+ ++.+|+++|++ .+++..+ ...+++++|+++++ +| ||.+++.+
T Consensus 85 ~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~-~~~~~~~~v~~~~~-~~-tG~~~~~~ 160 (356)
T 1v72_A 85 NIYCHPASHINNDECGAPEFFSNGAKLMTVDGP-AAKLDIVRLRERTREKVGD-VHTTQPACVSITQA-TE-VGSIYTLD 160 (356)
T ss_dssp EEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG-GGCCCHHHHHHHTTSSTTC-TTSCEEEEEEEESS-CT-TSCCCCHH
T ss_pred EEEEcCccchhhhhchHHHHHhCCcEEEEecCC-CCeEcHHHHHHHhhhcchh-hccCCceEEEEEcC-CC-CCccCCHH
Confidence 9999999998877621123333 8888888764 57789999999 8873100 01126899999775 55 99999999
Q ss_pred hHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh--hcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHHhh
Q 018243 158 YTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL--VQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRKTL 234 (359)
Q Consensus 158 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~ 234 (359)
++++|.++|++||+++|+|++|..+.....+.....+ ....|++++|+||+ |+|.| |++++++++.+.++......
T Consensus 161 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~~~~~~~~~~~~~~~~ 239 (356)
T 1v72_A 161 EIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIVLFNTSLATEMSYRRKRA 239 (356)
T ss_dssp HHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEEESSGGGHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEEEECHHHHhhHHHHhhcc
Confidence 9999999999999999999997654332223222222 13678888999999 77888 78888999888877654443
Q ss_pred CCCcchhHHHHHHHHHHHHH-hHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHh
Q 018243 235 GGGMRQVGVLCAAALVALQE-NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEE 313 (359)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 313 (359)
+................++. ......++..++++++.+.|++++|+++.. +..++++|+.++. ++.++|.+
T Consensus 240 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~~~~~~~~~~~-------~~~~~l~~ 311 (356)
T 1v72_A 240 GHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLG-GTEANILFCRLDS-------AMIDALLK 311 (356)
T ss_dssp TCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEES-CCCSSEEEEEECH-------HHHHHHHH
T ss_pred CchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEcc-CCCccEEEEEcCH-------HHHHHHHh
Confidence 32221111211112223322 122255667788999999999988998754 4578888888752 78888989
Q ss_pred cCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 314 HGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 314 ~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+||.+.++. ..++|++++..++++++++++++|++++++..
T Consensus 312 ~gi~v~~g~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~ 354 (356)
T 1v72_A 312 AGFGFYHDRWGPNVVRFVTSFATTAEDVDHLLNQVRLAADRTQ 354 (356)
T ss_dssp TTCBCBCSSSSTTEEEEECCTTCCHHHHHHHHHHHHHTC----
T ss_pred cCeEEeccccCCCeEEEEecCCCCHHHHHHHHHHHHHHHHhhc
Confidence 999998653 57899999888999999999999999887653
No 4
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=100.00 E-value=1e-36 Score=268.33 Aligned_cols=306 Identities=20% Similarity=0.287 Sum_probs=238.5
Q ss_pred CCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCC--eEEecCCCcceeeccccccccCCccceee
Q 018243 31 DDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGS--EVILGDNSHIHIYENGGISTIGGVHPRTV 108 (359)
Q Consensus 31 ~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~--~vl~~~~~~~~~~~~~~~~~~~g~~~~~v 108 (359)
...|+.++...++++.+++++|.+..++++||++|+..++..+.. +|+ .|+++.++|++.+..+......|++++.+
T Consensus 40 ~~~y~~~~~~~~l~~~la~~~~~~~~i~~~~G~~a~~~al~~~~~-~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v 118 (357)
T 3lws_A 40 SDQYGTGAIIEPFEQKFADVLGMDDAVFFPSGTMAQQVALRIWSD-ETDNRTVAYHPLCHLEIHEQDGLKELHPIETILV 118 (357)
T ss_dssp CEETTEETTHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHH-HHTCCEEEECTTCHHHHSSTTHHHHHSSCEEEEC
T ss_pred cccccCChHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHHhh-cCCCcEEEecccceeeeeccchhhhccCcEEEEe
Confidence 445777788999999999999998889999999999999988884 776 78888888877665222345668888888
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC-ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG-GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL 187 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt-G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~ 187 (359)
+. +++.+|+++|++. . . +++|++++++| || |.+++.+++++|+++|++||+++|+|++|.++.....
T Consensus 119 ~~-~~~~~d~~~l~~~-~--------~-~~~v~~~~p~n-p~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~ 186 (357)
T 3lws_A 119 GA-ADRLMTLDEIKAL-P--------D-IACLLLELPQR-EIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYY 186 (357)
T ss_dssp SC-TTSCCCHHHHHTC-C--------S-CSEEEEESSBG-GGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHH
T ss_pred cC-CCCCcCHHHHhcC-c--------C-cceEEEEcccc-cCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhc
Confidence 74 5667899998875 2 3 77888866655 87 9999999999999999999999999999865544444
Q ss_pred CchhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHH
Q 018243 188 GVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKA 267 (359)
Q Consensus 188 ~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 267 (359)
+.+...+....|+++.|+||++++|.||++++++++++.++......+.++......++++..+++...+ ..+++.+++
T Consensus 187 ~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~ 265 (357)
T 3lws_A 187 EKTAAEIAGLFDSIYISFYKGLGGIAGAILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYELRKD-RMGQYYEQA 265 (357)
T ss_dssp TCCHHHHHTTSSEEEEESSSTTCCSSCEEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHTT-CHHHHHHHH
T ss_pred CCChHHHHhcCCEEEEeccccCCCCceEEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 5555555556888888999999778889999999999998877777666555455555566666766544 455567888
Q ss_pred HHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC-----CcEEEEEeCCC---CCHHHH
Q 018243 268 KLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES-----STRVRIVVHHQ---ISANDV 339 (359)
Q Consensus 268 ~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-----~~~lRi~~~~~---~~~~~i 339 (359)
+++.+.|+++|++++...+..++++|+.++.....+..++.+.|.++||.+.++. ..++|+++... .+.+++
T Consensus 266 ~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l 345 (357)
T 3lws_A 266 KQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTR 345 (357)
T ss_dssp HHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHH
T ss_pred HHHHHHHHhCCCCeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHH
Confidence 9999999999999874445688999999876322346788999999999997752 34799987533 578889
Q ss_pred HHHHHHHHHHH
Q 018243 340 HYTLSCFQKIY 350 (359)
Q Consensus 340 ~~~~~~l~~~~ 350 (359)
++++++|.+++
T Consensus 346 ~~al~~l~~al 356 (357)
T 3lws_A 346 DAGFARLRQAF 356 (357)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99988888765
No 5
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=1.7e-36 Score=270.95 Aligned_cols=331 Identities=15% Similarity=0.177 Sum_probs=251.6
Q ss_pred ccccccCCCCCC--hHHHHHHHHHcCCCC--------CCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHh
Q 018243 4 RTVDLRSDTVTK--PTEAMRAAMASAEVD--------DDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~~--~~~~~~~a~~~~~~~--------~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~ 73 (359)
.+|||.++++.+ ++|.+.+++.+.... ...++..+...++++.++++++.+..+++++|++|+..++..+
T Consensus 44 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~l~~~ 123 (399)
T 3tqx_A 44 EVLNFCANNYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGTDDTILYSSCFDANGGLFETL 123 (399)
T ss_dssp EEEECSSCCTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHH
T ss_pred eEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCCCcEEEECchHHHHHHHHHHh
Confidence 579999997644 347777777653321 1124456778999999999999998899999999999988888
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee
Q 018243 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC 153 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~ 153 (359)
+ ++|+.|+++.|+|.+... + ++..|.+++.++.. |+++|++.+++..... .++++|++++ ++||||.+
T Consensus 124 ~-~~gd~v~~~~~~~~~~~~-~--~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~--~~~~~v~~~~-~~nptG~~ 191 (399)
T 3tqx_A 124 L-GPEDAIISDELNHASIID-G--IRLCKAQRYRYKNN-----AMGDLEAKLKEADEKG--ARFKLIATDG-VFSMDGII 191 (399)
T ss_dssp C-CTTCEEEEETTCCHHHHH-H--HHSCCSEEEEECTT-----CTTHHHHHHHHHHTTT--CSSEEEEEES-EETTTTEE
T ss_pred c-CCCCEEEECCcccHHHHH-H--HHHcCCceeEeCCC-----CHHHHHHHHHhhhccC--CCceEEEEeC-CCCCCCCc
Confidence 7 599999999999988665 3 77788888888753 7788888887321100 1788999966 55699999
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh---hcCccEEEEeccccCCCceeeEEecCHHHHHHHHHH
Q 018243 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL---VQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRL 230 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~ 230 (359)
++ +++|.++|++||+++|+|++|+.+.....+.+.... ....|+++.|+||+++++.||++++++++++.+...
T Consensus 192 ~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~~~~~~~~~~~~~ 268 (399)
T 3tqx_A 192 AD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASGGYTSGHKEIIEWLRNR 268 (399)
T ss_dssp CC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCCEEEEECHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCceEEEEcCHHHHHHHHHh
Confidence 98 899999999999999999998655443333333332 236688888999999966779999999999988765
Q ss_pred HHhhCCCcchhHHHHHHHHHHHHH---hHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHH
Q 018243 231 RKTLGGGMRQVGVLCAAALVALQE---NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACL 307 (359)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (359)
...+..+...+....+++..+++. ..++.++++.++++++.+.|+++ |+++. +..++++++.++. ..+..++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~--~~~~~~~ 343 (399)
T 3tqx_A 269 SRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKL-GFQLV--PGNHPIIPVMLGD--AQLATNM 343 (399)
T ss_dssp CHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-TCCBC--CCSSSEEEEEEEC--HHHHHHH
T ss_pred CcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc-CCCcC--CCCCCEEEEEeCC--HHHHHHH
Confidence 443322223344555555555543 34557788889999999999998 88775 4578888888875 2478899
Q ss_pred HHHHHhcCceeccC-------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 308 LKKLEEHGVLVMPE-------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 308 ~~~l~~~gi~~~~~-------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
.++|.++||.+.++ +..++|++++..++++++++++++|+++++++.
T Consensus 344 ~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 397 (399)
T 3tqx_A 344 ADHLLQEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKLG 397 (399)
T ss_dssp HHHHHHTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 99998899998643 346899999888999999999999999988753
No 6
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=1.1e-35 Score=268.77 Aligned_cols=335 Identities=11% Similarity=0.097 Sum_probs=250.0
Q ss_pred cccccccCCCCC---ChHHHHHHHHHcCCCCC----CccCCChHHHHHHHHHHHHh----CC---CCeEEcCCchHHHHH
Q 018243 3 TRTVDLRSDTVT---KPTEAMRAAMASAEVDD----DVLMHDPTAFRLETEMAKVM----GK---EAGLFVPSGTMGNLI 68 (359)
Q Consensus 3 ~~~id~~~~~~~---~~~~~~~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~----~~---~~~~~~~~gt~a~~~ 68 (359)
+.+|||.++.+. .|.+.+.+++.+..... ..|+..++..++++.+++++ |. +..++++||++++..
T Consensus 76 ~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~ 155 (448)
T 3aow_A 76 SDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDL 155 (448)
T ss_dssp SSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHH
T ss_pred CCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHH
Confidence 457999887654 36688888877654322 34666677899999999998 86 234677777888888
Q ss_pred HHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhc----CCCCCccCCceeEEEEec
Q 018243 69 SVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIR----DPKGEIVYPTTRLICLEN 144 (359)
Q Consensus 69 ~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~----~~~~~~~~~~~~~v~i~~ 144 (359)
++..++ ++||.|+++.|+|.+... .+...|.+++.++.+.++ +|+++|++.++ +. .++++|++.+
T Consensus 156 ~~~~l~-~~Gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~g-~d~~~L~~~l~~~~~~~------~~~k~v~~~~ 224 (448)
T 3aow_A 156 IGRVFL-NPGDIVVVEAPTYLAALQ---AFNFYEPQYIQIPLDDEG-MKVEILEEKLKELKSQG------KKVKVVYTVP 224 (448)
T ss_dssp HHHHHC-CTTCEEEEEESCCHHHHH---HHHTTCCEEEEEEEETTE-ECHHHHHHHHHHHHHTT------CCEEEEEECC
T ss_pred HHHHHc-CCCCEEEEeCCChHHHHH---HHHHcCCEEEEeccCCCC-CCHHHHHHHHhhhhccC------CCCeEEEECC
Confidence 888887 599999999999887654 366788899999876654 89999999987 31 3688887668
Q ss_pred cccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhc-CccEEEEeccccCCCce--eeEEecC
Q 018243 145 THANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQ-AADSASVCLSKGLGAPV--GSVIVGS 220 (359)
Q Consensus 145 ~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~-~~d~~~~s~~K~~g~~~--gg~~~~~ 220 (359)
.++||||.+++.+++++|.++|++||++||+||+|..+.+... ..++..+.. +.++++.|+||+++ |+ .||++++
T Consensus 225 ~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~ 303 (448)
T 3aow_A 225 TFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGD 303 (448)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEEC
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeC
Confidence 8888999999999999999999999999999999865443211 112333321 23456669999998 54 2899999
Q ss_pred HHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHH-----HhHHHHhhhHHHHHHHHHHHHhc-CC-CceEecCCccceEEE
Q 018243 221 KEFIKKARRLRKTLGGGMRQVGVLCAAALVALQ-----ENVLVMLDGDHKKAKLLAEGLNQ-LK-GLRVDVDAVETNIVY 293 (359)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~l~~~l~~-~~-g~~~~~~~~~~~~~~ 293 (359)
+++++.+.........+. +...+.++...++ .+.++.++++.++++++.+.|++ +| ++++. .+..++++|
T Consensus 304 ~~l~~~l~~~~~~~~~~~--~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~-~p~~g~~~~ 380 (448)
T 3aow_A 304 PGIIRKMEIAKQSTDLCT--NVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWT-KPEGGMFIW 380 (448)
T ss_dssp HHHHHHHHHHHHHHHSSC--CHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEC-CCSBSSEEE
T ss_pred HHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe-CCCccEEEE
Confidence 999998876655443333 3344444444443 33454666777889999999987 57 68764 345788999
Q ss_pred EEeccchHHHHHHHHHHHHhcCceeccC--------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 294 FEITEDSKLYAACLLKKLEEHGVLVMPE--------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 294 ~~~~~~~~~~~~~~~~~l~~~gi~~~~~--------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
+.++.. .+..++.+.|.++||.+.|+ +..++|++++. .+++++++++++|.++++++.+
T Consensus 381 v~~~~~--~~~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~-~~~e~i~~~~~~L~~~l~~~~~ 447 (448)
T 3aow_A 381 VTLPDG--IDSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTY-VDEDKIMEGIKRLAETIKEELK 447 (448)
T ss_dssp EECSTT--CCHHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSS-SCTHHHHHHHHHHHHHHHHHHC
T ss_pred EEcCCC--CCHHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHHHHh
Confidence 998742 46778999998889999764 35689999974 5899999999999999987643
No 7
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=6.9e-36 Score=268.98 Aligned_cols=331 Identities=19% Similarity=0.200 Sum_probs=250.4
Q ss_pred ccccccCCCCCC--hHHHHHHHHHcCCCC-C-------CccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHh
Q 018243 4 RTVDLRSDTVTK--PTEAMRAAMASAEVD-D-------DVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~~--~~~~~~~a~~~~~~~-~-------~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~ 73 (359)
.+|||.++++.+ ++|.+.+++.+.... . ..++..+...++++.+++++|.+..++++||++|+..++.++
T Consensus 65 ~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~al~~l 144 (427)
T 2w8t_A 65 DTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGTTGAIVFSTGYMANLGIISTL 144 (427)
T ss_dssp EEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHH
T ss_pred eEEEEECcccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhCCCceEEecCcHHHHHHHHHHh
Confidence 468999997643 558888877664321 1 123346778999999999999988899999999999998888
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee
Q 018243 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC 153 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~ 153 (359)
. ++|+.|+++.++|.+... + +...|.+++.++. .|+++|++.+++..+ .++++|++++++ ||||.+
T Consensus 145 ~-~~gd~vl~~~~~h~~~~~-~--~~~~g~~~~~~~~-----~d~~~le~~l~~~~~----~~~~~v~~~~~~-n~tG~~ 210 (427)
T 2w8t_A 145 A-GKGEYVILDADSHASIYD-G--CQQGNAEIVRFRH-----NSVEDLDKRLGRLPK----EPAKLVVLEGVY-SMLGDI 210 (427)
T ss_dssp S-CTTCEEEEETTCCHHHHH-H--HHHSCSEEEEECT-----TCHHHHHHHHHTSCS----SSCEEEEEESEE-TTTTEE
T ss_pred c-CCCCEEEECCcccHHHHH-H--HHHcCCeeEEeCC-----CCHHHHHHHHHhccC----CCCeEEEEcCCC-CCCCCc
Confidence 7 599999999999988765 3 6677888888874 499999999984210 178899997766 599999
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh---hcCccEEEEeccccCCCceeeEEecCHHHHHHHHHH
Q 018243 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL---VQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRL 230 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~ 230 (359)
.+ +++|.++|++||+++|+||+|+.+.....+...... ..+.|+++.|+||++|. .||++++++++++.+...
T Consensus 211 ~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~-~gG~v~~~~~l~~~l~~~ 286 (427)
T 2w8t_A 211 AP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGT-VGGFVVSNHPKFEAVRLA 286 (427)
T ss_dssp CC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCS-CCEEEEECCTTGGGGGGT
T ss_pred cC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhcc-CCCEEEeCHHHHHHHHHh
Confidence 88 899999999999999999999776654333333332 23568888999999984 568888888888776544
Q ss_pred HHhhCCCcchhHHHHHHHHHHHHHh--HHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHH
Q 018243 231 RKTLGGGMRQVGVLCAAALVALQEN--VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLL 308 (359)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (359)
...+..+...++...+++..+++.. .++.++++.++++++.+.|+++ |+.+..++..++++++.++. ..+..++.
T Consensus 287 ~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~--~~~~~~l~ 363 (427)
T 2w8t_A 287 CRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAM-GFRLGTETCDSAIVAVMLED--QEQAAMMW 363 (427)
T ss_dssp CHHHHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSSEEEEEESS--HHHHHHHH
T ss_pred cccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCCEEEEEECC--HHHHHHHH
Confidence 2212112223445555555555433 2347778889999999999998 88874232267888888875 24678899
Q ss_pred HHHHhcCceeccCC-------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 309 KKLEEHGVLVMPES-------STRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 309 ~~l~~~gi~~~~~~-------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
+.|.++||.+.++. ..++|++++..++++++++++++|+++++++.+
T Consensus 364 ~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~~ 417 (427)
T 2w8t_A 364 QALLDGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVGV 417 (427)
T ss_dssp HHHHHTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 99988899986642 368999998888999999999999999988754
No 8
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=2.1e-35 Score=264.11 Aligned_cols=332 Identities=15% Similarity=0.163 Sum_probs=248.8
Q ss_pred cccccccCCCCCC--hHHHHHHHHHcCCCC-CC-----cc--CCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHH
Q 018243 3 TRTVDLRSDTVTK--PTEAMRAAMASAEVD-DD-----VL--MHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~~~~--~~~~~~~a~~~~~~~-~~-----~~--~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~ 72 (359)
..+|||.++++.+ ++|.+.+++.+.... .. .| +..+...++++.+++++|.+..+++++|++++..++..
T Consensus 45 ~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~ 124 (401)
T 1fc4_A 45 SHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFET 124 (401)
T ss_dssp CEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHH
T ss_pred ccEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhCCCcEEEeCChHHHHHHHHHH
Confidence 3578999987665 368888888764321 11 12 22577899999999999998779999999999998888
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018243 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
++ ++|+.|+++.++|.+.+. + +...|.+++.++. .|+++|++.+++..+. ..++++|++++ ++||||.
T Consensus 125 ~~-~~gd~v~~~~~~~~~~~~-~--~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~--~~~~~~v~~~~-~~nptG~ 192 (401)
T 1fc4_A 125 LL-GAEDAIISDALNHASIID-G--VRLCKAKRYRYAN-----NDMQELEARLKEAREA--GARHVLIATDG-VFSMDGV 192 (401)
T ss_dssp HC-CTTCEEEEETTCCHHHHH-H--HHTSCSEEEEECT-----TCHHHHHHHHHHHHHT--TCSSEEEEEES-EETTTTE
T ss_pred Hc-CCCCEEEEcchhHHHHHH-H--HHHcCCceEEECC-----CCHHHHHHHHHHhhcc--CCCceEEEEeC-CcCCCCC
Confidence 87 599999999999987765 2 6678888888864 3899999988731000 01688888855 5569999
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH---hhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHH
Q 018243 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR---RLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARR 229 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~---~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~ 229 (359)
+++ +++|.++|+++|+++|+|++|+.+.....+.... .+..+.|+++.|+||+++++.||++++++++++.+..
T Consensus 193 ~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~gG~~~~~~~~~~~l~~ 269 (401)
T 1fc4_A 193 IAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQ 269 (401)
T ss_dssp ECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSCEEEEECHHHHHHHHH
T ss_pred CCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCCEEEEcCHHHHHHHHH
Confidence 998 8999999999999999999986444322232222 2223568888899999944558999999999988876
Q ss_pred HHHhhCCCcchhHHHHHHHHHHHHHhH--HHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHH
Q 018243 230 LRKTLGGGMRQVGVLCAAALVALQENV--LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACL 307 (359)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (359)
....+..+...+...++++..+++... ++.+++..++++++.+.|+++ ++++. +..++++|+.++. +.+..++
T Consensus 270 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~--~~~~~~l 344 (401)
T 1fc4_A 270 RSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA-GFTLA--GADHAIIPVMLGD--AVVAQKF 344 (401)
T ss_dssp HCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCCBC--CSSSSEEEEEEEC--HHHHHHH
T ss_pred hCcCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCccc--CCCCCEEEEEcCC--hHHHHHH
Confidence 543221122335555666666665432 347778889999999999998 88775 4578899998864 3577889
Q ss_pred HHHHHhcCceeccCC-------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 308 LKKLEEHGVLVMPES-------STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 308 ~~~l~~~gi~~~~~~-------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
.+.|.++||.+.++. ..++|++++..++++++++++++|+++++++.
T Consensus 345 ~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 398 (401)
T 1fc4_A 345 ARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLG 398 (401)
T ss_dssp HHHHHHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 999988999997653 35799999878999999999999999988764
No 9
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=1e-35 Score=264.31 Aligned_cols=329 Identities=20% Similarity=0.203 Sum_probs=246.2
Q ss_pred ccccccCCCCCC-hHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHHhhhhcCCe
Q 018243 4 RTVDLRSDTVTK-PTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLVHCETRGSE 80 (359)
Q Consensus 4 ~~id~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~~~~~~g~~ 80 (359)
.+|||.++.+.. +++.+.+++.+.......|+..+...++++.++++++.+ ..++++||++++..++..+. ++|++
T Consensus 26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~ 104 (381)
T 1v2d_A 26 GAVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLV-GPGDE 104 (381)
T ss_dssp TCEECCCCSCSSCCCHHHHHHHHHHTTTSCSCCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHC-CTTCE
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhC-CCCCE
Confidence 468998886653 458888888876543334666667899999999999985 45788888999999999887 59999
Q ss_pred EEecCCCcceeeccccccccCCccceeeecC---CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChh
Q 018243 81 VILGDNSHIHIYENGGISTIGGVHPRTVKNN---QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVE 157 (359)
Q Consensus 81 vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~ 157 (359)
|++++|+|.+... .++..|.+++.++.+ +++.+|+++|++.++ +++++|++++ ++||||.++|.+
T Consensus 105 Vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~-~~nptG~~~~~~ 172 (381)
T 1v2d_A 105 VVVLEPFFDVYLP---DAFLAGAKARLVRLDLTPEGFRLDLSALEKALT--------PRTRALLLNT-PMNPTGLVFGER 172 (381)
T ss_dssp EEEEESCCTTHHH---HHHHTTCEEEEEECEEETTEEECCHHHHHTTCC--------TTEEEEEEES-SCTTTCCCCCHH
T ss_pred EEEcCCCchhHHH---HHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcC--------cCCEEEEECC-CCCCCCCccCHH
Confidence 9999999887554 367788899888765 557789999999887 6789999965 566999999999
Q ss_pred hHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCce--eeEEecCHHHHHHHHHHHHhhC
Q 018243 158 YTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV--GSVIVGSKEFIKKARRLRKTLG 235 (359)
Q Consensus 158 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~--gg~~~~~~~~~~~~~~~~~~~~ 235 (359)
++++|.++|++||+++|+|++|..+.....+.+...+..+.++++.|+||++|.++ .|++++++++++.++.......
T Consensus 173 ~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~ 252 (381)
T 1v2d_A 173 ELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTS 252 (381)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHHhhcc
Confidence 99999999999999999999986543321223333332367788889999998654 3888899888888876665444
Q ss_pred CCcchhHHHHHHHHHHHH-----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHH
Q 018243 236 GGMRQVGVLCAAALVALQ-----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKK 310 (359)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (359)
.+.+ ...++++..+++ .+.++.++++.++++++.+.|++. |+++.. +..+.++|+.++.. + +.+.
T Consensus 253 ~~~~--~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~~~---~---~~~~ 322 (381)
T 1v2d_A 253 FSAP--TPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-GLRVYV-PEGTYFLMAELPGW---D---AFRL 322 (381)
T ss_dssp SSCC--HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCCEEC-CSBSSEEEEECTTC---C---HHHH
T ss_pred cCCC--cHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC-CCEecC-CCcceEEEEecChH---h---HHHH
Confidence 4442 233333333443 334556777888999999999996 888754 34577889988752 2 6667
Q ss_pred HHhcCceeccC--------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhhc
Q 018243 311 LEEHGVLVMPE--------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCEEN 357 (359)
Q Consensus 311 l~~~gi~~~~~--------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 357 (359)
|.++||.+.++ +..++|++++. +++++++++++|++++++.+...
T Consensus 323 l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~--~~~~i~~~~~~l~~~l~~~r~~~ 375 (381)
T 1v2d_A 323 VEEARVALIPASAFYLEDPPKDLFRFAFCK--TEEELHLALERLGRVVNSPREAE 375 (381)
T ss_dssp HHHTCEECEEGGGGCSSSCCTTEEEEECCS--CHHHHHHHHHHHHHHC-------
T ss_pred HHhCCEEEecchHhCCCCCCCCEEEEEeCC--CHHHHHHHHHHHHHHHhhccccc
Confidence 78999999764 35689999963 99999999999999998876543
No 10
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=5.6e-35 Score=257.83 Aligned_cols=318 Identities=17% Similarity=0.184 Sum_probs=241.6
Q ss_pred ccccccCCCCC-ChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHHhhhhcCCe
Q 018243 4 RTVDLRSDTVT-KPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLVHCETRGSE 80 (359)
Q Consensus 4 ~~id~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~~~~~~g~~ 80 (359)
.+|||.++.+. .++|.+.+++.+.......| +.+...++++.++++++.+ ..++++||++++..++..++ ++|++
T Consensus 33 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y-~~~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~~-~~gd~ 110 (363)
T 3ffh_A 33 KITKLSSNENPLGTSKKVAAIQANSSVETEIY-PDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLL-DTTTN 110 (363)
T ss_dssp CCEECSSCSCTTCCCHHHHHHHHTCBSCCCBC-----CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHC-STTCE
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHHhhcC-CCcchHHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHHHHc-cCCCE
Confidence 56999998554 45699999999876544444 3466799999999999974 35778888899999998887 59999
Q ss_pred EEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHH
Q 018243 81 VILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTD 160 (359)
Q Consensus 81 vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~ 160 (359)
|+++.|+|.+... .++..|.+++.++.++++.+|++++++.++ +++++|+++++ +||||.++|.+++.
T Consensus 111 vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~--------~~~~~v~~~~p-~nptG~~~~~~~l~ 178 (363)
T 3ffh_A 111 TVMATPTFVQYRQ---NALIEGAEVREIPLLQDGEHDLEGMLNAID--------EKTTIVWICNP-NNPTGNYIELADIQ 178 (363)
T ss_dssp EEEEESSCHHHHH---HHHHHTCEEEEEECCTTSCCCHHHHHHHCC--------TTEEEEEEESS-CTTTCCCCCHHHHH
T ss_pred EEEcCCChHHHHH---HHHHcCCEEEEecCCCCCCcCHHHHHHhcc--------cCCCEEEEeCC-CCCcCCCcCHHHHH
Confidence 9999999887554 367788899999888788999999999998 78999999665 56999999988888
Q ss_pred HHHHHHHHcCcEEEEecccccchhhhcCchhHhhh-c-CccEEEEeccccCCCcee--eEEecCHHHHHHHHHHHHhhCC
Q 018243 161 SVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV-Q-AADSASVCLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGG 236 (359)
Q Consensus 161 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~-~~d~~~~s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~ 236 (359)
++++.|++ |+++|+|++|+.+.. ....+..... . +..+++.|+||++|.++. |+++.++++.+.++.....
T Consensus 179 ~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~--- 253 (363)
T 3ffh_A 179 AFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNIVRPP--- 253 (363)
T ss_dssp HHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHHTCCS---
T ss_pred HHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHHHHHHHHhCCC---
Confidence 88777777 999999999864433 1111222221 1 222555699999985433 8888899999887655432
Q ss_pred CcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhc
Q 018243 237 GMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEH 314 (359)
Q Consensus 237 ~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 314 (359)
+..+...++++..+++ .+.++.+++..++++++.+.|++++++++. +..++++|+.++. +..++.+.|.++
T Consensus 254 -~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~--~~~~~~~~~~~~~----~~~~~~~~l~~~ 326 (363)
T 3ffh_A 254 -FNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLY--PANGNFVLIDLGI----EAGTIFSYLEKN 326 (363)
T ss_dssp -CCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEC--CCCSSEEEEECSS----CHHHHHHHHHHT
T ss_pred -CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCceEC--CCCCeEEEEECCC----CHHHHHHHHHHC
Confidence 2335555566666663 444557777888999999999996698875 3467889998875 577899999899
Q ss_pred CceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 315 GVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 315 gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
||.+.++. .+++|++++ +++++++++++|++++
T Consensus 327 gi~v~~g~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l 363 (363)
T 3ffh_A 327 GYITRSGAALGFPTAVRITIG---KEEDNSAVIALLEKLL 363 (363)
T ss_dssp TEECEETTTTTCTTEEEEECC---CHHHHHHHHHHHHHHC
T ss_pred CeEEEeCccCCCCCeEEEECC---CHHHHHHHHHHHHHhC
Confidence 99997764 578999984 8999999999998763
No 11
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=8.2e-36 Score=267.25 Aligned_cols=332 Identities=15% Similarity=0.128 Sum_probs=247.4
Q ss_pred ccccccCCCCC--ChHHHHHHHHHcCCCCC--CccCCCh----HHHHHHHHHHHHhCC-----CCeEEcCCchHHHHHHH
Q 018243 4 RTVDLRSDTVT--KPTEAMRAAMASAEVDD--DVLMHDP----TAFRLETEMAKVMGK-----EAGLFVPSGTMGNLISV 70 (359)
Q Consensus 4 ~~id~~~~~~~--~~~~~~~~a~~~~~~~~--~~~~~~~----~~~~l~~~la~~~~~-----~~~~~~~~gt~a~~~~l 70 (359)
.+|||.++++. .++|.+++++.+..... ..|+... ....+++.+++++|. +..++++||++|+..++
T Consensus 40 ~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~ 119 (407)
T 3nra_A 40 RPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAV 119 (407)
T ss_dssp CCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHH
T ss_pred ceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHH
Confidence 47999997655 45588888887754322 1244433 345555666666787 35577888888999988
Q ss_pred HHhhhhcCCeEEecCCCcceeeccccccccCCccceeeec------CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEec
Q 018243 71 LVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN------NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLEN 144 (359)
Q Consensus 71 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~------~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~ 144 (359)
.+++ ++|++|+++.|+|.+... .++..|.+++.++. +.++.+|+++|++.++ .++++|++++
T Consensus 120 ~~l~-~~gd~vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~ 187 (407)
T 3nra_A 120 AATV-ARGDKVAIVQPDYFANRK---LVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFK--------AGARVFLFSN 187 (407)
T ss_dssp HTTC-CTTCEEEEEESCCTHHHH---HHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHH--------TTCCEEEEES
T ss_pred HHhC-CCCCEEEEcCCcccchHH---HHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHh--------hCCcEEEEcC
Confidence 8887 599999999999887654 37778989999987 4678899999999998 6788888867
Q ss_pred cccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcC-chhHhhh---cCccEEEEeccccCCCce-e-eEEe
Q 018243 145 THANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALG-VPVRRLV---QAADSASVCLSKGLGAPV-G-SVIV 218 (359)
Q Consensus 145 ~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~---~~~d~~~~s~~K~~g~~~-g-g~~~ 218 (359)
+ +||||.++|.+++++|+++|++||+++|+|++|..+.+.... .+...+. .+.++++.|+||++|.++ + |+++
T Consensus 188 p-~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~ 266 (407)
T 3nra_A 188 P-NNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAF 266 (407)
T ss_dssp S-CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEE
T ss_pred C-CCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEE
Confidence 6 679999999999999999999999999999998665443111 1222221 233466779999998543 2 8888
Q ss_pred cCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEE
Q 018243 219 GSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFE 295 (359)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~ 295 (359)
+++++++.++.....+..+. ++..++++...++ ...++.+++..++++++.+.|+++|++.+. .+..++++|+.
T Consensus 267 ~~~~~~~~l~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~ 343 (407)
T 3nra_A 267 GSRAIIARMEKLQAIVSLRA--AGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFAR-TPQAGSYLFPR 343 (407)
T ss_dssp ECHHHHHHHHHHHHHHTSSS--CHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCC-CCSBSSEECCB
T ss_pred cCHHHHHHHHHHHhhhccCC--ChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceec-cCCeeEEEEEe
Confidence 99999999887776666554 3333444444442 344556777888899999999998888874 34567888888
Q ss_pred eccchHHHHHHHHHHHH-hcCceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 296 ITEDSKLYAACLLKKLE-EHGVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 296 ~~~~~~~~~~~~~~~l~-~~gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
++. .+.+..++.+.|. ++||.+.++ +..++|++++ .+++++++++++|++++++++
T Consensus 344 ~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~~~~l~~~~~~~~ 406 (407)
T 3nra_A 344 LPK-LAVAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFS--QDHEAAVAAARRIVTLVERYR 406 (407)
T ss_dssp CCC-BSSCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECC--SCHHHHHHHHHHHHHHHHHHB
T ss_pred CCC-CCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHhh
Confidence 875 2346788999994 579999764 3578999996 499999999999999998764
No 12
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=3.1e-35 Score=261.93 Aligned_cols=330 Identities=15% Similarity=0.146 Sum_probs=248.2
Q ss_pred ccccccCCCCC-ChHHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHh----CC----CC-eEEcCCchHHHHHHHHH
Q 018243 4 RTVDLRSDTVT-KPTEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVM----GK----EA-GLFVPSGTMGNLISVLV 72 (359)
Q Consensus 4 ~~id~~~~~~~-~~~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~----~~----~~-~~~~~~gt~a~~~~l~~ 72 (359)
.+|||.++.+. .+++.+.+++.+.... ...|+..++..++++.+++++ |. +. .++++||++++..++..
T Consensus 27 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~ 106 (389)
T 1gd9_A 27 DVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSA 106 (389)
T ss_dssp SCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTT
T ss_pred CeEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHH
Confidence 57899988765 3457888887764422 234655556789999999988 73 35 67888889999999988
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018243 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
++ ++|++|++++|+|.+... .+...|.+++.++.+. ++.+|+++|++.++ +++++|++++ ++|||
T Consensus 107 ~~-~~gd~vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~-~~npt 173 (389)
T 1gd9_A 107 FL-KDGEEVLIPTPAFVSYAP---AVILAGGKPVEVPTYEEDEFRLNVDELKKYVT--------DKTRALIINS-PCNPT 173 (389)
T ss_dssp TC-CTTCEEEEEESCCTTHHH---HHHHHTCEEEEEECCGGGTTCCCHHHHHHHCC--------TTEEEEEEES-SCTTT
T ss_pred hC-CCCCEEEEcCCCchhHHH---HHHHCCCEEEEeccCCccCCCCCHHHHHHhcC--------cCceEEEEEC-CCCCC
Confidence 87 589999999999888654 3667788998887654 46789999999998 6788988855 56699
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhh--cCccEEEEeccccCCCce--eeEEecCHHHHH
Q 018243 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLV--QAADSASVCLSKGLGAPV--GSVIVGSKEFIK 225 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~--~~~d~~~~s~~K~~g~~~--gg~~~~~~~~~~ 225 (359)
|.++|.+++++|+++|++||+++|+|++|..+..... ..+...+. .+.|+++.|+||++|.++ .|++++++++.+
T Consensus 174 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 253 (389)
T 1gd9_A 174 GAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIE 253 (389)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHH
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHHHH
Confidence 9999999999999999999999999999866544211 22333332 245788889999998544 288999999998
Q ss_pred HHHHHHHhhCCCcchhHHHHHHHHHHHH---H--hHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccch
Q 018243 226 KARRLRKTLGGGMRQVGVLCAAALVALQ---E--NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDS 300 (359)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~--~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 300 (359)
.++........+. +...+.++..+++ . +.++.++++.++++++.+.|+++ |+++.. +..+.++|+.++. .
T Consensus 254 ~l~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~~-~ 328 (389)
T 1gd9_A 254 RMVKFQMYNATCP--VTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM-GLPTVK-PKGAFYIFPRIRD-T 328 (389)
T ss_dssp HHHHHHTTTTCSC--CHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCCC-CCBTTEECCBCGG-G
T ss_pred HHHHHHhhhccCC--CHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc-CCeecC-CCeeeEEEEeccC-C
Confidence 8876654443333 3444444455553 2 45556777888999999999998 887743 4456678888763 1
Q ss_pred HHHHHHHHHHHH-hcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 301 KLYAACLLKKLE-EHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 301 ~~~~~~~~~~l~-~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+.+..++.+.|. ++||.+.++. ..++|++++ .+++++++++++|.+++++.
T Consensus 329 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~~~~~ 386 (389)
T 1gd9_A 329 GLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYA--TAYEKLEEAMDRMERVLKER 386 (389)
T ss_dssp TCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECC--SCHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHhc
Confidence 236778999996 9999997653 568999996 48999999999999988764
No 13
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=3.4e-35 Score=262.29 Aligned_cols=335 Identities=16% Similarity=0.121 Sum_probs=246.5
Q ss_pred cccccccCCCCC---ChHHHHHHHHHcCCCC----CCccCCChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHHh
Q 018243 3 TRTVDLRSDTVT---KPTEAMRAAMASAEVD----DDVLMHDPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 3 ~~~id~~~~~~~---~~~~~~~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~~ 73 (359)
+.+|||.++.+. .|++.+.+++.+.... ...|+..++..++++.+++++|.+ ..++++||++++..++.++
T Consensus 32 ~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~ 111 (397)
T 2zyj_A 32 PGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVF 111 (397)
T ss_dssp TTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHH
T ss_pred CCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHh
Confidence 457899887543 3568888888765432 134555567899999999999864 2356666677888888888
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee
Q 018243 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC 153 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~ 153 (359)
. ++|++|+++.|+|.+... .+...|.+++.++.+.++ +|+++|++.+++ .++++|++.+.++||||.+
T Consensus 112 ~-~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~-~d~~~l~~~l~~-------~~~~~v~~~~~~~nptG~~ 179 (397)
T 2zyj_A 112 L-DEGSPVLLEAPSYMGAIQ---AFRLQGPRFLTVPAGEEG-PDLDALEEVLKR-------ERPRFLYLIPSFQNPTGGL 179 (397)
T ss_dssp C-CTTCEEEEEESCCHHHHH---HHHTTCCEEEEEEEETTE-ECHHHHHHHHHH-------CCCSCEEECCBSCTTTCCB
T ss_pred C-CCCCEEEEeCCCcHHHHH---HHHHcCCEEEecCcCCCC-CCHHHHHHHHhh-------cCCeEEEECCCCcCCCCCc
Confidence 7 589999999999887654 366788898888776554 899999999983 3678886546667899999
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhcC---cc-EEEEeccccCCCcee-eEEecCHHHHHHH
Q 018243 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQA---AD-SASVCLSKGLGAPVG-SVIVGSKEFIKKA 227 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~~---~d-~~~~s~~K~~g~~~g-g~~~~~~~~~~~~ 227 (359)
++.+++++|+++|++||+++|+||+|+.+..... ..+...+... .+ +++.|+||++|.+.+ |++++++++.+.+
T Consensus 180 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~l 259 (397)
T 2zyj_A 180 TPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHPEALQKL 259 (397)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEecccccccccceeEEEecCHHHHHHH
Confidence 9999999999999999999999999865443211 1233344222 23 556699999992233 8899999999888
Q ss_pred HHHHHhhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhc-CC-CceEecCCccceEEEEEeccchH
Q 018243 228 RRLRKTLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQ-LK-GLRVDVDAVETNIVYFEITEDSK 301 (359)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~-~~-g~~~~~~~~~~~~~~~~~~~~~~ 301 (359)
.........+. +...+.++...++ ...++..+++.++++++.+.|++ +| ++++.. +..++++|+.++. +
T Consensus 260 ~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~-~~~g~~~~~~~~~--~ 334 (397)
T 2zyj_A 260 VQAKQGADLHT--PMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTR-PKGGMFVWMELPK--G 334 (397)
T ss_dssp HHHHHHHHSSC--CHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECC-CSBSSEEEEECST--T
T ss_pred HHHHHhhcCCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEcc-CCccEEEEEEcCC--C
Confidence 76655443333 3344444455553 23444666677888999999987 57 687643 4578899999874 2
Q ss_pred HHHHHHHHHHHhcCceeccC--------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 302 LYAACLLKKLEEHGVLVMPE--------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 302 ~~~~~~~~~l~~~gi~~~~~--------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
.+..++.+.|.++||.+.++ +..++|++++. .+++++++++++|+++++++.+
T Consensus 335 ~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~l~~~~~ 395 (397)
T 2zyj_A 335 LSAEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYAT-LDREGIAEGVRRLGRALKGLLA 395 (397)
T ss_dssp CCHHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSS-SCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCC-CCHHHHHHHHHHHHHHHHHHHh
Confidence 46778999998889999764 35789999974 4899999999999999987653
No 14
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=3.1e-35 Score=258.62 Aligned_cols=323 Identities=14% Similarity=0.105 Sum_probs=245.6
Q ss_pred cccccccCCCCCC-hHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHHhhhhcCC
Q 018243 3 TRTVDLRSDTVTK-PTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLVHCETRGS 79 (359)
Q Consensus 3 ~~~id~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~~~~~~g~ 79 (359)
..+|||.++.+.. ++|.+.+++.+.......| +.+...++++.++++++.+ ..++++||++++..++..++ ++||
T Consensus 16 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y-~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~gd 93 (354)
T 3ly1_A 16 DNPIRINFNENPLGMSPKAQAAARDAVVKANRY-AKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYA-SLEA 93 (354)
T ss_dssp SSCEECSSCCCSSCCCHHHHHHHHHTGGGTTSC-CHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHC-CTTC
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHHHhhCcCC-CCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHh-CCCC
Confidence 4679999875554 5699999999876544445 3467799999999999974 34677778889988888887 5999
Q ss_pred eEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhH
Q 018243 80 EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYT 159 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l 159 (359)
+|+++.|+|.+... .++..|.+++.++.+.++.+|+++|++.+++. +++++|+++++ +||||.+++.+++
T Consensus 94 ~vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~~~v~l~~p-~nptG~~~~~~~l 163 (354)
T 3ly1_A 94 QLVIPELTYGDGEH---FAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAY------SGPSIVYLVNP-NNPTGTITPADVI 163 (354)
T ss_dssp EEEEESSSCTHHHH---HHHHTTCEEEEECCCTTSCCCHHHHHHHHHTC------SSCEEEEEESS-CTTTCCCCCHHHH
T ss_pred eEEECCCCchHHHH---HHHHcCCEEEEecCCCCCCCCHHHHHHHhccC------CCCCEEEEeCC-CCCcCCCcCHHHH
Confidence 99999999887654 36778999999988878999999999999842 37889999655 6699999999999
Q ss_pred HHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhc---CccEEEEeccccCCCce-e-eEEecCHHHHHHHHHHHHhh
Q 018243 160 DSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQ---AADSASVCLSKGLGAPV-G-SVIVGSKEFIKKARRLRKTL 234 (359)
Q Consensus 160 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~---~~d~~~~s~~K~~g~~~-g-g~~~~~~~~~~~~~~~~~~~ 234 (359)
.+|+++| ++|+++|+|++|..+.......+...... +.++++.|+||++|.++ + |+++.++++.+.++.....
T Consensus 164 ~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~- 241 (354)
T 3ly1_A 164 EPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYVAG- 241 (354)
T ss_dssp HHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGGTTC-
T ss_pred HHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHHHHHhcCC-
Confidence 9998888 89999999999764433211112222211 33466679999998543 3 8899999998887654443
Q ss_pred CCCcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHH
Q 018243 235 GGGMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLE 312 (359)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (359)
+..+...++++..+++ ...++.++++.++++++.+.|+++ ++.+. +..++++|+.++. +..++.+.|.
T Consensus 242 ---~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~--~~~~~~~~~~~~~----~~~~~~~~l~ 311 (354)
T 3ly1_A 242 ---EKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL-KLPYL--PSEGNFVFHQLVV----PLKDYQTHMA 311 (354)
T ss_dssp ---SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC--CCCSSEEEEECSS----CHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC--CCCceEEEEECCC----CHHHHHHHHH
Confidence 2234445555555553 344557777888999999999988 87764 3478889998875 5678999998
Q ss_pred hcCceec---cCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 313 EHGVLVM---PESSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 313 ~~gi~~~---~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
++||.+. .+...++|++++ +++++++++++|++++++
T Consensus 312 ~~gi~v~g~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 312 DAGVLIGRAFPPADNWCRISLG---TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp HTTEECCCCCTTCTTEEEEECC---CHHHHHHHHHHHHHHHHT
T ss_pred HCCEEEeecCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHHh
Confidence 9999986 124578999984 789999999999998764
No 15
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=3.2e-35 Score=264.60 Aligned_cols=344 Identities=14% Similarity=0.119 Sum_probs=248.3
Q ss_pred cccccccCCCCC---ChHHHHHHHHHcCCCC----CCccCCChHHHHHHHHHHHHh----CCC-----CeEEcCCchHHH
Q 018243 3 TRTVDLRSDTVT---KPTEAMRAAMASAEVD----DDVLMHDPTAFRLETEMAKVM----GKE-----AGLFVPSGTMGN 66 (359)
Q Consensus 3 ~~~id~~~~~~~---~~~~~~~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~----~~~-----~~~~~~~gt~a~ 66 (359)
+.+|||.++.+. .|++.+.+++.+.... ...|+..++..++++.+++++ |.+ ..++++||++++
T Consensus 43 ~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al 122 (425)
T 1vp4_A 43 KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQAL 122 (425)
T ss_dssp TTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHH
T ss_pred CCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHH
Confidence 457899887543 3568888888765432 134655567889999999998 842 235666667888
Q ss_pred HHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018243 67 LISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 67 ~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
..++.+++ ++|++|+++.|+|.+... .+...|.+++.++.++++ +|+++|++.+++..+..+..++++|++.+.+
T Consensus 123 ~~~~~~l~-~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~ 197 (425)
T 1vp4_A 123 DLIGKLFL-DDESYCVLDDPAYLGAIN---AFRQYLANFVVVPLEDDG-MDLNVLERKLSEFDKNGKIKQVKFIYVVSNF 197 (425)
T ss_dssp HHHHHHHC-CTTCEEEEEESCCHHHHH---HHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCGGGEEEEEEECSS
T ss_pred HHHHHHhC-CCCCEEEEeCCCcHHHHH---HHHHcCCEEEEeccCCCC-CCHHHHHHHHHhhhhcccCCCceEEEECCCC
Confidence 88888887 589999999999887654 366788899888776554 8999999998720000000278888655777
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhc-CccEEEEeccccCCCce--eeEEecCHH
Q 018243 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQ-AADSASVCLSKGLGAPV--GSVIVGSKE 222 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~-~~d~~~~s~~K~~g~~~--gg~~~~~~~ 222 (359)
+||||.++|.+++++|+++|++||+++|+||+|+.+.+... ..+...+.. +.++++.|+||+++ ++ .|+++++++
T Consensus 198 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~ 276 (425)
T 1vp4_A 198 HNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGSKE 276 (425)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECCHH
T ss_pred CCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccceEEEeeCHH
Confidence 88999999999999999999999999999999865443211 123333322 23466679999999 44 288999999
Q ss_pred HHHHHHHHHHhhCCCcchhHHHHHHHHHHHHH-----hHHHHhhhHHHHHHHHHHHHhcC-C---CceEecCCccceEEE
Q 018243 223 FIKKARRLRKTLGGGMRQVGVLCAAALVALQE-----NVLVMLDGDHKKAKLLAEGLNQL-K---GLRVDVDAVETNIVY 293 (359)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~l~~~l~~~-~---g~~~~~~~~~~~~~~ 293 (359)
+++.+.........+. +...++++..+++. +.++.++++.++++++.+.|++. | ++.+. .+..++++|
T Consensus 277 ~~~~l~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~-~~~~g~~~~ 353 (425)
T 1vp4_A 277 FIRKIVQAKQSADLCS--PAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWV-KSEGGLFIW 353 (425)
T ss_dssp HHHHHHHHHHHHHSSC--CHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEEC-CCSBSSEEE
T ss_pred HHHHHHHHhhhhcCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEe-cCCccEEEE
Confidence 9988876665544333 33444455555543 34445666778889999999874 5 57764 345788999
Q ss_pred EEeccchHHHHHHHHHHHHhcCceeccC--------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhhcC
Q 018243 294 FEITEDSKLYAACLLKKLEEHGVLVMPE--------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCEENG 358 (359)
Q Consensus 294 ~~~~~~~~~~~~~~~~~l~~~gi~~~~~--------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~ 358 (359)
+.++.. .+..++.+.|.++||.+.++ +..++||+++. .+++++++++++|+++++++.++++
T Consensus 354 ~~~~~~--~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~-~~~e~i~~~l~~l~~~l~~~~~~~~ 423 (425)
T 1vp4_A 354 LTLPEG--FDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCL-PPDEKIVEGIKRLREVVLEYGKEKH 423 (425)
T ss_dssp EECCTT--CCTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSS-SCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEcCCC--CCHHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCC-CCHHHHHHHHHHHHHHHHHHHhhcc
Confidence 998742 35668899997789999764 35689999974 4899999999999999998877654
No 16
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=4.9e-35 Score=260.45 Aligned_cols=325 Identities=14% Similarity=0.123 Sum_probs=247.2
Q ss_pred ccccccCCCCCC-hHHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHh----CCC----CeEEcCCchHHHHHHHHHh
Q 018243 4 RTVDLRSDTVTK-PTEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVM----GKE----AGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~~-~~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~----~~~----~~~~~~~gt~a~~~~l~~~ 73 (359)
.+|||.++.+.. +++.+.+++.+.... ...|+..++..++++.+++++ |.+ ..++++||++++..++..+
T Consensus 42 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l 121 (389)
T 1o4s_A 42 DVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMAL 121 (389)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHH
T ss_pred CEEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHh
Confidence 578999887653 347888888765432 234665567889999999988 542 3477778888999999888
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018243 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
+ ++|++|++++|+|.+... .+...|.+++.++.+. ++.+|+++|++.++ +++++|+++++ +||||
T Consensus 122 ~-~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~p-~nptG 188 (389)
T 1o4s_A 122 L-DPGDEVIVFSPVWVSYIP---QIILAGGTVNVVETFMSKNFQPSLEEVEGLLV--------GKTKAVLINSP-NNPTG 188 (389)
T ss_dssp C-CTTCEEEEEESCCTTHHH---HHHHTTCEEEEEECCGGGTTCCCHHHHHHTCC--------TTEEEEEEESS-CTTTC
T ss_pred C-CCCCEEEEcCCCchhHHH---HHHHcCCEEEEEecCCccCCCCCHHHHHHhcc--------cCceEEEEcCC-CCCCC
Confidence 7 589999999999887654 3677888999887764 46789999999998 67889988554 66999
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh--cCccEEEEeccccCCCce--eeEEecCHHHHHHH
Q 018243 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV--QAADSASVCLSKGLGAPV--GSVIVGSKEFIKKA 227 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d~~~~s~~K~~g~~~--gg~~~~~~~~~~~~ 227 (359)
.++|.+++++|.++|+++|+++|+|++|+.+.......+...+. .+.|+++.|+||++|.++ .|++++++++.+.+
T Consensus 189 ~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l 268 (389)
T 1o4s_A 189 VVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAV 268 (389)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHHHH
Confidence 99999999999999999999999999986544321122344442 256788889999998554 38899999999888
Q ss_pred HHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHH
Q 018243 228 RRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACL 307 (359)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (359)
.........+. +...+.++..+++...++.++++.++++++.+.|+++ |+++.. +..+.++|+.++. +..++
T Consensus 269 ~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~~----~~~~l 340 (389)
T 1o4s_A 269 SKIQSHTTSCI--NTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKKM-GVKFVE-PEGAFYLFFKVRG----DDVKF 340 (389)
T ss_dssp HHHHHHHTCSC--CHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCC-CSBSSEEEEECSS----CHHHH
T ss_pred HHHhhhcccCC--CHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc-CCeeec-CCcceEEEEeCCC----CHHHH
Confidence 77665544443 3444555555665434546777888999999999998 887743 4467778888762 56788
Q ss_pred HHHHH-hcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018243 308 LKKLE-EHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 308 ~~~l~-~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.++|. ++||.+.++. .+++|++++ .+++++++++++|.++++
T Consensus 341 ~~~l~~~~gi~v~~g~~f~~~~~~Ris~~--~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 341 CERLLEEKKVALVPGSAFLKPGFVRLSFA--TSIERLTEALDRIEDFLN 387 (389)
T ss_dssp HHHHHHHHCEECEEGGGGTCTTEEEEECC--SCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCEEEeCchhcCCCCeEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 99995 9999997763 458999996 589999999999998775
No 17
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=6.4e-35 Score=259.77 Aligned_cols=332 Identities=14% Similarity=0.162 Sum_probs=246.8
Q ss_pred cccccccCCCCCC-hHHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHhC----C----CCeEEcCCchHHHHHHHHH
Q 018243 3 TRTVDLRSDTVTK-PTEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVMG----K----EAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~~~~-~~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~----~----~~~~~~~~gt~a~~~~l~~ 72 (359)
..+|||.++.+.. +++.+.+++.+.... ...|+..++..++++.++++++ . +..++++||++|+..++.+
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~ 109 (388)
T 1j32_A 30 IDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLA 109 (388)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHH
T ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHH
Confidence 3578999987653 447788877664322 3346665667889999988873 2 2346777778999999998
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018243 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
++ ++|++|++++|+|.+... .++..|.+++.++.+. ++.+|+++|++.++ +++++|+++++ +|||
T Consensus 110 ~~-~~gd~vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~p-~npt 176 (388)
T 1j32_A 110 MI-EPGDEVIIPAPFWVSYPE---MVKLAEGTPVILPTTVETQFKVSPEQIRQAIT--------PKTKLLVFNTP-SNPT 176 (388)
T ss_dssp HC-CTTCEEEEESSCCTHHHH---HHHHTTCEEEEECCCGGGTTCCCHHHHHHHCC--------TTEEEEEEESS-CTTT
T ss_pred hc-CCCCEEEEcCCCChhHHH---HHHHcCCEEEEecCCcccCCCCCHHHHHHhcC--------cCceEEEEeCC-CCCC
Confidence 87 599999999999887554 3677888888887654 57789999999998 67899998665 6699
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhh---cCccEEEEeccccCCCce--eeEEecCHHHH
Q 018243 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLV---QAADSASVCLSKGLGAPV--GSVIVGSKEFI 224 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~---~~~d~~~~s~~K~~g~~~--gg~~~~~~~~~ 224 (359)
|.++|.+++++|.++|++||+++|+|++|+.+..... ..+...+. .+.++++.|+||++|.++ .|++++++++.
T Consensus 177 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~ 256 (388)
T 1j32_A 177 GMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLV 256 (388)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHHH
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHHHH
Confidence 9999999999999999999999999999765433211 11222221 246788889999997554 38899999998
Q ss_pred HHHHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchH
Q 018243 225 KKARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSK 301 (359)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 301 (359)
+.++........+. +...+.++..+++ .+.++.++++.++++++.+.|+++|++++.. +..+.++|+.++. .+
T Consensus 257 ~~l~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~~~~~~~~~~~-~~ 332 (388)
T 1j32_A 257 KAATKIQGHSTSNV--CTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPK-PDGAFYMFPSIAK-TG 332 (388)
T ss_dssp HHHHHHHHTTTCSC--CHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCC-CCBTTEECCBCGG-GT
T ss_pred HHHHHHHhhcccCC--CHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcccC-CCeeEEEEEecCC-CC
Confidence 88876655443333 4444555555553 3445567778889999999999988888743 4456677777753 12
Q ss_pred HHHHHHHHHHH-hcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 302 LYAACLLKKLE-EHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 302 ~~~~~~~~~l~-~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.+..++.++|. ++||.+.++. ..++|++++ .+++++++++++|+++++++
T Consensus 333 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 333 RSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA--TDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp CCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 36778999996 4899997753 578999995 79999999999999988765
No 18
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=2e-35 Score=261.10 Aligned_cols=317 Identities=17% Similarity=0.123 Sum_probs=241.5
Q ss_pred cccccccCCCCCC-hHHHHHHHHHcCCC--CCCccCCChHHHHHHHHHHHHhCC-C--CeEEcCCchHHHHHHHHHhhhh
Q 018243 3 TRTVDLRSDTVTK-PTEAMRAAMASAEV--DDDVLMHDPTAFRLETEMAKVMGK-E--AGLFVPSGTMGNLISVLVHCET 76 (359)
Q Consensus 3 ~~~id~~~~~~~~-~~~~~~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~~~-~--~~~~~~~gt~a~~~~l~~~~~~ 76 (359)
..+|||.++.+.. ++|.+.+++.+... ....|.. +...++++.+++++|. + ..++++||++++..++..++ +
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~-~ 107 (367)
T 3euc_A 30 HGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAA-R 107 (367)
T ss_dssp TTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHHHTC-C
T ss_pred CCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHHHHHc-C
Confidence 4579999886654 45888888877543 2334443 5678999999999998 3 34677778888888888887 5
Q ss_pred cCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCC-ceeEEEEeccccCCCceecC
Q 018243 77 RGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYP-TTRLICLENTHANCGGRCLS 155 (359)
Q Consensus 77 ~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~v~i~~~~~~ptG~~~~ 155 (359)
+|++|+++.|+|.+... .++..|.+++.++.+.++.+|+++|++.++ + ++++|+++++ +||||.+++
T Consensus 108 ~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~--------~~~~~~v~~~~~-~nptG~~~~ 175 (367)
T 3euc_A 108 PGAKVMAPVPGFVMYAM---SAQFAGLEFVGVPLRADFTLDRGAMLAAMA--------EHQPAIVYLAYP-NNPTGNLFD 175 (367)
T ss_dssp TTCEEEEEESCSCCSCH---HHHTTTCEEEEEECCTTSCCCHHHHHHHHH--------HHCCSEEEEESS-CTTTCCCCC
T ss_pred CCCEEEEcCCCHHHHHH---HHHHcCCeEEEecCCCCCCCCHHHHHHHhh--------ccCCCEEEEcCC-CCCCCCCCC
Confidence 99999999999887654 367789999999888888999999999998 5 7899999654 669999999
Q ss_pred hhhHHHHHHHHHHc--CcEEEEecccccchhhhcCchhHhhh-cCccEEEEeccccCCCcee--eEEecCHHHHHHHHHH
Q 018243 156 VEYTDSVGEIAKKH--GLKLHIDGARIFNAAVALGVPVRRLV-QAADSASVCLSKGLGAPVG--SVIVGSKEFIKKARRL 230 (359)
Q Consensus 156 ~~~l~~i~~~~~~~--~~~li~D~a~~~~~~~~~~~~~~~~~-~~~d~~~~s~~K~~g~~~g--g~~~~~~~~~~~~~~~ 230 (359)
.+++++|+++|++| |+++|+|++|..... .+ ....+. .+.++++.|+||+ +.++. |+++.++++.+.+...
T Consensus 176 ~~~l~~i~~~~~~~~~~~~li~De~~~~~~~--~~-~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~~~~~~~~~ 251 (367)
T 3euc_A 176 AADMEAIVRAAQGSVCRSLVVVDEAYQPFAQ--ES-WMSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGDPQWLEQLDKV 251 (367)
T ss_dssp HHHHHHHHHHTBTTSCBCEEEEECTTCCSSS--CC-SGGGGGTCTTEEEEEECCCT-TSCSCCEEEEEECHHHHHHHGGG
T ss_pred HHHHHHHHHhhhhcCCCcEEEEeCcchhhcc--cc-hHHHHhhCCCEEEEecchhh-cccccCceeeeeCHHHHHHHHHh
Confidence 99999999999999 999999999754221 11 111221 1233566699999 55432 8888899988876544
Q ss_pred HHhhCCCcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHH
Q 018243 231 RKTLGGGMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLL 308 (359)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (359)
... +..+...++++..+++ .+.++.+++..++++++.+.|+++|++++. +..++++|+.++ +..++.
T Consensus 252 ~~~----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~--~~~~~~~~~~~~-----~~~~l~ 320 (367)
T 3euc_A 252 RPP----YNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVF--PSAANFLLARVP-----DAAQTF 320 (367)
T ss_dssp CCS----SCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEEC--CCSSSEEEEECS-----CHHHHH
T ss_pred CCC----CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC--CCCCeEEEEECC-----CHHHHH
Confidence 332 2234555555555563 344557777888999999999999899863 457888888876 456888
Q ss_pred HHHHhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018243 309 KKLEEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 309 ~~l~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
+.|.++||.+.+++ ..++|++++ +++++++++++|+++++
T Consensus 321 ~~l~~~gi~v~~~~~~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 321 DRLLARKVLIKNVSKMHPLLANCLRVTVS---TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp HHHHTTTEECEECGGGCGGGTTEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCeEEEECCccCCCCCCEEEEecC---CHHHHHHHHHHHHHHhc
Confidence 89999999997754 468999984 89999999999998764
No 19
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=4.5e-35 Score=258.60 Aligned_cols=319 Identities=13% Similarity=0.103 Sum_probs=243.7
Q ss_pred cccccccCCCCC-ChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHHhhhhcCC
Q 018243 3 TRTVDLRSDTVT-KPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLVHCETRGS 79 (359)
Q Consensus 3 ~~~id~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~~~~~~g~ 79 (359)
..+|||.++.+. .++|.+.+++.+.......|..... .++++.+++++|.+ ..++++||++++..++..++ ++|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~-~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~~l~-~~gd 107 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQNANKAHLYPDDSM-IELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKL-NSKN 107 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHC-CTTC
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCCh-HHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHHh-CCCC
Confidence 357999977444 5669999999886554445554444 79999999999965 35777888889999888887 5999
Q ss_pred eEEecCCCcceeeccccccccCCccceeeec-CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhh
Q 018243 80 EVILGDNSHIHIYENGGISTIGGVHPRTVKN-NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEY 158 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~ 158 (359)
+|+++.|+|.+... .++..|.+++.++. +.++ +|++++++.++ +++++|+++++ +||||.++|.++
T Consensus 108 ~vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~--------~~~~~v~~~~p-~nptG~~~~~~~ 174 (365)
T 3get_A 108 AFLQAGVTFAMYEI---YAKQCGAKCYKTQSITHNL-DEFKKLYETHK--------DEIKLIFLCLP-NNPLGECLDASE 174 (365)
T ss_dssp EEEECSSCCTHHHH---HHHHHTCEEEECSSSSCCH-HHHHHHHHHTT--------TTEEEEEEESS-CTTTCCCCCHHH
T ss_pred EEEEeCCChHHHHH---HHHHcCCEEEEEecCCCCC-CCHHHHHHHhC--------CCCCEEEEcCC-CCCCCCCcCHHH
Confidence 99999999887654 36778889999987 5677 99999999998 78999999655 569999999888
Q ss_pred HHHHHHHHHHcCcEEEEecccccchh---hhcCchhHhhh--cCccEEEEeccccCCCce-e-eEEecCHHHHHHHHHHH
Q 018243 159 TDSVGEIAKKHGLKLHIDGARIFNAA---VALGVPVRRLV--QAADSASVCLSKGLGAPV-G-SVIVGSKEFIKKARRLR 231 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a~~~~~~---~~~~~~~~~~~--~~~d~~~~s~~K~~g~~~-g-g~~~~~~~~~~~~~~~~ 231 (359)
+.+|+++| ++|+++|+|++|+.+.+ .....+..... .+.++++.|+||++|.++ + |+++.++++.+.++...
T Consensus 175 l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 253 (365)
T 3get_A 175 ATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKLR 253 (365)
T ss_dssp HHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHHS
T ss_pred HHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHHHHHHHHhc
Confidence 88888888 67999999999865442 11112222221 234466679999997543 2 88888999999887665
Q ss_pred HhhCCCcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHH
Q 018243 232 KTLGGGMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLK 309 (359)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (359)
..++ .+...++++..+++ .+.++.++++.++++++.+.|+++ ++++. +..++++|+.++.. +..++.+
T Consensus 254 ~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~--~~~~~~~~~~~~~~---~~~~~~~ 323 (365)
T 3get_A 254 APFN----VSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH-NIKII--DSYTNFITYFFDEK---NSTDLSE 323 (365)
T ss_dssp CTTC----SCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEC--CCSSSEEEEECSSS---CHHHHHH
T ss_pred CCCC----cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEC--CCCCeEEEEECCCC---CHHHHHH
Confidence 5433 34455555555553 345557777888999999999999 88874 34678899998762 6788999
Q ss_pred HHHhcCceeccCC---CcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 310 KLEEHGVLVMPES---STRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 310 ~l~~~gi~~~~~~---~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
.|.++||.+.++. ..++|++++ +++++++++++|++++
T Consensus 324 ~l~~~gi~v~~g~~~~~~~iRis~~---~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 324 KLLKKGIIIRNLKSYGLNAIRITIG---TSYENEKFFTEFDKIL 364 (365)
T ss_dssp HHHTTTEECEECGGGTCSEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred HHHHCCEEEEECccCCCCEEEEEcC---CHHHHHHHHHHHHHHh
Confidence 9988999998876 689999984 8999999999998876
No 20
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=4.6e-35 Score=262.40 Aligned_cols=324 Identities=16% Similarity=0.177 Sum_probs=244.9
Q ss_pred cccccccCCCCCC--hHHHHHHHHHcCCCC--------CCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHH
Q 018243 3 TRTVDLRSDTVTK--PTEAMRAAMASAEVD--------DDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~~~~--~~~~~~~a~~~~~~~--------~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~ 72 (359)
.+++||.++++.. ++|.+.+++.+.... ...++..+...++++.++++++.+..+++++|++++..++.+
T Consensus 59 ~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~l~~ 138 (409)
T 3kki_A 59 PDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFDECLLSQSGWNANVGLLQT 138 (409)
T ss_dssp TTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCSEEEEESCHHHHHHHHHHH
T ss_pred CceEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCCCeEEEecchHHHHHHHHHH
Confidence 3578999987542 347777777664322 112344566789999999999999899999999999999998
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018243 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
++ ++||.|++++++|.+... + ....|.+++.++. .|+++|++.+++ .++++|++++ ++||||.
T Consensus 139 ~~-~~gd~Vl~~~~~~~~~~~-~--~~~~g~~~~~~~~-----~d~~~le~~l~~-------~~~~~vi~~~-~~nptG~ 201 (409)
T 3kki_A 139 IC-QPNTNVYIDFFAHMSLWE-G--ARYANAQAHPFMH-----NNCDHLRMLIQR-------HGPGIIVVDS-IYSTLGT 201 (409)
T ss_dssp HC-CTTCEEEEETTSCHHHHH-H--HHHTTCEEEEECT-----TCHHHHHHHHHH-------HCSCEEEEES-BCTTTCC
T ss_pred hc-CCCCEEEECCCcCHHHHH-H--HHHcCCeEEEecC-----CCHHHHHHHHHh-------cCCeEEEECC-CCCCCCC
Confidence 88 599999999999988765 3 6677888887765 389999999983 3478888865 5559999
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHh---hhcCccEEEEeccccCCCceeeEEecCHHHHHHHHH
Q 018243 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRR---LVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARR 229 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~---~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~ 229 (359)
+.+ +++|+++|++||++||+||+|+.+.+...+..... .....|+++.|+||+++++ ||++++++++++.+..
T Consensus 202 ~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~-gg~v~~~~~~~~~~~~ 277 (409)
T 3kki_A 202 IAP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYR-AGAIWCNNEVNRCVPF 277 (409)
T ss_dssp BCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS-CEEEEESSSGGGTHHH
T ss_pred cCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCC-ceEEEECHHHHHHHHH
Confidence 988 89999999999999999999876555433333222 2235678888999999975 7889998888877665
Q ss_pred HHHhhCCCcchhHHHHHHHHHHHHHhH--HHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHH
Q 018243 230 LRKTLGGGMRQVGVLCAAALVALQENV--LVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACL 307 (359)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (359)
....+..+...++..++++..+++... ++.++++.++++++.+.|+++ ++++. ..++++++.++.. .+..++
T Consensus 278 ~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~---~~~~~~~~~~~~~--~~~~~~ 351 (409)
T 3kki_A 278 ISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQL-GLTIR---SESQIIGLETGDE--RNTEKV 351 (409)
T ss_dssp HCHHHHHSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT-TCCCC---CSSSEEEEEEESH--HHHHHH
T ss_pred hCcCccccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCccC---CCCCEEEEEeCCH--HHHHHH
Confidence 433322222234455555555554321 346677888999999999998 87763 3788888888752 367789
Q ss_pred HHHHHhcCceec-------cCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 308 LKKLEEHGVLVM-------PESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 308 ~~~l~~~gi~~~-------~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.+.|.++||.+. +.+..++|++++..++++++++++++|+++++..
T Consensus 352 ~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 404 (409)
T 3kki_A 352 RDYLESNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNYG 404 (409)
T ss_dssp HHHHHHTTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhcC
Confidence 999988899984 3346789999988899999999999999998754
No 21
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=6.2e-35 Score=262.73 Aligned_cols=332 Identities=15% Similarity=0.082 Sum_probs=246.5
Q ss_pred ccccccCCCCC-----ChHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhC-----C--CCeEEcCCchHHHHHH
Q 018243 4 RTVDLRSDTVT-----KPTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMG-----K--EAGLFVPSGTMGNLIS 69 (359)
Q Consensus 4 ~~id~~~~~~~-----~~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~-----~--~~~~~~~~gt~a~~~~ 69 (359)
.+|||..+.+. .+++.+++++.+.... ...|...++..++++.++++++ . +..++++||++|+..+
T Consensus 55 ~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~ 134 (427)
T 3dyd_A 55 TMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLC 134 (427)
T ss_dssp CCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHHHHH
T ss_pred CEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHHHHH
Confidence 46999988754 5568888888775433 2357667788999999999998 2 2347788889999999
Q ss_pred HHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEecccc
Q 018243 70 VLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHA 147 (359)
Q Consensus 70 l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~ 147 (359)
+..++ ++|++|+++.|+|..... .+...|.+++.++.+ .++.+|++++++.++ +++++|++.++ +
T Consensus 135 ~~~l~-~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--------~~~~~v~i~~p-~ 201 (427)
T 3dyd_A 135 LAVLA-NPGQNILVPRPGFSLYKT---LAESMGIEVKLYNLLPEKSWEIDLKQLEYLID--------EKTACLIVNNP-S 201 (427)
T ss_dssp HHHHC-CTTCEEEEEESCCTHHHH---HHHHTTCEEEEEEEEGGGTTEECHHHHHSSCC--------TTEEEEEEESS-C
T ss_pred HHHhc-CCCCEEEEcCCCchhHHH---HHHHcCCEEEEEecccccCCCCCHHHHHHHhc--------cCCCEEEEECC-C
Confidence 99988 599999999999876543 377788898888654 456789999999988 67888888776 6
Q ss_pred CCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhcCccEEE-EeccccCCCcee--eEEecC---
Q 018243 148 NCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQAADSAS-VCLSKGLGAPVG--SVIVGS--- 220 (359)
Q Consensus 148 ~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~~~d~~~-~s~~K~~g~~~g--g~~~~~--- 220 (359)
||||..++.+++++|+++|+++|+++|+|++|..+.+... ..+...+....++++ .|+||.|++++. |+++++
T Consensus 202 nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~ 281 (427)
T 3dyd_A 202 NPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRR 281 (427)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECST
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcc
Confidence 6999999999999999999999999999999765433211 112333333344454 499999876542 666664
Q ss_pred ----HHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEE
Q 018243 221 ----KEFIKKARRLRKTLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIV 292 (359)
Q Consensus 221 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~ 292 (359)
+++.+.+....... .+ .+...++++...++ .+.++.++++.++++++.+.|+++|++.+.. +..++++
T Consensus 282 ~~~~~~i~~~l~~~~~~~-~~--~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-p~~g~~~ 357 (427)
T 3dyd_A 282 DIFGNEIRDGLVKLSQRI-LG--PCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVR-PSGAMYL 357 (427)
T ss_dssp TSSHHHHHHHHHHHHHHH-CC--SCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEEC-CSBTTEE
T ss_pred hhhHHHHHHHHHHHHhcc-CC--CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecC-CCeeEEE
Confidence 46777766554332 22 23344444444443 3445577778889999999999998998743 4578899
Q ss_pred EEEeccc---hHHHHHHHHHHH-HhcCceeccC----CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 293 YFEITED---SKLYAACLLKKL-EEHGVLVMPE----SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 293 ~~~~~~~---~~~~~~~~~~~l-~~~gi~~~~~----~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
|+.++.. .+.+..++.++| +++||.+.++ ..+++|+++. .+++++++++++|.++++++.
T Consensus 358 ~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~~~~ 425 (427)
T 3dyd_A 358 MVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVIT--VPEVMMLEACSRIQEFCEQHY 425 (427)
T ss_dssp EEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESC--SCHHHHHHHHHHHHHHHHHHC
T ss_pred EEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEEC--CCHHHHHHHHHHHHHHHHHhh
Confidence 9888631 113567888888 6899999776 3578999984 899999999999999998764
No 22
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=3.1e-34 Score=255.19 Aligned_cols=328 Identities=15% Similarity=0.156 Sum_probs=245.4
Q ss_pred ccccCCCCCChHHHHHHHHHcCCCCCCccCC--ChHHHHHHHHHHHHhCCC--C-eEEcCCchHHHHHHHHHhhhhcCCe
Q 018243 6 VDLRSDTVTKPTEAMRAAMASAEVDDDVLMH--DPTAFRLETEMAKVMGKE--A-GLFVPSGTMGNLISVLVHCETRGSE 80 (359)
Q Consensus 6 id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~~--~-~~~~~~gt~a~~~~l~~~~~~~g~~ 80 (359)
+.|....+..+++.+.+++.+.... .|+. .+...++++.+++++|.+ . .++++||++|+..++.+++ ++|++
T Consensus 21 ~~l~~~~~~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~-~~gd~ 97 (386)
T 2dr1_A 21 YKLFTAGPVACFPEVLEIMKVQMFS--HRSKEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGV-SKGGK 97 (386)
T ss_dssp SEECCSSSCCCCHHHHHHTTSCCCC--TTSHHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHS-CTTCE
T ss_pred ceeecCCCcCCcHHHHHHHhccccc--ccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhh-cCCCe
Confidence 3445555666678999999886543 2322 355688889999999987 3 3677888999999999887 59999
Q ss_pred EEecCCCccee-eccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhH
Q 018243 81 VILGDNSHIHI-YENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYT 159 (359)
Q Consensus 81 vl~~~~~~~~~-~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l 159 (359)
|++++++|.+. +. ..+...|++++.++.+.++.+|+++|++.+++. +++++|+++ .++||||.+.+ +
T Consensus 98 vl~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~------~~~~~v~~~-~~~nptG~~~~---l 165 (386)
T 2dr1_A 98 VLVTIIGAFGKRYK--EVVESNGRKAVVLEYEPGKAVKPEDLDDALRKN------PDVEAVTIT-YNETSTGVLNP---L 165 (386)
T ss_dssp EEEEESSHHHHHHH--HHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHC------TTCCEEEEE-SEETTTTEECC---H
T ss_pred EEEEcCCchhHHHH--HHHHHhCCceEEEecCCCCCCCHHHHHHHHhcC------CCCcEEEEE-eecCCcchhCC---H
Confidence 99999998762 33 336778989999988878889999999999521 578899996 45569999987 8
Q ss_pred HHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHH----------
Q 018243 160 DSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKAR---------- 228 (359)
Q Consensus 160 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~---------- 228 (359)
++|.++|++||+++|+|++|+++... .+...+ +.|+++.|+||++++|.| |++++++++.+.++
T Consensus 166 ~~i~~l~~~~~~~li~D~a~~~~~~~---~~~~~~--~~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~ 240 (386)
T 2dr1_A 166 PELAKVAKEHDKLVFVDAVSAMGGAD---IKFDKW--GLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYFD 240 (386)
T ss_dssp HHHHHHHHHTTCEEEEECTTTBTTBC---CCTTTT--TCSEEEEETTSTTCCCSSCEEEEECHHHHHHHTTCTTCCSTTC
T ss_pred HHHHHHHHHcCCeEEEEccccccCcc---cccccc--CCcEEEEeccccccCCCceEEEEECHHHHHHHhcCCCCceEEe
Confidence 99999999999999999998765432 222222 678999999999998766 89999998887652
Q ss_pred ------HHH-HhhCCCcchhHHHHHHHHHHHHH-----hHHHHhhhHHHHHHHHHHHHhcCCCceEecCCc--cceEEEE
Q 018243 229 ------RLR-KTLGGGMRQVGVLCAAALVALQE-----NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV--ETNIVYF 294 (359)
Q Consensus 229 ------~~~-~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~--~~~~~~~ 294 (359)
... ... .....+...++++..+++. ..++.++++.++++++.+.|+++ ++++..+.. .++++++
T Consensus 241 ~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 318 (386)
T 2dr1_A 241 IPLYVKYLKEKES-TPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GLDILAEPGHESPTITAV 318 (386)
T ss_dssp HHHHHHHHHHHSS-CSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCTTCBCSSEEEE
T ss_pred HHHHHHhhccCCC-CCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCeeCcCccccCCceEEE
Confidence 111 111 1112233444444444432 24457778889999999999998 887643321 4678888
Q ss_pred EeccchHHHHHHHHHHHHhcCceeccC----CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhhc
Q 018243 295 EITEDSKLYAACLLKKLEEHGVLVMPE----SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCEEN 357 (359)
Q Consensus 295 ~~~~~~~~~~~~~~~~l~~~gi~~~~~----~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 357 (359)
.++. +.+..++.++|.++||.+.++ ...++|++++..++++++++++++|+++++++..+.
T Consensus 319 ~~~~--~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 383 (386)
T 2dr1_A 319 LTPP--GIKGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELKKQK 383 (386)
T ss_dssp ECCT--TCCHHHHHHHHHHTTEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCC--CCCHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcCCCC
Confidence 8863 246788999998889999775 356899999877899999999999999999886543
No 23
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=1.6e-34 Score=256.87 Aligned_cols=322 Identities=14% Similarity=0.141 Sum_probs=241.5
Q ss_pred ccccccCCCC-C-ChHHHHHHHHHcCCCC------CCc--cCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHh
Q 018243 4 RTVDLRSDTV-T-KPTEAMRAAMASAEVD------DDV--LMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~-~-~~~~~~~~a~~~~~~~------~~~--~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~ 73 (359)
.+|||.++.+ . .++|.+.+++.+.... ... ++..+...++++.+++++|.+..+++++|++++..++..+
T Consensus 40 ~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~~~~~ 119 (384)
T 1bs0_A 40 QYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAM 119 (384)
T ss_dssp EEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHH
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHh
Confidence 5789999764 4 3558888888664321 111 2456888999999999999988899999999999998887
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee
Q 018243 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC 153 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~ 153 (359)
. ++|+.|+++.++|.+... .+...|.+++.++. .|+++|++.+++.. +++++|++ ++++||||.+
T Consensus 120 ~-~~gd~v~~~~~~~~~~~~---~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~-----~~~~~v~~-~~~~nptG~~ 184 (384)
T 1bs0_A 120 M-AKEDRIAADRLSHASLLE---AASLSPSQLRRFAH-----NDVTHLARLLASPC-----PGQQMVVT-EGVFSMDGDS 184 (384)
T ss_dssp C-CTTCEEEEETTCCHHHHH---HHHTSSSEEEEECT-----TCHHHHHHHHHSCC-----SSCEEEEE-ESBCTTTCCB
T ss_pred C-CCCcEEEEcccccHHHHH---HHHHcCCCEEEeCC-----CCHHHHHHHHHhcC-----CCCeEEEE-eCCCCCCCCc
Confidence 7 599999999999887664 26667888888874 38999999998421 13677777 4455699999
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh-HhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHH
Q 018243 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV-RRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRK 232 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~ 232 (359)
++ +++|.++|++||+++|+|++|+.+.....+... ..+....|+++.|+||+++ +.||++++++++++.++....
T Consensus 185 ~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~~~~~~l~~~~~ 260 (384)
T 1bs0_A 185 AP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFG-VSGAAVLCSSTVADYLLQFAR 260 (384)
T ss_dssp CC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTS-SCCEEEEECHHHHHHHHHHCH
T ss_pred cC---HHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhh-ccCcEEEeCHHHHHHHHHhch
Confidence 98 799999999999999999998665432222222 2222357888889999999 466889899999888776533
Q ss_pred hhCCCcchhHHHHHHHHHHHHH----hHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHH
Q 018243 233 TLGGGMRQVGVLCAAALVALQE----NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLL 308 (359)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (359)
.+..+...++..++++..+++. ..++.++++.++++++.+.|+++ ++++. +..++++++.++. +.+..++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~--~~~~~~l~ 335 (384)
T 1bs0_A 261 HLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFTLA--DSCSAIQPLIVGD--NSRALQLA 335 (384)
T ss_dssp HHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEEC--SCCSSBCCEEEES--HHHHHHHH
T ss_pred hhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCccc--CCCCCEEEEEeCC--HHHHHHHH
Confidence 3322223345555555555543 33447778889999999999998 88764 3467788888764 35788999
Q ss_pred HHHHhcCceeccCC-------CcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018243 309 KKLEEHGVLVMPES-------STRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 309 ~~l~~~gi~~~~~~-------~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
++|.++||.+.++. ..++|++++..++++++++++++|+++
T Consensus 336 ~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 336 EKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp HHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 99988899997643 368999998778999999999999864
No 24
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=7.3e-35 Score=258.28 Aligned_cols=325 Identities=18% Similarity=0.148 Sum_probs=243.6
Q ss_pred ccccccCCCCCC-hHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHh----CCC-----CeEEcCCchHHHHHHHH
Q 018243 4 RTVDLRSDTVTK-PTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVM----GKE-----AGLFVPSGTMGNLISVL 71 (359)
Q Consensus 4 ~~id~~~~~~~~-~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~----~~~-----~~~~~~~gt~a~~~~l~ 71 (359)
.+|||.++.+.. ++|.+.+++.+.... ...|+..++..++++.+++++ |.+ ..++++||++++..++.
T Consensus 26 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~ 105 (376)
T 2dou_A 26 GLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLL 105 (376)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHH
T ss_pred CEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHH
Confidence 579999987654 458899999876543 233544457889999999988 874 34667777888888888
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018243 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
++. ++|++|+++.|+|.+... .+...|.+++.++.++++.+|++++++.++ +++++|++++ ++||||
T Consensus 106 ~l~-~~gd~vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~--------~~~~~v~l~~-p~nptG 172 (376)
T 2dou_A 106 ALT-EPEDLLLLPEVAYPSYFG---AARVASLRTFLIPLREDGLADLKAVPEGVW--------REAKVLLLNY-PNNPTG 172 (376)
T ss_dssp HHC-CTTCEEEEESSCCHHHHH---HHHHTTCEEEEECBCTTSSBCGGGSCHHHH--------HHEEEEEECS-SCTTTC
T ss_pred Hhc-CCCCEEEECCCCcHhHHH---HHHHcCCEEEEeeCCCCCCCCHHHHHHhhc--------cCceEEEECC-CCCCcC
Confidence 887 589999999999887654 366778899988874455689999999987 6889999965 467999
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh--cCccEEEEeccccCCCce--eeEEecCHHHHHHH
Q 018243 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV--QAADSASVCLSKGLGAPV--GSVIVGSKEFIKKA 227 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d~~~~s~~K~~g~~~--gg~~~~~~~~~~~~ 227 (359)
.++|.+++++|+++|++||+++|+|++|..+.......+...+. .+.++++.|+||++|.++ .|++++++++++.+
T Consensus 173 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l 252 (376)
T 2dou_A 173 AVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARL 252 (376)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHH
Confidence 99999999999999999999999999986544321111222221 134466679999998543 28888999999998
Q ss_pred HHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHH
Q 018243 228 RRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYA 304 (359)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (359)
+......+.+. +...++++..+++ .+.++.++++.++++++.+.|+++ +.+. ++..+.++|+.++.. .+.
T Consensus 253 ~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~-~~~~~~~~~~~~~~~--~~~ 325 (376)
T 2dou_A 253 ERVKGVIDFNQ--YAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV--LSLL-PPRATMYLWGRLPEG--VDD 325 (376)
T ss_dssp HHHHHHHCCCS--CHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SEEC-CCCBSSEEEEECCTT--CCH
T ss_pred HHHHHhcccCC--CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cCcc-CCCeeEEEEEECCCC--CCH
Confidence 87766555444 3344455555553 345556677888899999999887 6653 344677899988742 356
Q ss_pred HHHHHHHHhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 305 ACLLKKLEEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 305 ~~~~~~l~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
.++.++|.++||.+.++. ..++|++++ .+++++++++++|++++
T Consensus 326 ~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~--~~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 326 LEFGLRLVERGVALAPGRGFGPGGKGFVRIALV--RPLEELLEAAKRIREAL 375 (376)
T ss_dssp HHHHHHHHHTTEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCEEEcCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHh
Confidence 789999988899997652 578999996 48999999999998765
No 25
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=3.6e-35 Score=265.48 Aligned_cols=331 Identities=13% Similarity=0.054 Sum_probs=247.4
Q ss_pred cccccccCCCCCCh-HHHHHHHHHcCCC-CC-CccCCChHHHHHHHHHHHHhC--------CCCeEEcCCchHHHHHHHH
Q 018243 3 TRTVDLRSDTVTKP-TEAMRAAMASAEV-DD-DVLMHDPTAFRLETEMAKVMG--------KEAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~~~~~~-~~~~~~a~~~~~~-~~-~~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~~~~l~ 71 (359)
..+|||.++.+..+ +|.+.+++.+... .. ..|....+..++++.++++++ .+..++++||++++..++.
T Consensus 44 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~ 123 (437)
T 3g0t_A 44 TKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFL 123 (437)
T ss_dssp CCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHH
T ss_pred CCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHH
Confidence 45799998866544 5888888877544 22 346555566899999999987 2234777778888888888
Q ss_pred Hhhh-hcCC--eEEecCCCcceeeccccccccCCccceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEecccc
Q 018243 72 VHCE-TRGS--EVILGDNSHIHIYENGGISTIGGVHPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHA 147 (359)
Q Consensus 72 ~~~~-~~g~--~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~ 147 (359)
.++. ++|+ +|+++.|+|.+... .+...|.+++.++.+ +++.+|+++|++.+++ +++++|+++++ +
T Consensus 124 ~l~~~~~gd~~~Vl~~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-------~~~~~v~l~~p-~ 192 (437)
T 3g0t_A 124 VANRTHKNREYGTLFIDPGFNLNKL---QCRILGQKFESFDLFEYRGEKLREKLESYLQT-------GQFCSIIYSNP-N 192 (437)
T ss_dssp HHTTSCTTCSCCEEEEESCCHHHHH---HHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTT-------TCCCEEEEESS-C
T ss_pred HHhcCCCCCccEEEEeCCCcHhHHH---HHHHcCCEEEEEeecCCCCccCHHHHHHHHhc-------CCceEEEEeCC-C
Confidence 8761 3899 99999999887654 366788899999875 4456899999999943 68899988666 6
Q ss_pred CCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh-------Hhhh--cCccEEEEeccccCCCce-e-eE
Q 018243 148 NCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV-------RRLV--QAADSASVCLSKGLGAPV-G-SV 216 (359)
Q Consensus 148 ~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-------~~~~--~~~d~~~~s~~K~~g~~~-g-g~ 216 (359)
||||.+++.+++++|+++|++||+++|+|++|+.+.+. ...+. ..+. .+.++++.|+||++|.++ + |+
T Consensus 193 nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 271 (437)
T 3g0t_A 193 NPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFR-KDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGV 271 (437)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTT-SCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEE
T ss_pred CCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccC-CCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEE
Confidence 79999999999999999999999999999998654433 11122 2221 234466779999998543 2 88
Q ss_pred EecCHHHHH-H-----------------HHHHHHhhCCCcchhHHHHHHHHHHHHH---h---HHHHhhhHHHHHHHHHH
Q 018243 217 IVGSKEFIK-K-----------------ARRLRKTLGGGMRQVGVLCAAALVALQE---N---VLVMLDGDHKKAKLLAE 272 (359)
Q Consensus 217 ~~~~~~~~~-~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~---~~~~~~~~~~~~~~l~~ 272 (359)
+++++++++ . +.........+. +...+.++...++. + .+..++++.++++++.+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 349 (437)
T 3g0t_A 272 LMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGA--THSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKK 349 (437)
T ss_dssp EEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSS--CHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHH
T ss_pred EEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCC--CHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888 6 555444333333 33444444444432 2 55577888899999999
Q ss_pred HHhcCCCceEe------cCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCC------cEEEEEeCCCCCHHHHH
Q 018243 273 GLNQLKGLRVD------VDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESS------TRVRIVVHHQISANDVH 340 (359)
Q Consensus 273 ~l~~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~------~~lRi~~~~~~~~~~i~ 340 (359)
.|+++ |+++. .++..++++|+.++. .+..++.+.|.++||.+.++.. .++|++++ ..++++++
T Consensus 350 ~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~e~i~ 424 (437)
T 3g0t_A 350 MFLDN-GFNIVYDKDGNEPLADGFYFTVGYKG---MDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTS-LLPESQFP 424 (437)
T ss_dssp HHHTT-TEEESSCEETTEECCSSSEEEEEETT---CCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECS-SSCGGGHH
T ss_pred HHHHc-CCEEeccccCCCCCceeEEEEEecCC---CCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEe-cCCHHHHH
Confidence 99999 88875 243578899999873 4788999999889999977642 67999998 45999999
Q ss_pred HHHHHHHHHHHH
Q 018243 341 YTLSCFQKIYAG 352 (359)
Q Consensus 341 ~~~~~l~~~~~~ 352 (359)
+++++|++++++
T Consensus 425 ~~~~~l~~~~~~ 436 (437)
T 3g0t_A 425 DLEKRLQMLNAE 436 (437)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999988753
No 26
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=7e-35 Score=262.27 Aligned_cols=330 Identities=14% Similarity=0.134 Sum_probs=245.4
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCC--------CCccCC--ChHHHHHHHHHHHHhCC---CCeEEcCCchHHHHHHHH
Q 018243 5 TVDLRSDTVTKPTEAMRAAMASAEVD--------DDVLMH--DPTAFRLETEMAKVMGK---EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~--------~~~~~~--~~~~~~l~~~la~~~~~---~~~~~~~~gt~a~~~~l~ 71 (359)
+++|.++.+..+++.+.+++.+.... ...|+. .+...++++.++++++. +..++++||++|+..++.
T Consensus 29 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~ 108 (420)
T 1t3i_A 29 LVYLDNAATSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAY 108 (420)
T ss_dssp CEECBTTTCCCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHH
Confidence 68999887776668888888764321 112332 35678999999999998 456888889999999999
Q ss_pred Hh----hhhcCCeEEecCCCcceeecc-ccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018243 72 VH----CETRGSEVILGDNSHIHIYEN-GGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 72 ~~----~~~~g~~vl~~~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
.+ . ++|++|+++.++|.+.... ...+...|.+++.++.+.++.+|+++|++.++ +++++|++++ +
T Consensus 109 ~~~~~~~-~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~-~ 178 (420)
T 1t3i_A 109 SWGMNNL-KAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLS--------EKTKLVTVVH-I 178 (420)
T ss_dssp HTHHHHC-CTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCC--------TTEEEEEEES-B
T ss_pred Hhhhccc-CCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhC--------CCceEEEEeC-C
Confidence 98 5 5899999999999885310 02355678899999888888899999999998 6889998855 5
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHH
Q 018243 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKK 226 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~ 226 (359)
+||||.+++ +++|.++|++||+++|+|++|+++... .....+ +.|+++.|+||.+|++++|+++.++++.+.
T Consensus 179 ~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~---~~~~~~--~~di~~~s~sK~~~~~g~G~~~~~~~~~~~ 250 (420)
T 1t3i_A 179 SNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHYP---LDVQLI--DCDWLVASGHKMCAPTGIGFLYGKEEILEA 250 (420)
T ss_dssp CTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC---CCHHHH--TCSEEEEEGGGTTSCTTCEEEEECHHHHHH
T ss_pred cccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCcc---Cchhhc--CCCEEEEehhhhcCCCceEEEEEchHHHhh
Confidence 569999998 899999999999999999998765432 123333 589999999997775444899999988877
Q ss_pred HHHHHHhhC------------------CCcchhHHHHHHHHH-HH---HH-hHHHHhhhHHHHHHHHHHHHhcCCCceEe
Q 018243 227 ARRLRKTLG------------------GGMRQVGVLCAAALV-AL---QE-NVLVMLDGDHKKAKLLAEGLNQLKGLRVD 283 (359)
Q Consensus 227 ~~~~~~~~~------------------~~~~~~~~~~~~~~~-~l---~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~~~ 283 (359)
++......+ .....++..+.++.. ++ +. ..+...++..++++++.+.|+++|++++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 330 (420)
T 1t3i_A 251 MPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLY 330 (420)
T ss_dssp SCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred cCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Confidence 643322110 001122233333222 23 22 34446777888999999999998899876
Q ss_pred cCC----ccceEEEEEeccchHHHHHHHHHHHHhcCceeccC-----------C-CcEEEEEeCCCCCHHHHHHHHHHHH
Q 018243 284 VDA----VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE-----------S-STRVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 284 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~-----------~-~~~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
.+. ..++++++.++. .+..++.+.|.++||.+.++ + ..++|++++..++++++++++++|+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~ 407 (420)
T 1t3i_A 331 GPNPKHGDRAALASFNVAG---LHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQ 407 (420)
T ss_dssp SCCGGGSCBCSEEEEEETT---BCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHH
T ss_pred CCCccccccCCEEEEEECC---CCHHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHH
Confidence 443 137777777764 35678889999999999876 2 6789999987789999999999999
Q ss_pred HHHHHHHh
Q 018243 348 KIYAGVCE 355 (359)
Q Consensus 348 ~~~~~~~~ 355 (359)
++++++++
T Consensus 408 ~~~~~~~~ 415 (420)
T 1t3i_A 408 ATIRFFSD 415 (420)
T ss_dssp HHHHHTC-
T ss_pred HHHHHhcC
Confidence 99987744
No 27
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=2.1e-34 Score=257.35 Aligned_cols=328 Identities=16% Similarity=0.184 Sum_probs=244.7
Q ss_pred ccccccCCCC-CC-hHHHHHHHHHcCCCC----CC----ccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHh
Q 018243 4 RTVDLRSDTV-TK-PTEAMRAAMASAEVD----DD----VLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~-~~-~~~~~~~a~~~~~~~----~~----~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~ 73 (359)
.+|||.++.+ .. +++.+.+++.+.... .. ..+..+...++++.+++++|.+..++++||++|+..++..+
T Consensus 44 ~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~v~~~~ggt~a~~~~~~~~ 123 (398)
T 3a2b_A 44 RVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGKEAAILFSTGFQSNLGPLSCL 123 (398)
T ss_dssp EEEECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHS
T ss_pred eEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHH
Confidence 5789999876 44 557888877664321 11 12335667899999999999988899999999999999998
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee
Q 018243 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC 153 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~ 153 (359)
+ ++|+.|++++|+|.+... .+...|.+++.++. +|+++|++.+++..+ .++++|+++++ +||||.+
T Consensus 124 ~-~~gd~V~~~~p~~~~~~~---~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~----~~~~~v~~~~~-~nptG~~ 189 (398)
T 3a2b_A 124 M-GRNDYILLDERDHASIID---GSRLSFSKVIKYGH-----NNMEDLRAKLSRLPE----DSAKLICTDGI-FSMEGDI 189 (398)
T ss_dssp S-CTTCEEEEETTCCHHHHH---HHHHSSSEEEEECT-----TCHHHHHHHHHTSCS----SSCEEEEEESB-CTTTCCB
T ss_pred h-CCCCEEEECCccCHHHHH---HHHHcCCceEEeCC-----CCHHHHHHHHHhhcc----CCceEEEEeCC-CCCCCCc
Confidence 7 599999999999988664 36778889888875 489999999984210 16888888665 5699999
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh---cCccEEEEeccccCCCceeeEEecCHHHHHHHHHH
Q 018243 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV---QAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRL 230 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~ 230 (359)
.+ +++|.++|++||+++|+|++|+.+.+...+.+..... ..+|+++.|+||+++ +.||++++++++++.+...
T Consensus 190 ~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~~~~~~l~~~ 265 (398)
T 3a2b_A 190 VN---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLA-SLGGFVAGDADVIDFLKHN 265 (398)
T ss_dssp CC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC-SSCEEEEECHHHHHHHHHH
T ss_pred cC---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEeccccccc-CCCcEEEeCHHHHHHHHHh
Confidence 87 8999999999999999999987654422233332221 235888889999999 4558899999998888764
Q ss_pred HHhhCCCcchhHHHHHHHHHHHHHh--HHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHH
Q 018243 231 RKTLGGGMRQVGVLCAAALVALQEN--VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLL 308 (359)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (359)
...+..+...++...+++..+++.. .++.++++.++++++.+.|+++ |+++.. ..++++|+.++. +.+..++.
T Consensus 266 ~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~g~~~~~~~~~--~~~~~~l~ 340 (398)
T 3a2b_A 266 ARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDH-GFDLGA--TESPILPIFIRS--NEKTFWVT 340 (398)
T ss_dssp CHHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHT-TCCBCS--CCSSEEEEECCC--HHHHHHHH
T ss_pred cccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhc-CCCcCC--CCCCEEEEEcCC--HHHHHHHH
Confidence 2222222222333333344444332 2246677888999999999998 887643 357889998864 35788999
Q ss_pred HHHHhcCceeccCC-------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 309 KKLEEHGVLVMPES-------STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 309 ~~l~~~gi~~~~~~-------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+.|.++||.+.++. ..++|++++..++++++++++++|+++++++.
T Consensus 341 ~~l~~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~~ 393 (398)
T 3a2b_A 341 KMLQDDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQAE 393 (398)
T ss_dssp HHHHHTTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHhC
Confidence 99988899997763 36799999877899999999999999988764
No 28
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=1.2e-34 Score=259.57 Aligned_cols=333 Identities=21% Similarity=0.194 Sum_probs=242.8
Q ss_pred ccccccCCCCC---ChHHHHHHHHHcCCCC----CCccCCChHHHHHHHHHHHHh----CC----CCeEEcCCchHHHHH
Q 018243 4 RTVDLRSDTVT---KPTEAMRAAMASAEVD----DDVLMHDPTAFRLETEMAKVM----GK----EAGLFVPSGTMGNLI 68 (359)
Q Consensus 4 ~~id~~~~~~~---~~~~~~~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~----~~----~~~~~~~~gt~a~~~ 68 (359)
.+|||.++.+. .|++.+.+++.+.... .. |+..++..++++.+++++ |. +..++++||++|+..
T Consensus 35 ~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~ 113 (407)
T 2zc0_A 35 KLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDL 113 (407)
T ss_dssp CCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHH
T ss_pred ceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHH
Confidence 57999887543 3668888877664322 23 666667899999999998 73 234666777899999
Q ss_pred HHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhc----CCCCCccCCceeEEEEec
Q 018243 69 SVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIR----DPKGEIVYPTTRLICLEN 144 (359)
Q Consensus 69 ~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~----~~~~~~~~~~~~~v~i~~ 144 (359)
++..++ ++|++|+++.|+|.+... .+...|.+++.++.+.++ +|+++|++.++ +. .++++|++.+
T Consensus 114 ~~~~~~-~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~------~~~~~v~~~~ 182 (407)
T 2zc0_A 114 LGRVLI-DPGDVVITENPSYINTLL---AFEQLGAKIEGVPVDNDG-MRVDLLEEKIKELKAKG------QKVKLIYTIP 182 (407)
T ss_dssp HHHHHC-CTTCEEEEEESCCHHHHH---HHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTT------CCEEEEEECC
T ss_pred HHHHhc-CCCCEEEEeCCChHHHHH---HHHHcCCEEEEcccCCCC-CCHHHHHHHHHhhhccc------CCceEEEECC
Confidence 999887 589999999999887654 367788899888776554 89999999987 31 3678886557
Q ss_pred cccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcC-chhHhhhc-CccEEEEeccccCCCce--eeEEecC
Q 018243 145 THANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALG-VPVRRLVQ-AADSASVCLSKGLGAPV--GSVIVGS 220 (359)
Q Consensus 145 ~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~-~~d~~~~s~~K~~g~~~--gg~~~~~ 220 (359)
.++||||.++|.+++++|+++|++||+++|+|++|..+...... .+...+.. +.++++.|+||+++ ++ .|+++++
T Consensus 183 ~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~ 261 (407)
T 2zc0_A 183 TGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAE 261 (407)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-TTSCCEEEECC
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccC-CCcceEEEecC
Confidence 77889999999999999999999999999999997654332111 12333321 22355669999999 43 3889999
Q ss_pred HHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHH------hHHHHhhhHHHHHHHHHHHHhc-CCCceEecCCccceEEE
Q 018243 221 KEFIKKARRLRKTLGGGMRQVGVLCAAALVALQE------NVLVMLDGDHKKAKLLAEGLNQ-LKGLRVDVDAVETNIVY 293 (359)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~~~~~~~ 293 (359)
+++.+.+.......+.+. +...+.++...++. +.++.++++.++++++.+.|++ .|++.+.. +..++++|
T Consensus 262 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~ 338 (407)
T 2zc0_A 262 GEILKKVLMQKQPIDFCA--PAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTK-PIAGMFVM 338 (407)
T ss_dssp HHHHHHHHHHHTTTTSSS--CHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCC-CSBSSEEE
T ss_pred HHHHHHHHHHHHhhcCCC--CHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEec-CCCcEEEE
Confidence 999988876655443333 33444444444432 3334555667788899999987 57777643 45678899
Q ss_pred EEeccchHHHHHHHHHHHHhc-CceeccC--------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 294 FEITEDSKLYAACLLKKLEEH-GVLVMPE--------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 294 ~~~~~~~~~~~~~~~~~l~~~-gi~~~~~--------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
+.++. +.+..++.+.|.++ ||.+.++ +..++|++++.. +++++++++++|+++++++.+
T Consensus 339 ~~~~~--~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~~~ 406 (407)
T 2zc0_A 339 FFLPE--GADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRP-SKEEIPIGIKKLAKLYKEKFG 406 (407)
T ss_dssp EECST--TCCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSS-CTTHHHHHHHHHHHHHHHHC-
T ss_pred EEcCC--CCCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHHhc
Confidence 99864 24677899999766 9999765 356899999744 899999999999999987643
No 29
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=7.8e-35 Score=260.31 Aligned_cols=329 Identities=16% Similarity=0.081 Sum_probs=245.8
Q ss_pred ccccccCCCCCC-hHHHHHHHHHcCCCCC--CccCCChHHHHHHHHHHHHh----CCC-----CeEEcCCchHHHHHHHH
Q 018243 4 RTVDLRSDTVTK-PTEAMRAAMASAEVDD--DVLMHDPTAFRLETEMAKVM----GKE-----AGLFVPSGTMGNLISVL 71 (359)
Q Consensus 4 ~~id~~~~~~~~-~~~~~~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~----~~~-----~~~~~~~gt~a~~~~l~ 71 (359)
++|||.++.+.. ++|.+.+++.+..... ..|+..++..++++.+++++ |.+ ..++++||++++..++.
T Consensus 48 ~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~ 127 (404)
T 2o1b_A 48 PLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPT 127 (404)
T ss_dssp CCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHH
T ss_pred CEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHH
Confidence 479999987653 4588999988765332 23555557789999999988 864 34667777888999988
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC-CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018243 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ-DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
.++ ++|++|+++.|+|.+... .+...|.+++.++.+. ++.+|+++|++.++ +++++|++++ ++|||
T Consensus 128 ~l~-~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~--------~~~~~v~l~~-p~npt 194 (404)
T 2o1b_A 128 CVI-NPGDYVLLPDPGYTDYLA---GVLLADGKPVPLNLEPPHYLPDWSKVDSQII--------DKTKLIYLTY-PNNPT 194 (404)
T ss_dssp HHC-CTTCEEEEEESCCSSHHH---HHHHTTCEEEEEECCTTTCCCCGGGSCHHHH--------HHEEEEEECS-SCTTT
T ss_pred Hhc-CCCCEEEEcCCCchhHHH---HHHHCCCEEEEeccCcccCcCCHHHHHHhhc--------cCceEEEEcC-CCCCC
Confidence 887 589999999999887654 2667788998887764 44579999999997 6889999965 56799
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh--cCccEEEEeccccCCCce-e-eEEecCHHHHHH
Q 018243 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV--QAADSASVCLSKGLGAPV-G-SVIVGSKEFIKK 226 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d~~~~s~~K~~g~~~-g-g~~~~~~~~~~~ 226 (359)
|.++|.+++++|+++|+++|++||+|++|..+.+.....+...+. .+.++++.|+||++|.++ . |++++++++++.
T Consensus 195 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~ 274 (404)
T 2o1b_A 195 GSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQA 274 (404)
T ss_dssp CCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHH
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHHHHH
Confidence 999999999999999999999999999986543321112233321 134567779999998543 2 888899999998
Q ss_pred HHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHH
Q 018243 227 ARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLY 303 (359)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 303 (359)
++........+. +...++++..+++ .+.++.++++.++++++.+.|+++ ++++.. +..+.++|+.++. +.+
T Consensus 275 l~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~g~~~~~~~~~--~~~ 348 (404)
T 2o1b_A 275 LKKYQTHTNAGM--FGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA-DLPFVH-AKGGIYVWLETPP--GYD 348 (404)
T ss_dssp HHHHHHHHCCCC--CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEC-CCBSSEEEEECCT--TCC
T ss_pred HHHHHhhccCCC--CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCeecC-CCcceEEEEeCCC--CCC
Confidence 887666555444 3344444444443 345556677888899999999998 887743 4456678988864 245
Q ss_pred HHHHHHHHH-hcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 304 AACLLKKLE-EHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 304 ~~~~~~~l~-~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
..++.++|. ++||.+.++. ..++|++++ .+++++++++++|+++++++
T Consensus 349 ~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~--~~~e~l~~~l~~l~~~l~~~ 403 (404)
T 2o1b_A 349 SEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLA--LDDQKLDEAAIRLTELAYLY 403 (404)
T ss_dssp HHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECC--SCTTHHHHHHHHHHGGGGGG
T ss_pred HHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEc--CCHHHHHHHHHHHHHHHHhh
Confidence 678888885 7899997752 578999996 37889999999999887754
No 30
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=1.4e-34 Score=257.16 Aligned_cols=328 Identities=18% Similarity=0.162 Sum_probs=239.5
Q ss_pred ccccccCCCCCCh-HHHHHHHHHcCCC-CCCccCCChHHHHHHHHHHHHhCC--------CCeEEcCCchHHHHHHHHHh
Q 018243 4 RTVDLRSDTVTKP-TEAMRAAMASAEV-DDDVLMHDPTAFRLETEMAKVMGK--------EAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~~~-~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~~~~--------~~~~~~~~gt~a~~~~l~~~ 73 (359)
..|||..+.+..+ ++.+.+++.+... ....|....+..++++.++++++. +..++++||++++..++.++
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l 111 (385)
T 1b5p_A 32 DLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAI 111 (385)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHH
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHh
Confidence 5689988876543 3777777765432 223465556678999999998742 23467777888998888888
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018243 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
+ ++||+|+++.|+|..... .++..|.+++.++.+. ++.+|+++|++.++ +++++|++++ ++||||
T Consensus 112 ~-~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~-p~NPtG 178 (385)
T 1b5p_A 112 L-DPGDEVIVLSPYWVSYPE---MVRFAGGVVVEVETLPEEGFVPDPERVRRAIT--------PRTKALVVNS-PNNPTG 178 (385)
T ss_dssp C-CTTCEEEEEESCCTHHHH---HHHHTTCEEEEEECCGGGTTCCCHHHHHTTCC--------TTEEEEEEES-SCTTTC
T ss_pred c-CCCCEEEEcCCCchhHHH---HHHHcCCEEEEeecCcccCCCCCHHHHHHhcC--------CCCEEEEEeC-CCCCCC
Confidence 7 599999999999876543 3677898999998763 56789999999988 6788998865 466999
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCce--eeEEecCHHHHHHHHH
Q 018243 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV--GSVIVGSKEFIKKARR 229 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~--gg~~~~~~~~~~~~~~ 229 (359)
.++|.+++++|.++|++||++||+|++|+.........+...+..+.++++.|+||.+|.++ .||+++++++++.+..
T Consensus 179 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~ 258 (385)
T 1b5p_A 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMAS 258 (385)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhcCCcccceEEEEeCHHHHHHHHH
Confidence 99999999999999999999999999975433211111223332223455669999998654 2899999999988877
Q ss_pred HHHhhCCCcchhHHHHHHHHHHHH------HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHH
Q 018243 230 LRKTLGGGMRQVGVLCAAALVALQ------ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLY 303 (359)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 303 (359)
.......+. +...+.++..+++ .+.++.++++.++++++.+.|+++ |+++. ++..++++|+.++. .+.+
T Consensus 259 ~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~-~~~~ 333 (385)
T 1b5p_A 259 VSRQSTTSP--DTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAV-RPSGAFYVLMDTSP-IAPD 333 (385)
T ss_dssp HHHTTTCSC--CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCSBTTEEEEECTT-TCSS
T ss_pred HHhhccCCC--CHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCeeEEEEEecCC-CCCC
Confidence 655443333 3333444433442 234446677888899999999988 88764 34567788888863 1246
Q ss_pred HHHHHHHHHhcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018243 304 AACLLKKLEEHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 304 ~~~~~~~l~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
..++.+.|.++||.+.++. .+++||++. .+++++++++++|+++++
T Consensus 334 ~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~--~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 334 EVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA--TSEENLRKALERFARVLG 383 (385)
T ss_dssp HHHHHHHHHHTTEECEESGGGTCTTEEEEECC--SCHHHHHHHHHHGGGGC-
T ss_pred HHHHHHHHHHCCeEEecccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 7789999999999997764 468999985 889999999999887664
No 31
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=5.6e-35 Score=261.60 Aligned_cols=332 Identities=15% Similarity=0.077 Sum_probs=244.1
Q ss_pred ccccccCCCC---C-ChHHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHhC------C--CCeEEcCCchHHHHHHH
Q 018243 4 RTVDLRSDTV---T-KPTEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVMG------K--EAGLFVPSGTMGNLISV 70 (359)
Q Consensus 4 ~~id~~~~~~---~-~~~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~------~--~~~~~~~~gt~a~~~~l 70 (359)
++|||.++.+ . .+++.+.+++.+.... ...|+..++..++++.++++++ . +..++++||++|+..++
T Consensus 39 ~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~ 118 (406)
T 1xi9_A 39 KVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIF 118 (406)
T ss_dssp CCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHH
T ss_pred CEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHH
Confidence 5789998876 3 3347778777664432 2246655667899999999873 2 23477777889999999
Q ss_pred HHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccC
Q 018243 71 LVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHAN 148 (359)
Q Consensus 71 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ 148 (359)
..++ ++|++|++++|+|.+... .+...|.+++.++.+. ++.+|+++|++.++ +++++|+++++ +|
T Consensus 119 ~~l~-~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~--------~~~~~v~i~~p-~n 185 (406)
T 1xi9_A 119 GALL-DPGDEILVPGPSYPPYTG---LVKFYGGKPVEYRTIEEEDWQPDIDDIRKKIT--------DRTKAIAVINP-NN 185 (406)
T ss_dssp HHHC-CTTCEEEEEESCCHHHHH---HHHHTTCEEEEEEEEGGGTSEECHHHHHHHCC--------TTEEEEEEESS-CT
T ss_pred HHhC-CCCCEEEEcCCCCccHHH---HHHHcCCEEEEeecCCCcCCcCCHHHHHHhhC--------cCceEEEEECC-CC
Confidence 8887 589999999999887554 3667888988887653 45689999999998 67899988654 66
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCc-cEEEEeccccCCCce--eeEEe--cCH--
Q 018243 149 CGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAA-DSASVCLSKGLGAPV--GSVIV--GSK-- 221 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~-d~~~~s~~K~~g~~~--gg~~~--~~~-- 221 (359)
|||.+++.+++++|.++|++||+++|+|++|..+.......+...+..+. ++++.|+||++|.++ .|+++ .++
T Consensus 186 ptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 265 (406)
T 1xi9_A 186 PTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENK 265 (406)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCT
T ss_pred CCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEeccccccCCCccEEEEEEEecCchh
Confidence 99999999999999999999999999999986644321112333332234 567779999998543 27777 888
Q ss_pred --HHHHHHHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEe
Q 018243 222 --EFIKKARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEI 296 (359)
Q Consensus 222 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~ 296 (359)
++++.+....... .+. +...+.++..+++ ...++.++++.++++++.+.|+++|++++.. +..+.++|+.+
T Consensus 266 ~~~l~~~l~~~~~~~-~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~ 341 (406)
T 1xi9_A 266 LSEVREAIDRLARIR-LCP--NTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTK-PQGAFYIFPKI 341 (406)
T ss_dssp THHHHHHHHHHHHHT-CCS--CSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEECCC-CCBSSEECCEE
T ss_pred HHHHHHHHHHHHHhh-cCC--CHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCeeec-CCeeEEEEEec
Confidence 8988887665543 332 3344444455553 2344466778888999999999988888743 44566777777
Q ss_pred ccchHHHHHHHHHHHH-hcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 297 TEDSKLYAACLLKKLE-EHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 297 ~~~~~~~~~~~~~~l~-~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+...+.+..++.+.|. ++||.+.++. ..++|++++ .+++++++++++|+++++++.
T Consensus 342 ~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~--~~~~~i~~~~~~l~~~l~~~~ 404 (406)
T 1xi9_A 342 EVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL--PPIEILEEAMDRFEKFMKERL 404 (406)
T ss_dssp CSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC--SCHHHHHHHHHHHHHHHHHC-
T ss_pred CccCCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHHHh
Confidence 6300136778998885 9999997753 578999996 899999999999999988764
No 32
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=1e-34 Score=257.44 Aligned_cols=321 Identities=13% Similarity=0.049 Sum_probs=239.8
Q ss_pred ccccccCCCCCC-hHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHh----CC----CCeEEcCCchHHHHHHHHHhh
Q 018243 4 RTVDLRSDTVTK-PTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVM----GK----EAGLFVPSGTMGNLISVLVHC 74 (359)
Q Consensus 4 ~~id~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~----~~~~~~~~gt~a~~~~l~~~~ 74 (359)
.+|||.++.+.. ++|.+.+++.+.......|+...+..++++.+++++ |. +..++++||++++..++..++
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~ 103 (376)
T 3ezs_A 24 RGLDLGIGEPQFETPKFIQDALKNHTHSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVL 103 (376)
T ss_dssp CCCBCSSCCCCSCCCHHHHHHHHTTGGGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHT
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHc
Confidence 578999886654 458999999887644445666566788888888877 64 234788888899999999888
Q ss_pred hhc--CCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018243 75 ETR--GSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 75 ~~~--g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
++ |++|+++.|+|.+... .+...|.+++.++.+.++.+++ ++++.++ +++++|+++++ +||||.
T Consensus 104 -~~~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~-~l~~~~~--------~~~~~v~~~~p-~nptG~ 169 (376)
T 3ezs_A 104 -FDYQNPTIAYPNPFYQIYEG---AAKFIKAKSLLMPLTKENDFTP-SLNEKEL--------QEVDLVILNSP-NNPTGR 169 (376)
T ss_dssp -TTCSSCEEEEEESCCTHHHH---HHHHTTCEEEEEECCGGGTSCC-CCCHHHH--------HHCSEEEECSS-CTTTCC
T ss_pred -CCCCCCEEEEecCCcHhHHH---HHHHcCCEEEEcccCCCCCcch-hHHhhhc--------cCCCEEEEcCC-CCCcCC
Confidence 58 9999999999887654 3677888999998776545555 6777777 67889999654 679999
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh-------hcCccEEEEeccccCCCce-e-eEEecCHHH
Q 018243 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL-------VQAADSASVCLSKGLGAPV-G-SVIVGSKEF 223 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-------~~~~d~~~~s~~K~~g~~~-g-g~~~~~~~~ 223 (359)
+++.+++++|+++|++||+++|+||+|..+.......+.... ..+.++++.|+||++|.++ + |++++++++
T Consensus 170 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~ 249 (376)
T 3ezs_A 170 TLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRL 249 (376)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHH
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCHHH
Confidence 999999999999999999999999998654443222222222 1244566779999997543 2 888899999
Q ss_pred HHHHHHHHHhhCCCcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchH
Q 018243 224 IKKARRLRKTLGGGMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSK 301 (359)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 301 (359)
.+.+.......+.+. +...++++..+++ ...++.++++.++++++.+.|+ ++. .+..++++|+.++
T Consensus 250 ~~~~~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~---~~~---~~~~~~~~~~~~~---- 317 (376)
T 3ezs_A 250 LEKYKAFRAYLGYTS--ANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK---NTL---IYPYSFYVYLPVQ---- 317 (376)
T ss_dssp HHHHHHHHTTTCCCC--CHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST---TCC---CCSBSSEEEEECS----
T ss_pred HHHHHHHHhhhcCCC--ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc---CCC---CCCcceEEEEECC----
Confidence 999877665544444 4445555555553 3345566777888888888887 444 3568889999886
Q ss_pred HHHHHHHHHHHh-cCceeccC--------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 302 LYAACLLKKLEE-HGVLVMPE--------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 302 ~~~~~~~~~l~~-~gi~~~~~--------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+..++.+.|.+ +||.+.++ +..++|++++ .+++++++++++|++++++.
T Consensus 318 -~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l~~~ 375 (376)
T 3ezs_A 318 -NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALV--YDTPLLEKPLEIIETYRENH 375 (376)
T ss_dssp -CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECC--SCHHHHHHHHHHHHHHHCC-
T ss_pred -CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEc--CCHHHHHHHHHHHHHHHHhc
Confidence 35678888866 99999654 4578999996 49999999999999988653
No 33
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=9.6e-35 Score=258.88 Aligned_cols=333 Identities=16% Similarity=0.102 Sum_probs=238.1
Q ss_pred cccccccCCCCCCh-HHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHhC------C--CCeEEcCCchHHHHHHHHH
Q 018243 3 TRTVDLRSDTVTKP-TEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVMG------K--EAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~~~~~-~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~------~--~~~~~~~~gt~a~~~~l~~ 72 (359)
.++|||.++.+..+ +|.+.+++.+.... ...|+...+..++++.++++++ . +..++++||++|+..++..
T Consensus 31 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~ 110 (391)
T 3h14_A 31 RRIIHMEVGQPGTGAPRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTA 110 (391)
T ss_dssp CCCEECCCSSCSSCSCHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHH
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHH
Confidence 36799999877655 48899998875543 3345555567899999998874 2 2357888888999999998
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCC--CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018243 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQD--GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
++ ++||+|+++.|+|.+... .+...|.+++.++.+.+ +.+|+++|++. ++++|+++++ +|||
T Consensus 111 l~-~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~-----------~~~~v~i~~p-~npt 174 (391)
T 3h14_A 111 LF-DSGDRVGIGAPGYPSYRQ---ILRALGLVPVDLPTAPENRLQPVPADFAGL-----------DLAGLMVASP-ANPT 174 (391)
T ss_dssp HC-CTTCEEEEEESCCHHHHH---HHHHTTCEEEEEECCGGGTTSCCHHHHTTS-----------CCSEEEEESS-CTTT
T ss_pred hc-CCCCEEEEcCCCCccHHH---HHHHcCCEEEEeecCcccCCCCCHHHHHhc-----------CCeEEEECCC-CCCC
Confidence 87 599999999999887654 36778989999977643 46788877653 4678888655 6699
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCc-ee-eEEecCHHHHHHHH
Q 018243 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAP-VG-SVIVGSKEFIKKAR 228 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~-~g-g~~~~~~~~~~~~~ 228 (359)
|.+++.+++++|+++|++||+++|+|++|..+.......+...+ ....+++.|+||++|.+ .+ |+++.++++.+.+.
T Consensus 175 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~ 253 (391)
T 3h14_A 175 GTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALEL-TDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVE 253 (391)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGT-CSSSEEEEESSSTTCCTTSCCEEEECCGGGHHHHH
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhc-CCCEEEEEechhccCCccceeEEEEeCHHHHHHHH
Confidence 99999999999999999999999999998654432222222222 23346666999999743 33 88999999999888
Q ss_pred HHHHhhCCCcchhHHHHHHHHHHH--HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHH
Q 018243 229 RLRKTLGGGMRQVGVLCAAALVAL--QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAAC 306 (359)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (359)
........+.+ ...+.++..++ ....++.++++.++++++.+.|+++ ++.....+..+.++|+.++. .+.+..+
T Consensus 254 ~~~~~~~~~~~--~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 329 (391)
T 3h14_A 254 RIAQNMFICAP--HASQVAALAALDCDAELQANLDVYKANRKLMLERLPKA-GFTRIAPPDGAFYVYADVSD-LTDDSRA 329 (391)
T ss_dssp HHHHHTTCCCC--HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCBCCCCBTTEEEEECTT-TCSCHHH
T ss_pred HHHhhhccCCC--HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCCcccCCCeeEEEEEecCc-cCCCHHH
Confidence 77666555543 33333443444 3445557777888999999999988 55443345567788888864 1246788
Q ss_pred HHHHHHh-cCceeccC-------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhhcC
Q 018243 307 LLKKLEE-HGVLVMPE-------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCEENG 358 (359)
Q Consensus 307 ~~~~l~~-~gi~~~~~-------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~ 358 (359)
+.++|.+ +||.+.++ +..++|++++ .+++++++++++|++++++....++
T Consensus 330 ~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~~~~~~~~~~ 387 (391)
T 3h14_A 330 FAAEILEKAGVAVTPGLDFDPERGAGTLRFSYA--RATADIEEGLDRLEAFMQARGEGHH 387 (391)
T ss_dssp HHHHHHHHHCEECEEGGGTCTTTGGGEEEEECC--SCHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHCCEEEcCchhhCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhccccc
Confidence 9888754 69999764 2568999996 4889999999999999998776544
No 34
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.9e-34 Score=257.43 Aligned_cols=332 Identities=16% Similarity=0.177 Sum_probs=245.4
Q ss_pred ccccccCCCCCC-hHHHHHHHHHcCCCCC--CccCCChHHHHHHHHHHHHh----CC-----CCeEEcCCchHHHHHHHH
Q 018243 4 RTVDLRSDTVTK-PTEAMRAAMASAEVDD--DVLMHDPTAFRLETEMAKVM----GK-----EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 4 ~~id~~~~~~~~-~~~~~~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~----~~-----~~~~~~~~gt~a~~~~l~ 71 (359)
.+|||.++.+.. ++|.+.+++.+..... ..|+..++..++++.+++++ |. +..++++||++|+..++.
T Consensus 38 ~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~ 117 (412)
T 2x5d_A 38 DIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLML 117 (412)
T ss_dssp CCEECSSCCCCSCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHH
T ss_pred CEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHH
Confidence 468999987653 4589999998866432 34655667889999999998 74 245788888899999999
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCC--CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC
Q 018243 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQD--GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC 149 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p 149 (359)
.++ ++|++|+++.|+|.+... .+...|.+++.++.+.+ +.+|+++|++.++ +++++|+++++ +||
T Consensus 118 ~~~-~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~--------~~~~~v~l~~p-~np 184 (412)
T 2x5d_A 118 ATL-DHGDTILVPNPSYPIHIY---GAVIAGAQVRSVPLVPGIDFFNELERAIRESI--------PKPRMMILGFP-SNP 184 (412)
T ss_dssp HHC-CTTCEEEEEESCCHHHHH---HHHHHTCEEEEEECSTTSCHHHHHHHHHHTEE--------SCCSEEEEESS-CTT
T ss_pred HhC-CCCCEEEEcCCCchhHHH---HHHHcCCEEEEeecCCccCCCCCHHHHHHhcc--------cCceEEEECCC-CCC
Confidence 887 589999999999887654 36677888888877654 2368899999888 67889998655 679
Q ss_pred CceecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhh--cCccEEEEeccccCCCce-e-eEEecCHHHH
Q 018243 150 GGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLV--QAADSASVCLSKGLGAPV-G-SVIVGSKEFI 224 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~--~~~d~~~~s~~K~~g~~~-g-g~~~~~~~~~ 224 (359)
||.+++.+++++|+++|++||+++|+|++|..+.+.. ...+...+. .+.++++.|+||++|.++ . |+++++++++
T Consensus 185 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 264 (412)
T 2x5d_A 185 TAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELV 264 (412)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCHHHH
Confidence 9999999999999999999999999999986654321 122333332 245677789999998543 2 8888999999
Q ss_pred HHHHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccch-
Q 018243 225 KKARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDS- 300 (359)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~- 300 (359)
+.+.........+. +...+.++..+++ .+.++.++++.++++++.+.|+++ ++.+. ++..+.++|+.++...
T Consensus 265 ~~l~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~g~~~~~~~~~~~~ 340 (412)
T 2x5d_A 265 SALARIKSYHDYGT--FTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA-GWMVE-NPKASMYVWAKIPEPYA 340 (412)
T ss_dssp HHHHHHHHHHCCCC--CHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHH-TCCCC-CCSBSSEEEEECCTTTG
T ss_pred HHHHHHHhhhccCC--CHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEec-CCCeeeEEEEEcCCccC
Confidence 98877665544444 3344445555554 345556777888999999999988 87764 3445678899886420
Q ss_pred HHHHHHHHHHH-HhcCceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 301 KLYAACLLKKL-EEHGVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 301 ~~~~~~~~~~l-~~~gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
..+..++.+.| .++||.+.++ +..++|++++ .+++++++++++|+++++++.
T Consensus 341 ~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~l~~~~ 399 (412)
T 2x5d_A 341 HLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALI--ENRDRLRQAVRGIKAMFRADG 399 (412)
T ss_dssp GGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHhcC
Confidence 01567899998 5689999765 2568999996 389999999999999998754
No 35
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=7.9e-35 Score=258.23 Aligned_cols=327 Identities=12% Similarity=0.060 Sum_probs=238.7
Q ss_pred cccccccCCCCCC-hHHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHhC------C--CCeEEcCCchHHHHHHHHH
Q 018243 3 TRTVDLRSDTVTK-PTEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVMG------K--EAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~~~~~-~~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~------~--~~~~~~~~gt~a~~~~l~~ 72 (359)
..+|||.++.... ++|.+.+++.+.... ...|+. .. .++++.++++++ . +..++++||++++..++..
T Consensus 23 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~ 100 (377)
T 3fdb_A 23 QGVLPLWVAESDFSTCPAVLQAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDH 100 (377)
T ss_dssp TTSEECCSSCCCSCCCHHHHHHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHH
T ss_pred CCeeeecccCCCCCCCHHHHHHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHH
Confidence 4679999886654 458888888775433 334554 44 788888888876 3 2457788888999999988
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018243 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
++ ++|++|+++.|+|.+... .+...|.+++.++.+.+ +|+++|++.++ +++++++++++ +||||.
T Consensus 101 ~~-~~gd~vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~--~d~~~l~~~l~--------~~~~~v~i~~p-~nptG~ 165 (377)
T 3fdb_A 101 FT-PAQSKVIVPTPAYPPFFH---LLSATQREGIFIDATGG--INLHDVEKGFQ--------AGARSILLCNP-YNPLGM 165 (377)
T ss_dssp HS-CTTCCEEEEESCCTHHHH---HHHHHTCCEEEEECTTS--CCHHHHHHHHH--------TTCCEEEEESS-BTTTTB
T ss_pred hc-CCCCEEEEcCCCcHhHHH---HHHHcCCEEEEccCCCC--CCHHHHHHHhc--------cCCCEEEEeCC-CCCCCC
Confidence 87 599999999999888654 36777889999987766 89999999999 56888888776 669999
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccchhhh--cCchhHhhh-cCccEEEEeccccCCCcee--eEEe-cCHHHHHH
Q 018243 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA--LGVPVRRLV-QAADSASVCLSKGLGAPVG--SVIV-GSKEFIKK 226 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~--~~~~~~~~~-~~~d~~~~s~~K~~g~~~g--g~~~-~~~~~~~~ 226 (359)
+++.+++++|+++|++||+++|+|++|..+.... ...+...+. .+.++++.|+||++|.++. |+++ .++++.+.
T Consensus 166 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~ 245 (377)
T 3fdb_A 166 VFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEH 245 (377)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHH
Confidence 9999999999999999999999999976543321 111222221 1233666799999975432 6555 58888888
Q ss_pred HHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhc-CCCceEecCCccceEEEEEeccchHH
Q 018243 227 ARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQ-LKGLRVDVDAVETNIVYFEITEDSKL 302 (359)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~ 302 (359)
++........+. +...++++..+++ .+.++.+++..++++++.+.|++ +|++++.. +..+.++|+.++.. +.
T Consensus 246 ~~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~-~~ 321 (377)
T 3fdb_A 246 WQQLSPVIKDGA--STLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITP-MQATYLMWIDFRDT-TI 321 (377)
T ss_dssp HHHSCHHHHCCC--CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECC-CSBCSEEEEECTTS-CC
T ss_pred HHHHHHhhcCCC--CHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEec-CCeeEEEEEECccc-CC
Confidence 776554443333 3344444444443 34455777788899999999998 78988753 44666778888752 12
Q ss_pred HHHHHHHHH-HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 303 YAACLLKKL-EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 303 ~~~~~~~~l-~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+ .++.+.| +++||.+.++. ..++|++++ .+++++++++++|+++++++
T Consensus 322 ~-~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~--~~~e~i~~~l~~l~~~l~~~ 376 (377)
T 3fdb_A 322 E-GSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFA--TSREVLEEAIDRMAKAVSHH 376 (377)
T ss_dssp C-SCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHHTTC
T ss_pred C-HHHHHHHHHhCCEEecCChhccCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHhhc
Confidence 2 4667777 55699997653 578999996 58999999999999988653
No 36
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-34 Score=261.89 Aligned_cols=327 Identities=16% Similarity=0.113 Sum_probs=243.4
Q ss_pred cccccccCCCCCC-hHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHh----CCC----CeEEcCCchHHHHHHHH
Q 018243 3 TRTVDLRSDTVTK-PTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVM----GKE----AGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~~~~~-~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~----~~~----~~~~~~~gt~a~~~~l~ 71 (359)
..+|||..+.+.. +++.+.+++.+.... ...|+...+..++++++++++ |.+ ..++++||++|+..++.
T Consensus 57 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~ 136 (447)
T 3b46_A 57 RELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLM 136 (447)
T ss_dssp SCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHH
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHH
Confidence 3579999886543 348888888876543 234666666789999999987 332 24667777899999999
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC------------CCCCCHHHHHHHhcCCCCCccCCceeE
Q 018243 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ------------DGTMDIDLIEAAIRDPKGEIVYPTTRL 139 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~------------~~~~~~~~l~~~l~~~~~~~~~~~~~~ 139 (359)
.++ ++||+|++++|+|.+... .+...|.+++.++.+. ++.+|+++|++.++ +++++
T Consensus 137 ~l~-~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~--------~~~~~ 204 (447)
T 3b46_A 137 GLL-NAGDEVIVFEPFFDQYIP---NIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAIT--------SKTKA 204 (447)
T ss_dssp HHC-CTTCEEEEEESCCTTHHH---HHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCC--------TTEEE
T ss_pred HHc-CCCCEEEEeCCCchhHHH---HHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhc--------cCCeE
Confidence 887 599999999999877553 3677888888887543 45789999999987 68999
Q ss_pred EEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh---hcCccEEEEeccccCCCce--e
Q 018243 140 ICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL---VQAADSASVCLSKGLGAPV--G 214 (359)
Q Consensus 140 v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~~d~~~~s~~K~~g~~~--g 214 (359)
|++++ ++||||.+++.+++++|+++|++||++||+||+|....+.....+...+ ..+.++++.|+||++++++ .
T Consensus 205 v~l~~-p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~ri 283 (447)
T 3b46_A 205 VIINT-PHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRI 283 (447)
T ss_dssp EEEES-SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCC
T ss_pred EEEeC-CCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhh
Confidence 99965 5679999999999999999999999999999998654332111233322 2356788889999998654 2
Q ss_pred eEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHH-----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCcc
Q 018243 215 SVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQ-----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVE 288 (359)
Q Consensus 215 g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~ 288 (359)
||+++ ++++++.+.........+. +...+.++..+++ .+.++.++++.++++++.+.|+++ |+++. .+..
T Consensus 284 G~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~ 359 (447)
T 3b46_A 284 GWVLSLNAELLSYAAKAHTRICFAS--PSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL-GLPYT-APEG 359 (447)
T ss_dssp EEEECSCHHHHHHHHHHHHHHTSSC--CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-TCCEE-CCSB
T ss_pred EEEEeCCHHHHHHHHHHHhhccCCC--ChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCe
Confidence 88999 9999998876655444444 3333444444443 334556777888999999999998 88875 3557
Q ss_pred ceEEEEEeccc---h----------HHHHHHHHHHH-HhcCceeccCC-----------CcEEEEEeCCCCCHHHHHHHH
Q 018243 289 TNIVYFEITED---S----------KLYAACLLKKL-EEHGVLVMPES-----------STRVRIVVHHQISANDVHYTL 343 (359)
Q Consensus 289 ~~~~~~~~~~~---~----------~~~~~~~~~~l-~~~gi~~~~~~-----------~~~lRi~~~~~~~~~~i~~~~ 343 (359)
+.++|+.++.. . ..+..++.++| .++||.+.|++ .+++|+++. .+++++++++
T Consensus 360 g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~--~~~e~l~~~~ 437 (447)
T 3b46_A 360 TYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVC--KDDAYLENAV 437 (447)
T ss_dssp SSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECC--SCHHHHHHHH
T ss_pred eEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEe--CCHHHHHHHH
Confidence 88999988641 0 13567888888 47899997762 578999995 5899999999
Q ss_pred HHHHH
Q 018243 344 SCFQK 348 (359)
Q Consensus 344 ~~l~~ 348 (359)
++|++
T Consensus 438 ~~l~~ 442 (447)
T 3b46_A 438 ERLKL 442 (447)
T ss_dssp HHGGG
T ss_pred HHHHH
Confidence 99976
No 37
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=4.2e-34 Score=254.30 Aligned_cols=326 Identities=15% Similarity=0.095 Sum_probs=242.5
Q ss_pred ccccccCCCCC-ChHHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHh----CC----C-CeEEcCCchHHHHHHHHH
Q 018243 4 RTVDLRSDTVT-KPTEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVM----GK----E-AGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 4 ~~id~~~~~~~-~~~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~----~~----~-~~~~~~~gt~a~~~~l~~ 72 (359)
.+|||.++.+. .+++.+.+++.+.... ...|+...+..++++.+++++ |. + ..++++||++++..++..
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~ 110 (386)
T 1u08_A 31 QAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITA 110 (386)
T ss_dssp TCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHH
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHH
Confidence 57899988665 3458888888765432 334655556788999999885 53 2 457778888899999988
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC-CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018243 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ-DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
++ ++|++|++++|+|.+... .++..|.+++.++.+. ++.+|+++|++.++ +++++|++++ ++||||
T Consensus 111 ~~-~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~--------~~~~~v~l~~-p~nptG 177 (386)
T 1u08_A 111 LV-RNGDEVICFDPSYDSYAP---AIALSGGIVKRMALQPPHFRVDWQEFAALLS--------ERTRLVILNT-PHNPSA 177 (386)
T ss_dssp HC-CTTCEEEEEESCCTTHHH---HHHHTTCEEEEEECCTTTCCCCHHHHHHHCC--------TTEEEEEEES-SCTTTC
T ss_pred hC-CCCCEEEEeCCCchhHHH---HHHHcCCEEEEeecCcccCcCCHHHHHHhhc--------ccCEEEEEeC-CCCCCC
Confidence 87 589999999999887554 3677888999887764 57789999999997 6889999965 466999
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhh--hcCccEEEEeccccCCCce--eeEEecCHHHHHH
Q 018243 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRL--VQAADSASVCLSKGLGAPV--GSVIVGSKEFIKK 226 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~--~~~~d~~~~s~~K~~g~~~--gg~~~~~~~~~~~ 226 (359)
.++|.+++++|+++|++||+++|+|++|..+.+... ..+...+ ..+.++++.|+||++|.++ .|++++++++++.
T Consensus 178 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 257 (386)
T 1u08_A 178 TVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAE 257 (386)
T ss_dssp CCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHHHHHH
Confidence 999999999999999999999999999865433211 1123222 1356788889999998544 2889999999988
Q ss_pred HHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHH
Q 018243 227 ARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLY 303 (359)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 303 (359)
++........+. +...+.++..+++ .+.++.++++.++++++.+.|++. ++++. .+..++++|+.++.....+
T Consensus 258 l~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~g~~~~~~~~~~~~~~ 333 (386)
T 1u08_A 258 IRKVHQYLTFSV--NTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNES-RLEIL-PCEGTYFLLVDYSAVSTLD 333 (386)
T ss_dssp HHHHHHHHTSSC--CHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSS-SCEEC-CCCBSSEEEEECTTTCCSC
T ss_pred HHHHHHhhccCC--ChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCceEEEEEecCCCCCCC
Confidence 877665444443 3333444444554 345556777888999999999998 88874 3446788999887410025
Q ss_pred HHHHHHHH-HhcCceeccC--------CCcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018243 304 AACLLKKL-EEHGVLVMPE--------SSTRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 304 ~~~~~~~l-~~~gi~~~~~--------~~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
..++.++| +++||.+.++ +..++|++++ .+++++++++++|++
T Consensus 334 ~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~--~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 334 DVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFA--KKESTLLAAAERLRQ 385 (386)
T ss_dssp HHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECC--SCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEc--CCHHHHHHHHHHHhh
Confidence 67888888 5789999764 3568999995 589999999998864
No 38
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-34 Score=260.11 Aligned_cols=333 Identities=19% Similarity=0.148 Sum_probs=244.0
Q ss_pred cccccccCCCCC-ChHHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHh----CCC-----CeEEcCCchHHHHHHHH
Q 018243 3 TRTVDLRSDTVT-KPTEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVM----GKE-----AGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~~~~-~~~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~----~~~-----~~~~~~~gt~a~~~~l~ 71 (359)
+.+|||.++.+. .++|.+.+++.+.... ...|...++..++++.+++++ |.+ ..++++||++|+..++.
T Consensus 25 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~ 104 (411)
T 2o0r_A 25 IGAVNLGQGFPDEDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVL 104 (411)
T ss_dssp TTCEESSCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHH
T ss_pred CCeeeccCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHH
Confidence 357899988665 3458888888765433 345665566788999999886 532 45677778889999998
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC---CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccC
Q 018243 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ---DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHAN 148 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ 148 (359)
.++ ++|++|++++|+|.+... .+...|.+++.++.+. ++.+|+++|++.++ +++++|+++++ +|
T Consensus 105 ~~~-~~gd~Vl~~~~~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~--------~~~~~v~l~~~-~n 171 (411)
T 2o0r_A 105 GLV-EPGSEVLLIEPFYDSYSP---VVAMAGAHRVTVPLVPDGRGFALDADALRRAVT--------PRTRALIINSP-HN 171 (411)
T ss_dssp HHC-CTTCEEEEEESCCTTHHH---HHHHTTCEEEEEECEEETTEEECCHHHHHHHCC--------TTEEEEEEESS-CT
T ss_pred Hhc-CCCCEEEEeCCCcHhHHH---HHHHcCCEEEEeeccccccCCCCCHHHHHHhhc--------cCceEEEEeCC-CC
Confidence 887 589999999999888654 3677888888887653 35689999999998 68899998654 66
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhh--cCccEEEEeccccCCCce--eeEEecCHHH
Q 018243 149 CGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLV--QAADSASVCLSKGLGAPV--GSVIVGSKEF 223 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~--~~~d~~~~s~~K~~g~~~--gg~~~~~~~~ 223 (359)
|||.+++.+++++|+++|++||+++|+|++|..+.+... ..+...+. .+.|+++.|+||++|.++ .|++++++++
T Consensus 172 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 251 (411)
T 2o0r_A 172 PTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAEL 251 (411)
T ss_dssp TTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCHHH
Confidence 999999999999999999999999999999865443211 12232221 256788889999998554 3888899999
Q ss_pred HHHHHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccch
Q 018243 224 IKKARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDS 300 (359)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 300 (359)
.+.+.......+.+.+. ..++++..+++ .+.++.++++.++++++.+.|++. |+++. .+..+.++|+.++...
T Consensus 252 ~~~l~~~~~~~~~~~~~--~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~g~~~~~~~~~~~ 327 (411)
T 2o0r_A 252 IAGVRAAKQYLSYVGGA--PFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEI-GFAVH-DSYGTYFLCADPRPLG 327 (411)
T ss_dssp HHHHHHHHHHHTSCCCT--THHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEC-CCCBSSEEEEECGGGT
T ss_pred HHHHHHHHhhccCCCCh--HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCEec-CCCeeEEEEEecCCCC
Confidence 98887766554444322 22333334443 344556777888899999999988 88874 3445678999887410
Q ss_pred HHHHHHHHHHH-HhcCceeccC-----------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 301 KLYAACLLKKL-EEHGVLVMPE-----------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 301 ~~~~~~~~~~l-~~~gi~~~~~-----------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+.+..++.++| .++||.+.++ +..++||++. .+++++++++++|++++++..
T Consensus 328 ~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~~~~~~~ 397 (411)
T 2o0r_A 328 YDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC--KRDDTLDEAIRRLSVLAERPA 397 (411)
T ss_dssp CCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECC--SCHHHHHHHHHHHGGGGC---
T ss_pred CCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHhccC
Confidence 12467888888 5789998654 2467999995 589999999999999887654
No 39
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=3.8e-34 Score=258.11 Aligned_cols=330 Identities=14% Similarity=0.101 Sum_probs=244.1
Q ss_pred ccccccCCCCC-ChHHHHHHHHHcCCCC----CCccCCChHHHHHHHHHHHHh----CC----C-CeEEcCCchHHHHHH
Q 018243 4 RTVDLRSDTVT-KPTEAMRAAMASAEVD----DDVLMHDPTAFRLETEMAKVM----GK----E-AGLFVPSGTMGNLIS 69 (359)
Q Consensus 4 ~~id~~~~~~~-~~~~~~~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~----~~----~-~~~~~~~gt~a~~~~ 69 (359)
.+|||.++.+. .++|.+.+++.+.... ...|+..++..++++.+++++ |. + ..++++||++|+..+
T Consensus 38 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~ 117 (429)
T 1yiz_A 38 KPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYAT 117 (429)
T ss_dssp CCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHH
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHH
Confidence 57899998665 4558888888775433 234555556788999988886 53 2 456777778899999
Q ss_pred HHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC----------CCCCCHHHHHHHhcCCCCCccCCceeE
Q 018243 70 VLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ----------DGTMDIDLIEAAIRDPKGEIVYPTTRL 139 (359)
Q Consensus 70 l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----------~~~~~~~~l~~~l~~~~~~~~~~~~~~ 139 (359)
+..++ ++|++|+++.|+|.+... .+...|.+++.++.+. ++.+|+++|++.++ +++++
T Consensus 118 ~~~~~-~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~--------~~~~~ 185 (429)
T 1yiz_A 118 IQGHV-DEGDEVIIIEPFFDCYEP---MVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFN--------EKTKM 185 (429)
T ss_dssp HHHHC-CTTCEEEEEESCCTTHHH---HHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCC--------TTEEE
T ss_pred HHHhc-CCCCEEEEcCCCchhHHH---HHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhc--------cCceE
Confidence 99887 589999999999887554 2667788888887654 45789999999997 68899
Q ss_pred EEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhh--hcCccEEEEeccccCCCce--e
Q 018243 140 ICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRL--VQAADSASVCLSKGLGAPV--G 214 (359)
Q Consensus 140 v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~--~~~~d~~~~s~~K~~g~~~--g 214 (359)
|+++++ +||||.++|.+++++|+++|++||+++|+||+|..+.+... ..+...+ ..+.++++.|+||++|+++ .
T Consensus 186 v~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~ 264 (429)
T 1yiz_A 186 IIINTP-HNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKI 264 (429)
T ss_dssp EEEESS-CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCC
T ss_pred EEECCC-CCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcce
Confidence 999655 66999999999999999999999999999999865433211 1223222 1356788889999998544 2
Q ss_pred eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHH----------hHHHHhhhHHHHHHHHHHHHhcCCCceEec
Q 018243 215 SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQE----------NVLVMLDGDHKKAKLLAEGLNQLKGLRVDV 284 (359)
Q Consensus 215 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~ 284 (359)
|++++++++++.+.........+. +...++++..+++. +.++.++++.++++++.+.|+++ ++.+..
T Consensus 265 G~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 341 (429)
T 1yiz_A 265 GWAYGPEALLKNLQMVHQNCVYTC--ATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV-GMNPTV 341 (429)
T ss_dssp EEEESCHHHHHHHHHHHHTTTCCC--CHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred EEEEeCHHHHHHHHHHHhhcccCC--ChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccC
Confidence 889999999888876554433333 33444444445543 34556667888899999999988 888753
Q ss_pred CCccceEEEEEeccch----------HHHHHHHHHHH-HhcCceeccCC-----------CcEEEEEeCCCCCHHHHHHH
Q 018243 285 DAVETNIVYFEITEDS----------KLYAACLLKKL-EEHGVLVMPES-----------STRVRIVVHHQISANDVHYT 342 (359)
Q Consensus 285 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~l-~~~gi~~~~~~-----------~~~lRi~~~~~~~~~~i~~~ 342 (359)
+..++++|+.++... ..+..++.++| .++||.+.++. .+++|++++ .++++++++
T Consensus 342 -~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~--~~~e~i~~~ 418 (429)
T 1yiz_A 342 -PQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFF--KKDENLQKA 418 (429)
T ss_dssp -CSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECC--SCHHHHHHH
T ss_pred -CCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEec--CCHHHHHHH
Confidence 446788999987520 02567888888 48999997652 578999996 589999999
Q ss_pred HHHHHHHHHH
Q 018243 343 LSCFQKIYAG 352 (359)
Q Consensus 343 ~~~l~~~~~~ 352 (359)
+++|++++++
T Consensus 419 l~~l~~~l~~ 428 (429)
T 1yiz_A 419 AEILRKWKGS 428 (429)
T ss_dssp HHHHHHHSCC
T ss_pred HHHHHHhccC
Confidence 9999987653
No 40
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=3.1e-34 Score=256.93 Aligned_cols=329 Identities=16% Similarity=0.120 Sum_probs=245.2
Q ss_pred ccccccCCCCC-ChHHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHhCC--------CCeEEcCCchHHHHHHHHHh
Q 018243 4 RTVDLRSDTVT-KPTEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVMGK--------EAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~-~~~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~~--------~~~~~~~~gt~a~~~~l~~~ 73 (359)
++|||.++.+. .+++.+.+++ +.... ...|+..++..++++.++++++. +..++++||++|+..++..+
T Consensus 44 ~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~ 122 (409)
T 2gb3_A 44 RIHHLNIGQPDLKTPEVFFERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVI 122 (409)
T ss_dssp EEEECSSCCCCSCCCTHHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHH
T ss_pred CEEeccCCCCCCCCCHHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHh
Confidence 57899998776 3457888888 65433 23466566678999999999853 34578888899999999988
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018243 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
+ ++|++|++++|+|.+... .+...|.+++.++.+. ++.+ +++|++.++ +++++|+++++ +||||
T Consensus 123 ~-~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~--------~~~~~v~~~~p-~nptG 188 (409)
T 2gb3_A 123 A-NPGDEILVLEPFYANYNA---FAKIAGVKLIPVTRRMEEGFAI-PQNLESFIN--------ERTKGIVLSNP-CNPTG 188 (409)
T ss_dssp C-CTTCEEEEEESCCTHHHH---HHHHHTCEEEEEECCGGGTSCC-CTTGGGGCC--------TTEEEEEEESS-CTTTC
T ss_pred C-CCCCEEEEcCCCchhHHH---HHHHcCCEEEEeccCCCCCCcc-HHHHHHhhC--------cCCeEEEECCC-CCCCC
Confidence 7 589999999999887654 2667788998887764 3444 788888887 67889988655 66999
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCce--eeEEecCH-HHHHHHH
Q 018243 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV--GSVIVGSK-EFIKKAR 228 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~--gg~~~~~~-~~~~~~~ 228 (359)
.+++.+++++|.++|+++|+++|+|++|+.+.......+...-..+.|+++.|+||++|.++ .|++++++ ++.+.++
T Consensus 189 ~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~ 268 (409)
T 2gb3_A 189 VVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAM 268 (409)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHH
Confidence 99999999999999999999999999986654321111211101245788889999998654 38888877 8888887
Q ss_pred HHHHhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHH
Q 018243 229 RLRKTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAA 305 (359)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (359)
....... +. +...++++..++ ....++.++++.++++++.+.|+++ ++++...+..+.++|+.++. .+..
T Consensus 269 ~~~~~~~-~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~---~~~~ 341 (409)
T 2gb3_A 269 KLAQGRL-AP--PLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH-GLKRFTKPSGAFYITAELPV---EDAE 341 (409)
T ss_dssp HHHHHSC-CC--CHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCSBSSEEEEECSS---SCHH
T ss_pred HHHhccC-CC--CHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc-CceeeeCCCeeEEEEEEeCC---CCHH
Confidence 6665543 32 444455555556 2345556677888899999999998 88762234567788888863 3677
Q ss_pred HHHHHHHhc------CceeccC---------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 018243 306 CLLKKLEEH------GVLVMPE---------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCEE 356 (359)
Q Consensus 306 ~~~~~l~~~------gi~~~~~---------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 356 (359)
++.+.|.++ ||.+.++ +..++|++++ ++++++++++++|+++++++..+
T Consensus 342 ~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~~~ 405 (409)
T 2gb3_A 342 EFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV--LEKDLLSRAIDVLMEGLKMFCSS 405 (409)
T ss_dssp HHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC--SCHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHhhhc
Confidence 899999765 9999664 2578999996 89999999999999999887643
No 41
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=6.5e-34 Score=253.99 Aligned_cols=325 Identities=14% Similarity=0.090 Sum_probs=241.2
Q ss_pred cccccccCCCCCCh-HHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHh----CC-----C-CeEEcCCchHHHHHHHH
Q 018243 3 TRTVDLRSDTVTKP-TEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVM----GK-----E-AGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~-----~-~~~~~~~gt~a~~~~l~ 71 (359)
..+|||.++.+..+ +|.+.+++.+.......|+...+..++++.+++++ |. + ..++++||++++..++.
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~ 109 (396)
T 3jtx_A 30 MEAVPLHIGEPKHPTPKVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQ 109 (396)
T ss_dssp CCCEECSCCSCCSCCCHHHHHHHHHTGGGGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHH
T ss_pred CCeEEeCCcCCCCCCCHHHHHHHHHHhhhccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHH
Confidence 45799999876654 48999999886644445665556778888888776 53 2 45777778889988888
Q ss_pred HhhhhcC-----CeEEecCCCcceeeccccccccCCccceeeecCCC-CCCCHHHHHHHhcCCCCCccCCceeEEEEecc
Q 018243 72 VHCETRG-----SEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQD-GTMDIDLIEAAIRDPKGEIVYPTTRLICLENT 145 (359)
Q Consensus 72 ~~~~~~g-----~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~ 145 (359)
.++ ++| ++|+++.|+|.+... .+...|.+++.++.+.+ +.+|+++|++.++ +++++|+++++
T Consensus 110 ~~~-~~g~~~~~d~vl~~~p~~~~~~~---~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~--------~~~~~v~l~~p 177 (396)
T 3jtx_A 110 TVL-NPVSDGIKPAIVSPNPFYQIYEG---ATLLGGGEIHFANCPAPSFNPDWRSISEEVW--------KRTKLVFVCSP 177 (396)
T ss_dssp HHC-CC---CCCCEEEEEESCCHHHHH---HHHHTTCEEEEEECCTTTCCCCGGGSCHHHH--------HTEEEEEEESS
T ss_pred HHh-CCCCccCCCEEEEcCCCcHhHHH---HHHHcCCEEEEeecCCCCCccCHHHHHHhhc--------cCcEEEEEECC
Confidence 887 475 799999999877554 36778989999987543 4679999999998 68999999755
Q ss_pred ccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHh----hh--cCccEEEEeccccCCCcee--eE
Q 018243 146 HANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRR----LV--QAADSASVCLSKGLGAPVG--SV 216 (359)
Q Consensus 146 ~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~----~~--~~~d~~~~s~~K~~g~~~g--g~ 216 (359)
+||||.+++.+++++|+++|++||+++|+||+|..+.... ...+... +. .+.++++.|+||.++.++. ||
T Consensus 178 -~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 256 (396)
T 3jtx_A 178 -NNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGF 256 (396)
T ss_dssp -CTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEE
T ss_pred -CCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEE
Confidence 6799999999999999999999999999999986543321 1111111 11 2445667799998876532 88
Q ss_pred EecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHH--HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEE
Q 018243 217 IVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVAL--QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYF 294 (359)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~ 294 (359)
+++++++++.+.......+.+. +...+.++..++ ....++.++++.++++.+.+.|++. +.+. .+..+.++|+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~-~~~~~~~~~~ 331 (396)
T 3jtx_A 257 VAGDAELLKNFLLYRTYHGSAM--SIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQV--FDVK-LPDASFYIWL 331 (396)
T ss_dssp EEECHHHHHHHHHHHHHHTCCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTT--SCCC-CCSSSSEEEE
T ss_pred EEeCHHHHHHHHHHHhhcccCC--CHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc--CCcc-CCCeeEEEEE
Confidence 8999999999887766655554 334444444445 3445557777888899999999876 3332 3457888999
Q ss_pred EeccchHHHHHHHHHHH-HhcCceeccC------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 295 EITEDSKLYAACLLKKL-EEHGVLVMPE------------SSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 295 ~~~~~~~~~~~~~~~~l-~~~gi~~~~~------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
.++. .+..++.+.| +++||.+.|+ +..++||+++ .+++++++++++|++++
T Consensus 332 ~~~~---~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 332 KVPD---GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALV--ADVATCVKAAEDIVSLY 395 (396)
T ss_dssp ECTT---SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECC--SCHHHHHHHHHHHHHHC
T ss_pred ECCC---CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 9875 2667888888 6789999664 3478999996 49999999999998865
No 42
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=9.3e-34 Score=252.64 Aligned_cols=331 Identities=13% Similarity=0.061 Sum_probs=241.1
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHHhhhhcCCeE
Q 018243 4 RTVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLVHCETRGSEV 81 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~~~~~~g~~v 81 (359)
..+.|.+.....+++.+.+++.+.......+...+...++++.+++++|.+ ..++++||++++..++..++ ++|++|
T Consensus 8 ~~~yl~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~-~~gd~V 86 (392)
T 2z9v_A 8 DPVITLTAGPVNAYPEVLRGLGRTVLYDYDPAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLI-SPDDVV 86 (392)
T ss_dssp CCSEECSSSCCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHC-CTTCCE
T ss_pred CcceeecCCCcCCCHHHHHHHhccccccccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhc-CCCCEE
Confidence 345666666677779999999886644322223456789999999999986 34777888999999999887 599999
Q ss_pred EecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHH
Q 018243 82 ILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDS 161 (359)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~ 161 (359)
++++++|++... ...+...|.+++.++.+.++.+|+++|++.+++. +++++|++++ ++||||.+++ +++
T Consensus 87 l~~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~------~~~~~v~~~~-~~nptG~~~~---l~~ 155 (392)
T 2z9v_A 87 LNLASGVYGKGF-GYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAH------PEITVVSVCH-HDTPSGTINP---IDA 155 (392)
T ss_dssp EEEESSHHHHHH-HHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHC------TTCCEEEEES-EEGGGTEECC---HHH
T ss_pred EEecCCcccHHH-HHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcC------CCCcEEEEec-cCCCCceecc---HHH
Confidence 999999876521 1234557889999988777889999999999521 4788888855 5569999988 789
Q ss_pred HHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHH--------
Q 018243 162 VGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRK-------- 232 (359)
Q Consensus 162 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~-------- 232 (359)
|.++|++||+++|+|++|+++... .....+ +.|+++.|+||+++++.| |++++++++++.++....
T Consensus 156 i~~l~~~~~~~li~D~a~~~g~~~---~~~~~~--~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~~~~~g~~~~~~~ 230 (392)
T 2z9v_A 156 IGALVSAHGAYLIVDAVSSFGGMK---THPEDC--KADIYVTGPNKCLGAPPGLTMMGVSERAWAKMKANPLAPRASMLS 230 (392)
T ss_dssp HHHHHHHTTCEEEEECTTTBTTBS---CCGGGG--TCSEEEECSSSTTCCCSCCEEEEECHHHHHHHHTCTTSCCSSTTC
T ss_pred HHHHHHHcCCeEEEEcccccCCcc---cccccc--cceEEEecCcccccCCCceeEEEECHHHHHHhhhccCCCCceecc
Confidence 999999999999999998765332 122222 578999999998876666 899999998887653210
Q ss_pred ---------hhCCC-cchhHHHHHHHHHHHH---Hh-HHHHhhhHHHHHHHHHHHHhcCCCceEecCCc---cceEEEEE
Q 018243 233 ---------TLGGG-MRQVGVLCAAALVALQ---EN-VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV---ETNIVYFE 295 (359)
Q Consensus 233 ---------~~~~~-~~~~~~~~~~~~~~l~---~~-~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~---~~~~~~~~ 295 (359)
..... ...+....++...+++ .. .++..+++.++++++.+.|+++ |+++..++. .++++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~ 309 (392)
T 2z9v_A 231 IVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GLSVWAASDSIASPTTTAVR 309 (392)
T ss_dssp SGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGGBCTTEEEEE
T ss_pred HHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CCeeccCCccccCCceEEEE
Confidence 00011 1112222222233332 22 4446777888999999999998 887754221 46678888
Q ss_pred eccchHHHHHHHHHHHHhc-CceeccC----CCcEEEEEeCC-CCCHHHHHHHHHHHHHHHHHHH
Q 018243 296 ITEDSKLYAACLLKKLEEH-GVLVMPE----SSTRVRIVVHH-QISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 296 ~~~~~~~~~~~~~~~l~~~-gi~~~~~----~~~~lRi~~~~-~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
++. +.+..++.++|.++ ||.+.++ ...++|+++.. .++++++++++++|+++++++.
T Consensus 310 ~~~--~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 310 TPD--GVDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp CCT--TCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred CCC--CCCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcC
Confidence 753 24677899999776 9999775 36789999643 7899999999999999998765
No 43
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=6.3e-34 Score=253.64 Aligned_cols=332 Identities=13% Similarity=0.055 Sum_probs=239.7
Q ss_pred ccccccCCCCCCh-HHHHHHHHHcCCCC-CCccCCC--hHHHHHHHHHHHHhCC----CCeEEcCCchHHHHHHHHHhhh
Q 018243 4 RTVDLRSDTVTKP-TEAMRAAMASAEVD-DDVLMHD--PTAFRLETEMAKVMGK----EAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 4 ~~id~~~~~~~~~-~~~~~~a~~~~~~~-~~~~~~~--~~~~~l~~~la~~~~~----~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.+|||..+.+..+ +|.+.+++.+.... ...|+.. +....+.+.+++.+|. +..++++||++++..++..++
T Consensus 28 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~- 106 (391)
T 3dzz_A 28 KELPMWIAEMDFKIAPEIMASMEEKLKVAAFGYESVPAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFT- 106 (391)
T ss_dssp TCEECCSSCCSSCCCHHHHHHHHHHHTTCCCCCBCCCHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHS-
T ss_pred CceeccccCCCCCCCHHHHHHHHHHHhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhC-
Confidence 5789988876654 48899988875433 2334332 2234444445555552 234677777899999999887
Q ss_pred hcCCeEEecCCCcceeeccccccccCCccceeeecC---CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018243 76 TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN---QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 76 ~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
++|++|+++.|+|.+... .+...|.+++.++.+ .++.+|+++|++.+++ +++++|+++++ +||||.
T Consensus 107 ~~gd~vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~~v~i~~p-~nptG~ 175 (391)
T 3dzz_A 107 SPGDQILVQEPVYNMFYS---VIEGNGRRVISSDLIYENSKYSVNWADLEEKLAT-------PSVRMMVFCNP-HNPIGY 175 (391)
T ss_dssp CTTCEEEECSSCCHHHHH---HHHHTTCEEEECCCEEETTEEECCHHHHHHHHTS-------TTEEEEEEESS-BTTTTB
T ss_pred CCCCeEEECCCCcHHHHH---HHHHcCCEEEEeeeeecCCceeecHHHHHHHHhc-------cCceEEEEECC-CCCCCc
Confidence 599999999999988654 367788899888763 2344899999999985 57899988665 669999
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhh-cCcc--EEEEeccccCCCce--eeEEecC-HHHHH
Q 018243 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLV-QAAD--SASVCLSKGLGAPV--GSVIVGS-KEFIK 225 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~-~~~d--~~~~s~~K~~g~~~--gg~~~~~-~~~~~ 225 (359)
+++.+++++|+++|++||+++|+|++|+.+.... ...+...+. ...| +++.|+||++|.++ .|+++.+ +++.+
T Consensus 176 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~ 255 (391)
T 3dzz_A 176 AWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRA 255 (391)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHH
T ss_pred ccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHH
Confidence 9999999999999999999999999986544321 112233332 1145 66779999997443 2778775 89988
Q ss_pred HHHHHHHhhCC-CcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhc-CCCceEecCCccceEEEEEeccch
Q 018243 226 KARRLRKTLGG-GMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQ-LKGLRVDVDAVETNIVYFEITEDS 300 (359)
Q Consensus 226 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~ 300 (359)
.++......+. +. +...++++..++ ..+.++.+++..++++++.+.|++ +|++.+. .+..+.++|+.++. .
T Consensus 256 ~~~~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~-~ 331 (391)
T 3dzz_A 256 RAEESFFLAGIGEP--NLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVL-DSNASYLAWVDISA-L 331 (391)
T ss_dssp HHHHHHHHHTCSSC--CTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEC-CCCBSSEEEEECGG-G
T ss_pred HHHHHHHhhccCCC--CHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEe-ccCceEEEEEehhh-c
Confidence 88766554332 22 223333444444 333555777788899999999999 8899875 34566778888875 2
Q ss_pred HHHHHHHHHHH-HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 301 KLYAACLLKKL-EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 301 ~~~~~~~~~~l-~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+.+..++.++| +++||.+.++. ..++|++++ .+++++++++++|+++++++
T Consensus 332 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 332 GMNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA--CPKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp CSCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC--SCHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 34788999999 59999997653 378999996 79999999999999998765
No 44
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=1.7e-33 Score=250.25 Aligned_cols=323 Identities=16% Similarity=0.115 Sum_probs=239.6
Q ss_pred ccccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC----eEEcCCchHHHHHHHHHhhhhcCCeE
Q 018243 6 VDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA----GLFVPSGTMGNLISVLVHCETRGSEV 81 (359)
Q Consensus 6 id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~----~~~~~~gt~a~~~~l~~~~~~~g~~v 81 (359)
+.|.. .+..++|++.+++.+.......+...+...++++.+++++|.+. .++++||++|+. ++..++ ++||+|
T Consensus 4 ~~~~~-gp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~-~~gd~v 80 (384)
T 3zrp_A 4 LLLHV-GPTTIKEDVLVAGLENNVGFTSKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLL-KPNDKI 80 (384)
T ss_dssp --CCS-SCSCCCHHHHHHTTCCSCCTTSHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGC-CTTCEE
T ss_pred eeccC-CCCCCCHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhc-CCCCEE
Confidence 33444 34455689999998865443333335667899999999999886 578888899999 888776 599999
Q ss_pred EecCCCccee-eccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHH
Q 018243 82 ILGDNSHIHI-YENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTD 160 (359)
Q Consensus 82 l~~~~~~~~~-~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~ 160 (359)
++++++|++. +. ..+...|.+++.++.+.++.+|++++++.+++ .++++|++++ ++||||.+.+ ++
T Consensus 81 i~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------~~~~~v~~~~-~~nptG~~~~---l~ 147 (384)
T 3zrp_A 81 LVVSNGVFGDRWE--QIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRK-------SEYKLVALTH-VETSTGVREP---VK 147 (384)
T ss_dssp EEECSSHHHHHHH--HHHTTSSCEEEEECCSTTCCCCHHHHHHHHHH-------SCEEEEEEES-EETTTTEECC---HH
T ss_pred EEecCCcchHHHH--HHHHHcCCcEEEecCCCCCCCCHHHHHHHHHh-------CCCcEEEEeC-CCCCCceECc---HH
Confidence 9999998653 22 33567899999998888888999999999983 3789999965 5569999988 89
Q ss_pred HHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHH------------
Q 018243 161 SVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKA------------ 227 (359)
Q Consensus 161 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~------------ 227 (359)
+|.++|++||+++|+|++|+++... ..... .+.|++++|+||+++++.| |+++.++++++.+
T Consensus 148 ~i~~l~~~~~~~li~D~a~~~~~~~---~~~~~--~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 222 (384)
T 3zrp_A 148 DVINKIRKYVELIVVDGVSSVGAEE---VKAEE--WNVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLD 222 (384)
T ss_dssp HHHHHHGGGEEEEEEECTTTTTTSC---CCTTT--TTCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTC
T ss_pred HHHHHHHhcCCEEEEECcccccCcc---ccccc--cCCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCccccc
Confidence 9999999999999999998665432 11222 2678999999999976666 8899999987776
Q ss_pred -HHHHHhh-------C---CCcchhHHHHHHHHHHH---H-HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCC---ccc
Q 018243 228 -RRLRKTL-------G---GGMRQVGVLCAAALVAL---Q-ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDA---VET 289 (359)
Q Consensus 228 -~~~~~~~-------~---~~~~~~~~~~~~~~~~l---~-~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~---~~~ 289 (359)
....... . ++. +.....+...++ . ...++..++..++++++.+.|+++ ++++..++ ..+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~g~~--~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~ 299 (384)
T 3zrp_A 223 LRNWLPVMRGAEEGKAAYFATP--PVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPESYSN 299 (384)
T ss_dssp HHHHHHHHHHHHTTCCCCSSCC--CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGGBCS
T ss_pred HHHHHHHHHhhcccCCCcCCCC--CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccccCc
Confidence 3222211 0 122 222222222233 2 224557778889999999999999 88875432 135
Q ss_pred eEEEEEeccchHHHHHHHHHHHHhcCceeccCCC---cEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 290 NIVYFEITEDSKLYAACLLKKLEEHGVLVMPESS---TRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~---~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
.++++.++. .+..++.+.|.++||.+.++.. .++|++++..++++++++++++|+++++++..
T Consensus 300 ~~~~~~~~~---~~~~~~~~~l~~~gi~v~~g~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~ 365 (384)
T 3zrp_A 300 TVTGVILKV---ADPQKVLAGTVNEGVEFAPGVHPAFKYFRIGHMGWVTPNDAIIAISVIERTLRKLGE 365 (384)
T ss_dssp SEEEEECSS---SCHHHHHHHHHTTTCCCEECCCTTCCEEEEECCSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred cEEEEECCC---CCHHHHHHHHHHCCEEEecCCCCCcCEEEEeccccCCHHHHHHHHHHHHHHHHHcCC
Confidence 677788775 3778999999888999977642 68999998889999999999999999988753
No 45
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=6.3e-34 Score=256.54 Aligned_cols=336 Identities=13% Similarity=0.089 Sum_probs=240.0
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCC------------CCCccCCChHHHHHHHHHHHHhC--------CC--CeEEcCC
Q 018243 4 RTVDLRSDTVTKPTEAMRAAMASAEV------------DDDVLMHDPTAFRLETEMAKVMG--------KE--AGLFVPS 61 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~------------~~~~~~~~~~~~~l~~~la~~~~--------~~--~~~~~~~ 61 (359)
.+|||+++....+.+.+.+++.+... ....|....+..++++.++++++ .+ ..++++|
T Consensus 37 ~~i~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G 116 (428)
T 1iay_A 37 GVIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGG 116 (428)
T ss_dssp SBEECSSCCCCSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEH
T ss_pred ceeeeccccchhhHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccC
Confidence 46899987766667788888885421 11235554557899999999986 32 3356666
Q ss_pred chHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeE
Q 018243 62 GTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRL 139 (359)
Q Consensus 62 gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 139 (359)
+++++..++.+++ ++|++|++++|+|.+... ......|.+++.++.+ .++.+|++++++.+++... ..+++++
T Consensus 117 ~~~ai~~~~~~~~-~~gd~Vl~~~p~y~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~--~~~~~~~ 191 (428)
T 1iay_A 117 ATGANETIIFCLA-DPGDAFLVPSPYYPAFNR--DLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQK--SNIKVKG 191 (428)
T ss_dssp HHHHHHHHHHHHC-CTTCEEEEESSCCTTHHH--HTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHH--TTCCEEE
T ss_pred hHHHHHHHHHHhC-CCCCeEEEccCCCcchHH--HHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHh--cCCceEE
Confidence 6788888888887 599999999999887554 2345778899888765 3457899999999873100 0036888
Q ss_pred EEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhcC-------cc--EEEEeccccC
Q 018243 140 ICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQA-------AD--SASVCLSKGL 209 (359)
Q Consensus 140 v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~~-------~d--~~~~s~~K~~ 209 (359)
|+++++ +||||.+++.+++++|+++|++||+++|+||+|..+.+... ..+...+... .| +++.|+||++
T Consensus 192 v~l~~p-~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~ 270 (428)
T 1iay_A 192 LILTNP-SNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDM 270 (428)
T ss_dssp EEEESS-CTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTS
T ss_pred EEEcCC-CCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhc
Confidence 888665 56999999999999999999999999999999865333211 1233344323 56 5667999999
Q ss_pred CCcee--eEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHH------hHHHHhhhHHHHHHHHHHHHhcCCCc
Q 018243 210 GAPVG--SVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQE------NVLVMLDGDHKKAKLLAEGLNQLKGL 280 (359)
Q Consensus 210 g~~~g--g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~l~~~l~~~~g~ 280 (359)
|.++- |+++. ++++++.++.....++ .+...+.++...++. +.++.++++.++++++.+.|+++ ++
T Consensus 271 g~~Glr~G~~~~~~~~~~~~~~~~~~~~~----~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 345 (428)
T 1iay_A 271 GLPGFRVGIIYSFNDDVVNCARKMSSFGL----VSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GI 345 (428)
T ss_dssp SCGGGCEEEEEESCHHHHHHHHHHHTTSC----CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred CCCCceEEEEEeCCHHHHHHHHHHHhccc----CCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 85432 77776 7888888775543322 233444444444432 34556677888899999999998 88
Q ss_pred eEecCCccceEEEEEeccc----hHHHHHHHHHHHHh-cCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018243 281 RVDVDAVETNIVYFEITED----SKLYAACLLKKLEE-HGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~-~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
++. ++..++++|+.++.. ...+..++.+.|.+ +||.+.+++ ..++||+++ ..+++++++++++|+++
T Consensus 346 ~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~~l~~~ 423 (428)
T 1iay_A 346 KCL-KNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA-NMDDGTVDIALARIRRF 423 (428)
T ss_dssp CBC-CCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS-SSCHHHHHHHHHHHHHH
T ss_pred ccc-CCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHH
Confidence 764 334788899998641 01245688899965 499997753 468999997 58999999999999988
Q ss_pred HHH
Q 018243 350 YAG 352 (359)
Q Consensus 350 ~~~ 352 (359)
+++
T Consensus 424 l~~ 426 (428)
T 1iay_A 424 VGV 426 (428)
T ss_dssp HHT
T ss_pred Hhc
Confidence 764
No 46
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=1.6e-34 Score=258.11 Aligned_cols=329 Identities=15% Similarity=0.147 Sum_probs=237.9
Q ss_pred cccccccCCCCCC-hHHHHHHHHHcCCCC-----CCccCCChHHHHHHHHHHHHh----C--C--CCeEEcCCchHHHHH
Q 018243 3 TRTVDLRSDTVTK-PTEAMRAAMASAEVD-----DDVLMHDPTAFRLETEMAKVM----G--K--EAGLFVPSGTMGNLI 68 (359)
Q Consensus 3 ~~~id~~~~~~~~-~~~~~~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~----~--~--~~~~~~~~gt~a~~~ 68 (359)
..+|||.++++.. |+|.+.+++.+.... ...|+...+..++++.+++++ | . +..++++||++++..
T Consensus 35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~ 114 (398)
T 3ele_A 35 ENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSI 114 (398)
T ss_dssp GGCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHH
T ss_pred CCeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHH
Confidence 3579999987764 458888888765433 234655666788888888876 3 2 234677778899999
Q ss_pred HHHHhhhhcC-CeEEecCCCcceeeccccccccCCccceeeecCC-CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018243 69 SVLVHCETRG-SEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ-DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 69 ~l~~~~~~~g-~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
++..++ ++| |+|+++.|+|.+... .+...|.+++.++.+. ++.+|+++|++.++ +++++|++++ +
T Consensus 115 ~~~~l~-~~g~d~vl~~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~-p 181 (398)
T 3ele_A 115 CFRALT-SDAYDEFITIAPYFPEYKV---FVNAAGARLVEVPADTEHFQIDFDALEERIN--------AHTRGVIINS-P 181 (398)
T ss_dssp HHHHHC-CSTTCEEEEESSCCTHHHH---HHHHTTCEEEEECCCTTTSSCCHHHHHHTCC--------TTEEEEEECS-S
T ss_pred HHHHHc-CCCCCEEEEeCCCchhhHH---HHHHcCCEEEEEecCCcCCcCCHHHHHHHhC--------cCCCEEEEcC-C
Confidence 999887 599 999999999877554 3677898999998764 56889999999998 6899999965 5
Q ss_pred cCCCceecChhhHHHHHHHHHH------cCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCce-e-eEEe
Q 018243 147 ANCGGRCLSVEYTDSVGEIAKK------HGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV-G-SVIV 218 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~------~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~-g-g~~~ 218 (359)
+||||.+++.+++++|+++|++ ||+++|+||+|..+.......+...-..+.++++.|+||++|.++ + ||++
T Consensus 182 ~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 261 (398)
T 3ele_A 182 NNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVL 261 (398)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEE
Confidence 6799999999999999999999 999999999976543321111111111133466669999998543 3 8888
Q ss_pred cCHHH------HHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEE
Q 018243 219 GSKEF------IKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIV 292 (359)
Q Consensus 219 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~ 292 (359)
+++++ .+.+.......+ ....+...+.++...++.. . .++++.++++++.+.|+++ ++++.. +..+.++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~-~-~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~ 336 (398)
T 3ele_A 262 VPDEVYDKAELYAAVCGAGRALG-YVCAPSLFQKMIVKCQGAT-G-DINAYKENRDLLYEGLTRI-GYHCFK-PDGAFYM 336 (398)
T ss_dssp CCTTSTTHHHHHHHHHHHHHHTT-CCCSCHHHHHHHTTCTTCC-C-CHHHHHHHHHHHHHHHHHH-TCCEEC-CSBSSEE
T ss_pred EcchhhhHHHHHHHHHHHhhhcc-ccCCCHHHHHHHHHHhcCH-H-HHHHHHHHHHHHHHHHHHc-CCeecC-CCeeEEE
Confidence 87663 333333333322 2222334444443333321 1 4566778889999999988 887753 4466779
Q ss_pred EEEeccchHHHHHHHHHHHHhcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 293 YFEITEDSKLYAACLLKKLEEHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
|+.++.. +..++.+.|.++||.+.++. .+++|++++ .+++++++++++|++++++++
T Consensus 337 ~~~~~~~---~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~~~~ 397 (398)
T 3ele_A 337 FVKALED---DSNAFCEKAKEEDVLIVAADGFGCPGWVRISYC--VDREMIKHSMPAFEKIYKKYN 397 (398)
T ss_dssp EEECSSS---CHHHHHHHHHTTTEECEESGGGTCTTEEEEECC--SCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEcCCC---CHHHHHHHHHHCCEEEeCccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Confidence 9988752 67789999999999997764 578999994 799999999999999998764
No 47
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=5.7e-34 Score=257.00 Aligned_cols=333 Identities=12% Similarity=-0.003 Sum_probs=245.3
Q ss_pred cccccccCCCC-CCh-HHHH--HHHHHcCCCC--CCccCCChHHHHHHHHHHHHh-----CCC--C---eEEcCCchHHH
Q 018243 3 TRTVDLRSDTV-TKP-TEAM--RAAMASAEVD--DDVLMHDPTAFRLETEMAKVM-----GKE--A---GLFVPSGTMGN 66 (359)
Q Consensus 3 ~~~id~~~~~~-~~~-~~~~--~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~-----~~~--~---~~~~~~gt~a~ 66 (359)
+.+|||..+.+ ..+ +|.+ .+++.+.... ...|+...+..++++.+++++ +.+ . .++++||++|+
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al 126 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGL 126 (430)
T ss_dssp TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHH
T ss_pred CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHHH
Confidence 35789999877 433 3555 7777665432 334655566899999999999 653 4 56777778899
Q ss_pred HHHHHHhhhhcCCeEEecCCCcceeecccccccc-CCccceeeecCC-CCCCCHHHHHHHhcCCCCCccCCceeEEEEec
Q 018243 67 LISVLVHCETRGSEVILGDNSHIHIYENGGISTI-GGVHPRTVKNNQ-DGTMDIDLIEAAIRDPKGEIVYPTTRLICLEN 144 (359)
Q Consensus 67 ~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~-~g~~~~~v~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~ 144 (359)
..++..++ ++||+|+++.|+|.+... .+.. .|.+++.++.+. ++.+|+++|++.+++.. .+++++++++
T Consensus 127 ~~~~~~l~-~~gd~Vl~~~p~y~~~~~---~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~-----~~~~~v~i~~ 197 (430)
T 2x5f_A 127 SLVGDLFV-NQDDTILLPEHNWGNYKL---VFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYN-----KDKVIMILNY 197 (430)
T ss_dssp HHHHHHHC-CTTCEEEEESSCCTHHHH---HHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCC-----SSEEEEEECS
T ss_pred HHHHHHHh-CCCCEEEEcCCcCccHHH---HHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcC-----CCCEEEEEcC
Confidence 99999887 599999999999887654 3666 788988887654 46789999999998310 2788888866
Q ss_pred cccCCCceecChhhHHHHHHHHHH-----cCcEEEEecccccchhhhc-CchhH-hhhc--Cc---cEEEEeccccCCCc
Q 018243 145 THANCGGRCLSVEYTDSVGEIAKK-----HGLKLHIDGARIFNAAVAL-GVPVR-RLVQ--AA---DSASVCLSKGLGAP 212 (359)
Q Consensus 145 ~~~~ptG~~~~~~~l~~i~~~~~~-----~~~~li~D~a~~~~~~~~~-~~~~~-~~~~--~~---d~~~~s~~K~~g~~ 212 (359)
+ +||||.+++.+++++|.++|++ ||+++|+|++|..+..... ..+.. .+.. +. ++++.|+||++|.+
T Consensus 198 p-~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 276 (430)
T 2x5f_A 198 P-NNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAW 276 (430)
T ss_dssp S-CTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCG
T ss_pred C-CCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCC
Confidence 6 7799999999999999999999 9999999999765433211 12333 3321 23 35566999999855
Q ss_pred ee--eEEec---CHHHHHHHHHHHHh----hCCCcchhHHHHHHHHHHHH-H--hHHH---HhhhHHHHHHHHHHHHh--
Q 018243 213 VG--SVIVG---SKEFIKKARRLRKT----LGGGMRQVGVLCAAALVALQ-E--NVLV---MLDGDHKKAKLLAEGLN-- 275 (359)
Q Consensus 213 ~g--g~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~-~--~~~~---~~~~~~~~~~~l~~~l~-- 275 (359)
+- |++++ ++++.+.+...... ...+. +...++++..+++ . +.++ .++++.++++++.+.|+
T Consensus 277 G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 354 (430)
T 2x5f_A 277 GFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSG--PLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYAD 354 (430)
T ss_dssp GGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSC--CHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCG
T ss_pred CCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCC--ChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 32 88888 99998888765543 22233 4444455555554 2 2332 66677788899999998
Q ss_pred --cCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHh-cCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 276 --QLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEE-HGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 276 --~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
+. ++++. ++..+.++|+.++. .+..++.+.|.+ +||.+.+++.+++|++++. .+++++++++++|++++++
T Consensus 355 ~~~~-g~~~~-~~~~g~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~~~iRis~~~-~~~e~i~~~~~~l~~~l~~ 428 (430)
T 2x5f_A 355 QYHS-HWQAY-DFNSGYFMAIKVHD---VDPEALRKHLIDKYSIGVIALNATDIRIAFSC-VEKDDIPHVFDSIAKAIDD 428 (430)
T ss_dssp GGTT-TEEEC-CCCBSSEEEEEESS---SCHHHHHHHHHHHHCEECEECSSSEEEEEGGG-SCGGGHHHHHHHHHHHHHH
T ss_pred CCCC-Cceee-CCCceEEEEeCCCC---CCHHHHHHHHHHhCCEEEecCCCCeEEEEEec-CCHHHHHHHHHHHHHHHHh
Confidence 55 77764 34456779998873 367789999976 9999999877899999973 6999999999999999876
Q ss_pred H
Q 018243 353 V 353 (359)
Q Consensus 353 ~ 353 (359)
+
T Consensus 429 ~ 429 (430)
T 2x5f_A 429 L 429 (430)
T ss_dssp H
T ss_pred c
Confidence 5
No 48
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=1.9e-33 Score=249.81 Aligned_cols=330 Identities=13% Similarity=0.062 Sum_probs=241.6
Q ss_pred cccccccCCCCCCh-HHHHHHHHHcCCCC-CCccC--CChHHHHHHHHHHHHhCC----CCeEEcCCchHHHHHHHHHhh
Q 018243 3 TRTVDLRSDTVTKP-TEAMRAAMASAEVD-DDVLM--HDPTAFRLETEMAKVMGK----EAGLFVPSGTMGNLISVLVHC 74 (359)
Q Consensus 3 ~~~id~~~~~~~~~-~~~~~~a~~~~~~~-~~~~~--~~~~~~~l~~~la~~~~~----~~~~~~~~gt~a~~~~l~~~~ 74 (359)
..+|||.++.+..+ +|.+.+++.+.... ...|+ ..+....+++.+++.+|. +..++++||++++..++..++
T Consensus 24 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~ 103 (383)
T 3kax_A 24 EELIHAWIADMDFEVPQPIQTALKKRIEHPIFGYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFT 103 (383)
T ss_dssp SCCEECCCSSCSSCCCHHHHHHHHHHHHSCCCCCCCCCTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHC
T ss_pred CCeeecccccCCCCCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhC
Confidence 46799998766554 58888888775432 23343 244556777777777772 234777888889999998887
Q ss_pred hhcCCeEEecCCCcceeeccccccccCCccceeeecCCC---CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018243 75 ETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQD---GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 75 ~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~---~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
++|++|+++.|+|.+... .+...|.+++.++.+.+ +.+|+++|++.++ +++++|++++ ++||||
T Consensus 104 -~~gd~vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~--------~~~~~v~i~~-p~nptG 170 (383)
T 3kax_A 104 -KENESVLVQPPIYPPFFE---MVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQ--------QGVKLMLLCS-PHNPIG 170 (383)
T ss_dssp -CTTCEEEECSSCCHHHHH---HHHHTTCEEEECCCEEETTEEECCHHHHHHHHT--------TTCCEEEEES-SBTTTT
T ss_pred -CCCCEEEEcCCCcHHHHH---HHHHcCCEEEeccceecCCcEEEcHHHHHHHhC--------cCCeEEEEeC-CCCCCC
Confidence 599999999999888664 36778889988876532 4489999999996 7899998866 466999
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhc---CccEEEEeccccCCCce-e-eEEec-CHHHH
Q 018243 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQ---AADSASVCLSKGLGAPV-G-SVIVG-SKEFI 224 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~---~~d~~~~s~~K~~g~~~-g-g~~~~-~~~~~ 224 (359)
.++|.+++++|+++|++||+++|+|++|..+..... ..+...+.. +..+++.|+||.+|.++ + |+++. ++++.
T Consensus 171 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 250 (383)
T 3kax_A 171 RVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLR 250 (383)
T ss_dssp BCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHH
T ss_pred cCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHH
Confidence 999999999999999999999999999865443211 122333321 33366679999998543 2 77777 78888
Q ss_pred HHHHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhc-CCCceEecCCccceEEEEEeccch
Q 018243 225 KKARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQ-LKGLRVDVDAVETNIVYFEITEDS 300 (359)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~ 300 (359)
+.++......+.. ..+...++++..+++ ++.++.+++..++++++.+.|++ +|++++. .+..+.++|+.++. .
T Consensus 251 ~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~-~ 327 (383)
T 3kax_A 251 QAFTSIQYRQGFH-GLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVM-KPEGSFLLWIDCSA-L 327 (383)
T ss_dssp HHHHHHHHHTTCC-CCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEC-CCSBSSEEEEECGG-G
T ss_pred HHHHHHHhhcccC-CCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEe-cCCceEEEEEEccc-c
Confidence 8887766554431 224444455555553 33555677788899999999998 7898875 34466677788875 2
Q ss_pred HHHHHHHHHHHH-hcCceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 301 KLYAACLLKKLE-EHGVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 301 ~~~~~~~~~~l~-~~gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
+.+..++.+.|. ++||.+.++ +..++|++++ .+++++++++++|++++
T Consensus 328 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 328 NLSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIG--CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp CCCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECS--SCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 347889999996 799999764 2478999996 68999999999998876
No 49
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=5.8e-33 Score=250.72 Aligned_cols=337 Identities=11% Similarity=0.072 Sum_probs=242.6
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCCC-------------CccCCChHHHHHHHHHHHHhC----------CCCeEEcCC
Q 018243 5 TVDLRSDTVTKPTEAMRAAMASAEVDD-------------DVLMHDPTAFRLETEMAKVMG----------KEAGLFVPS 61 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~~-------------~~~~~~~~~~~l~~~la~~~~----------~~~~~~~~~ 61 (359)
+|+|..+....+++.+.+++.+..... ..|+..++..++++.++++++ .+..++++|
T Consensus 40 ~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~g 119 (435)
T 3piu_A 40 IIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAG 119 (435)
T ss_dssp BEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEH
T ss_pred eEEeccccccccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCC
Confidence 567777777788899999998754321 236666677999999999998 334578888
Q ss_pred chHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeE
Q 018243 62 GTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRL 139 (359)
Q Consensus 62 gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~ 139 (359)
|++|+..++..++ ++|+.|+++.|+|.+... .+....|.+++.++.+. ++.+|+++|++.+++.... ..++++
T Consensus 120 g~~a~~~~~~~l~-~~gd~vl~~~p~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~--~~~~~~ 194 (435)
T 3piu_A 120 ATSANETFIFCLA-DPGEAVLIPTPYYPGFDR--DLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKR--NLRVKG 194 (435)
T ss_dssp HHHHHHHHHHHHC-CTTCEEEEEESCCTTHHH--HTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHT--TCCEEE
T ss_pred hHHHHHHHHHHhc-CCCCeEEECCCccccHHH--HHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhc--CCCeEE
Confidence 8899999999988 599999999999888665 22336788999987764 3568999999999731100 037889
Q ss_pred EEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhcC---------cc--EEEEeccc
Q 018243 140 ICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQA---------AD--SASVCLSK 207 (359)
Q Consensus 140 v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~~---------~d--~~~~s~~K 207 (359)
|+++++ +||||.+++.+++++|+++|++||+++|+||+|..+.+... ..+...+... .| +++.|+||
T Consensus 195 v~i~~p-~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK 273 (435)
T 3piu_A 195 VLVTNP-SNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSK 273 (435)
T ss_dssp EEEESS-CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSS
T ss_pred EEEcCC-CCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeec
Confidence 988776 56999999999999999999999999999999865433311 1222222221 23 55669999
Q ss_pred cCCCce-e-eEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHH------HHhHHHHhhhHHHHHHHHHHHHhcCC
Q 018243 208 GLGAPV-G-SVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVAL------QENVLVMLDGDHKKAKLLAEGLNQLK 278 (359)
Q Consensus 208 ~~g~~~-g-g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~~~~~~~~~~~l~~~l~~~~ 278 (359)
.||.++ . |++++ ++.+.+.++........+ +...+++...+ +...++.++++.++++++.+.|++.
T Consensus 274 ~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 348 (435)
T 3piu_A 274 DLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVS----SQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS- 348 (435)
T ss_dssp SSCCGGGCEEEEEESCHHHHHHHHHHGGGSCCC----HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred ccCCCceeEEEEEeCCHHHHHHHHHHhhcCCCC----HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 998543 2 77777 677777776554443222 22222222222 2234446677888899999999998
Q ss_pred CceEecCCccceEEEEEeccch----HHHHHHHHHHHHh-cCceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHH
Q 018243 279 GLRVDVDAVETNIVYFEITEDS----KLYAACLLKKLEE-HGVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 279 g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~-~gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
|+++. .+..++++|+.++... ..+..++.++|.+ +||.+.++ ++.++||+++. .+++++++++++|+
T Consensus 349 g~~~~-~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~e~i~~~l~~l~ 426 (435)
T 3piu_A 349 GISCL-NGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFAN-LPERTLDLAMQRLK 426 (435)
T ss_dssp TCEEC-CCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSS-SCHHHHHHHHHHHH
T ss_pred CCccc-CCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeC-CCHHHHHHHHHHHH
Confidence 88875 3446689999987520 1145678888855 49999764 45789999963 39999999999999
Q ss_pred HHHHHHH
Q 018243 348 KIYAGVC 354 (359)
Q Consensus 348 ~~~~~~~ 354 (359)
++++++.
T Consensus 427 ~~l~~~~ 433 (435)
T 3piu_A 427 AFVGEYY 433 (435)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9998764
No 50
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=100.00 E-value=6.5e-34 Score=250.63 Aligned_cols=335 Identities=19% Similarity=0.250 Sum_probs=239.4
Q ss_pred cccccccCCCCCChHHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHhCCCC--eEEcCCchHHHHHHHHHhhhhcCC
Q 018243 3 TRTVDLRSDTVTKPTEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVMGKEA--GLFVPSGTMGNLISVLVHCETRGS 79 (359)
Q Consensus 3 ~~~id~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l~~~~~~~g~ 79 (359)
+.+|+|+++....++|.+.+++.+.... ...++..+...++++.+++++|.+. .++++||++|+..++..++ ++|+
T Consensus 13 p~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~-~~gd 91 (359)
T 1svv_A 13 PKPYSFVNDYSVGMHPKILDLMARDNMTQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLAL-RPWE 91 (359)
T ss_dssp --CEECSCSCSSCCCHHHHHHHHHHTTCCCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHC-CTTE
T ss_pred CeeEEecCCCcCCCCHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHh-CCCC
Confidence 5679999988887789999999886543 2234456778899999999999764 4778899999999999987 5899
Q ss_pred eEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhH
Q 018243 80 EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYT 159 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l 159 (359)
+|++++++|.+.... ..+...|.+++.++.+ ++.+|+++|++.+++... .+..++++|+++++ + |||.++|.+++
T Consensus 92 ~vl~~~~~~~~~~~~-~~~~~~g~~~~~v~~~-~~~~d~~~l~~~l~~~~~-~~~~~~~~v~~~~~-~-ptG~~~~~~~l 166 (359)
T 1svv_A 92 AVIATQLGHISTHET-GAIEATGHKVVTAPCP-DGKLRVADIESALHENRS-EHMVIPKLVYISNT-T-EVGTQYTKQEL 166 (359)
T ss_dssp EEEEETTSHHHHSST-THHHHTTCCEEEECCT-TSCCCHHHHHHHHHHSCS-TTSCEEEEEEEESS-C-TTSCCCCHHHH
T ss_pred EEEEcccchHHHHHH-HHHhcCCCeeEEEeCC-CCeecHHHHHHHHHHHHh-ccCCCceEEEEEcC-C-CCceecCHHHH
Confidence 999999999887652 1356778899999875 788999999999984100 00124899999776 4 89999999999
Q ss_pred HHHHHHHHHcCcEEEEecccccchhhhcCchhHh--hhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHHhhCC
Q 018243 160 DSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRR--LVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRKTLGG 236 (359)
Q Consensus 160 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~--~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~~~ 236 (359)
++|.++|++||+++|+|++|........+..... +....|++++|++|+ |++.| |+++.++++.+.++......+.
T Consensus 167 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~-g~~~~~g~l~~~~~~~~~~~~~~~~~~~ 245 (359)
T 1svv_A 167 EDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKA-GGMFGEALIILNDALKPNARHLIKQRGA 245 (359)
T ss_dssp HHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTT-TCSSCEEEEECSGGGCTTHHHHHHHTTC
T ss_pred HHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccC-CCCCceEEEEEcccHHHHHHHHHhcCCc
Confidence 9999999999999999999732211211211111 113678999999997 55667 8888888887776654322332
Q ss_pred CcchhHHHHHHHHHHHH-HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhc-
Q 018243 237 GMRQVGVLCAAALVALQ-ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEH- 314 (359)
Q Consensus 237 ~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 314 (359)
.........+.....++ ...++.++++.++++++.+.| +.+++++.. +..++++|+.++. ++.++|.++
T Consensus 246 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~-~~~~~~~~~~~~~-------~~~~~l~~~~ 316 (359)
T 1svv_A 246 LMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGL-EACGIRLAW-PSASNQLFPILEN-------TMIAELNNDF 316 (359)
T ss_dssp CCTTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHH-HHTTCCBSS-CCSSSEECBEEEH-------HHHHHHTTTE
T ss_pred ccccchhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh-ccCCeEEcc-CCccceEEEEcCH-------HHHHHHHHhc
Confidence 21111111111122232 223446777888999999999 556888743 4467788877652 788889777
Q ss_pred Cceecc---CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 315 GVLVMP---ESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 315 gi~~~~---~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
||.+.+ .+..++|++++...+++++++++++|+++++++
T Consensus 317 gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 317 DMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp ECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred CEEEEecccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 999844 245789999988899999999999999887654
No 51
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=4.4e-34 Score=251.93 Aligned_cols=318 Identities=14% Similarity=0.073 Sum_probs=237.3
Q ss_pred cccccccCCCC-CChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC--eEEcCCchHHHHHHHHHhhhhcCC
Q 018243 3 TRTVDLRSDTV-TKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA--GLFVPSGTMGNLISVLVHCETRGS 79 (359)
Q Consensus 3 ~~~id~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l~~~~~~~g~ 79 (359)
..+|||.++.+ ..++|.+.+++.+.......| ..+...++++.++++++.+. .++++||++++..++..+ +
T Consensus 26 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y-~~~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~-----d 99 (361)
T 3ftb_A 26 RELLDYSSNINPLGIPKSFLNNIDEGIKNLGVY-PDVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF-----E 99 (361)
T ss_dssp --CEETTCCCCTTCSCHHHHTTHHHHHHGGGSC-CCTTCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC-----S
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHHhcCC-CCccHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc-----C
Confidence 35799998844 445688888887754333344 34667999999999999643 466777888888887776 8
Q ss_pred eEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhH
Q 018243 80 EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYT 159 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l 159 (359)
+|+++.|+|.+... .++..|.+++.++.+.++.++++++++.++ + +++|+++++ +||||.+++.+++
T Consensus 100 ~vi~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~--------~-~~~v~i~~p-~nptG~~~~~~~l 166 (361)
T 3ftb_A 100 KILIIVPSYAEYEI---NAKKHGVSVVFSYLDENMCIDYEDIISKID--------D-VDSVIIGNP-NNPNGGLINKEKF 166 (361)
T ss_dssp EEEEEESCCTHHHH---HHHHTTCEEEEEECCTTSCCCHHHHHHHTT--------T-CSEEEEETT-BTTTTBCCCHHHH
T ss_pred cEEEecCChHHHHH---HHHHcCCeEEEeecCcccCCCHHHHHHhcc--------C-CCEEEEeCC-CCCCCCCCCHHHH
Confidence 99999999887654 367779999999888777889999999998 6 889988666 6699999999999
Q ss_pred HHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhc-Ccc-EEEEeccccCCCce-e-eEEe-cCHHHHHHHHHHHHhh
Q 018243 160 DSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQ-AAD-SASVCLSKGLGAPV-G-SVIV-GSKEFIKKARRLRKTL 234 (359)
Q Consensus 160 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~d-~~~~s~~K~~g~~~-g-g~~~-~~~~~~~~~~~~~~~~ 234 (359)
++|+++|++||+++|+|++|..+... ...+...... ..+ +++.|+||.+|.++ + |+++ .++++.+.++.....+
T Consensus 167 ~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~ 245 (361)
T 3ftb_A 167 IHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPW 245 (361)
T ss_dssp HHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCTT
T ss_pred HHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCCC
Confidence 99999999999999999998654442 1122222211 222 45569999998543 2 7777 8999988876544322
Q ss_pred CCCcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCce-EecCCccceEEEEEeccchHHHHHHHHHHH
Q 018243 235 GGGMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLR-VDVDAVETNIVYFEITEDSKLYAACLLKKL 311 (359)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (359)
..+...++++..+++ ++.++.+++..++++++.+.|+++|++. +. +..++++++.++. .+..++.+.|
T Consensus 246 ----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~l~~~l 316 (361)
T 3ftb_A 246 ----NINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVF--SPHANFVLCRLEN---ISGEKLYDSL 316 (361)
T ss_dssp ----CSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEE--CCSSSEEEEEESS---SCHHHHHHHH
T ss_pred ----CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceec--CCCCeEEEEEcCC---CCHHHHHHHH
Confidence 234455555555553 4455577778889999999999998888 54 3467888888875 3678899999
Q ss_pred HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 312 EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 312 ~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.++||.+.++. ..++|++++ ++++++++++.|+++.+.
T Consensus 317 ~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 317 LKEDIVIRRCCNFIGLDDSFVRFAIK---DEKKNTKFLRALKGVENN 360 (361)
T ss_dssp HTTTEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHHHT
T ss_pred HHCCeEEeeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHhc
Confidence 88899997753 578999984 788899999999887653
No 52
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=8.4e-34 Score=251.39 Aligned_cols=313 Identities=17% Similarity=0.122 Sum_probs=234.9
Q ss_pred HHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhC-C--CCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeecc
Q 018243 18 EAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMG-K--EAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYEN 94 (359)
Q Consensus 18 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~--~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~ 94 (359)
+++.+++.. ....|+..++..++++.++++++ . +..++++||++|+..++.+++ ++||+|+++.|+|.+...
T Consensus 46 ~~~~~~~~~---~~~~y~~~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~-~~gd~Vl~~~~~~~~~~~- 120 (375)
T 3op7_A 46 EDFYKKLQG---TKLNYGWIEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLI-EPGDHVISLYPTYQQLYD- 120 (375)
T ss_dssp HHHHHHHHT---SCCSSCCTTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEEEESSCTHHHH-
T ss_pred HHHHHHHhc---CCcCCCCCCChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhc-CCCCEEEEeCCCchhHHH-
Confidence 345555544 34457777788999999999974 2 345788888999999999887 599999999999988664
Q ss_pred ccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcE
Q 018243 95 GGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLK 172 (359)
Q Consensus 95 ~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~ 172 (359)
.+...|.+++.++.+ .++.+|+++|++.++ +++++|+++++ +||||.++|.+++++|.++|++||++
T Consensus 121 --~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~~-~nptG~~~~~~~l~~i~~la~~~~~~ 189 (375)
T 3op7_A 121 --IPKSLGAEVDLWQIEEENGWLPDLEKLRQLIR--------PTTKMICINNA-NNPTGAVMDRTYLEELVEIASEVGAY 189 (375)
T ss_dssp --HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCC--------TTCCEEEEESS-CTTTCCCCCHHHHHHHHHHHHTTTCE
T ss_pred --HHHHcCCEEEEEeccccCCCCCCHHHHHHhhc--------cCCeEEEEcCC-CCCCCCCCCHHHHHHHHHHHHHcCCE
Confidence 367788898888765 345589999999998 78999999655 56999999999999999999999999
Q ss_pred EEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee--eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHH
Q 018243 173 LHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALV 250 (359)
Q Consensus 173 li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (359)
+|+|++|..+... ........ .+.++++.|+||.+|.++. |++++++++.+.++......+.+. +...++++..
T Consensus 190 li~De~~~~~~~~-~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~ 265 (375)
T 3op7_A 190 ILSDEVYRSFSEL-DVPSIIEV-YDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRDYTMICA--GVFDDLVAQL 265 (375)
T ss_dssp EEEECCSCCCSSS-CCCCHHHH-CTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTTTGGGTTSCC--CHHHHHHHHH
T ss_pred EEEEccccccccc-CCCchhhh-cCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHHHHhhhccCC--CcHHHHHHHH
Confidence 9999997654332 11122222 2344667799999985432 888889999998876665544444 3344444444
Q ss_pred HHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHH-HhcCceeccCC----
Q 018243 251 ALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKL-EEHGVLVMPES---- 322 (359)
Q Consensus 251 ~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~~---- 322 (359)
+++ ...++.+++..++++++.+.|++.|++.+.. +..+.+.|+.++.+ .+..++.+.| .++||.+.++.
T Consensus 266 ~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~ll~~~gi~v~~g~~~~~ 342 (375)
T 3op7_A 266 ALAHYQEILERNRHILEENLAILDQWIEEEPLVSYIR-PAVVSTSFVKIAVD--MPMEDFCLQLLQEHGVLLVPGNRFER 342 (375)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECC-CSSSSCEEEEECCS--SCHHHHHHHHHHHHCEECEEGGGGTC
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHhhCCCceEec-CCCeEEEeEEcCCC--CCHHHHHHHHHHhCCEEEeChhhhCC
Confidence 453 3444455666788999999999988888743 44667778777642 3667888887 78999997764
Q ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 323 STRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 323 ~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
..++|++++ .+.+++++++++|.++++++.+
T Consensus 343 ~~~iRi~~~--~~~~~i~~~l~~l~~~l~~~~~ 373 (375)
T 3op7_A 343 DGYVRLGFA--CEQETLIKGLEKLSQFLRRFDK 373 (375)
T ss_dssp TTEEEECCC--SCHHHHHHHHHHHHHHHGGGC-
T ss_pred CCeEEEEec--CCHHHHHHHHHHHHHHHHHHhh
Confidence 578999985 5669999999999999988754
No 53
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=8.6e-34 Score=254.03 Aligned_cols=326 Identities=16% Similarity=0.156 Sum_probs=239.1
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCCC----Cc------cCCChHHHHHHHHHHHHhCC---CCeEEcCCchHHHHHHHH
Q 018243 5 TVDLRSDTVTKPTEAMRAAMASAEVDD----DV------LMHDPTAFRLETEMAKVMGK---EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~~----~~------~~~~~~~~~l~~~la~~~~~---~~~~~~~~gt~a~~~~l~ 71 (359)
+++|..+....+++.+.+++.+..... .. |...+...++++.++++++. +..++++||++|+..++.
T Consensus 24 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~ 103 (406)
T 1kmj_A 24 LAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVAN 103 (406)
T ss_dssp CEECCTTTCCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHH
Confidence 577777766655678888776643211 11 12356678999999999998 234777888899999999
Q ss_pred Hhh---hhcCCeEEecCCCcceeecc-ccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEecccc
Q 018243 72 VHC---ETRGSEVILGDNSHIHIYEN-GGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHA 147 (359)
Q Consensus 72 ~~~---~~~g~~vl~~~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~ 147 (359)
.+. .++|++|++++++|.+.+.. ...+...|.+++.++.+.++.+|+++|++.++ +++++|++++ ++
T Consensus 104 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~-~~ 174 (406)
T 1kmj_A 104 SWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD--------EKTRLLAITH-VS 174 (406)
T ss_dssp HTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCC--------TTEEEEEEES-BC
T ss_pred HhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhc--------cCCeEEEEeC-CC
Confidence 982 25899999999999876531 01245678899999887788899999999998 6889998855 55
Q ss_pred CCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHH
Q 018243 148 NCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKK 226 (359)
Q Consensus 148 ~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~ 226 (359)
||||.++| +++|.++|++||+++|+|++|+.+.. ......+ +.|+++.|+||.+| +.| |++++++++.+.
T Consensus 175 nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~---~~~~~~~--~~d~~~~s~~K~~g-~~G~G~~~~~~~~~~~ 245 (406)
T 1kmj_A 175 NVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHH---PVDVQAL--DCDFYVFSGHKLYG-PTGIGILYVKEALLQE 245 (406)
T ss_dssp TTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTS---CCCHHHH--TCSEEEEEGGGTTS-CTTCEEEEECHHHHHH
T ss_pred ccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCC---CCccccc--CCCEEEEEchhccC-CCCcEEEEEeHHHHhh
Confidence 59999998 89999999999999999999876543 1222233 68899999999996 455 889899988877
Q ss_pred HHHHHHh---------------------hCCCcchhHHHHHHHH-HHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCc
Q 018243 227 ARRLRKT---------------------LGGGMRQVGVLCAAAL-VALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGL 280 (359)
Q Consensus 227 ~~~~~~~---------------------~~~~~~~~~~~~~~~~-~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~ 280 (359)
++..... +..++ +...+.++. .+++ ...+...++..++++++.+.|+++|++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 323 (406)
T 1kmj_A 246 MPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGT--PNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDL 323 (406)
T ss_dssp CCCSSCSTTSEEEEETTTEEEECCTTGGGCCSS--CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTE
T ss_pred cCCcccCCCceeecccccccccCCCchhccCCC--CCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 6432210 00111 223333322 3332 234446677888999999999998888
Q ss_pred eEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC------------CcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018243 281 RVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES------------STRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~------------~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
++..+...++++++.++. .+..++.+.|.++||.+.++. ..++|++++..++++++++++++|++
T Consensus 324 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~ 400 (406)
T 1kmj_A 324 TLYGPQNRLGVIAFNLGK---HHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQR 400 (406)
T ss_dssp EEESCTTCCSEEEEEETT---CCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred EEecCCCcCCEEEEEECC---CCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 875432146677777753 356788899999999987653 47899999888899999999999999
Q ss_pred HHHHH
Q 018243 349 IYAGV 353 (359)
Q Consensus 349 ~~~~~ 353 (359)
+++.+
T Consensus 401 ~~~~l 405 (406)
T 1kmj_A 401 IHRLL 405 (406)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 88765
No 54
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=5e-34 Score=256.84 Aligned_cols=330 Identities=14% Similarity=0.123 Sum_probs=243.9
Q ss_pred cccccccCCCCCC-hHHHHHHHHHcCCCCC---CccCCChHHHHHHHHHHHHhC------C---CCeEEcCCchHHHHHH
Q 018243 3 TRTVDLRSDTVTK-PTEAMRAAMASAEVDD---DVLMHDPTAFRLETEMAKVMG------K---EAGLFVPSGTMGNLIS 69 (359)
Q Consensus 3 ~~~id~~~~~~~~-~~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~------~---~~~~~~~~gt~a~~~~ 69 (359)
+..|||..+.+.. |+|.+.+++.+..... ..|+...+..++++.++++++ . +..++++||++++..+
T Consensus 28 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~ 107 (422)
T 3fvs_A 28 HDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTA 107 (422)
T ss_dssp SCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHH
T ss_pred CCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHH
Confidence 3578999987664 4588888887754332 346555667888888888876 2 2357777888899999
Q ss_pred HHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC------------CCCCCHHHHHHHhcCCCCCccCCce
Q 018243 70 VLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ------------DGTMDIDLIEAAIRDPKGEIVYPTT 137 (359)
Q Consensus 70 l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~------------~~~~~~~~l~~~l~~~~~~~~~~~~ 137 (359)
+..++ ++|++|+++.|+|.+... .+...|.+++.++.+. ++.+|++++++.++ +++
T Consensus 108 ~~~~~-~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~--------~~~ 175 (422)
T 3fvs_A 108 FQALV-DEGDEVIIIEPFFDCYEP---MTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFT--------SRT 175 (422)
T ss_dssp HHHHC-CTTCEEEEEESCCTTHHH---HHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCC--------TTE
T ss_pred HHHHc-CCCCEEEEcCCCchhhHH---HHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcC--------CCc
Confidence 98887 599999999999877553 3677888888887654 34689999999988 689
Q ss_pred eEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhc--CccEEEEeccccCCCce-
Q 018243 138 RLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQ--AADSASVCLSKGLGAPV- 213 (359)
Q Consensus 138 ~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~--~~d~~~~s~~K~~g~~~- 213 (359)
++|+++++ +||||.+++.+++++|+++|++||+++|+|++|..+.+... ..+...+.. +.++++.|+||.+|.++
T Consensus 176 ~~v~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~ 254 (422)
T 3fvs_A 176 KALVLNTP-NNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGW 254 (422)
T ss_dssp EEEEEESS-CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGG
T ss_pred eEEEECCC-CCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccc
Confidence 99999654 66999999999999999999999999999999865433211 112333321 23366669999998543
Q ss_pred e-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHH----------HhHHHHhhhHHHHHHHHHHHHhcCCCceE
Q 018243 214 G-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQ----------ENVLVMLDGDHKKAKLLAEGLNQLKGLRV 282 (359)
Q Consensus 214 g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 282 (359)
+ |++++++++++.+.........+. +...+.++..+++ .+.++.++++.++++++.+.|+++ |+.+
T Consensus 255 r~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 331 (422)
T 3fvs_A 255 KVGWVLGPDHIMKHLRTVHQNSVFHC--PTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV-GLKP 331 (422)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCC--CHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTT-TCEE
T ss_pred eEEEEEeCHHHHHHHHHHHhhccCCC--CcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHc-CCee
Confidence 3 889999999988876655444433 3344444444443 344557777888999999999998 8887
Q ss_pred ecCCccceEEEEEeccchHHH------------HHHHHHHH-HhcCceeccCC-----------CcEEEEEeCCCCCHHH
Q 018243 283 DVDAVETNIVYFEITEDSKLY------------AACLLKKL-EEHGVLVMPES-----------STRVRIVVHHQISAND 338 (359)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l-~~~gi~~~~~~-----------~~~lRi~~~~~~~~~~ 338 (359)
.. +..++++|+.++.. ... ..++.+.| .++||.+.+++ .+++|++++ .++++
T Consensus 332 ~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~--~~~e~ 407 (422)
T 3fvs_A 332 II-PQGSYFLITDISDF-KRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFV--KDEAT 407 (422)
T ss_dssp EB-CSBSSEEEEECHHH-HHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECC--CCHHH
T ss_pred cC-CCeeeEEEEechhh-cccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEec--CCHHH
Confidence 54 46888999988651 110 45777776 67899987643 568999985 59999
Q ss_pred HHHHHHHHHHHHHH
Q 018243 339 VHYTLSCFQKIYAG 352 (359)
Q Consensus 339 i~~~~~~l~~~~~~ 352 (359)
+++++++|++++++
T Consensus 408 i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 408 LQAMDEKLRKWKVE 421 (422)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998764
No 55
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=8.4e-34 Score=250.93 Aligned_cols=315 Identities=14% Similarity=0.130 Sum_probs=235.8
Q ss_pred ccccccCCCCCC-hHHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHhCC--------CCeEEcCCchHHHHHHHHHh
Q 018243 4 RTVDLRSDTVTK-PTEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVMGK--------EAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~~-~~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~~--------~~~~~~~~gt~a~~~~l~~~ 73 (359)
.+|||.++.+.. +++.+.+++.+.... ...|+..++..++++.++++++. +..++++||++++..++..+
T Consensus 30 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~ 109 (370)
T 2z61_A 30 KVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSI 109 (370)
T ss_dssp CCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHH
T ss_pred CEEEccCCCCCCCCCHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHh
Confidence 578999987754 457888888764422 33466556788999999999852 23578888899999999988
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee
Q 018243 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC 153 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~ 153 (359)
+ ++|++|++++|+|.+... .+...|.+++.++ +|+++|++.++ +++++|+++++ +||||.+
T Consensus 110 ~-~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~v~------~d~~~l~~~l~--------~~~~~v~~~~p-~nptG~~ 170 (370)
T 2z61_A 110 I-DDGDEVLIQNPCYPCYKN---FIRFLGAKPVFCD------FTVESLEEALS--------DKTKAIIINSP-SNPLGEV 170 (370)
T ss_dssp C-CTTCEEEEESSCCTHHHH---HHHHTTCEEEEEC------SSHHHHHHHCC--------SSEEEEEEESS-CTTTCCC
T ss_pred c-CCCCEEEEeCCCchhHHH---HHHHcCCEEEEeC------CCHHHHHHhcc--------cCceEEEEcCC-CCCcCcc
Confidence 7 599999999999887654 2667888888886 59999999998 67889888554 6699999
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh--hcCccEEEEeccccCCCce--eeEEecCHHHHHHHHH
Q 018243 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL--VQAADSASVCLSKGLGAPV--GSVIVGSKEFIKKARR 229 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~~d~~~~s~~K~~g~~~--gg~~~~~~~~~~~~~~ 229 (359)
++.+ |.++|++||+++|+|++|..+.......+...+ ..+.|+++.|+||++|.++ .|++++++++.+.++.
T Consensus 171 ~~~~----l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 246 (370)
T 2z61_A 171 IDRE----IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILK 246 (370)
T ss_dssp CCHH----HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHH
T ss_pred cCHH----HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHHHHHHHHH
Confidence 9954 999999999999999998654432112233333 1245677889999998554 3899999999998877
Q ss_pred HHHhhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHH
Q 018243 230 LRKTLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAA 305 (359)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (359)
.......+. +...+.++..+++ .+.++.++++.++++++.+.|+++ |+++.. +..+.++|+.++. +..
T Consensus 247 ~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~~----~~~ 318 (370)
T 2z61_A 247 LQQNLFISA--PTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF-GWEVNN-PIGAYYVFPNIGE----DGR 318 (370)
T ss_dssp HHHHHTSSS--CHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCCC-CCBTTEECCBCSS----CHH
T ss_pred HHhhcccCC--CHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecC-CCcceEEEEecCC----CHH
Confidence 666554444 3333444433442 334446677888899999999998 887643 4456778888764 466
Q ss_pred HHHHHHH-hcCceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018243 306 CLLKKLE-EHGVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 306 ~~~~~l~-~~gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
++.++|. ++||.+.++ +..++|++++ .+++++++++++|+++++
T Consensus 319 ~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~--~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 319 EFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA--NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp HHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC--SCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 8889995 899999775 2568999996 799999999999998875
No 56
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=4.8e-34 Score=256.44 Aligned_cols=333 Identities=15% Similarity=0.084 Sum_probs=238.0
Q ss_pred ccccccCCCC-----CChHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhC------------C--CCeEEcCCc
Q 018243 4 RTVDLRSDTV-----TKPTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMG------------K--EAGLFVPSG 62 (359)
Q Consensus 4 ~~id~~~~~~-----~~~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~------------~--~~~~~~~~g 62 (359)
.+|||.++.+ ..|++.+.+++.+.... ...|+..++..++++.++++++ . +..++++||
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~ 113 (416)
T 1bw0_A 34 PIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGG 113 (416)
T ss_dssp CCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHH
T ss_pred CeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCCh
Confidence 4789998764 45568888888765432 2346555678999999999998 2 234677777
Q ss_pred hHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEE
Q 018243 63 TMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLI 140 (359)
Q Consensus 63 t~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v 140 (359)
++++..++..++ ++|++|+++.|+|.+... .+...|.+++.++.+. ++.+|+++|++.++ ++++++
T Consensus 114 ~~al~~~~~~l~-~~gd~vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~--------~~~~~v 181 (416)
T 1bw0_A 114 SHGILMAITAIC-DAGDYALVPQPGFPHYET---VCKAYGIGMHFYNCRPENDWEADLDEIRRLKD--------DKTKLL 181 (416)
T ss_dssp HHHHHHHHHHHC-CTTCEEEEEESCCTHHHH---HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCC--------TTEEEE
T ss_pred HHHHHHHHHHhC-CCCCEEEEcCCCcHhHHH---HHHHcCcEEEEeecCcccCCCCCHHHHHHHhc--------cCCeEE
Confidence 888888888887 599999999999877553 3677888988887643 36689999999998 678888
Q ss_pred EEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-----CchhHhhhcCcc-EEEEeccccCCCce-
Q 018243 141 CLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-----GVPVRRLVQAAD-SASVCLSKGLGAPV- 213 (359)
Q Consensus 141 ~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-----~~~~~~~~~~~d-~~~~s~~K~~g~~~- 213 (359)
+++++ +||||.++|.+++++|+++|++||+++|+|++|....+... ..+...+....+ +++.|+||++++++
T Consensus 182 ~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Gl 260 (416)
T 1bw0_A 182 IVTNP-SNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGW 260 (416)
T ss_dssp EEESS-CTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGG
T ss_pred EEeCC-CCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCc
Confidence 88775 66999999999999999999999999999999865332211 012222221223 44559999987653
Q ss_pred -eeEEecCH--HHHHHH----HHHHHhhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceE
Q 018243 214 -GSVIVGSK--EFIKKA----RRLRKTLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRV 282 (359)
Q Consensus 214 -gg~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 282 (359)
.|++++++ ++.+.+ +..... ..+. +...++++..+++ .+.++.+++..++++++.+.|+++|++.+
T Consensus 261 r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 337 (416)
T 1bw0_A 261 RLGWLLYVDPHGNGPSFLEGLKRVGML-VCGP--CTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAP 337 (416)
T ss_dssp CCEEEEEECTTCSCHHHHHHHHHHHHH-HTCS--CHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred eEEEEEeeCchhhHHHHHHHHHHHhcc-ccCC--CcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 27777644 233332 222111 1222 3444555555553 34455677788899999999999888886
Q ss_pred ecCCccceEEEEEeccc---hHHHHHHHHHHH-HhcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 283 DVDAVETNIVYFEITED---SKLYAACLLKKL-EEHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 283 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l-~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
. .+..++++|+.++.. ...+..++.+.| .++||.+.++. .+++|+++ ..+++++++++++|.+++++..
T Consensus 338 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~--~~~~e~l~~~l~~l~~~l~~~~ 414 (416)
T 1bw0_A 338 T-MPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTT--TRPVEVYREAVERIKAFCQRHA 414 (416)
T ss_dssp C-CCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEEC--CSCHHHHHHHHHHHHHHHHHHB
T ss_pred c-CCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEe--cCCHHHHHHHHHHHHHHHHHhh
Confidence 4 345688899888631 012567888888 68999997753 56899999 4789999999999999998765
Q ss_pred h
Q 018243 355 E 355 (359)
Q Consensus 355 ~ 355 (359)
+
T Consensus 415 ~ 415 (416)
T 1bw0_A 415 A 415 (416)
T ss_dssp C
T ss_pred c
Confidence 4
No 57
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=4.7e-33 Score=248.67 Aligned_cols=334 Identities=11% Similarity=0.018 Sum_probs=240.9
Q ss_pred ccccccCCCCC-ChHHHHHHHHHcCCC-CCCccCCChHHHHHHHHHHHHh----C--C--CCeEEcCCchHHHHHHHHHh
Q 018243 4 RTVDLRSDTVT-KPTEAMRAAMASAEV-DDDVLMHDPTAFRLETEMAKVM----G--K--EAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~-~~~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~~----~--~--~~~~~~~~gt~a~~~~l~~~ 73 (359)
.+|||.++... .++|.+.+++.+... ....|... ..++++.+++++ | . +..++++||++|+..++.++
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l 109 (399)
T 1c7n_A 32 EVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREF 109 (399)
T ss_dssp TCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHH
T ss_pred CceeeeecCCCCCCCHHHHHHHHHHHhcCCCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHh
Confidence 67899888764 445888888876542 22334433 788888888875 5 2 23467777888999999988
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecC-CC--CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018243 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN-QD--GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~--~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
+ ++|++|+++.|+|.+... .+...|.+++.++.+ .+ +.+|+++|++.+++ +++++|++++ ++|||
T Consensus 110 ~-~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~-------~~~~~v~~~~-~~npt 177 (399)
T 1c7n_A 110 T-KPGDGVIIITPVYYPFFM---AIKNQERKIIECELLEKDGYYTIDFQKLEKLSKD-------KNNKALLFCS-PHNPV 177 (399)
T ss_dssp C-CTTCEEEECSSCCTHHHH---HHHTTTCEEEECCCEEETTEEECCHHHHHHHHTC-------TTEEEEEEES-SBTTT
T ss_pred c-CCCCEEEEcCCCcHhHHH---HHHHcCCEEEecccccCCCCEEEcHHHHHHHhcc-------CCCcEEEEcC-CCCCC
Confidence 7 589999999999888654 266778888888764 22 35899999999985 5788998855 57799
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhh---cCccEEEEeccccCCCce--eeEEecC-HHH
Q 018243 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLV---QAADSASVCLSKGLGAPV--GSVIVGS-KEF 223 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~---~~~d~~~~s~~K~~g~~~--gg~~~~~-~~~ 223 (359)
|.++|.+++++|+++|++||+++|+|++|..+..... ..+...+. .+.++++.|+||++|.++ .|+++++ +++
T Consensus 178 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 257 (399)
T 1c7n_A 178 GRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDI 257 (399)
T ss_dssp TBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHH
T ss_pred CcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHH
Confidence 9999999999999999999999999999865443211 12232221 133466679999998543 2778875 678
Q ss_pred HHHHHHHHHhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhc-CCCceEecCCccceEEEEEeccc
Q 018243 224 IKKARRLRKTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQ-LKGLRVDVDAVETNIVYFEITED 299 (359)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~ 299 (359)
.+.++.....++... .+...++++..++ ..+.++.++++.++++++.+.|++ +|++.+. ++..+.++|+.++.
T Consensus 258 ~~~l~~~~~~~~~~~-~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~- 334 (399)
T 1c7n_A 258 RERFTKSRDATSGMP-FTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAP-LIEGTYLQWIDFRA- 334 (399)
T ss_dssp HHHHHHHHHHTTCCC-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCC-CCSBSSEEEEECGG-
T ss_pred HHHHHHHHhhcccCC-CCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEe-cCCceEEEEEEccc-
Confidence 888877665553311 2334444444444 344555667788899999999998 7888764 34456667888864
Q ss_pred hHHHHHHHHHHHH-hcCceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 018243 300 SKLYAACLLKKLE-EHGVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCEE 356 (359)
Q Consensus 300 ~~~~~~~~~~~l~-~~gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 356 (359)
.+.+..++.+.|. ++||.+.++ +..++|++++ ..++++++++++|.++++++.++
T Consensus 335 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~l~~~l~~l~~~l~~~~~~ 396 (399)
T 1c7n_A 335 LKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLA--APSSVIQESLERLNKALKDLKNR 396 (399)
T ss_dssp GCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEec--cCHHHHHHHHHHHHHHHHHHHhc
Confidence 1235778999995 799999775 3468999996 45899999999999999887653
No 58
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=3.5e-33 Score=255.49 Aligned_cols=318 Identities=16% Similarity=0.162 Sum_probs=223.5
Q ss_pred CCccCCChHHHHHHHHHHHHhC------C--CCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCC
Q 018243 31 DDVLMHDPTAFRLETEMAKVMG------K--EAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGG 102 (359)
Q Consensus 31 ~~~~~~~~~~~~l~~~la~~~~------~--~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g 102 (359)
...|+..++..++++.++++++ . +..++++||++++..++..++..+||.|+++.|+|.+... .+...|
T Consensus 127 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~---~~~~~g 203 (500)
T 3tcm_A 127 TGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSA---SIALHG 203 (500)
T ss_dssp SSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHH---HHHHTT
T ss_pred CCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHH---HHHHcC
Confidence 3457777888999999998874 2 2347777788888888888873489999999999877553 377788
Q ss_pred ccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccc
Q 018243 103 VHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARI 180 (359)
Q Consensus 103 ~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~ 180 (359)
.+++.++.++ ++.+|+++|++.+++... ...++++|+++++ +||||.+++.+++++|+++|++||+++|+|++|.
T Consensus 204 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~--~~~~~k~ivl~~p-~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~ 280 (500)
T 3tcm_A 204 GALVPYYLNESTGWGLETSDVKKQLEDARS--RGINVRALVVINP-GNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQ 280 (500)
T ss_dssp CEEEEEECBTTTTSBCCHHHHHHHHHHHHH--TTCEEEEEEEESS-CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred CEEEEEecccccCCCCCHHHHHHHHHHHHh--cCCCceEEEEECC-CCCCcccCCHHHHHHHHHHHHHcCCEEEEecCcc
Confidence 8999887654 368899999999983100 0027889988765 6799999999999999999999999999999976
Q ss_pred cchhhh--cCchhHhh-------hcCccEEEE-eccccC-CCce--eeEEec---CHHHHHHHHHHHHhhCCCcchhHHH
Q 018243 181 FNAAVA--LGVPVRRL-------VQAADSASV-CLSKGL-GAPV--GSVIVG---SKEFIKKARRLRKTLGGGMRQVGVL 244 (359)
Q Consensus 181 ~~~~~~--~~~~~~~~-------~~~~d~~~~-s~~K~~-g~~~--gg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (359)
.+.+.. ...++..+ .....++++ |+||.| |.++ +||++. ++++++.+...... ..+.+.....
T Consensus 281 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~ 359 (500)
T 3tcm_A 281 ENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASV-NLCSNITGQI 359 (500)
T ss_dssp TCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHHT-TCCCCHHHHH
T ss_pred ccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHhc-ccCCCHHHHH
Confidence 544321 12232222 112234554 999998 5432 377776 88999888766542 2223222222
Q ss_pred HHHHHH-----------HHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHH----------H
Q 018243 245 CAAALV-----------ALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKL----------Y 303 (359)
Q Consensus 245 ~~~~~~-----------~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~----------~ 303 (359)
++.... .+....+..++++.++++++.+.|+++||+++. ++..+.++|+.+..+... +
T Consensus 360 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~lp~~~~~~~~~~g~~~ 438 (500)
T 3tcm_A 360 LASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCN-EAEGAMYVFPQICLPQKAIEAAKAANKAP 438 (500)
T ss_dssp HHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECC-CCCBTTEECCEECCCHHHHHHHHHHTSCH
T ss_pred HHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEe-cCCeEEEEeeeecCchhhHHHHHhcCCCc
Confidence 222221 122334446777889999999999999999875 455777888666532211 1
Q ss_pred HHHH-HHHHHhcCceeccCC-------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhhcC
Q 018243 304 AACL-LKKLEEHGVLVMPES-------STRVRIVVHHQISANDVHYTLSCFQKIYAGVCEENG 358 (359)
Q Consensus 304 ~~~~-~~~l~~~gi~~~~~~-------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~ 358 (359)
...+ .+.|.++||.++|+. ..++|+++. .+++++++++++|+++++++.++..
T Consensus 439 ~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~i~~l~~~~~~~~~~~~ 499 (500)
T 3tcm_A 439 DAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL--PQEDKIPAVISRFTVFHEAFMSEYR 499 (500)
T ss_dssp HHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC--SCTTTHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2233 355588999998753 346999996 8899999999999999999877653
No 59
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=4.5e-33 Score=248.11 Aligned_cols=329 Identities=12% Similarity=0.059 Sum_probs=237.6
Q ss_pred cccccccCCCCCCh-HHHHHHHHHcCCCC-CCccCC--ChHHHHHHHHHHHHhC--C--CCeEEcCCchHHHHHHHHHhh
Q 018243 3 TRTVDLRSDTVTKP-TEAMRAAMASAEVD-DDVLMH--DPTAFRLETEMAKVMG--K--EAGLFVPSGTMGNLISVLVHC 74 (359)
Q Consensus 3 ~~~id~~~~~~~~~-~~~~~~a~~~~~~~-~~~~~~--~~~~~~l~~~la~~~~--~--~~~~~~~~gt~a~~~~l~~~~ 74 (359)
..+|||.++.+..+ +|.+.+++.+.... ...|+. .+...++++.+++++| . +..++++||++++..++..++
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~ 111 (391)
T 4dq6_A 32 NDLLPMWVADMDFKAAPCIIDSLKNRLEQEIYGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELT 111 (391)
T ss_dssp SCSEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS
T ss_pred CCceeccccCCCCCCCHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhC
Confidence 35689998876644 48898888775433 223332 2344566666777777 2 235778888889999999887
Q ss_pred hhcCCeEEecCCCcceeeccccccccCCccceeeecC--C--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018243 75 ETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--Q--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 75 ~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
++|++|+++.|+|.+... .+...|.+++.++.+ . ++.+|++++++.++ + +++|+++++ +|||
T Consensus 112 -~~gd~vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~--------~-~~~v~i~~p-~npt 177 (391)
T 4dq6_A 112 -KANDKIMIQEPVYSPFNS---VVKNNNRELIISPLQKLENGNYIMDYEDIENKIK--------D-VKLFILCNP-HNPV 177 (391)
T ss_dssp -CTTCEEEECSSCCTHHHH---HHHHTTCEEEECCCEECTTSCEECCHHHHHHHCT--------T-EEEEEEESS-BTTT
T ss_pred -CCCCEEEEcCCCCHHHHH---HHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhh--------c-CCEEEEECC-CCCC
Confidence 599999999999888654 367788899988765 2 34589999999998 6 888888665 6699
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhc---CccEEEEeccccCCCce-e-eEEecC-HHH
Q 018243 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQ---AADSASVCLSKGLGAPV-G-SVIVGS-KEF 223 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~---~~d~~~~s~~K~~g~~~-g-g~~~~~-~~~ 223 (359)
|.+++.+++++|+++|++||+++|+|++|..+..... ..+...+.. ...+++.|+||++|.++ + |+++.+ +++
T Consensus 178 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~ 257 (391)
T 4dq6_A 178 GRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKD 257 (391)
T ss_dssp TBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHH
T ss_pred CcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHH
Confidence 9999999999999999999999999999865443211 112222211 22255669999997543 2 777775 488
Q ss_pred HHHHHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhc-CCCceEecCCccceEEEEEeccc
Q 018243 224 IKKARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQ-LKGLRVDVDAVETNIVYFEITED 299 (359)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~ 299 (359)
.+.++......+.. ..+...++++..+++ .+.++.+++..++++++.+.|++ +|++.+.. +..+.++|+.++.
T Consensus 258 ~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~- 334 (391)
T 4dq6_A 258 YKLLDDAFTRIDIK-RNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRK-PEGTYLLWVDFSA- 334 (391)
T ss_dssp HHHHHHHHHHTTCC-CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECC-CSBSSEEEEECGG-
T ss_pred HHHHHHHHHhhcCC-CCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecC-CCccEEEEEEhhh-
Confidence 88887665544322 123344444444443 33555677788899999999988 68998753 4466677788874
Q ss_pred hHHHHHHHHHHHHhc-CceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 300 SKLYAACLLKKLEEH-GVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 300 ~~~~~~~~~~~l~~~-gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
.+.+..++.+.|.++ ||.+.++ +..++|++++ .+++++++++++|++++
T Consensus 335 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 335 LGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA--CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp GCCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 124778999999776 9999764 3478999996 78999999999999876
No 60
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=4e-33 Score=244.95 Aligned_cols=317 Identities=13% Similarity=0.069 Sum_probs=231.4
Q ss_pred CCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCc
Q 018243 11 DTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLVHCETRGSEVILGDNSH 88 (359)
Q Consensus 11 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~ 88 (359)
..+..++|.+.+++.+.......+...+...++++.+++++|.+ ..++++||++|+..++.++. ++|++|+++.++|
T Consensus 7 ~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~-~~gd~vl~~~~~~ 85 (352)
T 1iug_A 7 PGPVRLHPKALEALARPQLHHRTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLF-APGERVLVPVYGK 85 (352)
T ss_dssp SSSCCCCHHHHHHHHSCCCCTTSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHC-CTTCEEEEEECSH
T ss_pred CCCCCCCHHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhcc-CCCCeEEEEeCCc
Confidence 34556669999999987644322333445789999999999987 34777889999999999987 5999999999998
Q ss_pred ceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHH
Q 018243 89 IHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKK 168 (359)
Q Consensus 89 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~ 168 (359)
++... ...+...|.+++.++.+.++.+|++++++ +++++|++++ ++||||.+++ +++|.++|++
T Consensus 86 ~~~~~-~~~~~~~g~~~~~v~~~~~~~~d~~~l~~-----------~~~~~v~~~~-~~nptG~~~~---l~~i~~l~~~ 149 (352)
T 1iug_A 86 FSERF-YEIALEAGLVVERLDYPYGDTPRPEDVAK-----------EGYAGLLLVH-SETSTGALAD---LPALARAFKE 149 (352)
T ss_dssp HHHHH-HHHHHHTTCEEEEEECCTTCCCCTTTSCC-----------SSCSEEEEES-EETTTTEECC---HHHHHHHHHH
T ss_pred hhHHH-HHHHHHcCCceEEEeCCCCCCCCHHHHhc-----------cCCcEEEEEE-ecCCcceecC---HHHHHHHHHh
Confidence 88641 12345578899999887777788876654 2567888854 5669999988 7899999999
Q ss_pred c--CcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHH---------HHHHH----H
Q 018243 169 H--GLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKK---------ARRLR----K 232 (359)
Q Consensus 169 ~--~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~---------~~~~~----~ 232 (359)
| |+++|+|++|+++... .....+ +.|+++.|+||+++++.| |+++.+++.++. ++... .
T Consensus 150 ~~~~~~li~D~a~~~~~~~---~~~~~~--~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (352)
T 1iug_A 150 KNPEGLVGADMVTSLLVGE---VALEAM--GVDAAASGSQKGLMCPPGLGFVALSPRALERLKPRGYYLDLARELKAQKE 224 (352)
T ss_dssp HCTTCEEEEECTTTBTTBC---CCSGGG--TCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTT
T ss_pred hCCCCEEEEECCccccCcc---eecccc--CeeEEEecCcccccCCCceeEEEECHHHHHHhhCCCceeeHHHHHhhccc
Confidence 9 9999999998765432 112222 578999999998776666 888888887654 22111 1
Q ss_pred hhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHH
Q 018243 233 TLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLK 309 (359)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (359)
....+ ..+.....++..++ +...++.++++.++++++.+.|+++ |+++..+...++++++.++. +.+..++.+
T Consensus 225 ~~~~~-~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 300 (352)
T 1iug_A 225 GESAW-TPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEG-GLRPVPKRFSPAVAAFYLPE--GVPYARVKE 300 (352)
T ss_dssp TCCSS-CCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSBCTTCEEEECCT--TCCHHHHHH
T ss_pred CCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccccccCCeEEEEEcCC--CCCHHHHHH
Confidence 11111 11222233333333 3334557778889999999999998 88875332256788888863 246778999
Q ss_pred HHHhcCceeccC----CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 310 KLEEHGVLVMPE----SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 310 ~l~~~gi~~~~~----~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.|.++||.+.++ +..++|++++...+++++++++++|+++++++
T Consensus 301 ~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 301 AFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp HHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHh
Confidence 998889999776 35789999987789999999999999998876
No 61
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=4.5e-33 Score=250.80 Aligned_cols=335 Identities=13% Similarity=0.059 Sum_probs=239.1
Q ss_pred ccccccCCCCCChH----HHHHHHH--HcCCCC----CCccCCChHHHHHHHHHHHHhCCCC-e-EEcCCchHHHH--HH
Q 018243 4 RTVDLRSDTVTKPT----EAMRAAM--ASAEVD----DDVLMHDPTAFRLETEMAKVMGKEA-G-LFVPSGTMGNL--IS 69 (359)
Q Consensus 4 ~~id~~~~~~~~~~----~~~~~a~--~~~~~~----~~~~~~~~~~~~l~~~la~~~~~~~-~-~~~~~gt~a~~--~~ 69 (359)
..|||..+.+.... +.+.+++ .+.... ...|+..++..++++.++++++.+. . ++++|+++++. .+
T Consensus 34 ~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~ 113 (427)
T 3ppl_A 34 LKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVI 113 (427)
T ss_dssp CCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHH
T ss_pred ceEecCCCCCChHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHH
Confidence 45889888766433 2466665 443322 2346666788999999999998763 3 45555556663 56
Q ss_pred HHHhhhh--c----------CCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCce
Q 018243 70 VLVHCET--R----------GSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTT 137 (359)
Q Consensus 70 l~~~~~~--~----------g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 137 (359)
+..++ . + ||+|++++|+|..... .++..|.+++.++.+.++ +|++.|++.+++ +++
T Consensus 114 ~~~l~-~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~---~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~-------~~~ 181 (427)
T 3ppl_A 114 SWSYI-FGNNDSVQPWSKEETVKWICPVPGYDRHFS---ITERFGFEMISVPMNEDG-PDMDAVEELVKN-------PQV 181 (427)
T ss_dssp HHHHH-HCCTTCSSCGGGSSCCEEEEEESCCHHHHH---HHHHTTCEEEEEEEETTE-ECHHHHHHHTTS-------TTE
T ss_pred HHHHh-ccCCcccccccCCCCCEEEEcCCCcHHHHH---HHHHcCCEEEEeCCCCCC-CCHHHHHHHHhc-------CCC
Confidence 66665 3 4 8999999999887554 377789999999877665 899999999953 689
Q ss_pred eEEEEeccccCCCceecChhhHHHHHHHH-HHcCcEEEEecccccchhhhcC---chhHhh-----hcCccEEEEecccc
Q 018243 138 RLICLENTHANCGGRCLSVEYTDSVGEIA-KKHGLKLHIDGARIFNAAVALG---VPVRRL-----VQAADSASVCLSKG 208 (359)
Q Consensus 138 ~~v~i~~~~~~ptG~~~~~~~l~~i~~~~-~~~~~~li~D~a~~~~~~~~~~---~~~~~~-----~~~~d~~~~s~~K~ 208 (359)
++|++.+.++||||.+++.+++++|+++| ++||++||+|++|....+...+ .+...+ ..+.++++.|+||+
T Consensus 182 ~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 261 (427)
T 3ppl_A 182 KGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI 261 (427)
T ss_dssp EEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT
T ss_pred eEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc
Confidence 99998778889999999999999999999 9999999999997643332212 123332 12334666699998
Q ss_pred CCCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHH------HHhHHHHhhhHHHHHHHHHHHHhc----C
Q 018243 209 LGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVAL------QENVLVMLDGDHKKAKLLAEGLNQ----L 277 (359)
Q Consensus 209 ~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~~~~~~~~~~~l~~~l~~----~ 277 (359)
++.+.+ ||++.++++++.+.......+.+.+... +.++...+ ....++.++.+.++++.+.+.|.+ +
T Consensus 262 ~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~--q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~ 339 (427)
T 3ppl_A 262 TLAGAGVSFFLTSAENRKWYTGHAGIRGIGPNKVN--QLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEY 339 (427)
T ss_dssp SCTTSSCEEEECCHHHHHHHHHHHHHHCSCCCHHH--HHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred cCcCccEEEEEcCHHHHHHHHHHhhcccCCCCHHH--HHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 543334 8999999999998877766555443332 33332222 233444555566666666666644 3
Q ss_pred CCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccC----------CCcEEEEEeCCCCCHHHHHHHHHHHH
Q 018243 278 KGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE----------SSTRVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 278 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----------~~~~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
+++.+. .+..++++|+.++.. +..++.+.|.++||.+.++ +.+++|++++ ..+++++++++++|.
T Consensus 340 ~~~~~~-~p~~g~~~~~~~~~~---~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~-~~~~~~i~~~~~~l~ 414 (427)
T 3ppl_A 340 GVAQWT-VPAGGYFISLDVVPG---TASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPS-LPPVEELEVAMDGVA 414 (427)
T ss_dssp TCCEEC-CCSBSSCEEEECSTT---CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCS-SSCHHHHHHHHHHHH
T ss_pred CceEEe-CCCccEEEEEECCcc---hHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECC-CCCHHHHHHHHHHHH
Confidence 346653 355789999999863 5778889999999999873 3578999996 348999999999999
Q ss_pred HHHHHHHhhc
Q 018243 348 KIYAGVCEEN 357 (359)
Q Consensus 348 ~~~~~~~~~~ 357 (359)
++++++..++
T Consensus 415 ~~l~~~~~~~ 424 (427)
T 3ppl_A 415 TCVLLAAAEH 424 (427)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999876543
No 62
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=2.6e-33 Score=252.19 Aligned_cols=336 Identities=15% Similarity=0.089 Sum_probs=237.9
Q ss_pred ccccccCCCCC---ChH-HHHHHHHH--cCCCC---CCcc-CCChHHHHHHHHHHHHhCCCC-e-EEcCCchHHHH--HH
Q 018243 4 RTVDLRSDTVT---KPT-EAMRAAMA--SAEVD---DDVL-MHDPTAFRLETEMAKVMGKEA-G-LFVPSGTMGNL--IS 69 (359)
Q Consensus 4 ~~id~~~~~~~---~~~-~~~~~a~~--~~~~~---~~~~-~~~~~~~~l~~~la~~~~~~~-~-~~~~~gt~a~~--~~ 69 (359)
..|||..+.+. +|. +.+.+++. +.... ...| +..++..++++.++++++.+. . ++++|+++++. .+
T Consensus 26 ~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~ 105 (423)
T 3ez1_A 26 LNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVL 105 (423)
T ss_dssp CCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHH
T ss_pred ceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHH
Confidence 46899998887 555 47888875 43321 2356 667788999999999998763 3 55555666775 66
Q ss_pred HHHhhhh-c---------CCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeE
Q 018243 70 VLVHCET-R---------GSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRL 139 (359)
Q Consensus 70 l~~~~~~-~---------g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 139 (359)
+..++.. + |++|+++.|+|..... .+...|.+++.++.+.++ +|+++|++.+++. +++++
T Consensus 106 ~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~------~~~~~ 175 (423)
T 3ez1_A 106 TFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFL---LLQTLGFELLTVDMQSDG-PDVDAVERLAGTD------PSVKG 175 (423)
T ss_dssp HHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHH---HHHHHTCEEEEEEEETTE-ECHHHHHHHHHSC------TTEEE
T ss_pred HHHHhccCCCccccccCCCCEEEEcCCCcHHHHH---HHHHcCCEEEeccCCCCC-CCHHHHHHHHhhC------CCceE
Confidence 6666631 5 5899999999877554 367788899999876654 8999999999521 68999
Q ss_pred EEEeccccCCCceecChhhHHHHHHHH-HHcCcEEEEecccccchhhh-c---CchhHhh-----hcCccEEEEeccccC
Q 018243 140 ICLENTHANCGGRCLSVEYTDSVGEIA-KKHGLKLHIDGARIFNAAVA-L---GVPVRRL-----VQAADSASVCLSKGL 209 (359)
Q Consensus 140 v~i~~~~~~ptG~~~~~~~l~~i~~~~-~~~~~~li~D~a~~~~~~~~-~---~~~~~~~-----~~~~d~~~~s~~K~~ 209 (359)
|++.+.++||||.+++.+++++|+++| ++||+++|+|++|....+.. . ..+...+ ..+.++++.|+||++
T Consensus 176 v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 255 (423)
T 3ez1_A 176 ILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKIT 255 (423)
T ss_dssp EEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTS
T ss_pred EEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhc
Confidence 988778888999999999999999999 99999999999986433221 1 1122222 113346666999975
Q ss_pred CCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHH-------HhHHHHhhhHHHHHHHHHHHH----hcC
Q 018243 210 GAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQ-------ENVLVMLDGDHKKAKLLAEGL----NQL 277 (359)
Q Consensus 210 g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------~~~~~~~~~~~~~~~~l~~~l----~~~ 277 (359)
+.+.+ ||++.++++++.++......+.+.+... +.++...++ ...++.++.+.++++.+.+.| .++
T Consensus 256 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~ 333 (423)
T 3ez1_A 256 FAGAGLGFVASSEDNIRWLSKYLGAQSIGPNKVE--QARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEG 333 (423)
T ss_dssp CSSSSCEEEEECHHHHHHHHHHHHHSCSCCCHHH--HHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred cCCcceEEEEeCHHHHHHHHHHHhhhccCCCHHH--HHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcC
Confidence 43334 8999999999998877766555443332 233322222 233334444445555555544 445
Q ss_pred C-CceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccC----------CCcEEEEEeCCCCCHHHHHHHHHHH
Q 018243 278 K-GLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE----------SSTRVRIVVHHQISANDVHYTLSCF 346 (359)
Q Consensus 278 ~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----------~~~~lRi~~~~~~~~~~i~~~~~~l 346 (359)
+ ++.+. .+..++++|+.++.. +.+.+.+.|.++||.+.++ +.+++||+++. .+++++++++++|
T Consensus 334 ~~~~~~~-~p~~g~~~~~~~~~~---~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~-~~~~~i~~~~~~l 408 (423)
T 3ez1_A 334 GEYATWT-LPKGGYFISLDTAEP---VADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTR-PPVEEVRTAMQVV 408 (423)
T ss_dssp TSSEEEC-CCSBSSCEEEEESSS---CHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSS-SCHHHHHHHHHHH
T ss_pred CCceEEe-CCCccEEEEEECCCC---cHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCC-CCHHHHHHHHHHH
Confidence 2 26653 456888999999863 5678888899999999872 24789999963 4999999999999
Q ss_pred HHHHHHHHhh
Q 018243 347 QKIYAGVCEE 356 (359)
Q Consensus 347 ~~~~~~~~~~ 356 (359)
+++++++..+
T Consensus 409 ~~~l~~~~~~ 418 (423)
T 3ez1_A 409 AACIRLATEE 418 (423)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987654
No 63
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=3.2e-33 Score=246.57 Aligned_cols=320 Identities=15% Similarity=0.078 Sum_probs=232.2
Q ss_pred ccccccCCCCC-ChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHHhhhhcCCe
Q 018243 4 RTVDLRSDTVT-KPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLVHCETRGSE 80 (359)
Q Consensus 4 ~~id~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~~~~~~g~~ 80 (359)
.+|||.++... +++|.+.+++.+.......|.. +...++++.++++++.+ ..++++||++++..++..+ +|++
T Consensus 25 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~~-~~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~~~~~~---~gd~ 100 (364)
T 1lc5_A 25 QLLDFSANINPLGMPVSVKRALIDNLDCIERYPD-ADYFHLHQALARHHQVPASWILAGNGETESIFTVASGL---KPRR 100 (364)
T ss_dssp GSEECSSCCCTTCCCHHHHHHHHHTGGGGGSCCC-TTCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHH---CCSE
T ss_pred ceEEeccccCCCCCCHHHHHHHHHHHHHhhcCCC-CCHHHHHHHHHHHHCcCHHHEEECCCHHHHHHHHHHHc---CCCe
Confidence 47899887653 4568999999886543334543 46789999999999975 3466677778888888777 5699
Q ss_pred EEecCCCcceeeccccccccCCccceeeecCCCCCCC-HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhH
Q 018243 81 VILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMD-IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYT 159 (359)
Q Consensus 81 vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l 159 (359)
|+++.|+|.+... .+...|.+++.++.+.+..++ ++++.+.++ +++++|+++++ +||||.++|.+++
T Consensus 101 vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~--------~~~~~v~i~~p-~nptG~~~~~~~l 168 (364)
T 1lc5_A 101 AMIVTPGFAEYGR---ALAQSGCEIRRWSLREADGWQLTDAILEALT--------PDLDCLFLCTP-NNPTGLLPERPLL 168 (364)
T ss_dssp EEEEESCCTHHHH---HHHHTTCEEEEEECCGGGTTCCCTTHHHHCC--------TTCCEEEEESS-CTTTCCCCCHHHH
T ss_pred EEEeCCCcHHHHH---HHHHcCCeEEEEeCCcccccchhHHHHHhcc--------CCCCEEEEeCC-CCCCCCCCCHHHH
Confidence 9999999887554 366778899888766422234 455666565 56788888666 6799999999999
Q ss_pred HHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh--cCccEEEEeccccCCCce--eeEEe-cCHHHHHHHHHHHHhh
Q 018243 160 DSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV--QAADSASVCLSKGLGAPV--GSVIV-GSKEFIKKARRLRKTL 234 (359)
Q Consensus 160 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d~~~~s~~K~~g~~~--gg~~~-~~~~~~~~~~~~~~~~ 234 (359)
++|+++|++||+++|+|++|..+... +.+..... .+.++++.|+||++|.++ .|+++ .++++.+.++.....
T Consensus 169 ~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~- 245 (364)
T 1lc5_A 169 QAIADRCKSLNINLILDEAFIDFIPH--ETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMP- 245 (364)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGSTT--CCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSCT-
T ss_pred HHHHHHhhhcCcEEEEECcChhhccC--ccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHhCCC-
Confidence 99999999999999999998654332 22222221 234567779999998543 28888 899998887665432
Q ss_pred CCCcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHH
Q 018243 235 GGGMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLE 312 (359)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (359)
+..+...++++..+++ .+.++.+++..++++++.+.|+++|++.+. +..++++++.++. +..++.+.|.
T Consensus 246 ---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~g~~~~~~~~~----~~~~l~~~l~ 316 (364)
T 1lc5_A 246 ---WSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVY--PGRANYLLLRCER----EDIDLQRRLL 316 (364)
T ss_dssp ---TCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEC--CCSSSEEEEEESC----TTCCHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEEC--CCCCeEEEEECCC----cHHHHHHHHH
Confidence 2234455555555553 345556667788899999999998888874 3467888888864 3457888998
Q ss_pred hcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 313 EHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 313 ~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
++||.+.++. ..++|+++. +++++++++++|+++++++.
T Consensus 317 ~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~~~~ 361 (364)
T 1lc5_A 317 TQRILIRSCANYPGLDSRYYRVAIR---SAAQNERLLAALRNVLTGIA 361 (364)
T ss_dssp TTTEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHC----
T ss_pred HCCcEEeeCcccCCCCCCEEEEEeC---CHHHHHHHHHHHHHHhhccc
Confidence 8999997753 468999984 68899999999999887653
No 64
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=9.5e-33 Score=246.82 Aligned_cols=327 Identities=19% Similarity=0.184 Sum_probs=236.3
Q ss_pred cccccCCCC-CC-hHHHHHHHHHcCCCC--------CCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhh
Q 018243 5 TVDLRSDTV-TK-PTEAMRAAMASAEVD--------DDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHC 74 (359)
Q Consensus 5 ~id~~~~~~-~~-~~~~~~~a~~~~~~~--------~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~ 74 (359)
++||.++.+ .. ++|.+.+++.+.... ...|+..+...++++.+++++|.+..+++++|++++..++..+.
T Consensus 48 ~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~~sG~~a~~~~~~~l~ 127 (401)
T 2bwn_A 48 ITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLR 127 (401)
T ss_dssp EEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHH
T ss_pred EEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEECCcHHHHHHHHHHHh
Confidence 578887655 32 457788887664321 11345567889999999999999888888999998887777654
Q ss_pred -hhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee
Q 018243 75 -ETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC 153 (359)
Q Consensus 75 -~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~ 153 (359)
..+|+.|+++.++|.+... . ++..|++++.++.+ |++++++.+++... +++++|++++ ++||||.+
T Consensus 128 ~~~~gd~Vl~~~~~~~~~~~-~--~~~~g~~~~~v~~~-----d~~~le~~l~~~~~----~~~~~v~~~~-~~nptG~~ 194 (401)
T 2bwn_A 128 VLFPGLIIYSDSLNHASMIE-G--IKRNAGPKRIFRHN-----DVAHLRELIAADDP----AAPKLIAFES-VYSMDGDF 194 (401)
T ss_dssp HHSTTCEEEEETTCCHHHHH-H--HHHSCCCEEEECTT-----CHHHHHHHHHHSCT----TSCEEEEEES-BCTTTCCB
T ss_pred cCCCCCEEEECchhhHHHHH-H--HHHcCCeEEEEcCC-----CHHHHHHHHHhhcc----CCceEEEEec-CcCCCCCc
Confidence 2489999999999988765 2 56788899888765 78899988873210 3678888855 55599999
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHh---hhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHH
Q 018243 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRR---LVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRL 230 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~---~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~ 230 (359)
++ +++|.++|++||+++|+|++|+.+.+...+..... +....++++.|+||.+|+ .||++++++++.+.++..
T Consensus 195 ~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~-~GG~~~~~~~~~~~l~~~ 270 (401)
T 2bwn_A 195 GP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGV-FGGYIAASARMVDAVRSY 270 (401)
T ss_dssp CC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCS-CCEEEEECHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccC-CCCEEecCHHHHHHHHHh
Confidence 88 89999999999999999999986554333322221 112357778899999996 457888899888887654
Q ss_pred HHhhCCCcchhHHHHHHHHHHHHHh----HHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHH
Q 018243 231 RKTLGGGMRQVGVLCAAALVALQEN----VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAAC 306 (359)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (359)
...+..+...++..++++..+++.. .++.+++..++++++.+.|+++ |+++.. ..++++++.++. +.+..+
T Consensus 271 ~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~--~~~~~~ 345 (401)
T 2bwn_A 271 APGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPIID--HGSHIVPVVIGD--PVHTKA 345 (401)
T ss_dssp CHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCC--CSSSCEEEECCC--HHHHHH
T ss_pred CcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCcccC--CCCCeEEEEeCC--hHHHHH
Confidence 3322222222334444444555321 2446777888999999999988 887753 245688888864 357788
Q ss_pred HHHHH-HhcCceeccC-------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 307 LLKKL-EEHGVLVMPE-------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 307 ~~~~l-~~~gi~~~~~-------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+.++| .++||.+.++ +..++|++++..++++++++++++|+++++++
T Consensus 346 ~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~~ 400 (401)
T 2bwn_A 346 VSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWARC 400 (401)
T ss_dssp HHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC---
T ss_pred HHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Confidence 99999 5899999654 23589999988889999999999999987654
No 65
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=4.9e-33 Score=249.98 Aligned_cols=332 Identities=13% Similarity=0.075 Sum_probs=237.1
Q ss_pred ccccccCCCC------CChHHHHHHHHHcCCC-CCCccCCChHHHHHHHHHHHHh----CCC---CeEEcCCchHHHHHH
Q 018243 4 RTVDLRSDTV------TKPTEAMRAAMASAEV-DDDVLMHDPTAFRLETEMAKVM----GKE---AGLFVPSGTMGNLIS 69 (359)
Q Consensus 4 ~~id~~~~~~------~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~~----~~~---~~~~~~~gt~a~~~~ 69 (359)
.+|||..+.+ ..+.+.+.+++.+... ....|+...+..++++.+++++ +.+ ..++++||++|+..+
T Consensus 39 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~ 118 (418)
T 3rq1_A 39 NVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHL 118 (418)
T ss_dssp GCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHH
T ss_pred CeEECCCCcccCCCCCccccHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHHHHHHH
Confidence 5688888854 3445889999877542 1234666667889999999877 344 457778888899999
Q ss_pred HHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeec-CCCCCCCHHHHHHHhcCCCCCccCCcee-EEEEecccc
Q 018243 70 VLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN-NQDGTMDIDLIEAAIRDPKGEIVYPTTR-LICLENTHA 147 (359)
Q Consensus 70 l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~v~i~~~~~ 147 (359)
+.+++ ++||+|+++.|+|.+... .+...|.+++.++. ++++.+|++.|++.+++... ++++ +++++++.+
T Consensus 119 ~~~l~-~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~----~~~~~~vi~~~p~~ 190 (418)
T 3rq1_A 119 IHNYT-EPGDEVLTADWYWGAYRV---ICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAA----KQTNVVVIFNTPGN 190 (418)
T ss_dssp HHHHS-CTTCEEEEESSCCTHHHH---HHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHH----HCSEEEEEEECSSC
T ss_pred HHHhc-CCCCEEEECCCCchhHHH---HHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhc----cCCCEEEEEeCCCC
Confidence 98887 599999999999877553 37788999999976 35578999999999972000 1455 666655537
Q ss_pred CCCceecChhhHHHHHHHHH------HcCcEEEEecccccchhhhcCchhHhhh---c--Ccc---EEEEeccccCCCce
Q 018243 148 NCGGRCLSVEYTDSVGEIAK------KHGLKLHIDGARIFNAAVALGVPVRRLV---Q--AAD---SASVCLSKGLGAPV 213 (359)
Q Consensus 148 ~ptG~~~~~~~l~~i~~~~~------~~~~~li~D~a~~~~~~~~~~~~~~~~~---~--~~d---~~~~s~~K~~g~~~ 213 (359)
||||.+++.+++++|+++|+ +||+++|+||+|.... +.+.....+. . ..+ +++.|+||.+|.++
T Consensus 191 NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G 268 (418)
T 3rq1_A 191 NPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYS--GEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYG 268 (418)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGS--SCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCS
T ss_pred CCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccc--CChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcC
Confidence 79999999999999999999 8999999999974322 2222222221 1 123 44559999998654
Q ss_pred e--eEEec---CHHHHHHHHHHHHhhC--CCcchhHHHHHHHHHHHHH---------hHHHHhhhHHHHHHHHHHHHhcC
Q 018243 214 G--SVIVG---SKEFIKKARRLRKTLG--GGMRQVGVLCAAALVALQE---------NVLVMLDGDHKKAKLLAEGLNQL 277 (359)
Q Consensus 214 g--g~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~---------~~~~~~~~~~~~~~~l~~~l~~~ 277 (359)
. ||+++ ++++++.+........ .....+...+.++...++. ..+..++++.++++++.+.|+++
T Consensus 269 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 348 (418)
T 3rq1_A 269 QRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV 348 (418)
T ss_dssp SCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2 88887 8999988876554321 1111233344444444421 12234566778889999999988
Q ss_pred CCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 278 KGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 278 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
|+++. ++..+.++|+.+. +..++.+.|.++||.+.|++ +++||++. .++++++++++++|+++++++.
T Consensus 349 -g~~~~-~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~v~~g~-~~iRis~~-~~~~~~i~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 349 -GLPML-PYRGGFFITIPTD-----SANAICEELKKEHIYVIALA-NGIRIAAC-GIPKCQMTGLAEKIYNAMKSLG 416 (418)
T ss_dssp -TCCCC-CCCSSSEEEEECT-----THHHHHHHHHHTTEECEECS-SEEEEEGG-GSCHHHHTTHHHHHHHHHHHTT
T ss_pred -CCCCC-CCCceEEEEcCCC-----CHHHHHHHHHhCCEEEecCC-CCeEEEEe-cCCHHHHHHHHHHHHHHHHHHh
Confidence 88774 3446667777664 45688888999999999874 67999986 5799999999999999998764
No 66
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=3.2e-33 Score=250.77 Aligned_cols=327 Identities=15% Similarity=0.087 Sum_probs=239.1
Q ss_pred cccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCe---EEcCCchHHHHHHHHHhhhhcCCeEEe
Q 018243 7 DLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAG---LFVPSGTMGNLISVLVHCETRGSEVIL 83 (359)
Q Consensus 7 d~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~---~~~~~gt~a~~~~l~~~~~~~g~~vl~ 83 (359)
-+.+..+..+++++.+++.+....+......+...++++.++++++.+.. ++++||++|+..++..++ ++||+|++
T Consensus 15 ~~~~pgp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~-~~gd~Vl~ 93 (411)
T 3nnk_A 15 LLMGPGPINADPRVLRAMSSQLIGQYDPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAI-RPGDKVLV 93 (411)
T ss_dssp EEESSSCCCCCHHHHHHHTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHC-CTTCEEEE
T ss_pred eeecCCCCCCCHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhc-CCCCEEEE
Confidence 34445566667999999988643332222235568999999999998753 556678999999999997 59999999
Q ss_pred cCCCccee-eccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHH
Q 018243 84 GDNSHIHI-YENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSV 162 (359)
Q Consensus 84 ~~~~~~~~-~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i 162 (359)
+.++|++. +. ..+...|.+++.++.+.++.+|+++|++.+++ .++++|+++++ +||||.+.+ +++|
T Consensus 94 ~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------~~~~~v~~~~~-~nptG~~~~---l~~i 160 (411)
T 3nnk_A 94 PVFGRFGHLLC--EIARRCRAEVHTIEVPWGEVFTPDQVEDAVKR-------IRPRLLLTVQG-DTSTTMLQP---LAEL 160 (411)
T ss_dssp EECSHHHHHHH--HHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH-------HCCSEEEEESE-ETTTTEECC---CTTH
T ss_pred ecCCchHHHHH--HHHHHcCCeEEEEecCCCCCCCHHHHHHHHhh-------CCCeEEEEeCC-CCCcceecc---HHHH
Confidence 99998763 32 33677899999999888888999999999983 37899999665 569999988 7899
Q ss_pred HHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHH---------
Q 018243 163 GEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRK--------- 232 (359)
Q Consensus 163 ~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~--------- 232 (359)
.++|++||+++|+|++|+++... ..... .++|+++.|+||+++++.| |+++.++++.+.++....
T Consensus 161 ~~l~~~~~~~li~Dea~~~~~~~---~~~~~--~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~ 235 (411)
T 3nnk_A 161 GEICRRYDALFYTDATASLGGNP---LETDV--WGLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDA 235 (411)
T ss_dssp HHHHHHHTCEEEEECTTTBTTBC---CCTTT--TTCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGGGCCTT
T ss_pred HHHHHHcCCEEEEECCcccCCcc---cchhc--cCCcEEEecCccccCCCCceEEEEECHHHHHHHhhcccccccccccc
Confidence 99999999999999998665432 11222 2688999999999766666 899999999888764320
Q ss_pred ------------------------hhCCC-cchhHHHHHHHHHHHH---H-hHHHHhhhHHHHHHHHHHHHhcCCCceEe
Q 018243 233 ------------------------TLGGG-MRQVGVLCAAALVALQ---E-NVLVMLDGDHKKAKLLAEGLNQLKGLRVD 283 (359)
Q Consensus 233 ------------------------~~~~~-~~~~~~~~~~~~~~l~---~-~~~~~~~~~~~~~~~l~~~l~~~~g~~~~ 283 (359)
..+.. ...+....++...+++ . ..++..++..++++++.+.|+++ ++++.
T Consensus 236 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 314 (411)
T 3nnk_A 236 HRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM-GLETF 314 (411)
T ss_dssp CCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBC
T ss_pred cccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeC
Confidence 00000 0112222222333332 2 24457778889999999999998 88775
Q ss_pred cCCc--cceEEEEEeccchHHHHHHHHHHHHh-cCceeccC----CCcEEEEEe-CCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 284 VDAV--ETNIVYFEITEDSKLYAACLLKKLEE-HGVLVMPE----SSTRVRIVV-HHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 284 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~~~~~----~~~~lRi~~-~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
.++. .+.++++.++. +.+..++.+.|.+ +||.+.++ ...++|+++ +...+++++++++++|+++++++..
T Consensus 315 ~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~ 392 (411)
T 3nnk_A 315 GDLKHKMNNVLGVVIPQ--GINGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLKF 392 (411)
T ss_dssp SCGGGBCSSEEEEECCT--TCCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcccccccEEEEECCC--CCCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 3321 35678888763 2467889999955 59999764 456899998 6566899999999999999987653
No 67
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=100.00 E-value=2.5e-32 Score=248.86 Aligned_cols=336 Identities=19% Similarity=0.248 Sum_probs=235.0
Q ss_pred ccccccCCCCCChH--HHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhh---cC
Q 018243 4 RTVDLRSDTVTKPT--EAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCET---RG 78 (359)
Q Consensus 4 ~~id~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~---~g 78 (359)
.++||.++... +. +.+.+++.. +...|+..+...++++.++++++.+..++++||++|+..++..++.. +|
T Consensus 44 ~ylD~~~~~~~-~~v~~a~~~~~~~---~~~~y~~~~~~~~l~~~la~~~~~~~v~~t~ggt~A~~~al~~~~~~~~~~G 119 (467)
T 1ax4_A 44 VYIDLLTDSGT-NAMSDHQWAAMIT---GDEAYAGSRNYYDLKDKAKELFNYDYIIPAHQGRGAENILFPVLLKYKQKEG 119 (467)
T ss_dssp CSEECSCSSSC-CCEEHHHHHHHHT---CCCCSSSCHHHHHHHHHHHHHHCCCEEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred eeeecccCcCC-HHHHHHHHHHHhh---cccccccCccHHHHHHHHHHHcCCCcEEEcCCcHHHHHHHHHHHHHhhccCC
Confidence 46788776655 22 445555443 33457777889999999999999988899999999999999998732 89
Q ss_pred Ce---EEecCCCcceeeccccccccCCccceeeecC----------CCCCCCHHHHHHHhcCCCCCccCCceeEEEEecc
Q 018243 79 SE---VILGDNSHIHIYENGGISTIGGVHPRTVKNN----------QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENT 145 (359)
Q Consensus 79 ~~---vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----------~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~ 145 (359)
|+ |+++ ..|+..+. ......|.+++.++.. .++.+|+++|++.+++.. .+++++|+++++
T Consensus 120 d~~~~viv~-~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~----~~~~~~vi~~~~ 192 (467)
T 1ax4_A 120 KAKNPVFIS-NFHFDTTA--AHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG----ADNIVAIVSTVT 192 (467)
T ss_dssp CCSSCEEEE-SSCCHHHH--HHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC----GGGEEEEEEESS
T ss_pred CccceEEEe-ccccchhh--HHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcC----CCCeeEEEEecc
Confidence 98 8888 55544443 2355667666655321 245789999999998310 026899999666
Q ss_pred ccCCC-ceecChhhHHHHHHHHHHcCcEEEEeccccc-chh-------hhcCchhHhhh----cCccEEEEeccccCCCc
Q 018243 146 HANCG-GRCLSVEYTDSVGEIAKKHGLKLHIDGARIF-NAA-------VALGVPVRRLV----QAADSASVCLSKGLGAP 212 (359)
Q Consensus 146 ~~~pt-G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~-~~~-------~~~~~~~~~~~----~~~d~~~~s~~K~~g~~ 212 (359)
+ ||| |.+++.+++++|+++|++||+++|+|++|.+ +.. .+.+.+..++. ..+|++++|+||++|.|
T Consensus 193 ~-np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~ 271 (467)
T 1ax4_A 193 C-NSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLN 271 (467)
T ss_dssp B-TTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCS
T ss_pred c-cCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCCC
Confidence 5 588 8999999999999999999999999999766 332 23344444442 35788889999999988
Q ss_pred eeeEEecC-H-HHHHHHHHHHHhhCC--Ccch-hHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcCCCceEecCC
Q 018243 213 VGSVIVGS-K-EFIKKARRLRKTLGG--GMRQ-VGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQLKGLRVDVDA 286 (359)
Q Consensus 213 ~gg~~~~~-~-~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~~g~~~~~~~ 286 (359)
.||+++.+ + ++.+.+......++. .... +.....+...+++...+ +.+++..++++++.+.|++. ++.+. .+
T Consensus 272 ~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~ 349 (467)
T 1ax4_A 272 IGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLREA-GIPIQ-YP 349 (467)
T ss_dssp SCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TCCBC-SS
T ss_pred cceEEEeCCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhC-CCCcc-cC
Confidence 78888876 7 888877655443221 1111 11111111223433221 23444557778899999884 88764 34
Q ss_pred ccceEEEEE-------eccchHHHHHHHHHHH-HhcCceecc-C----------C------CcEEEEEeC-CCCCHHHHH
Q 018243 287 VETNIVYFE-------ITEDSKLYAACLLKKL-EEHGVLVMP-E----------S------STRVRIVVH-HQISANDVH 340 (359)
Q Consensus 287 ~~~~~~~~~-------~~~~~~~~~~~~~~~l-~~~gi~~~~-~----------~------~~~lRi~~~-~~~~~~~i~ 340 (359)
..+.++|+. ++. .+.+..++.++| .++||.+.+ + + .+++|++++ ..+++++++
T Consensus 350 ~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~ 428 (467)
T 1ax4_A 350 TGGHAVFVDCKKLVPQIPG-DQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMD 428 (467)
T ss_dssp CCSSEEEEESTTTCTTSCG-GGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHH
T ss_pred CCceEEEEehhhhcccccc-CCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHH
Confidence 578888888 432 234678899999 999999876 2 1 268999987 348999999
Q ss_pred HHHHHHHHHHHHHH
Q 018243 341 YTLSCFQKIYAGVC 354 (359)
Q Consensus 341 ~~~~~l~~~~~~~~ 354 (359)
+++++|++++++..
T Consensus 429 ~~~~~l~~~~~~~~ 442 (467)
T 1ax4_A 429 YIADALIGLKEKFA 442 (467)
T ss_dssp HHHHHHHTTHHHHT
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999887753
No 68
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=1.3e-32 Score=244.92 Aligned_cols=330 Identities=12% Similarity=0.077 Sum_probs=235.7
Q ss_pred ccccccCCCCC-ChHHHHHHHHHcCCCC-CCccCCChHHHH-HHHHHHHHh----C--C--CCeEEcCCchHHHHHHHHH
Q 018243 4 RTVDLRSDTVT-KPTEAMRAAMASAEVD-DDVLMHDPTAFR-LETEMAKVM----G--K--EAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 4 ~~id~~~~~~~-~~~~~~~~a~~~~~~~-~~~~~~~~~~~~-l~~~la~~~----~--~--~~~~~~~~gt~a~~~~l~~ 72 (359)
++|||.++.+. .++|.+.+++.+.... ...|+.. ..+ +++.+++++ | . +..++++||++++..++.+
T Consensus 29 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~ 106 (390)
T 1d2f_A 29 DLLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQ 106 (390)
T ss_dssp -CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHH
T ss_pred CeeEeeecCCCCCCCHHHHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHH
Confidence 57899887664 4568899988875432 2334433 566 888888876 4 2 2346677777888888888
Q ss_pred hhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCC---CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC
Q 018243 73 HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQD---GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC 149 (359)
Q Consensus 73 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~---~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p 149 (359)
++ ++|++|+++.|+|.+... .+...|.+++.++.+.+ +.+|+++|++.+++ .++++|++++ ++||
T Consensus 107 l~-~~gd~vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-------~~~~~v~l~~-p~np 174 (390)
T 1d2f_A 107 WS-ETGEGVVIHTPAYDAFYK---AIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK-------PECKIMLLCS-PQNP 174 (390)
T ss_dssp SS-CTTCEEEEEESCCHHHHH---HHHHTTCEEEEEECEECSSSEECCHHHHHHHHTS-------TTEEEEEEES-SCTT
T ss_pred hc-CCCCEEEEcCCCcHHHHH---HHHHCCCEEEEeecccCCCccccCHHHHHHHhcc-------CCCeEEEEeC-CCCC
Confidence 87 589999999999887654 26677888888876433 35899999999983 3789998865 5779
Q ss_pred CceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhcCc-cEEEEeccccCCCce-e-eEEec-CHHHH
Q 018243 150 GGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQAA-DSASVCLSKGLGAPV-G-SVIVG-SKEFI 224 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~~~-d~~~~s~~K~~g~~~-g-g~~~~-~~~~~ 224 (359)
||.++|.+++++|+++|++||+++|+||+|..+..... ..+...+.... |. +.|+||++|.++ . |+++. ++++.
T Consensus 175 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~ 253 (390)
T 1d2f_A 175 TGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSR 253 (390)
T ss_dssp TCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHH
T ss_pred CCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHH
Confidence 99999999999999999999999999999865433211 11222332222 66 779999998543 2 77776 57888
Q ss_pred HHHHHHHH-hhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhc-CCCceEecCCccceEEEEEeccc
Q 018243 225 KKARRLRK-TLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQ-LKGLRVDVDAVETNIVYFEITED 299 (359)
Q Consensus 225 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~ 299 (359)
+.++.... ....+ ..+...++++..+++ .+.++.++++.++++++.+.|++ +|++.+. ++..+.++|+.++..
T Consensus 254 ~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~ 331 (390)
T 1d2f_A 254 DAYLSALKGRDGLS-SPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQ-IPQSTYLAWLDLRPL 331 (390)
T ss_dssp HHHHHHHHTTSCCC-SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCC-CCSBCSEEEEECGGG
T ss_pred HHHHHHHhhhcccC-CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEe-cCCccEEEEEEcccc
Confidence 88776554 22221 123344444444443 34555667788889999999998 7888764 344556678888641
Q ss_pred hHHHHHHHHHHHH-hcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 300 SKLYAACLLKKLE-EHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 300 ~~~~~~~~~~~l~-~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+.+..++.+.|. ++||.+.++. ..++|++++ .+++++++++++|+++++++
T Consensus 332 -~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 332 -NIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAG--CPRSKLEKGVAGLINAIRAV 389 (390)
T ss_dssp -CCCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHhh
Confidence 135678999997 7899997753 468999996 46899999999999998765
No 69
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=7.8e-33 Score=245.71 Aligned_cols=326 Identities=13% Similarity=0.139 Sum_probs=230.0
Q ss_pred ccccCCCCCChHHHHHHHHHcCCCC----CC-ccC----CChHHHHHHHHHHHHhCCCC--eEEcCCchHHHHHHHHHhh
Q 018243 6 VDLRSDTVTKPTEAMRAAMASAEVD----DD-VLM----HDPTAFRLETEMAKVMGKEA--GLFVPSGTMGNLISVLVHC 74 (359)
Q Consensus 6 id~~~~~~~~~~~~~~~a~~~~~~~----~~-~~~----~~~~~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l~~~~ 74 (359)
|.|+......++|.+.+++.+.... .. .|. ..+...++++.+++++|.+. .++++||++|+..++.++.
T Consensus 2 iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~ 81 (382)
T 4hvk_A 2 AYFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYA 81 (382)
T ss_dssp CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHH
T ss_pred EeecCCCcCCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhh
Confidence 3444444555567777777653321 11 111 13455789999999999874 4677888889999988887
Q ss_pred h---hcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018243 75 E---TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 75 ~---~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
. ++||+|+++.++|.+...........|++++.++.++++.+|+++|++.++ +++++|++++ ++||||
T Consensus 82 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~--------~~~~~v~~~~-~~nptG 152 (382)
T 4hvk_A 82 MRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLR--------DDTILVSVQH-ANNEIG 152 (382)
T ss_dssp HHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCC--------TTEEEEECCS-BCTTTC
T ss_pred hhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhc--------cCceEEEEEC-CCCCce
Confidence 3 599999999999988765211233468899999888889999999999998 6889998855 556999
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHHH
Q 018243 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLR 231 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~ 231 (359)
.+.+ +++|.++|++||+ +|+|++|+++... ...... +.|+++.|+||++|.++.|+++.+++. .++...
T Consensus 153 ~~~~---~~~i~~l~~~~~~-li~D~a~~~~~~~---~~~~~~--~~d~~~~s~~K~~g~~g~g~~~~~~~~--~~~~~~ 221 (382)
T 4hvk_A 153 TIQP---VEEISEVLAGKAA-LHIDATASVGQIE---VDVEKI--GADMLTISSNDIYGPKGVGALWIRKEA--KLQPVI 221 (382)
T ss_dssp BBCC---HHHHHHHHSSSSE-EEEECTTTBTTBC---CCHHHH--TCSEEEEESGGGTSCTTCEEEEEETTC--CCCCSS
T ss_pred eeCC---HHHHHHHHHHcCE-EEEEhHHhcCCCC---CCchhc--CCCEEEEeHHHhcCCCceEEEEEcCcc--CcCccc
Confidence 9988 7899999999999 9999998765432 222222 678999999998774323666654432 111110
Q ss_pred H-------hhCCCcchhHHHHHHHHHH---HHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCc-c-ceEEEEEeccc
Q 018243 232 K-------TLGGGMRQVGVLCAAALVA---LQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV-E-TNIVYFEITED 299 (359)
Q Consensus 232 ~-------~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~-~-~~~~~~~~~~~ 299 (359)
. ....+. +....++...+ +....++..++..++++++.+.|+++|++++..++. . .+++++.++.
T Consensus 222 ~~~~~~~~~~~~~~--~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~- 298 (382)
T 4hvk_A 222 LGGGQENGLRSGSE--NVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSY- 298 (382)
T ss_dssp CSSCTGGGTSCSCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETT-
T ss_pred ccCCCcCccccCCc--CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECC-
Confidence 0 001111 12222222222 234455577788899999999999988988754321 1 3467777764
Q ss_pred hHHHHHHHHHHHHhcCceeccCC-----------------------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 018243 300 SKLYAACLLKKLEEHGVLVMPES-----------------------STRVRIVVHHQISANDVHYTLSCFQKIYAGVCEE 356 (359)
Q Consensus 300 ~~~~~~~~~~~l~~~gi~~~~~~-----------------------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 356 (359)
.+..++.+.|.++||.+.++. ..++|++++..++++++++++++|+++++++.+.
T Consensus 299 --~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~~ 376 (382)
T 4hvk_A 299 --IEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRSM 376 (382)
T ss_dssp --CCHHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --CCHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 367889999999999997653 5789999988899999999999999999988754
No 70
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=100.00 E-value=6.1e-33 Score=247.40 Aligned_cols=322 Identities=13% Similarity=0.091 Sum_probs=235.4
Q ss_pred CCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC---eEEcCCchHHHHHHHHHhhhhcCCeEEecCCCc
Q 018243 12 TVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA---GLFVPSGTMGNLISVLVHCETRGSEVILGDNSH 88 (359)
Q Consensus 12 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~---~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~ 88 (359)
.+..+++++.+++.+....+..+...+...++++.++++++.+. .++++||++|+..++..+. ++||+|+++.++|
T Consensus 30 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~-~~gd~vl~~~~~~ 108 (393)
T 3kgw_A 30 GPSNLAPRVLAAGSLRMIGHMQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLL-EPGDSFLTGTNGI 108 (393)
T ss_dssp SCCCCCHHHHHHTTCCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHC-CTTCEEEEEESSH
T ss_pred CCCCCCHHHHHHhcccccCcccHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcC-CCCCEEEEEeCCc
Confidence 44455699999998854343222234566889999999999863 3677899999999999987 5999999999887
Q ss_pred cee-eccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHH
Q 018243 89 IHI-YENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAK 167 (359)
Q Consensus 89 ~~~-~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~ 167 (359)
++. +. ..+...|.+++.++.+.++.+|+++|++.+++ .++++|+++++ +||||.+++ +++|.++|+
T Consensus 109 ~~~~~~--~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~-------~~~~~v~~~~~-~nptG~~~~---l~~i~~l~~ 175 (393)
T 3kgw_A 109 WGMRAA--EIADRIGARVHQMIKKPGEHYTLQEVEEGLAQ-------HKPVLLFLVHG-ESSTGVVQP---LDGFGELCH 175 (393)
T ss_dssp HHHHHH--HHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH-------HCCSEEEEESE-ETTTTEECC---CTTHHHHHH
T ss_pred hhHHHH--HHHHHcCCceEEEeCCCCCCCCHHHHHHHHhh-------CCCcEEEEecc-CCcchhhcc---HHHHHHHHH
Confidence 642 22 33667888999998888888999999999982 28899999665 669999988 789999999
Q ss_pred HcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHH--------------
Q 018243 168 KHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRK-------------- 232 (359)
Q Consensus 168 ~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~-------------- 232 (359)
+||+++|+|++|+++... ..... .+.|+++.|+||+++++.| |+++.++++++.+.....
T Consensus 176 ~~~~~li~De~~~~g~~~---~~~~~--~~~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (393)
T 3kgw_A 176 RYQCLLLVDSVASLGGVP---IYMDQ--QGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAK 250 (393)
T ss_dssp HTTCEEEEECTTTTTTSC---CCTTT--TTCCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHH
T ss_pred HcCCEEEEECCccccCcc---cchhh--cCCCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceeecHHHHHH
Confidence 999999999998755332 11111 2678999999998866666 889999999888653221
Q ss_pred hhCC-------CcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCC---ccceEEEEEecc
Q 018243 233 TLGG-------GMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDA---VETNIVYFEITE 298 (359)
Q Consensus 233 ~~~~-------~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~---~~~~~~~~~~~~ 298 (359)
.++. ....+....++...+++ ...++..++..++++++.+.|+++ ++++..+. ..+.++++.++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~ 329 (393)
T 3kgw_A 251 LWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLKFFVKDPEIRLPTITTVTVPA 329 (393)
T ss_dssp HTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGGBCSSEEEEECCT
T ss_pred hhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcCCeEEEEeCCC
Confidence 1110 01112222233333332 234557778889999999999998 88764322 124556677753
Q ss_pred chHHHHHHHHHHHHhc-CceeccC----CCcEEEEEe-CCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 299 DSKLYAACLLKKLEEH-GVLVMPE----SSTRVRIVV-HHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 299 ~~~~~~~~~~~~l~~~-gi~~~~~----~~~~lRi~~-~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
+.+..++.++|.++ ||.+.++ ..+++|+++ +...+++++++++++|+++++++.+
T Consensus 330 --~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~ 390 (393)
T 3kgw_A 330 --GYNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCPK 390 (393)
T ss_dssp --TBCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCB
T ss_pred --CCCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhh
Confidence 24678899999666 9999765 457899998 5446999999999999999988754
No 71
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=4e-33 Score=247.68 Aligned_cols=325 Identities=14% Similarity=0.150 Sum_probs=229.4
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCC---C-C-ccCC----ChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHHh
Q 018243 5 TVDLRSDTVTKPTEAMRAAMASAEVD---D-D-VLMH----DPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~---~-~-~~~~----~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~~ 73 (359)
++|+.+. ..+++.+++++.+.... . . .|.. .+...++++.+++++|.+ ..++++||++|+..++.++
T Consensus 3 yld~~~~--~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l 80 (382)
T 4eb5_A 3 YFDYTSA--KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGY 80 (382)
T ss_dssp BCBTTTC--CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHH
T ss_pred eeccCCC--CCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHH
Confidence 4555554 45567777777664321 1 1 1221 246789999999999987 3477788899999999888
Q ss_pred h---hhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018243 74 C---ETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 74 ~---~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
. .++|++|++++++|.+.......+...|++++.++.+.++.+|+++|++.++ +++++|+++ .++|||
T Consensus 81 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~--------~~~~~v~~~-~~~npt 151 (382)
T 4eb5_A 81 AMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLR--------DDTILVSVQ-HANNEI 151 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCC--------TTEEEEECC-SBCTTT
T ss_pred HhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhc--------CCCeEEEEe-ccCCCc
Confidence 7 2489999999999987655111123468899999888888899999999998 678888884 556699
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHH-HHHH-
Q 018243 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEF-IKKA- 227 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~-~~~~- 227 (359)
|.+++ +++|.++|++||++ |+|++|+++... .....+ +.|+++.|+||++|. .| |+++.+++. +...
T Consensus 152 G~~~~---l~~i~~l~~~~~~~-i~D~a~~~g~~~---~~~~~~--~~di~~~s~sK~~g~-~g~G~~~~~~~~~l~~~~ 221 (382)
T 4eb5_A 152 GTIQP---VEEISEVLAGKAAL-HIDATASVGQIE---VDVEKI--GADMLTISSNDIYGP-KGVGALWIRKEAKLQPVI 221 (382)
T ss_dssp CBBCC---HHHHHHHHTTSSEE-EEECTTTBTTBC---CCHHHH--TCSEEEEETGGGTCC-SSCEEEEEETTCCCCCSS
T ss_pred cccCC---HHHHHHHHHHCCCE-EEEcchhcCCcc---cCcccc--CCCEEEeehHHhcCC-CceEEEEEccccccCcee
Confidence 99988 78999999999999 999998764321 222233 678999999998774 44 666665542 1110
Q ss_pred HH---HHHhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCc--cceEEEEEeccc
Q 018243 228 RR---LRKTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV--ETNIVYFEITED 299 (359)
Q Consensus 228 ~~---~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~--~~~~~~~~~~~~ 299 (359)
.. ......++. +.....+...++ +...+..+++..++++++.+.|+++|++++..++. .++++++.++.
T Consensus 222 ~~~~~~~~~~~~~~--~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~- 298 (382)
T 4eb5_A 222 LGGGQENGLRSGSE--NVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSY- 298 (382)
T ss_dssp CSSCTGGGTSCSCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETT-
T ss_pred cCCCccccccCCCc--cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCC-
Confidence 00 001111111 222222222222 33445577788889999999999988888753321 25577787764
Q ss_pred hHHHHHHHHHHHHhcCceeccCC-----------------------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 300 SKLYAACLLKKLEEHGVLVMPES-----------------------STRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 300 ~~~~~~~~~~~l~~~gi~~~~~~-----------------------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
.+..++.+.|.++||.+.++. ..++|++++..++++++++++++|+++++++++
T Consensus 299 --~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 299 --IEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp --SCHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --cCHHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 367789999988999997653 468999998778999999999999999988765
No 72
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=100.00 E-value=3.2e-33 Score=249.50 Aligned_cols=322 Identities=21% Similarity=0.235 Sum_probs=241.1
Q ss_pred cccccccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHh-hhhcCCeE
Q 018243 3 TRTVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVH-CETRGSEV 81 (359)
Q Consensus 3 ~~~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~-~~~~g~~v 81 (359)
..+|||..+.+..+ +.+.+++.+.... ..|..++...++++.++++++.+..++++||++|+..++..+ + ++|++|
T Consensus 30 ~~~id~~~~~~~~~-~~v~~a~~~~~~~-~~y~~~~~~~~l~~~la~~~~~~~~v~~~~Gt~a~~~~l~~~~~-~~gd~v 106 (399)
T 2oga_A 30 VPFLDLKAAYEELR-AETDAAIARVLDS-GRYLLGPELEGFEAEFAAYCETDHAVGVNSGMDALQLALRGLGI-GPGDEV 106 (399)
T ss_dssp BCSCCHHHHHHHTH-HHHHHHHHHHHHH-TCCSSSHHHHHHHHHHHHHTTSSEEEEESCHHHHHHHHHHHTTC-CTTCEE
T ss_pred CcccccCcCCCCCC-HHHHHHHHHHHhc-CCCCCchhHHHHHHHHHHHHCCCeEEEecCHHHHHHHHHHHhCC-CCcCEE
Confidence 45688887766555 7788888764422 246567889999999999999988899999999999999988 5 589999
Q ss_pred EecCCCcceeeccccccccCCccceeeecCC-CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHH
Q 018243 82 ILGDNSHIHIYENGGISTIGGVHPRTVKNNQ-DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTD 160 (359)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~ 160 (359)
+++.++|.+... .+...|.+++.++.++ ++.+|+++|++.++ +++++|++ +||||...+ ++
T Consensus 107 l~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~--------~~~~~v~~----~n~tG~~~~---l~ 168 (399)
T 2oga_A 107 IVPSHTYIASWL---AVSATGATPVPVEPHEDHPTLDPLLVEKAIT--------PRTRALLP----VHLYGHPAD---MD 168 (399)
T ss_dssp EEESSSCTHHHH---HHHHTTCEEEEECBCSSSSSBCHHHHHHHCC--------TTEEEECC----BCGGGCCCC---HH
T ss_pred EECCCccHHHHH---HHHHCCCEEEEEecCCCCCCcCHHHHHHhcC--------CCCeEEEE----eCCcCCccC---HH
Confidence 999999888654 3667788999887765 57899999999998 67887774 358999876 89
Q ss_pred HHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEec--cccCCCc-eeeEEec-CHHHHHHHHHHHHhh--
Q 018243 161 SVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCL--SKGLGAP-VGSVIVG-SKEFIKKARRLRKTL-- 234 (359)
Q Consensus 161 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~--~K~~g~~-~gg~~~~-~~~~~~~~~~~~~~~-- 234 (359)
+|.++|+++|+++|+|++|+.+... .+.. +....|++++|+ +|++|++ .||+++. ++++.+.++......
T Consensus 169 ~i~~l~~~~~~~li~Dea~~~g~~~-~~~~---~~~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~~g~~ 244 (399)
T 2oga_A 169 ALRELADRHGLHIVEDAAQAHGARY-RGRR---IGAGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRNYGSR 244 (399)
T ss_dssp HHHHHHHHHTCEECEECTTCTTCEE-TTEE---TTCTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHBTTCS
T ss_pred HHHHHHHHcCCEEEEECcccccCcc-CCee---cccccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHhcCcc
Confidence 9999999999999999998765432 2222 222358888888 6999863 4577776 488888877654431
Q ss_pred --------CCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEE--EEeccchHHHH
Q 018243 235 --------GGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVY--FEITEDSKLYA 304 (359)
Q Consensus 235 --------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ 304 (359)
+.+...++..++++..+++...+ ..++..++++++.+.|+++|++++...+..++.+| +.+.. .+.
T Consensus 245 ~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~ 320 (399)
T 2oga_A 245 QKYSHETKGTNSRLDEMQAAVLRIRLAHLDS-WNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRT---ERR 320 (399)
T ss_dssp STTCCCSCCCBCCCCHHHHHHHHHHHHTHHH-HHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEEC---SSH
T ss_pred ccccccccccCCCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEEC---CCH
Confidence 12223455666666666655433 66677788899999999988887643333444444 33332 156
Q ss_pred HHHHHHHHhcCceeccCCC---------------------------cEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 305 ACLLKKLEEHGVLVMPESS---------------------------TRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 305 ~~~~~~l~~~gi~~~~~~~---------------------------~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.++.+.|.++||.+.++.. ..+|++++..++++|+++++++|+++++++
T Consensus 321 ~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l 396 (399)
T 2oga_A 321 DELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAERV 396 (399)
T ss_dssp HHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 7899999999999865431 579999998999999999999999988765
No 73
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=6.7e-33 Score=246.40 Aligned_cols=327 Identities=18% Similarity=0.156 Sum_probs=232.6
Q ss_pred ccccCCCCCChHHHHHHHHHcCCCCC-------Cc--cCCChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHHhh
Q 018243 6 VDLRSDTVTKPTEAMRAAMASAEVDD-------DV--LMHDPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLVHC 74 (359)
Q Consensus 6 id~~~~~~~~~~~~~~~a~~~~~~~~-------~~--~~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~~~ 74 (359)
+.|+.+....+++.+.+++.+..... .. |...+...++++.+++++|.+ ..++++||++|+..++..+.
T Consensus 3 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~ 82 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVA 82 (384)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHH
T ss_pred EEEecCccCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhh
Confidence 44555545566688888877643221 01 222455689999999999986 45778888999999999887
Q ss_pred h---hcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018243 75 E---TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 75 ~---~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
. ++|++|++++++|.+.......+...|.+++.++.+.++.+|+++|++.++ +++++|++++ ++||||
T Consensus 83 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~--------~~~~~v~~~~-~~nptG 153 (384)
T 1eg5_A 83 ETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVD--------EDTFLVSIMA-ANNEVG 153 (384)
T ss_dssp HHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCC--------TTEEEEEEES-BCTTTC
T ss_pred hhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhC--------CCCeEEEEEC-CCCCcc
Confidence 3 489999999999887654111125678899999887788899999999998 6889999965 556999
Q ss_pred eecChhhHHHHHHHHHHcC--cEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHH--HHHH
Q 018243 152 RCLSVEYTDSVGEIAKKHG--LKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEF--IKKA 227 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~--~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~--~~~~ 227 (359)
.+++ +++|.++|++|| +++|+|++|+++... .+...+ +.|++++|+||++|.++.|++++++++ ...+
T Consensus 154 ~~~~---~~~i~~l~~~~~~~~~li~Dea~~~~~~~---~~~~~~--~~di~~~s~sK~~g~~G~G~~~~~~~~~~~~~~ 225 (384)
T 1eg5_A 154 TIQP---VEDVTRIVKKKNKETLVHVDAVQTIGKIP---FSLEKL--EVDYASFSAHKFHGPKGVGITYIRKGVPIRPLI 225 (384)
T ss_dssp BBCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSC---CCCTTT--CCSEEEEEGGGGTSCTTCEEEEECTTSCCCCSB
T ss_pred cccC---HHHHHHHHHhcCCceEEEEEhhhhcCCcc---cCchhc--CCCEEEecHHHhcCCCceEEEEEcCCCcccccc
Confidence 9998 799999999999 999999998765432 122222 578999999998875333888887764 2111
Q ss_pred HHH---HHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCc--cceEEEEEeccc
Q 018243 228 RRL---RKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV--ETNIVYFEITED 299 (359)
Q Consensus 228 ~~~---~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~--~~~~~~~~~~~~ 299 (359)
... .....++ .+....+++..+++ +..++..+++.++++++.+.|++ +++++..++. ...++++.++.
T Consensus 226 ~~~~~~~~~~~~~--~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~- 301 (384)
T 1eg5_A 226 HGGGQERGLRSGT--QNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMN-LGAHIITPLEISLPNTLSVSFPN- 301 (384)
T ss_dssp CSSCTTTTTBCSC--CCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT-TTCEECSCTTSBCTTEEEEECTT-
T ss_pred ccCcccccccCCC--CChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC-CCeEEeCCcccCCCCEEEEEeCC-
Confidence 100 0011112 23333333344443 34455777788899999999998 4888754321 23566777664
Q ss_pred hHHHHHHHHHHHHhcCceeccCC-----------------------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 300 SKLYAACLLKKLEEHGVLVMPES-----------------------STRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 300 ~~~~~~~~~~~l~~~gi~~~~~~-----------------------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
.+..++.+.|.++||.+.++. ..++||+++..++++++++++++|+++++++++
T Consensus 302 --~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 378 (384)
T 1eg5_A 302 --IRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFLDL 378 (384)
T ss_dssp --CCHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC--
T ss_pred --CCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 367789999999999997742 368999998778999999999999999988754
No 74
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=8.9e-33 Score=246.38 Aligned_cols=328 Identities=16% Similarity=0.153 Sum_probs=235.3
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC---eEEcCCchHHHHHHHHHhhhhcCCeE
Q 018243 5 TVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA---GLFVPSGTMGNLISVLVHCETRGSEV 81 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~---~~~~~~gt~a~~~~l~~~~~~~g~~v 81 (359)
.+++..+ ...+++.+.+++.+...........+...++++.+++++|.+. .++++||++|+..++..++ ++|++|
T Consensus 20 ~~~~~~g-~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~-~~gd~v 97 (393)
T 2huf_A 20 KLLMGPG-PSNAPQRVLDAMSRPILGHLHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLL-EDGDVI 97 (393)
T ss_dssp CEECSSS-CCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHC-CTTCEE
T ss_pred eEEecCC-CCCCCHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHh-CCCCEE
Confidence 3444443 4456689999998865442211123567899999999999874 3577888999999999887 599999
Q ss_pred EecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCC-ceeEEEEeccccCCCceecChhhHH
Q 018243 82 ILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYP-TTRLICLENTHANCGGRCLSVEYTD 160 (359)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~v~i~~~~~~ptG~~~~~~~l~ 160 (359)
++++++|++... ...++..|.+++.++.+.++.+|+++|++.++ + ++++|++++ ++||||.++| ++
T Consensus 98 l~~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~--------~~~~~~v~~~~-~~nptG~~~~---l~ 164 (393)
T 2huf_A 98 LIGHTGHWGDRS-ADMATRYGADVRVVKSKVGQSLSLDEIRDALL--------IHKPSVLFLTQ-GDSSTGVLQG---LE 164 (393)
T ss_dssp EEEESSHHHHHH-HHHHHHTTCEEEEEECCTTCCCCHHHHHHHHH--------HHCCSEEEEES-EETTTTEECC---CT
T ss_pred EEECCCcchHHH-HHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHh--------ccCCcEEEEEc-cCCCccccCC---HH
Confidence 999999877421 12345578899999887778899999999998 5 788999965 5569999998 78
Q ss_pred HHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHH----Hh--
Q 018243 161 SVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLR----KT-- 233 (359)
Q Consensus 161 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~----~~-- 233 (359)
+|.++|++||+++|+|++|.++... ..... .+.|+++.|+||+++++.| |+++.++++.+.++... ..
T Consensus 165 ~i~~~~~~~~~~li~D~a~~~~~~~---~~~~~--~~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~ 239 (393)
T 2huf_A 165 GVGALCHQHNCLLIVDTVASLGGAP---MFMDR--WEIDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYW 239 (393)
T ss_dssp THHHHHHHTTCEEEEECTTTBTTBC---CCTTT--TTCSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCGGG
T ss_pred HHHHHHHHcCCEEEEEcccccCCCC---cchhh--cCccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCceEEE
Confidence 9999999999999999998765332 11222 2578999999998765666 88999999888875431 10
Q ss_pred --------hC------CCcc-hhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCc--cceEE
Q 018243 234 --------LG------GGMR-QVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV--ETNIV 292 (359)
Q Consensus 234 --------~~------~~~~-~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~--~~~~~ 292 (359)
++ .... .+....+++..+++ ...++..++..++++++.+.|+++ |+++..++. .+.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~ 318 (393)
T 2huf_A 240 DMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDA-GFELYADPKDRLSTVT 318 (393)
T ss_dssp CHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCTTEE
T ss_pred chHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCccccCCcEE
Confidence 11 0001 12222222222332 224446778888999999999998 887643321 23477
Q ss_pred EEEeccchHHHHHHHHHHHHh-cCceeccC----CCcEEEEEe-CCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 293 YFEITEDSKLYAACLLKKLEE-HGVLVMPE----SSTRVRIVV-HHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~l~~-~gi~~~~~----~~~~lRi~~-~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
++.++. +.+..++.++|.+ +||.+.++ ...++|+++ ++..+++++++++++|++++++++.
T Consensus 319 ~~~~~~--~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 319 TIKVPQ--GVDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVKP 385 (393)
T ss_dssp EEECCT--TCCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCC
T ss_pred EEEcCC--CCCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 788753 2467789999964 69999775 357899999 4345789999999999999988754
No 75
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=100.00 E-value=2.6e-33 Score=247.40 Aligned_cols=328 Identities=15% Similarity=0.162 Sum_probs=236.8
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCCCCccC-C-ChHHHHHHHHHHHHhCCC----CeEEcCCchHHHHHHHHHhhhhc
Q 018243 4 RTVDLRSDTVTKPTEAMRAAMASAEVDDDVLM-H-DPTAFRLETEMAKVMGKE----AGLFVPSGTMGNLISVLVHCETR 77 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~-~~~~~~l~~~la~~~~~~----~~~~~~~gt~a~~~~l~~~~~~~ 77 (359)
+.++|..+ +..++|++.+++.+.. + ..+. . .+...++++.+++++|.+ ..++++||++|+..++.+++ ++
T Consensus 4 ~~~~~~~g-p~~~~~~v~~a~~~~~-~-~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~-~~ 79 (366)
T 1m32_A 4 NYLLLTPG-PLTTSRTVKEAMLFDS-C-TWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSAL-GP 79 (366)
T ss_dssp -CEECSSS-SCCCCHHHHHTTCCCC-C-TTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSC-CT
T ss_pred ccccccCC-CcCCCHHHHHHHhhhh-c-CCCHHHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhc-CC
Confidence 36888888 4456799999998853 2 2221 1 266789999999999953 25788899999999999987 58
Q ss_pred CCeEEecC-CCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecCh
Q 018243 78 GSEVILGD-NSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSV 156 (359)
Q Consensus 78 g~~vl~~~-~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~ 156 (359)
|++|++.+ ++|.+.+. ..+...|.+++.++.+.++.+|+++|++.+++. .++++|++.+ ++||||.++|
T Consensus 80 gd~vi~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~------~~~~~v~~~~-~~nptG~~~~- 149 (366)
T 1m32_A 80 QDKVLIVSNGAYGARMV--EMAGLMGIAHHAYDCGEVARPDVQAIDAILNAD------PTISHIAMVH-SETTTGMLNP- 149 (366)
T ss_dssp TCCEEEEESSHHHHHHH--HHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHC------TTCCEEEEES-EETTTTEECC-
T ss_pred CCeEEEEeCCCccHHHH--HHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcC------CCeEEEEEec-ccCCcceecC-
Confidence 88887665 66655443 336677889999988778889999999999831 2578888755 5569999998
Q ss_pred hhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHH-----
Q 018243 157 EYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRL----- 230 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~----- 230 (359)
+++|.++|++||+++|+|++|+++... ..... .+.|+++.|+||+++++.| |++++++++.+.++..
T Consensus 150 --l~~i~~l~~~~~~~li~Dea~~~~~~~---~~~~~--~~~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~ 222 (366)
T 1m32_A 150 --IDEVGALAHRYGKTYIVDAMSSFGGIP---MDIAA--LHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLS 222 (366)
T ss_dssp --HHHHHHHHHHHTCEEEEECTTTTTTSC---CCTTT--TTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCST
T ss_pred --HHHHHHHHHHcCCEEEEECCccccCcC---ccccc--cCccEEEecCcccccCCCceEEEEECHHHHHhhcCCCCCcc
Confidence 789999999999999999998765432 12222 2578999999999866777 9999998877654321
Q ss_pred -------H---HhhCC-CcchhHHHHHHHHHHHH---Hh--HHHHhhhHHHHHHHHHHHHhcCCCceEecCC--ccceEE
Q 018243 231 -------R---KTLGG-GMRQVGVLCAAALVALQ---EN--VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDA--VETNIV 292 (359)
Q Consensus 231 -------~---~~~~~-~~~~~~~~~~~~~~~l~---~~--~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~--~~~~~~ 292 (359)
. ...+. ....+....+++..+++ .. .++.+++..++++++.+.|+++ ++++..++ ..+.++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~ 301 (366)
T 1m32_A 223 LDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDDELHSPIIT 301 (366)
T ss_dssp TCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEE
T ss_pred ccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CCeeccCchhcCceEE
Confidence 0 00011 11223333333334443 22 3446778889999999999998 88764331 234578
Q ss_pred EEEeccchHHHHHHHHHHHHhcCceeccC---CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 293 YFEITEDSKLYAACLLKKLEEHGVLVMPE---SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~l~~~gi~~~~~---~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
++.++...+.+..++.+.|.++||.+.++ +..++|++++..++++++++++++|+++++++
T Consensus 302 ~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 365 (366)
T 1m32_A 302 AFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMYWT 365 (366)
T ss_dssp EEECCCCTTCCHHHHHHHHHHTTEECEECCCSSSCEEEEECCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred EEEcCccCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Confidence 88886300246788999998889999776 45789999987889999999999999887653
No 76
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=3.4e-33 Score=250.47 Aligned_cols=327 Identities=16% Similarity=0.105 Sum_probs=239.7
Q ss_pred cccccccCCCCCC-hHHHHHHHHHcCCCCC--CccCCChHHHHHHHHHHHHhC------C---CCeEEcCCchHHHHHHH
Q 018243 3 TRTVDLRSDTVTK-PTEAMRAAMASAEVDD--DVLMHDPTAFRLETEMAKVMG------K---EAGLFVPSGTMGNLISV 70 (359)
Q Consensus 3 ~~~id~~~~~~~~-~~~~~~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~~------~---~~~~~~~~gt~a~~~~l 70 (359)
+..|||..+.+.. ++|.+.+++.+..... ..|+...+..++++.++++++ . +..++++||++++..++
T Consensus 23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~ 102 (410)
T 3e2y_A 23 PSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSI 102 (410)
T ss_dssp TTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHH
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHH
Confidence 4578999988764 4588999888765432 245555567899999999886 2 34577777889999999
Q ss_pred HHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC-----------CCCCCCHHHHHHHhcCCCCCccCCceeE
Q 018243 71 LVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN-----------QDGTMDIDLIEAAIRDPKGEIVYPTTRL 139 (359)
Q Consensus 71 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----------~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 139 (359)
..++ ++|++|+++.|+|..... .+...|.+++.++.+ .++.+|++++++.++ +++++
T Consensus 103 ~~~~-~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~--------~~~~~ 170 (410)
T 3e2y_A 103 QGLV-DPGDEVIIMVPFYDCYEP---MVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFS--------SKTKA 170 (410)
T ss_dssp HHHC-CTTCEEEEEESCCTTHHH---HHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCC--------TTEEE
T ss_pred HHhc-CCCCEEEEeCCCchhhHH---HHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcC--------CCceE
Confidence 9887 599999999999877553 367778888888654 345689999999987 68999
Q ss_pred EEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhc--CccEEEEeccccCCCce-e-
Q 018243 140 ICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQ--AADSASVCLSKGLGAPV-G- 214 (359)
Q Consensus 140 v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~--~~d~~~~s~~K~~g~~~-g- 214 (359)
|++++ ++||||.+++.+++++|+++|++||+++|+|++|..+.+... ..+...+.. +..+++.|+||.+|.++ +
T Consensus 171 v~~~~-p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~ 249 (410)
T 3e2y_A 171 IILNT-PHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKL 249 (410)
T ss_dssp EEEES-SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCC
T ss_pred EEEeC-CCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceE
Confidence 99965 566999999999999999999999999999999865433211 112333321 22355669999998543 2
Q ss_pred eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHH----------HhHHHHhhhHHHHHHHHHHHHhcCCCceEec
Q 018243 215 SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQ----------ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDV 284 (359)
Q Consensus 215 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~ 284 (359)
|++++++++++.++........+. +...+.++..+++ .+.++.++++.++++++.+.|+++ |+.+..
T Consensus 250 G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 326 (410)
T 3e2y_A 250 GWSIGPAHLIKHLQTVQQNSFYTC--ATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV-GLKPIV 326 (410)
T ss_dssp EEEECCHHHHHHHHHHHHTTTCCC--CHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TCEEEB
T ss_pred EEEEECHHHHHHHHHHHHhhccCC--ChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecC
Confidence 889999999998876655444444 3344444444443 345556777888999999999998 888754
Q ss_pred CCccceEEEEEeccch-HH--------HHHHHHHHH-HhcCceeccCC-----------CcEEEEEeCCCCCHHHHHHHH
Q 018243 285 DAVETNIVYFEITEDS-KL--------YAACLLKKL-EEHGVLVMPES-----------STRVRIVVHHQISANDVHYTL 343 (359)
Q Consensus 285 ~~~~~~~~~~~~~~~~-~~--------~~~~~~~~l-~~~gi~~~~~~-----------~~~lRi~~~~~~~~~~i~~~~ 343 (359)
+..+.++|+.+.... +. +..++.++| .++||.+.+++ .+++|++++ .+++++++++
T Consensus 327 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~--~~~e~l~~~l 403 (410)
T 3e2y_A 327 -PDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFI--KKDSTLDAAE 403 (410)
T ss_dssp -CSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECC--CCHHHHHHHH
T ss_pred -CCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEc--CCHHHHHHHH
Confidence 468888998876410 01 234677766 78899997653 367999985 5999999999
Q ss_pred HHHHH
Q 018243 344 SCFQK 348 (359)
Q Consensus 344 ~~l~~ 348 (359)
++|++
T Consensus 404 ~~l~~ 408 (410)
T 3e2y_A 404 EIFRA 408 (410)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99875
No 77
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=6.1e-34 Score=251.94 Aligned_cols=329 Identities=16% Similarity=0.197 Sum_probs=235.2
Q ss_pred cccccccC-CCCCChHHHHHHHHHcCCCCC----------CccCCChHHHHHHHH-HHHHhCCCCeEEcCCchHHHHHHH
Q 018243 3 TRTVDLRS-DTVTKPTEAMRAAMASAEVDD----------DVLMHDPTAFRLETE-MAKVMGKEAGLFVPSGTMGNLISV 70 (359)
Q Consensus 3 ~~~id~~~-~~~~~~~~~~~~a~~~~~~~~----------~~~~~~~~~~~l~~~-la~~~~~~~~~~~~~gt~a~~~~l 70 (359)
+.+++|.. .....+++.+.+++.+..... ..+...+...++++. +++++|.+..++++||++|+..++
T Consensus 7 ~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~~v~~~~g~t~a~~~~~ 86 (371)
T 2e7j_A 7 KDFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCDVARVTNGAREAKFAVM 86 (371)
T ss_dssp -CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSSEEEEESSHHHHHHHHH
T ss_pred CCcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCCEEEEeCChHHHHHHHH
Confidence 34566666 334555688999998765432 123356778999999 999999983355566689999999
Q ss_pred HHhhhhcCCeEEecCCCcceeeccccccccCCccceeee--cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccC
Q 018243 71 LVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVK--NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHAN 148 (359)
Q Consensus 71 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ 148 (359)
..++ ++|++|++++++|.+... . +...|++++.++ .++++.+|+++|++.+++.... +++++|++++ ++|
T Consensus 87 ~~~~-~~gd~vl~~~~~~~~~~~-~--~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~---~~~~~v~~~~-~~n 158 (371)
T 2e7j_A 87 HSLA-KKDAWVVMDENCHYSSYV-A--AERAGLNIALVPKTDYPDYAITPENFAQTIEETKKR---GEVVLALITY-PDG 158 (371)
T ss_dssp HHHC-CTTCEEEEETTCCHHHHH-H--HHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTT---SCEEEEEEES-SCT
T ss_pred HHHh-CCCCEEEEccCcchHHHH-H--HHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhccc---CCeEEEEEEC-CCC
Confidence 9987 599999999999988775 2 677898999998 7777889999999999732110 3678888855 456
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHH-
Q 018243 149 CGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKK- 226 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~- 226 (359)
|||.+++ +++|.++|++||+++|+|++|+.+... .+...+ +.|+++.|+||+++++.+ |+++.++++++.
T Consensus 159 ptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~---~~~~~~--~~di~~~s~sK~~~~~~~~G~~~~~~~~~~~~ 230 (371)
T 2e7j_A 159 NYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP---VSLKEI--GADFIVGSGHKSMAASGPIGVMGMKEEWAEIV 230 (371)
T ss_dssp TTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC---CCHHHH--TCSEEEEEHHHHSSCCSSCEEEEECTTTTTTT
T ss_pred CCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC---CChhhc--CCCEEEecCCcCCCCCCCcEEEEEechhhhhh
Confidence 9999998 699999999999999999998765432 223333 678999999999877666 889988887665
Q ss_pred HHHHHHhhCC-----CcchhHHHHHHHHHHHHHhHHHHhhhH--HHHHHHHHHHHhcCCCceEecCCc-cceEEEEEecc
Q 018243 227 ARRLRKTLGG-----GMRQVGVLCAAALVALQENVLVMLDGD--HKKAKLLAEGLNQLKGLRVDVDAV-ETNIVYFEITE 298 (359)
Q Consensus 227 ~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~l~~~l~~~~g~~~~~~~~-~~~~~~~~~~~ 298 (359)
++........ ....+....+++..+++.......++. .++++++.+.|+++ ++++..+.. .++++|+.++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~- 308 (371)
T 2e7j_A 231 LRRSEKYKNKEVELLGCTARGATIITLMASFPHVRERIKRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAE- 308 (371)
T ss_dssp TCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECH-
T ss_pred ccccccCcccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEECC-
Confidence 5433221111 111222333333344433222366677 88999999999998 888754321 4678888875
Q ss_pred chHHHHHHHHHHHHhcCceeccC-------C--CcEEE-EEeCCC-CCHHHHHHHHHHHHHHHHHH
Q 018243 299 DSKLYAACLLKKLEEHGVLVMPE-------S--STRVR-IVVHHQ-ISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 299 ~~~~~~~~~~~~l~~~gi~~~~~-------~--~~~lR-i~~~~~-~~~~~i~~~~~~l~~~~~~~ 353 (359)
+..++.+.|.++||.+.+. + ..++| ++++.. ++++++++++++|+++++++
T Consensus 309 ----~~~~~~~~l~~~gi~~~~~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 309 ----VLYEISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp ----HHHHHHHHSSSGGGHHHHHHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred ----CHHHHHHHHHHCCEEEEeccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence 4668889998999998651 1 56799 999766 89999999999999988764
No 78
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=100.00 E-value=2.1e-32 Score=243.47 Aligned_cols=313 Identities=20% Similarity=0.174 Sum_probs=228.8
Q ss_pred HHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHh-hhhcCCeEEecCCCcceeeccc
Q 018243 18 EAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVH-CETRGSEVILGDNSHIHIYENG 95 (359)
Q Consensus 18 ~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~-~~~~g~~vl~~~~~~~~~~~~~ 95 (359)
+++.+++.+.... ...|...+...++++.+++++|.+..++++||++|+..++.++ . ++|++|+++.++|.+...
T Consensus 17 ~~~~~a~~~~l~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~al~~~l~~l~~-~~gd~Vi~~~~~~~~~~~-- 93 (388)
T 1b9h_A 17 DAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGV-GPGTEVIVPAFTFISSSQ-- 93 (388)
T ss_dssp HHHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTC-CTTCEEEEESSSCTHHHH--
T ss_pred HHHHHHHHHHHHcCCeeecCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCC-CCcCEEEECCCccHHHHH--
Confidence 6677777664432 2345667889999999999999988899999999999999998 5 589999999999988765
Q ss_pred cccccCCccceeeecCC-CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEE
Q 018243 96 GISTIGGVHPRTVKNNQ-DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLH 174 (359)
Q Consensus 96 ~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li 174 (359)
.+...|++++.++.+. ++.+|+++|++.++ +++++|+ ++||||.+.+ +++|.++|++||+++|
T Consensus 94 -~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~--------~~~~~v~----~~n~tG~~~~---l~~i~~la~~~~~~li 157 (388)
T 1b9h_A 94 -AAQRLGAVTVPVDVDAATYNLDPEAVAAAVT--------PRTKVIM----PVHMAGLMAD---MDALAKISADTGVPLL 157 (388)
T ss_dssp -HHHHTTCEEEEECBCTTTCCBCHHHHHHHCC--------TTEEEEC----CBCGGGCCCC---HHHHHHHHHHHTCCBC
T ss_pred -HHHHcCCEEEEEecCCCcCCCCHHHHHHhcC--------cCceEEE----EeCCccCcCC---HHHHHHHHHHcCCEEE
Confidence 3677888999998765 47899999999998 6788776 4558999866 8999999999999999
Q ss_pred EecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHH-H--HHHHHHHHHhh-------------CCCc
Q 018243 175 IDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKE-F--IKKARRLRKTL-------------GGGM 238 (359)
Q Consensus 175 ~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~-~--~~~~~~~~~~~-------------~~~~ 238 (359)
+|++|+.|... .+.....+. ..++.++|.+|+++++.||+++.+++ + .+.++...... +.+.
T Consensus 158 ~D~a~~~g~~~-~~~~~~~~~-~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 235 (388)
T 1b9h_A 158 QDAAHAHGARW-QGKRVGELD-SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNM 235 (388)
T ss_dssp EECTTCTTCEE-TTEEGGGSS-SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBC
T ss_pred EecchhcCCcc-CCeeccccc-ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccC
Confidence 99998765432 233333321 23344445568886666788887765 5 45554332210 1222
Q ss_pred chhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecC-----CccceEEEEEeccchHHHHHHHHHHHHh
Q 018243 239 RQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVD-----AVETNIVYFEITEDSKLYAACLLKKLEE 313 (359)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 313 (359)
..+...+++....++. +++..+++.++++++.+.|+++|++.+..+ +..++++++.++...+.+.+++.+.|.+
T Consensus 236 ~~~~~~~a~~~~~~~~-l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 314 (388)
T 1b9h_A 236 RLNEFSASVLRAQLAR-LDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLVE 314 (388)
T ss_dssp BCBHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcCcccHHHHHHHHHH
Confidence 2344444444444443 333677788889999999999888887532 2346788998875222467889999988
Q ss_pred cCceeccCC---------------------------------CcEEEEEeCCCC-CHHHHHHHHHHHHHHHHH
Q 018243 314 HGVLVMPES---------------------------------STRVRIVVHHQI-SANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 314 ~gi~~~~~~---------------------------------~~~lRi~~~~~~-~~~~i~~~~~~l~~~~~~ 352 (359)
+||.+.++. ...+|++++..+ +++|++++++.|++++++
T Consensus 315 ~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 315 AGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp TTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 999885431 125999999899 999999999999988764
No 79
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=1.4e-32 Score=246.99 Aligned_cols=320 Identities=13% Similarity=0.118 Sum_probs=233.9
Q ss_pred CCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCe--E-EcCCchHHHHHHHHHhhhhcCCeEEecCCCcc
Q 018243 13 VTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAG--L-FVPSGTMGNLISVLVHCETRGSEVILGDNSHI 89 (359)
Q Consensus 13 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~--~-~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~ 89 (359)
+..+++++.+++.+.......+...+...++++.+++++|.+.. + +++||++++..++.++. ++||+|+++.++|+
T Consensus 19 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~-~~gd~Vl~~~~~~~ 97 (416)
T 3isl_A 19 PVEVDPRVLRVMSTPVVGQFDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVI-EPEDDVLIPIYGRF 97 (416)
T ss_dssp SCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHC-CTTCEEEEEESSHH
T ss_pred CcCcCHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhc-CCCCEEEEecCCcc
Confidence 34445889888887433322222345678999999999998764 3 66788899999999887 59999999999988
Q ss_pred e-eeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHH
Q 018243 90 H-IYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKK 168 (359)
Q Consensus 90 ~-~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~ 168 (359)
+ .+. ..++..|.+++.++.+.++.+|+++|++.+++ +++++|+++++ +||||.+.+ +++|.++|++
T Consensus 98 ~~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------~~~~~v~~~~~-~nptG~~~~---l~~i~~l~~~ 164 (416)
T 3isl_A 98 GYLLT--EIAERYGANVHMLECEWGTVFDPEDIIREIKK-------VKPKIVAMVHG-ETSTGRIHP---LKAIGEACRT 164 (416)
T ss_dssp HHHHH--HHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH-------HCCSEEEEESE-ETTTTEECC---CHHHHHHHHH
T ss_pred cHHHH--HHHHhcCCeeEEEecCCCCCCCHHHHHHHHhh-------CCCcEEEEEcc-CCCCceecC---HHHHHHHHHH
Confidence 7 232 34677899999999888889999999999983 47889999665 559999988 8999999999
Q ss_pred cCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHH----------------
Q 018243 169 HGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLR---------------- 231 (359)
Q Consensus 169 ~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~---------------- 231 (359)
||+++|+|++|+++... ..... .++|+++.|+||+++++.| |+++.++++.+.+....
T Consensus 165 ~~~~li~D~a~~~~~~~---~~~~~--~~~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~ 239 (416)
T 3isl_A 165 EDALFIVDAVATIGGCE---VKVDE--WKIDAAIGGTQKCLSVPSGMAPITYNERVADVIAARKKVERGIATQADRAALS 239 (416)
T ss_dssp TTCEEEEECTTTTTTSC---CCTTT--TTCSEEECCSSSTTCCCSSEEEEEECHHHHHHHHTC-----------------
T ss_pred cCCEEEEECCccccCCC---cchhh--cCCCEEEecCccccCCCCCeEEEEECHHHHHHhhccccccccccccccchhcc
Confidence 99999999998765442 11222 2688999999998766666 88999999888775321
Q ss_pred -------------------HhhCCCc-chhHHHHHHHHHHH---HHh-HHHHhhhHHHHHHHHHHHHhcCCCceEecCCc
Q 018243 232 -------------------KTLGGGM-RQVGVLCAAALVAL---QEN-VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV 287 (359)
Q Consensus 232 -------------------~~~~~~~-~~~~~~~~~~~~~l---~~~-~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 287 (359)
....... ..+.....+...++ ... .++..++..++++++.+.|++. ++++..++.
T Consensus 240 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 318 (416)
T 3isl_A 240 GNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAM-GLRLFGDDS 318 (416)
T ss_dssp -CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGG
T ss_pred CCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCcc
Confidence 0000001 11222222223333 222 4557778889999999999997 888753321
Q ss_pred --cceEEEEEeccchHHHHHHHHHHHHhc-CceeccC----CCcEEEEEeCCCCCHHH-HHHHHHHHHHHHHHHH
Q 018243 288 --ETNIVYFEITEDSKLYAACLLKKLEEH-GVLVMPE----SSTRVRIVVHHQISAND-VHYTLSCFQKIYAGVC 354 (359)
Q Consensus 288 --~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~----~~~~lRi~~~~~~~~~~-i~~~~~~l~~~~~~~~ 354 (359)
.+.++++.++. +.+..++.++|.++ ||.+.++ ..+++|++++...++++ +++++++|+++++++.
T Consensus 319 ~~~~~~~~~~~~~--~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~ 391 (416)
T 3isl_A 319 CKMPVVTCVEIPG--GIDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHN 391 (416)
T ss_dssp GBCTTEEEEECCT--TCCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCcEEEEeCCC--CCCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcC
Confidence 25677888753 24678999999665 9999764 45789999966677777 9999999999998764
No 80
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=100.00 E-value=8e-32 Score=238.80 Aligned_cols=317 Identities=15% Similarity=0.100 Sum_probs=226.7
Q ss_pred CCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC---eEE-cCCchHHHHHHHHHhhhhcCCeEEecCCCc
Q 018243 13 VTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA---GLF-VPSGTMGNLISVLVHCETRGSEVILGDNSH 88 (359)
Q Consensus 13 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~---~~~-~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~ 88 (359)
+..++|++.+++.+....+......+...++++.+++++|.+. .++ ++||++++..++.+++ ++||+|+++.+.|
T Consensus 27 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~-~~gd~vi~~~~~~ 105 (376)
T 3f0h_A 27 PVMSSEEVRAIGAEQVPYFRTTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCF-TKKDKVLVIDGGS 105 (376)
T ss_dssp SCCCCHHHHHHHTSCCCCCSSHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHC-CTTCCEEEEESSH
T ss_pred CCCCcHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhcc-CCCCeEEEEeCCh
Confidence 3445689999998865333222223556788999999999873 344 5677999999999887 5999999999876
Q ss_pred ceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHH
Q 018243 89 IHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKK 168 (359)
Q Consensus 89 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~ 168 (359)
++... ...+...|.+++.++.+.++.+|++++++.++ +++++|++++ ++||||.++| +++|.++|++
T Consensus 106 ~~~~~-~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~--------~~~~~v~~~~-~~nptG~~~~---l~~i~~l~~~ 172 (376)
T 3f0h_A 106 FGHRF-VQLCEIHEIPYVALKLEHGKKLTKEKLYEYDN--------QNFTGLLVNV-DETSTAVLYD---TMMIGEFCKK 172 (376)
T ss_dssp HHHHH-HHHHHHTTCCEEEEECCTTCCCCHHHHHTTTT--------SCCCEEEEES-EETTTTEECC---HHHHHHHHHH
T ss_pred hhHHH-HHHHHHcCCceEEEeCCCCCCCCHHHHHHhhc--------cCceEEEEec-ccCCcceecC---HHHHHHHHHH
Confidence 66432 12356678899999888888899999998776 7889999855 5569999998 8999999999
Q ss_pred cCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHHh--------------
Q 018243 169 HGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRKT-------------- 233 (359)
Q Consensus 169 ~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~-------------- 233 (359)
||+++|+|++|+++... ...... ++|+++.|+||+++++.| |+++.++++.+.+......
T Consensus 173 ~~~~li~D~~~~~~~~~---~~~~~~--~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (376)
T 3f0h_A 173 NNMFFVCDCVSAFLADP---FNMNEC--GADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQE 247 (376)
T ss_dssp TTCEEEEECTTTTTTSC---CCHHHH--TCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHT
T ss_pred cCCEEEEEcCccccCcc---cccccc--CccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceeecHHHHHhhcc
Confidence 99999999998665432 122222 578999999999986556 8888999988876531100
Q ss_pred hCC-CcchhHHHHHHHHHH---HHH--hHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHH
Q 018243 234 LGG-GMRQVGVLCAAALVA---LQE--NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACL 307 (359)
Q Consensus 234 ~~~-~~~~~~~~~~~~~~~---l~~--~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (359)
.+. ....+....++...+ +.. ..+...++..++++++.+.|+++ ++++..+.....++.+.... .+..++
T Consensus 248 ~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~l 323 (376)
T 3f0h_A 248 RGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDL-PFELVSESPANGVTSVHPTT---ANAYDI 323 (376)
T ss_dssp TTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS-SEEECCSSBBTTEEEEEESS---SCHHHH
T ss_pred cCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCccCccccCceEEEEeCCC---CCHHHH
Confidence 011 111122111222223 332 24557777888899999999988 77764332222233333322 467899
Q ss_pred HHHHHhc-CceeccC----CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 308 LKKLEEH-GVLVMPE----SSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 308 ~~~l~~~-gi~~~~~----~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.+.|.++ ||.+.++ ...++|++++..++++++++++++|++++++
T Consensus 324 ~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 324 FLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp HHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 9999776 9999765 3568999998889999999999999998764
No 81
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=1.8e-32 Score=246.80 Aligned_cols=329 Identities=14% Similarity=0.179 Sum_probs=237.2
Q ss_pred cccccccCCCCCChHHHHHHHHHcCCC--CCCc------c----CCChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHH
Q 018243 3 TRTVDLRSDTVTKPTEAMRAAMASAEV--DDDV------L----MHDPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLI 68 (359)
Q Consensus 3 ~~~id~~~~~~~~~~~~~~~a~~~~~~--~~~~------~----~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~ 68 (359)
.+++.|.......++|.+.+++.+... .... + ...+...++++.++++++.+ ..++++||++|+..
T Consensus 21 ~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~~~ 100 (423)
T 3lvm_A 21 KLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNL 100 (423)
T ss_dssp CSSEECBTTTCCCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHH
T ss_pred CCCEeecCCCcCCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHHHHH
Confidence 455666666666777999999998765 2111 1 11245588999999999987 56888899999999
Q ss_pred HHHHhhh---hcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEecc
Q 018243 69 SVLVHCE---TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENT 145 (359)
Q Consensus 69 ~l~~~~~---~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~ 145 (359)
++.++.. ++|++|+++.++|.+...........|++++.++.+.++.+|+++|++.++ +++++|+++++
T Consensus 101 a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~--------~~~~~v~~~~~ 172 (423)
T 3lvm_A 101 AIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMR--------DDTILVSIMHV 172 (423)
T ss_dssp HHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCC--------TTEEEEECCSB
T ss_pred HHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcC--------CCcEEEEEeCC
Confidence 9988772 379999999999988664111125568899999888889999999999998 68899998554
Q ss_pred ccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHHHH
Q 018243 146 HANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIK 225 (359)
Q Consensus 146 ~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~ 225 (359)
+||||.+++ +++|.++|++||++||+|++|+.+... ..... .+.|+++.|+||.+|++..|+++.+++..+
T Consensus 173 -~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~---~~~~~--~~~di~~~s~sK~~g~~g~G~~~~~~~~~~ 243 (423)
T 3lvm_A 173 -NNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKLP---IDLSQ--LKVDLMSFSGHKIYGPKGIGALYVRRKPRV 243 (423)
T ss_dssp -CTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTSC---CCTTT--SCCSEEEEESTTTTSCSSCEEEEECBTTBC
T ss_pred -CCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCCC---cChhh--cCCCEEEechHHhcCCCCeEEEEEeccccC
Confidence 569999998 789999999999999999998654331 11222 267899999999777433377887766555
Q ss_pred HHHHHHH-------hhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCc--cceEEE
Q 018243 226 KARRLRK-------TLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV--ETNIVY 293 (359)
Q Consensus 226 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~--~~~~~~ 293 (359)
.+..... ....+. +....++...++ +...++..++..++++++.+.|+++|++++..++. ...+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 321 (423)
T 3lvm_A 244 RIEAQMHGGGHERGMRSGTL--PVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILN 321 (423)
T ss_dssp CCCCSSCSSCTTTTTCCSCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEE
T ss_pred CCCccccCCcccccccCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEE
Confidence 4332211 111111 222222222333 33345577788899999999999998998754322 135666
Q ss_pred EEeccchHHHHHHHHHHHHhcCceeccCC-----------------------CcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 294 FEITEDSKLYAACLLKKLEEHGVLVMPES-----------------------STRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 294 ~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-----------------------~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
+.+.. .+..++.+.|.+ |.+.++. ..++|++++..++++++++++++|++++
T Consensus 322 ~~~~~---~~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~ 396 (423)
T 3lvm_A 322 VSFNY---VEGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSI 396 (423)
T ss_dssp EEETT---SCHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred EEeCC---CCHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 77654 367788888866 6665542 3789999988899999999999999999
Q ss_pred HHHHh
Q 018243 351 AGVCE 355 (359)
Q Consensus 351 ~~~~~ 355 (359)
+++++
T Consensus 397 ~~~~~ 401 (423)
T 3lvm_A 397 GRLRD 401 (423)
T ss_dssp HHHHT
T ss_pred HHhhc
Confidence 88764
No 82
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=100.00 E-value=1.4e-32 Score=241.44 Aligned_cols=314 Identities=18% Similarity=0.155 Sum_probs=228.8
Q ss_pred CCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCC---C-eEEcCCchHHHHHHHHHhhhhcCCeEEecCCC
Q 018243 12 TVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKE---A-GLFVPSGTMGNLISVLVHCETRGSEVILGDNS 87 (359)
Q Consensus 12 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~---~-~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~ 87 (359)
.+..++|.+.+++.+....+..+...+...++++.+++++|.+ . .++++||++|+..++..+. + ++|++++++
T Consensus 7 gp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~-~--d~vl~~~~~ 83 (353)
T 2yrr_A 7 GPTPIPERVQKALLRPMRGHLDPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLD-R--GPVLVLVNG 83 (353)
T ss_dssp SSCCCCHHHHGGGGSCCCCTTCHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCS-C--CCEEEEECS
T ss_pred CCCCCCHHHHHHHhcccccccCHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhc-C--CcEEEEcCC
Confidence 3445568999999886644222122345789999999999985 3 3566778888888888776 3 789999998
Q ss_pred ccee-eccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCC-ceeEEEEeccccCCCceecChhhHHHHHHH
Q 018243 88 HIHI-YENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYP-TTRLICLENTHANCGGRCLSVEYTDSVGEI 165 (359)
Q Consensus 88 ~~~~-~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~ 165 (359)
|++. +. ..+...|.+++.++.+.++.+|+++|++.++ + ++++|+++ .++||||.+++ +++|.++
T Consensus 84 ~~~~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~--------~~~~~~v~~~-~~~nptG~~~~---~~~i~~l 149 (353)
T 2yrr_A 84 AFSQRVA--EMAALHGLDPEVLDFPPGEPVDPEAVARALK--------RRRYRMVALV-HGETSTGVLNP---AEAIGAL 149 (353)
T ss_dssp HHHHHHH--HHHHHTTCCEEEEECCTTSCCCHHHHHHHHH--------HSCCSEEEEE-SEETTTTEECC---HHHHHHH
T ss_pred CchHHHH--HHHHHcCCceEEEeCCCCCCCCHHHHHHHHH--------hCCCCEEEEE-ccCCCcceecC---HHHHHHH
Confidence 8874 22 2356778899999888888899999999998 4 78888885 45569999988 7899999
Q ss_pred HHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHH----------H---H
Q 018243 166 AKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARR----------L---R 231 (359)
Q Consensus 166 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~----------~---~ 231 (359)
|++||+++|+|++|+++.. ..+...+ +.|++++|++|+++++.| |++++++++++.++. . .
T Consensus 150 ~~~~~~~li~D~a~~~~~~---~~~~~~~--~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (353)
T 2yrr_A 150 AKEAGALFFLDAVTTLGML---PFSMRAM--GVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTGKRGWYLDLARVAEHW 224 (353)
T ss_dssp HHHHTCEEEEECTTTTTTS---CCCHHHH--TCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCCCSCSTTCHHHHHHHH
T ss_pred HHHcCCeEEEEcCcccccc---ccccccc--CceEEEecCcccccCCCceEEEEECHHHHHHhccCCCccccHHHHhhhh
Confidence 9999999999999865433 2223333 578999999998876666 899999988876530 0 0
Q ss_pred --HhhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCc-cceEEEEEeccchHHHH
Q 018243 232 --KTLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV-ETNIVYFEITEDSKLYA 304 (359)
Q Consensus 232 --~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~ 304 (359)
....++. +.....++..+++ ...++.++++.++++++.+.|+++ |+++..++. .+.++++.++. +.+.
T Consensus 225 ~~~~~~~~~--~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~--~~~~ 299 (353)
T 2yrr_A 225 ERGGYHHTT--PVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPYPKASPLPTVLVVRPPE--GVDA 299 (353)
T ss_dssp TTCCCSSCC--CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSSBCTTEEEEECCT--TCCH
T ss_pred hcCCCCCCC--CHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccccCccCCCeEEEEECCC--CCCH
Confidence 1111222 2222233233332 224456778889999999999998 888754321 45556788753 2467
Q ss_pred HHHHHHHHhcCceeccCC----CcEEEEEeCCCCCHHHHH-HHHHHHHHHHHH
Q 018243 305 ACLLKKLEEHGVLVMPES----STRVRIVVHHQISANDVH-YTLSCFQKIYAG 352 (359)
Q Consensus 305 ~~~~~~l~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~-~~~~~l~~~~~~ 352 (359)
.++.+.|.++||.+.++. ..++|++++...++++++ +++++|+++++.
T Consensus 300 ~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 300 DRLVRALYAEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp HHHHHHHHHTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 889999988899997653 568999997788999999 999999988754
No 83
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=9.2e-33 Score=248.28 Aligned_cols=331 Identities=12% Similarity=0.033 Sum_probs=234.3
Q ss_pred cccccCCCCC---ChH-HHHHHHHHcCC---CC--CCccCCChHHHHHHHHHHHHhCCCC-eEEc-CCchHHH--HHHHH
Q 018243 5 TVDLRSDTVT---KPT-EAMRAAMASAE---VD--DDVLMHDPTAFRLETEMAKVMGKEA-GLFV-PSGTMGN--LISVL 71 (359)
Q Consensus 5 ~id~~~~~~~---~~~-~~~~~a~~~~~---~~--~~~~~~~~~~~~l~~~la~~~~~~~-~~~~-~~gt~a~--~~~l~ 71 (359)
.|||..+.+. .|. +.+.+++.+.. .. ...|+...+..++++.++++++.+. .+++ +|+++++ ..++.
T Consensus 34 ~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~ 113 (422)
T 3d6k_A 34 SLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIMFDLISW 113 (422)
T ss_dssp CEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHH
T ss_pred eEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHhCCChhHEEEecchHHHHHHHHHHH
Confidence 6899988775 444 47777776542 11 2357666778999999999998863 3544 5555565 33444
Q ss_pred Hhhhhc------------CCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeE
Q 018243 72 VHCETR------------GSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRL 139 (359)
Q Consensus 72 ~~~~~~------------g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 139 (359)
.+. .+ +++|+++.|+|..... .++..|.+++.++.++++ +|+++|++.+++ .++++
T Consensus 114 ~l~-~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~-------~~~~~ 181 (422)
T 3d6k_A 114 SYT-WGNNDSSRPWSAEEKVKWLCPVPGYDRHFT---ITEHFGFEMINVPMTDEG-PDMGVVRELVKD-------PQVKG 181 (422)
T ss_dssp HHH-HCCTTCSSCGGGSSCCEEEEEESCCHHHHH---HHHHHTCEEEEEEEETTE-ECHHHHHHHHTS-------TTEEE
T ss_pred Hhc-CcccccccccccCCCCEEEEeCCccHHHHH---HHHHcCCEEEecCCCCCC-CCHHHHHHHHhc-------CCCeE
Confidence 444 34 3479999999877553 367778899999876655 899999999983 37889
Q ss_pred EEEeccccCCCceecChhhHHHHHHHHH-HcCcEEEEecccccchhhhcC---chhHhh-----hcCccEEEEeccccCC
Q 018243 140 ICLENTHANCGGRCLSVEYTDSVGEIAK-KHGLKLHIDGARIFNAAVALG---VPVRRL-----VQAADSASVCLSKGLG 210 (359)
Q Consensus 140 v~i~~~~~~ptG~~~~~~~l~~i~~~~~-~~~~~li~D~a~~~~~~~~~~---~~~~~~-----~~~~d~~~~s~~K~~g 210 (359)
|++.+.++||||.+++.+++++|.++|+ +||++||+||+|..+.+...+ .+...+ ..+..+++.|+||+ +
T Consensus 182 v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~ 260 (422)
T 3d6k_A 182 MWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-T 260 (422)
T ss_dssp EEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-S
T ss_pred EEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-c
Confidence 8866778889999999999999999999 999999999998632232222 133222 11234556699998 4
Q ss_pred Cce-e-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHH------HhHHHHhhhHHHHHHHHHHHHhc----CC
Q 018243 211 APV-G-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQ------ENVLVMLDGDHKKAKLLAEGLNQ----LK 278 (359)
Q Consensus 211 ~~~-g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~~~~~~~~~~~l~~~l~~----~~ 278 (359)
+|+ . ||+++++++++.+.......+.+. +...+.++...++ .+.++.++.+.++++.+.+.|++ .+
T Consensus 261 ~~GlriG~~~~~~~l~~~l~~~~~~~~~~~--~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~ 338 (422)
T 3d6k_A 261 HAGSGVSFFASSKENIEWYASHANVRGIGP--NKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYG 338 (422)
T ss_dssp CTTSSCEEEECCHHHHHHHHHHHHHHCSCC--CHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred CcccceEEEEeCHHHHHHHHHHHHhhcCCC--CHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCC
Confidence 443 2 899999999999887766655444 3344444444443 23333455566667766666654 32
Q ss_pred CceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC----------CcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018243 279 GLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES----------STRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 279 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~----------~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
++.+. .+..++++|+.++.. +...+.+.|.++||.+.+++ ..++||+++. .+++++++++++|++
T Consensus 339 ~~~~~-~p~~g~~~~~~~~~~---~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~-~~~e~i~~~~~~l~~ 413 (422)
T 3d6k_A 339 VAKWT-SPTGGYFISVDVVPG---TASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSL-PPVAELEVAMDGFAT 413 (422)
T ss_dssp CEEEC-CCSBSSCEEEEESTT---CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSS-SCHHHHHHHHHHHHH
T ss_pred ceEEe-CCCcceEEEEECCCC---CHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCC-CCHHHHHHHHHHHHH
Confidence 35653 345788999999752 46678888899999998732 4689999975 899999999999999
Q ss_pred HHHHHHh
Q 018243 349 IYAGVCE 355 (359)
Q Consensus 349 ~~~~~~~ 355 (359)
+++++..
T Consensus 414 ~l~~~~~ 420 (422)
T 3d6k_A 414 CVLMAAL 420 (422)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9988754
No 84
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=6.2e-33 Score=249.42 Aligned_cols=332 Identities=15% Similarity=0.082 Sum_probs=235.9
Q ss_pred cccccccCCCCCCh-HHHHHHHHHcCCCC-CCccCC--ChHHHHHHHHHHHHhCCC----CeEEcCCchHHHHHHHHHhh
Q 018243 3 TRTVDLRSDTVTKP-TEAMRAAMASAEVD-DDVLMH--DPTAFRLETEMAKVMGKE----AGLFVPSGTMGNLISVLVHC 74 (359)
Q Consensus 3 ~~~id~~~~~~~~~-~~~~~~a~~~~~~~-~~~~~~--~~~~~~l~~~la~~~~~~----~~~~~~~gt~a~~~~l~~~~ 74 (359)
..+|||..+....+ +|.+.+++.+.... ...|+. .+....+.+.+++.++.+ ..++++||++|+..++..+.
T Consensus 61 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~ 140 (421)
T 3l8a_A 61 PELLQMWVADMDFLPVPEIKEAIINYGREHIFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFS 140 (421)
T ss_dssp TTCEECCSSCCCSCCCHHHHHHHHHHHHHCCSSCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS
T ss_pred CCeeecccCCCCCCCCHHHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhc
Confidence 36789988766544 48888888775432 223433 223345555555556632 24677777789999999987
Q ss_pred hhcCCeEEecCCCcceeeccccccccCCccceeeecC---CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018243 75 ETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN---QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 75 ~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
++|++|+++.|+|.+... .+...|.+++.++.+ .++.+|+++|++.+++ +++++|+++++ +||||
T Consensus 141 -~~gd~Vi~~~~~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~-------~~~~~vil~~p-~nptG 208 (421)
T 3l8a_A 141 -EKGDAVLINSPVYYPFAR---TIRLNDHRLVENSLQIINGRFEIDFEQLEKDIID-------NNVKIYLLCSP-HNPGG 208 (421)
T ss_dssp -CTEEEEEEEESCCHHHHH---HHHHTTEEEEEEECEEETTEEECCHHHHHHHHHH-------TTEEEEEEESS-BTTTT
T ss_pred -CCCCEEEECCCCcHHHHH---HHHHCCCEEEeccccccCCCeeeCHHHHHHHhhc-------cCCeEEEECCC-CCCCC
Confidence 589999999999888654 366678888888754 3346899999999984 57899999665 56999
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhh-cCchhHhhhc---CccEEEEeccccCCCce-e-eEEecC-HHHH
Q 018243 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA-LGVPVRRLVQ---AADSASVCLSKGLGAPV-G-SVIVGS-KEFI 224 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~~---~~d~~~~s~~K~~g~~~-g-g~~~~~-~~~~ 224 (359)
.+++.+++++|+++|++||+++|+||+|....... ...+...+.. +..+++.|+||++|.++ . |+++.+ +++.
T Consensus 209 ~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~ 288 (421)
T 3l8a_A 209 RVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLR 288 (421)
T ss_dssp BCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHH
T ss_pred CcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHH
Confidence 99999999999999999999999999986543321 1122222211 23366679999997433 2 777776 8998
Q ss_pred HHHHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchH
Q 018243 225 KKARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSK 301 (359)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 301 (359)
+.+.......+.. ..++..++++..+++ .+.++.+++..++++++.+.|+++|++.+.. +..+.+.|+.++. .+
T Consensus 289 ~~~~~~~~~~~~~-~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~-~~~~~~~~v~~~~-~~ 365 (421)
T 3l8a_A 289 RKFQYRQLANNQH-EVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVME-PEGTYLVWLDFSA-YA 365 (421)
T ss_dssp HHHHHHHHHTTCS-CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEEC-CSBSSEEEEECGG-GT
T ss_pred HHHHHHHHhcccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeC-CCeeEEEEEeccc-cC
Confidence 8887665443321 224444455555553 3455567778888999999998877888753 4466677788875 23
Q ss_pred HHHHHHHHHHH-hcCceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018243 302 LYAACLLKKLE-EHGVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 302 ~~~~~~~~~l~-~~gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.+..++.+.|. ++||.+.++ +..++|++++ .+++++++++++|+++++
T Consensus 366 ~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 366 IAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA--TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp CCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 46678999995 679999764 3578999996 799999999999998875
No 85
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=1.2e-32 Score=247.18 Aligned_cols=330 Identities=15% Similarity=0.117 Sum_probs=232.2
Q ss_pred ccccccCCCC------CChHHHHHHHHHcCCC-CCCccCCChHHHHHHHHHHHHh----CCC---CeEEcCCchHHHHHH
Q 018243 4 RTVDLRSDTV------TKPTEAMRAAMASAEV-DDDVLMHDPTAFRLETEMAKVM----GKE---AGLFVPSGTMGNLIS 69 (359)
Q Consensus 4 ~~id~~~~~~------~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~~----~~~---~~~~~~~gt~a~~~~ 69 (359)
.+|||..+.+ ..+.+.+.+++.+... ....|....+..++++.+++++ +.+ ..++++||++|+..+
T Consensus 38 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~~~ 117 (413)
T 3t18_A 38 AVINAALGTLLDDKGKIIALPSVYDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIRSA 117 (413)
T ss_dssp GCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHH
T ss_pred ceEeccccCccCCCCCcCChHHHHHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCccHHHHHHH
Confidence 5789998865 3344888898877532 1234666667889999999876 233 457778888899999
Q ss_pred HHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeec-CCCCCCCHHHHHHHhcCCCCCccCCcee-EEEEecccc
Q 018243 70 VLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN-NQDGTMDIDLIEAAIRDPKGEIVYPTTR-LICLENTHA 147 (359)
Q Consensus 70 l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~v~i~~~~~ 147 (359)
+..++ ++||+|+++.|+|.+... .+...|.+++.++. ++++.+|+++|++.+++... ++++ +++++++.+
T Consensus 118 ~~~~~-~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~----~~~~~~vi~~~p~~ 189 (413)
T 3t18_A 118 IFSYL-DEGDPLICHDYYWAPYRK---ICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIR----DSDRIASLINSPGN 189 (413)
T ss_dssp HHHHC-CSSCEEEEESSCCTHHHH---HHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHH----HCSEEEEEEECSSC
T ss_pred HHHhc-CCCCEEEECCCCcccHHH---HHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhh----cCCCEEEEEeCCCC
Confidence 99887 599999999999877553 36778889999976 45578999999999972000 1566 666655547
Q ss_pred CCCceecChhhHHHHHHHHH------HcCcEEEEecccccchhhhcCchhHhh---hc--Ccc---EEEEeccccCCCce
Q 018243 148 NCGGRCLSVEYTDSVGEIAK------KHGLKLHIDGARIFNAAVALGVPVRRL---VQ--AAD---SASVCLSKGLGAPV 213 (359)
Q Consensus 148 ~ptG~~~~~~~l~~i~~~~~------~~~~~li~D~a~~~~~~~~~~~~~~~~---~~--~~d---~~~~s~~K~~g~~~ 213 (359)
||||.+++.+++++|+++|+ +||+++|+||+|... .+.+.....+ .. ..+ +++.|+||.+|+++
T Consensus 190 NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G 267 (413)
T 3t18_A 190 NPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEF--AGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYG 267 (413)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGG--SSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGG
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccc--cCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcC
Confidence 79999999999999999999 899999999996432 2233222221 11 123 44459999998654
Q ss_pred e--eEEec---CHHHHHHHHHHHHhhC--CCcchhHHHHHHHHHHHH--------HhHHHHhhhHHHHHHHHHHHHhcCC
Q 018243 214 G--SVIVG---SKEFIKKARRLRKTLG--GGMRQVGVLCAAALVALQ--------ENVLVMLDGDHKKAKLLAEGLNQLK 278 (359)
Q Consensus 214 g--g~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~--------~~~~~~~~~~~~~~~~l~~~l~~~~ 278 (359)
. ||+++ ++++++.+........ .....+...+.++...++ ...++.++++.++++++.+.|+++
T Consensus 268 ~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 346 (413)
T 3t18_A 268 LRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKEN- 346 (413)
T ss_dssp GCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred cCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-
Confidence 2 88887 9999998876544321 111123333333333332 223335667788889999999998
Q ss_pred CceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 279 GLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 279 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
|+++. ++..+.++|+.+. +..++.+.|.++||.+.|+ ..++||+++ ..+++++ +++|.++++++.+
T Consensus 347 g~~~~-~~~~~~~~~~~~~-----~~~~~~~~l~~~gv~v~~g-~~~iRis~~-~~~~~~~---l~~l~~~l~~~~~ 412 (413)
T 3t18_A 347 KLTMI-PYFGGFFTFIPTD-----KAFDIVKDLEKENIFTIPS-AKGIRVAIC-GVGEEKI---PKLVQRLAFYTNK 412 (413)
T ss_dssp TCCCB-CCCSSSCEEEECS-----CHHHHHHHHHHTTEECEEC-SSEEEECTT-TSCGGGH---HHHHHHHHHHHHC
T ss_pred CCCcc-CCCceEEEEeCCC-----CHHHHHHHHHhCCEEEecC-CCceEEEEe-eCCHHHH---HHHHHHHHHHHhc
Confidence 88874 3446667777663 4668888899999999887 578999987 4566666 8888888877653
No 86
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=1.4e-33 Score=251.36 Aligned_cols=324 Identities=16% Similarity=0.135 Sum_probs=235.9
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCCC-----C---ccCC-ChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHH
Q 018243 4 RTVDLRSDTVTKPTEAMRAAMASAEVDD-----D---VLMH-DPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~~-----~---~~~~-~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~ 72 (359)
..++|..+....+++.+.+++.+..... . .|.. .+...++++.+++++|.+ ..++++||++|+..++..
T Consensus 16 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~ 95 (390)
T 1elu_A 16 NKTYFNFGGQGILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWG 95 (390)
T ss_dssp TSEECCTTTCCCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHH
T ss_pred CeEEecCCccCCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhC
Confidence 4577777766555577888887643221 1 2222 366789999999999986 457888999999999998
Q ss_pred h-hhhcCCeEEecCCCcceeeccc-cccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccC
Q 018243 73 H-CETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHAN 148 (359)
Q Consensus 73 ~-~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ 148 (359)
+ . ++|++|+++.++|.+..... ..++..|.+++.++.+ .++.+|+++|++.++ +++++|++++ ++|
T Consensus 96 ~~~-~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~--------~~~~~v~~~~-~~n 165 (390)
T 1elu_A 96 LDW-HQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLG--------PKTRLVILSH-LLW 165 (390)
T ss_dssp SCC-CTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCC--------TTEEEEEEES-BCT
T ss_pred CCC-CCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcC--------CCceEEEEec-ccc
Confidence 8 5 58999999999988764300 1235568888888765 577889999999988 6789999855 555
Q ss_pred CCceecChhhHHHHHHHHH----HcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHH
Q 018243 149 CGGRCLSVEYTDSVGEIAK----KHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEF 223 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~----~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~ 223 (359)
|||.+++ +++|.++|+ ++|+++|+|++|+++... ..... .+.|+++.|+||+++++.| |+++.++++
T Consensus 166 ptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~---~~~~~--~~~d~~~~s~~K~~~~~~g~G~~~~~~~~ 237 (390)
T 1elu_A 166 NTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGSLP---LDFSR--LEVDYYAFTGHKWFAGPAGVGGLYIHGDC 237 (390)
T ss_dssp TTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTTBC---CCTTT--SCCSEEEEESSSTTCCCTTCEEEEECTTT
T ss_pred CCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCCcC---CChhh--cCCCEEEccccccccCCCceEEEEECHHh
Confidence 9999998 899999999 999999999998765332 12212 2678999999997766667 888888887
Q ss_pred HHHHHHHH----------------------HhhCCCcchhHHHHHHH---HHHHHH--hHHHHhhhHHHHHHHHHHHHhc
Q 018243 224 IKKARRLR----------------------KTLGGGMRQVGVLCAAA---LVALQE--NVLVMLDGDHKKAKLLAEGLNQ 276 (359)
Q Consensus 224 ~~~~~~~~----------------------~~~~~~~~~~~~~~~~~---~~~l~~--~~~~~~~~~~~~~~~l~~~l~~ 276 (359)
.+.++... ....++. +....+++ +..++. +.++..++..++++++.+.|++
T Consensus 238 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~ 315 (390)
T 1elu_A 238 LGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATS--AYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQ 315 (390)
T ss_dssp GGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCC--CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhcCCccccCCcccccccCcccccccchHhhCCCCC--CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 76653211 1111122 22222222 223322 2455777888999999999999
Q ss_pred CCCceEecC-CccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC-CcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018243 277 LKGLRVDVD-AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES-STRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 277 ~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
+||+++..+ +..++++++.++.. .+..++.++|.++||.+.++. .+++||+++...+++++++++++|+++
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 316 LPHVHCLATSAPQAGLVSFTVDSP--LGHRAIVQKLEEQRIYLRTIADPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp STTEEESCSSCCSSSEEEEEECSS--SCHHHHHHHHHHTTEECEEETTTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred cCCcEEecCccccccEEEEEcCCC--CCHHHHHHHHHHCCEEEEecCCCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 889887543 34677777787531 367789999999999998874 679999998789999999999998753
No 87
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=7.6e-32 Score=242.56 Aligned_cols=309 Identities=13% Similarity=0.067 Sum_probs=220.5
Q ss_pred cCCChHHHHHHHHHHHHh----CCCC----------e-EEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeecccccc
Q 018243 34 LMHDPTAFRLETEMAKVM----GKEA----------G-LFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGIS 98 (359)
Q Consensus 34 ~~~~~~~~~l~~~la~~~----~~~~----------~-~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~ 98 (359)
|+...+..++++++++++ |.+. . ++++|+++++..++..++ ++||+|++++|+|..... .+
T Consensus 74 Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~---~~ 149 (425)
T 2r2n_A 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII-NPGDNVLLDEPAYSGTLQ---SL 149 (425)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHC-CTTCEEEEESSCCHHHHH---HH
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhC-CCCCEEEEeCCCcHHHHH---HH
Confidence 555566677777777764 6532 3 555666778888888887 599999999999887554 36
Q ss_pred ccCCccceeeecCCCCCCCHHHHHHHhcCCCCC----ccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEE
Q 018243 99 TIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGE----IVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLH 174 (359)
Q Consensus 99 ~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~----~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li 174 (359)
+..|.+++.++.+.++ +|+++|++.+++.... ...+++++|++.+.++||||.+++.+++++|+++|++||++||
T Consensus 150 ~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li 228 (425)
T 2r2n_A 150 HPLGCNIINVASDESG-IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLII 228 (425)
T ss_dssp GGGTCEEEEECEETTE-ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHcCCEEEEeCcCCCC-CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 7788899998776554 8999999999742100 0013578888867788899999999999999999999999999
Q ss_pred Eecccccchhhh-cCchhHhhhc-CccEEEEeccccCCCcee--eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHH
Q 018243 175 IDGARIFNAAVA-LGVPVRRLVQ-AADSASVCLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALV 250 (359)
Q Consensus 175 ~D~a~~~~~~~~-~~~~~~~~~~-~~d~~~~s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (359)
+||+|....+.. ...++..+.. +..+++.|+||+++ |+. ||+++++++++.+.........+. +...+.++..
T Consensus 229 ~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~~~~~~~~~~~--~~~~q~a~~~ 305 (425)
T 2r2n_A 229 EDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHP--STFNQLMISQ 305 (425)
T ss_dssp EECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEHHHHHHHHHHHHTTTCSS--CHHHHHHHHH
T ss_pred EECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCHHHHHHHHHHHHHhcCCC--CHHHHHHHHH
Confidence 999976433321 1123333321 22355669999998 442 889999999998877665544444 3334444444
Q ss_pred HHH--------HhHHHHhhhHHHHHHHHHHHHhc-CCCceEecCCccceEEEEEeccchHHHHHH-HHHHHHhcCceecc
Q 018243 251 ALQ--------ENVLVMLDGDHKKAKLLAEGLNQ-LKGLRVDVDAVETNIVYFEITEDSKLYAAC-LLKKLEEHGVLVMP 320 (359)
Q Consensus 251 ~l~--------~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~gi~~~~ 320 (359)
.++ .+.++.++++.++++++.+.|++ .|++.....+..++++|+.++.. .+..+ +.+.|.++||.+.|
T Consensus 306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~~~~l~~~gv~v~p 383 (425)
T 2r2n_A 306 LLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGI--NDVKELIEEKAVKMGVLMLP 383 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTC--SCCHHHHHTHHHHTTEECEE
T ss_pred HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCC--CCHHHHHHHHHHHCCcEEec
Confidence 443 33444566777888999999987 57774223456888999999752 23444 57788899999976
Q ss_pred CC---------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 321 ES---------STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 321 ~~---------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+. .+++|++++ ..+++++++++++|++++++.
T Consensus 384 g~~f~~~~~~~~~~iRis~~-~~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 384 GNAFYVDSSAPSPYLRASFS-SASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp GGGGSSSTTSCCCEEEEECS-SCCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcCCCCCCCCEEEEEeC-CCCHHHHHHHHHHHHHHHHHh
Confidence 42 468999997 369999999999999988753
No 88
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=100.00 E-value=5e-33 Score=246.32 Aligned_cols=323 Identities=19% Similarity=0.197 Sum_probs=238.7
Q ss_pred CccccccccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHh-hhhcCC
Q 018243 1 MVTRTVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVH-CETRGS 79 (359)
Q Consensus 1 ~~~~~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~-~~~~g~ 79 (359)
|.+.++||..+.+..+. +.+++.+..... .|...+...++++.++++++.+..++++||++|+..++..+ . ++|+
T Consensus 4 m~~~~~~l~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~~~~~~~-~~gd 79 (374)
T 3uwc_A 4 MRVPYSYLERQFADIEP--YLNDLREFIKTA-DFTLGAELEKFEKRFAALHNAPHAIGVGTGTDALAMSFKMLNI-GAGD 79 (374)
T ss_dssp CCBCSCCHHHHTSSCHH--HHHHHHHHHHHT-CCSSCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTC-CTTC
T ss_pred CcceeeccccCCCCchH--HHHHHHHHHHcC-CcccChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCC-CCCC
Confidence 34556888887776654 777766543222 46678899999999999999998899999999999999988 6 6999
Q ss_pred eEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhH
Q 018243 80 EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYT 159 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l 159 (359)
+|+++.++|.+... .+...|.+++.++.+.++.+|++++++.++ +++++|+ .+||||...+ +
T Consensus 80 ~v~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~--------~~~~~v~----~~n~~G~~~~---~ 141 (374)
T 3uwc_A 80 EVITCANTFIASVG---AIVQAGATPVLVDSENGYVIDPEKIEAAIT--------DKTKAIM----PVHYTGNIAD---M 141 (374)
T ss_dssp EEEEESSSCHHHHH---HHHHTTCEEEEECBCTTSSBCGGGTGGGCC--------TTEEEEC----CBCGGGCCCC---H
T ss_pred EEEECCCccHHHHH---HHHHcCCEEEEEecCCCCCcCHHHHHHhCC--------CCceEEE----EeCCcCCcCC---H
Confidence 99999999988765 367789999999887788899999999988 6788777 3459999776 8
Q ss_pred HHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEecc--ccCCC-ceeeEEec-CHHHHHHHHHHHHh--
Q 018243 160 DSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLS--KGLGA-PVGSVIVG-SKEFIKKARRLRKT-- 233 (359)
Q Consensus 160 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~--K~~g~-~~gg~~~~-~~~~~~~~~~~~~~-- 233 (359)
++|.++|++||+++|+|++|+.+... .+.. .....|++++|+| |++++ +.||+++. ++++.+.++.....
T Consensus 142 ~~i~~~~~~~~~~li~D~~~~~g~~~-~~~~---~~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~~ 217 (374)
T 3uwc_A 142 PALAKIAKKHNLHIVEDACQTILGRI-NDKF---VGSWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGL 217 (374)
T ss_dssp HHHHHHHHHTTCEEEEECTTCTTCEE-TTEE---TTSSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTTE
T ss_pred HHHHHHHHHcCCEEEEeCCCccCcee-CCee---ccccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcCc
Confidence 99999999999999999998765442 2222 2223688888866 99987 45676665 56777777655431
Q ss_pred --------hCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCC-ceEecCCccceE--EEEEeccchHH
Q 018243 234 --------LGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKG-LRVDVDAVETNI--VYFEITEDSKL 302 (359)
Q Consensus 234 --------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g-~~~~~~~~~~~~--~~~~~~~~~~~ 302 (359)
.+.+.......+++....++.. ++..++..++.+++.+.|+++++ +.+...+..... ..+.+...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 293 (374)
T 3uwc_A 218 INRDVCVEYGINCRMDTIQAVIANRLMNQL-ETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRVK--- 293 (374)
T ss_dssp EETTEESSCCCBCBCCHHHHHHHHHHGGGH-HHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEET---
T ss_pred cccCccccccccCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEcC---
Confidence 1223333445555544444433 43777888899999999999866 776322222222 22223221
Q ss_pred HHHHHHHHHHhcCceeccCC---------------------------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 303 YAACLLKKLEEHGVLVMPES---------------------------STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~~~~~---------------------------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+..++.+.|.++||.+.++. ...+|++++..++++|+++++++|++++++.
T Consensus 294 ~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~~ 371 (374)
T 3uwc_A 294 YRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLEK 371 (374)
T ss_dssp THHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 57789999999999886654 1679999999999999999999999988653
No 89
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=2.6e-32 Score=243.36 Aligned_cols=318 Identities=17% Similarity=0.181 Sum_probs=233.6
Q ss_pred ccCCCCCChHHHHHHHHHcCCCCCCccCC--ChHHHHHHHHHHHHhCCC---CeEEcCCchHHHHHHHHHhhhhcCCeEE
Q 018243 8 LRSDTVTKPTEAMRAAMASAEVDDDVLMH--DPTAFRLETEMAKVMGKE---AGLFVPSGTMGNLISVLVHCETRGSEVI 82 (359)
Q Consensus 8 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~~---~~~~~~~gt~a~~~~l~~~~~~~g~~vl 82 (359)
+.+..+..+++++.+++.+.... .|+. .+...++++.+++++|.+ ..++++||++|+..++..++ ++|++|+
T Consensus 37 l~~~~~~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~-~~gd~Vl 113 (393)
T 1vjo_A 37 LLGPGPSNAHPSVLQAMNVSPVG--HLDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAV-EPGDVVL 113 (393)
T ss_dssp ECSSSCCCCCHHHHHHHSSCCCC--TTSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHC-CTTCEEE
T ss_pred eccCCCCCCCHHHHHHHhccccc--ccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhcc-CCCCEEE
Confidence 44445566679999999886543 2332 245678888999999986 34677888899999999987 5999999
Q ss_pred ecCCCcce--eeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCC-ceeEEEEeccccCCCceecChhhH
Q 018243 83 LGDNSHIH--IYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYP-TTRLICLENTHANCGGRCLSVEYT 159 (359)
Q Consensus 83 ~~~~~~~~--~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~v~i~~~~~~ptG~~~~~~~l 159 (359)
+++|+|.+ ... .++..|.+++.++.+.++.+|+++|++.++ + ++++|++++ ++||||.+.+ +
T Consensus 114 ~~~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~--------~~~~~~v~~~~-~~nptG~~~~---l 178 (393)
T 1vjo_A 114 IGVAGYFGNRLVD---MAGRYGADVRTISKPWGEVFSLEELRTALE--------THRPAILALVH-AETSTGARQP---L 178 (393)
T ss_dssp EEESSHHHHHHHH---HHHHTTCEEEEEECCTTCCCCHHHHHHHHH--------HHCCSEEEEES-EETTTTEECC---C
T ss_pred EEcCChhHHHHHH---HHHHcCCceEEEecCCCCCCCHHHHHHHHh--------hCCceEEEEec-cCCCcceecc---H
Confidence 99999876 332 366788899999888788899999999998 5 788888855 5569999987 7
Q ss_pred HHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHH----HHh-
Q 018243 160 DSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRL----RKT- 233 (359)
Q Consensus 160 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~----~~~- 233 (359)
++|.++|+++|+++|+|++|+++.. ...... .+.|+++.|+||++++|.+ |++++++++++.++.. ...
T Consensus 179 ~~i~~l~~~~~~~li~Dea~~~g~~---~~~~~~--~~~di~~~s~sK~l~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~ 253 (393)
T 1vjo_A 179 EGVGELCREFGTLLLVDTVTSLGGV---PIFLDA--WGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWY 253 (393)
T ss_dssp TTHHHHHHHHTCEEEEECTTTTTTS---CCCTTT--TTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCST
T ss_pred HHHHHHHHHcCCEEEEECCccccCc---CCcccc--cCccEEEEcCcccccCCCceEEEEECHHHHHHHhccCCCCCcee
Confidence 8999999999999999999875432 222222 2678999999999988777 8999999888776321 000
Q ss_pred h------------CCCc-chhHHHHHHHHHHHHH----hHHHHhhhHHHHHHHHHHHHhcCCCceEecCCc--cceEEEE
Q 018243 234 L------------GGGM-RQVGVLCAAALVALQE----NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV--ETNIVYF 294 (359)
Q Consensus 234 ~------------~~~~-~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~--~~~~~~~ 294 (359)
. .... ..+...++++..+++. ..++.++++.++++++.+.|+++ ++++..+.. ...++++
T Consensus 254 ~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 332 (393)
T 1vjo_A 254 LDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLSLHVEKEYRLPTLTTV 332 (393)
T ss_dssp TCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEE
T ss_pred cCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCcccCCccccCCcEEEE
Confidence 0 0011 2233444444444533 24457778889999999999998 887753321 2456778
Q ss_pred EeccchHHHHHHHHHHHHhc-CceeccCC----CcEEEEEe-CCCCCHHHHHHHHHHHHHHHH
Q 018243 295 EITEDSKLYAACLLKKLEEH-GVLVMPES----STRVRIVV-HHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 295 ~~~~~~~~~~~~~~~~l~~~-gi~~~~~~----~~~lRi~~-~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.++. +.+..++.+.|.++ ||.+.++. ..++|+++ +...+++++++++++|+++++
T Consensus 333 ~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l~ 393 (393)
T 1vjo_A 333 CIPD--GVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVLR 393 (393)
T ss_dssp ECCT--TCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred EcCC--CCCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHhC
Confidence 7753 23677899999776 99997753 57899995 445677789999999998763
No 90
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.4e-32 Score=244.60 Aligned_cols=319 Identities=12% Similarity=0.106 Sum_probs=228.3
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCCC-----CccC----CChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHHh
Q 018243 5 TVDLRSDTVTKPTEAMRAAMASAEVDD-----DVLM----HDPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~~-----~~~~----~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~~ 73 (359)
.++|..+....+++.+.+++.+..... ..|. ..+...++++.+++++|.+ ..++++||++++..++.++
T Consensus 27 ~~~ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~~l 106 (406)
T 3cai_A 27 WVHFDAPAGMLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAEAS 106 (406)
T ss_dssp CEECBGGGCCCCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHT
T ss_pred eEEEeCCCcCCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHHHH
Confidence 455555555566677877776643211 1232 2456789999999999986 3466777777877777776
Q ss_pred --hhhcCCeEEecCCCcceeeccccccc---cCCccceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEecccc
Q 018243 74 --CETRGSEVILGDNSHIHIYENGGIST---IGGVHPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHA 147 (359)
Q Consensus 74 --~~~~g~~vl~~~~~~~~~~~~~~~~~---~~g~~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~ 147 (359)
..++|++|+++.++|.+.+. .... ..|.+++.++.+ +++.+|+++|++.++ +++++|+++++ +
T Consensus 107 ~~~~~~gd~vi~~~~~~~~~~~--~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~~-~ 175 (406)
T 3cai_A 107 SSRAGLGYEVIVSRLDDEANIA--PWLRAAHRYGAKVKWAEVDIETGELPTWQWESLIS--------KSTRLVAVNSA-S 175 (406)
T ss_dssp GGGGBTTCEEEEETTSCGGGTH--HHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCC--------TTEEEEEEESB-C
T ss_pred hhccCCCCEEEEcCCccHHHHH--HHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhC--------CCceEEEEeCC-c
Confidence 13589999999999988764 2122 268889989876 678899999999998 68999999655 5
Q ss_pred CCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceee-EEecCHHHHHH
Q 018243 148 NCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGS-VIVGSKEFIKK 226 (359)
Q Consensus 148 ~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg-~~~~~~~~~~~ 226 (359)
||||.+++ +++|.++|+++|+++|+|++|+.+... .....+ +.|+++.|+||++|.. +| +++.++++.+.
T Consensus 176 nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~---~~~~~~--~~d~~~~s~~K~~g~~-~G~~~~~~~~~~~~ 246 (406)
T 3cai_A 176 GTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAPYRL---LDIRET--DADVVTVNAHAWGGPP-IGAMVFRDPSVMNS 246 (406)
T ss_dssp TTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTTTCC---CCHHHH--CCSEEEEEGGGGTSCS-CEEEEESCHHHHHT
T ss_pred CCccccCC---HHHHHHHHHHcCCEEEEEcccccCCCC---CCchhc--CCCEEEeehhhhcCCC-cCeEEEEehHHHhh
Confidence 59999988 789999999999999999998764332 222333 6899999999988754 56 99999988776
Q ss_pred HHHHHHh--------h-CCCcchhHHHHHHHHHHH---HH---------------hHHHHhhhHHHHHHHHHHHHhcCCC
Q 018243 227 ARRLRKT--------L-GGGMRQVGVLCAAALVAL---QE---------------NVLVMLDGDHKKAKLLAEGLNQLKG 279 (359)
Q Consensus 227 ~~~~~~~--------~-~~~~~~~~~~~~~~~~~l---~~---------------~~~~~~~~~~~~~~~l~~~l~~~~g 279 (359)
++..... + .++. +....+++..++ .. ..++..++..++++++.+.|+++|+
T Consensus 247 l~~~~~~~~~~~~~~~~~~t~--~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 324 (406)
T 3cai_A 247 FGSVSTNPYATGPARLEIGVH--QFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPL 324 (406)
T ss_dssp SCCCCSCTTCCGGGGGCCSCC--CHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred cCCcccCCCCCccccccCCCc--cHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 5433211 1 1122 222222222222 22 2444667788899999999999888
Q ss_pred ceEecCC-ccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC-------------CcEEEEEeCCCCCHHHHHHHHHH
Q 018243 280 LRVDVDA-VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES-------------STRVRIVVHHQISANDVHYTLSC 345 (359)
Q Consensus 280 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-------------~~~lRi~~~~~~~~~~i~~~~~~ 345 (359)
+++..+. ..++++++.++. .+..++.+.|.++||.+.++. ..++|++++..++++++++++++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~ 401 (406)
T 3cai_A 325 VMLIGRPEAQIPVVSFAVHK---VPADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRA 401 (406)
T ss_dssp EEECCCCSSBCSEEEEEETT---BCHHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHH
T ss_pred eEEcCCccccCCEEEEEECC---cCHHHHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHH
Confidence 8875332 235577888764 367789999988999997654 37899999888899999999999
Q ss_pred HHH
Q 018243 346 FQK 348 (359)
Q Consensus 346 l~~ 348 (359)
|++
T Consensus 402 l~~ 404 (406)
T 3cai_A 402 LAS 404 (406)
T ss_dssp HHT
T ss_pred HHH
Confidence 875
No 91
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=7.5e-32 Score=244.18 Aligned_cols=337 Identities=14% Similarity=0.097 Sum_probs=231.6
Q ss_pred cccc-cccCCCCCChH---HHHHHHHHcCCCC-------C------CccCCChHHHHHHHHHHHHh------CC--CCeE
Q 018243 3 TRTV-DLRSDTVTKPT---EAMRAAMASAEVD-------D------DVLMHDPTAFRLETEMAKVM------GK--EAGL 57 (359)
Q Consensus 3 ~~~i-d~~~~~~~~~~---~~~~~a~~~~~~~-------~------~~~~~~~~~~~l~~~la~~~------~~--~~~~ 57 (359)
+.+| ||..+.+..+. +.+.+++.+...+ . ..|+..++..++++.+++++ +. +..+
T Consensus 31 ~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~ 110 (444)
T 3if2_A 31 DQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIA 110 (444)
T ss_dssp SSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEE
T ss_pred chhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEE
Confidence 4578 99998777643 5667777654333 2 23666667899999999997 22 3457
Q ss_pred EcCCchHHHHHHHHHhhhhcCC--------------eEEec-CCCcceeeccc---cccccCCccceeeecCC-C----C
Q 018243 58 FVPSGTMGNLISVLVHCETRGS--------------EVILG-DNSHIHIYENG---GISTIGGVHPRTVKNNQ-D----G 114 (359)
Q Consensus 58 ~~~~gt~a~~~~l~~~~~~~g~--------------~vl~~-~~~~~~~~~~~---~~~~~~g~~~~~v~~~~-~----~ 114 (359)
+++||++|+..++..++ ++|+ +|+++ .|+|....... ......|..++.++.+. + +
T Consensus 111 ~t~G~t~al~~~~~~l~-~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 189 (444)
T 3if2_A 111 LTNGSQNAFFYLFNLFG-GAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKY 189 (444)
T ss_dssp EESSHHHHHHHHHHHSS-EEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEE
T ss_pred EecCcHHHHHHHHHHHh-CCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccCcccc
Confidence 88888899999998887 4777 78775 88876654310 02344566777776554 2 3
Q ss_pred CCCHHHHHHH---hcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh
Q 018243 115 TMDIDLIEAA---IRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV 191 (359)
Q Consensus 115 ~~~~~~l~~~---l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~ 191 (359)
.+|+++|++. ++ +++++|+++++ +||||.+++.+++++|+++|++||+++|+|++|+...........
T Consensus 190 ~~d~~~l~~~l~~~~--------~~~~~v~i~~p-~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~ 260 (444)
T 3if2_A 190 RVDFEALENLPALKE--------GRIGAICCSRP-TNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDA 260 (444)
T ss_dssp ECCHHHHHTCHHHHT--------TCEEEEEEESS-CTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCC
T ss_pred CCCHHHHHHHHHhcC--------CCceEEEeCCC-CCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccc
Confidence 6899999988 45 68999999665 569999999999999999999999999999997532111000111
Q ss_pred HhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHH-----HhHHH-HhhhHH
Q 018243 192 RRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQ-----ENVLV-MLDGDH 264 (359)
Q Consensus 192 ~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~-~~~~~~ 264 (359)
.....+.++++.|+||+++.+.+ ||++.++++.+.+.......+.+.+.... .++...++ ....+ ..+.+.
T Consensus 261 ~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~a~~~~l~~~~~~~~~~~~~~~~~~ 338 (444)
T 3if2_A 261 HLNWDNNTILCFSLSKIGLPGMRTGIIVADAKVIEAVSAMNAVVNLAPTRFGA--AIATPLVANDRIKQLSDNEIKPFYQ 338 (444)
T ss_dssp CCCCCTTEEEEEESTTTTCGGGCCEEEECCHHHHHHHHHHHHHHHSSCCCHHH--HHHHHHHHTSHHHHHHHHTHHHHHH
T ss_pred cccCCCCEEEEechhhccCCCCceEEEEECHHHHHHHHHHHHhccCCCChHHH--HHHHHHHHcCchhHHHHHHHHHHHH
Confidence 11112445677799997332233 88999999999988776655444433332 23322232 11221 344556
Q ss_pred HHHHHHHHHHhc-CC--CceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCC--------------cEEE
Q 018243 265 KKAKLLAEGLNQ-LK--GLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESS--------------TRVR 327 (359)
Q Consensus 265 ~~~~~l~~~l~~-~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~--------------~~lR 327 (359)
++++.+.+.|++ ++ ++.+. .+..+.++|+.++. .+.+..++.+.|.++||.+.++.. .++|
T Consensus 339 ~~~~~~~~~l~~~l~~~~~~~~-~~~~g~~~~~~~~~-~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iR 416 (444)
T 3if2_A 339 KQATLAVKLLKQALGDYPLMIH-KPEGAIFLWLWFKD-LPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIR 416 (444)
T ss_dssp HHHHHHHHHHHHHSSSSSEEEE-CCCBSSEEEEEETT-CSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEE
T ss_pred HHHHHHHHHHHHhcccCCceEe-cCCccEEEEEEcCC-CCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEE
Confidence 666777777665 44 34553 34578899999875 124788899999999999976532 4799
Q ss_pred EEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 328 IVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 328 i~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
|+++. +++++++++++|.++++++..
T Consensus 417 is~~~--~~e~i~~~l~~l~~~~~~~~~ 442 (444)
T 3if2_A 417 MSIAA--DEQTLIDGIKVIGEVVRELYD 442 (444)
T ss_dssp EESSS--CHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeC--CHHHHHHHHHHHHHHHHHHHc
Confidence 99973 999999999999999988765
No 92
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=100.00 E-value=7e-32 Score=245.16 Aligned_cols=336 Identities=18% Similarity=0.239 Sum_probs=236.6
Q ss_pred ccccccCCCCC-ChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEE
Q 018243 4 RTVDLRSDTVT-KPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVI 82 (359)
Q Consensus 4 ~~id~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl 82 (359)
.++||.++... .+.+++.+++.. ....|...+...++++.++++++.+..++++||++|+..++.+++ ++|| +
T Consensus 43 ~ylD~~~~~~~~~~~~~~~~a~~~---~~~~y~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~al~~l~-~~gd--i 116 (456)
T 2ez2_A 43 IYIDLLTDSGTNAMSDKQWAGMMM---GDEAYAGSENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAI-KPGQ--Y 116 (456)
T ss_dssp CSEECSCSSSCCCCCHHHHHHHTT---CCCCSSSCHHHHHHHHHHHHHHCCSEEEEESSHHHHHHHHHHHHC-CTTC--E
T ss_pred ceeeeccccCCccCCHHHHHHhhc---chhhcccChhHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhC-CCCC--E
Confidence 35788776433 445888888874 334577788999999999999999888999999999999999887 5888 7
Q ss_pred ecCCCcceeeccccccccCCccceeeecCC----------CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018243 83 LGDNSHIHIYENGGISTIGGVHPRTVKNNQ----------DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----------~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
++.++|++.+. ..+...|.+++.++.+. ++.+|+++|++.+++.. ...+++|++++++|+|||.
T Consensus 117 ~~~~~~~~~~~--~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t----~~~~~~v~l~~p~n~ptG~ 190 (456)
T 2ez2_A 117 VAGNMYFTTTR--YHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKG----AENIAYICLAVTVNLAGGQ 190 (456)
T ss_dssp EEESSCCHHHH--HHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHC----GGGEEEEEEESSBTTTTSB
T ss_pred eccccccchhH--HHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhcc----ccceeEEEEeccCCCCCCc
Confidence 88888844443 23677888888886542 26789999999998210 0124888887666669999
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccch--------hhhcCchhHh----hhcCccEEEEeccccCCCceeeEEec-
Q 018243 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNA--------AVALGVPVRR----LVQAADSASVCLSKGLGAPVGSVIVG- 219 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~--------~~~~~~~~~~----~~~~~d~~~~s~~K~~g~~~gg~~~~- 219 (359)
+++.+++++|+++|++||+++|+|++|.+|. ..+.+....+ .....|++++|++|+++.+.||++++
T Consensus 191 ~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~~gG~~~~~ 270 (456)
T 2ez2_A 191 PVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNIGGFLCMN 270 (456)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCSSCEEEEES
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCCCCceeEEEEC
Confidence 9999999999999999999999999987641 2223333221 22356888889999877555788887
Q ss_pred CHHHHHHHHHHHHhh-C----CCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEE
Q 018243 220 SKEFIKKARRLRKTL-G----GGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYF 294 (359)
Q Consensus 220 ~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~ 294 (359)
++++.+.++...... + .+.+... ..+++...++...+...++..++.+++.+.|++. |+++.. +..++++|+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~a~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-p~~~~~~~~ 347 (456)
T 2ez2_A 271 DDEMFSSAKELVVVYEGMPSYGGLAGRD-MEAMAIGLREAMQYEYIEHRVKQVRYLGDKLKAA-GVPIVE-PVGGHAVFL 347 (456)
T ss_dssp CHHHHHHHHHHHHHHTCCTTTTTCCHHH-HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCCBCS-SCCSSEEEE
T ss_pred CHHHHHHHHHHHhhccCcccccCcchhH-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC-CCcccc-CCCceEEEE
Confidence 788888877655432 1 1111112 2221332222221235566677788899999886 877643 456788888
Q ss_pred Eecc---c---hHHHHHHHHHHH-HhcCceecc-C----------------CCcEEEEEeCCC-CCHHHHHHHHHHHHHH
Q 018243 295 EITE---D---SKLYAACLLKKL-EEHGVLVMP-E----------------SSTRVRIVVHHQ-ISANDVHYTLSCFQKI 349 (359)
Q Consensus 295 ~~~~---~---~~~~~~~~~~~l-~~~gi~~~~-~----------------~~~~lRi~~~~~-~~~~~i~~~~~~l~~~ 349 (359)
.+.. . .......+.++| .++||.+.+ + +..++|++++.. ++++++++++++|+++
T Consensus 348 ~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~ 427 (456)
T 2ez2_A 348 DARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKL 427 (456)
T ss_dssp EHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred EhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 7631 0 011134447777 788998643 1 136899999765 8999999999999999
Q ss_pred HHHHH
Q 018243 350 YAGVC 354 (359)
Q Consensus 350 ~~~~~ 354 (359)
+++..
T Consensus 428 l~~~~ 432 (456)
T 2ez2_A 428 YQHKE 432 (456)
T ss_dssp HHTGG
T ss_pred Hhhhh
Confidence 87754
No 93
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=100.00 E-value=1.1e-32 Score=251.28 Aligned_cols=337 Identities=18% Similarity=0.266 Sum_probs=227.1
Q ss_pred cccccccCCCCCChHHHHHHHHHcCCC-CCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhc----
Q 018243 3 TRTVDLRSDTVTKPTEAMRAAMASAEV-DDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETR---- 77 (359)
Q Consensus 3 ~~~id~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~---- 77 (359)
+.++||.++... |++.+++.+... +...|+..+...++++.++++++.+..++++||++|+..++..++. +
T Consensus 41 ~~ylD~~~~~~~---~~v~~a~~~~l~~~~~~y~~~~~~~~l~~~la~~~~~~~v~~t~~gt~A~~~al~~~~~-~~~~~ 116 (467)
T 2oqx_A 41 DVFIDLLTDSGT---GAVTQSMQAAMMRGDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIK-KREQE 116 (467)
T ss_dssp GCSEECSCCSSC---SCCCHHHHHHTTSCCCCSSSCHHHHHHHHHHHHHHCCSEEEEEC--CCSHHHHHHHHHH-HHHHH
T ss_pred CeeEecccCCCc---HHHHHHHHHHhccCcceeccCchhHHHHHHHHHHhCcCcEEEcCCcHHHHHHHHHHHhc-ccccc
Confidence 356888776655 445555544332 3346777888999999999999998889999999999999999884 6
Q ss_pred -C----CeEEecCCCcceeeccccccccCCcccee------eecC----CCCCCCHHHHHHHhcCCCCCccCCceeEEEE
Q 018243 78 -G----SEVILGDNSHIHIYENGGISTIGGVHPRT------VKNN----QDGTMDIDLIEAAIRDPKGEIVYPTTRLICL 142 (359)
Q Consensus 78 -g----~~vl~~~~~~~~~~~~~~~~~~~g~~~~~------v~~~----~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i 142 (359)
| |+|+++ +.|+..+. ......+..++. ++.+ .++.+|+++|++.+++.. .+++++|++
T Consensus 117 ~G~~~~d~Ii~~-~~h~~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~----~~~~~~vi~ 189 (467)
T 2oqx_A 117 KGLDRSKMVAFS-NYFFDTTQ--GHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVG----PNNVPYIVA 189 (467)
T ss_dssp HCCCTTTCEEEE-SSCCHHHH--HHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC----GGGCCCEEE
T ss_pred CCCCccceEEec-ccccccch--hhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcC----CCceeEEEE
Confidence 7 887776 56655432 112223332221 2222 356789999999998310 026889999
Q ss_pred eccccCCC-ceecChhhHHHHHHHHHHcCcEEEEeccccc-chh-------hhcCchhHhhh----cCccEEEEeccccC
Q 018243 143 ENTHANCG-GRCLSVEYTDSVGEIAKKHGLKLHIDGARIF-NAA-------VALGVPVRRLV----QAADSASVCLSKGL 209 (359)
Q Consensus 143 ~~~~~~pt-G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~-~~~-------~~~~~~~~~~~----~~~d~~~~s~~K~~ 209 (359)
++++| |+ |.+++.+++++|+++|++||+++|+|++|.+ +.. .+.+.+...+. ..+|++++|+||++
T Consensus 190 ~~~~n-~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~ 268 (467)
T 2oqx_A 190 TITSN-SAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDA 268 (467)
T ss_dssp ESSBC-GGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTT
T ss_pred ecccc-CCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEeccccc
Confidence 76654 76 8999999999999999999999999988766 432 23344444432 35788888999999
Q ss_pred CCceeeEEecCHH-HHHHHHHHHHh---hCC--Ccch-hHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhcCCCce
Q 018243 210 GAPVGSVIVGSKE-FIKKARRLRKT---LGG--GMRQ-VGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQLKGLR 281 (359)
Q Consensus 210 g~~~gg~~~~~~~-~~~~~~~~~~~---~~~--~~~~-~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~~~g~~ 281 (359)
|+|.||+++++++ +++.+..+... .+. .... .....++....++... ++.+++..++++++.+.|+++ ++.
T Consensus 269 g~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~ 347 (467)
T 2oqx_A 269 MVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI-GVV 347 (467)
T ss_dssp CCSSCEEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred CCCCceEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHC-CCe
Confidence 9887888887665 44443333222 111 1111 1111111122223322 124455667889999999988 887
Q ss_pred EecCCccceEEEEEecc-----c-hHHHHHHHHHHH-HhcCceeccCC-----------------CcEEEEEeCCC-CCH
Q 018243 282 VDVDAVETNIVYFEITE-----D-SKLYAACLLKKL-EEHGVLVMPES-----------------STRVRIVVHHQ-ISA 336 (359)
Q Consensus 282 ~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~l-~~~gi~~~~~~-----------------~~~lRi~~~~~-~~~ 336 (359)
+. +..+.++|+.++. + ...+...+.+.| .++||.+.+++ .+++|++++.. +++
T Consensus 348 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~ 425 (467)
T 2oqx_A 348 CQ--QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQ 425 (467)
T ss_dssp EE--EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCH
T ss_pred ee--cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCH
Confidence 75 3467788888742 1 111256678899 99999997633 26899999877 999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 018243 337 NDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 337 ~~i~~~~~~l~~~~~~~~ 354 (359)
+++++++++|++++++..
T Consensus 426 e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 426 THMDFIIEAFKHVKENAA 443 (467)
T ss_dssp HHHHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHhhhh
Confidence 999999999999988754
No 94
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=100.00 E-value=7.5e-32 Score=240.40 Aligned_cols=323 Identities=17% Similarity=0.202 Sum_probs=236.5
Q ss_pred cccccccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHh-hhhcCCeE
Q 018243 3 TRTVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVH-CETRGSEV 81 (359)
Q Consensus 3 ~~~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~-~~~~g~~v 81 (359)
+.+|+|.. +..| +++.+++.+..... .+..++...++++.++++++.+..++++||++|+..++.++ + ++|++|
T Consensus 8 ~~~i~~~~--p~~~-~~~~~a~~~~~~~~-~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~al~~~~~~~~~-~~gd~V 82 (393)
T 1mdo_A 8 SDFLPFSR--PAMG-AEELAAVKTVLDSG-WITTGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGI-GEGDEV 82 (393)
T ss_dssp -CCBCSCC--CCCC-HHHHHHHHHHHHHT-CCSSSHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTC-CTTCEE
T ss_pred ccccccCC--CCCC-HHHHHHHHHHHhcC-CcCCChHHHHHHHHHHHHhCCCcEEEecChHHHHHHHHHHcCC-CCCCEE
Confidence 34688887 3343 55666666543222 24467889999999999999988899999999999999998 6 589999
Q ss_pred EecCCCcceeeccccccccCCccceeeecCCC-CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHH
Q 018243 82 ILGDNSHIHIYENGGISTIGGVHPRTVKNNQD-GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTD 160 (359)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~ 160 (359)
+++.++|.+... .++..|++++.++.+++ +.+|+++|++.++ +++++|++++ |||.+.+ ++
T Consensus 83 l~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~----~~G~~~~---~~ 144 (393)
T 1mdo_A 83 ITPSMTWVSTLN---MIVLLGANPVMVDVDRDTLMVTPEHIEAAIT--------PQTKAIIPVH----YAGAPAD---LD 144 (393)
T ss_dssp EEESSSCHHHHH---HHHHTTCEEEEECBCTTTCCBCHHHHHHHCC--------TTEEEECCBC----GGGCCCC---HH
T ss_pred EeCCCccHhHHH---HHHHCCCEEEEEeccCCcCCCCHHHHHHhcC--------CCceEEEEeC----CCCCcCC---HH
Confidence 999999988654 36778999999987654 6799999999998 6788888743 7888765 89
Q ss_pred HHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEecc--ccCCCceeeEEecC-HHHHHHHHHHHHhh---
Q 018243 161 SVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLS--KGLGAPVGSVIVGS-KEFIKKARRLRKTL--- 234 (359)
Q Consensus 161 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~--K~~g~~~gg~~~~~-~~~~~~~~~~~~~~--- 234 (359)
+|.++|+++|+++|+|++|+.|... .+.. +.. .|+++.|+| |+++++.+|+++.+ +++.+.++......
T Consensus 145 ~i~~l~~~~~~~li~D~a~~~g~~~-~~~~---~~~-~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~ 219 (393)
T 1mdo_A 145 AIYALGERYGIPVIEDAAHATGTSY-KGRH---IGA-RGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGV 219 (393)
T ss_dssp HHHHHHHHHTCCBCEECTTCTTCEE-TTEE---TTS-SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEEC
T ss_pred HHHHHHHHcCCeEEEECccccCCeE-CCee---cCC-CCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCcc
Confidence 9999999999999999998765432 2222 211 788888988 99976666888875 88888876543321
Q ss_pred -------------------CCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCC-----ccce
Q 018243 235 -------------------GGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDA-----VETN 290 (359)
Q Consensus 235 -------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-----~~~~ 290 (359)
|.+....++.++++...++... +..++..++++++.+.|+++ ++++...+ ..+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~-~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~ 297 (393)
T 1mdo_A 220 DAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLD-ALNARRAAIAAQYHQAMADL-PFQPLSLPSWEHIHAWH 297 (393)
T ss_dssp C-----------CCEESSCCCBCCCCHHHHHHHHHHHHTHH-HHHHHHHHHHHHHHHHHHTS-SCEECCCCSSCEECCCS
T ss_pred cchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcC-CcccccCCCCCCCceeE
Confidence 1112234555555555555433 36667778899999999998 47763222 2345
Q ss_pred EEEEEeccc-hHHHHHHHHHHHHhcCceeccCC-------------------------CcEEEEEeCCCCCHHHHHHHHH
Q 018243 291 IVYFEITED-SKLYAACLLKKLEEHGVLVMPES-------------------------STRVRIVVHHQISANDVHYTLS 344 (359)
Q Consensus 291 ~~~~~~~~~-~~~~~~~~~~~l~~~gi~~~~~~-------------------------~~~lRi~~~~~~~~~~i~~~~~ 344 (359)
++++.++.. .+.+..++.+.|.++||.+.++. ...+|++++..++++|++++++
T Consensus 298 ~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~ 377 (393)
T 1mdo_A 298 LFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVIT 377 (393)
T ss_dssp CEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHH
T ss_pred EEEEEecccccccCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHH
Confidence 688888630 01367889999999999886643 2269999988899999999999
Q ss_pred HHHHHHHHHHh
Q 018243 345 CFQKIYAGVCE 355 (359)
Q Consensus 345 ~l~~~~~~~~~ 355 (359)
+|+++++...-
T Consensus 378 ~l~~~~~~~~~ 388 (393)
T 1mdo_A 378 ALHQIAGQGSH 388 (393)
T ss_dssp HHHHHHC----
T ss_pred HHHHHHhcCCc
Confidence 99999877653
No 95
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=6.7e-32 Score=237.22 Aligned_cols=308 Identities=13% Similarity=0.109 Sum_probs=224.2
Q ss_pred ccccccCCCCCChH-HHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC-e-EEcCCchHHHHHHHHHhhhhcC-C
Q 018243 4 RTVDLRSDTVTKPT-EAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA-G-LFVPSGTMGNLISVLVHCETRG-S 79 (359)
Q Consensus 4 ~~id~~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~-~~~~~gt~a~~~~l~~~~~~~g-~ 79 (359)
.+|||+++.+..++ |.+ + ......|... ...++++.++++++.+. . ++++||++++..++.+++ ++| +
T Consensus 30 ~~i~l~~~~~~~~~~~~v--a----~~~~~~Y~~~-~~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~-~~g~d 101 (356)
T 1fg7_A 30 GDVWLNANEYPTAVEFQL--T----QQTLNRYPEC-QPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFC-EPGKD 101 (356)
T ss_dssp CSEECSSCCCSSCCCCCC--C----CCCTTSCCCS-SCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHC-CTTTC
T ss_pred ceEEeeCCCCCCCCCHhH--h----hhhhccCCCc-cHHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHh-CCCCC
Confidence 56899998655443 555 2 2233445543 37899999999999863 3 555666778888888887 589 9
Q ss_pred eEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhH
Q 018243 80 EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYT 159 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l 159 (359)
+|+++.|+|..... .+...|.+++.++.++++.+|++++++.++ ++++|++++ ++||||.++|.+++
T Consensus 102 ~Vl~~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---------~~~~v~l~~-p~nptG~~~~~~~l 168 (356)
T 1fg7_A 102 AILYCPPTYGMYSV---SAETIGVECRTVPTLDNWQLDLQGISDKLD---------GVKVVYVCS-PNNPTGQLINPQDF 168 (356)
T ss_dssp EEEECSSSCTHHHH---HHHHHTCEEEECCCCTTSCCCHHHHHTSCT---------TEEEEEEES-SCTTTCCCCCHHHH
T ss_pred EEEEeCCChHHHHH---HHHHcCCEEEEeeCCCCCCCCHHHHHHHhc---------CCCEEEEeC-CCCCCCCCCCHHHH
Confidence 99999999877554 366778899888877777889998887664 467888865 56799999999999
Q ss_pred HHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh--cCccEEEEeccccCCCcee--eEEecCHHHHHHHHHHHHhhC
Q 018243 160 DSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV--QAADSASVCLSKGLGAPVG--SVIVGSKEFIKKARRLRKTLG 235 (359)
Q Consensus 160 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d~~~~s~~K~~g~~~g--g~~~~~~~~~~~~~~~~~~~~ 235 (359)
++|+++|+ +|+++|+||+|..+.. +.+...+. .+.++++.|+||++|.++. |++++++++++.++.....+
T Consensus 169 ~~l~~~~~-~~~~li~De~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~- 243 (356)
T 1fg7_A 169 RTLLELTR-GKAIVVADEAYIEFCP---QASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPY- 243 (356)
T ss_dssp HHHHHHHT-TTCEEEEECTTGGGSG---GGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHHHHHHHHHSCSS-
T ss_pred HHHHHhCC-CCCEEEEEccchhhcC---CCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCHHHHHHHHHhcCCC-
Confidence 99999999 9999999999764331 22222221 1334666799999985442 88888999988877654433
Q ss_pred CCcchhHHHHHHHHHHHHH--h--HHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHH
Q 018243 236 GGMRQVGVLCAAALVALQE--N--VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKL 311 (359)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~--~--~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (359)
..+...+.++..+++. . .++.+++..++++++.+.|++++++.... +..++++|+.++ +..++.++|
T Consensus 244 ---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~-----~~~~l~~~L 314 (356)
T 1fg7_A 244 ---PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVF-DSETNYILARFK-----ASSAVFKSL 314 (356)
T ss_dssp ---CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEEC-CCSSSEEEEEET-----THHHHHHHH
T ss_pred ---CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEC-CCCCeEEEEECC-----CHHHHHHHH
Confidence 2344555555555532 2 45566778888999999999985542222 457889999886 356889999
Q ss_pred HhcCceecc-CC----CcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018243 312 EEHGVLVMP-ES----STRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 312 ~~~gi~~~~-~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
.++||.+.+ +. .+++|++++ +++++++++++|+++
T Consensus 315 ~~~gI~v~~~g~~~~~~~~iRis~~---~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 315 WDQGIILRDQNKQPSLSGCLRITVG---TREESQRVIDALRAE 354 (356)
T ss_dssp HHTTEECEECTTSTTCTTEEEEECC---CHHHHHHHHHHHHTC
T ss_pred HHCCEEEEECCCCCCCCCeEEEEeC---CHHHHHHHHHHHHhh
Confidence 999999988 43 358999994 689999999998753
No 96
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=1.2e-31 Score=236.16 Aligned_cols=313 Identities=14% Similarity=0.116 Sum_probs=228.3
Q ss_pred ccccccCCCCCCh-HHHHHHHHHcCCCCC----CccCCChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHHhhhh
Q 018243 4 RTVDLRSDTVTKP-TEAMRAAMASAEVDD----DVLMHDPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLVHCET 76 (359)
Q Consensus 4 ~~id~~~~~~~~~-~~~~~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~~~~~ 76 (359)
.+|||.++.+..+ +|.+.+++.+..... ..|. .+...++++.+++++|.+ ..++++||++|+..++..++ +
T Consensus 27 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~-~~~~~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~~l~-~ 104 (360)
T 3hdo_A 27 SWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYP-SASSQKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAFA-A 104 (360)
T ss_dssp TSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCC-CSSCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHC-C
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCC-CCchHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHHh-C
Confidence 4799998866544 589999998765442 2343 345689999999999954 45788888899999999887 5
Q ss_pred cCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecCh
Q 018243 77 RGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSV 156 (359)
Q Consensus 77 ~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~ 156 (359)
+||+|+++.|+|.+... .++..|.+++.++.++++.+ ++++ +. .++++++++++ +||||.++|
T Consensus 105 ~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~--~~l~---~~-------~~~~~v~i~~p-~nptG~~~~- 167 (360)
T 3hdo_A 105 EGEEIGYVHPSYSYYGT---LAEVQGARVRTFGLTGDFRI--AGFP---ER-------YEGKVFFLTTP-NAPLGPSFP- 167 (360)
T ss_dssp TTCEEEEESSSCTHHHH---HHHHHTCEEEEECBCTTSSB--TTCC---SS-------BCSSEEEEESS-CTTTCCCCC-
T ss_pred CCCEEEEcCCChHHHHH---HHHHCCCEEEEeeCCCCCCH--HHHH---hh-------cCCCEEEEeCC-CCCCCCCcC-
Confidence 99999999999887654 36777889999987766544 2222 21 24567888555 669999999
Q ss_pred hhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh-h-cCccEEEEeccccCCCce-e-eEEecCHHHHHHHHHHHH
Q 018243 157 EYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL-V-QAADSASVCLSKGLGAPV-G-SVIVGSKEFIKKARRLRK 232 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~-~~~d~~~~s~~K~~g~~~-g-g~~~~~~~~~~~~~~~~~ 232 (359)
++++.++|+++|+++|+|++|+.. . +.....+ . .+.++++.|+||++|.++ + |+++.++++.+.++....
T Consensus 168 --~~~l~~l~~~~~~~li~De~~~~~--~--~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~ 241 (360)
T 3hdo_A 168 --LEYIDELARRCAGMLVLDETYAEF--A--ESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEVIAALDKIRD 241 (360)
T ss_dssp --HHHHHHHHHHBSSEEEEECTTGGG--S--SCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHHHHHHHHHSC
T ss_pred --HHHHHHHHHHCCCEEEEECChHhh--C--CcchhHHhccCCCEEEEecchHhhcCCccceeeEeeCHHHHHHHHHhCC
Confidence 577888889999999999997542 1 1111111 1 133355669999997543 2 888899999988776553
Q ss_pred hhCCCcchhHHHHHHHHHHHH--HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHH
Q 018243 233 TLGGGMRQVGVLCAAALVALQ--ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKK 310 (359)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (359)
. +..+...++++..+++ .+.++.+++..++++++.+.|+++ ++.+. +..++++|+.++. .+..++.+.
T Consensus 242 ~----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~--~~~~~~~~~~~~~---~~~~~l~~~ 311 (360)
T 3hdo_A 242 H----YNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSI-GYDVI--PSQGNYLFATPPD---RDGKRVYDG 311 (360)
T ss_dssp S----CCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEC--CCSSSEEEEECTT---CCHHHHHHH
T ss_pred C----CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEc--CCCccEEEEECCC---CCHHHHHHH
Confidence 3 2234555555555554 334557777888999999999998 88874 4478888888764 367889999
Q ss_pred HHhcCceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 311 LEEHGVLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 311 l~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
|.++||.+.+++ ..++|++++ +++++++++++|+++.+...
T Consensus 312 l~~~gi~v~~~~~~~~~~~iRis~~---~~~e~~~l~~al~~~~~~~~ 356 (360)
T 3hdo_A 312 LYARKVLVRHFSDPLLAHGMRISIG---TREEMEQTLAALKEIGEGHH 356 (360)
T ss_dssp HHHTTEECBCCCSTTTTTSEEEECC---CHHHHHHHHHHHHHHHC---
T ss_pred HHHCCEEEEECCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHhcccc
Confidence 999999997754 478999984 89999999999987776543
No 97
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=5.5e-32 Score=241.53 Aligned_cols=322 Identities=16% Similarity=0.142 Sum_probs=232.5
Q ss_pred CCCCCChHHHHHHHHHcCCCCCCccCC--ChHHHHHHHHHHHHhCCCC---eEEcCCchHHHHHHHHHhhhhcCCeEEec
Q 018243 10 SDTVTKPTEAMRAAMASAEVDDDVLMH--DPTAFRLETEMAKVMGKEA---GLFVPSGTMGNLISVLVHCETRGSEVILG 84 (359)
Q Consensus 10 ~~~~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~~~---~~~~~~gt~a~~~~l~~~~~~~g~~vl~~ 84 (359)
+.++..+++.+.+++.+..... |.. .+...++++.++++++.+. .++++||++++..++..++ ++|++|+++
T Consensus 23 ~~~p~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~-~~gd~vl~~ 99 (396)
T 2ch1_A 23 GPGPSNCSKRVLTAMTNTVLSN--FHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLL-EEGDRVLIA 99 (396)
T ss_dssp SSSSCCCCHHHHHHTTSCCCCT--TCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHC-CTTCEEEEE
T ss_pred cCCCCCCCHHHHHHhccccccC--CChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhc-CCCCeEEEE
Confidence 3345556689999998865332 322 2347899999999999874 3566778899999998887 599999999
Q ss_pred CCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCC-ceeEEEEeccccCCCceecChhhHHHHH
Q 018243 85 DNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYP-TTRLICLENTHANCGGRCLSVEYTDSVG 163 (359)
Q Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~v~i~~~~~~ptG~~~~~~~l~~i~ 163 (359)
+|+|.+... ...++..|++++.++.+.++.+|+++|++.++ + ++++|++++ ++||||.+++ +++|.
T Consensus 100 ~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~--------~~~~~~v~~~~-~~nptG~~~~---~~~i~ 166 (396)
T 2ch1_A 100 VNGIWAERA-VEMSERYGADVRTIEGPPDRPFSLETLARAIE--------LHQPKCLFLTH-GDSSSGLLQP---LEGVG 166 (396)
T ss_dssp ESSHHHHHH-HHHHHHTTCEEEEEECCTTSCCCHHHHHHHHH--------HHCCSEEEEES-EETTTTEECC---CTTHH
T ss_pred cCCcccHHH-HHHHHHcCCceEEecCCCCCCCCHHHHHHHHH--------hCCCCEEEEEC-CCCCCceecC---HHHHH
Confidence 999887521 02367789899999887788899999999998 5 788999855 5569999998 78999
Q ss_pred HHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHH------------
Q 018243 164 EIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRL------------ 230 (359)
Q Consensus 164 ~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~------------ 230 (359)
++|+++|+++|+|++|.++... .....+ ++|+++.|+||+++++.| |+++.++++++.+...
T Consensus 167 ~l~~~~~~~li~Dea~~~g~~~---~~~~~~--~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (396)
T 2ch1_A 167 QICHQHDCLLIVDAVASLCGVP---FYMDKW--EIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLL 241 (396)
T ss_dssp HHHHHTTCEEEEECTTTBTTBC---CCTTTT--TCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHH
T ss_pred HHHHHcCCEEEEEccccccCCc---cchhhc--CcCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceEechH
Confidence 9999999999999998765321 122222 578888899999877666 8888898887775421
Q ss_pred --HHhhC------CC-cchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCc---cceEEEE
Q 018243 231 --RKTLG------GG-MRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV---ETNIVYF 294 (359)
Q Consensus 231 --~~~~~------~~-~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~---~~~~~~~ 294 (359)
...++ .. ...+.....++..+++ ...++.++++.++++++.+.|+++ |+++..+.. .+.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~ 320 (396)
T 2ch1_A 242 LLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLDIFVKDPRHRLPTVTGI 320 (396)
T ss_dssp HHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBSSCSGGGBCTTEEEE
T ss_pred HHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCeeccCCccccCCceEEE
Confidence 00111 00 1112222333333333 334456778888999999999998 887753321 1237788
Q ss_pred EeccchHHHHHHHHHHHHh-cCceeccC----CCcEEEEEe-CCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 295 EITEDSKLYAACLLKKLEE-HGVLVMPE----SSTRVRIVV-HHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 295 ~~~~~~~~~~~~~~~~l~~-~gi~~~~~----~~~~lRi~~-~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
.++. +.+..++.++|.+ +||.+.++ ..+++|+++ ....+++++++++++|+++++++..
T Consensus 321 ~~~~--~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~ 385 (396)
T 2ch1_A 321 MIPK--GVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHP 385 (396)
T ss_dssp ECCT--TCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCT
T ss_pred EcCC--CCCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCc
Confidence 8753 2467889999965 59999764 357899999 4466899999999999999987753
No 98
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=100.00 E-value=1.7e-31 Score=236.58 Aligned_cols=322 Identities=15% Similarity=0.167 Sum_probs=233.6
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhh--hhcCCeEE
Q 018243 5 TVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHC--ETRGSEVI 82 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~--~~~g~~vl 82 (359)
.|.|.. ..++|.+.+++.+..... .+.+++...++++.+++++|.+..++++||++|+..++.++. .++|++|+
T Consensus 3 ~i~~~~---~~~~~~v~~a~~~~~~~~-~~~~~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl 78 (375)
T 2fnu_A 3 EFAYSE---PCLDKEDKKAVLEVLNSK-QLTQGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEII 78 (375)
T ss_dssp CEESCC---CCCCHHHHHHHHHHHTSS-CCSSSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEE
T ss_pred ccccCC---CCCCHHHHHHHHHHHHcC-cccCChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcccCCCCCEEE
Confidence 456643 344577888887754332 244578889999999999999978899999999999999982 25899999
Q ss_pred ecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHH
Q 018243 83 LGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSV 162 (359)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i 162 (359)
++.++|.+... . +...|++++.++.+.++.+|+++|++.++ +++++|+++++ ||.+.+ +++|
T Consensus 79 ~~~~~~~~~~~-~--~~~~g~~~~~~~~~~~~~~d~~~l~~~i~--------~~~~~v~~~~~----tG~~~~---l~~i 140 (375)
T 2fnu_A 79 TTPISFVATAN-M--LLESGYTPVFAGIKNDGNIDELALEKLIN--------ERTKAIVSVDY----AGKSVE---VESV 140 (375)
T ss_dssp ECSSSCTHHHH-H--HHHTTCEEEECCBCTTSSBCGGGSGGGCC--------TTEEEEEEECG----GGCCCC---HHHH
T ss_pred ECCCccHhHHH-H--HHHCCCEEEEeccCCCCCCCHHHHHhhcC--------cCceEEEEeCC----cCCccC---HHHH
Confidence 99999988765 2 66688899999887777889999999887 67888777554 798877 7999
Q ss_pred HHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEecc--ccCCCceeeEEec-CHHHHHHHHHHHHhh-----
Q 018243 163 GEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLS--KGLGAPVGSVIVG-SKEFIKKARRLRKTL----- 234 (359)
Q Consensus 163 ~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~--K~~g~~~gg~~~~-~~~~~~~~~~~~~~~----- 234 (359)
.++|++||+++|+|++|+++... .+..... ..|+++.|+| |+++.+.|++++. ++++.+.++......
T Consensus 141 ~~l~~~~~~~li~D~a~~~~~~~-~~~~~~~---~~~i~~~s~s~~K~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (375)
T 2fnu_A 141 QKLCKKHSLSFLSDSSHALGSEY-QNKKVGG---FALASVFSFHAIKPITTAEGGAVVTNDSELHEKMKLFRSHGMLKKD 216 (375)
T ss_dssp HHHHHHHTCEEEEECTTCTTCEE-TTEETTS---SSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTTEEESS
T ss_pred HHHHHHcCCEEEEECccccCCeE-CCeeccc---cCCeEEEeCCCCCCccccCceEEEeCCHHHHHHHHHHHhcCCcccc
Confidence 99999999999999998765442 1211111 1256656666 9997544455553 477888776554221
Q ss_pred ---------CCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCC----ccceEEEEEeccchH
Q 018243 235 ---------GGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDA----VETNIVYFEITEDSK 301 (359)
Q Consensus 235 ---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~----~~~~~~~~~~~~~~~ 301 (359)
+.+.......++++...++ ..++..++..++++++.+.|+++|++++..++ ....++++.++. .+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 294 (375)
T 2fnu_A 217 FFEGEVKSIGHNFRLNEIQSALGLSQLK-KAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQ-KF 294 (375)
T ss_dssp SSCEEESSCCCBCCCCHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECG-GG
T ss_pred ccccccccccccCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCc-cc
Confidence 1111234444444444443 33447778888999999999998888874331 122345677764 23
Q ss_pred H-HHHHHHHHHHhcCceecc----CC---------------------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 302 L-YAACLLKKLEEHGVLVMP----ES---------------------STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 302 ~-~~~~~~~~l~~~gi~~~~----~~---------------------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
. +..++.+.|.++||.+.. .. ...+|++++..++++++++++++|+++++++.
T Consensus 295 ~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~~ 373 (375)
T 2fnu_A 295 FTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESFK 373 (375)
T ss_dssp GGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred cchHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3 678899999999999862 10 15799999888999999999999999988764
No 99
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=100.00 E-value=1.1e-31 Score=240.84 Aligned_cols=326 Identities=19% Similarity=0.162 Sum_probs=230.8
Q ss_pred ccccccCC---CCC-ChHHHHHHHHHcCCCCCCc---cCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhh
Q 018243 4 RTVDLRSD---TVT-KPTEAMRAAMASAEVDDDV---LMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCET 76 (359)
Q Consensus 4 ~~id~~~~---~~~-~~~~~~~~a~~~~~~~~~~---~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~ 76 (359)
.++||.++ ++. .++|++.+++.+....... ....+...++++.+++++|.+..++++||++|+..++..+...
T Consensus 58 ~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~ggteA~~~al~~~~~~ 137 (420)
T 2pb2_A 58 EYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDATFAERVLFMNSGTEANETAFKLARHY 137 (420)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTTSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCCCCeEEEeCCHHHHHHHHHHHHHHH
Confidence 57899876 333 4468888888775433211 1245778999999999999887899999999999999988632
Q ss_pred ------cC-CeEEecCCCcceeeccccccccCCcc------------ceeeecCCCCCCCHHHHHHHhcCCCCCccCCce
Q 018243 77 ------RG-SEVILGDNSHIHIYENGGISTIGGVH------------PRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTT 137 (359)
Q Consensus 77 ------~g-~~vl~~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 137 (359)
+| ++|++.+++|..... ......|.+ +..++.+ |+++|++.++ +++
T Consensus 138 ~~~~~~~g~~~vi~~~~~yh~~~~--~~~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~le~~i~--------~~~ 202 (420)
T 2pb2_A 138 ACVRHSPFKTKIIAFHNAFHGRSL--FTVSVGGQPKYSDGFGPKPADIIHVPFN-----DLHAVKAVMD--------DHT 202 (420)
T ss_dssp HHHHTCTTCCEEEEETTCCCCSSH--HHHHHSSCHHHHTTSSSCCSCEEEECTT-----CHHHHHHHCC--------TTE
T ss_pred hhhccCCCCCEEEEEeCCcCCcCH--HHHHhcCCccccccCCCCCCCeEEecCC-----CHHHHHHHhc--------cCc
Confidence 56 489998888765443 123333432 3333332 8999999998 689
Q ss_pred eEEEEeccccCCCc-eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh--HhhhcCccEEEEeccccCCCcee
Q 018243 138 RLICLENTHANCGG-RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV--RRLVQAADSASVCLSKGLGAPVG 214 (359)
Q Consensus 138 ~~v~i~~~~~~ptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~~d~~~~s~~K~~g~~~g 214 (359)
++|+++++ +|++| .+++.+++++|+++|++||+++|+||+|. + +...+... .......|++ |++|+++++..
T Consensus 203 ~~vi~~p~-~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~-g-~~~~g~~~~~~~~~~~~dii--t~sK~l~~G~~ 277 (420)
T 2pb2_A 203 CAVVVEPI-QGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQC-G-MGRTGDLFAYMHYGVTPDIL--TSAKALGGGFP 277 (420)
T ss_dssp EEEEECSE-ETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-T-TTTTSSSSHHHHHTCCCSEE--EECGGGGTTSC
T ss_pred eEEEEeCC-cCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCc-C-cccCCcHHHHHhcCCCCCeE--EecccccCCCc
Confidence 99999665 55888 46888999999999999999999999984 2 22223221 2222356766 67899975333
Q ss_pred -eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhcC----CCceEecCCcc
Q 018243 215 -SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQL----KGLRVDVDAVE 288 (359)
Q Consensus 215 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~~----~g~~~~~~~~~ 288 (359)
|+++.++++++.+... ..+.++..+++.++++..+++... ++..++..++++++.+.|+++ |.+... +..
T Consensus 278 iG~~~~~~~l~~~l~~~--~~~~t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~~~ 353 (420)
T 2pb2_A 278 VSAMLTTQEIASAFHVG--SHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDI--RGM 353 (420)
T ss_dssp CEEEEECHHHHTTCC------CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE--EEE
T ss_pred eEEEEEhHHHHHhhcCC--CcCcccCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE--Eec
Confidence 7777888877665432 233444456666777776665432 236667778888888888764 333322 236
Q ss_pred ceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 289 TNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+.++++.++.....+..++.+.|.++||.+.+++..++|++++...+++++++++++|+++++++
T Consensus 354 g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~~~iRl~~~~~~t~eei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 354 GLLIGAELKPKYKGRARDFLYAGAEAGVMVLNAGADVMRFAPSLVVEEADIHEGMQRFAQAVGKV 418 (420)
T ss_dssp TTEEEEEECGGGTTCHHHHHHHHHHTTEECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEECCCchHHHHHHHHHHHHCCCEEEeCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 78888888652111467899999889999999888899999888899999999999999998775
No 100
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=2.6e-32 Score=251.25 Aligned_cols=335 Identities=13% Similarity=0.100 Sum_probs=232.8
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHh----CC-------CCeEEcCCchHHHHHHHHH
Q 018243 4 RTVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVM----GK-------EAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~-------~~~~~~~~gt~a~~~~l~~ 72 (359)
.+|+|..+.+..++|.+.+++.+......++....+..++++.+++++ +. +..++++||++|+..++..
T Consensus 104 ~~i~l~~g~~~~~~~~~v~a~~~~~~~~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~ 183 (533)
T 3f6t_A 104 DAVNYCHTELGLNRDKVVAEWVNGAVANNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHS 183 (533)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHH
T ss_pred hheeccCCCCCcCCcHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHH
Confidence 357888888877777777766654444444445667788999888887 32 2346667777888888887
Q ss_pred h----hhhcCCeEEecCCCcceeeccccccccCCccceeeecC----CCCCCCHHHHHHHhcCCCCCccCCceeEEEEec
Q 018243 73 H----CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN----QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLEN 144 (359)
Q Consensus 73 ~----~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~ 144 (359)
+ +.++||+|+++.|+|.+... .+...|.+++.++.+ .++.+|+++|++.++ +++++|++++
T Consensus 184 l~~~~l~~~gd~Viv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~--------~~~k~v~l~~ 252 (533)
T 3f6t_A 184 LAENHLLKKGDKIAINEPIFTPYLR---IPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKD--------PSIKALIVVN 252 (533)
T ss_dssp HHHTTSSCTTCEEEEESSCCHHHHT---SGGGGGSEEEEECCCEETTTTSEECHHHHHHHSC--------TTEEEEEEES
T ss_pred hhhhhccCCcCEEEEcCCCcHHHHH---HHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhC--------CCCeEEEEeC
Confidence 3 33699999999999988654 366778788877653 457889999999998 7899999975
Q ss_pred cccCCCceecChhhHHHHHHHHH-HcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee--eEEecCH
Q 018243 145 THANCGGRCLSVEYTDSVGEIAK-KHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG--SVIVGSK 221 (359)
Q Consensus 145 ~~~~ptG~~~~~~~l~~i~~~~~-~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g--g~~~~~~ 221 (359)
+ +||||.+++.+++++|+++|+ +||+++|+|++|.... +...+......+.++++.|+||.+|.++. |++++++
T Consensus 253 p-~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~--~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~ 329 (533)
T 3f6t_A 253 P-TNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFV--PNFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGVIALNE 329 (533)
T ss_dssp S-CTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGS--TTCCCHHHHSGGGEEEEEESHHHHTCGGGCEEEEEEES
T ss_pred C-CCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccc--cCccCHhhcCCCCEEEEecCcccCCCcccceEEEEECc
Confidence 5 569999999999999999999 6899999999975322 22334444433344677799999986542 7777755
Q ss_pred H-----HHHHH--------------------------------HHHHHhhCCCcchhHHHHHH--HHHHHH---------
Q 018243 222 E-----FIKKA--------------------------------RRLRKTLGGGMRQVGVLCAA--ALVALQ--------- 253 (359)
Q Consensus 222 ~-----~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~--~~~~l~--------- 253 (359)
+ +++.+ +........+.+...+.+++ +..++.
T Consensus 330 ~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~ 409 (533)
T 3f6t_A 330 KNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDD 409 (533)
T ss_dssp SCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBC
T ss_pred HHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchH
Confidence 4 32221 11111222233222222221 334442
Q ss_pred HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccch--------------HHHHHHHHHHH-HhcCcee
Q 018243 254 ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDS--------------KLYAACLLKKL-EEHGVLV 318 (359)
Q Consensus 254 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l-~~~gi~~ 318 (359)
...++.++++.++++.+.+.|. . ++.+. .+..+.++|+.++.-. ..+..++...| .++||.+
T Consensus 410 ~~~~~~~~~~~~r~~~l~~~L~-~-~~~~~-~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v 486 (533)
T 3f6t_A 410 PYIDIARKLVSERYDQLHDAMQ-A-PKDET-DTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVL 486 (533)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-C-CCCCS-TTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSS
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-C-Ccccc-CCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEE
Confidence 4455567778889999999997 6 66653 4567788888876300 01344555555 7899999
Q ss_pred ccCC-----CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 018243 319 MPES-----STRVRIVVHHQISANDVHYTLSCFQKIYAGVCEE 356 (359)
Q Consensus 319 ~~~~-----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 356 (359)
.|+. .+++|+++. .++++++++++++|.++++++.++
T Consensus 487 ~pg~~f~~~~~~iRls~a-~~~~e~i~~~i~~L~~~l~~~~~~ 528 (533)
T 3f6t_A 487 VDGVGFGAKPGELRVSQA-NLPTEDYALIGKQVLELLKEYYEE 528 (533)
T ss_dssp CTTEEECSSTTEEEEESS-SSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCcccCCCCCEEEEEEe-eCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8763 578999995 478999999999999999988754
No 101
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=1.1e-31 Score=237.08 Aligned_cols=313 Identities=17% Similarity=0.133 Sum_probs=226.5
Q ss_pred cccccCCCCC-ChHHHHHHHHHcCCCC----CCccCCChHHHHHHHHHHHH------hCCC-Ce-EEcCCchHHHHHHHH
Q 018243 5 TVDLRSDTVT-KPTEAMRAAMASAEVD----DDVLMHDPTAFRLETEMAKV------MGKE-AG-LFVPSGTMGNLISVL 71 (359)
Q Consensus 5 ~id~~~~~~~-~~~~~~~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~------~~~~-~~-~~~~~gt~a~~~~l~ 71 (359)
.|||.++.+. +++|.+.+++.+.... ...|+.... .++++.++++ ++.+ .. ++++||++++..++.
T Consensus 32 ~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~ 110 (369)
T 3cq5_A 32 DIRLNTNENPYPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQ 110 (369)
T ss_dssp SEECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHH
T ss_pred ceeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHH
Confidence 3889888664 4558888887764322 234544334 6899999998 4433 23 555555677778888
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCC-ceeEEEEeccccCCC
Q 018243 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYP-TTRLICLENTHANCG 150 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~v~i~~~~~~pt 150 (359)
+++ ++|++|++++|+|.+... .+...|.+++.++.+.++.+|++++++.++ + ++++|++++ ++|||
T Consensus 111 ~l~-~~gd~Vl~~~~~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~--------~~~~~~v~~~~-~~npt 177 (369)
T 3cq5_A 111 AFG-GPGRTALGFQPSYSMHPI---LAKGTHTEFIAVSRGADFRIDMDVALEEIR--------AKQPDIVFVTT-PNNPT 177 (369)
T ss_dssp HHC-STTCEEEEEESSCTHHHH---HHHHTTCEEEEEECCTTSSCCHHHHHHHHH--------HHCCSEEEEES-SCTTT
T ss_pred Hhc-CCCCEEEEcCCChHHHHH---HHHHcCCEEEEecCCcCCCCCHHHHHHHhh--------ccCCCEEEEeC-CCCCC
Confidence 877 589999999999887654 366778899999877777899999999998 4 788999855 55699
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhc--C-ccEEEEeccccCCCce--eeEEecCHHHHH
Q 018243 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQ--A-ADSASVCLSKGLGAPV--GSVIVGSKEFIK 225 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~--~-~d~~~~s~~K~~g~~~--gg~~~~~~~~~~ 225 (359)
|.++| ++++.++++.+++++|+|++|+.+... .+...+.. + .++++.|+||++|.++ .|++++++++.+
T Consensus 178 G~~~~---~~~l~~l~~~~~~~li~De~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 251 (369)
T 3cq5_A 178 GDVTS---LDDVERIINVAPGIVIVDEAYAEFSPS---PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFID 251 (369)
T ss_dssp CCCCC---HHHHHHHHHHCSSEEEEECTTGGGCCS---CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHH
T ss_pred CCCCC---HHHHHHHHHhCCCEEEEECCchhhcCC---cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHH
Confidence 99998 466666666777999999998654421 22222211 2 3466779999998543 288888888887
Q ss_pred HHHHHHHhhCCCcchhHHHHHHHHHHHHH--hHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHH
Q 018243 226 KARRLRKTLGGGMRQVGVLCAAALVALQE--NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLY 303 (359)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 303 (359)
.+......+ ..+...++++..+++. ..++.++++.++++++.+.|++. |+++. +..++++++.++. +
T Consensus 252 ~l~~~~~~~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~----~ 320 (369)
T 3cq5_A 252 AVMLVRLPY----HLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEEL-GYAVV--PSESNFVFFGDFS----D 320 (369)
T ss_dssp HHHTTSCTT----CSCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHH-TCEEE--CCSSSEEEEECCS----S
T ss_pred HHHHcCCCC----CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEC--CCCCeEEEEECCC----C
Confidence 765443322 2344555555555542 34456677888899999999886 88875 3467888888763 5
Q ss_pred HHHHHHHHHhcCceeccCC-CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018243 304 AACLLKKLEEHGVLVMPES-STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 304 ~~~~~~~l~~~gi~~~~~~-~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
..++.+.|.++||.+.+++ ..++|++++ +++++++++++|+++++
T Consensus 321 ~~~l~~~l~~~gi~v~~~~~~~~iRis~~---~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 321 QHAAWQAFLDRGVLIRDVGIAGHLRTTIG---VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp HHHHHHHHHHTTEECBCCSCTTEEEEECC---CHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCEEEEECCCCCeEEEEeC---CHHHHHHHHHHHHHHHh
Confidence 6789999999999998863 578999995 78999999999998764
No 102
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1e-31 Score=239.79 Aligned_cols=315 Identities=16% Similarity=0.089 Sum_probs=228.3
Q ss_pred CChHHHHHHHHHcCCCCCC-ccCC----ChHHHHHHHHHHHHhCCCCe--EEcCCchHHHHHHHHHhhhh----------
Q 018243 14 TKPTEAMRAAMASAEVDDD-VLMH----DPTAFRLETEMAKVMGKEAG--LFVPSGTMGNLISVLVHCET---------- 76 (359)
Q Consensus 14 ~~~~~~~~~a~~~~~~~~~-~~~~----~~~~~~l~~~la~~~~~~~~--~~~~~gt~a~~~~l~~~~~~---------- 76 (359)
..++|++.+++.+...... .+.. .+...++++.+++++|.+.. ++++||++|+..++..+...
T Consensus 40 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~ 119 (397)
T 3f9t_A 40 SNVLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLS 119 (397)
T ss_dssp CCCCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhccc
Confidence 3455788888877543311 1111 33446788899999998764 88899999999999998852
Q ss_pred --cCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCC-ceeEEEEeccccCCCcee
Q 018243 77 --RGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYP-TTRLICLENTHANCGGRC 153 (359)
Q Consensus 77 --~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~v~i~~~~~~ptG~~ 153 (359)
+|++|+++.++|.+... .+...|.+++.++.++++.+|+++|++.++ + ++++|++++++ ||||.+
T Consensus 120 ~~~gd~vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~--------~~~~~~v~~~~~~-nptG~~ 187 (397)
T 3f9t_A 120 KNEHPKIIVPITAHFSFEK---GREMMDLEYIYAPIKEDYTIDEKFVKDAVE--------DYDVDGIIGIAGT-TELGTI 187 (397)
T ss_dssp CCSSCEEEEETTCCTHHHH---HHHHHTCEEEEECBCTTSSBCHHHHHHHHH--------HSCCCEEEEEBSC-TTTCCB
T ss_pred CCCCeEEEECCcchhHHHH---HHHHcCceeEEEeeCCCCcCCHHHHHHHHh--------hcCCeEEEEECCC-CCCCCC
Confidence 38999999999988664 366779999999988889999999999998 5 78899886654 699998
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc---------hhHhhhcCccEEEEeccccCCCcee-eEEe-cCHH
Q 018243 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV---------PVRRLVQAADSASVCLSKGLGAPVG-SVIV-GSKE 222 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~---------~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~-~~~~ 222 (359)
.+ +++|.++|++||+++|+|++|+.+.....+. ...... +.|+++.|+||+++++.+ |+++ .++.
T Consensus 188 ~~---l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~ 263 (397)
T 3f9t_A 188 DN---IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGHCPIPSGGILFKDIG 263 (397)
T ss_dssp CC---HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTCCCSSCEEEEESSGG
T ss_pred CC---HHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccCCCCCceEEEEeCHH
Confidence 76 8999999999999999999987655433321 111112 678999999999865544 5444 4655
Q ss_pred HHHHHHHHHHhhCC--------Ccc-hhHHHHHHHHHHH-HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEE
Q 018243 223 FIKKARRLRKTLGG--------GMR-QVGVLCAAALVAL-QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIV 292 (359)
Q Consensus 223 ~~~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~ 292 (359)
+.+.++........ +.. .+...+.++...+ ....++..++..++++++.+.|+++ ++++..+ ..++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~ 341 (397)
T 3f9t_A 264 YKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN-NFKPVIE-PILNIV 341 (397)
T ss_dssp GGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSC-CSSSEE
T ss_pred HHHhhccCCccccCCCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcC-CCccEE
Confidence 55443221222111 111 1223333333333 2334447777889999999999999 8886443 467788
Q ss_pred EEEeccchHHHHHHHHHHHHhcCceeccCC-CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018243 293 YFEITEDSKLYAACLLKKLEEHGVLVMPES-STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
++.++. ..++.+.|.++||.+.++. +.++|++++..++++++++++++|+++++
T Consensus 342 ~~~~~~-----~~~~~~~l~~~gi~v~~~~~~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 342 AIEDED-----YKEVCKKLRDRGIYVSVCNCVKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp EEECTT-----HHHHHHHHHHTTCBCEECSSSSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred EEEeCC-----HHHHHHHHHhCCeEEeccCCCCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 877653 5688999988999998775 58999999888899999999999998865
No 103
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=6.7e-32 Score=239.19 Aligned_cols=317 Identities=18% Similarity=0.159 Sum_probs=224.8
Q ss_pred ccccccCCCC---CC-hHHHHHHHHHcCCCC----CCccCCChHHHHHHHHHHHHhCC-CCeEEcCCchHHHHHHHHHh-
Q 018243 4 RTVDLRSDTV---TK-PTEAMRAAMASAEVD----DDVLMHDPTAFRLETEMAKVMGK-EAGLFVPSGTMGNLISVLVH- 73 (359)
Q Consensus 4 ~~id~~~~~~---~~-~~~~~~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~~~-~~~~~~~~gt~a~~~~l~~~- 73 (359)
.++||.++.+ .+ ++|.+.+++.+.... ...| ..+...++++.+++++|. +..++++||++|+..++..+
T Consensus 29 ~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~l~~~la~~~g~~~~v~~~~g~t~a~~~~~~~~~ 107 (375)
T 2eh6_A 29 EYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLY-ENPWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLAR 107 (375)
T ss_dssp EEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTTB-CCHHHHHHHHHHHHTSSSCEEEEEESSHHHHHHHHHHHHH
T ss_pred EEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCccc-CCHHHHHHHHHHHhhcCCCCeEEEeCchHHHHHHHHHHHH
Confidence 4688887642 23 567888877664321 1234 356788999999999998 66688899999999988753
Q ss_pred -hh---hcC-CeEEecCCCcceeeccccccccCCcc------------ceeeecCCCCCCCHHHHHHHhcCCCCCccCCc
Q 018243 74 -CE---TRG-SEVILGDNSHIHIYENGGISTIGGVH------------PRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPT 136 (359)
Q Consensus 74 -~~---~~g-~~vl~~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 136 (359)
.. ++| ++|++++++|..... ......+.. +..++. .|+++|++.++ ++
T Consensus 108 ~~~~~~~~g~~~vl~~~~~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~--------~~ 172 (375)
T 2eh6_A 108 KYWRDKGKNKWKFISFENSFHGRTY--GSLSATGQPKFHKGFEPLVPGFSYAKL-----NDIDSVYKLLD--------EE 172 (375)
T ss_dssp HHHHHTTCCCCEEEEEBTCCCCSSH--HHHHHCBCGGGTTTTCSCCSSEEEECT-----TCHHHHHTTCC--------TT
T ss_pred HHhccCCCCCCEEEEECCCcCCCch--hhhhhcCCccccCCCCCCCCCceeCCC-----chHHHHHHHhc--------CC
Confidence 22 467 899999998665443 112222211 222222 38999999888 68
Q ss_pred eeEEEEeccccCCCceec-ChhhHHHHHHHHHHcCcEEEEecccc-cchhhhcCchhHhhhcCccEEEEeccccCCCcee
Q 018243 137 TRLICLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARI-FNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG 214 (359)
Q Consensus 137 ~~~v~i~~~~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~-~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g 214 (359)
+++|++++ ++||||.+. +.+++++|.++|++||+++|+|++|+ ++... .......+....|++ |+||+++++.+
T Consensus 173 ~~~v~~~~-~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~d~~--s~SK~~~~g~~ 248 (375)
T 2eh6_A 173 TAGIIIEV-IQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTG-EFYAYQHFNLKPDVI--ALAKGLGGGVP 248 (375)
T ss_dssp EEEEEECS-EETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS-SSSGGGGGTCCCSEE--EECGGGGTTSC
T ss_pred eEEEEEeC-ccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCC-cchhhhhcCCCCCEE--EEcccccCCCC
Confidence 99999955 677999984 57889999999999999999999986 32211 111222232236766 55699986555
Q ss_pred -eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEE
Q 018243 215 -SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVY 293 (359)
Q Consensus 215 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~ 293 (359)
|+++.++++++.++.. ..+.++..++..++++..+++... +..++..++++++.+.|++++. ... +..+++++
T Consensus 249 ~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~l~~~L~~~~~-~~~--~~~g~~~~ 322 (375)
T 2eh6_A 249 IGAILAREEVAQSFTPG--SHGSTFGGNPLACRAGTVVVDEVE-KLLPHVREVGNYFKEKLKELGK-GKV--KGRGLMLG 322 (375)
T ss_dssp CEEEEEEHHHHTTCCTT--SCCCSSTTCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTS-SEE--EEETTEEE
T ss_pred eEEEEEcHHHHhhhcCC--CCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhc-CCc--eEEEEEEE
Confidence 8888888877665431 133344445566666666666544 4677888899999999998843 322 34678899
Q ss_pred EEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 294 FEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 294 ~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
+.++. +..++.+.|.++||.+.+++..++|++++...+++++++++++|++++
T Consensus 323 ~~~~~----~~~~~~~~l~~~gi~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 375 (375)
T 2eh6_A 323 LELER----ECKDYVLKALEKGLLINCTAGKVLRFLPPLIIQKEHIDRAISVLREIL 375 (375)
T ss_dssp EECSS----CCHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred EEEcC----cHHHHHHHHHHCCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 98865 356788999889999988878899999988899999999999998753
No 104
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=2.2e-31 Score=232.40 Aligned_cols=309 Identities=17% Similarity=0.148 Sum_probs=221.0
Q ss_pred cccccccCC-CCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCC-eEEcCCch-HHHHHHHHHhhhhcCC
Q 018243 3 TRTVDLRSD-TVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEA-GLFVPSGT-MGNLISVLVHCETRGS 79 (359)
Q Consensus 3 ~~~id~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~gt-~a~~~~l~~~~~~~g~ 79 (359)
.++|||.++ ++.+|+|.+.+++.+.......| +.+...++++.++++++.+. .+++++|+ +++..++..+ +|+
T Consensus 16 ~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~y-~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~---~gd 91 (337)
T 3p1t_A 16 AQAVCLAFNENPEAVEPRVQAAIAAAAARINRY-PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF---SSM 91 (337)
T ss_dssp CCCEECSSCCCCSCCCHHHHHHHHHHGGGTTSC-CTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS---TTS
T ss_pred CCceEeeCCCCCCCCCHHHHHHHHHhhhhhccC-CCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc---CCC
Confidence 357999998 55567799999998865555556 35788999999999999864 45555554 5555555554 899
Q ss_pred eEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhH
Q 018243 80 EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYT 159 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l 159 (359)
+|+++.|+|.+... .++..|.+++.++.++++.+|++++++. .++++++++++ +||||.++| +
T Consensus 92 ~vl~~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~----------~~~~~v~i~~p-~nptG~~~~---~ 154 (337)
T 3p1t_A 92 RFVTAWPGFDGYRA---RIAVSGLRHFEIGLTDDLLLDPNDLAQV----------SRDDCVVLANP-SNPTGQALS---A 154 (337)
T ss_dssp EEEEESSSCSHHHH---HHTTSCCEEEEECBCTTSSBCHHHHTTC----------CTTEEEEEESS-CTTTCCCCC---H
T ss_pred eEEEeCCCcHHHHH---HHHHcCCEEEEecCCCCCCCCHHHHHhh----------cCCCEEEEeCC-CCCCCCCCC---H
Confidence 99999999887654 3777899999998888888999988764 24678888565 569999999 5
Q ss_pred HHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCce-e-eEEecCHHHHHHHHHHHHhhCCC
Q 018243 160 DSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV-G-SVIVGSKEFIKKARRLRKTLGGG 237 (359)
Q Consensus 160 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~-g-g~~~~~~~~~~~~~~~~~~~~~~ 237 (359)
+++.++|+++++ +|+|++|.. +...+...... ...++++.|+||++|.++ + ||+++++++++.++.....
T Consensus 155 ~~l~~l~~~~~~-~ivDea~~~--~~~~~~~~~~~-~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~---- 226 (337)
T 3p1t_A 155 GELDQLRQRAGK-LLIDETYVD--YSSFRARGLAY-GENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWF---- 226 (337)
T ss_dssp HHHHHHHHHCSE-EEEECTTGG--GSSCSSSCCCC-BTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTTSCT----
T ss_pred HHHHHHHHhCCc-EEEECCChh--hcccccccccc-CCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhhcCC----
Confidence 667777888887 566999743 21111111111 234567779999998433 3 8999999998887554322
Q ss_pred cchhHHHHHHHHHHHHH--hHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcC
Q 018243 238 MRQVGVLCAAALVALQE--NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHG 315 (359)
Q Consensus 238 ~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 315 (359)
...+...+.++..+++. ..++.+++..++++++.+.|+++ |+.+. +..++++++..+. ..++.+.|.++|
T Consensus 227 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~-----~~~~~~~l~~~g 298 (337)
T 3p1t_A 227 CNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVA--SSEANFVLVENAA-----GERTLRFLRERG 298 (337)
T ss_dssp TCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBC--CCSSSEEEEECTT-----THHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-cCEEC--CCCCeEEEEEcCC-----HHHHHHHHHHCC
Confidence 22233444444455532 23346666777889999999998 88764 3467788877654 346778889999
Q ss_pred ceeccCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018243 316 VLVMPES----STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 316 i~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
|.+.++. .+++|++++ +++++++++++|+++.+
T Consensus 299 i~v~~g~~~~~~~~iRis~~---~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 299 IQVKDAGQFGLHHHIRISIG---REEDNDRLLAALAEYSD 335 (337)
T ss_dssp EECEEGGGGTCCSEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred eEEEECccCCCCCeEEEecC---CHHHHHHHHHHHHHHhh
Confidence 9997764 578999984 78999999999988754
No 105
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=1.2e-31 Score=238.85 Aligned_cols=322 Identities=16% Similarity=0.131 Sum_probs=228.5
Q ss_pred cccccccCCCCC----ChHHHHHHHHHcCCCCCC---ccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018243 3 TRTVDLRSDTVT----KPTEAMRAAMASAEVDDD---VLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~~~~----~~~~~~~~a~~~~~~~~~---~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.+++||.++... ..+|.+.+++.+...... .....+...++++.+++++|.+..++++||++|+..++..+..
T Consensus 36 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~~gt~a~~~al~~~~~ 115 (392)
T 3ruy_A 36 NRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTNKEMVLPMNTGAEAVETAIKTARR 115 (392)
T ss_dssp CEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHH
T ss_pred CEEEEcCCChhhhccCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcCCCEEEEeCcHHHHHHHHHHHHHH
Confidence 356888876432 235888888876543211 1233567899999999999987789999999999999998774
Q ss_pred h--------c-CCeEEecCCCcceeeccccccccCCc------------cceeeecCCCCCCCHHHHHHHhcCCCCCccC
Q 018243 76 T--------R-GSEVILGDNSHIHIYENGGISTIGGV------------HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVY 134 (359)
Q Consensus 76 ~--------~-g~~vl~~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~ 134 (359)
. + +++|++..++|.+... ......+. .+..++.+ |+++|++.++
T Consensus 116 ~~~~~~~~~~~~~~vi~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~-------- 180 (392)
T 3ruy_A 116 WAYDVKKVEANRAEIIVCEDNFHGRTM--GAVSMSSNEEYKRGFGPMLPGIIVIPYG-----DLEALKAAIT-------- 180 (392)
T ss_dssp HHHHTSCCCTTCCEEEEETTCCCCSSH--HHHHTCSCTTTTTTCCSCCSSEEEECTT-----CHHHHHHHCC--------
T ss_pred hhhhccCCCCCCcEEEEEcCCcCCCCH--hhhhccCChhhccccCCCCCCCeeeCcc-----cHHHHHHHhc--------
Confidence 2 2 5699999999866543 11222111 12233332 8999999998
Q ss_pred CceeEEEEeccccCCCceecChhh-HHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCc-
Q 018243 135 PTTRLICLENTHANCGGRCLSVEY-TDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAP- 212 (359)
Q Consensus 135 ~~~~~v~i~~~~~~ptG~~~~~~~-l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~- 212 (359)
+++++|+++++ +||||.+++.++ +++|.++|++||+++|+||+|+..................|++ ++||+++++
T Consensus 181 ~~~~~v~~~~~-~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--~~SK~l~gG~ 257 (392)
T 3ruy_A 181 PNTAAFILEPI-QGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMY--ILGKALGGGV 257 (392)
T ss_dssp TTEEEEEECSS-BSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGTTT
T ss_pred cCeEEEEEeCc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEE--EEchhhhCCh
Confidence 78999999774 669999996655 9999999999999999999984211111111111222245666 556988752
Q ss_pred -eeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhcC--CCceEecCCcc
Q 018243 213 -VGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQL--KGLRVDVDAVE 288 (359)
Q Consensus 213 -~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~~--~g~~~~~~~~~ 288 (359)
..|++++++++.+.+.... .+.++..++..++++..+++... ++..++..++++++.+.|+++ +.+... +..
T Consensus 258 ~~~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~ 333 (392)
T 3ruy_A 258 FPISCAAANRDILGVFEPGS--HGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDNPMITEV--RGK 333 (392)
T ss_dssp SCCEEEEECHHHHTTCCTTS--SCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCCCTTEEEE--EEE
T ss_pred hhhEEEEECHHHHhhhccCC--cCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhcCCCceEE--Eee
Confidence 3488888988877654332 23334446666666666665432 335667888899999999987 234432 336
Q ss_pred ceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 289 TNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
++++++.++. +..++.+.|.++||.+.+++..++|++++...+++++++++++|++++
T Consensus 334 g~~~~~~~~~----~~~~l~~~l~~~gi~v~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 334 GLFIGIELNE----PARPYCEQLKAAGLLCKETHENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp TTEEEEEESS----CSHHHHHHHHTTTEECCCBTTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEcc----hHHHHHHHHHHCCcEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 7777777764 567899999999999999989999999888999999999999999876
No 106
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=6.2e-32 Score=238.45 Aligned_cols=327 Identities=12% Similarity=0.123 Sum_probs=230.7
Q ss_pred cccccccCCCCCChHHHHHHHHHcCCCCCCccC-CChHHHHHHHHH-HHHhC-CCCeEEcCCchHHHHHHHHHhhhhcCC
Q 018243 3 TRTVDLRSDTVTKPTEAMRAAMASAEVDDDVLM-HDPTAFRLETEM-AKVMG-KEAGLFVPSGTMGNLISVLVHCETRGS 79 (359)
Q Consensus 3 ~~~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~l~~~l-a~~~~-~~~~~~~~~gt~a~~~~l~~~~~~~g~ 79 (359)
|.+|.|.......+ +++.+++.+...... |. .++...++|+.+ ++++| .+..++++||++|+..++.++..++||
T Consensus 2 ~~~i~~~~p~~~~~-~~i~~a~~~~~~~~~-~~~~~~~~~~l~~~~~a~~~g~~~~~v~~~sgt~al~~al~~l~~~~Gd 79 (377)
T 3ju7_A 2 MENIPFLRASTVPV-IEYLDELKEIDASHI-YTNYGPINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGK 79 (377)
T ss_dssp -CCBCSCCCCCCCG-GGGHHHHHHHHHHTC-CSSSCHHHHHHHHHHHHHTSTTCSEEEEESCHHHHHHHHHHHHSCTTCC
T ss_pred CceeeccCCCCCCc-HHHHHHHHHHHHcCC-cccCCHHHHHHHHHHHHHHhCCCCeEEEeCCHHHHHHHHHHHcCCCCcC
Confidence 45677776555443 444444444332222 43 478899999999 99999 778899999999999999998336999
Q ss_pred eEEecCCCcceeeccccccccCCccceeeecC-CCCCCCHHHHHHHhcCCCCCccCCc--eeEEEEeccccCCCceecCh
Q 018243 80 EVILGDNSHIHIYENGGISTIGGVHPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPT--TRLICLENTHANCGGRCLSV 156 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~--~~~v~i~~~~~~ptG~~~~~ 156 (359)
+|+++.++|.++.. .+...|++++.++.+ .++.+|++++++.+.+ ++ +++|+. +||+|...+
T Consensus 80 ~Vi~~~~~~~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-------~~~~tk~v~~----~~~~G~~~~- 144 (377)
T 3ju7_A 80 YALMPSFTFPATPL---AAIWCGLEPYFIDISIDDWYMDKTVLWDKIEE-------LKEEVAIVVP----YATFGSWMN- 144 (377)
T ss_dssp EEEEESSSCTHHHH---HHHHTTCEEEEECBCTTTCSBCHHHHHHHHHH-------HGGGEEEECC----BCGGGBCCC-
T ss_pred EEEECCCCcHHHHH---HHHHcCCEEEEEecCCccCCcCHHHHHHHHhc-------CCCCceEEEE----ECCCCCccC-
Confidence 99999999988664 366789999999876 5688999999999831 45 888874 237888776
Q ss_pred hhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEec-CHHHHHHHHHHHHhh-
Q 018243 157 EYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVG-SKEFIKKARRLRKTL- 234 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~-~~~~~~~~~~~~~~~- 234 (359)
+++|.++|+ +|+++|+|++|++|... .+........+.++++++.+|+++++.||+++. ++++.++++.++...
T Consensus 145 --~~~i~~la~-~~~~vi~D~a~a~g~~~-~~~~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~~l~~~~~~~~~~g~ 220 (377)
T 3ju7_A 145 --LEEYEELEK-KGVPVVVDAAPGFGLMN-GGMHYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNEEDIQRIKRMGNFGF 220 (377)
T ss_dssp --CHHHHHHHH-TTCCBEEECTTCTTCEE-TTEETTTTCSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHTBTTB
T ss_pred --HHHHHHHHh-cCCEEEEECCCccCCeE-CCEeccCCCCcEEEEECCCCCcCCCCCcEEEEECCHHHHHHHHHHHhcCC
Confidence 789999999 99999999999877542 222221111133344456789998766676655 788888887766532
Q ss_pred ---------CCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCce--EecCCc-cce--EEEEEeccch
Q 018243 235 ---------GGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLR--VDVDAV-ETN--IVYFEITEDS 300 (359)
Q Consensus 235 ---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~--~~~~~~-~~~--~~~~~~~~~~ 300 (359)
+.+..++++.++.+..+++.... +.++..++++++.+.|++++++. +..... ... ++.+.++.
T Consensus 221 ~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l~~-~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 297 (377)
T 3ju7_A 221 DTNRECTMMGFNCKMSEYAAAIGIATMKKWDD-KLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPE-- 297 (377)
T ss_dssp CTTSCBCSSCCBCCCCHHHHHHHHHHHHTHHH-HHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCT--
T ss_pred CCCCceeeccccCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCC--
Confidence 34555677777777777766544 77888899999999999886542 211111 112 23444443
Q ss_pred HHHHHHHHHHHHhcCceeccCC-------------------------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 301 KLYAACLLKKLEEHGVLVMPES-------------------------STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 301 ~~~~~~~~~~l~~~gi~~~~~~-------------------------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
..+.+++.+.|.++||.+.... ...||+++++.++++|++++++.|++++...
T Consensus 298 ~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~~ 375 (377)
T 3ju7_A 298 EVRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVSA 375 (377)
T ss_dssp TSCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC-----
T ss_pred hhhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 1247899999999999873321 1259999999999999999999998887654
No 107
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=100.00 E-value=1.1e-32 Score=244.00 Aligned_cols=323 Identities=19% Similarity=0.165 Sum_probs=232.1
Q ss_pred CccccccccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCe
Q 018243 1 MVTRTVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSE 80 (359)
Q Consensus 1 ~~~~~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~ 80 (359)
|...++|+..+.+. ..+++.+++.+..... .|..++...++|+.++++++.+..++++||++|+..++.++..++||+
T Consensus 1 m~~~~~~l~~~~~~-~~~~~~~a~~~~~~~~-~~~~~~~~~~l~~~la~~~~~~~~i~~~sgt~al~~~l~~l~~~~gd~ 78 (373)
T 3frk_A 1 MKISFASFKPMHDE-IEYEIKFKFEEIYKRN-WFILGDEDKKFEQEFADYCNVNYCIGCGNGLDALHLILKGYDIGFGDE 78 (373)
T ss_dssp CCBCSCCCHHHHHH-HHHHHHHHHHHHHHHT-CCSSSHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHTTCCTTCE
T ss_pred CCCcccCCCcccCC-CCHHHHHHHHHHHHCC-CccCCchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCE
Confidence 34455555543222 2366777776543222 366778999999999999999988999999999999999983369999
Q ss_pred EEecCCCcceeeccccccccCCccceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhH
Q 018243 81 VILGDNSHIHIYENGGISTIGGVHPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYT 159 (359)
Q Consensus 81 vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l 159 (359)
|+++.++|.+... .+...|++++.++.+ +++.+|++++++.++ +++++|++ +||||...+ +
T Consensus 79 Vi~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~--------~~~~~v~~----~n~~G~~~~---l 140 (373)
T 3frk_A 79 VIVPSNTFIATAL---AVSYTGAKPIFVEPDIRTYNIDPSLIESAIT--------EKTKAIIA----VHLYGQPAD---M 140 (373)
T ss_dssp EEEETTSCTHHHH---HHHHHSCEEEEECEETTTTEECGGGTGGGCC--------TTEEEEEE----ECCTTCCCC---H
T ss_pred EEECCCCcHHHHH---HHHHcCCEEEEEeccccccCcCHHHHHHhcC--------CCCeEEEE----ECCCcCccc---H
Confidence 9999999998765 266778899999776 568889999999998 67888873 348999766 8
Q ss_pred HHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEecc--ccCCC-ceeeEEec-CHHHHHHHHHHHHhh-
Q 018243 160 DSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLS--KGLGA-PVGSVIVG-SKEFIKKARRLRKTL- 234 (359)
Q Consensus 160 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~--K~~g~-~~gg~~~~-~~~~~~~~~~~~~~~- 234 (359)
++|.++|+++|+++|+|++|+.|.. ..+.. +....|++++|++ |++++ +.||+++. ++++.+.++......
T Consensus 141 ~~i~~l~~~~~~~li~D~a~~~g~~-~~~~~---~~~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~g~ 216 (373)
T 3frk_A 141 DEIKRIAKKYNLKLIEDAAQAHGSL-YKGMK---VGSLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNYGS 216 (373)
T ss_dssp HHHHHHHHHHTCEEEEECTTCTTCE-ETTEE---TTSSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBTTC
T ss_pred HHHHHHHHHcCCEEEEECCcccCCE-ECCEe---ccccccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhcCc
Confidence 9999999999999999999877654 22222 2223688888855 99987 55677776 466777776655422
Q ss_pred ---------CCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCcc--ceEEEEEeccchHHH
Q 018243 235 ---------GGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVE--TNIVYFEITEDSKLY 303 (359)
Q Consensus 235 ---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~ 303 (359)
+.++...+..+++....++... +..++..++.+++.+.|++++ +.+...+.. ..+..+.+... +
T Consensus 217 ~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~---~ 291 (373)
T 3frk_A 217 EKKYHHIYKGFNSRLDELQAGFLRVKLKYLD-KWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRSE---K 291 (373)
T ss_dssp SBTTBCCSCCCBCCCCHHHHHHHHHHHHTHH-HHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEES---S
T ss_pred ccCCccccccccCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEeC---C
Confidence 2233345555555555554443 377788888999999999884 654222211 22222333321 5
Q ss_pred HHHHHHHHHhcCceeccCCC---------------------------cEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 304 AACLLKKLEEHGVLVMPESS---------------------------TRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 304 ~~~~~~~l~~~gi~~~~~~~---------------------------~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.+++.+.|.++||.+.+... ..+|+++++.++++|+++++++|+++..+
T Consensus 292 ~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~ 367 (373)
T 3frk_A 292 RDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLE 367 (373)
T ss_dssp HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred HHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence 77899999999998864321 57999999999999999999999876654
No 108
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=7.3e-32 Score=243.35 Aligned_cols=323 Identities=18% Similarity=0.173 Sum_probs=223.1
Q ss_pred ccccccCCCCCChH-HHHHHHHHcCCC------CCCccCCChHHHHHHHHHHHHh----CCC-CeEEcCCchHHHHHHHH
Q 018243 4 RTVDLRSDTVTKPT-EAMRAAMASAEV------DDDVLMHDPTAFRLETEMAKVM----GKE-AGLFVPSGTMGNLISVL 71 (359)
Q Consensus 4 ~~id~~~~~~~~~~-~~~~~a~~~~~~------~~~~~~~~~~~~~l~~~la~~~----~~~-~~~~~~~gt~a~~~~l~ 71 (359)
.+|||.++.+..+. |.+.+++.+... +...|+..++..++++.+++++ +.+ ..+++++|+.+++.++.
T Consensus 57 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~l~ 136 (432)
T 3ei9_A 57 QVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRLQ 136 (432)
T ss_dssp CCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHHH
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHHHH
Confidence 57999998776544 788887766432 2234555667799999999997 443 34555555554455566
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCC------------ccceeeecCCC--CCCCHHHHHHHhcCCCCCccCCce
Q 018243 72 VHCETRGSEVILGDNSHIHIYENGGISTIGG------------VHPRTVKNNQD--GTMDIDLIEAAIRDPKGEIVYPTT 137 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~--~~~~~~~l~~~l~~~~~~~~~~~~ 137 (359)
.++ ++||.|++++|+|.+... + +...| .+++.++.+.. ...+++. . +++
T Consensus 137 ~l~-~~gd~Vl~~~p~y~~~~~-~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~--------~~~ 199 (432)
T 3ei9_A 137 VMF-GSNVTIAVQDPSYPAYVD-S--SVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----V--------GRT 199 (432)
T ss_dssp HHH-CTTCCEEEEESCCTHHHH-H--HHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----C--------CCC
T ss_pred HHc-CCCCEEEEeCCCCHHHHH-H--HHHcCCcccccccccccCceEEeccCcccCCcCChhh-----C--------CCC
Confidence 666 599999999999988654 2 33334 35666765533 2233221 1 578
Q ss_pred eEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh--cCccEEEEeccccCCCce-e
Q 018243 138 RLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV--QAADSASVCLSKGLGAPV-G 214 (359)
Q Consensus 138 ~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d~~~~s~~K~~g~~~-g 214 (359)
++|++++ ++||||.+++.+++++|+++|++||+++|+||+|..+.......+...+. .+.++++.|+||+||.++ .
T Consensus 200 ~~v~l~~-p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r 278 (432)
T 3ei9_A 200 DIIFFCS-PNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVR 278 (432)
T ss_dssp SEEEEES-SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTC
T ss_pred CEEEEeC-CCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccc
Confidence 8999865 56799999999999999999999999999999987544332222333332 133466779999998543 2
Q ss_pred -eEEecCHHH--------HHHHHHHHHhhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCce
Q 018243 215 -SVIVGSKEF--------IKKARRLRKTLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLR 281 (359)
Q Consensus 215 -g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 281 (359)
|++++++++ .+.+.........+. +...+.++..++. .+.++.++++.++++++.+.|+++ |++
T Consensus 279 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 355 (432)
T 3ei9_A 279 LGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGA--SNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYD 355 (432)
T ss_dssp CEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCS--CHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred eEEEEEChHHhhcchHHHHHHHHHHhccccCCC--CHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-Cce
Confidence 888887776 666665544433333 3333444444432 334557777889999999999998 888
Q ss_pred EecCCccceEEEEEeccchHHHHHHHHHHH-HhcCceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 282 VDVDAVETNIVYFEITEDSKLYAACLLKKL-EEHGVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+.. +..++++|+.++. .+..++.+.| +++||.+.|+ +..++|+++ ..+++++++++++|++--+..
T Consensus 356 ~~~-~~~~~~~~~~~~~---~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~--~~~~e~l~~~l~rl~~~~~~~ 428 (432)
T 3ei9_A 356 VYG-GKNAPYVWVHFPN---QSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSA--FGHRENILEACRRFKQLYKHH 428 (432)
T ss_dssp EEE-CSSSSEEEEECTT---SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEEC--CSCHHHHHHHHHHHHHHHTTS
T ss_pred ecC-CCcceEEEEECCC---CCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEe--cCCHHHHHHHHHHHHHHhhhc
Confidence 753 3478899999874 3666777877 5679999764 367899998 579999999999998765543
No 109
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=5.2e-31 Score=234.29 Aligned_cols=325 Identities=14% Similarity=0.119 Sum_probs=228.0
Q ss_pred ccccccccCCCCCChHHHHHHHHHcCCCCCCccCC--ChHHHHHHHHHHHHhCCC------CeEEcCCchHHHHHHHHHh
Q 018243 2 VTRTVDLRSDTVTKPTEAMRAAMASAEVDDDVLMH--DPTAFRLETEMAKVMGKE------AGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 2 ~~~~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~~------~~~~~~~gt~a~~~~l~~~ 73 (359)
.|+.+.|..+ +..++|++.+++.+..... +.+ .....++++.++++++.. ..++++||++++..++..+
T Consensus 3 ~~~~~~~~p~-p~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~ 79 (385)
T 2bkw_A 3 KSVDTLLIPG-PIILSGAVQKALDVPSLGH--TSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNF 79 (385)
T ss_dssp CCCCEECSSS-SCCCCHHHHHTTSCCCCCT--TSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHH
T ss_pred CccceeecCC-CcCchHHHHHHHhcccccc--CCHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHH
Confidence 3556666665 4455689999998754332 211 124577889999998874 3477888999999999988
Q ss_pred hh--hcCCeEEecCC-CcceeeccccccccCCccceeeec-CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC
Q 018243 74 CE--TRGSEVILGDN-SHIHIYENGGISTIGGVHPRTVKN-NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC 149 (359)
Q Consensus 74 ~~--~~g~~vl~~~~-~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p 149 (359)
.. ++|++|+++++ .|..... ..+...|++++.++. +.++.+|+++|++.+++ .++++|++++ ++||
T Consensus 80 ~~~~~~gd~vlv~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-------~~~~~v~~~~-~~np 149 (385)
T 2bkw_A 80 ILSKAPNKNVLVVSTGTFSDRFA--DCLRSYGAQVDVVRPLKIGESVPLELITEKLSQ-------NSYGAVTVTH-VDTS 149 (385)
T ss_dssp SCTTCSCCEEEEECSSHHHHHHH--HHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHH-------SCCSEEEEES-EETT
T ss_pred hccCCCCCeEEEEcCCcchHHHH--HHHHHcCCceEEEecCCCCCCCCHHHHHHHHhc-------CCCCEEEEEc-cCCC
Confidence 62 48999987744 4333322 235677889999988 77888999999999982 2788998855 5569
Q ss_pred CceecChhhHHHHHHHHHHc--CcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHH-
Q 018243 150 GGRCLSVEYTDSVGEIAKKH--GLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIK- 225 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~--~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~- 225 (359)
||.+.+ +++|.++|++| |+++|+|++|+++... .....+ +.|+++.|+||+++++.| |+++.+++.++
T Consensus 150 tG~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~~~~---~~~~~~--~~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~ 221 (385)
T 2bkw_A 150 TAVLSD---LKAISQAIKQTSPETFFVVDAVCSIGCEE---FEFDEW--GVDFALTASQKAIGAPAGLSISLCSSRFMDY 221 (385)
T ss_dssp TTEECC---HHHHHHHHHHHCTTSEEEEECTTTTTTSC---CCTTTT--TCSEEEEESSSTTCCCSCEEEEEECHHHHHH
T ss_pred cCeEcC---HHHHHHHHHhhCCCCEEEEECccccCCcc---cccccc--CceEEEecCccccccCCcceEEEEcHHHHHH
Confidence 999988 78999999999 9999999998765432 122222 578999999998876666 88888888766
Q ss_pred HHH------------------HH-HHhh-C--CC-cchhHHHHHHHHHHHHH----hHHHHhhhHHHHHHHHHHHH-hcC
Q 018243 226 KAR------------------RL-RKTL-G--GG-MRQVGVLCAAALVALQE----NVLVMLDGDHKKAKLLAEGL-NQL 277 (359)
Q Consensus 226 ~~~------------------~~-~~~~-~--~~-~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~l~~~l-~~~ 277 (359)
.++ .. .... + .. ...+.....++..+++. ..+...+++.++++++.+.| +++
T Consensus 222 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 301 (385)
T 2bkw_A 222 ALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGL 301 (385)
T ss_dssp HTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhc
Confidence 431 11 1111 1 00 11122222333333322 24446777889999999999 888
Q ss_pred CCceEecCC----ccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC-----CcEEEEE-eC---CCCCHHHHHHHHH
Q 018243 278 KGLRVDVDA----VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES-----STRVRIV-VH---HQISANDVHYTLS 344 (359)
Q Consensus 278 ~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-----~~~lRi~-~~---~~~~~~~i~~~~~ 344 (359)
++++..+. ..++++++.++. ..++.+.|.++||.+.++. ..++|++ +. ..+++++++++++
T Consensus 302 -g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~ 375 (385)
T 2bkw_A 302 -QLTSVSRYPSNMSAHGLTAVYVAD-----PPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFD 375 (385)
T ss_dssp -CCEESSCSSSTTBCSSCEEEECSC-----HHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHH
T ss_pred -CceecccCcccccCCceEEEecCC-----HHHHHHHHHHCCeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHH
Confidence 88875322 246788888753 5678899988999997753 4689999 54 2479999999999
Q ss_pred HHHHHHHHH
Q 018243 345 CFQKIYAGV 353 (359)
Q Consensus 345 ~l~~~~~~~ 353 (359)
+|+++++++
T Consensus 376 ~l~~~~~~~ 384 (385)
T 2bkw_A 376 LIKLALQRK 384 (385)
T ss_dssp HHHHHTTC-
T ss_pred HHHHHHHhc
Confidence 999987654
No 110
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=100.00 E-value=6.1e-31 Score=236.75 Aligned_cols=328 Identities=15% Similarity=0.129 Sum_probs=226.2
Q ss_pred ccccccCC---CCCC-hHHHHHHHHHcCCCCCCcc---CCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh-
Q 018243 4 RTVDLRSD---TVTK-PTEAMRAAMASAEVDDDVL---MHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE- 75 (359)
Q Consensus 4 ~~id~~~~---~~~~-~~~~~~~a~~~~~~~~~~~---~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~- 75 (359)
.+|||.++ +..+ ++|.+.+++.+.......+ ...+...++++.++++++.+..++++||++|+..++..+..
T Consensus 66 ~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~a~~~ 145 (433)
T 1z7d_A 66 RYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAFFSVPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCRKW 145 (433)
T ss_dssp EEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEEHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEcccchhhcccCCCCHHHHHHHHHHHHhCCCccCCcCCHHHHHHHHHHHhhcCCCeEEEeCCHHHHHHHHHHHHHHH
Confidence 57899884 2223 6688988887754332211 13566789999999999988889999999999999998652
Q ss_pred -------hcC-CeEEecCCCcceeeccccccccCC------------ccceeeecCCCCCCCHHHHHHHhcCCCCCccCC
Q 018243 76 -------TRG-SEVILGDNSHIHIYENGGISTIGG------------VHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYP 135 (359)
Q Consensus 76 -------~~g-~~vl~~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~ 135 (359)
.+| ++|++.+++|..... ......+ ..+..++.+ |+++|++.++. +
T Consensus 146 ~~~~~g~~~gr~~vi~~~~~yhg~~~--~~~~~~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~-------~ 211 (433)
T 1z7d_A 146 GYEVKKIPENMAKIVVCKNNFSGRTL--GCISASTTKKCTSNFGPFAPQFSKVPYD-----DLEALEEELKD-------P 211 (433)
T ss_dssp HHHTSCCCTTCCEEEEETTC----------------------------CEEEECTT-----CHHHHHHHHTS-------T
T ss_pred hhhccCCCCCCCeEEEEeCCcCCcch--hhhcccCCccccccCCCCCCCeEEeCCC-----CHHHHHHHhCC-------C
Confidence 256 889999987755433 1133333 234444443 89999999952 6
Q ss_pred ceeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEeccccCCCc
Q 018243 136 TTRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSKGLGAP 212 (359)
Q Consensus 136 ~~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~g~~ 212 (359)
++++|++++. ++++|.. ++.+++++|+++|++||+++|+||+|. + +...+.. .......+|++ |++|+++++
T Consensus 212 ~~~~vi~ep~-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g-~g~~g~~~~~~~~~~~~di~--t~sK~l~~G 286 (433)
T 1z7d_A 212 NVCAFIVEPI-QGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT-G-LGRTGKLLCVHHYNVKPDVI--LLGKALSGG 286 (433)
T ss_dssp TEEEEEECSS-BSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-T-TTTTSSSSGGGGGTCCCSEE--EECGGGGTT
T ss_pred CEEEEEEECC-CCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCcc-C-CCcCCcchhhHhcCCCCCEE--EECccccCC
Confidence 7889888665 4468975 678899999999999999999999985 2 2222321 11222246765 778999754
Q ss_pred --eeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC----CCceEecC
Q 018243 213 --VGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL----KGLRVDVD 285 (359)
Q Consensus 213 --~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~----~g~~~~~~ 285 (359)
..|++++++++++.+... ..+.++..+++.++++..+++...+ +..++..++.+++.+.|+++ |.+...
T Consensus 287 ~~~~G~v~~~~~~~~~l~~~--~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~-- 362 (433)
T 1z7d_A 287 HYPISAVLANDDIMLVIKPG--EHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDV-- 362 (433)
T ss_dssp SSCCEEEEECHHHHTTCCTT--CCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE--
T ss_pred CCCeEEEEECHHHHhhhccc--cccccCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE--
Confidence 247888898887765321 2344455566777777777764432 35566777888888888764 322222
Q ss_pred CccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 286 AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
+..+.++++.++.. ..+..++.+.|.++||.+.+++..++|++++..++++++++++++|+++++++.+
T Consensus 363 ~~~g~~~~i~~~~~-~~~~~~~~~~l~~~Gv~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 431 (433)
T 1z7d_A 363 RGKGLLCAIEFKNE-LVNVLDICLKLKENGLITRDVHDKTIRLTPPLCITKEQLDECTEIIVKTVKFFDE 431 (433)
T ss_dssp EEETTEEEEEECTT-TCCHHHHHHHHHHTTEECCEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHHHC-
T ss_pred EeeeeEEEEEEccC-hhHHHHHHHHHHHCCeEEecCCCCEEEEECCcCCCHHHHHHHHHHHHHHHHHHHh
Confidence 34678888888752 1246789999988999999877889999998889999999999999999887643
No 111
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=100.00 E-value=5.1e-31 Score=237.57 Aligned_cols=328 Identities=15% Similarity=0.116 Sum_probs=233.1
Q ss_pred cccccccCCCC---CC-hHHHHHHHHHcCCCCCCcc---CCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018243 3 TRTVDLRSDTV---TK-PTEAMRAAMASAEVDDDVL---MHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~~~---~~-~~~~~~~a~~~~~~~~~~~---~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
..+|||.++.. .+ ++|++.+++.+.......+ ...+...++++.+++++|.+..++++||++|+..++..++.
T Consensus 76 ~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~~~~ 155 (439)
T 2oat_A 76 RKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARK 155 (439)
T ss_dssp CEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEESSHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHH
T ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHHhcCCCEEEEeCCHHHHHHHHHHHHHH
Confidence 35789988532 22 6689999988754432211 13456789999999999988789999999999999998762
Q ss_pred --------hcC-CeEEecCCCcceeeccccccccCC------------ccceeeecCCCCCCCHHHHHHHhcCCCCCccC
Q 018243 76 --------TRG-SEVILGDNSHIHIYENGGISTIGG------------VHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVY 134 (359)
Q Consensus 76 --------~~g-~~vl~~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~ 134 (359)
.+| ++|++.+++|..... ......| ..++.++.+ |+++|++.+++
T Consensus 156 ~~~~~~g~~~g~~~vi~~~~~yhg~~~--~~~~~~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~------- 221 (439)
T 2oat_A 156 WGYTVKGIQKYKAKIVFAAGNFWGRTL--SAISSSTDPTSYDGFGPFMPGFDIIPYN-----DLPALERALQD------- 221 (439)
T ss_dssp HHHHTTCCCTTCCEEEEETTCCCCSSH--HHHTTCCCHHHHTTSCSCCTTEEEECSS-----CHHHHHHHTTS-------
T ss_pred HhhhccCCCCCCCeEEEEcCCCCCCCH--hHhhcCCChhcccCCCCCCCCeEEeCCC-----CHHHHHHHhCC-------
Confidence 145 789988887655443 1133333 344455543 89999999952
Q ss_pred CceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEeccccCCC
Q 018243 135 PTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSKGLGA 211 (359)
Q Consensus 135 ~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~g~ 211 (359)
+++++|++++. ++++|. .++.+++++|.++|++||+++|+||+|. | +...+.. .......+|++ |++|.+++
T Consensus 222 ~~~~~vi~ep~-~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-g-~g~~g~~~~~~~~~~~~Di~--t~sK~l~~ 296 (439)
T 2oat_A 222 PNVAAFMVEPI-QGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQT-G-LARTGRWLAVDYENVRPDIV--LLGKALSG 296 (439)
T ss_dssp TTEEEEEECSS-BTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-T-TTTTSSSSGGGGGTCCCSEE--EECGGGGT
T ss_pred CCEEEEEEECC-CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-CccCCcchhHHHhCCCCcEE--EecccccC
Confidence 57888888655 447896 5688999999999999999999999984 2 2222321 12222246765 77899976
Q ss_pred c--eeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcCCCceEe-cCCc
Q 018243 212 P--VGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQLKGLRVD-VDAV 287 (359)
Q Consensus 212 ~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~ 287 (359)
+ .+|++++++++++.+... ..+.++..+++.++++..+++...+ ...++..++.+++++.|+++ ++.+. ..+.
T Consensus 297 G~~~~G~v~~~~~~~~~l~~~--~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~ 373 (439)
T 2oat_A 297 GLYPVSAVLCDDDIMLTIKPG--EHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKL-PSDVVTAVRG 373 (439)
T ss_dssp TSSCCEEEEECHHHHTTSCTT--SSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTS-CTTTEEEEEE
T ss_pred CCCCeEEEEECHHHHhccCCC--CcccCCCcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh-cCCCcEEEEe
Confidence 4 247888888887765321 2344555566777777777765433 35667888899999999887 44321 1134
Q ss_pred cceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 288 ETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.+.++++.++...+.+..++.+.|.++||.+.+.+..++|++++..++++++++++++|++++++
T Consensus 374 ~g~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 374 KGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp ETTEEEEEECCCSSCCHHHHHHHHHHTTEECCBSSSSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred eeeEEEEEEecCccHHHHHHHHHHHHCCeEEecCCCCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 67888888865210246789999988999999987889999998889999999999999998764
No 112
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=100.00 E-value=5.8e-32 Score=241.38 Aligned_cols=322 Identities=15% Similarity=0.155 Sum_probs=226.9
Q ss_pred ccccccCC---CCCC-hHHHHHHHHHcCCCCCCc---cCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhh
Q 018243 4 RTVDLRSD---TVTK-PTEAMRAAMASAEVDDDV---LMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCET 76 (359)
Q Consensus 4 ~~id~~~~---~~~~-~~~~~~~a~~~~~~~~~~---~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~ 76 (359)
.++||.++ ++.+ ++|++.+++.+....... ....+...++++.+++++|.+..++++||++|+..++..+...
T Consensus 41 ~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~gg~~a~~~al~~~~~~ 120 (397)
T 2ord_A 41 AYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIHCSNLFWNRPQMELAELLSKNTFGGKVFFANTGTEANEAAIKIARKY 120 (397)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCTTSEEHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEECCccccccccCCCCHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHH
Confidence 46899876 4443 457888887764322111 1134678999999999999877889999999999999887631
Q ss_pred -----c-CCeEEecCCCcceeeccccccccCCcc------------ceeeecCCCCCCCHHHHHHHhcCCCCCccCCcee
Q 018243 77 -----R-GSEVILGDNSHIHIYENGGISTIGGVH------------PRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTR 138 (359)
Q Consensus 77 -----~-g~~vl~~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 138 (359)
+ +++|++.+++|.+... ......|.+ ++.++.+ |+++|++.++ ++++
T Consensus 121 ~~~~~~~~~~vi~~~~~yh~~~~--~~~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~l~--------~~~~ 185 (397)
T 2ord_A 121 GKKKSEKKYRILSAHNSFHGRTL--GSLTATGQPKYQKPFEPLVPGFEYFEFN-----NVEDLRRKMS--------EDVC 185 (397)
T ss_dssp HHHHCTTCCEEEEEBTCCCCSSH--HHHHHSBCHHHHGGGCSCCTTEEEECTT-----CHHHHHHHCC--------TTEE
T ss_pred hhcCCCCCceEEEEcCCcCCCch--hhhhccCChhhccccCCCCCCeeEecCC-----CHHHHHHHhh--------cCeE
Confidence 4 4678888887655443 124444544 4445543 8999999998 6899
Q ss_pred EEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc--hhHhhhcCccEEEEeccccCCCcee-
Q 018243 139 LICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV--PVRRLVQAADSASVCLSKGLGAPVG- 214 (359)
Q Consensus 139 ~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~~d~~~~s~~K~~g~~~g- 214 (359)
+|++++ ++||||. +++.+++++|.++|++||+++|+||+|. + +...+. ....+...+|++ |+||+++++.+
T Consensus 186 ~v~~~~-~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~-~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~r~ 260 (397)
T 2ord_A 186 AVFLEP-IQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC-G-MGRTGKLFAYQKYGVVPDVL--TTAKGLGGGVPI 260 (397)
T ss_dssp EEEECS-EECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTT-T-TTTTSSSSHHHHHTCCCSEE--EECGGGGTTSCC
T ss_pred EEEEec-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-C-CccCccchhhhhhCCCCCee--eeccccCCCcCe
Confidence 999966 6679999 8999999999999999999999999985 2 222222 222332246765 66899985433
Q ss_pred eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhcC----CCceEecCCccc
Q 018243 215 SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQL----KGLRVDVDAVET 289 (359)
Q Consensus 215 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~~----~g~~~~~~~~~~ 289 (359)
|+++.++++. .++.. ..+.++..++..++++..+++... ++..++..++++++.+.|+++ +.+... +..+
T Consensus 261 G~~~~~~~~~-~l~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~~~g 335 (397)
T 2ord_A 261 GAVIVNERAN-VLEPG--DHGTTFGGNPLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEMKEEYDVVADV--RGMG 335 (397)
T ss_dssp EEEEECSTTC-CCCTT--SSCCSSTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE--EEET
T ss_pred EEEEEchHhc-ccCCC--CcCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCceEEE--EEEe
Confidence 6677776665 43211 223344445666666666665432 235667778888888888764 222211 2367
Q ss_pred eEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 290 NIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
+++++.++.. .+..++.+.|.++||.+.+++..++|++++...+++++++++++|++++++
T Consensus 336 ~~~~~~~~~~--~~~~~l~~~l~~~gi~v~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 336 LMIGIQFREE--VSNREVATKCFENKLLVVPAGNNTIRFLPPLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp TEEEEEECTT--SCHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEECCh--HHHHHHHHHHHHCCCEEccCCCCEEEEECCcCCCHHHHHHHHHHHHHHHhh
Confidence 8888888652 257789999988999999988889999988789999999999999988764
No 113
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=100.00 E-value=6.9e-32 Score=240.38 Aligned_cols=319 Identities=19% Similarity=0.201 Sum_probs=228.9
Q ss_pred ccccCCCCCChHHHHHHHHHcCCCCCCccC-CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEec
Q 018243 6 VDLRSDTVTKPTEAMRAAMASAEVDDDVLM-HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILG 84 (359)
Q Consensus 6 id~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~ 84 (359)
++|....+..+ +++.+++.+..... .|. .++...++++.++++++.+..++++||++|+..++..+..++|++|+++
T Consensus 25 ~~l~~~~p~~~-~~~~~a~~~~~~~~-~~~~~~~~~~~l~~~la~~~~~~~~i~~~~gt~al~~~l~~~~~~~gd~vl~~ 102 (391)
T 3dr4_A 25 PRISVAAPRLD-GNERDYVLECMDTT-WISSVGRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVP 102 (391)
T ss_dssp ---CCCCCCCC-SSHHHHHHHHHHHT-CCSSCSHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHTCCTTCEEEEE
T ss_pred ceeccCCCCCC-HHHHHHHHHHHHcC-CccCCChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEEC
Confidence 44444444333 55555555533222 344 6789999999999999999889999999999999999833699999999
Q ss_pred CCCcceeeccccccccCCccceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHH
Q 018243 85 DNSHIHIYENGGISTIGGVHPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVG 163 (359)
Q Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~ 163 (359)
.++|.+... .+...|.+++.++.+ +++.+|+++|++.++ +++++|++ +||||...+ +++|.
T Consensus 103 ~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~--------~~~~~v~~----~n~tG~~~~---~~~i~ 164 (391)
T 3dr4_A 103 SLTYIASAN---SVTYCGATPVLVDNDPRTFNLDAAKLEALIT--------PRTKAIMP----VHLYGQICD---MDPIL 164 (391)
T ss_dssp SSSCTHHHH---HHHHTTCEEEEECBCTTTCSBCGGGSGGGCC--------TTEEEECC----BCGGGCCCC---HHHHH
T ss_pred CCchHHHHH---HHHHCCCEEEEEecCccccCcCHHHHHHhcC--------CCceEEEE----ECCCCChhh---HHHHH
Confidence 999988764 367789999999877 568899999999988 67888874 348999766 89999
Q ss_pred HHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEe--ccccCCCceeeEEec-CHHHHHHHHHHHHhh------
Q 018243 164 EIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVC--LSKGLGAPVGSVIVG-SKEFIKKARRLRKTL------ 234 (359)
Q Consensus 164 ~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s--~~K~~g~~~gg~~~~-~~~~~~~~~~~~~~~------ 234 (359)
++|+++|+++|+|++|+.|... .+..... ..|+.++| .+|+++++.||+++. ++++.+.++......
T Consensus 165 ~l~~~~~~~li~D~a~~~g~~~-~~~~~~~---~~di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~ 240 (391)
T 3dr4_A 165 EVARRHNLLVIEDAAEAVGATY-RGKKSGS---LGDCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQGMDPNRR 240 (391)
T ss_dssp HHHHHTTCEEEEECTTCTTCEE-TTEETTS---SSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHHBTTCCTTST
T ss_pred HHHHHcCCEEEEECcccccceE-CCeeecc---cCCEEEEECCCCCcCCcCCeEEEEECCHHHHHHHHHHHhcCCCCCCc
Confidence 9999999999999998765543 2222111 23555555 669998666676665 566777776554321
Q ss_pred ------CCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecC--Cc----cceEEEEEeccchHH
Q 018243 235 ------GGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVD--AV----ETNIVYFEITEDSKL 302 (359)
Q Consensus 235 ------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~--~~----~~~~~~~~~~~~~~~ 302 (359)
+.++......+++....++.. ++..++..++++++.+.|+++ ++.+... +. ....+++.++...+.
T Consensus 241 ~~~~~~g~~~~~~~l~aa~~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 318 (391)
T 3dr4_A 241 YWFPIVGFNYRMTNIQAAIGLAQLERV-DEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRHVFWMYTVRLGEGLST 318 (391)
T ss_dssp TCCSSCCCBCBCCHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCCCSSEEEEECSSCSS
T ss_pred ccccccccccCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCcceeEEEEEEECCccch
Confidence 112344555555555555443 337778888899999999998 8876433 11 122356666541134
Q ss_pred HHHHHHHHHHhcCceeccCC------------------------CcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 303 YAACLLKKLEEHGVLVMPES------------------------STRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~~~~~------------------------~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
+.+++.+.|.++||.+.++. ...+|++++..++++|+++++++|++++
T Consensus 319 ~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 319 TRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp CHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 68899999999999986653 3469999999999999999999998764
No 114
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=6.7e-32 Score=244.81 Aligned_cols=324 Identities=16% Similarity=0.134 Sum_probs=223.6
Q ss_pred ccccccCCCCCCh-HHHHHHHHHcCCC------CCCccCCChHHHHHHHHHHHHh----CCC-Ce-EEcCCchHHHHHHH
Q 018243 4 RTVDLRSDTVTKP-TEAMRAAMASAEV------DDDVLMHDPTAFRLETEMAKVM----GKE-AG-LFVPSGTMGNLISV 70 (359)
Q Consensus 4 ~~id~~~~~~~~~-~~~~~~a~~~~~~------~~~~~~~~~~~~~l~~~la~~~----~~~-~~-~~~~~gt~a~~~~l 70 (359)
.+|||.++....+ +|.+.+++.+... ....|+..++..++++.+++++ +.+ .. ++++|+++++..+
T Consensus 70 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~~~- 148 (449)
T 3qgu_A 70 KIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIARI- 148 (449)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHH-
T ss_pred CEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHHHH-
Confidence 5799999876654 3778777766433 2234666677899999999998 433 23 4555555555555
Q ss_pred HHhhhhcCCeEEecCCCcceeeccccccccCCcc----------ceeeecCCCC--CCCHHHHHHHhcCCCCCccCCcee
Q 018243 71 LVHCETRGSEVILGDNSHIHIYENGGISTIGGVH----------PRTVKNNQDG--TMDIDLIEAAIRDPKGEIVYPTTR 138 (359)
Q Consensus 71 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~~--~~~~~~l~~~l~~~~~~~~~~~~~ 138 (359)
..++ ++||+|++++|+|.+... .+...|.+ ++.++.+.++ ..++++ . ++++
T Consensus 149 ~~l~-~~gd~Vl~~~p~~~~~~~---~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-------~~~~ 211 (449)
T 3qgu_A 149 QMMF-GSKPTVAVQDPSYPVYVD---TSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSK------A-------KRTD 211 (449)
T ss_dssp HHHH-CSSSCEEEEESCCTHHHH---HHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGG------C-------CCCS
T ss_pred HHHh-CCCCEEEEcCCCChhHHH---HHHHcCCcccccccccceeEEEecccccCCcCChhH------c-------CCCC
Confidence 6666 599999999999887654 36666767 7777765432 223221 0 4688
Q ss_pred EEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhh--cCccEEEEeccccCCCce-e
Q 018243 139 LICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLV--QAADSASVCLSKGLGAPV-G 214 (359)
Q Consensus 139 ~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~--~~~d~~~~s~~K~~g~~~-g 214 (359)
+|++++ ++||||.+++.+++++|+++|++||+++|+||+|..+..... ..+...+. .+.++++.|+||++|.++ +
T Consensus 212 ~v~l~~-p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r 290 (449)
T 3qgu_A 212 IIFFCS-PNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVR 290 (449)
T ss_dssp EEEEES-SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCC
T ss_pred EEEEeC-CCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccce
Confidence 999975 567999999999999999999999999999999865433211 11233332 234466779999998543 2
Q ss_pred -eEEecCHHHHH--------HHHHHHHhhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCce
Q 018243 215 -SVIVGSKEFIK--------KARRLRKTLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLR 281 (359)
Q Consensus 215 -g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 281 (359)
|++++++++++ .+.........+. +...+.++..+++ ...++.++++.++++++.+.|+++ |++
T Consensus 291 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 367 (449)
T 3qgu_A 291 LGWTVVPKALKYANGEPVHADWNRVMTTCFNGA--SNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-GFS 367 (449)
T ss_dssp CEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCC--CHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred eEEEecCHHHHhhhhhhHHHHHHHHhhcccCCC--CHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCe
Confidence 88888877654 3333333222222 3444444444443 234457777889999999999998 888
Q ss_pred EecCCccceEEEEEeccchHHHHHHHHHHHH-hcCceeccC------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 282 VDVDAVETNIVYFEITEDSKLYAACLLKKLE-EHGVLVMPE------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+.. +..++++|+.++. .+..++.+.|. ++||.+.|+ +..++||++ ..+++++++++++|++++++-.
T Consensus 368 ~~~-~~~~~~~~~~~~~---~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~--~~~~e~i~~~l~~l~~~~~~~~ 441 (449)
T 3qgu_A 368 VYG-GDDAPYIWVGFPG---KPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASA--FGSRENILEAVRRFKEAYGKRN 441 (449)
T ss_dssp EEE-SSSSSEEEEECTT---SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEEC--CSCHHHHHHHHHHHHHHHC---
T ss_pred eeC-CCCeeEEEEECCC---CCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHHHhcC
Confidence 753 4568899999873 46778888885 569999765 357899997 4699999999999999987654
Q ss_pred h
Q 018243 355 E 355 (359)
Q Consensus 355 ~ 355 (359)
.
T Consensus 442 ~ 442 (449)
T 3qgu_A 442 A 442 (449)
T ss_dssp -
T ss_pred c
Confidence 4
No 115
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=3.7e-31 Score=233.25 Aligned_cols=282 Identities=14% Similarity=0.097 Sum_probs=208.6
Q ss_pred hHHHHHHHHHHHHhCCCC---eEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCC
Q 018243 38 PTAFRLETEMAKVMGKEA---GLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDG 114 (359)
Q Consensus 38 ~~~~~l~~~la~~~~~~~---~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 114 (359)
+...++++.+++++|.+. .++++||++|+..++.++.. + .+++..+.|++... ...++..|++++.++.+.++
T Consensus 43 ~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~~-~--~~i~~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~ 118 (362)
T 3ffr_A 43 EVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCVE-K--KSFHCVNGSFSKRF-YEFAGELGREAYKEEAAFGK 118 (362)
T ss_dssp HHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHCS-S--EEEEEECSHHHHHH-HHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhccC-C--cEEEEcCcHHHHHH-HHHHHHhCCCeEEEecCCCC
Confidence 446788899999998842 46778889999999998883 5 55555554455221 12356778899999888788
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc-CcEEEEecccccchhhhcCchhHh
Q 018243 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH-GLKLHIDGARIFNAAVALGVPVRR 193 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~-~~~li~D~a~~~~~~~~~~~~~~~ 193 (359)
.+|+++|+ ++ +++++|+++++ +||||.++| +++|.++|++| |+++|+|++|+++... . +
T Consensus 119 ~~d~~~l~--~~--------~~~~~v~~~~~-~nptG~~~~---l~~i~~la~~~p~~~li~D~a~~~~~~~---~---~ 178 (362)
T 3ffr_A 119 GFYPADIT--VP--------ADAEIICLTHN-ETSSGVSMP---VEDINTFRDKNKDALIFVDAVSSLPYPK---F---D 178 (362)
T ss_dssp CCCGGGCC--CC--------TTCCEEEEESE-ETTTTEECC---HHHHTTSGGGSTTSEEEEECTTTTTSSC---C---C
T ss_pred CCCHHHHh--cc--------CCccEEEEEcC-CCCcceeCC---HHHHHHHHHhCCCCEEEEecccccCCcc---c---C
Confidence 89999988 44 78999999765 669999998 78899999999 9999999998665432 1 1
Q ss_pred hhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHHh--------------------h-CCCcchhHHHHHHHHHH
Q 018243 194 LVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRKT--------------------L-GGGMRQVGVLCAAALVA 251 (359)
Q Consensus 194 ~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~--------------------~-~~~~~~~~~~~~~~~~~ 251 (359)
+. ..|+++.|+||+++++.| |+++.++++.+.++..... . ..+. +.....+...+
T Consensus 179 ~~-~~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a 255 (362)
T 3ffr_A 179 WT-KIDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETP--NAMNIFLLGKV 255 (362)
T ss_dssp TT-SCSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCC--CHHHHHHHHHH
T ss_pred hh-HCcEEEEecccccCCCCceEEEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCc--hHHHHHHHHHH
Confidence 11 278999999999996566 8888899988887765430 0 1111 22222222233
Q ss_pred HH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCC---ccceEEEEEeccchHHHHHHHHHHHHhcCceeccC---
Q 018243 252 LQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDA---VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE--- 321 (359)
Q Consensus 252 l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~--- 321 (359)
++ ...++.+++..++++++.+.|+++||+++..+. ....++++.++. +..++.+.|.++||.+.++
T Consensus 256 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~~~~g~~~ 331 (362)
T 3ffr_A 256 TGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM----LPGEINKILEPFDMAVGAGYGS 331 (362)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS----CHHHHHHHHGGGTEEEEECSGG
T ss_pred HHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC----CHHHHHHHHHHCCeEEecCccc
Confidence 32 224557778889999999999999999875422 235567777764 6779999998889999764
Q ss_pred -CCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 322 -SSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 322 -~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
+.+++|++++..++++++++++++|++++
T Consensus 332 ~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 332 KKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp GTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 46789999988899999999999998764
No 116
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=100.00 E-value=1.3e-30 Score=233.31 Aligned_cols=329 Identities=19% Similarity=0.173 Sum_probs=231.7
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCCCC--c------cCCChHHHHHH----HHHHHHhCCCCe-EEcCCchHHHHHHHH
Q 018243 5 TVDLRSDTVTKPTEAMRAAMASAEVDDD--V------LMHDPTAFRLE----TEMAKVMGKEAG-LFVPSGTMGNLISVL 71 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~~~--~------~~~~~~~~~l~----~~la~~~~~~~~-~~~~~gt~a~~~~l~ 71 (359)
+++|.+.++. +|.+.+++.+...... . |...+...+++ +.+++++|.+.. +++++|++|+..++.
T Consensus 26 ~~~~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~~i~~~sGt~a~~~a~~ 103 (405)
T 2vi8_A 26 IELIASENFV--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHANVQPHSGAQANMAVYF 103 (405)
T ss_dssp EECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHH
T ss_pred eeeccCcccC--CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceEEEecCcHHHHHHHHH
Confidence 4677666554 6889999987653111 1 22234455555 689999999876 457899999999999
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCc--cceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccC
Q 018243 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGV--HPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHAN 148 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ 148 (359)
+++ ++|++|+++.++|.+....+......|. +++.++.+ .++.+|+++|++.+++ .++++|++ +++++
T Consensus 104 ~~~-~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~-------~~~~~v~~-~~~~~ 174 (405)
T 2vi8_A 104 TVL-EHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARL-------HRPKLIVA-AAAAY 174 (405)
T ss_dssp HHC-CTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHH-------HCCSEEEE-CCSSC
T ss_pred Hhc-CCCCEEEEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHh-------cCCeEEEE-eCCCC
Confidence 987 5999999999998776531111223343 56666654 5678899999999982 26788887 44442
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHH
Q 018243 149 CGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKAR 228 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~ 228 (359)
|... ++++|.++|++||+++|+|++|+++.... +.....+ ...|+++.|+||+++++.||++++++++.+.++
T Consensus 175 --~~~~---~l~~i~~l~~~~~~~li~Dea~~~g~~~~-~~~~~~~-~~~di~~~s~sK~~~g~~gG~~~~~~~~~~~l~ 247 (405)
T 2vi8_A 175 --PRII---DFAKFREIADEVGAYLMVDMAHIAGLVAA-GLHPNPV-PYAHFVTTTTHKTLRGPRGGMILCQEQFAKQID 247 (405)
T ss_dssp --CSCC---CHHHHHHHHHHHTCEEEEECTTTHHHHHT-TSSCCST-TTCSEEEEESSSTTCCCSCEEEEECHHHHHHHH
T ss_pred --CccC---CHHHHHHHHHHcCCEEEEEcccccccccc-CcCCCcc-ccCCEEEEeccccCCCCCCeEEEEcHHHHHHHH
Confidence 4433 48999999999999999999987654432 2111112 257888889999998667799999999888876
Q ss_pred HHHHhhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHH
Q 018243 229 RLRKTLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYA 304 (359)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (359)
.....+..+.. +....++...+++ ...++.+++..++++++.+.|+++ |+++..++..++++++.++. .+.+.
T Consensus 248 ~~~~~~~~~~~-~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~~~ 324 (405)
T 2vi8_A 248 KAIFPGIQGGP-LMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLVSGGTDNHLLLVDLRP-QQLTG 324 (405)
T ss_dssp HHHTTTTCSSC-CHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGG-GTCCH
T ss_pred hhhcccccCCC-CHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCCceEEEEEccC-CCCCH
Confidence 65433322221 2222222233332 344557788889999999999998 88875443467889998874 22357
Q ss_pred HHHHHHHHhcCceeccC----------CCcEEEEEeCC----CCCHHHHHHHHHHHHHHHHHHH
Q 018243 305 ACLLKKLEEHGVLVMPE----------SSTRVRIVVHH----QISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 305 ~~~~~~l~~~gi~~~~~----------~~~~lRi~~~~----~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
.++.+.|.++||.+.++ ..+++|++++. .++++++++++++|+++++++.
T Consensus 325 ~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~ 388 (405)
T 2vi8_A 325 KTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVG 388 (405)
T ss_dssp HHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence 78899999999998764 24679999874 4789999999999999987664
No 117
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=4.8e-31 Score=237.05 Aligned_cols=334 Identities=13% Similarity=0.122 Sum_probs=225.2
Q ss_pred cccccccCCCCCC-hH--HHHHHHHHcCCCCC------CccCCChHHHHHHHHHHHHh------CCC--CeEEcCCchHH
Q 018243 3 TRTVDLRSDTVTK-PT--EAMRAAMASAEVDD------DVLMHDPTAFRLETEMAKVM------GKE--AGLFVPSGTMG 65 (359)
Q Consensus 3 ~~~id~~~~~~~~-~~--~~~~~a~~~~~~~~------~~~~~~~~~~~l~~~la~~~------~~~--~~~~~~~gt~a 65 (359)
+.+|||..+.+.. |. +.+.+++.+...+. ..|+..++..++++.+++++ +.+ ..++++||++|
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~a 110 (417)
T 3g7q_A 31 PGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSA 110 (417)
T ss_dssp -CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred CCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHH
Confidence 4678999987765 32 66777776643222 24777778899999999997 232 34778888899
Q ss_pred HHHHHHHhhhhcCC-----eEEec-CCCcceeecccc---ccccCCccceeeecC-CCCCCCHHHHHHHhcCCCCCccCC
Q 018243 66 NLISVLVHCETRGS-----EVILG-DNSHIHIYENGG---ISTIGGVHPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYP 135 (359)
Q Consensus 66 ~~~~l~~~~~~~g~-----~vl~~-~~~~~~~~~~~~---~~~~~g~~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~ 135 (359)
+..++..++ ++|| +|+++ .|+|........ .....+..+..++.+ .++.+|+++++ ++ +
T Consensus 111 l~~~~~~l~-~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~--------~ 179 (417)
T 3g7q_A 111 FFYLFNLFA-GRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IG--------E 179 (417)
T ss_dssp HHHHHHHHS-BC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CC--------T
T ss_pred HHHHHHHHc-CCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--cc--------c
Confidence 999999887 4776 89987 888766543110 011123333334322 13557888887 55 6
Q ss_pred ceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCce-e
Q 018243 136 TTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV-G 214 (359)
Q Consensus 136 ~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~-g 214 (359)
++++|+++++ +||||.+++.+++++|+++|++||+++|+|++|.................+.++++.|+||+ ++++ +
T Consensus 180 ~~~~v~~~~p-~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r 257 (417)
T 3g7q_A 180 ETGMICVSRP-TNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSKL-GLPGSR 257 (417)
T ss_dssp TEEEEEEESS-CTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGGG-TCTTSC
T ss_pred CceEEEECCC-CCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEechhc-cCCCcc
Confidence 7899988555 56999999999999999999999999999999753211100001111112344667799995 4443 2
Q ss_pred -eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHH-----HhHHH-HhhhHHHHHHHHHHHHhc-CC--CceEec
Q 018243 215 -SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQ-----ENVLV-MLDGDHKKAKLLAEGLNQ-LK--GLRVDV 284 (359)
Q Consensus 215 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~-~~~~~~~~~~~l~~~l~~-~~--g~~~~~ 284 (359)
||++.++++.+.+.......+.+.+... +.++...++ ....+ .++.+.++++.+.+.|++ ++ ++.+.
T Consensus 258 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~- 334 (417)
T 3g7q_A 258 CGIIIANDKTITAIANMNGIISLAPGGMG--PAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIH- 334 (417)
T ss_dssp CEEEECCHHHHHHHHHHHHHHCCCCCSHH--HHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEE-
T ss_pred eEEEEeCHHHHHHHHHhhcceeeCCCcHH--HHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceee-
Confidence 8899999999998877776665543333 333333332 11221 344566677777777766 44 46664
Q ss_pred CCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC-------------CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018243 285 DAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES-------------STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-------------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.+..+.++|+.++. .+.+..++.+.|.++||.+.++. ..++|++++ .+++++++++++|+++++
T Consensus 335 ~~~~g~~~~~~~~~-~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~--~~~~~i~~~~~~l~~~l~ 411 (417)
T 3g7q_A 335 KPEGAIFLWLWFKD-LPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYV--PEPDKIEAGVKILAEEIE 411 (417)
T ss_dssp CCCBSSEEEEECTT-CSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESC--SCHHHHHHHHHHHHHHHH
T ss_pred CCCcceEEEEEcCC-CCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 34578899999875 12477899999999999997642 468999997 399999999999999998
Q ss_pred HHHh
Q 018243 352 GVCE 355 (359)
Q Consensus 352 ~~~~ 355 (359)
++.+
T Consensus 412 ~~~~ 415 (417)
T 3g7q_A 412 RAWR 415 (417)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8764
No 118
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=100.00 E-value=3e-31 Score=236.64 Aligned_cols=324 Identities=17% Similarity=0.141 Sum_probs=223.8
Q ss_pred ccccccCC---CCC-ChHHHHHHHHHcCCCCC----CccCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHHh
Q 018243 4 RTVDLRSD---TVT-KPTEAMRAAMASAEVDD----DVLMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~---~~~-~~~~~~~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~~ 73 (359)
.++||.++ ++. .++|.+.+++.+..... ..| ..+...++++.++++++. +..++++||++|+..++..+
T Consensus 46 ~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~ 124 (395)
T 1vef_A 46 EYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFA 124 (395)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHH
T ss_pred EEEEccCccccccCCCCCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHH
Confidence 46788775 333 36688888877643211 122 467889999999999954 34588899999999999876
Q ss_pred hh-hcCCeEEecCCCcceeeccccccccCCcccee---eecCCC----CCCCHHHHHHHhcCCCCCccCCceeEEEEecc
Q 018243 74 CE-TRGSEVILGDNSHIHIYENGGISTIGGVHPRT---VKNNQD----GTMDIDLIEAAIRDPKGEIVYPTTRLICLENT 145 (359)
Q Consensus 74 ~~-~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~---v~~~~~----~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~ 145 (359)
.. .++++|++.+++|.+.+. ......|.+.+. ++...+ ...|+++|++.++ +++++|+++ +
T Consensus 125 ~~~~~~~~vi~~~~~y~~~~~--~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~--------~~~~~v~~~-~ 193 (395)
T 1vef_A 125 RAHTGRKKFVAAMRGFSGRTM--GSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVD--------EETAAVILE-P 193 (395)
T ss_dssp HHHHSCCEEEEETTCCCCSSH--HHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCC--------TTEEEEEEC-S
T ss_pred HHHhCCCeEEEEcCCcCCCch--hhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhc--------cCEEEEEEe-C
Confidence 41 378889998887655443 124445544211 011000 0138999999998 678898884 4
Q ss_pred ccCCCceec-ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEeccccCCCcee-eEEecCH
Q 018243 146 HANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSKGLGAPVG-SVIVGSK 221 (359)
Q Consensus 146 ~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~ 221 (359)
.+||||... +.+++++|.++|++||+++|+|++|+ + +...+.. ........|++ |+||+++++.+ |+++.++
T Consensus 194 ~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~-~-~~~~g~~~~~~~~~~~~d~~--s~sK~~~~g~~~G~~~~~~ 269 (395)
T 1vef_A 194 VQGEGGVRPATPEFLRAAREITQEKGALLILDEIQT-G-MGRTGKRFAFEHFGIVPDIL--TLAKALGGGVPLGVAVMRE 269 (395)
T ss_dssp EETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-T-TTTTSSSSTHHHHTCCCSEE--EECGGGGTTSSCEEEEEEH
T ss_pred ccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-C-CccCCchhHhhhcCCCCCEE--EEcccccCCCceEEEEehH
Confidence 566899765 57889999999999999999999986 2 2222221 22222246765 77999986544 7788887
Q ss_pred HHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhcCCCceE-ecCCccceEEEEEeccc
Q 018243 222 EFIKKARRLRKTLGGGMRQVGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQLKGLRV-DVDAVETNIVYFEITED 299 (359)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~~~g~~~-~~~~~~~~~~~~~~~~~ 299 (359)
++++.++.. ..+.++..+...++++..+++... +...++..++++++.+.|+++ +..+ ...+..++++++.++.
T Consensus 270 ~~~~~l~~~--~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~g~~~~~~~~~- 345 (395)
T 1vef_A 270 EVARSMPKG--GHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAI-PSPKIREVRGMGLMVGLELKE- 345 (395)
T ss_dssp HHHHTSCTT--SSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTS-CCTTEEEEEEETTEEEEEESS-
T ss_pred HHHhhhccC--CcCCCcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-hcCceEEEEEEEEEEEEEEcC-
Confidence 776665331 123344445566666666665432 235667778899999999887 3221 1113467888998875
Q ss_pred hHHHHHHHHHHHH-hcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 300 SKLYAACLLKKLE-EHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 300 ~~~~~~~~~~~l~-~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
+..++.+.|. ++||.+.+++..++|++++...+++++++++++|++++
T Consensus 346 ---~~~~l~~~l~~~~gi~v~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 346 ---KAAPYIARLEKEHRVLALQAGPTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp ---CSHHHHHHHHHHHCEECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred ---hHHHHHHHHHHHCCeEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 3567889997 99999999888899999988899999999999998875
No 119
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.3e-30 Score=238.10 Aligned_cols=326 Identities=16% Similarity=0.141 Sum_probs=220.3
Q ss_pred HHHHHHHHcCCC-CCCccCCChHHHHHHHHHHHHh-----CCC----CeEEcCCchHHHHHHHHHhhhhcCC----eEEe
Q 018243 18 EAMRAAMASAEV-DDDVLMHDPTAFRLETEMAKVM-----GKE----AGLFVPSGTMGNLISVLVHCETRGS----EVIL 83 (359)
Q Consensus 18 ~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~~-----~~~----~~~~~~~gt~a~~~~l~~~~~~~g~----~vl~ 83 (359)
+.+.+++.+... ....|+...+..++++.+++++ |.+ ..++++|+++++..++..++ ++|| .|++
T Consensus 108 ~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~-~~gd~~~d~Vlv 186 (498)
T 3ihj_A 108 KRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILV-SGGGKSRTGVMI 186 (498)
T ss_dssp HHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHC-CCCGGGSEEEEE
T ss_pred HHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHc-CCCCCCCCEEEE
Confidence 344444444321 2345777788888999988877 342 23666677778888888777 4654 9999
Q ss_pred cCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHH
Q 018243 84 GDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDS 161 (359)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~ 161 (359)
+.|+|..... .+...|.+++.++.++ ++.+|+++|++.+++.... .++++|++++ ++||||.+++.+++++
T Consensus 187 ~~p~y~~~~~---~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~---~~~k~i~l~n-p~NPTG~v~s~~~l~~ 259 (498)
T 3ihj_A 187 PIPQYPLYSA---VISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDH---CDPKVLCIIN-PGNPTGQVQSRKCIED 259 (498)
T ss_dssp EESCCTHHHH---HHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTT---SEEEEEEEES-SCTTTCCCCCHHHHHH
T ss_pred eCCCchhHHH---HHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhcc---CCCeEEEEEC-CCCCCCCcCCHHHHHH
Confidence 9999877543 3677888999887654 4688999999999831100 1689999975 5679999999999999
Q ss_pred HHHHHHHcCcEEEEecccccchhhh--cCchhHhhh--------cCccEEEE-eccccC-CCc--eeeEEe---cCHHHH
Q 018243 162 VGEIAKKHGLKLHIDGARIFNAAVA--LGVPVRRLV--------QAADSASV-CLSKGL-GAP--VGSVIV---GSKEFI 224 (359)
Q Consensus 162 i~~~~~~~~~~li~D~a~~~~~~~~--~~~~~~~~~--------~~~d~~~~-s~~K~~-g~~--~gg~~~---~~~~~~ 224 (359)
|+++|++||++||+||+|..+.+.. ...++..+. ....++++ |+||.| |.+ .+||++ .++++.
T Consensus 260 i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~ 339 (498)
T 3ihj_A 260 VIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIK 339 (498)
T ss_dssp HHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHH
T ss_pred HHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHH
Confidence 9999999999999999976544321 122333321 12234555 999999 433 237776 689999
Q ss_pred HHHHHHHHhhCCCcchhHHHHHHHHHHH----------HHh---HHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceE
Q 018243 225 KKARRLRKTLGGGMRQVGVLCAAALVAL----------QEN---VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNI 291 (359)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l----------~~~---~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~ 291 (359)
+.+...... ..+.+...+ .+....+ ..+ .+..++++.++++++.+.|+++||+++. ++..+.+
T Consensus 340 ~~l~~~~~~-~~~~~~~~q--~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~-~p~gg~~ 415 (498)
T 3ihj_A 340 GQLVKLLSV-RLCPPVSGQ--AAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCN-PLQGAMY 415 (498)
T ss_dssp HHHHHHHHH-SCCCCHHHH--HHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECC-CCCBSSE
T ss_pred HHHHHHHhc-cCCCCHHHH--HHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEec-CCCeEEE
Confidence 988766553 222322222 2222222 122 2335677889999999999999998874 4457778
Q ss_pred EEEEeccchH---------HHHHHH--HHHHHhcCceeccC-------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 292 VYFEITEDSK---------LYAACL--LKKLEEHGVLVMPE-------SSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 292 ~~~~~~~~~~---------~~~~~~--~~~l~~~gi~~~~~-------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+|+.+..+.. .+.+++ .+.|.++||.++|+ +..++|+++ ..+++++++++++|.++++++
T Consensus 416 ~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~--~~~~e~l~~~i~~L~~~~~~~ 493 (498)
T 3ihj_A 416 AFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTI--LPPVEKLKTVLQKVKDFHINF 493 (498)
T ss_dssp ECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEEC--CSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEe--CCCHHHHHHHHHHHHHHHHHH
Confidence 8877653211 123443 44558899999764 345799999 489999999999999999998
Q ss_pred Hhhc
Q 018243 354 CEEN 357 (359)
Q Consensus 354 ~~~~ 357 (359)
.++.
T Consensus 494 ~~~~ 497 (498)
T 3ihj_A 494 LEKY 497 (498)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 7654
No 120
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=1.7e-31 Score=236.88 Aligned_cols=323 Identities=13% Similarity=0.080 Sum_probs=221.8
Q ss_pred cccccccCCCC------CChHHHHHHHHHcCC---CCCCccCCChHHHHHHHHHHHHh-CCC-------C--eEEcCCch
Q 018243 3 TRTVDLRSDTV------TKPTEAMRAAMASAE---VDDDVLMHDPTAFRLETEMAKVM-GKE-------A--GLFVPSGT 63 (359)
Q Consensus 3 ~~~id~~~~~~------~~~~~~~~~a~~~~~---~~~~~~~~~~~~~~l~~~la~~~-~~~-------~--~~~~~~gt 63 (359)
...|||.-+.+ ..+.+.+.++.. .. .....|+...+..++++++++++ +.. . .+++++|+
T Consensus 29 ~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~ 107 (405)
T 3k7y_A 29 EEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGT 107 (405)
T ss_dssp SSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHH
T ss_pred cCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCccccccceEEEEcCchH
Confidence 35689987753 223477777754 21 23456888889999999999987 221 1 15667777
Q ss_pred HHHHHHHHHhhh-hcCCeEEecCCCcceeeccccccccCCccceeeec--CCCCCCCHHHHHHHhcCCCCCccCCceeEE
Q 018243 64 MGNLISVLVHCE-TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN--NQDGTMDIDLIEAAIRDPKGEIVYPTTRLI 140 (359)
Q Consensus 64 ~a~~~~l~~~~~-~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v 140 (359)
+|+..++..+.. .+ |+|++++|+|.... ..++..|.+++.++. ++++.+|++.+++.+++. ++++++
T Consensus 108 ~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~~~i 177 (405)
T 3k7y_A 108 GAIFVLLEFLKMLNV-ETLYVTNPPYINHV---NMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNI------PNGSSV 177 (405)
T ss_dssp HHHHHHHHHHHTTTC-CEEEEESSCCHHHH---HHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHS------CSSCEE
T ss_pred HHHHHHHHHHHhcCC-CEEEEeCCCCHhHH---HHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhC------CCCeEE
Confidence 788887777662 27 99999999977654 347888999999975 335789999999999731 356788
Q ss_pred EEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcC---chhHhhhc-CccEEEE-eccccCCCcee-
Q 018243 141 CLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALG---VPVRRLVQ-AADSASV-CLSKGLGAPVG- 214 (359)
Q Consensus 141 ~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~---~~~~~~~~-~~d~~~~-s~~K~~g~~~g- 214 (359)
++.+++|||||.+++.+++++|+++|++|++++|+||+|......... .+...+.. ...++++ |+||.|+.++.
T Consensus 178 ~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlR 257 (405)
T 3k7y_A 178 ILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGER 257 (405)
T ss_dssp EECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTT
T ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCcccc
Confidence 886666889999999999999999999999999999996432221000 12223322 2335554 99999986544
Q ss_pred -eEEe---cCHHHHHHHHH-HHH---hhCCCcchhHHHHHHHHHHH---------HHhHHHHhhhHHHHHHHHHHHHh--
Q 018243 215 -SVIV---GSKEFIKKARR-LRK---TLGGGMRQVGVLCAAALVAL---------QENVLVMLDGDHKKAKLLAEGLN-- 275 (359)
Q Consensus 215 -g~~~---~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~l---------~~~~~~~~~~~~~~~~~l~~~l~-- 275 (359)
||++ .++++++.+.. +.. ....+. +...+.++...+ .+.+...++++.++++.+.+.|+
T Consensus 258 iG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~ 335 (405)
T 3k7y_A 258 AGALHIVCKNQEEKKIVFNNLCFIVRKFYSSP--VIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETY 335 (405)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHTTTSSC--CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCHHHHHHHHHHHHHHHhcccCCC--cHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7754 47777665532 221 111121 222222222222 22233456678889999999999
Q ss_pred --cCCC----ceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018243 276 --QLKG----LRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 276 --~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
++ | +++. ++.++.|+|+.++. +++++|.++||.+.|++ ||+++ ..+++++++++++|+++
T Consensus 336 ~~~~-g~~~~~~~~-~p~gg~f~~~~l~~-------~~~~~L~~~gV~v~p~~----Ris~a-~~~~~~i~~~~~~i~~~ 401 (405)
T 3k7y_A 336 QKKY-NLNYDWNVY-KKQRGLFSFVPLLA-------KIAEHLKTHHIYIINNG----RINVS-GITKNNVDYIADKICLS 401 (405)
T ss_dssp GGGG-TCCCCGGGG-SSCCSSEEECGGGG-------GGTTTTTTTTEECCTTS----EEEGG-GCCTTHHHHHHHHHHHH
T ss_pred hhhc-CCCCCCccc-cCCceEEEecCCCH-------HHHHHHHHCCEeecCCC----eEEEe-ccCHHHHHHHHHHHHHH
Confidence 76 4 4543 45677788876653 34466788999999976 99996 67899999999999998
Q ss_pred HHH
Q 018243 350 YAG 352 (359)
Q Consensus 350 ~~~ 352 (359)
+++
T Consensus 402 ~~~ 404 (405)
T 3k7y_A 402 LSQ 404 (405)
T ss_dssp HHC
T ss_pred Hhh
Confidence 864
No 121
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=100.00 E-value=7.8e-31 Score=234.81 Aligned_cols=331 Identities=16% Similarity=0.128 Sum_probs=234.0
Q ss_pred cccccccCC---CCCC-hHHHHHHHHHcCCCCCC---ccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018243 3 TRTVDLRSD---TVTK-PTEAMRAAMASAEVDDD---VLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~---~~~~-~~~~~~~a~~~~~~~~~---~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.+++||.++ ++.+ ++|++.+++.+...... .....+...++++.++++++.+..++++||++|+..++..++.
T Consensus 39 ~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~~a~~~al~~~~~ 118 (406)
T 4adb_A 39 KEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARK 118 (406)
T ss_dssp CEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHH
T ss_pred CEEEECCCchhhcccCCCCHHHHHHHHHHHHhcccccCCcCCHHHHHHHHHHHhhCCCCeEEEeCcHHHHHHHHHHHHHH
Confidence 356899886 4433 35888888876543311 1224577899999999999998889999999999999998864
Q ss_pred h------cC-CeEEecCCCcceeeccccccccCC------------ccceeeecCCCCCCCHHHHHHHhcCCCCCccCCc
Q 018243 76 T------RG-SEVILGDNSHIHIYENGGISTIGG------------VHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPT 136 (359)
Q Consensus 76 ~------~g-~~vl~~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 136 (359)
. +| ++|++.+++|..... ......+ .++..++. .|+++|++.++ ++
T Consensus 119 ~~~~~~~~g~~~vi~~~~~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~--------~~ 183 (406)
T 4adb_A 119 FAHDRYGSHKSGIVAFKNAFHGRTL--FTVSAGGQPAYSQDFAPLPADIRHAAY-----NDINSASALID--------DS 183 (406)
T ss_dssp HHHHHTCTTCCEEEEETTCCCCSSH--HHHHHSSCGGGTGGGCSCCSSEEEECT-----TCHHHHHTTCS--------TT
T ss_pred HHHhcCCCCCcEEEEECCCcCCCcH--HHhhccCCccccccCCCCCCCceEeCC-----CcHHHHHHHhc--------CC
Confidence 2 55 889999998776543 1122222 12333333 28999999888 78
Q ss_pred eeEEEEeccccCCCceec--ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc--hhHhhhcCccEEEEeccccCCCc
Q 018243 137 TRLICLENTHANCGGRCL--SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV--PVRRLVQAADSASVCLSKGLGAP 212 (359)
Q Consensus 137 ~~~v~i~~~~~~ptG~~~--~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~~d~~~~s~~K~~g~~ 212 (359)
+++|+++ + +||+|.++ +.+++++|.++|++||+++|+||+|+. +...+. .........|++ ++||.++++
T Consensus 184 ~~~v~~~-p-~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~--~~~~g~~~~~~~~~~~~d~~--t~sK~~~~G 257 (406)
T 4adb_A 184 TCAVIVE-P-IQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTG--VGRTGELYAYMHYGVTPDLL--TTAKALGGG 257 (406)
T ss_dssp EEEEEEC-S-EETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTT--TTTTSSSSHHHHHTCCCSEE--EECGGGGTT
T ss_pred eEEEEEe-C-CcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCccchhHHHHhcCCCCCEE--EechhhcCC
Confidence 9999995 4 56888877 889999999999999999999999852 222222 222232345666 569999843
Q ss_pred e-eeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhcCC-Cce-EecCCcc
Q 018243 213 V-GSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQLK-GLR-VDVDAVE 288 (359)
Q Consensus 213 ~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~~~-g~~-~~~~~~~ 288 (359)
. .|++++++++++.+.... .+.++..++..++++..+++... ++..++..++++++.+.|+++. .+. +...+..
T Consensus 258 ~r~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 335 (406)
T 4adb_A 258 FPVGALLATEECARVMTVGT--HGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGL 335 (406)
T ss_dssp SCCEEEEECHHHHHTCCTTS--SCCSSTTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred CCeEEEEEcHHHHhhhccCC--cCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEE
Confidence 2 388999999887754332 23344456666666666665321 3366677788888888887751 111 1111235
Q ss_pred ceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 018243 289 TNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCEE 356 (359)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 356 (359)
+.++++.++.....+..++.+.|.++||.+.+++..++|++++...+++++++++++|+++++++.++
T Consensus 336 g~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~~ 403 (406)
T 4adb_A 336 GLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAGGNVVRFAPALNVSEEEVTTGLDRFAAACEHFVSR 403 (406)
T ss_dssp TTEEEEEECTTTTTCHHHHHHHHHHTTEECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEEEEEEEeCCcHHHHHHHHHHHHHCCcEEeecCCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 77888888763112578899999889999999988999998888999999999999999999987653
No 122
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=100.00 E-value=7.7e-31 Score=234.94 Aligned_cols=329 Identities=17% Similarity=0.169 Sum_probs=233.4
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCC--CCccC------CChHHHHHH----HHHHHHhCCCCe-EEcCCchHHHHHHH
Q 018243 4 RTVDLRSDTVTKPTEAMRAAMASAEVD--DDVLM------HDPTAFRLE----TEMAKVMGKEAG-LFVPSGTMGNLISV 70 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~--~~~~~------~~~~~~~l~----~~la~~~~~~~~-~~~~~gt~a~~~~l 70 (359)
++|||.++.... +|.+.+++.+.... ...|. ..+....++ +.+++++|.+.. +++++|++|+..++
T Consensus 24 ~~i~~~~~~~~~-~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~~~i~~~sGt~a~~~~~ 102 (407)
T 2dkj_A 24 EGLELIASENFV-SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWANVQPHSGSQANMAVY 102 (407)
T ss_dssp TSEECCTTCCCC-CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHH
T ss_pred cceeeccCCCCC-CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCcceEEecchHHHHHHHH
Confidence 568888876666 78999999876532 12222 122222333 489999998876 77899999999999
Q ss_pred HHhhhhcCCeEEecCCCcceeeccccccccCCccceeeec--C-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEecccc
Q 018243 71 LVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN--N-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHA 147 (359)
Q Consensus 71 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~ 147 (359)
..+. ++|++|++++++|.+.+.....+...|..+..++. + .++.+|+++|++.+++ .++++|++ +.++
T Consensus 103 ~~~~-~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~~v~~-~~p~ 173 (407)
T 2dkj_A 103 MALM-EPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALE-------HRPKVIVA-GASA 173 (407)
T ss_dssp HHHC-CTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHH-------HCCSEEEE-CCSS
T ss_pred HHhc-CCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhh-------cCCeEEEE-eccc
Confidence 9886 59999999999988764211224555654444433 3 3678899999999983 37888888 4455
Q ss_pred CCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecC-HHHHHH
Q 018243 148 NCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGS-KEFIKK 226 (359)
Q Consensus 148 ~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~-~~~~~~ 226 (359)
|| ...+ +++|.++|++||+++|+|++|+.|... .+.....+ ...|+++.|+||+++++.+|+++++ +++.+.
T Consensus 174 ~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~-~~~~~~~~-~~~di~~~s~sK~l~g~~~G~~~~~~~~~~~~ 246 (407)
T 2dkj_A 174 YP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVA-AGLHPNPL-PYAHVVTSTTHKTLRGPRGGLILSNDPELGKR 246 (407)
T ss_dssp CC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHH-TTCSCCCT-TTCSEEEEESSGGGCCCSCEEEEESCHHHHHH
T ss_pred cC--CCCC---HHHHHHHHHHcCCEEEEEccccccccc-cCccCCcc-ccccEEEEeccccCCCCCceEEEECCHHHHHH
Confidence 55 4444 899999999999999999998764432 22211112 2478888999999977777888888 899888
Q ss_pred HHHHHHhhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHH
Q 018243 227 ARRLRKTLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKL 302 (359)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 302 (359)
++.....+..+.. +....+++..+++ ...++..++..++++++.+.|+++ |+++..++..++++++.++. .+.
T Consensus 247 l~~~~~~~~~~~~-~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~ 323 (407)
T 2dkj_A 247 IDKLIFPGIQGGP-LEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GYRIVTGGTDNHLFLVDLRP-KGL 323 (407)
T ss_dssp HHHHHTTTTCSSC-CHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGG-GTC
T ss_pred HHhhhcccccCCC-cHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecCCCCceEEEEECcc-cCC
Confidence 7765543332221 2222223333332 344557778889999999999998 88875444578889998874 223
Q ss_pred HHHHHHHHHHhcCceeccCC----------CcEEEEEeCC----CCCHHHHHHHHHHHHHHHHH
Q 018243 303 YAACLLKKLEEHGVLVMPES----------STRVRIVVHH----QISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~~~~~----------~~~lRi~~~~----~~~~~~i~~~~~~l~~~~~~ 352 (359)
+..++.+.|.++||.+.++. ..++|++++. ..+++++++++++|++++++
T Consensus 324 ~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 324 TGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp CHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 67789999999999987642 4679999864 27999999999999999887
No 123
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=100.00 E-value=4.4e-30 Score=229.90 Aligned_cols=284 Identities=19% Similarity=0.209 Sum_probs=215.4
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018243 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.+...++++.+++++|.+..++++||++|+..++.+++ ++||+|+++++.|.+.+... ..+...|++++.++.+
T Consensus 113 ~~~~~~l~~~lA~l~g~~~~v~~~sG~~Ai~~al~~l~-~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~---- 187 (445)
T 1qgn_A 113 NPTTVVLEEKISALEGAESTLLMASGMCASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA---- 187 (445)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHS-CSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS----
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHh-CCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC----
Confidence 57789999999999999888999999999999999887 59999999999988765410 0255678888888765
Q ss_pred CCHHHHHHHhcCCCCCccCCce-eEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh
Q 018243 116 MDIDLIEAAIRDPKGEIVYPTT-RLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~-~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
|+++|++.++ +++ ++|+++++ +||||.+.+ +++|.++|+++|+++|+|++|..+.. .. ++
T Consensus 188 -d~~~l~~ai~--------~~tv~lV~le~p-~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~---~~---~~ 248 (445)
T 1qgn_A 188 -DVGALELALN--------QKKVNLFFTESP-TNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLN---QK---AL 248 (445)
T ss_dssp -CHHHHHHHHH--------HSCEEEEEEESS-CTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTT---CC---TT
T ss_pred -CHHHHHHHhc--------cCCCCEEEEeCC-CCCCCcccC---HHHHHHHHHHcCCEEEEECCCccccc---CC---cc
Confidence 8999999998 677 99999665 559999987 89999999999999999999754322 11 12
Q ss_pred hcCccEEEEeccccCCCce---eeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHH
Q 018243 195 VQAADSASVCLSKGLGAPV---GSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLA 271 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 271 (359)
..++|+++.|+||++|++. +|++++++++++.+......++... ++..++++..+++.... ++++..++++++.
T Consensus 249 ~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~~~g~~~--~~~~a~~~~~~l~~l~~-r~~~~~~~a~~l~ 325 (445)
T 1qgn_A 249 ALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGAL--NPNAAYLIIRGMKTLHL-RVQQQNSTALRMA 325 (445)
T ss_dssp TTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCCCC--CHHHHHHHHHHGGGHHH-HHHHHHHHHHHHH
T ss_pred ccCCEEEEECCcccccccccceEEEEEECHHHHHHHHHHHHHhCCCC--CHHHHHHHHHhHHHHHH-HHHHHHHHHHHHH
Confidence 2378999999999998764 6899999999888877666666554 33444444555555433 6677778899999
Q ss_pred HHHhcCCCc-eEecCC---------------ccceEEEEEeccchHHHHHHHHHHHHhcCceeccC--------------
Q 018243 272 EGLNQLKGL-RVDVDA---------------VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE-------------- 321 (359)
Q Consensus 272 ~~l~~~~g~-~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~-------------- 321 (359)
+.|++.|++ .+..+. ..+++++|.++.. ......+.+.|...++.+..|
T Consensus 326 ~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~-~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h 404 (445)
T 1qgn_A 326 EILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGD-LLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSY 404 (445)
T ss_dssp HHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSC-HHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHS
T ss_pred HHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCC-HHHHHHHHHhCCCceEeccCCCCceeeeccccccc
Confidence 999999887 443331 2577888998752 224667777775444433211
Q ss_pred -------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 322 -------------SSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 322 -------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
..+.||++++ .|+++++++.|++++++
T Consensus 405 ~~~~~~~~~~~g~~~~~iRlSvG----~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 405 WDLSQSDRAKYGIMDNLVRFSFG----VEDFDDLKADILQALDS 444 (445)
T ss_dssp TTSCHHHHHTTTCCSSEEEEECC----SSCHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHhh
Confidence 2468999995 46899999999998864
No 124
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.8e-30 Score=231.53 Aligned_cols=327 Identities=14% Similarity=0.105 Sum_probs=227.5
Q ss_pred cccccccCC---CCCC-hHHHHHHHHHcCCCCCC---ccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhh
Q 018243 3 TRTVDLRSD---TVTK-PTEAMRAAMASAEVDDD---VLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 3 ~~~id~~~~---~~~~-~~~~~~~a~~~~~~~~~---~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.+++||.++ ++.+ .+|++.+++.+...... .....+...++++.++++++.+..++++||++|+..++..+..
T Consensus 36 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~ea~~~al~~~~~ 115 (395)
T 3nx3_A 36 KKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASALERVFFTNSGTESIEGAMKTARK 115 (395)
T ss_dssp CEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCCTTSBCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHH
T ss_pred CEEEECCCcHHhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHH
Confidence 357899887 2222 35888888877543211 1234677899999999999987789999999999999988763
Q ss_pred h------cCCeEEecCCCcceeeccccccccC------------CccceeeecCCCCCCCHHHHHHHhcCCCCCccCCce
Q 018243 76 T------RGSEVILGDNSHIHIYENGGISTIG------------GVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTT 137 (359)
Q Consensus 76 ~------~g~~vl~~~~~~~~~~~~~~~~~~~------------g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 137 (359)
. ++++|++.+++|..... ...... +.++..++.+ |+++|++.++ +++
T Consensus 116 ~~~~~g~~~~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~--------~~~ 180 (395)
T 3nx3_A 116 YAFNKGVKGGQFIAFKHSFHGRTL--GALSLTANEKYQKPFKPLISGVKFAKYN-----DISSVEKLVN--------EKT 180 (395)
T ss_dssp HHHHTTCTTCEEEEETTCCCCSSH--HHHTTCCCHHHHGGGCSCCSCEEEECTT-----CHHHHHTTCC--------TTE
T ss_pred HhhccCCCCCEEEEEcCCcCCCCH--HHHhhcCCcccccccCCCCCCcEEeCCC-----CHHHHHHhcc--------CCe
Confidence 2 46889999988765432 112222 2234444443 8999999988 688
Q ss_pred eEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eE
Q 018243 138 RLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SV 216 (359)
Q Consensus 138 ~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~ 216 (359)
++|+++++++++++..++.+++++|.++|++||+++|+||+|...................|++ ++||.++++.+ |+
T Consensus 181 ~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~G~~~G~ 258 (395)
T 3nx3_A 181 CAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIM--TSAKALGCGLSVGA 258 (395)
T ss_dssp EEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGTTTSCCEE
T ss_pred EEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEE--EecccccCCCceEE
Confidence 9999988777555556788999999999999999999999975221111111112222234554 56798875434 78
Q ss_pred EecCHHH-HHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhc----CCCceEecCCccce
Q 018243 217 IVGSKEF-IKKARRLRKTLGGGMRQVGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQ----LKGLRVDVDAVETN 290 (359)
Q Consensus 217 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~----~~g~~~~~~~~~~~ 290 (359)
+++++++ .+.++.. ..+.++..+++.++++..+++... ++..++..++.+++++.|++ .|.+... +..++
T Consensus 259 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~g~ 334 (395)
T 3nx3_A 259 FVINQKVASNSLEAG--DHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKR--KGLGF 334 (395)
T ss_dssp EEECHHHHHHHSCTT--CCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE--EEETT
T ss_pred EEEchhhhhhhcCCc--ccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE--EeEEE
Confidence 8889888 6665322 234445556677777777775432 22444555555555555544 4444432 34678
Q ss_pred EEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 291 IVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
++++.++.. .+..++.+.|.++||.+.+++..++|++++...+++++++++++|++++++
T Consensus 335 ~~~~~~~~~--~~~~~~~~~l~~~Gi~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 335 MQGLSLDKS--VKVAKVIQKCQENALLLISCGENDLRFLPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp EEEEEECTT--SCHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEeCCc--chHHHHHHHHHHCCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 888888752 257789999999999999988899999998899999999999999998864
No 125
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.6e-31 Score=233.17 Aligned_cols=312 Identities=16% Similarity=0.109 Sum_probs=222.1
Q ss_pred cccccccCCCCC-ChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHHhhhhcCC
Q 018243 3 TRTVDLRSDTVT-KPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLVHCETRGS 79 (359)
Q Consensus 3 ~~~id~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~~~~~~g~ 79 (359)
..+|||.++.+. .++|++.+++.+.......|..... .++++.++++++.+ ..++++||++++..++..+. ||
T Consensus 15 ~~~id~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~-~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~---gd 90 (350)
T 3fkd_A 15 SEIVNFSTTVWTDGDKDHLEKHLVENLNCIRHYPEPDA-GTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR---GS 90 (350)
T ss_dssp -CCEECSCCSCCCSCCHHHHHHHHHTGGGGGSCCCTTC-HHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT---TC
T ss_pred ccEEEccCCCCCCCCCHHHHHHHHHhHhHHhcCCCCcH-HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC---CC
Confidence 357999988554 4559999999886633334544444 79999999999976 34666677778877777766 89
Q ss_pred eEEecCCCcceeeccccccccCCccceeeec-CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhh
Q 018243 80 EVILGDNSHIHIYENGGISTIGGVHPRTVKN-NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEY 158 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~ 158 (359)
+|+++.|+|.+... .++..|.+++.++. ++...+++ +++++|++++ ++||||.+++.++
T Consensus 91 ~Vi~~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~~~----------------~~~~~v~i~~-p~nptG~~~~~~~ 150 (350)
T 3fkd_A 91 RSLIAIPSFAEYED---ACRMYEHEVCFYPSNEDIGEADF----------------SNMDFCWLCN-PNNPDGRLLQRTE 150 (350)
T ss_dssp EEEEEESCCHHHHH---HHHHTTCEEEEEETTSCGGGSCC----------------TTCSEEEEES-SCTTTCCCCCHHH
T ss_pred EEEEeCCCcHHHHH---HHHHcCCeEEEEecCCccccCcc----------------CCCCEEEEeC-CCCCcCCCCCHHH
Confidence 99999999887654 36778999999987 54333332 3577888855 4669999999877
Q ss_pred HHHHHHHHHHcCcEEEEecccccchhhhcCch-hHhhh-cCccEEEEeccccCCCce-e-eEEecCHHHHHHHHHHHHhh
Q 018243 159 TDSVGEIAKKHGLKLHIDGARIFNAAVALGVP-VRRLV-QAADSASVCLSKGLGAPV-G-SVIVGSKEFIKKARRLRKTL 234 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~-~~~d~~~~s~~K~~g~~~-g-g~~~~~~~~~~~~~~~~~~~ 234 (359)
+.+|+++|+++ ++|+|++|...... +.. ..... .+.++++.|+||++|.++ + |+++.++++.+.++.....
T Consensus 151 l~~l~~~~~~~--~li~Dea~~~~~~~--~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~- 225 (350)
T 3fkd_A 151 ILRLLNDHPDT--TFVLDQSYVSFTTE--EVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFSTP- 225 (350)
T ss_dssp HHHHHHHCTTS--EEEEECTTTTSCSS--CCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTCCT-
T ss_pred HHHHHHhCCCC--EEEEECchhhhccC--cchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhCCC-
Confidence 77777777655 99999997543322 221 11111 123356669999998543 2 8888899998887654432
Q ss_pred CCCcchhHHHHHHHHHHHHHh---HHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHH
Q 018243 235 GGGMRQVGVLCAAALVALQEN---VLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKL 311 (359)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (359)
+..+...+.++...++.. .+ ..++..++++++.+.|+++|++.+. +..++++|+.++.. +..++.+.|
T Consensus 226 ---~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~~~~~~~~---~~~~l~~~L 296 (350)
T 3fkd_A 226 ---WAVNALAIEAAKFILIHPAQFTL-PIRKWQRNTVDFITALNRLDGVEVH--PSGTTFFLLRLKKG---TAAELKKYM 296 (350)
T ss_dssp ---TCSCHHHHHHHHHHHHCTTTTCC-CHHHHHHHHHHHHHHHHHSTTEEEC--CCSSSEEEEEESSS---CHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHhCHHHHHH-HHHHHHHHHHHHHHHHhcCCCcEEC--CCCCcEEEEECCCC---CHHHHHHHH
Confidence 223455555666666432 23 3344448889999999998898874 45788888888763 678999999
Q ss_pred Hh-cCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 312 EE-HGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 312 ~~-~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
.+ +||.+.++. ..++|++++ +++++++++++|+++.++...
T Consensus 297 ~~~~gi~v~~g~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~~~~~~~ 344 (350)
T 3fkd_A 297 LEEYNMLIRDASNFRGLDESYVRITTQ---RPAQNQLFIKALETFLEKYEG 344 (350)
T ss_dssp HHTTCEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHHTC---
T ss_pred HHHCCEEEEeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHHHhcc
Confidence 77 999997763 578999984 789999999999999887654
No 126
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=4.1e-31 Score=237.46 Aligned_cols=324 Identities=16% Similarity=0.083 Sum_probs=222.8
Q ss_pred cccccccCCC---CC---ChHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhCC-------C---CeEEcCCchH
Q 018243 3 TRTVDLRSDT---VT---KPTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMGK-------E---AGLFVPSGTM 64 (359)
Q Consensus 3 ~~~id~~~~~---~~---~~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~~-------~---~~~~~~~gt~ 64 (359)
+..|||..+. +. .+.+.+.+++.+.... ...|....+..++++.+++++.. + ..++++||++
T Consensus 49 ~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~ 128 (420)
T 4f4e_A 49 PTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTG 128 (420)
T ss_dssp SSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHH
T ss_pred CCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCccHH
Confidence 4578998883 22 2237888888775433 23566677789999999998843 2 2367777888
Q ss_pred HHHHHH--HHhhhhcCCeEEecCCCcceeeccccccccCCccceeeec--CCCCCCCHHHHHHHhcCCCCCccCCceeEE
Q 018243 65 GNLISV--LVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN--NQDGTMDIDLIEAAIRDPKGEIVYPTTRLI 140 (359)
Q Consensus 65 a~~~~l--~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v 140 (359)
|+..++ ..++ .+||+|++++|+|.+... .++..|.+++.++. ++++.+|++.+++.+++.. ++++++
T Consensus 129 al~~~~~~~~~~-~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-----~~~~~v 199 (420)
T 4f4e_A 129 ALKIGADFLRTL-NPKAKVAISDPSWENHRA---LFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYE-----PGTIVV 199 (420)
T ss_dssp HHHHHHHHHHHH-CTTCCEEEEESCCHHHHH---HHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCC-----TTCEEE
T ss_pred HHHHHHHHHHHh-CCCCEEEEeCCCcHhHHH---HHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCC-----CCCEEE
Confidence 888884 3445 599999999999887553 37778989999976 4578899999999998431 456777
Q ss_pred EEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh--cCchhHhhh--cCccEEEEeccccCCCcee--
Q 018243 141 CLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA--LGVPVRRLV--QAADSASVCLSKGLGAPVG-- 214 (359)
Q Consensus 141 ~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~--~~~~~~~~~--~~~d~~~~s~~K~~g~~~g-- 214 (359)
++ +.++||||.+++.+++++|+++|++||+++|+|++|....... ...+...+. ....+++.|+||.+|.++.
T Consensus 200 ~i-~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri 278 (420)
T 4f4e_A 200 LH-ACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERV 278 (420)
T ss_dssp EE-CSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCE
T ss_pred Ee-CCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCc
Confidence 77 6677799999999999999999999999999999975433321 112222332 1233555699999986432
Q ss_pred eEEe---cCHHHHHHHH-HHHHh---hCCCcchhHHHHHHHHHHH---------HHhHHHHhhhHHHHHHHHHHHHhcC-
Q 018243 215 SVIV---GSKEFIKKAR-RLRKT---LGGGMRQVGVLCAAALVAL---------QENVLVMLDGDHKKAKLLAEGLNQL- 277 (359)
Q Consensus 215 g~~~---~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~l---------~~~~~~~~~~~~~~~~~l~~~l~~~- 277 (359)
||++ .++++++.+. ..... ...+. +...+.++...+ +...++.++++.++++++.+.|+++
T Consensus 279 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 356 (420)
T 4f4e_A 279 GALSIITDSKDEAARVLSQLKRVIRTNYSNP--PTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAG 356 (420)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHHTTTSSC--CSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEcCCHHHHHHHHHHHHHHHhcccCCC--CHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6654 3566655432 22221 11222 222222222222 2334557778889999999999987
Q ss_pred --CCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 278 --KGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 278 --~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
+++.+.. +..+.++|+.++. +.+.+.|.++||.+.+++ |++++ ..+++++++++++|++++
T Consensus 357 ~~~~~~~~~-~~~g~~~~~~~~~------~~~~~~l~~~gI~v~~~~----Ris~~-~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 357 IERDFSFIN-AQRGMFSYSGLTS------AQVDRLREEFGIYAVSTG----RICVA-ALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp CSSCCTHHH-HSCSSEEECCCCH------HHHHHHHHHHCEECCTTS----EEEGG-GCCTTTHHHHHHHHHHHH
T ss_pred CCCCceeEC-CCccEEEEeCCCH------HHHHHHHHhCCEEecCCC----eEEEe-cCCHHHHHHHHHHHHHHh
Confidence 3666543 3467777766542 356666789999998865 99986 458888999999999876
No 127
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=100.00 E-value=3.3e-30 Score=231.86 Aligned_cols=322 Identities=19% Similarity=0.199 Sum_probs=233.1
Q ss_pred cccCCCCCCh-HHHHHHHHHcCCCCCCccCC-ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEec
Q 018243 7 DLRSDTVTKP-TEAMRAAMASAEVDDDVLMH-DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILG 84 (359)
Q Consensus 7 d~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~-~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~ 84 (359)
+|..+.+..+ ++.+.+++.+.... ..|+. .+...++++.++++++.+..++++||++|+..++.++. +|++|+++
T Consensus 20 ~l~~~~p~~~~p~~~~~a~~~~~~~-~~y~~~~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~l~~l~--~gd~Vlv~ 96 (424)
T 2po3_A 20 PLLVGRPNRIDRARLYERLDRALDS-QWLSNGGPLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAAG--LTGEVIMP 96 (424)
T ss_dssp CEETTCCCCCCHHHHHHHHHHHHHH-TCCSSSCHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHHT--CCSEEEEE
T ss_pred cccccCCCCCChHHHHHHHHHHHhc-CCcccCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcC--CCCEEEEC
Confidence 4554444333 36777777664422 24666 78899999999999999888999999999999999875 68999999
Q ss_pred CCCcceeeccccccccCCccceeeecCC-CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHH
Q 018243 85 DNSHIHIYENGGISTIGGVHPRTVKNNQ-DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVG 163 (359)
Q Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~ 163 (359)
+++|.+... .+...|++++.++.+. ++.+|+++|++.++ +++++|++++ |||... ++++|.
T Consensus 97 ~~~~~~~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~--------~~~~~v~~~~----~tG~~~---~l~~i~ 158 (424)
T 2po3_A 97 SMTFAATPH---ALRWIGLTPVFADIDPDTGNLDPDQVAAAVT--------PRTSAVVGVH----LWGRPC---AADQLR 158 (424)
T ss_dssp SSSCTHHHH---HHHHTTCEEEEECBCTTTSSBCHHHHGGGCC--------TTEEEEEEEC----GGGCCC---CHHHHH
T ss_pred CCccHHHHH---HHHHcCCEEEEEecCCCcCCcCHHHHHHhhC--------cCCcEEEEEC----CCCCcC---CHHHHH
Confidence 999888664 3677899999998765 67789999999988 6788988843 788864 589999
Q ss_pred HHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEecc--ccCCCceeeEEecC-HHHHHHHHHHHHhhC-----
Q 018243 164 EIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLS--KGLGAPVGSVIVGS-KEFIKKARRLRKTLG----- 235 (359)
Q Consensus 164 ~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~--K~~g~~~gg~~~~~-~~~~~~~~~~~~~~~----- 235 (359)
++|+++|+++|+|++|++|.. +.+.+.. ...|+++.|+| |+++++.+|+++.+ +++.+.++.......
T Consensus 159 ~la~~~~~~li~Dea~~~g~~-~~~~~~~---~~~di~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~ 234 (424)
T 2po3_A 159 KVADEHGLRLYFDAAHALGCA-VDGRPAG---SLGDAEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNFGFDLPGG 234 (424)
T ss_dssp HHHHHTTCEEEEECTTCTTCE-ETTEETT---SSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTTTCTTC
T ss_pred HHHHHcCCEEEEECccccCCe-ECCeecc---cccCEEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhcCcccccc
Confidence 999999999999999875443 2333222 23577777877 88876556888887 888888776554311
Q ss_pred -----CCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccc----eEEEEEeccc-hHHHHH
Q 018243 236 -----GGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVET----NIVYFEITED-SKLYAA 305 (359)
Q Consensus 236 -----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~----~~~~~~~~~~-~~~~~~ 305 (359)
.+.......+++++..++.. +...++..++++++.+.|+++|++.+...+..+ .++++.++.. .+.+..
T Consensus 235 ~~~~g~~~~~~~~~aa~~l~~~~~~-~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 313 (424)
T 2po3_A 235 SPAGGTNAKMSEAAAAMGLTSLDAF-PEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGIHRD 313 (424)
T ss_dssp CTTCCCBCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSSCHH
T ss_pred ccccCcCCCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCccchhhHH
Confidence 11122344444445444443 336677788889999999988888875422222 2344666520 023677
Q ss_pred HHHHHHHhcCceeccCCC-------------------------cEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 306 CLLKKLEEHGVLVMPESS-------------------------TRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 306 ~~~~~l~~~gi~~~~~~~-------------------------~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
++.+.|.++||.+.+... ..+|++++..++++++++++++|++++++..
T Consensus 314 ~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~~~ 387 (424)
T 2po3_A 314 LVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCATRGR 387 (424)
T ss_dssp HHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhhhH
Confidence 899999999999865211 1288887789999999999999999987654
No 128
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.9e-30 Score=228.56 Aligned_cols=311 Identities=19% Similarity=0.176 Sum_probs=225.1
Q ss_pred ccCCCCCChH-HHHHHHHHcCCCCCCccC--CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEec
Q 018243 8 LRSDTVTKPT-EAMRAAMASAEVDDDVLM--HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILG 84 (359)
Q Consensus 8 ~~~~~~~~~~-~~~~~a~~~~~~~~~~~~--~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~ 84 (359)
+.+.++..+. +...+.+.. ......|+ ..+...++++.+++++|.+.+++++||++|+..++.+++ ++||+|+++
T Consensus 49 ~~s~t~~~~~~~~~~~~~~~-~~~~~~y~r~~~p~~~~l~~~la~~~g~~~~~~~~sG~~Ai~~al~~l~-~~Gd~Vi~~ 126 (414)
T 3ndn_A 49 YLTSGYVYGSAAVAEKSFAG-ELDHYVYSRYGNPTVSVFEERLRLIEGAPAAFATASGMAAVFTSLGALL-GAGDRLVAA 126 (414)
T ss_dssp CCCSBBCCSSHHHHHHHHTT-SSCCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTC-CTTCEEEEE
T ss_pred ccCCceecCChHHHHHHHhC-CcCCcCcCCCCChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEc
Confidence 4444555555 344444332 22333343 367889999999999999888999999999999998887 599999999
Q ss_pred CCCcceeeccc-cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHH
Q 018243 85 DNSHIHIYENG-GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVG 163 (359)
Q Consensus 85 ~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~ 163 (359)
.++|.+.+... ......|.+++.++.+ |+++|++.++ +++++|++++++ ||||.+.+ +++|+
T Consensus 127 ~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~ai~--------~~t~~v~le~p~-NptG~~~~---l~~i~ 189 (414)
T 3ndn_A 127 RSLFGSCFVVCSEILPRWGVQTVFVDGD-----DLSQWERALS--------VPTQAVFFETPS-NPMQSLVD---IAAVT 189 (414)
T ss_dssp SCCCHHHHHHHHTHHHHTTCEEEEECTT-----CHHHHHHHTS--------SCCSEEEEESSC-TTTCCCCC---HHHHH
T ss_pred CCccchHHHHHHHHHHHcCcEEEEeCCC-----CHHHHHHhcC--------CCCeEEEEECCC-CCCCcccc---HHHHH
Confidence 99988865410 1123478899888765 8999999998 789999996655 59999876 89999
Q ss_pred HHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCce---eeEEecCHHHHH-HHHHHHHhhCCCcc
Q 018243 164 EIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV---GSVIVGSKEFIK-KARRLRKTLGGGMR 239 (359)
Q Consensus 164 ~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~---gg~~~~~~~~~~-~~~~~~~~~~~~~~ 239 (359)
++|+++|+++|+|++|+.+.. .. ++..++|+++.|+||++++++ +|+++++++.+. .++......+.+.
T Consensus 190 ~la~~~g~~livDe~~~~~~~---~~---~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~- 262 (414)
T 3ndn_A 190 ELAHAAGAKVVLDNVFATPLL---QQ---GFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAM- 262 (414)
T ss_dssp HHHHHTTCEEEEECTTTHHHH---CC---CGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCC-
T ss_pred HHHHHcCCEEEEECCCccccc---CC---chhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCC-
Confidence 999999999999999753322 11 223368999999999998744 688989888776 6665556666655
Q ss_pred hhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceE-ecCC---------------ccceEEEEEeccch---
Q 018243 240 QVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRV-DVDA---------------VETNIVYFEITEDS--- 300 (359)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~-~~~~---------------~~~~~~~~~~~~~~--- 300 (359)
++..++++...++.... ++++..++++++.+.|++.|++.. ..+. ..+.++++.++...
T Consensus 263 -~~~~a~~~~~~l~~l~~-r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~ 340 (414)
T 3ndn_A 263 -SAFNAWVLLKGLETLAI-RVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVA 340 (414)
T ss_dssp -CHHHHHHHHHHGGGHHH-HHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGH
T ss_pred -CHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCcccc
Confidence 44555555555555444 777888999999999999887753 2221 24678999997520
Q ss_pred HHHHHHHHHHHHhcCceeccC---------------------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 301 KLYAACLLKKLEEHGVLVMPE---------------------------SSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 301 ~~~~~~~~~~l~~~gi~~~~~---------------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
......|.+.|...++.+..| .++.+|+++. .|+.+++++.|++++
T Consensus 341 ~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG----~e~~~dli~dl~~al 413 (414)
T 3ndn_A 341 KQRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVG----LEDTDDLIADIDRAL 413 (414)
T ss_dssp HHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECC----SSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCccceEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeC----cCCHHHHHHHHHHhh
Confidence 346778888887766655333 2457999985 367777888877765
No 129
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.98 E-value=9.3e-31 Score=235.80 Aligned_cols=334 Identities=16% Similarity=0.163 Sum_probs=228.3
Q ss_pred ccccccCCC---C-CChHHHHHHHHHcCCCCCC----ccCCChHHHHHHHHHHHHh-C-C-CCeEEcCCchHHHHHHHH-
Q 018243 4 RTVDLRSDT---V-TKPTEAMRAAMASAEVDDD----VLMHDPTAFRLETEMAKVM-G-K-EAGLFVPSGTMGNLISVL- 71 (359)
Q Consensus 4 ~~id~~~~~---~-~~~~~~~~~a~~~~~~~~~----~~~~~~~~~~l~~~la~~~-~-~-~~~~~~~~gt~a~~~~l~- 71 (359)
.++||.++. + ..++|.+.+++.+...... .|...+...++++.+++++ + . +..++++||++|+..++.
T Consensus 42 ~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~ 121 (426)
T 1sff_A 42 EYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKI 121 (426)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHH
T ss_pred EEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHH
Confidence 468887764 2 2366889999887654321 3455788899999999999 5 3 345788889999999988
Q ss_pred --HhhhhcCCeEEecCCCcceeeccccccccCCcc-------------ceeeecCC-----CCCCCHHHHHHHhcCCCCC
Q 018243 72 --VHCETRGSEVILGDNSHIHIYENGGISTIGGVH-------------PRTVKNNQ-----DGTMDIDLIEAAIRDPKGE 131 (359)
Q Consensus 72 --~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~-------------~~~v~~~~-----~~~~~~~~l~~~l~~~~~~ 131 (359)
.+. +++ +|++.+|+|..... ......|.+ ++.++.+. ++.+|+++|++.+++..
T Consensus 122 a~~~~-~~~-~vi~~~p~y~~~~~--~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~-- 195 (426)
T 1sff_A 122 ARAAT-KRS-GTIAFSGAYHGRTH--YTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA-- 195 (426)
T ss_dssp HHHHH-TCC-EEEEETTCCCCSSH--HHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC--
T ss_pred HHHhh-CCC-eEEEECCCcCCCch--HhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhcc--
Confidence 444 355 89998888765443 113333322 44454432 23368999999887310
Q ss_pred ccCCceeEEEEeccccCCCc-eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc--hhHhhhcCccEEEEecccc
Q 018243 132 IVYPTTRLICLENTHANCGG-RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV--PVRRLVQAADSASVCLSKG 208 (359)
Q Consensus 132 ~~~~~~~~v~i~~~~~~ptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~~d~~~~s~~K~ 208 (359)
+.+++++|++++.++| || ..++.+++++|.++|++||++||+||+|+ + +...+. ........+|++ |+||+
T Consensus 196 -~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~-~~~~g~~~~~~~~~~~~di~--s~sK~ 269 (426)
T 1sff_A 196 -APEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQS-G-AGRTGTLFAMEQMGVAPDLT--TFAKS 269 (426)
T ss_dssp -CGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTT-T-TTTTSSSSGGGGTTSCCSEE--EECGG
T ss_pred -CCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhh-c-cCcccchhhhhhcCCCCCEE--EEccc
Confidence 0036788888777787 99 78889999999999999999999999986 2 222222 111121235544 78899
Q ss_pred CCCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhc----CCCceE
Q 018243 209 LGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQ----LKGLRV 282 (359)
Q Consensus 209 ~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~----~~g~~~ 282 (359)
++++.. |++++++++++.+... ....++..++..++++..+++...+ ...++..++++++++.|++ ++.+..
T Consensus 270 ~~~GlriG~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 347 (426)
T 1sff_A 270 IAGGFPLAGVTGRAEVMDAVAPG--GLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGD 347 (426)
T ss_dssp GGTSSCCEEEEEEHHHHTTSCTT--SBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred ccCCCceEEEEEcHHHHhhhccC--CcCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 985222 8888888887765421 2233444456666666666653322 2455666777777777765 333332
Q ss_pred ecCCccceEEEEEecc------chHHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 283 DVDAVETNIVYFEITE------DSKLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 283 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
. +..++++|+.+.. +.+.+..++.+.|.++||.+.+++ ..++|++++..++++++++++++|+++++++
T Consensus 348 ~--~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 348 V--RGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp E--EEETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred E--EEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCCCCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 2 2358899999853 123567889999988999998876 5789999988899999999999999998775
No 130
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.98 E-value=1.6e-31 Score=235.84 Aligned_cols=315 Identities=20% Similarity=0.238 Sum_probs=230.4
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEe
Q 018243 4 RTVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVIL 83 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~ 83 (359)
.++|+...... ..|++.+++.+.... ..|..++...++++.+++++|.+..++++||++|+..++..+..++|++|++
T Consensus 3 ~~~~~~~~~~~-~~~~v~~a~~~~~~~-~~~~~~~~~~~l~~~la~~~~~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~ 80 (367)
T 3nyt_A 3 EFIDLKNQQAR-IKDKIDAGIQRVLRH-GQYILGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVIT 80 (367)
T ss_dssp CSSCCHHHHHH-HHHHHHHHHHHHHHH-CCCSSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEE
T ss_pred Ccccccccccc-cCHHHHHHHHHHHhc-CCccCChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhCCCCcCEEEE
Confidence 34555543322 236777777664322 2455778999999999999999988999999999999999993369999999
Q ss_pred cCCCcceeeccccccccCCccceeeecCCC-CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHH
Q 018243 84 GDNSHIHIYENGGISTIGGVHPRTVKNNQD-GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSV 162 (359)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i 162 (359)
+.++|.+... .+...|++++.++.+.+ +.+|++++++.++ +++++|++ +||+|...+ +++|
T Consensus 81 ~~~~~~~~~~---~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~--------~~~~~v~~----~~~~G~~~~---~~~i 142 (367)
T 3nyt_A 81 PGFTYVATAE---TVALLGAKPVYVDIDPRTYNLDPQLLEAAIT--------PRTKAIIP----VSLYGQCAD---FDAI 142 (367)
T ss_dssp ESSSCTHHHH---HHHHTTCEEEEECBCTTTCSBCGGGTGGGCC--------TTEEEECC----BCGGGCCCC---HHHH
T ss_pred CCCccHHHHH---HHHHcCCEEEEEecCCccCCcCHHHHHHhcC--------cCCcEEEe----eCCccChhh---HHHH
Confidence 9999988765 26777999999987755 8899999999997 78888873 348897655 8999
Q ss_pred HHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEec--cccCCC-ceeeEEec-CHHHHHHHHHHHHhh----
Q 018243 163 GEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCL--SKGLGA-PVGSVIVG-SKEFIKKARRLRKTL---- 234 (359)
Q Consensus 163 ~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~--~K~~g~-~~gg~~~~-~~~~~~~~~~~~~~~---- 234 (359)
.++|+++|+++|+|++|++|... .+.....+ .|++++|+ +|++++ +.||+++. ++++.+.++......
T Consensus 143 ~~la~~~~~~li~D~a~~~g~~~-~~~~~~~~---~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~~g~~~~ 218 (367)
T 3nyt_A 143 NAIASKYGIPVIEDAAQSFGASY-KGKRSCNL---STVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIARHGQDRR 218 (367)
T ss_dssp HHHHHHTTCCBEEECTTTTTCEE-TTEETTSS---SSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEET
T ss_pred HHHHHHcCCEEEEECccccCCeE-CCeeccCC---CCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHhcCCCcC
Confidence 99999999999999998776542 23322222 28888885 899987 45677776 688888877654421
Q ss_pred ------CCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCcc--ceE--EEEEeccchHHHH
Q 018243 235 ------GGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVE--TNI--VYFEITEDSKLYA 304 (359)
Q Consensus 235 ------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~--~~~--~~~~~~~~~~~~~ 304 (359)
+.+...+...++++...++...+ ..++..++++++.+.|+++ ++.+...+.. ..+ +.+.++ +.
T Consensus 219 ~~~~~~g~~~~~~~~~aa~~~~~l~~~~~-~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~ 291 (367)
T 3nyt_A 219 YHHIRVGVNSRLDTLQAAILLPKLEIFEE-EIALRQKVAAEYDLSLKQV-GIGTPFIEVNNISVYAQYTVRMD-----NR 291 (367)
T ss_dssp TEECSCCCBCCCCHHHHHHHHHHHHTHHH-HHHHHHHHHHHHHHHHHHT-TCCCCCCCTTEECCCSSEEEECS-----SH
T ss_pred ceeeccCcCCCccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhccC-CeeccCCCCCCceeeEEEEEEeC-----CH
Confidence 23455566777777766665433 6677888889999999988 5554222111 111 223332 56
Q ss_pred HHHHHHHHhcCceeccCC------------------------CcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018243 305 ACLLKKLEEHGVLVMPES------------------------STRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 305 ~~~~~~l~~~gi~~~~~~------------------------~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
+++.+.|.++||.+.+.. ...+|+++++.++++|++++++.|++.
T Consensus 292 ~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 292 ESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp HHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 789999999999874332 135999999999999999999999754
No 131
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.98 E-value=3.7e-30 Score=229.09 Aligned_cols=313 Identities=15% Similarity=0.097 Sum_probs=224.1
Q ss_pred cCCCCCChHH-HHHHHHHcCCCCCCccC--CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecC
Q 018243 9 RSDTVTKPTE-AMRAAMASAEVDDDVLM--HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGD 85 (359)
Q Consensus 9 ~~~~~~~~~~-~~~~a~~~~~~~~~~~~--~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~ 85 (359)
.++++..|.. ...+.+.........|+ ..+...++|+.+++++|.+.+++++||++|+..++.+++ ++||+|+++.
T Consensus 50 ~s~t~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~ssGt~Ai~~al~~l~-~~Gd~Vi~~~ 128 (415)
T 2fq6_A 50 RASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVLFPCGAAAVANSILAFI-EQGDHVLMTN 128 (415)
T ss_dssp CCSCBCCSSHHHHHHHHHTTTTTSCCCTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTC-CTTCEEEEET
T ss_pred cccceeeCCHHHHHHhhccccCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHh-CCCCEEEEeC
Confidence 3456666664 44444433212334455 467889999999999999888999999999999999887 5999999999
Q ss_pred CCcceeeccc-cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHH
Q 018243 86 NSHIHIYENG-GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGE 164 (359)
Q Consensus 86 ~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~ 164 (359)
+.|.+.+... ...+..|+++..++.+ |++++++.++ +++++|++++++ ||||.+.+ +++|.+
T Consensus 129 ~~y~~~~~~~~~~l~~~G~~v~~v~~~-----d~~~le~ai~--------~~tklV~~e~~~-NptG~v~d---l~~I~~ 191 (415)
T 2fq6_A 129 TAYEPSQDFCSKILSKLGVTTSWFDPL-----IGADIVKHLQ--------PNTKIVFLESPG-SITMEVHD---VPAIVA 191 (415)
T ss_dssp TSCHHHHHHHHHTGGGGTCEEEEECTT-----CGGGGGGGCC--------TTEEEEEEESSC-TTTCCCCC---HHHHHH
T ss_pred CCchHHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhhc--------cCCcEEEEECCC-CCCCEeec---HHHHHH
Confidence 9998776411 1134568888888654 8899999998 789999996655 59999987 899999
Q ss_pred HHHH--cCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCce---eeEEecCHHHHHHHHHHHHhhCCCcc
Q 018243 165 IAKK--HGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV---GSVIVGSKEFIKKARRLRKTLGGGMR 239 (359)
Q Consensus 165 ~~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~---gg~~~~~~~~~~~~~~~~~~~~~~~~ 239 (359)
+|++ +|+++|+|++|+.+.. ..+ +..++|+++.|+||++|++. +|++++++++++.++......+...
T Consensus 192 la~~~~~g~~livD~a~a~~~~---~~p---~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G~~~- 264 (415)
T 2fq6_A 192 AVRSVVPDAIIMIDNTWAAGVL---FKA---LDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMV- 264 (415)
T ss_dssp HHHHHCTTCEEEEECTTTTTTS---SCG---GGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCC-
T ss_pred HHHhhcCCCEEEEECCCccccc---CCc---cccCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcCCCC-
Confidence 9999 9999999999754321 122 22378999999999998764 5888888888888776665555544
Q ss_pred hhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCce-EecCC---------------ccceEEEEEeccc-hHH
Q 018243 240 QVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLR-VDVDA---------------VETNIVYFEITED-SKL 302 (359)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~~---------------~~~~~~~~~~~~~-~~~ 302 (359)
++..++.+..+++.... ++++..+++..+.+.|++.|.+. +..+. ..+.+++|.++.. ...
T Consensus 265 -~~~~a~~~~~~l~~l~~-r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~ 342 (415)
T 2fq6_A 265 -DADTAYITSRGLRTLGV-RLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNE 342 (415)
T ss_dssp -CHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHH
T ss_pred -CHHHHHHHHhhhhHHHH-HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHH
Confidence 34444445555555443 67778888999999999876654 22221 2467888998751 023
Q ss_pred HHHHHHHHHHhcCceec------------c-----------C--CCcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018243 303 YAACLLKKLEEHGVLVM------------P-----------E--SSTRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~~------------~-----------~--~~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
+...+.+.|...++.+. | . ..+.+|++++...++++++.+.++|++
T Consensus 343 ~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 343 ELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp HHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 56667666654333321 1 1 236799999988888888888887764
No 132
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.98 E-value=2e-30 Score=232.77 Aligned_cols=329 Identities=16% Similarity=0.084 Sum_probs=224.8
Q ss_pred ccccccCCC---CCCh--HHHHHHHHHcCCCCCCcc----CCChHHHHHHHHHHHHhCCC---CeEEcCCchHHHHHHHH
Q 018243 4 RTVDLRSDT---VTKP--TEAMRAAMASAEVDDDVL----MHDPTAFRLETEMAKVMGKE---AGLFVPSGTMGNLISVL 71 (359)
Q Consensus 4 ~~id~~~~~---~~~~--~~~~~~a~~~~~~~~~~~----~~~~~~~~l~~~la~~~~~~---~~~~~~~gt~a~~~~l~ 71 (359)
.++||.++. +.++ +|.+.+++.+.......+ ...+...++++.+++++|.+ ..++++||++|+..++.
T Consensus 43 ~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ai~ 122 (419)
T 2eo5_A 43 KYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAHAAANDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIK 122 (419)
T ss_dssp EEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCCCSCSCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHH
T ss_pred EEEEccCChhhhccCCCCCHHHHHHHHHHHhhCccccccccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHHHHH
Confidence 468998764 3333 588888887754332212 23566789999999999975 35788889999999999
Q ss_pred HhhhhcCCeEEecCCCcceeecccccccc-------------CCccceeeecCCCCC----------------CCHHHHH
Q 018243 72 VHCETRGSEVILGDNSHIHIYENGGISTI-------------GGVHPRTVKNNQDGT----------------MDIDLIE 122 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~-------------~g~~~~~v~~~~~~~----------------~~~~~l~ 122 (359)
.+...++++|++.+|+|.+... ..... ....++.++.+.++. +|+++|+
T Consensus 123 ~~~~~~~~~vi~~~p~yh~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~ 200 (419)
T 2eo5_A 123 VVKNTGRKYIIAFLGGFHGRTF--GSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIE 200 (419)
T ss_dssp HHHTTSCCEEEEETTCCCCSSH--HHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHH
T ss_pred HHHHhhCCcEEEECCCcCCCCH--hhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHH
Confidence 8763248899999988754332 11111 112455665544332 3578888
Q ss_pred -HHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc--hhHhhhcCc
Q 018243 123 -AAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV--PVRRLVQAA 198 (359)
Q Consensus 123 -~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~~ 198 (359)
+.+++.. ..+++++|++ ++.+||||. +.+.+++++|.++|++||+++|+||+|..... .+. .........
T Consensus 201 ~~~i~~~~---~~~~~~~vi~-~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~--~g~~~~~~~~~~~~ 274 (419)
T 2eo5_A 201 DYIFVNLV---PPEEVAGIFF-EPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGR--TGKLFAIENFNTVP 274 (419)
T ss_dssp HTHHHHTC---CGGGEEEEEE-CSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTT--TSSSSGGGGGTCCC
T ss_pred HHHHhhcc---CCCCEEEEEE-eCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCcc--CcchhhHHhcCCCC
Confidence 8886310 0025667777 556668996 66788899999999999999999999862211 121 112122245
Q ss_pred cEEEEeccccCCCc-ee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhc
Q 018243 199 DSASVCLSKGLGAP-VG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQ 276 (359)
Q Consensus 199 d~~~~s~~K~~g~~-~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~ 276 (359)
|++ |+||.++++ .+ |+++++++++ .+ . ...+.++..+++.++++..+++...+ .+++..+++++|.+.|++
T Consensus 275 d~~--t~sK~~~~G~~riG~~~~~~~~~-~~-~--~~~~~t~~~n~~~~~aa~aal~~~~~-~~~~~~~~~~~l~~~L~~ 347 (419)
T 2eo5_A 275 DVI--TLAKALGGGIMPIGATIFRKDLD-FK-P--GMHSNTFGGNALACAIGSKVIDIVKD-LLPHVNEIGKIFAEELQG 347 (419)
T ss_dssp SEE--EECGGGGTTTSCCEEEEEEGGGC-CC---------CCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTT
T ss_pred CEE--EecccccCCccceEEEEEchHhh-cC-C--cccCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 654 678999754 34 7788887776 54 2 12333455566777777777766544 677788899999999987
Q ss_pred CCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 277 LKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 277 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+ +... +..++++++.+.. ...... +.+.|.++||.+.+++..++||+++...+++++++++++|+++++++
T Consensus 348 ~--~~~~--~~~g~~~~i~~~~-~~~~~~-~~~~l~~~Gv~v~~~~~~~lRis~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 348 L--ADDV--RGIGLAWGLEYNE-KKVRDR-IIGESFKRGLLLLPAGRSAIRVIPPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp S--SSEE--EEETTEEEEECSC-HHHHHH-HHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred h--hhhe--EeeeEEEEEEEec-CccHHH-HHHHHHHCCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 6 3222 3467888888842 112455 88999999999998877899999988899999999999999988764
No 133
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.98 E-value=1e-30 Score=234.47 Aligned_cols=327 Identities=13% Similarity=0.065 Sum_probs=225.7
Q ss_pred cccccccCCCC------CChHHHHHHHHHcCC--C-CCCccCCChHHHHHHHHHHHHh-CC-------CCeEE--cCCch
Q 018243 3 TRTVDLRSDTV------TKPTEAMRAAMASAE--V-DDDVLMHDPTAFRLETEMAKVM-GK-------EAGLF--VPSGT 63 (359)
Q Consensus 3 ~~~id~~~~~~------~~~~~~~~~a~~~~~--~-~~~~~~~~~~~~~l~~~la~~~-~~-------~~~~~--~~~gt 63 (359)
...|||..+.+ ..|.|.+.+++.+.. . ....|+..++..++++.+++++ +. +..++ ++||+
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~ 109 (412)
T 1ajs_A 30 PRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGT 109 (412)
T ss_dssp TTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHH
T ss_pred CCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcH
Confidence 35789999874 244588888887754 1 2334666677899999999999 43 34466 88888
Q ss_pred HHHHHHHH--HhhhhcC-----CeEEecCCCcceeeccccccccCCcc-ceeeecC--CCCCCCHHHHHHHhcCCCCCcc
Q 018243 64 MGNLISVL--VHCETRG-----SEVILGDNSHIHIYENGGISTIGGVH-PRTVKNN--QDGTMDIDLIEAAIRDPKGEIV 133 (359)
Q Consensus 64 ~a~~~~l~--~~~~~~g-----~~vl~~~~~~~~~~~~~~~~~~~g~~-~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~ 133 (359)
+|+..++. .++ .+| |+|+++.|+|.+... .+...|.+ ++.++.. +++.+|++++++.+++.
T Consensus 110 ~a~~~~~~~~~~~-~~g~~~~~d~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~----- 180 (412)
T 1ajs_A 110 GALRIGAEFLARW-YNGTNNKDTPVYVSSPTWENHNG---VFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENA----- 180 (412)
T ss_dssp HHHHHHHHHHHHH-SSSSSCCCSCEEEEESCCTHHHH---HHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHS-----
T ss_pred HHHHHHHHHHHHh-CcCcCCCCCeEEEcCCCcHHHHH---HHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhC-----
Confidence 99998864 344 488 999999999887553 36677888 8888763 56778999999998731
Q ss_pred CCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh---cCchhHhhhcCcc--EEEEecccc
Q 018243 134 YPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA---LGVPVRRLVQAAD--SASVCLSKG 208 (359)
Q Consensus 134 ~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~---~~~~~~~~~~~~d--~~~~s~~K~ 208 (359)
.++++++++ +.++||||.+++.+++++|+++|++||+++|+||+|....... ...+...+....| +++.|+||.
T Consensus 181 ~~~~~~v~~-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 259 (412)
T 1ajs_A 181 PEFSIFVLH-ACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKN 259 (412)
T ss_dssp CTTCEEEEE-SSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTT
T ss_pred CCCcEEEEE-CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccc
Confidence 035667767 5566799999999999999999999999999999964332210 1112333322233 556699999
Q ss_pred CCCce-e-eEEec---CHHHHH----HHHHHHHhhCCCcchhHHHHHHHHHHHH---------HhHHHHhhhHHHHHHHH
Q 018243 209 LGAPV-G-SVIVG---SKEFIK----KARRLRKTLGGGMRQVGVLCAAALVALQ---------ENVLVMLDGDHKKAKLL 270 (359)
Q Consensus 209 ~g~~~-g-g~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~---------~~~~~~~~~~~~~~~~l 270 (359)
+|.++ . |++++ ++++.+ .+.........+. +...+.++..+++ ...++.++++.++++++
T Consensus 260 ~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 337 (412)
T 1ajs_A 260 FGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNP--PAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSEL 337 (412)
T ss_dssp SCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSC--CSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCC--ChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 98633 2 77877 777443 3333222211111 3333444444443 24455677788899999
Q ss_pred HHHHhcCC---CceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHH
Q 018243 271 AEGLNQLK---GLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 271 ~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
.+.|+++. ++++.. +..+.++|+.++ ...+...|.++||.+.++ +|++++ ..+++++++++++|+
T Consensus 338 ~~~L~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~l~~~gv~v~~~----~Ris~~-~~~~~~i~~~~~~l~ 405 (412)
T 1ajs_A 338 RARLEALKTPGTWNHIT-DQIGMFSFTGLN------PKQVEYLINQKHIYLLPS----GRINMC-GLTTKNLDYVATSIH 405 (412)
T ss_dssp HHHHHHTTCSSCCHHHH-HCCSSEEECCCC------HHHHHHHHHTTCEECCTT----SEEEGG-GCCTTTHHHHHHHHH
T ss_pred HHHHHhhCCCCCeeEEc-CCCceEEEeCCC------HHHHHHHHHhCCEEecCC----cEEEee-eCCHHHHHHHHHHHH
Confidence 99999873 366533 346677776543 234555568899999874 599986 358999999999999
Q ss_pred HHHHHH
Q 018243 348 KIYAGV 353 (359)
Q Consensus 348 ~~~~~~ 353 (359)
++++++
T Consensus 406 ~~l~~~ 411 (412)
T 1ajs_A 406 EAVTKI 411 (412)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 988754
No 134
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.98 E-value=1.2e-30 Score=232.97 Aligned_cols=326 Identities=15% Similarity=0.064 Sum_probs=221.9
Q ss_pred cccccccCCC---CCC---hHHHHHHHHHc-CCCC--CCccCCChHHHHHHHHHHHHhCC-------C---CeEEcCCch
Q 018243 3 TRTVDLRSDT---VTK---PTEAMRAAMAS-AEVD--DDVLMHDPTAFRLETEMAKVMGK-------E---AGLFVPSGT 63 (359)
Q Consensus 3 ~~~id~~~~~---~~~---~~~~~~~a~~~-~~~~--~~~~~~~~~~~~l~~~la~~~~~-------~---~~~~~~~gt 63 (359)
+..|||..+. +.. +.+.+.+++.+ .... ...|....+..++++.++++++. + ..++++||+
T Consensus 26 ~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~ 105 (397)
T 3fsl_A 26 SDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGS 105 (397)
T ss_dssp SCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHH
T ss_pred CCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCCcH
Confidence 4578998883 222 22789998887 5543 33566667789999999999853 2 336777788
Q ss_pred HHHHHHHH--HhhhhcCCeEEecCCCcceeeccccccccCCccceeeec--CCCCCCCHHHHHHHhcCCCCCccCCceeE
Q 018243 64 MGNLISVL--VHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN--NQDGTMDIDLIEAAIRDPKGEIVYPTTRL 139 (359)
Q Consensus 64 ~a~~~~l~--~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 139 (359)
+++..++. .++ ++||+|+++.|+|.+... .++..|.+++.++. ++++.+|++++++.+++.. +++++
T Consensus 106 ~a~~~~~~~~~~~-~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-----~~~~~ 176 (397)
T 3fsl_A 106 GALKVGADFLKRY-FPESGVWVSDPTWENHVA---IFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQ-----AGSIV 176 (397)
T ss_dssp HHHHHHHHHHHHH-CTTCCEEEESSCCHHHHH---HHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCC-----TTCEE
T ss_pred HHHHHHHHHHHhc-CCCCeEEEeCCCchhHHH---HHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCC-----CCCEE
Confidence 88888853 444 589999999999887553 36778889999876 4578899999999998521 35667
Q ss_pred EEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh--cCchhHhhhc-Ccc-EEEEeccccCCCce-e
Q 018243 140 ICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA--LGVPVRRLVQ-AAD-SASVCLSKGLGAPV-G 214 (359)
Q Consensus 140 v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~--~~~~~~~~~~-~~d-~~~~s~~K~~g~~~-g 214 (359)
+++ +.++||||.+++.+++++|+++|++||+++|+|++|..+.... ...+...+.. ..+ +++.|+||.+|.++ +
T Consensus 177 v~~-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~r 255 (397)
T 3fsl_A 177 LLH-PCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGER 255 (397)
T ss_dssp EEC-SSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGC
T ss_pred EEe-CCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCC
Confidence 776 5667799999999999999999999999999999975544321 1123333321 222 45559999998543 2
Q ss_pred -eEEe---cCHHHHHHHH-HHHHhh-CCCcchhHHHHHHHHHHH---------HHhHHHHhhhHHHHHHHHHHHHhcCC-
Q 018243 215 -SVIV---GSKEFIKKAR-RLRKTL-GGGMRQVGVLCAAALVAL---------QENVLVMLDGDHKKAKLLAEGLNQLK- 278 (359)
Q Consensus 215 -g~~~---~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~l---------~~~~~~~~~~~~~~~~~l~~~l~~~~- 278 (359)
||++ .+++.++.+. ...... ......+...+.++...+ ....++.++++.++++++.+.|++++
T Consensus 256 iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 335 (397)
T 3fsl_A 256 VGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMP 335 (397)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred eeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 6664 3566665443 222211 111111222222222222 33445567778889999999999874
Q ss_pred --CceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 279 --GLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 279 --g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
++.+.. +..+.++|+.++. +.+.+.|.++||.+.+++ |++++ ..+++++++++++|++++
T Consensus 336 ~~~~~~~~-~~~~~~~~~~~~~------~~~~~~l~~~gi~v~~g~----Ris~~-~~~~~~i~~~~~~l~~~l 397 (397)
T 3fsl_A 336 ERNFDYLL-NQRGMFSYTGLSA------AQVDRLREEFGVYLIASG----RMCVA-GLNTANVQRVAKAFAAVM 397 (397)
T ss_dssp TSCCTHHH-HCCSSEEECCCCH------HHHHHHHHTTCEECCTTC----EEEGG-GCCTTTHHHHHHHHHHHC
T ss_pred CCCceeec-CCceEEEecCCCH------HHHHHHHHhCCEEECCCC----eEEEE-ecCHhhHHHHHHHHHhhC
Confidence 566533 3467777776643 346667789999999876 99986 457788999999998753
No 135
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.98 E-value=2e-29 Score=224.63 Aligned_cols=311 Identities=23% Similarity=0.214 Sum_probs=216.1
Q ss_pred ccccCCCCCChHHHHHHHHH--cCCCCCCccC--CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeE
Q 018243 6 VDLRSDTVTKPTEAMRAAMA--SAEVDDDVLM--HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEV 81 (359)
Q Consensus 6 id~~~~~~~~~~~~~~~a~~--~~~~~~~~~~--~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~v 81 (359)
-|+.+.++..+. +.+++. ........|+ ..+...++++.+++++|.+..++++||++|+..++.+++ ++|++|
T Consensus 31 p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~l~~~~-~~gd~v 107 (398)
T 1gc0_A 31 PVYQTATFTFPT--VEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGGEAGLALASGMGAITSTLWTLL-RPGDEV 107 (398)
T ss_dssp CBCCCSCBCCC-----------------------CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHC-CTTCEE
T ss_pred CccCCCccccCC--HHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-cCCCEE
Confidence 455565555544 333332 1111223344 467889999999999999988999999999999999987 599999
Q ss_pred EecCCCcceeeccc-cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHH
Q 018243 82 ILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTD 160 (359)
Q Consensus 82 l~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~ 160 (359)
+++.++|.+.+... ......|.+++.++.. |++++++.++ +++++|+++++ +||||.+.+ ++
T Consensus 108 l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~i~--------~~~~~v~~~~~-~nptG~~~~---l~ 170 (398)
T 1gc0_A 108 LLGNTLYGCTFAFLHHGIGEFGVKLRHVDMA-----DLQALEAAMT--------PATRVIYFESP-ANPNMHMAD---IA 170 (398)
T ss_dssp EEESSCCSHHHHHHHHTGGGGTCEEEEECTT-----CHHHHHHHCC--------TTEEEEEEESS-CTTTCCCCC---HH
T ss_pred EEeCCCchhHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcC--------CCCeEEEEECC-CCCCccccc---HH
Confidence 99999998866411 0135678888888754 8999999998 68999999665 559999986 89
Q ss_pred HHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCce---eeEEecCHHHHH-HHHHHHHh-hC
Q 018243 161 SVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV---GSVIVGSKEFIK-KARRLRKT-LG 235 (359)
Q Consensus 161 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~---gg~~~~~~~~~~-~~~~~~~~-~~ 235 (359)
+|.++|+++|+++|+|++|..+... .+ +..+.|+++.|+||+++++. ||+++++++.++ .++..... ++
T Consensus 171 ~i~~l~~~~~~~li~D~~~~~~~~~---~~---~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~ 244 (398)
T 1gc0_A 171 GVAKIARKHGATVVVDNTYCTPYLQ---RP---LELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTG 244 (398)
T ss_dssp HHHHHHGGGTCEEEEECTTTHHHHC---CG---GGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTC
T ss_pred HHHHHHHHcCCEEEEECCCcccccC---Cc---hhhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCC
Confidence 9999999999999999998654432 11 22378999999999998764 688888887665 55544444 44
Q ss_pred CCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceE-ecC---------------CccceEEEEEeccc
Q 018243 236 GGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRV-DVD---------------AVETNIVYFEITED 299 (359)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~-~~~---------------~~~~~~~~~~~~~~ 299 (359)
.+. ++..++++..+++.... ++++..++++.+.+.|++.|++.- ..+ +..++++.+.++.
T Consensus 245 ~~~--~~~~~~~~~~~l~~~~~-~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~- 320 (398)
T 1gc0_A 245 AVL--SPHDAALLMRGIKTLNL-RMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG- 320 (398)
T ss_dssp CCC--CHHHHHHHHHHHTTHHH-HHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT-
T ss_pred CCC--CHHHHHHHHhccchHHH-HHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC-
Confidence 444 44555555666654433 677778888888888888654431 111 1357788888865
Q ss_pred hHHHHHHHHHHHHhcCceecc---C---------------------------CCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018243 300 SKLYAACLLKKLEEHGVLVMP---E---------------------------SSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 300 ~~~~~~~~~~~l~~~gi~~~~---~---------------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
..+...+.+.+.|+.+.. + ....+|++++...++++++.+.++|+++
T Consensus 321 ---~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 321 ---GIGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp ---HHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 234455566777766532 2 1478999998888888888888888754
No 136
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.98 E-value=3.4e-30 Score=234.63 Aligned_cols=328 Identities=16% Similarity=0.109 Sum_probs=226.1
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCCCC--------ccCCChHHHHHH----HHHHHHhCCCC-----eEEcCCchHHHH
Q 018243 5 TVDLRSDTVTKPTEAMRAAMASAEVDDD--------VLMHDPTAFRLE----TEMAKVMGKEA-----GLFVPSGTMGNL 67 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~a~~ 67 (359)
.|+|..+.. .+++.+++++.+...+.. .|+..+...+++ +.+++++|.+. .+++++|++++.
T Consensus 46 ~i~L~a~e~-~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs~an~ 124 (483)
T 1rv3_A 46 GLELIASEN-FASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANF 124 (483)
T ss_dssp SEECCTTCC-CCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHH
T ss_pred CeEEEcCCC-CCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcHHHHH
Confidence 467755443 356899999987654422 244445555555 88899999874 388999998888
Q ss_pred HHHHHhhhhcCCeEEecCCCcceeecccc-----ccccCC--ccceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeE
Q 018243 68 ISVLVHCETRGSEVILGDNSHIHIYENGG-----ISTIGG--VHPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRL 139 (359)
Q Consensus 68 ~~l~~~~~~~g~~vl~~~~~~~~~~~~~~-----~~~~~g--~~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 139 (359)
.++.+++ ++||+|+++++.|.+....+. .+...| .+++.++.+ +++.+|+++|++.+++ +++++
T Consensus 125 ~~~~all-~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~-------~~tkl 196 (483)
T 1rv3_A 125 AVYTALV-EPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARL-------FHPKL 196 (483)
T ss_dssp HHHHHHT-CTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHH-------HCCSE
T ss_pred HHHHHhc-CCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhh-------cCCcE
Confidence 8888887 699999999999887754221 123334 233344434 5688999999999984 57889
Q ss_pred EEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEec
Q 018243 140 ICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVG 219 (359)
Q Consensus 140 v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~ 219 (359)
|++ +++| ++ .+.+ +++|+++|+++|+++|+|++|..|.... +....++ .++|+++.|+||+|++|.||++++
T Consensus 197 Ii~-~~sn-~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~-~~~~~p~-~~~div~~s~~K~l~GprgG~i~~ 268 (483)
T 1rv3_A 197 IIA-GTSC-YS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVA-GVVPSPF-EHCHVVTTTTHKTLRGCRAGMIFY 268 (483)
T ss_dssp EEE-CCSS-CC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHH-TSSCCGG-GTCSEEEEESSGGGCCCSCEEEEE
T ss_pred EEE-eCCc-CC-CcCC---HHHHHHHHHHcCCEEEEEccchhccccc-CCCCCCC-CCCcEEEecCcccCCCCCceEEEE
Confidence 998 6655 55 6665 8999999999999999999987665532 2222222 268999999999998788898888
Q ss_pred CHH---------------HHHHHHHHHHhhCCCcchhHHHHHHHHHHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCc
Q 018243 220 SKE---------------FIKKARRLRKTLGGGMRQVGVLCAAALVAL----QENVLVMLDGDHKKAKLLAEGLNQLKGL 280 (359)
Q Consensus 220 ~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 280 (359)
+++ +.+.+.........+..... ..++...++ ....++..++..+++++|.+.|+++ |+
T Consensus 269 ~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~-~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 346 (483)
T 1rv3_A 269 RRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNH-AIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL-GY 346 (483)
T ss_dssp ECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHH-HHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred cchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHH-HHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 653 33333322111111111111 122222222 2334557778889999999999998 99
Q ss_pred eEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceec----cCC-----CcEEEEEeCCCCC----HHHHHHHHHHHH
Q 018243 281 RVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVM----PES-----STRVRIVVHHQIS----ANDVHYTLSCFQ 347 (359)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----~~~-----~~~lRi~~~~~~~----~~~i~~~~~~l~ 347 (359)
++..+.....++++.+.. .+.+..++.+.|.+.||.+. |+. ..++||+++..++ ++++++++++|+
T Consensus 347 ~~~~~~~~~~~~~v~~~~-~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~ 425 (483)
T 1rv3_A 347 KIVTGGSDNHLILVDLRS-KGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIH 425 (483)
T ss_dssp EEGGGSCSSSEEEEEGGG-GTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHH
T ss_pred EeccCCCCCceEEEeccC-CCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHH
Confidence 886443234577888764 23467788888999999987 653 4689999864344 999999999999
Q ss_pred HHHHH
Q 018243 348 KIYAG 352 (359)
Q Consensus 348 ~~~~~ 352 (359)
++++.
T Consensus 426 ~~l~~ 430 (483)
T 1rv3_A 426 RGIEL 430 (483)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99876
No 137
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.98 E-value=6.2e-30 Score=233.85 Aligned_cols=334 Identities=16% Similarity=0.130 Sum_probs=233.0
Q ss_pred cccCCCCCChHHHHHHHHHcCCCCC-CccCCChHHH----HHHHHHHHHhCCC-------CeEEcCCchHHHHHHHHHhh
Q 018243 7 DLRSDTVTKPTEAMRAAMASAEVDD-DVLMHDPTAF----RLETEMAKVMGKE-------AGLFVPSGTMGNLISVLVHC 74 (359)
Q Consensus 7 d~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~----~l~~~la~~~~~~-------~~~~~~~gt~a~~~~l~~~~ 74 (359)
++.+.....++|.+.+++.+..... ..+..++... ++++.+++++|.+ .+++++||++|+..++.++.
T Consensus 59 ~l~s~~t~~~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~ 138 (502)
T 3hbx_A 59 NLASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFK 138 (502)
T ss_dssp BTTCCSCCCCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHH
T ss_pred eeccccCCCCCHHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHH
Confidence 3444334566788999988765432 2234455554 4555678889987 23578999999999988876
Q ss_pred hh-------cCC-----eEEecCCCcceeeccccccccCCccceeeecCCC-CCCCHHHHHHHhcCCCCCccCCceeEEE
Q 018243 75 ET-------RGS-----EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQD-GTMDIDLIEAAIRDPKGEIVYPTTRLIC 141 (359)
Q Consensus 75 ~~-------~g~-----~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~v~ 141 (359)
.. +|+ .|+++.++|.+..+ .+...|++++.++.+++ +.+|+++|++.++ +++++|+
T Consensus 139 ~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~---~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~--------~~t~~v~ 207 (502)
T 3hbx_A 139 RKWQNKRKAEGKPVDKPNIVTGANVQVCWEK---FARYFEVELKEVKLSEGYYVMDPQQAVDMVD--------ENTICVA 207 (502)
T ss_dssp HHHHHHHHHTTCCCSCCEEEEETTCCHHHHH---HHHHTTCEEEEECCBTTBCSCCHHHHHHHCC--------TTEEEEE
T ss_pred HHHhHHHHhcCCCCCCcEEEEcCCchHHHHH---HHHHcCceeEEEecCCCcCcCCHHHHHHHHh--------hCCEEEE
Confidence 42 265 89999999988664 37788999999987655 8899999999999 6788888
Q ss_pred EeccccCCCceecChhhHHHHHHHHHHc------CcEEEEecccccchhhhcCchhH-hh-hcCccEEEEeccccCCCce
Q 018243 142 LENTHANCGGRCLSVEYTDSVGEIAKKH------GLKLHIDGARIFNAAVALGVPVR-RL-VQAADSASVCLSKGLGAPV 213 (359)
Q Consensus 142 i~~~~~~ptG~~~~~~~l~~i~~~~~~~------~~~li~D~a~~~~~~~~~~~~~~-~~-~~~~d~~~~s~~K~~g~~~ 213 (359)
+++ ++||||.+.+ +++|.++|+++ |+++|+|+||+.+..+....... .+ ..++|+++++.||++++|.
T Consensus 208 ~~~-~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~ 283 (502)
T 3hbx_A 208 AIL-GSTLNGEFED---VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYA 283 (502)
T ss_dssp EEB-SCTTTCCBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCS
T ss_pred Eec-CCCCCCcccC---HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCC
Confidence 855 5559999866 89999999999 99999999986544321111110 11 2478999999999997776
Q ss_pred e-eEEec-CHHHHHHHHHHH-HhhCCC-------cch---hHHHHHHHHHHH-HHhHHHHhhhHHHHHHHHHHHHhcCCC
Q 018243 214 G-SVIVG-SKEFIKKARRLR-KTLGGG-------MRQ---VGVLCAAALVAL-QENVLVMLDGDHKKAKLLAEGLNQLKG 279 (359)
Q Consensus 214 g-g~~~~-~~~~~~~~~~~~-~~~~~~-------~~~---~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~g 279 (359)
| |+++. +++.+....... .+.+.. .+. ......+++..+ .+...++.++..+++++|.+.|+++++
T Consensus 284 g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (502)
T 3hbx_A 284 GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTER 363 (502)
T ss_dssp SCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 6 65554 555432211000 111111 111 112222223222 233344778888999999999999977
Q ss_pred ceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceec----c---CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 280 LRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVM----P---ESSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----~---~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
+++..+....++++|.++.....+..++.+.|.++||.+. | .+...+|++++..+++++++.+++.|++++++
T Consensus 364 ~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~~ 443 (502)
T 3hbx_A 364 FNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRE 443 (502)
T ss_dssp EEECSCSSSSSEEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCceEEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 9986442578889998875323466799999999999862 2 13468999999999999999999999999988
Q ss_pred HHh
Q 018243 353 VCE 355 (359)
Q Consensus 353 ~~~ 355 (359)
+.+
T Consensus 444 l~~ 446 (502)
T 3hbx_A 444 LDE 446 (502)
T ss_dssp HHT
T ss_pred HHh
Confidence 764
No 138
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.98 E-value=2e-29 Score=224.81 Aligned_cols=286 Identities=21% Similarity=0.219 Sum_probs=211.3
Q ss_pred CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCC
Q 018243 36 HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDG 114 (359)
Q Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 114 (359)
..+...++++.+++++|.+..+++++|++|+..++..+. ++|++|+++.++|.+..... ..+...|.+++.++.+
T Consensus 62 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~l~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 137 (398)
T 2rfv_A 62 GNPTTDALEKKLAVLERGEAGLATASGISAITTTLLTLC-QQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA--- 137 (398)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHC-CTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT---
T ss_pred CChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC---
Confidence 467889999999999999888999999999999999887 59999999999998866410 0126678888888765
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh
Q 018243 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
|++++++.++ +++++|+++++ +||||.+++ +++|.++|++||+++|+|++|..+... .. +
T Consensus 138 --d~~~l~~~i~--------~~~~~v~~~~~-~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~---~~---~ 197 (398)
T 2rfv_A 138 --KPEEIRAAMR--------PETKVVYIETP-ANPTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQ---QP---L 197 (398)
T ss_dssp --SHHHHHHHCC--------TTEEEEEEESS-BTTTTBCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC---CG---G
T ss_pred --CHHHHHHhcC--------CCCeEEEEECC-CCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC---Cc---h
Confidence 8999999998 68999999665 559999987 899999999999999999998655432 11 1
Q ss_pred hcCccEEEEeccccCCCce---eeEEecCHHHHH-HHHHHHHhh-CCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHH
Q 018243 195 VQAADSASVCLSKGLGAPV---GSVIVGSKEFIK-KARRLRKTL-GGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKL 269 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~~---gg~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 269 (359)
..+.|+++.|+||++++|. ||++++++++++ .++...... +.+. ++..++++..+++.... +.++..++.+.
T Consensus 198 ~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~-~~~~~~~~~~~ 274 (398)
T 2rfv_A 198 QLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCM--SPFNAWLTLRGVKTLGI-RMERHCENALK 274 (398)
T ss_dssp GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCC--CHHHHHHHHHHHTTHHH-HHHHHHHHHHH
T ss_pred hhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCCCC--CHHHHHHHHhhhhhHHH-HHHHHHHHHHH
Confidence 2368999999999997654 588999988877 555554444 4444 44556666667765433 56667777888
Q ss_pred HHHHHhcCC--------------CceEecC--CccceEEEEEeccchHHHHHHHHHHHHhcCceeccC------------
Q 018243 270 LAEGLNQLK--------------GLRVDVD--AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE------------ 321 (359)
Q Consensus 270 l~~~l~~~~--------------g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~------------ 321 (359)
+.+.|++.+ ++++..+ ...++++++.++. ...+...+.+.+...|+.+.++
T Consensus 275 l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~ 353 (398)
T 2rfv_A 275 IARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAG-GLEAGRRMINSVELCLLAVSLGDTETLIQHPASM 353 (398)
T ss_dssp HHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT-HHHHHHHHHTTCSSSEECSCCSSSSCEEECHHHH
T ss_pred HHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC-CHHHHHHHHHhCCcceeccCCCCcceeeeccccc
Confidence 888887753 2222111 1357888888875 1224455555555556665443
Q ss_pred -------------C--CcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018243 322 -------------S--STRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 322 -------------~--~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
+ .+.+|++++...+++++++++++|+++
T Consensus 354 ~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 354 THSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp TSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 1 578999999888888888888888653
No 139
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.97 E-value=5.9e-32 Score=241.65 Aligned_cols=322 Identities=18% Similarity=0.143 Sum_probs=205.9
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCC----CC-ccC----CChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHHh
Q 018243 5 TVDLRSDTVTKPTEAMRAAMASAEVD----DD-VLM----HDPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~----~~-~~~----~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~~ 73 (359)
+|.|.......++|.+.+++.+.... .. .|. ..+...++++.+++++|.+ ..++++||++|+..++.++
T Consensus 21 ~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~l 100 (400)
T 3vax_A 21 MTYLDAAATTRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIALLGL 100 (400)
T ss_dssp -CCCCCCCCSSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHHHHTT
T ss_pred cEEecCCCCCCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHHH
Confidence 45555555556667777777664321 10 111 1344688999999999986 3577788889999988887
Q ss_pred h---hhcCC-eEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC
Q 018243 74 C---ETRGS-EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC 149 (359)
Q Consensus 74 ~---~~~g~-~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p 149 (359)
+ .++|| +|+++.++|.+...........|++++.++.+.++.+|+++|++.++ +++++|++++ ++||
T Consensus 101 ~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~--------~~~~~v~~~~-~~np 171 (400)
T 3vax_A 101 APYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLR--------PDTLLVSLMH-VNNE 171 (400)
T ss_dssp HHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCC--------TTEEEEECCS-BCTT
T ss_pred HHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcC--------CCceEEEEEC-CCCC
Confidence 6 24899 99999999888654111223468899999888889999999999998 6889998855 5569
Q ss_pred CceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEe-cCH-HHH--
Q 018243 150 GGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIV-GSK-EFI-- 224 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~-~~~-~~~-- 224 (359)
||.+.+ +++|.++|++||+++|+|++|+++... ..... . .|+++.|+||.+| +.| |+++ .++ ++.
T Consensus 172 tG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~---~~~~~--~-~d~~~~s~~K~~g-~~g~g~~~~~~~~~~~~~ 241 (400)
T 3vax_A 172 TGVIQP---VAELAQQLRATPTYLHVDAAQGYGKVP---GDLTT--P-IDMISISGHKIGA-PKGVGALVTRRREEMDDE 241 (400)
T ss_dssp TCBBCC---HHHHHHHHTTSSCEEEEECTTTTTTSG---GGGGS--C-CSEEEEETGGGTS-CSSCEEEEECBCSSSTTC
T ss_pred ceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCCCC---cChhh--c-CcEEEEeHHHhCC-CCceEEEEEecchhcccc
Confidence 999988 799999999999999999998654432 11111 1 7899999999766 444 6666 543 111
Q ss_pred -HHHHHHH-------HhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCc--cceE
Q 018243 225 -KKARRLR-------KTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV--ETNI 291 (359)
Q Consensus 225 -~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~--~~~~ 291 (359)
..+.... .....+. +....++...++ ....++.+++..++++++.+.|+ .+++++..++. .+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~ 318 (400)
T 3vax_A 242 RVPLEPIMFGGGQERKLRPGTL--PVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHI 318 (400)
T ss_dssp BCCCCCSSCSSCTGGGTSCSCC--CHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTE
T ss_pred ccccCceecCCCceeeeecCCC--CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCE
Confidence 1111000 0111111 222222222333 34445577788899999999999 78998754332 1356
Q ss_pred EEEEeccchHHHHHHHHHHHHhcCceeccCC-----------------------CcEEEEEe-CCCCCHHHHHHHHHHHH
Q 018243 292 VYFEITEDSKLYAACLLKKLEEHGVLVMPES-----------------------STRVRIVV-HHQISANDVHYTLSCFQ 347 (359)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-----------------------~~~lRi~~-~~~~~~~~i~~~~~~l~ 347 (359)
+++.++. .+.+++.+.|. +||.+.++. .+++|+++ +...+++++++++++|+
T Consensus 319 ~~~~~~~---~~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~ 394 (400)
T 3vax_A 319 LNLSFED---VDAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVA 394 (400)
T ss_dssp EEEECTT---CCHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC---------------
T ss_pred EEEEeCC---CCHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHH
Confidence 7777764 36788999999 999887642 47899999 88899999999999999
Q ss_pred HHHHH
Q 018243 348 KIYAG 352 (359)
Q Consensus 348 ~~~~~ 352 (359)
+++++
T Consensus 395 ~~~~~ 399 (400)
T 3vax_A 395 KLKPS 399 (400)
T ss_dssp -----
T ss_pred HHhcc
Confidence 88764
No 140
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.97 E-value=1.5e-30 Score=233.18 Aligned_cols=323 Identities=13% Similarity=0.050 Sum_probs=218.6
Q ss_pred cccccccCCCC-CCh-HHHHHHHHHcCCC-CCCccCCChHHHHHHHHHHHHh-CCC------Ce---EEcCCchHHHHHH
Q 018243 3 TRTVDLRSDTV-TKP-TEAMRAAMASAEV-DDDVLMHDPTAFRLETEMAKVM-GKE------AG---LFVPSGTMGNLIS 69 (359)
Q Consensus 3 ~~~id~~~~~~-~~~-~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~~-~~~------~~---~~~~~gt~a~~~~ 69 (359)
...|||..+.+ ..+ ++.+.+++.++.. ....|+..++..++++.+++++ +.+ .. ..+.+|++++..+
T Consensus 41 ~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~ 120 (409)
T 4eu1_A 41 KRKVNLSIGVYRDDADQPFVLECVKQATLGTNMDYAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIG 120 (409)
T ss_dssp SSCEECCCSSCCCTTSCCCCCHHHHTCCCCSCCCCCCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHH
T ss_pred cCceeeeeeEEECCCCCEeecHHHHhcCccccccCCCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHHH
Confidence 45799999886 443 3566777776532 2345666677899999999987 554 11 3467777777765
Q ss_pred HHH--hhhhcCCeEEecCCCcceeeccccccccCCccceeeec--CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEecc
Q 018243 70 VLV--HCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN--NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENT 145 (359)
Q Consensus 70 l~~--~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~ 145 (359)
... .+.++||+|++++|+|.+... .++..|.+++.++. ++++.+|+++|++.+++.. .+++++++ +.
T Consensus 121 ~~~~~~~~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-----~~~~~i~~-~~ 191 (409)
T 4eu1_A 121 GDLLNRFVANCNRIYGPDVGYPNHES---IFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAP-----EGSVILVH-AC 191 (409)
T ss_dssp HHHGGGTSSSCCEEEEESSCCTHHHH---HHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSC-----TTCEEEEE-SS
T ss_pred HHHHHHhcCCCCEEEEeCCCcHhHHH---HHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCC-----CCcEEEEE-CC
Confidence 432 233688999999999877653 37778989998875 4567889999999997320 34555555 55
Q ss_pred ccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh---cCchhHhhh-cCccE-EEEeccccCCCcee--eE--
Q 018243 146 HANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA---LGVPVRRLV-QAADS-ASVCLSKGLGAPVG--SV-- 216 (359)
Q Consensus 146 ~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~---~~~~~~~~~-~~~d~-~~~s~~K~~g~~~g--g~-- 216 (359)
++||||.+++.+++++|+++|++||+++|+||+|....... .+.+...+. ...++ ++.|+||.+|.++. ||
T Consensus 192 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~ 271 (409)
T 4eu1_A 192 AHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALH 271 (409)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEE
Confidence 67799999999999999999999999999999965433321 112233332 23344 44599999986542 66
Q ss_pred -EecCHH----HHHHHHHHHHhhCCCcchhHHHHHHHHHHHH---------HhHHHHhhhHHHHHHHHHHHHhcCCC---
Q 018243 217 -IVGSKE----FIKKARRLRKTLGGGMRQVGVLCAAALVALQ---------ENVLVMLDGDHKKAKLLAEGLNQLKG--- 279 (359)
Q Consensus 217 -~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---------~~~~~~~~~~~~~~~~l~~~l~~~~g--- 279 (359)
++.+++ +.+.++........+. +...+.++...++ ...++.++++.++++++.+.|+++ |
T Consensus 272 ~v~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 348 (409)
T 4eu1_A 272 ISTASAEEAKRLVSQLALLIRPMYNNP--PLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKAC-GSVH 348 (409)
T ss_dssp EECSSHHHHHHHHHHHHHHHHHHHSSC--CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCS
T ss_pred EEeCCHHHHHHHHHHHHHHHhhhcCCC--ChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCC
Confidence 466777 5555555443333333 2333333333332 224446777888999999999987 5
Q ss_pred -ceEecCCccceEEEEEeccchHHHHHHHHHHH-HhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 280 -LRVDVDAVETNIVYFEITEDSKLYAACLLKKL-EEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 280 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
+++.. +..+.++|+.++. ++...| +++||.+.|++ |++++ ..+++++++++++|++++
T Consensus 349 ~~~~~~-~~~~~~~~~~~~~-------~~~~~ll~~~gv~v~p~~----Ri~~~-~~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 349 DWSHIE-RQVGMMAYTGLTR-------EQVELLRSEYHIYMTLNG----RAAVS-GLNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp CCHHHH-HSCSSEEECCCCH-------HHHHHHHHHHCEECCTTC----EEEGG-GCCTTTHHHHHHHHHHHH
T ss_pred Ccceec-CCceEEEEeCCCH-------HHHHHHHHcCCEEEcCCC----EEEEE-ecCHhhHHHHHHHHHHHh
Confidence 55432 3466677754432 334555 67899998864 88886 577888999999998875
No 141
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.97 E-value=3.3e-30 Score=232.96 Aligned_cols=336 Identities=16% Similarity=0.125 Sum_probs=223.0
Q ss_pred cccccccCCCC---CC-hHHHHHHHHHcCCCCCCc----cCCChHHHHHHHHHHHHh--CC-CCeEEcCCchHHHHHHHH
Q 018243 3 TRTVDLRSDTV---TK-PTEAMRAAMASAEVDDDV----LMHDPTAFRLETEMAKVM--GK-EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~~~---~~-~~~~~~~a~~~~~~~~~~----~~~~~~~~~l~~~la~~~--~~-~~~~~~~~gt~a~~~~l~ 71 (359)
.+++||.++.. .+ .+|.+.+++.+....... .+..+...++++.+++++ +. +..++++||++|+..++.
T Consensus 43 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~ 122 (439)
T 3dxv_A 43 RELIDLSGAWGAASLGYGHPAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYR 122 (439)
T ss_dssp CEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCSCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHH
T ss_pred CEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHH
Confidence 35789998866 22 458888887764433222 234567789999999999 44 466899999999999999
Q ss_pred Hhhh-hcCCeEEecCCCcceeeccccccccCCccc--------------eeeecCCCCCC-----CHHHHHHHhcCCCCC
Q 018243 72 VHCE-TRGSEVILGDNSHIHIYENGGISTIGGVHP--------------RTVKNNQDGTM-----DIDLIEAAIRDPKGE 131 (359)
Q Consensus 72 ~~~~-~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~--------------~~v~~~~~~~~-----~~~~l~~~l~~~~~~ 131 (359)
.++. .++++|++.++.|...+. ......+... ..++.+..+.. |+++|++.+++.
T Consensus 123 ~~~~~~~~~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--- 197 (439)
T 3dxv_A 123 AIVKATGRSGVIAFAGAYHGCTV--GSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAV--- 197 (439)
T ss_dssp HHHHHHSCCEEEEETTCCCCSSH--HHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTS---
T ss_pred HHHHHhCCCEEEEECCCCCCCcH--HHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhc---
Confidence 8632 256678877777655443 1133333221 22333322222 689999999410
Q ss_pred ccCCceeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc--hhHhhhcCccEEEEecccc
Q 018243 132 IVYPTTRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV--PVRRLVQAADSASVCLSKG 208 (359)
Q Consensus 132 ~~~~~~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~~d~~~~s~~K~ 208 (359)
+.+++++|+++++++ ++|.+ .+.+++++|.++|++||+++|+||+|.. +...+. ....+....|++ |+||.
T Consensus 198 -~~~~~~~vi~~p~~~-~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g--~g~~g~~~~~~~~~~~~di~--s~sK~ 271 (439)
T 3dxv_A 198 -PAGSIGAAFIEPIQS-DGGLIVPPDGFLRKFADICRAHGILVVCDEVKVG--LARSGRLHCFEHEGFVPDIL--VLGKG 271 (439)
T ss_dssp -CTTCEEEEEECSSBS-TTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTC--TTTTSSSSGGGGTTCCCSEE--EECGG
T ss_pred -CCCCEEEEEEccccC-CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcCchhhHHHhcCCCCCEE--EEcch
Confidence 015788999977666 55655 4556699999999999999999999852 222222 112222245655 77899
Q ss_pred CCCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhc----CCCceE
Q 018243 209 LGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQ----LKGLRV 282 (359)
Q Consensus 209 ~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~----~~g~~~ 282 (359)
++++.. |++++++++++.+... ..+.++ .+++.++++..+++...+ +..++..++.+++++.|++ .+.+..
T Consensus 272 ~~~G~riG~~~~~~~~~~~~~~~--~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 348 (439)
T 3dxv_A 272 LGGGLPLSAVIAPAEILDCASAF--AMQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGD 348 (439)
T ss_dssp GGTTSCCEEEEEEHHHHTSCSSS--SCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEE
T ss_pred hcCCcceEEEEECHHHHhhhcCC--CcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 975323 7888898888775432 234444 566777777777754322 2455566666666666655 444443
Q ss_pred ecCCccceEEEEEecc------chHHHHHHHHHHHHhcCceeccCCC--cEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 283 DVDAVETNIVYFEITE------DSKLYAACLLKKLEEHGVLVMPESS--TRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 283 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~gi~~~~~~~--~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
. +..+.++++.+.. +...+..++.+.|.++||.+.+++. .++|++++...+++++++++++|+++++++.
T Consensus 349 ~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 426 (439)
T 3dxv_A 349 I--RGRGLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGMNGNVLEFTPPLTITETDIHKALDLLDRAFSELS 426 (439)
T ss_dssp E--EEETTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred E--EEEEEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 3 3467788887731 1235678899999889999988765 8899999889999999999999999998764
No 142
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.97 E-value=2.4e-29 Score=225.07 Aligned_cols=304 Identities=18% Similarity=0.159 Sum_probs=218.5
Q ss_pred CCCCCChH-HHHHHHHHcCCCCCCccCC--ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCC
Q 018243 10 SDTVTKPT-EAMRAAMASAEVDDDVLMH--DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDN 86 (359)
Q Consensus 10 ~~~~~~~~-~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~ 86 (359)
++++..++ +.+.+++.+ .....|+. .+...++++.+++++|.+..++++||++|+..++.+++ ++|++|+++.+
T Consensus 27 s~~~~~~~~~~~~~~~~~--~~~~~y~~~~~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~al~~l~-~~gd~vi~~~~ 103 (412)
T 2cb1_A 27 VAAYGFKTLEEGQERFAT--GEGYVYARQKDPTAKALEERLKALEGALEAVVLASGQAATFAALLALL-RPGDEVVAAKG 103 (412)
T ss_dssp CSBCCCSSHHHHHHHHHH--CCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTC-CTTCEEEEETT
T ss_pred cceeecCChHHHHHHhcc--ccCcCcCCCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEeCC
Confidence 33445555 445555442 23344553 47889999999999999988999999999999999887 59999999999
Q ss_pred Ccceeeccc-cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHH
Q 018243 87 SHIHIYENG-GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEI 165 (359)
Q Consensus 87 ~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~ 165 (359)
.|.+.+... ..++..|.+++.++. |+++|++.++ +++++|+++++ +||||.+.+ +++|.++
T Consensus 104 ~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~l~~~i~--------~~~~~v~~~~~-~n~~G~~~~---l~~i~~l 165 (412)
T 2cb1_A 104 LFGQTIGLFGQVLSLMGVTVRYVDP------EPEAVREALS--------AKTRAVFVETV-ANPALLVPD---LEALATL 165 (412)
T ss_dssp CCHHHHHHHHHTTTTTTCEEEEECS------SHHHHHHHCC--------TTEEEEEEESS-CTTTCCCCC---HHHHHHH
T ss_pred CchhHHHHHHHHHHHcCCEEEEECC------CHHHHHHHhc--------cCCeEEEEeCC-CCCCccccc---HHHHHHH
Confidence 998766411 014567888888864 4899999998 78999999655 459999987 8999999
Q ss_pred HHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCce---eeEEecCH---------------------
Q 018243 166 AKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV---GSVIVGSK--------------------- 221 (359)
Q Consensus 166 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~---gg~~~~~~--------------------- 221 (359)
|++||+++|+|++|+.+... .. ....+.|+++.|+||++++|. |++++.++
T Consensus 166 ~~~~~~~li~D~~~~~~~~~--~~---~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 240 (412)
T 2cb1_A 166 AEEAGVALVVDNTFGAAGAL--CR---PLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPW 240 (412)
T ss_dssp HHHHTCEEEEECGGGTTTTS--CC---GGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------H
T ss_pred HHHcCCEEEEECCCcccccc--CC---ccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchh
Confidence 99999999999998665221 11 122378999999999997753 45555552
Q ss_pred ------HHHHHHHHHH-HhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEe-cCC-------
Q 018243 222 ------EFIKKARRLR-KTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVD-VDA------- 286 (359)
Q Consensus 222 ------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~------- 286 (359)
++.+.++... ...+. ...+..++.....++.... +.++..++++++.+.|.+.|++... .+.
T Consensus 241 ~~~~~~~~~~~~r~~~~~~~g~--~~~~~~a~~~~~~l~~l~~-~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~ 317 (412)
T 2cb1_A 241 EALRARCFPERVRTLGLSLCGM--ALSPFNAYLLFQGLETVAL-RVARMSETARFLAERLQGHPKVKALRYPGLPEDPAH 317 (412)
T ss_dssp HHHGGGHHHHHHHHHHTTTTCC--CCCHHHHHHHHHHGGGHHH-HHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTH
T ss_pred hccchHHHHHHHHHHHHHhcCC--CCChHHhHHHHcCCchHHH-HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccH
Confidence 3444444332 22332 2345555555656655433 6666778899999999998888743 221
Q ss_pred --------ccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC------------------------------CcEEEE
Q 018243 287 --------VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES------------------------------STRVRI 328 (359)
Q Consensus 287 --------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~------------------------------~~~lRi 328 (359)
..+.++.+.+ . +.+.+.+.|.+.||.+ .++ ...+|+
T Consensus 318 ~~~~~~~~~~~~iv~~~~-~----~~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~ 391 (412)
T 2cb1_A 318 RNARKYLASGGPILTLDL-G----DLERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRV 391 (412)
T ss_dssp HHHHHHCSSSCSEEEEEC-S----SHHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEE
T ss_pred HHHHHhCCCCceEEEEEe-C----CHHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEE
Confidence 2466788888 4 4556777777788886 331 468999
Q ss_pred EeCCCCCHHHHHHHHHHHHH
Q 018243 329 VVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 329 ~~~~~~~~~~i~~~~~~l~~ 348 (359)
+++...++++++.++++|++
T Consensus 392 s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 392 SVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp ECCSSCHHHHHHHHHHHHHC
T ss_pred EeccCCHHHHHHHHHHHHhh
Confidence 99999999999999988864
No 143
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.97 E-value=3.1e-29 Score=223.52 Aligned_cols=285 Identities=16% Similarity=0.130 Sum_probs=209.7
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018243 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.+...++++.+++++|.+..+++++|++|+..++.+++ ++||+|+++.|.|.+..... ..++..|.+++.++.+
T Consensus 61 ~~~~~~l~~~ia~~~g~~~~i~~~~g~~ai~~~~~~l~-~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~---- 135 (404)
T 1e5e_A 61 NPTVSNLEGKIAFLEKTEACVATSSGMGAIAATVLTIL-KAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA---- 135 (404)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHC-CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT----
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCChHHHHHHHHHHHh-CCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC----
Confidence 45667999999999999888999999999999998887 59999999999988755310 0356678898888765
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHH-cCcEEEEecccccchhhhcCchhHhh
Q 018243 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKK-HGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~-~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
|++++++.++ +++++|+++++ +||||.+++ +++|.++|++ +|+++|+|++|..+... .+. .
T Consensus 136 -d~~~l~~~i~--------~~t~~v~l~~p-~NptG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~---~~~-~- 197 (404)
T 1e5e_A 136 -IPGEVKKHMK--------PNTKIVYFETP-ANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT---NPV-D- 197 (404)
T ss_dssp -STTHHHHHCC--------TTEEEEEEESS-CTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC---CGG-G-
T ss_pred -CHHHHHHhcC--------CCCcEEEEECC-CCCCCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhC---Ccc-c-
Confidence 8889999998 68999999665 559999987 8999999999 99999999998654431 111 2
Q ss_pred hcCccEEEEeccccCCCce---eeEEecCHHHHH-HHHHHHHhh-CCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHH
Q 018243 195 VQAADSASVCLSKGLGAPV---GSVIVGSKEFIK-KARRLRKTL-GGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKL 269 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~~---gg~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 269 (359)
.+.|+++.|+||+++++. +|++++++++++ .++.....+ +.+ .++..++++..+++.... +.++..++.+.
T Consensus 198 -~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g~~--~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~ 273 (404)
T 1e5e_A 198 -FGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSV--ISPHDAWLITRGLSTLNI-RMKAESENAMK 273 (404)
T ss_dssp -GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCC--CCHHHHHHHHHHHTTHHH-HHHHHHHHHHH
T ss_pred -cCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCCCC--CCHHHHHHHHHhHhHHHH-HHHHHHHHHHH
Confidence 378999999999998765 588999988877 665443333 333 345556666667765333 56666777788
Q ss_pred HHHHHhcCCCce-EecC---------------CccceEEEEEeccchHHHHHHHHHHHHhcCceecc---C---------
Q 018243 270 LAEGLNQLKGLR-VDVD---------------AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMP---E--------- 321 (359)
Q Consensus 270 l~~~l~~~~g~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~---~--------- 321 (359)
+.+.|++.+.+. +..+ ...++++.+.++. ..+.+.+.|.+.||.+.. +
T Consensus 274 l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~ 349 (404)
T 1e5e_A 274 VAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS----GFEGAKKLLDNLKLITLAVSLGGCESLIQHP 349 (404)
T ss_dssp HHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT----HHHHHHHHHHTCSSSEESSCCCSSSCEEECG
T ss_pred HHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC----CHHHHHHHHHhCCCceeccCCCCcceeeecc
Confidence 888887764332 1111 1137777778765 234455666788884321 1
Q ss_pred ----------------C--CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 018243 322 ----------------S--STRVRIVVHHQISANDVHYTLSCFQKIYAGVCEE 356 (359)
Q Consensus 322 ----------------~--~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 356 (359)
+ .+++|+++. . ++++++++.|+++++++..+
T Consensus 350 ~~~~~~~~~~~~~~~~g~~~~~iRis~g--~--e~~~~li~~l~~al~~~~~~ 398 (404)
T 1e5e_A 350 ASMTHAVVPKEEREAAGITDGMIRLSVG--I--EDADELIADFKQGLDALLRS 398 (404)
T ss_dssp GGTTTTTSCHHHHHHTTCCTTEEEEECC--S--SCHHHHHHHHHHHHHHHHCC
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEeC--C--CCHHHHHHHHHHHHHHHHHh
Confidence 1 478999996 3 89999999999999887654
No 144
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.97 E-value=5.3e-30 Score=231.76 Aligned_cols=327 Identities=14% Similarity=0.069 Sum_probs=222.3
Q ss_pred ccccccCCCC-C-----ChHHHHHHHHHcCC----CCCCccCCChHHHHHHHHHHHHh-CCC-------CeEE--cCCch
Q 018243 4 RTVDLRSDTV-T-----KPTEAMRAAMASAE----VDDDVLMHDPTAFRLETEMAKVM-GKE-------AGLF--VPSGT 63 (359)
Q Consensus 4 ~~id~~~~~~-~-----~~~~~~~~a~~~~~----~~~~~~~~~~~~~~l~~~la~~~-~~~-------~~~~--~~~gt 63 (359)
..|||..+.+ . .+.+++.+++.+.. .....|....+..++++.+++++ |.+ ..++ ++||+
T Consensus 50 ~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~g~~~~~~~~~~i~~~~t~ggt 129 (448)
T 3meb_A 50 KKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGT 129 (448)
T ss_dssp TCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHH
T ss_pred CeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHhcCCCccccCcCcEEEEECCcHH
Confidence 3588887765 2 22388888844322 23445766778899999999998 765 2355 78888
Q ss_pred HHHHH--HHHHhhhhcCCeEEecCCCcceeeccccccc----cCCccceeeec-CC--CCCCCHHHHHHHhcCCCCCccC
Q 018243 64 MGNLI--SVLVHCETRGSEVILGDNSHIHIYENGGIST----IGGVHPRTVKN-NQ--DGTMDIDLIEAAIRDPKGEIVY 134 (359)
Q Consensus 64 ~a~~~--~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~----~~g~~~~~v~~-~~--~~~~~~~~l~~~l~~~~~~~~~ 134 (359)
+|+.. .+..++ .+||+|++++|+|.+... .++ ..|.+++.++. +. ++.+|++++++.+++..
T Consensus 130 ~al~l~~~~~~~~-~~gd~Vlv~~p~~~~~~~---~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~----- 200 (448)
T 3meb_A 130 GSLHIGFEFLHLW-MPKAEFYMPSTTWPNHYG---IYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAP----- 200 (448)
T ss_dssp HHHHHHHHHHHHH-CTTCCEEEESSCCTHHHH---HHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSC-----
T ss_pred HHHHHHHHHHHHh-CCCCEEEECCCCCHhHHH---HHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCC-----
Confidence 89877 445555 589999999999877653 366 78999999976 54 47899999999998421
Q ss_pred CceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc---CchhHhh-hcCccEE-EEeccccC
Q 018243 135 PTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL---GVPVRRL-VQAADSA-SVCLSKGL 209 (359)
Q Consensus 135 ~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~---~~~~~~~-~~~~d~~-~~s~~K~~ 209 (359)
++++++++ +.++||||..++.+++++|+++|++||+++|+|++|........ ..+...+ ....+++ +.|+||.|
T Consensus 201 ~~~~~v~~-~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 279 (448)
T 3meb_A 201 EKSIFLFH-ACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNF 279 (448)
T ss_dssp TTCEEEEE-SSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTS
T ss_pred CCcEEEEe-CCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccC
Confidence 23556666 66677999999999999999999999999999999653332210 1122222 1234544 55999999
Q ss_pred CCcee--eEE--ec---------CH----HHHHHHHHHHHhhCCCcchhHHHHHHHHHHHH---------HhHHHHhhhH
Q 018243 210 GAPVG--SVI--VG---------SK----EFIKKARRLRKTLGGGMRQVGVLCAAALVALQ---------ENVLVMLDGD 263 (359)
Q Consensus 210 g~~~g--g~~--~~---------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---------~~~~~~~~~~ 263 (359)
|.++. |++ +. ++ ++.+.+.........+. +...+.++...+. +..++.++++
T Consensus 280 g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~ 357 (448)
T 3meb_A 280 GLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMS--AIHGAYIVQVIVHDKRLLQMFYDNVKEMSARI 357 (448)
T ss_dssp CCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSC--CHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred CCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCc--cHHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 86532 665 44 45 55555554433333222 2333333333332 2244567778
Q ss_pred HHHHHHHHHHHhcC--CC------ceEecCCccceEEEEEeccchHHHHHHHHHHH-HhcCceeccCCCcEEEEEeCCCC
Q 018243 264 HKKAKLLAEGLNQL--KG------LRVDVDAVETNIVYFEITEDSKLYAACLLKKL-EEHGVLVMPESSTRVRIVVHHQI 334 (359)
Q Consensus 264 ~~~~~~l~~~l~~~--~g------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~~~~~lRi~~~~~~ 334 (359)
.++++++.+.|+++ |+ +.+.. +..+.+.|..++. ++...| .++||.+.++.. ||++. ..
T Consensus 358 ~~~r~~l~~~L~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~-------~~~~~ll~~~gV~v~~G~g---Ris~a-~~ 425 (448)
T 3meb_A 358 HRMRSLLHASLAKRKTPGPGSKGTWDHIL-TAIGMFTFTGLTP-------EHVDYLKEKWSIYLVKAGG---RMSMC-GL 425 (448)
T ss_dssp HHHHHHHHHHHHHTTCCCSTTTCCCTHHH-HCCSSEEECCCCH-------HHHHHHHHHHCEEECSGGG---EEEGG-GC
T ss_pred HHHHHHHHHHHHhhCCCCcCcccccceeC-CCceEEEecCCCH-------HHHHHHHHhCCEEEeCCCc---EEEEe-cC
Confidence 88999999999987 45 44432 3466777766542 455555 789999988653 99986 45
Q ss_pred CHHHHHHHHHHHHHHHHHHH
Q 018243 335 SANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 335 ~~~~i~~~~~~l~~~~~~~~ 354 (359)
+++++++++++|+++++++.
T Consensus 426 ~~~~i~~~~~~l~~~l~~~~ 445 (448)
T 3meb_A 426 TESNCDYVAEAIHDAVTKLP 445 (448)
T ss_dssp CTTTHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHHHHhcc
Confidence 78889999999999988543
No 145
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.97 E-value=3.1e-30 Score=230.55 Aligned_cols=324 Identities=15% Similarity=0.063 Sum_probs=217.6
Q ss_pred ccccccCCCC-CC---h--HHHHHHHHHcCCC--CCCccCCChHHHHHHHHHHHHhCCC--------CeEE--cCCchHH
Q 018243 4 RTVDLRSDTV-TK---P--TEAMRAAMASAEV--DDDVLMHDPTAFRLETEMAKVMGKE--------AGLF--VPSGTMG 65 (359)
Q Consensus 4 ~~id~~~~~~-~~---~--~~~~~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~~~~--------~~~~--~~~gt~a 65 (359)
..|||..+.+ .. | .+.+.+++.+... ....|....+..++++.++++++.. ..++ ++||+++
T Consensus 29 ~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~a 108 (401)
T 7aat_A 29 KKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGS 108 (401)
T ss_dssp TCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHH
T ss_pred CceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcchHH
Confidence 4688888765 21 1 2578887765432 3445666677899999999998643 2244 7888889
Q ss_pred HHHHHHHhh--hhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEE
Q 018243 66 NLISVLVHC--ETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLIC 141 (359)
Q Consensus 66 ~~~~l~~~~--~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~ 141 (359)
+..++..+. .++||+|++++|+|.+... .++..|.+++.++.+ .++.+|++.+++.+++.. +++++++
T Consensus 109 l~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-----~~~~~v~ 180 (401)
T 7aat_A 109 LRVGANFLQRFFKFSRDVYLPKPSWGNHTP---IFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIP-----EKSIILL 180 (401)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESCCTTHHH---HHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSC-----TTCEEEE
T ss_pred HHHHHHHHHHhccCCCEEEEcCCCchhHHH---HHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCC-----CCcEEEE
Confidence 988876654 2589999999999877653 367788898888753 468899999988887521 4677888
Q ss_pred EeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc---CchhHhhh-cCcc-EEEEeccccCCCcee--
Q 018243 142 LENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL---GVPVRRLV-QAAD-SASVCLSKGLGAPVG-- 214 (359)
Q Consensus 142 i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~---~~~~~~~~-~~~d-~~~~s~~K~~g~~~g-- 214 (359)
+ +.+|||||.+++.+++++|+++|++||+++|+||+|........ ..+...+. ...+ +++.|+||.||.++.
T Consensus 181 i-~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~Ri 259 (401)
T 7aat_A 181 H-ACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERA 259 (401)
T ss_dssp E-SSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCE
T ss_pred e-CCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCce
Confidence 7 55677999999999999999999999999999999654333211 11122221 1233 555699999986542
Q ss_pred eEEec---CHH----HHHHHHHHHHhhCCCcchhHHHHHHHHHHH---------HHhHHHHhhhHHHHHHHHHHHHhcC-
Q 018243 215 SVIVG---SKE----FIKKARRLRKTLGGGMRQVGVLCAAALVAL---------QENVLVMLDGDHKKAKLLAEGLNQL- 277 (359)
Q Consensus 215 g~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------~~~~~~~~~~~~~~~~~l~~~l~~~- 277 (359)
|+++. +++ +...++........+.. ...+.++...+ ....++.++++.++++++.+.|+++
T Consensus 260 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 337 (401)
T 7aat_A 260 GAFTVICRDAEEAKRVESQLKILIRPMYSNPP--MNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEG 337 (401)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHHHHHSSCC--HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEeCCHHHHHHHHHHHHHHHHhccCCCC--hHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 66553 666 44444444433333332 22222222222 3334446677888999999999887
Q ss_pred --CCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 278 --KGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 278 --~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
+++.+. .+..+.++|+.++ .+.+...+.++||.+.++ +|++++ ..+++++++++++|++++
T Consensus 338 ~~~~~~~~-~~~~~~~~~~~~~------~~~~~~ll~~~gi~v~~~----~Ris~~-~~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 338 SSHNWQHI-TDQIGMFCFTGLK------PEQVERLTKEFSIYMTKD----GRISVA-GVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp CCSCCHHH-HHCCSSEEECCCC------HHHHHHHHHHHCEECCTT----CEEEGG-GCCTTTHHHHHHHHHHHH
T ss_pred CCCCCcee-cCCcceEEecCCC------HHHHHHHHHhCCEeccCC----CeEEec-cCChhhHHHHHHHHHHHh
Confidence 125443 2346667776554 234433448899999765 599997 466677999999998875
No 146
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.97 E-value=1.2e-30 Score=232.98 Aligned_cols=328 Identities=15% Similarity=0.088 Sum_probs=216.4
Q ss_pred cccccccCCCCC-ChHHHHHHHHHcCCC------CCCccCCChHHHHHHHHHHHH--hC-CC-Ce-EEcCCchHHHHHHH
Q 018243 3 TRTVDLRSDTVT-KPTEAMRAAMASAEV------DDDVLMHDPTAFRLETEMAKV--MG-KE-AG-LFVPSGTMGNLISV 70 (359)
Q Consensus 3 ~~~id~~~~~~~-~~~~~~~~a~~~~~~------~~~~~~~~~~~~~l~~~la~~--~~-~~-~~-~~~~~gt~a~~~~l 70 (359)
..+|||.++.+. .++|.+.+++.+... ....|+..++..++++.++++ +| .+ .. ++++|+++++.. +
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~-~ 111 (400)
T 3asa_A 33 HTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFR-L 111 (400)
T ss_dssp SCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHH-H
T ss_pred CceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHH-H
Confidence 357899888665 345777777765331 123465556789999999999 46 32 23 455555666665 4
Q ss_pred HHhhhhcCCeEEecCCCcceeeccccccccCCcc-ceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC
Q 018243 71 LVHCETRGSEVILGDNSHIHIYENGGISTIGGVH-PRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC 149 (359)
Q Consensus 71 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~-~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p 149 (359)
..++ .+|++|+++.|+|.+... .+...|.+ ++.++.+.++.++.+ + ++. +++++|++++ ++||
T Consensus 112 ~~~~-~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~-l----~~~------~~~~~v~l~~-p~np 175 (400)
T 3asa_A 112 LSFF-GPNQTVAIQDPSYPAYLD---IARLTGAKEIIALPCLQENAFFPE-F----PED------THIDILCLCS-PNNP 175 (400)
T ss_dssp HHHH-CSSCEEEEEESCCHHHHH---HHHHTTCSEEEEEECCGGGTTCCC-C----CTT------CCCSEEEEES-SCTT
T ss_pred HHHc-CCCCEEEECCCCcHHHHH---HHHHcCCcceEecccchhcCcccC-h----hhc------cCccEEEEeC-CCCC
Confidence 5555 589999999999877554 36667888 888876543222211 1 110 3678999975 5679
Q ss_pred CceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhcCcc--EEEEeccccCCCce-e-eEEecCHHH-
Q 018243 150 GGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQAAD--SASVCLSKGLGAPV-G-SVIVGSKEF- 223 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~~~d--~~~~s~~K~~g~~~-g-g~~~~~~~~- 223 (359)
||.++|.+++++|+++|+++|+++|+|++|........ ..+...+....| +++.|+||++|.++ . ||+++++++
T Consensus 176 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~ 255 (400)
T 3asa_A 176 TGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELT 255 (400)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCB
T ss_pred CCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhc
Confidence 99999999999999999999999999999763222111 112323321133 66679999998543 2 888888777
Q ss_pred ------HHHHHHHHHh-hCCCcchhHHHHHHHHHHHHH-hHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEE
Q 018243 224 ------IKKARRLRKT-LGGGMRQVGVLCAAALVALQE-NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFE 295 (359)
Q Consensus 224 ------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~ 295 (359)
++.+...... ...+. +...+.++...++. ..++.++++.++++++.+.|++. ++++.. +..++++|+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~ 331 (400)
T 3asa_A 256 YADGHFVIQDWERFLSTTFNGA--SIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLAT-GFEVFG-GEHAPYLWVK 331 (400)
T ss_dssp CTTSCBHHHHHHHHHHHHCCCC--CHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT-TCEEEE-CSSSSEEEEE
T ss_pred cchhhhHHHHHHHHhccCccCC--ChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeC-CCCceEEEEe
Confidence 5554322221 11122 33444445555554 24446677888999999999998 888753 3468889998
Q ss_pred -eccchHHHHHHHHHHH-HhcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 296 -ITEDSKLYAACLLKKL-EEHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 296 -~~~~~~~~~~~~~~~l-~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
++. +.+..++.+.| +++||.+.++. ..++|+++ ..+++++++++++|+++++++.-
T Consensus 332 ~~~~--~~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~--~~~~e~i~~~l~~l~~~~~~~~~ 395 (400)
T 3asa_A 332 PTQA--NISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSS--LGKREDILAACERLQMAPALQSH 395 (400)
T ss_dssp CCCT--TCCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEEC--CSCHHHHHHHHHHHHC-------
T ss_pred ccCC--CCCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEe--eCCHHHHHHHHHHHHHHHHhhhh
Confidence 753 23455788877 46799997652 46799996 58899999999999999887653
No 147
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.97 E-value=3.9e-30 Score=231.00 Aligned_cols=315 Identities=18% Similarity=0.159 Sum_probs=223.0
Q ss_pred HHHHHHHHHcCCCC-C-CccC----CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcce
Q 018243 17 TEAMRAAMASAEVD-D-DVLM----HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIH 90 (359)
Q Consensus 17 ~~~~~~a~~~~~~~-~-~~~~----~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~ 90 (359)
+|++.+++.+.... . ..|+ ..+...++++.+++++|.+..++++||++|+..++.++..++|++|+++.++|.+
T Consensus 15 ~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~ 94 (418)
T 2c81_A 15 SDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVPYCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIA 94 (418)
T ss_dssp CHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTH
T ss_pred CHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHh
Confidence 36666666553321 1 1132 2334889999999999999889999999999999999822589999999999988
Q ss_pred eeccccccccCCccceeeecCC-CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc
Q 018243 91 IYENGGISTIGGVHPRTVKNNQ-DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH 169 (359)
Q Consensus 91 ~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~ 169 (359)
... .+...|.+++.++.+. ++.+|+++|++.++ +++++|+++ ||||... ++++|.++|+++
T Consensus 95 ~~~---~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~--------~~~~~v~~~----~~~G~~~---~~~~i~~~~~~~ 156 (418)
T 2c81_A 95 TAT---AVLNVNALPVFVDVEADTYCIDPQLIKSAIT--------DKTKAIIPV----HLFGSMA---NMDEINEIAQEH 156 (418)
T ss_dssp HHH---HHHHTTCEEEEECBCTTTCSBCHHHHGGGCC--------TTEEEECCB----CCTTCCC---CHHHHHHHHHHT
T ss_pred HHH---HHHHcCCEEEEEecCCCCCCcCHHHHHHhhC--------CCCeEEEEe----CCcCCcc---cHHHHHHHHHHC
Confidence 765 2667898999998765 68899999999998 678888863 3789864 489999999999
Q ss_pred CcEEEEecccccchhhhcCchhHhhhcCccEEEEec--cccCCCceeeEEec-CHHHHHHHHHHHHhhCC----------
Q 018243 170 GLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCL--SKGLGAPVGSVIVG-SKEFIKKARRLRKTLGG---------- 236 (359)
Q Consensus 170 ~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~--~K~~g~~~gg~~~~-~~~~~~~~~~~~~~~~~---------- 236 (359)
|+++|+|++|+.+.. ..+..... ..|+++.|+ ||+++++.||+++. ++++.+.++........
T Consensus 157 ~~~li~D~a~~~~~~-~~~~~~~~---~~~~~~~s~s~~K~~~~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 232 (418)
T 2c81_A 157 NLFVIEDCAQSHGSV-WNNQRAGT---IGDIGAFSCQQGKVLTAGEGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMH 232 (418)
T ss_dssp TCEEEEECTTCTTCE-ETTEETTS---SSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCT
T ss_pred CCEEEEECcccccCc-cCCEeccc---ccceEEEeccCCcccCCCCeEEEEECCHHHHHHHHHHHHhCcccccccccccc
Confidence 999999999877653 12222222 235555555 99998655588887 57888887755432110
Q ss_pred Ccc--------------hhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCcc----ce-EEEEEec
Q 018243 237 GMR--------------QVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVE----TN-IVYFEIT 297 (359)
Q Consensus 237 ~~~--------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~----~~-~~~~~~~ 297 (359)
.+. .....++.....++. .+...++..++++++.+.|+++|++++..++.. .. ++.+.++
T Consensus 233 ~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~-~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 311 (418)
T 2c81_A 233 GDMQLVKKGDIQGSNYCLSEFQSAILLDQLQE-LDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFD 311 (418)
T ss_dssp TCBSEEECCSSCCCBCCCCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEEC
T ss_pred chhhccccccccCcCCCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEc
Confidence 011 122223333333433 333667777889999999999889887533322 11 2336665
Q ss_pred cc--hHHHHHHHHHHHHhc-Cce---eccCC----------------------------------------CcEEEEEeC
Q 018243 298 ED--SKLYAACLLKKLEEH-GVL---VMPES----------------------------------------STRVRIVVH 331 (359)
Q Consensus 298 ~~--~~~~~~~~~~~l~~~-gi~---~~~~~----------------------------------------~~~lRi~~~ 331 (359)
.. .+.+..++.+.|.++ ||. +.++. ...+|++++
T Consensus 312 ~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~ 391 (418)
T 2c81_A 312 PVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHA 391 (418)
T ss_dssp GGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGG
T ss_pred cccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCC
Confidence 20 024678999999777 999 64321 147999999
Q ss_pred CCC-CHHHHHHHHHHHHHHHHHHH
Q 018243 332 HQI-SANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 332 ~~~-~~~~i~~~~~~l~~~~~~~~ 354 (359)
..+ +++|+++++++|+++++++.
T Consensus 392 ~~~gt~edi~~~~~~l~~~~~~~~ 415 (418)
T 2c81_A 392 ILLAEPSHLSLLVDAVAELARKFC 415 (418)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCCHHHHHHHHHHHHHHHHhhc
Confidence 999 99999999999999987654
No 148
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.97 E-value=2.1e-29 Score=227.08 Aligned_cols=336 Identities=16% Similarity=0.108 Sum_probs=225.0
Q ss_pred ccccccCCC---CCC-hHHHHHHHHHcCCCCCCc--c-C-CChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHHh
Q 018243 4 RTVDLRSDT---VTK-PTEAMRAAMASAEVDDDV--L-M-HDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~---~~~-~~~~~~~a~~~~~~~~~~--~-~-~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~~ 73 (359)
.++||.++. +.+ ++|++.+++.+....... + + ..+...++++.++++++. +..++++||++|+..++..+
T Consensus 44 ~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~ai~~~ 123 (429)
T 1s0a_A 44 RLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMA 123 (429)
T ss_dssp EEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCCSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHH
T ss_pred EEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHH
Confidence 468887764 222 458888888764422111 1 1 245668899999999964 34588899999999999875
Q ss_pred hh--h----cCCeEEecCCCcceeeccccccccCC-------------ccceeeecCC-----C-CCCCHHHHHHHhcCC
Q 018243 74 CE--T----RGSEVILGDNSHIHIYENGGISTIGG-------------VHPRTVKNNQ-----D-GTMDIDLIEAAIRDP 128 (359)
Q Consensus 74 ~~--~----~g~~vl~~~~~~~~~~~~~~~~~~~g-------------~~~~~v~~~~-----~-~~~~~~~l~~~l~~~ 128 (359)
.. + ++++|++.+|+|..... ......+ ..+..++.+. . +.+|+++|++.+++.
T Consensus 124 ~~~~~~~g~~~~~vi~~~~~yh~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 201 (429)
T 1s0a_A 124 LQYWQAKGEARQRFLTFRNGYHGDTF--GAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAH 201 (429)
T ss_dssp HHHHHHHTCCCCEEEEETTCCCCSSH--HHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHH
T ss_pred HHHhcccCCCCCeEEEECCCCCCCch--hhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhC
Confidence 41 2 48899999987654322 0111111 1233343321 2 347999999998731
Q ss_pred CCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccc-cchhhhcCchhHhhhcCccEEEEecc
Q 018243 129 KGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARI-FNAAVALGVPVRRLVQAADSASVCLS 206 (359)
Q Consensus 129 ~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~-~~~~~~~~~~~~~~~~~~d~~~~s~~ 206 (359)
. +++++|+++++.+||||. ..+.+++++|.++|++||+++|+||+|. ++..+ ............|++ ++|
T Consensus 202 ~-----~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g-~~~~~~~~~~~~d~~--t~s 273 (429)
T 1s0a_A 202 R-----HEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTG-KLFACEHAEIAPDIL--CLG 273 (429)
T ss_dssp T-----TTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTS-SSSGGGGGTCCCSEE--EEC
T ss_pred C-----CCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccc-hHHHhhhcCCCCCEE--Eec
Confidence 0 357777774442779996 5567889999999999999999999985 32111 111112122245655 677
Q ss_pred ccCCCc-ee-eEEecCHHHHHHHHHHH--H-hhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC---
Q 018243 207 KGLGAP-VG-SVIVGSKEFIKKARRLR--K-TLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL--- 277 (359)
Q Consensus 207 K~~g~~-~g-g~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~--- 277 (359)
|+++++ .+ |++++++++++.+.... . ..+.++..+++.++++..+++...+ ...++..++++++.+.|+++
T Consensus 274 K~l~~G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~ 353 (429)
T 1s0a_A 274 KALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDA 353 (429)
T ss_dssp GGGGTSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGGC
T ss_pred ccccCCCccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 999765 44 88888988887764310 0 1234454566666677777754322 35567778888999988875
Q ss_pred CCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 278 KGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 278 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
|++... +..++++++.++.. .+..++.+.|.++||.+.+.+ .++|++++...+++++++++++|+++++++.
T Consensus 354 ~~~~~~--~~~g~~~~~~~~~~--~~~~~l~~~l~~~Gi~v~~~~-~~iRis~~~~~t~e~i~~~~~~l~~~~~~~~ 425 (429)
T 1s0a_A 354 EMVADV--RVLGAIGVVETTHP--VNMAALQKFFVEQGVWIRPFG-KLIYLMPPYIILPQQLQRLTAAVNRAVQDET 425 (429)
T ss_dssp TTEEEE--EEETTEEEEEESSC--BCHHHHHHHHHHTTEECCCBT-TEEEECCCTTCCHHHHHHHHHHHHHHTSSGG
T ss_pred CCEEEE--EEeeEEEEEEECCc--ccHHHHHHHHHHCCCEEeccC-CEEEEECCCCCCHHHHHHHHHHHHHHHHhhh
Confidence 555432 23567888888642 356789999989999998864 7899999889999999999999999887653
No 149
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.97 E-value=1.7e-30 Score=231.91 Aligned_cols=325 Identities=11% Similarity=0.060 Sum_probs=220.3
Q ss_pred cccccccCCCC---C---ChHHHHHHHHHcCCC--CCCccCCChHHHHHHHHHHHHhCC--------CCeEE--cCCchH
Q 018243 3 TRTVDLRSDTV---T---KPTEAMRAAMASAEV--DDDVLMHDPTAFRLETEMAKVMGK--------EAGLF--VPSGTM 64 (359)
Q Consensus 3 ~~~id~~~~~~---~---~~~~~~~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~~~--------~~~~~--~~~gt~ 64 (359)
+.+|||.++.+ . .|+|.+.+++.+... ....|+..++..++++.++++++. +..++ ++||++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~ 105 (396)
T 2q7w_A 26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTG 105 (396)
T ss_dssp --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHH
T ss_pred CCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchh
Confidence 35789999863 1 445888888876422 233466667789999999999822 22344 788888
Q ss_pred HHHHHHHHhh-hhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEE
Q 018243 65 GNLISVLVHC-ETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLIC 141 (359)
Q Consensus 65 a~~~~l~~~~-~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~ 141 (359)
|+..++..+. ..+||+|+++.|+|.+... .++..|.+++.++.+ +++.+|++++++.+++.. +++++++
T Consensus 106 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-----~~~~~v~ 177 (396)
T 2q7w_A 106 ALRVAADFLAKNTSVKRVWVSNPSWPNHKS---VFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQ-----AGDVVLF 177 (396)
T ss_dssp HHHHHHHHHHHHSCCCEEEEEESCCTHHHH---HHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCC-----TTCEEEE
T ss_pred hHHHHHHHHHHhCCCCEEEEcCCCchhHHH---HHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCC-----CCCEEEE
Confidence 9988887654 2489999999999887553 367778888888764 567789999999998420 2456666
Q ss_pred EeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh--cCchhHhhhc-C-ccEEEEeccccCCCcee--e
Q 018243 142 LENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA--LGVPVRRLVQ-A-ADSASVCLSKGLGAPVG--S 215 (359)
Q Consensus 142 i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~--~~~~~~~~~~-~-~d~~~~s~~K~~g~~~g--g 215 (359)
+ +.++||||.+++.+++++|+++|++||+++|+||+|....... ...+...+.. . ..+++.|+||.+|.++. |
T Consensus 178 ~-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG 256 (396)
T 2q7w_A 178 H-GCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVG 256 (396)
T ss_dssp E-CSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCE
T ss_pred e-CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccc
Confidence 6 6667799999999999999999999999999999975433221 1123333321 2 23556699999985432 7
Q ss_pred EEec---CHH----HHHHHHHHHHhhCCCcchhHHHHHHHHHHHH---------HhHHHHhhhHHHHHHHHHHHHhcCC-
Q 018243 216 VIVG---SKE----FIKKARRLRKTLGGGMRQVGVLCAAALVALQ---------ENVLVMLDGDHKKAKLLAEGLNQLK- 278 (359)
Q Consensus 216 ~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---------~~~~~~~~~~~~~~~~l~~~l~~~~- 278 (359)
+++. +++ +.+.+.........+ .+...+.++..+++ +..++..+++.++++++.+.|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 334 (396)
T 2q7w_A 257 ACTLVAADSETVDRAFSQMKAAIRANYSN--PPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGA 334 (396)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHHTTTSS--CCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTC
T ss_pred eEEEEcCCHHHHHHHHHHHHHHHhhccCC--CCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 7764 564 444443322221112 13344444444442 3444466678888999999999882
Q ss_pred --CceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 279 --GLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 279 --g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
++++.. +..+.++|+.++. ..+.+.|.++||.+.++ +|++++ ..+++++++++++|++++
T Consensus 335 ~~~~~~~~-~~~~~~~~~~~~~------~~~~~~l~~~gv~v~~~----~Ris~~-~~~~e~i~~~~~~l~~~l 396 (396)
T 2q7w_A 335 NRDFSFII-KQNGMFSFSGLTK------EQVLRLREEFGVYAVAS----GRVNVA-GMTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp CSCCTHHH-HCCSSEEECCCCH------HHHHHHHHHHCEECCTT----CEEEGG-GCCTTTHHHHHHHHHHHC
T ss_pred CCCcceec-CCCceEEEecCCH------HHHHHHHHhcCeeecCC----ceEEEe-ecCHHHHHHHHHHHHhcC
Confidence 266533 3456677765532 35666678899999874 699997 348999999999998753
No 150
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.97 E-value=2.5e-30 Score=225.49 Aligned_cols=301 Identities=14% Similarity=0.069 Sum_probs=217.0
Q ss_pred ccccccCCCCC-ChHHHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHhC---CC--CeEEcCCchHHHHHHHHHhhh
Q 018243 4 RTVDLRSDTVT-KPTEAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVMG---KE--AGLFVPSGTMGNLISVLVHCE 75 (359)
Q Consensus 4 ~~id~~~~~~~-~~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~---~~--~~~~~~~gt~a~~~~l~~~~~ 75 (359)
.+|||.++.+. ++++.+.+++.+.... ...|.. +...++++.++++++ .+ ..++++||++++..++..+
T Consensus 20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~~~-- 96 (335)
T 1uu1_A 20 DKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF-- 96 (335)
T ss_dssp CSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHHHS--
T ss_pred cceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHHHh--
Confidence 46899998774 4569999999886522 223433 357899999999999 43 3466667778888777776
Q ss_pred hcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecC
Q 018243 76 TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLS 155 (359)
Q Consensus 76 ~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~ 155 (359)
|++|+++ |+|.+... .++..|.+++.++.++++.+|++++ . ++++|+++++ +||||.+++
T Consensus 97 --gd~Vl~~-p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l----~---------~~~~v~l~~p-~nptG~~~~ 156 (335)
T 1uu1_A 97 --DRSVFFP-PTYSCYRI---FAKAVGAKFLEVPLTKDLRIPEVNV----G---------EGDVVFIPNP-NNPTGHVFE 156 (335)
T ss_dssp --SEEEECS-SSCHHHHH---HHHHHTCEEEECCCCTTSCCCCCCC----C---------TTEEEEEESS-CTTTCCCCC
T ss_pred --CCcEEEC-CCcHHHHH---HHHHcCCeEEEeccCCCCCCCHHHc----C---------CCCEEEEeCC-CCCCCCCCC
Confidence 7899999 99877553 3667788998888776667776665 2 4678888666 679999999
Q ss_pred hhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh-h-cCccEEEEeccccCCCce-e-eEEecCHHHHHHHHHHH
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL-V-QAADSASVCLSKGLGAPV-G-SVIVGSKEFIKKARRLR 231 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~-~~~d~~~~s~~K~~g~~~-g-g~~~~~~~~~~~~~~~~ 231 (359)
.+++.+++++| | ++|+|++|..+.. + +.... . .+.++++.|+||++|.++ . |++++++++.+.++...
T Consensus 157 ~~~l~~l~~~~---~-~li~De~~~~~~~---~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~ 228 (335)
T 1uu1_A 157 REEIERILKTG---A-FVALDEAYYEFHG---E-SYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVR 228 (335)
T ss_dssp HHHHHHHHHTT---C-EEEEECTTHHHHC---C-CCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHS
T ss_pred HHHHHHHHHhC---C-EEEEECcchhhcc---h-hHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhc
Confidence 77777777766 7 8999999753221 1 11121 1 134466779999998543 2 88888999988877654
Q ss_pred HhhCCCcchhHHHHHHHHHHHHH--hHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHH
Q 018243 232 KTLGGGMRQVGVLCAAALVALQE--NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLK 309 (359)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (359)
..+ ..+...+.++..+++. +.++.+++..++++++.+.|+++ |+.+. +..++++|+.++. .+..++.+
T Consensus 229 ~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~---~~~~~~~~ 298 (335)
T 1uu1_A 229 LPF----NVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYRIT--DSRGNFVFVFMEK---EEKERLLE 298 (335)
T ss_dssp CTT----CSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC--CCCSSEEEEECCT---HHHHHHHH
T ss_pred CCC----CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CcEEc--CCCCeEEEEECCC---CCHHHHHH
Confidence 332 2344445555555543 44556777888899999999988 77653 3467889988864 46778999
Q ss_pred HHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018243 310 KLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 310 ~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
.|.++||.+.+ ..+++|++++ +++++++++++|+++
T Consensus 299 ~l~~~gi~v~~-~~~~iRis~~---~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 299 HLRTKNVAVRS-FREGVRITIG---KREENDMILRELEVF 334 (335)
T ss_dssp HHHHHTEEEEE-ETTEEEEECC---CHHHHHHHHHHHHCC
T ss_pred HHHHCCEEEEE-CCCeEEEEeC---CHHHHHHHHHHHHhh
Confidence 99889999988 4578999984 467899999988753
No 151
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.97 E-value=3.3e-29 Score=225.04 Aligned_cols=329 Identities=17% Similarity=0.146 Sum_probs=219.8
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCCCC--------ccCCChHHHHHH----HHHHHHhCCCCe-EEcCCchHHHHHHHH
Q 018243 5 TVDLRSDTVTKPTEAMRAAMASAEVDDD--------VLMHDPTAFRLE----TEMAKVMGKEAG-LFVPSGTMGNLISVL 71 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~~~~~~~~l~----~~la~~~~~~~~-~~~~~gt~a~~~~l~ 71 (359)
.++|.++... ++|.+.+++.+...... .|...+....++ +.+++++|.+.. +++++|++|+..++.
T Consensus 27 ~i~l~~~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~~sGt~a~~~~~~ 105 (417)
T 3n0l_A 27 GLEMIASENF-TLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANVQPNSGSQANQGVYA 105 (417)
T ss_dssp SEECCTTCCC-CCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHH
T ss_pred CeeeecccCC-CCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCCCCcceEeccHHHHHHHHHH
Confidence 4556543332 36889999887652221 233334444444 488999999876 888999999999999
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCC--ccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC
Q 018243 72 VHCETRGSEVILGDNSHIHIYENGGISTIGG--VHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC 149 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p 149 (359)
+++ ++||+|+++.++|.+....+......| ..++.++.+.++.+|+++|++.+++ +++++|++.+ ++|
T Consensus 106 ~~~-~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~-------~~~~~v~~~~-~~~- 175 (417)
T 3n0l_A 106 ALI-NPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKK-------EKPKLIVCGA-SAY- 175 (417)
T ss_dssp HHS-CTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHH-------HCCSEEEECC-SSC-
T ss_pred Hhc-CCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHh-------cCCeEEEECC-ccc-
Confidence 987 599999999999876543222233333 3345555666788999999999984 4688888744 343
Q ss_pred CceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecC-HHHHHHHH
Q 018243 150 GGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGS-KEFIKKAR 228 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~-~~~~~~~~ 228 (359)
|...+ +++|.++|++||+++|+|++|..+... .+.....+ ...|+++.|+||+++++.||+++++ +++.+.++
T Consensus 176 -G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~-~~~~~~~~-~~~di~~~s~sK~l~g~~~G~~~~~~~~~~~~~~ 249 (417)
T 3n0l_A 176 -ARVID---FAKFREIADEIGAYLFADIAHIAGLVV-AGEHPSPF-PYAHVVSSTTHKTLRGPRGGIIMTNDEELAKKIN 249 (417)
T ss_dssp -CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHH-TTSSCCCT-TTCSEEEEESSTTTCSCSCEEEEESCHHHHHHHH
T ss_pred -CccCC---HHHHHHHHHHcCCEEEEECccchhhhh-cccCCCcc-ccceEEEeeCccccCCCCeeEEEECCHHHHHHHh
Confidence 77776 899999999999999999998655443 22211112 2578999999999977777888887 78888876
Q ss_pred HHHHhhCCCcchhHHHHHHHHHHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHH
Q 018243 229 RLRKTLGGGMRQVGVLCAAALVAL----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYA 304 (359)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (359)
........+. ......++...++ +...++.+++..++++++.+.|++. |+.+...+..++++|+.+.. .+.+.
T Consensus 250 ~~~~~~~~~~-~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~~~ 326 (417)
T 3n0l_A 250 SAIFPGIQGG-PLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR-KFKLVSDGTDNHLVLMSFLD-REFSG 326 (417)
T ss_dssp HHHTTTTCSS-CCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTT-SSSCH
T ss_pred hhhCCcccCC-cHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCceEEEEEccc-CCCCH
Confidence 5544322211 1222222222223 2333457777888899999999985 88875434467788888764 23467
Q ss_pred HHHHHHHHhcCceeccC----------CCcEEEEEeCC----CCCHHHHHHHHHHHHHHHHHH
Q 018243 305 ACLLKKLEEHGVLVMPE----------SSTRVRIVVHH----QISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 305 ~~~~~~l~~~gi~~~~~----------~~~~lRi~~~~----~~~~~~i~~~~~~l~~~~~~~ 353 (359)
..+.+.|.++||.+.+. ....+|+++.. .++++++++++++|++++++.
T Consensus 327 ~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 389 (417)
T 3n0l_A 327 KDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDV 389 (417)
T ss_dssp HHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 78888899999998532 23569998642 367899999999999998654
No 152
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.97 E-value=6.1e-30 Score=230.56 Aligned_cols=319 Identities=17% Similarity=0.091 Sum_probs=207.2
Q ss_pred hHHHHHHHHHcCCCCCC--------ccCCChHHHHHH----HHHHHHhCCCC----e-EEcCCchHHHHHHHHHhhhhcC
Q 018243 16 PTEAMRAAMASAEVDDD--------VLMHDPTAFRLE----TEMAKVMGKEA----G-LFVPSGTMGNLISVLVHCETRG 78 (359)
Q Consensus 16 ~~~~~~~a~~~~~~~~~--------~~~~~~~~~~l~----~~la~~~~~~~----~-~~~~~gt~a~~~~l~~~~~~~g 78 (359)
++|++++++.+...+.. .|+..+...++| +.++++||.+. + ++++||++|+..++.+++ ++|
T Consensus 66 ~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~-~pG 144 (490)
T 2a7v_A 66 CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALL-QPH 144 (490)
T ss_dssp CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHC-CSC
T ss_pred CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHc-CCC
Confidence 56999999987654332 123334344565 88999999987 3 556799999999999998 599
Q ss_pred CeEEecCCCcceeecccc-----ccccCCcc--ceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018243 79 SEVILGDNSHIHIYENGG-----ISTIGGVH--PRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 79 ~~vl~~~~~~~~~~~~~~-----~~~~~g~~--~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
|+|+++++.|.+.+..+. ...+.|.. ++.++.+ +++.+|+++|++.++. .++++|++ +.++||
T Consensus 145 D~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~-------~~~klIi~-~~s~~~- 215 (490)
T 2a7v_A 145 DRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARL-------FRPRLIIA-GTSAYA- 215 (490)
T ss_dssp EECCC-------------------------------CCBCTTTCSBCHHHHHHHHHH-------HCCSEEEE-CCSSCC-
T ss_pred CEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhh-------cCCcEEEE-cCCCCC-
Confidence 999999998865432111 12344543 3344444 5688999999999973 36778877 444445
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHH--------
Q 018243 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKE-------- 222 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~-------- 222 (359)
... ++++|+++|++||+++++|++|..|... .+....++ .++|++++|+||+|++|.||+++++++
T Consensus 216 -~~~---dl~~i~~ia~~~g~~livD~Ah~~glv~-~g~~~~~~-~~aDiv~~S~hK~l~Gp~GG~i~~~~~~~~~~~~~ 289 (490)
T 2a7v_A 216 -RLI---DYARMREVCDEVKAHLLADMAHISGLVA-AKVIPSPF-KHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKT 289 (490)
T ss_dssp -SCC---CHHHHHHHHHHTTCEEEEECGGGHHHHH-TTSSCCGG-GTCSEEEEESSGGGCSCSCEEEEEECSEEEEETTT
T ss_pred -Ccc---cHHHHHHHHHHcCCEEEEcccccccccc-CCcCCCCC-CCCCEEEECCcccCccccchheeeccchhcccccc
Confidence 333 4899999999999999999999776543 23222233 378999999999998888898887653
Q ss_pred -------HHHHHHHHHHhhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceE
Q 018243 223 -------FIKKARRLRKTLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNI 291 (359)
Q Consensus 223 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~ 291 (359)
+.++++........+......+ ++...++. ...+++.++..+++++|++.|++. |+++..++...++
T Consensus 290 ~~~~~~~l~~~i~~~~~~g~qggp~~~~i-aAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~-G~~v~~~~t~t~l 367 (490)
T 2a7v_A 290 GREIPYTFEDRINFAVFPSLQGGPHNHAI-AAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHL 367 (490)
T ss_dssp EEEEECCCHHHHHHHHTTTTCCSCCHHHH-HHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred cchhhHHHHHHHHHHhcccCCCCchHHHH-HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCCCeE
Confidence 4455543322211111112222 22222332 222447778889999999999998 9998654446778
Q ss_pred EEEEeccchHHHHHHHHHHHHhcCceec----cC-----CCcEEEEEe----CCCCCHHHHHHHHHHHHHHHHHH
Q 018243 292 VYFEITEDSKLYAACLLKKLEEHGVLVM----PE-----SSTRVRIVV----HHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~l~~~gi~~~----~~-----~~~~lRi~~----~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+++.+.. .+.+..++.+.|.+.||.+. |+ .+..||++. +.+.+++|++++++.|.++++..
T Consensus 368 v~vdl~~-~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~~ 441 (490)
T 2a7v_A 368 VLVDLRP-KGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIG 441 (490)
T ss_dssp EEEECTT-TTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCC-CCCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHhh
Confidence 8998875 34567888999999999984 33 346799954 44689999999999999988643
No 153
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.97 E-value=7.7e-29 Score=223.21 Aligned_cols=329 Identities=17% Similarity=0.139 Sum_probs=212.4
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCCCC--------ccCCCh---HHHH-HHHHHHHHhCCCCe-EEcCCchHHHHHHHH
Q 018243 5 TVDLRSDTVTKPTEAMRAAMASAEVDDD--------VLMHDP---TAFR-LETEMAKVMGKEAG-LFVPSGTMGNLISVL 71 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~~~~---~~~~-l~~~la~~~~~~~~-~~~~~gt~a~~~~l~ 71 (359)
.++|..+.... +|.+.+++.+...... .|.... ...+ .++.+++++|.+.. ++++||++|+..++.
T Consensus 34 ~i~l~~~~~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~v~~~~Gs~a~~~al~ 112 (425)
T 3ecd_A 34 QVELIASENIV-SRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNAGHANVQPHSGAQANGAVML 112 (425)
T ss_dssp SEECCTTCCCC-CHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHH
T ss_pred ceeeecccCCC-CHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCCCCceeecCchHHHHHHHHH
Confidence 35565443333 7899999987653211 111111 2233 34778899999877 559999999999999
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCccc--eeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccC
Q 018243 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGVHP--RTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHAN 148 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~--~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ 148 (359)
+++ ++||+|+++.++|.+....+......|..+ +.++.+ +++.+|+++|++.+++ +++++|+++++ +|
T Consensus 113 ~~~-~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~-------~~~~~v~~~~~-~~ 183 (425)
T 3ecd_A 113 ALA-KPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQ-------HKPSLIIAGFS-AY 183 (425)
T ss_dssp HHC-CTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHH-------HCCSEEEEECS-CC
T ss_pred Hcc-CCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhh-------cCCcEEEEccc-cC
Confidence 887 599999999999877332122233445433 344444 3478899999999974 47889998654 44
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecC-HHHHHHH
Q 018243 149 CGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGS-KEFIKKA 227 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~-~~~~~~~ 227 (359)
| .. .++++|.++|++||+++|+|++|..+... .+.....+ ...|+++.|+||+++++.||+++++ +.+.+.+
T Consensus 184 ~--~~---~~l~~i~~l~~~~~~~li~De~~~~g~~~-~~~~~~~~-~~~di~~~s~sK~l~g~~~g~~~~~~~~~~~~~ 256 (425)
T 3ecd_A 184 P--RK---LDFARFRAIADSVGAKLMVDMAHIAGVIA-AGRHANPV-EHAHVVTSTTHKTLRGPRGGFVLTNDEEIAKKI 256 (425)
T ss_dssp C--SC---CCHHHHHHHHHHHTCEEEEECGGGHHHHH-TTSSCCGG-GTCSEEEEESSGGGCCCSCEEEEESCHHHHHHH
T ss_pred C--Cc---CCHHHHHHHHHHcCCEEEEECcChHhhhh-cccccCch-hcCcEEEecCCcccCCCCcEEEEeCCHHHHHHH
Confidence 4 33 35899999999999999999998665543 22222222 2478889999999977777888886 6677766
Q ss_pred HHHHHhhCCCcchhHHHHHHHHHHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHH
Q 018243 228 RRLRKTLGGGMRQVGVLCAAALVAL----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLY 303 (359)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 303 (359)
.........+.. .....++...++ ....++..++..++++++.+.|++. |+++..++..++++++.++. .+.+
T Consensus 257 ~~~~~~~~~~~~-~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~~ 333 (425)
T 3ecd_A 257 NSAVFPGLQGGP-LMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTDNHLLLVDLRP-KGLK 333 (425)
T ss_dssp HHHHC-----CC-CHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGG-GTCC
T ss_pred HhhhCccccCCc-cHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCceEEEEEeCC-CCCC
Confidence 544332211111 222222222222 2334457778888999999999997 88876544567888888864 2346
Q ss_pred HHHHHHHHHhcCceec----cC------CCcEEEEEe----CCCCCHHHHHHHHHHHHHHHHHH
Q 018243 304 AACLLKKLEEHGVLVM----PE------SSTRVRIVV----HHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 304 ~~~~~~~l~~~gi~~~----~~------~~~~lRi~~----~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
...+.+.|.++||.+. |+ ...++|+++ ...++++++++++++|++++++.
T Consensus 334 ~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 334 GAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp HHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 7788889999999987 43 124799984 33456999999999999998876
No 154
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.97 E-value=8.3e-30 Score=227.51 Aligned_cols=282 Identities=19% Similarity=0.188 Sum_probs=210.3
Q ss_pred CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCC
Q 018243 36 HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDG 114 (359)
Q Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 114 (359)
..|...++++.+++++|.+.+++++||++|+..++.+++ ++||+|+++++.|.+.+... ......|++++.++.+
T Consensus 80 ~~p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~al~-~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~--- 155 (430)
T 3ri6_A 80 SNPTVEDLEQRLKNLTGALGVLALGSGMAAISTAILTLA-RAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM--- 155 (430)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHC-CTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTT---
T ss_pred CCHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC---
Confidence 368889999999999999989999999999999999887 59999999999998766411 1345678899888766
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh
Q 018243 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
|++++++.++ +++++|+++++.| |||.+.+ +++|.++|+++|+++|+|++++.+.. ..+.
T Consensus 156 --d~~~l~~ai~--------~~t~~v~~e~p~N-ptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~------~~~~ 215 (430)
T 3ri6_A 156 --DSLAVEHACD--------ETTKLLFLETISN-PQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYL------LEAK 215 (430)
T ss_dssp --CHHHHHHHCC--------TTEEEEEEESSCT-TTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTT------CCGG
T ss_pred --CHHHHHHhhC--------CCCeEEEEECCCC-CCCeecC---HHHHHHHHHHcCCEEEEECCCccccc------CChH
Confidence 9999999998 7899999966555 9999987 88999999999999999999754332 1222
Q ss_pred hcCccEEEEeccccCCCc---eeeEEe--cCHHH------------------HHHHHH-HHHhhCCCcchhHHHHHHHHH
Q 018243 195 VQAADSASVCLSKGLGAP---VGSVIV--GSKEF------------------IKKARR-LRKTLGGGMRQVGVLCAAALV 250 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~---~gg~~~--~~~~~------------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 250 (359)
..++|+++.|+||+++++ .||+++ .+..+ +.+.+. .....+... ++..++.+..
T Consensus 216 ~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~--~~~~a~l~l~ 293 (430)
T 3ri6_A 216 RLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSL--SPHNAYLQSL 293 (430)
T ss_dssp GGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCC--CHHHHHHHHH
T ss_pred HcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCC--CHHHHHHHHh
Confidence 347899999999999875 567777 33222 222221 223445544 5566666666
Q ss_pred HHHHhHHHHhhhHHHHHHHHHHHHhcCCCce-EecCC--------------ccce-EEEEEeccchHHHHHHHHHHHHhc
Q 018243 251 ALQENVLVMLDGDHKKAKLLAEGLNQLKGLR-VDVDA--------------VETN-IVYFEITEDSKLYAACLLKKLEEH 314 (359)
Q Consensus 251 ~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~~--------------~~~~-~~~~~~~~~~~~~~~~~~~~l~~~ 314 (359)
+++.... ++++..+++..+.+.|++.|+++ +..|. ..+. +++|.++. ..++.+|.+.|+..
T Consensus 294 ~l~~l~~-r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~--~~~~~~~~~~l~~~ 370 (430)
T 3ri6_A 294 GLETMAL-RIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELES--KEASYRFMDALKLI 370 (430)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS--HHHHHHHHHHCSSS
T ss_pred hhhhHHH-HHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC--HHHHHHHHHhCCcc
Confidence 6766554 77888899999999999998887 43332 1255 89999974 34777888888665
Q ss_pred CceeccC---------------------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 315 GVLVMPE---------------------------SSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 315 gi~~~~~---------------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
++.+..| .++.||+++. .|+.+++++.|++++
T Consensus 371 ~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG----~E~~~dl~~dl~~al 429 (430)
T 3ri6_A 371 RRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVG----IEEIEDLKEDILQAL 429 (430)
T ss_dssp EECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECC----SSCHHHHHHHHHHHH
T ss_pred eecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHhh
Confidence 5544322 2456999985 467777888887765
No 155
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.2e-29 Score=229.41 Aligned_cols=330 Identities=18% Similarity=0.142 Sum_probs=223.2
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCCCC--c------cCCChHH---HHHH-HHHHHHhCCCCeEE-cCCchHHHHHHHH
Q 018243 5 TVDLRSDTVTKPTEAMRAAMASAEVDDD--V------LMHDPTA---FRLE-TEMAKVMGKEAGLF-VPSGTMGNLISVL 71 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~~~--~------~~~~~~~---~~l~-~~la~~~~~~~~~~-~~~gt~a~~~~l~ 71 (359)
.|+|.++. ..++|++.+++.+...+.. . |...+.. .++. +.+++++|.+...+ ++||++|+..++.
T Consensus 47 ~i~l~~~~-~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~~~~v~~~sGs~a~~~a~~ 125 (447)
T 3h7f_A 47 TLEMIASE-NFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEFANVQPHSGAQANAAVLH 125 (447)
T ss_dssp SEECCTTC-CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHH
T ss_pred ceeEecCC-CCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCCceEEEeCCHHHHHHHHHH
Confidence 45664433 3347899999987553211 1 2222333 3333 88999999987755 8999999999999
Q ss_pred HhhhhcCCeEEecCCCcceeeccccccccCCc--cceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccC
Q 018243 72 VHCETRGSEVILGDNSHIHIYENGGISTIGGV--HPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHAN 148 (359)
Q Consensus 72 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ 148 (359)
+++ ++||+|++++++|.+.+..+......|. .++.++.+ +++.+|++++++.+++ .++++|++.+ ++|
T Consensus 126 ~~~-~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~-------~~~~~i~~~~-~~~ 196 (447)
T 3h7f_A 126 ALM-SPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALE-------FRPKVIIAGW-SAY 196 (447)
T ss_dssp HHC-CTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHH-------HCCSEEEEEC-SSC
T ss_pred Hhc-CCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHh-------cCCeEEEEcC-CCC
Confidence 888 5999999999998774321211223333 33444443 4577999999999963 4677888744 444
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHH
Q 018243 149 CGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKAR 228 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~ 228 (359)
|++. ++++|+++|++||+++|+|++|..+... .+.....+ ..+|+++.|+||++++|.||++++++++.+.++
T Consensus 197 ~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~-~g~~~~~~-~~~di~~~s~sK~l~G~~gG~i~~~~~~~~~l~ 269 (447)
T 3h7f_A 197 PRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVA-AGLHPSPV-PHADVVSTTVHKTLGGGRSGLIVGKQQYAKAIN 269 (447)
T ss_dssp CSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHH-TTSSCCST-TTCSEEEEESSGGGCCCSCEEEEECGGGHHHHH
T ss_pred CCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhc-CCCCCCCC-CCCcEEEecCCcCCCCCCeEEEEECHHHHHHHh
Confidence 7665 5899999999999999999998655432 22211112 367899999999998888899999998888876
Q ss_pred HHHHhhCCCcchhHHHHHHHHHHH----HHhHHHHhhhHHHHHHHHHHHHhcC----CCceEecCCccceEEEEEeccch
Q 018243 229 RLRKTLGGGMRQVGVLCAAALVAL----QENVLVMLDGDHKKAKLLAEGLNQL----KGLRVDVDAVETNIVYFEITEDS 300 (359)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~----~g~~~~~~~~~~~~~~~~~~~~~ 300 (359)
........+....... ++...++ +...++.+++..++++++.+.|++. +|+++...+..++++++.+.. .
T Consensus 270 ~~~~~~~~~~~~~~~~-~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~ 347 (447)
T 3h7f_A 270 SAVFPGQQGGPLMHVI-AGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRD-S 347 (447)
T ss_dssp HHHTTTTCSSCCHHHH-HHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTT-S
T ss_pred hhcCCcccCCccHHHH-HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCC-C
Confidence 5543322222212212 2222222 2233447778888999999999876 588875444567788888764 2
Q ss_pred HHHHHHHHHHHHhcCceec----cC------CCcEEEEEeCCC----CCHHHHHHHHHHHHHHHHHH
Q 018243 301 KLYAACLLKKLEEHGVLVM----PE------SSTRVRIVVHHQ----ISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 301 ~~~~~~~~~~l~~~gi~~~----~~------~~~~lRi~~~~~----~~~~~i~~~~~~l~~~~~~~ 353 (359)
+.+...+.+.|.++||.+. ++ .+.++|+++... ++++++++++++|++++++.
T Consensus 348 ~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~~ 414 (447)
T 3h7f_A 348 PLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALATG 414 (447)
T ss_dssp SCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHSG
T ss_pred CCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 3456677777888899986 33 346799986432 67999999999999988654
No 156
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.97 E-value=4.4e-29 Score=226.66 Aligned_cols=312 Identities=17% Similarity=0.164 Sum_probs=216.5
Q ss_pred CCCccCCChHHHHHHHHH----HHHhCCC-----------CeEEcCCchHHHHHHHHHhhhh------------------
Q 018243 30 DDDVLMHDPTAFRLETEM----AKVMGKE-----------AGLFVPSGTMGNLISVLVHCET------------------ 76 (359)
Q Consensus 30 ~~~~~~~~~~~~~l~~~l----a~~~~~~-----------~~~~~~~gt~a~~~~l~~~~~~------------------ 76 (359)
+...|..+|...++|+.+ ++++|.+ .+++++|||+|++.++.+++.+
T Consensus 101 ~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~ 180 (475)
T 3k40_A 101 IGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTIL 180 (475)
T ss_dssp CSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHH
T ss_pred cccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCccccccccc
Confidence 344577788888888775 5667776 3589999999999999987532
Q ss_pred cCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecCh
Q 018243 77 RGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSV 156 (359)
Q Consensus 77 ~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~ 156 (359)
+++.|+++..+|.+..+ + +...|++++.++.+.++ +|+++|++.|++.... ...+.+|++ +..+|++|.+-+
T Consensus 181 ~~~~vi~s~~~H~s~~~-~--~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~--~~~~~~v~~-~~~~t~~G~~~~- 252 (475)
T 3k40_A 181 GKLVGYCSDQAHSSVER-A--GLLGGVKLRSVQSENHR-MRGAALEKAIEQDVAE--GLIPFYAVV-TLGTTNSCAFDY- 252 (475)
T ss_dssp HHEEEEEETTSCHHHHH-H--HHHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHT--TCEEEEEEE-EBSCTTTCCBCC-
T ss_pred CCeEEEECCCchHHHHH-H--HHHcCCceEEEECCCCC-cCHHHHHHHHHHHHHC--CCccEEEEE-EecCCCCcCcCC-
Confidence 23579999999999876 3 66789999999988889 9999999999831100 012556666 445568999755
Q ss_pred hhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh---hcCccEEEEeccccCCCcee-eEEec-CHHHHH-HHHHH
Q 018243 157 EYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL---VQAADSASVCLSKGLGAPVG-SVIVG-SKEFIK-KARRL 230 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~~d~~~~s~~K~~g~~~g-g~~~~-~~~~~~-~~~~~ 230 (359)
+++|.++|++||+++|+|++|+.+.... ...... ...+|++++++||+++.|.| |+++. +++... .+...
T Consensus 253 --l~~I~~la~~~~~~lhvD~A~~~~~~~~--~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~ 328 (475)
T 3k40_A 253 --LDECGPVGNKHNLWIHVDAAYAGSAFIC--PEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVD 328 (475)
T ss_dssp --HHHHHHHHHHTTCEEEEECTTGGGGGGS--GGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC-------
T ss_pred --HHHHHHHHHHhCCeEEEeHHhHHHHHhC--HhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCC
Confidence 8999999999999999999986654421 111111 13579999999999988876 55544 444422 21111
Q ss_pred HHhh----------------CCCcchhHHHHHHHHHHH-HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEE
Q 018243 231 RKTL----------------GGGMRQVGVLCAAALVAL-QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVY 293 (359)
Q Consensus 231 ~~~~----------------~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~ 293 (359)
..+. ..+.+.......+++..+ .+..+++.++..++++++.+.|+++|++++..+ ...++++
T Consensus 329 ~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~-~~~~iv~ 407 (475)
T 3k40_A 329 PLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAE-INMGLVC 407 (475)
T ss_dssp --------------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSC-CBTTEEE
T ss_pred ccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC-CceEEEE
Confidence 0110 011111122222333333 234455778889999999999999999998644 4778889
Q ss_pred EEeccchHHHHHHHHHHHHhcCcee-c---cCCCcEEEEEeC-CCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 294 FEITEDSKLYAACLLKKLEEHGVLV-M---PESSTRVRIVVH-HQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 294 ~~~~~~~~~~~~~~~~~l~~~gi~~-~---~~~~~~lRi~~~-~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
|.++.. .....++.++|.++|+.. . ..+...+|+++. +.++++++++++++|+++.+++..
T Consensus 408 f~~~~~-~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~~ 473 (475)
T 3k40_A 408 FRLKGS-NERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADEMEQ 473 (475)
T ss_dssp EEESSC-HHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeCCc-hHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 988652 345678999997777654 2 235678999964 456899999999999999988754
No 157
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.97 E-value=3.7e-29 Score=227.77 Aligned_cols=312 Identities=16% Similarity=0.169 Sum_probs=218.8
Q ss_pred CCCccCCChHHHHHHHHH----HHHhCCCC------------eEEcCCchHHHHHHHHHhhhh-----------------
Q 018243 30 DDDVLMHDPTAFRLETEM----AKVMGKEA------------GLFVPSGTMGNLISVLVHCET----------------- 76 (359)
Q Consensus 30 ~~~~~~~~~~~~~l~~~l----a~~~~~~~------------~~~~~~gt~a~~~~l~~~~~~----------------- 76 (359)
+...|..+|...++|+.+ ++++|.+. +++++|||+|++.++.+++.+
T Consensus 106 ~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~ 185 (481)
T 4e1o_A 106 LGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSL 185 (481)
T ss_dssp CCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHH
T ss_pred ccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccc
Confidence 345577788888888876 45567653 488999999999999988642
Q ss_pred -cCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecC
Q 018243 77 -RGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLS 155 (359)
Q Consensus 77 -~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~ 155 (359)
+++.|+++..+|.+..+ + +.+.|.+++.++.++++.+|+++|++.|++.... ...+.+|++ +..+|+||.+-|
T Consensus 186 ~~~~~v~~s~~~H~s~~~-~--~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~--g~~~~~vv~-~~~~t~~G~id~ 259 (481)
T 4e1o_A 186 NARLVAYASDQAHSSVEK-A--GLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQR--GLVPVFVCA-TLGTTGVCAFDC 259 (481)
T ss_dssp HTTEEEEEETTSCHHHHH-H--HHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHT--TCEEEEEEE-EBSCTTTCCBCC
T ss_pred cCCeEEEEcCcchHHHHH-H--HHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhC--CCCcEEEEE-ecCCCCCcCcCC
Confidence 45688999999999776 3 5678889999998888999999999999831100 012566666 445668998644
Q ss_pred hhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh---hcCccEEEEeccccCCCcee-eEEe-cCHHHHHHHHHH
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL---VQAADSASVCLSKGLGAPVG-SVIV-GSKEFIKKARRL 230 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~~d~~~~s~~K~~g~~~g-g~~~-~~~~~~~~~~~~ 230 (359)
+++|.++|++||+++|+|+||+.+... ....... ...+|++++++||+++.|.| |+++ .++.........
T Consensus 260 ---l~~I~~la~~~~~~lhvDaA~g~~~~~--~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~ 334 (481)
T 4e1o_A 260 ---LSELGPICAREGLWLHIDAAYAGTAFL--CPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSV 334 (481)
T ss_dssp ---HHHHHHHHHHHTCEEEEECTTGGGGGG--SGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCC
T ss_pred ---HHHHHHHHHHcCCeEEeehhhHHHHHh--ChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcC
Confidence 999999999999999999997665433 1112111 13569999999999998877 5444 455544321100
Q ss_pred H-HhhC----------------CCcchhHHHHHHHHHHH-HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEE
Q 018243 231 R-KTLG----------------GGMRQVGVLCAAALVAL-QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIV 292 (359)
Q Consensus 231 ~-~~~~----------------~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~ 292 (359)
. .+.. .+.+.......+++..+ .+..+++.++..++++++.+.|+++|++++.. +...+++
T Consensus 335 ~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~-~~~~~~v 413 (481)
T 4e1o_A 335 NPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPA-KRHLGLV 413 (481)
T ss_dssp CCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCS-CCCSSEE
T ss_pred CchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCceeEE
Confidence 0 0100 01111122233333333 23445578888999999999999999999854 4478888
Q ss_pred EEEeccchHHHHHHHHHHHHhcCcee-cc---CCCcEEEEEeC-CCCCHHHHHHHHHHHHHHHHHHH
Q 018243 293 YFEITEDSKLYAACLLKKLEEHGVLV-MP---ESSTRVRIVVH-HQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~l~~~gi~~-~~---~~~~~lRi~~~-~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+|.++.. .....++.++|.++|+.. .+ .+...+|+++. +..+++++++++++|+++.+++.
T Consensus 414 ~f~~~~~-~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~l~ 479 (481)
T 4e1o_A 414 VFRLKGP-NSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLIL 479 (481)
T ss_dssp EEEESSC-HHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCc-hHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 9988652 345678999998778543 22 35678999964 45589999999999999988764
No 158
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.97 E-value=2.1e-30 Score=232.44 Aligned_cols=326 Identities=15% Similarity=0.071 Sum_probs=222.8
Q ss_pred cccccccCCCC---C---ChHHHHHHHHHc-CCCC--CCccCCChHHHHHHHHHHHHhCC--------CCeEE--cCCch
Q 018243 3 TRTVDLRSDTV---T---KPTEAMRAAMAS-AEVD--DDVLMHDPTAFRLETEMAKVMGK--------EAGLF--VPSGT 63 (359)
Q Consensus 3 ~~~id~~~~~~---~---~~~~~~~~a~~~-~~~~--~~~~~~~~~~~~l~~~la~~~~~--------~~~~~--~~~gt 63 (359)
...|||..+.+ . .+.+.+.+++.+ .... ...|+..++..++++.++++++. +..++ +++|+
T Consensus 29 ~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~ 108 (412)
T 1yaa_A 29 ATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGT 108 (412)
T ss_dssp SSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHH
T ss_pred CCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchH
Confidence 45789998765 2 345889998887 5432 23466667789999999999832 23456 77788
Q ss_pred HHHHHHH--HHhhhhcCCeEEecCCCcceeeccccccccCCccceeeec-C-CCCCCCHHHHHHHhcCCCCCccCCceeE
Q 018243 64 MGNLISV--LVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN-N-QDGTMDIDLIEAAIRDPKGEIVYPTTRL 139 (359)
Q Consensus 64 ~a~~~~l--~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 139 (359)
+|+..++ ...+ .+||+|+++.|+|.+... .++..|.+++.++. + +++.+|+++|++.+++. +..++
T Consensus 109 ~a~~~~~~~~~~~-~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~~~ 178 (412)
T 1yaa_A 109 GALHISAKFFSKF-FPDKLVYLSKPTWANHMA---IFENQGLKTATYPYWANETKSLDLNGFLNAIQKA------PEGSI 178 (412)
T ss_dssp HHHHHHHHHHHHH-CTTCCEEEEESCCTTHHH---HHHTTTCCEEEEECEETTTTEECHHHHHHHHHHS------CTTCE
T ss_pred hHHHHHHHHHHHh-CCCCEEEEeCCCCccHHH---HHHHcCceEEEEeeecCCCCccCHHHHHHHHHhC------CCCCE
Confidence 8888873 4444 489999999999887553 36677889998876 3 36778999999999731 12344
Q ss_pred EEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh---cCchhHhhh-cCc----cEEEEeccccCCC
Q 018243 140 ICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA---LGVPVRRLV-QAA----DSASVCLSKGLGA 211 (359)
Q Consensus 140 v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~---~~~~~~~~~-~~~----d~~~~s~~K~~g~ 211 (359)
+++.+.++||||.+++.+++++|+++|++||+++|+|++|....... ...+...+. ... ++++.|+||.+|.
T Consensus 179 ~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 258 (412)
T 1yaa_A 179 FVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGM 258 (412)
T ss_dssp EEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCC
T ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCC
Confidence 55546677799999999999999999999999999999974332211 112232322 133 3455699999985
Q ss_pred ce-e-eEEe--c-----CHH----HHHHHHHHHHhhCCCcchhHHHHHHHHHHHH---------HhHHHHhhhHHHHHHH
Q 018243 212 PV-G-SVIV--G-----SKE----FIKKARRLRKTLGGGMRQVGVLCAAALVALQ---------ENVLVMLDGDHKKAKL 269 (359)
Q Consensus 212 ~~-g-g~~~--~-----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---------~~~~~~~~~~~~~~~~ 269 (359)
++ . ||++ + +++ +.+.+.........+. +...+.++..+++ ...++.++++.+++++
T Consensus 259 ~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (412)
T 1yaa_A 259 YGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNP--PAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHA 336 (412)
T ss_dssp GGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSC--CHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCC--ChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 1 7776 6 565 6666655333222222 3333334444442 2445567778888999
Q ss_pred HHHHHhcCC---CceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHH
Q 018243 270 LAEGLNQLK---GLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCF 346 (359)
Q Consensus 270 l~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l 346 (359)
+.+.|+++. ++++.. +..+.++|+.++ ...+...|.++||.+.+ ++||+++ ..+++++++++++|
T Consensus 337 l~~~L~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~l~~~gi~v~~----~~Ris~~-~~~~~~i~~~~~~l 404 (412)
T 1yaa_A 337 LRDHLVKLGTPGNWDHIV-NQCGMFSFTGLT------PQMVKRLEETHAVYLVA----SGRASIA-GLNQGNVEYVAKAI 404 (412)
T ss_dssp HHHHHHHHTCSSCCTHHH-HCCSSEEECCCC------HHHHHHHHHHHCEECCT----TSEEEGG-GCCTTTHHHHHHHH
T ss_pred HHHHHHhhCCCCCeeeec-cCceEEEeeCCC------HHHHHHHHHhCCEEecc----CcEEEEc-cCCHhHHHHHHHHH
Confidence 999998873 366543 335666665443 23555555789999977 4799997 45899999999999
Q ss_pred HHHHHH
Q 018243 347 QKIYAG 352 (359)
Q Consensus 347 ~~~~~~ 352 (359)
+++++.
T Consensus 405 ~~~~~~ 410 (412)
T 1yaa_A 405 DEVVRF 410 (412)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998864
No 159
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.97 E-value=1.5e-30 Score=232.02 Aligned_cols=324 Identities=14% Similarity=0.085 Sum_probs=221.6
Q ss_pred cccccccCCCC------CChHHHHHHHHHcCCC--CCCccCCChHHHHHHHHHHHHh-CC----CCeEE--cCCchHHHH
Q 018243 3 TRTVDLRSDTV------TKPTEAMRAAMASAEV--DDDVLMHDPTAFRLETEMAKVM-GK----EAGLF--VPSGTMGNL 67 (359)
Q Consensus 3 ~~~id~~~~~~------~~~~~~~~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~-~~----~~~~~--~~~gt~a~~ 67 (359)
+..|||..+.+ ..|++.+.+++.+... ....|+...+..++++.+++++ +. +..++ ++||++|+.
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~~ 105 (394)
T 2ay1_A 26 QGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGLKSETTATLATVGGTGALR 105 (394)
T ss_dssp TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHH
T ss_pred ccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhHHH
Confidence 45789999874 1445888888876432 2334666677899999999997 54 23355 788889999
Q ss_pred HHHHHhhh-hcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCCCCHHHHHHHhcCCCCCccCCceeEEEEec
Q 018243 68 ISVLVHCE-TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLEN 144 (359)
Q Consensus 68 ~~l~~~~~-~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~ 144 (359)
.++..+.. .+|++|+++.|+|.+... .+...|.+++.++.+ +++.+|++++++.+++.. ++++++++ +
T Consensus 106 ~~~~~~~~~~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-----~~~~~~~~-~ 176 (394)
T 2ay1_A 106 QALELARMANPDLRVFVSDPTWPNHVS---IMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAK-----KGDMVLLH-G 176 (394)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCHHHHH---HHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCC-----TTCEEEEE-S
T ss_pred HHHHHHHhcCCCCEEEEcCCCChhHHH---HHHHcCCceEEEecccccCCccCHHHHHHHHHhCC-----CCCEEEEe-C
Confidence 88877652 389999999999887554 366678888888764 567789999999998410 23555555 6
Q ss_pred cccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhh--cCchhHhhhc-CccEE-EEeccccCCCcee--eEEe
Q 018243 145 THANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVA--LGVPVRRLVQ-AADSA-SVCLSKGLGAPVG--SVIV 218 (359)
Q Consensus 145 ~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~--~~~~~~~~~~-~~d~~-~~s~~K~~g~~~g--g~~~ 218 (359)
.++||||.+++.+++++|+++|++||+++|+|++|..+.... ...+...+.. ..+++ +.|+||++|.++- |+++
T Consensus 177 ~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~ 256 (394)
T 2ay1_A 177 CCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLL 256 (394)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEE
Confidence 667799999999999999999999999999999976543311 1112222321 33444 5599999985432 7777
Q ss_pred c---CHHHHHHHHH-HH---HhhCCCcchhHHHHHHHHHHHH---------HhHHHHhhhHHHHHHHHHHHHhcCC---C
Q 018243 219 G---SKEFIKKARR-LR---KTLGGGMRQVGVLCAAALVALQ---------ENVLVMLDGDHKKAKLLAEGLNQLK---G 279 (359)
Q Consensus 219 ~---~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~l~---------~~~~~~~~~~~~~~~~l~~~l~~~~---g 279 (359)
+ ++++++.+.. +. .....+. +...++++...++ ...++..+++.++++++.+.|+++. +
T Consensus 257 ~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 334 (394)
T 2ay1_A 257 ALCADAATRELAQGAMAFLNRQTYSFP--PFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDR 334 (394)
T ss_dssp EECSSHHHHHHHHHHHHHHHHTTTSSC--CCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSST
T ss_pred EEeCCHHHHHHHHHHHHHHHhhhcCCC--ChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 6 6765544321 21 1111111 2333344444442 3445566777888899999998862 3
Q ss_pred ceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018243 280 LRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
+++.. +..+.++|+.++. +.+.+.|.++||.+.++ +|++++ .++++++++++++|+++
T Consensus 335 ~~~~~-~~~g~~~~~~~~~------~~~~~~l~~~gi~v~~~----~Ris~~-~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 335 FGFVA-EHRGMFSRLGATP------EQVKRIKEEFGIYMVGD----SRINIA-GLNDNTIPILARAIIEV 392 (394)
T ss_dssp TTHHH-HCCSSEEECCCCH------HHHHHHHHHHCEECCTT----CEEEGG-GCCTTTHHHHHHHHHHH
T ss_pred eeEEc-CCceEEEeeCCCH------HHHHHHHHhCCEEecCC----CeEEee-cCCHhhHHHHHHHHHHc
Confidence 66533 3457788876542 35666778999999774 599987 57999999999999875
No 160
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.97 E-value=8.6e-29 Score=226.62 Aligned_cols=316 Identities=16% Similarity=0.140 Sum_probs=214.7
Q ss_pred CCCccCCChHHHHHHHHH----HHHhCCC----CeEEcCCchHHHHHHHHHhhhh-------------cCCeEEecCCCc
Q 018243 30 DDDVLMHDPTAFRLETEM----AKVMGKE----AGLFVPSGTMGNLISVLVHCET-------------RGSEVILGDNSH 88 (359)
Q Consensus 30 ~~~~~~~~~~~~~l~~~l----a~~~~~~----~~~~~~~gt~a~~~~l~~~~~~-------------~g~~vl~~~~~~ 88 (359)
+...|..++...++|+.+ ++++|.+ ..++++|||+|+..++.++..+ +++.|+++..+|
T Consensus 123 ~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H 202 (511)
T 3vp6_A 123 NMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSH 202 (511)
T ss_dssp CSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSC
T ss_pred CCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCch
Confidence 344566778877777765 5567876 3488999999999999888742 356899999999
Q ss_pred ceeeccccccccCCc---cceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHH
Q 018243 89 IHIYENGGISTIGGV---HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEI 165 (359)
Q Consensus 89 ~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~ 165 (359)
.+..+ + +...|. +++.++.+.++.+|+++|++.|++.... +..+++|+++ .++|++|.+- ++++|.++
T Consensus 203 ~s~~~-~--~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~--g~~~~~vv~~-~~~~~~G~vd---~l~~I~~i 273 (511)
T 3vp6_A 203 YSIKK-A--GAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQK--GYVPFYVNAT-AGTTVYGAFD---PIQEIADI 273 (511)
T ss_dssp THHHH-H--HHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHT--TCEEEEEEEE-BSCSSSCCBC---CHHHHHHH
T ss_pred HHHHH-H--HHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhc--CCCcEEEEEe-cCCCCCcccc---cHHHHHHH
Confidence 99776 3 666676 7888888888999999999999831000 0127788874 4556999974 49999999
Q ss_pred HHHcCcEEEEecccccchhhhcCch-hHhhhcCccEEEEeccccCCCcee-eEEec-CHHHHHHHHHHH-HhhC------
Q 018243 166 AKKHGLKLHIDGARIFNAAVALGVP-VRRLVQAADSASVCLSKGLGAPVG-SVIVG-SKEFIKKARRLR-KTLG------ 235 (359)
Q Consensus 166 ~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~-~~~~~~~~~~~~-~~~~------ 235 (359)
|++||+++|+|++|+.+........ ...-...+|++++++||++++|.| |+++. +++..+...... .+..
T Consensus 274 a~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 353 (511)
T 3vp6_A 274 CEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHY 353 (511)
T ss_dssp HHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSS
T ss_pred HHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCccccc
Confidence 9999999999999877655321111 111123679999999999988866 55544 555555432111 1110
Q ss_pred ------------CCcchhHHHHHHHHHHH-HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecC-CccceEEEEEeccch-
Q 018243 236 ------------GGMRQVGVLCAAALVAL-QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVD-AVETNIVYFEITEDS- 300 (359)
Q Consensus 236 ------------~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~~~~~~~~~~~~~~- 300 (359)
.+.+.......+++..+ ....+++.++..++++++++.|++.|++++..+ +...+++++.+....
T Consensus 354 ~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~ 433 (511)
T 3vp6_A 354 DVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSL 433 (511)
T ss_dssp CGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGG
T ss_pred ccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccc
Confidence 00001122223333333 344555888899999999999999999998652 335566666653210
Q ss_pred -------------HHHHHHHHHHHHhcCceecc-----CCCcEEEEEe-CCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 301 -------------KLYAACLLKKLEEHGVLVMP-----ESSTRVRIVV-HHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 301 -------------~~~~~~~~~~l~~~gi~~~~-----~~~~~lRi~~-~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
.....++.+.|.++|+.+.. ++..++|+++ ++..+++|++.+++.|+++-+.+.
T Consensus 434 ~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~~~ 506 (511)
T 3vp6_A 434 RGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDLH 506 (511)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC---
T ss_pred cccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhh
Confidence 01244788999888875532 2234799998 788999999999999998877654
No 161
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.97 E-value=7.4e-30 Score=230.79 Aligned_cols=335 Identities=13% Similarity=0.058 Sum_probs=230.2
Q ss_pred ccccccCC---CC-CChHHHHHHHHHcCCCC--CC--ccCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHHh
Q 018243 4 RTVDLRSD---TV-TKPTEAMRAAMASAEVD--DD--VLMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~---~~-~~~~~~~~~a~~~~~~~--~~--~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~~ 73 (359)
++|||.++ ++ ...+|++.+++.+.... .. .....+...++++.++++++. +..++++||++|+..++..+
T Consensus 76 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Alk~a 155 (457)
T 3tfu_A 76 EVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMA 155 (457)
T ss_dssp EEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHH
T ss_pred EEEECCCcHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHHHHH
Confidence 68999986 23 33458888888764432 11 122467788999999999954 45689999999999999988
Q ss_pred hhh------cC-CeEEecCCCcceeeccccccccC-------------CccceeeecCC--CCCCCHHHHHHHhcCCCCC
Q 018243 74 CET------RG-SEVILGDNSHIHIYENGGISTIG-------------GVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGE 131 (359)
Q Consensus 74 ~~~------~g-~~vl~~~~~~~~~~~~~~~~~~~-------------g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~ 131 (359)
+.. ++ ++|++.+++|..... + ..... ...+..++.+. ....|+++|++.++++.
T Consensus 156 ~~~~~~~g~~g~~~ii~~~~~yhg~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~-- 231 (457)
T 3tfu_A 156 LQYWRGRGLPGKRRLMTWRGGYHGDTF-L-AMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHA-- 231 (457)
T ss_dssp HHHHHHTTCTTCCEEEEETTCCCCSSH-H-HHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHG--
T ss_pred HHHHHhcCCCCCceEEEEcCCcCCccH-H-hhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCC--
Confidence 742 44 478877777654332 1 11111 11222332221 12237889999887421
Q ss_pred ccCCceeEEEEeccccCCCceec-ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc--hhHhhhcCccEEEEecccc
Q 018243 132 IVYPTTRLICLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV--PVRRLVQAADSASVCLSKG 208 (359)
Q Consensus 132 ~~~~~~~~v~i~~~~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~~d~~~~s~~K~ 208 (359)
+++++|++++..+|++|... +.+++++|+++|++||+++|+||+|... ...+. ....+....|++ +++|.
T Consensus 232 ---~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~--gr~G~~~a~~~~~~~pdii--t~sK~ 304 (457)
T 3tfu_A 232 ---GELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGF--GRTGALFAADHAGVSPDIM--CVGKA 304 (457)
T ss_dssp ---GGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTT--TTTSSSSTHHHHTCCCSEE--EECGG
T ss_pred ---CCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCC--ccccchhHhHhcCCCceEE--EEChh
Confidence 46888988763666888765 6788999999999999999999997532 22222 222232356665 77798
Q ss_pred CCCce--eeEEecCHHHHHHHHHHH-H--hhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC---CC
Q 018243 209 LGAPV--GSVIVGSKEFIKKARRLR-K--TLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL---KG 279 (359)
Q Consensus 209 ~g~~~--gg~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~---~g 279 (359)
++++. .|++++++++++.+.... . ..+.++..+++.++++..+++...+ ...++..++.+++++.|+++ |+
T Consensus 305 l~gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~ 384 (457)
T 3tfu_A 305 LTGGYLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTARALPA 384 (457)
T ss_dssp GGTTSSCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGGGSTT
T ss_pred hhCCCcceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 86642 377888999988864211 1 3445566677888888888764432 35667777888888888765 44
Q ss_pred ceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 280 LRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+... +..+.++++.+..+ .+..++.+.|.++||.+.+.+ .++|++++...+++++++++++|+++++++.
T Consensus 385 v~~v--r~~G~~~~i~l~~~--~~~~~~~~~l~~~Gv~v~~~~-~~lRi~p~~~~t~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 385 VTDV--RVCGAIGVIECDRP--VDLAVATPAALDRGVWLRPFR-NLVYAMPPYICTPAEITQITSAMVEVARLVG 454 (457)
T ss_dssp EEEE--EECSSCEEEEESSC--CCHHHHHHHHHHTTEECCCBT-TEEEECCCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred eeee--ecCCeEEEEEECCc--ccHHHHHHHHHHCCeEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4432 34677888888753 357789999999999998865 6899998888999999999999999998764
No 162
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.97 E-value=1.4e-29 Score=227.60 Aligned_cols=319 Identities=17% Similarity=0.154 Sum_probs=211.9
Q ss_pred hHHHHHHHHHcCCCCCC--------ccCCCh----HHHHHHHHHHHHhCCCCe-EEcCCchHHHHHHHHHhhhhcCCeEE
Q 018243 16 PTEAMRAAMASAEVDDD--------VLMHDP----TAFRLETEMAKVMGKEAG-LFVPSGTMGNLISVLVHCETRGSEVI 82 (359)
Q Consensus 16 ~~~~~~~a~~~~~~~~~--------~~~~~~----~~~~l~~~la~~~~~~~~-~~~~~gt~a~~~~l~~~~~~~g~~vl 82 (359)
++|.+.+++.+...... .|.... ....+++.+++++|.+.. +++++|++|+..++.+++ ++||+|+
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~v~~~sGs~a~~~a~~~~~-~~gd~v~ 120 (420)
T 3gbx_A 42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALL-QPGDTVL 120 (420)
T ss_dssp CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHC-CTTCEEE
T ss_pred CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCceeEecCcHHHHHHHHHHhc-CCCCEEE
Confidence 57899999987652211 121111 123445788899998766 568999999999998887 5999999
Q ss_pred ecCCCcceeeccccccccCCcc--ceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHH
Q 018243 83 LGDNSHIHIYENGGISTIGGVH--PRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTD 160 (359)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~--~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~ 160 (359)
++.++|.+....+......|.. .+.++.+.++.+|+++|++.+++ .++++|++++ ++||+ ..+ ++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~-------~~~~~v~~~~-~~~~~--~~~---l~ 187 (420)
T 3gbx_A 121 GMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKE-------HKPKMIIGGF-SAYSG--VVD---WA 187 (420)
T ss_dssp EEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHH-------HCCSEEEECC-TTCCS--CCC---HH
T ss_pred ecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHh-------cCCeEEEEec-CccCC--ccC---HH
Confidence 9999987744212122333433 34455667788999999999983 3588998855 44453 444 89
Q ss_pred HHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCH---HHHHHHHHHHHhhCCC
Q 018243 161 SVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSK---EFIKKARRLRKTLGGG 237 (359)
Q Consensus 161 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~---~~~~~~~~~~~~~~~~ 237 (359)
+|.++|++||+++|+|++|..+... .+.....+ ...|+++.|+||++++|.||++++++ ++.+.++........+
T Consensus 188 ~l~~l~~~~~~~li~De~~~~~~~~-~~~~~~~~-~~~di~~~s~sK~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (420)
T 3gbx_A 188 KMREIADSIGAYLFVDMAHVAGLIA-AGVYPNPV-PHAHVVTTTTHKTLAGPRGGLILAKGGDEELYKKLNSAVFPSAQG 265 (420)
T ss_dssp HHHHHHHHTTCEEEEECTTTHHHHH-TTSSCCST-TTSSEEEEESSGGGCSCSCEEEEESSCCHHHHHHHHHHHC----C
T ss_pred HHHHHHHHcCCEEEEECCcchhcee-cccCCccc-ccCCEEEeecccCCCCCCceEEEEcCCcHHHHHHhhhhcCCCCCC
Confidence 9999999999999999998655442 12111112 24789999999999767789888886 7777765433222111
Q ss_pred cchhHHHHHHHHHHH----HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHh
Q 018243 238 MRQVGVLCAAALVAL----QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEE 313 (359)
Q Consensus 238 ~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 313 (359)
...... .++...++ +...++.+++..++++++.+.|++. |+++..++..++++|+.+.. .+.+...+.+.|.+
T Consensus 266 ~~~~~~-~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ 342 (420)
T 3gbx_A 266 GPLMHV-IAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDLVD-KNLTGKEADAALGR 342 (420)
T ss_dssp CCCHHH-HHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGG-GTCCHHHHHHHHHH
T ss_pred CcchhH-HHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEcCC-CCCCHHHHHHHHHH
Confidence 211222 22222222 2344446778888999999999986 88875444578888888765 23467788888999
Q ss_pred cCceecc-------C---CCcEEEEEeCCC----CCHHHHHHHHHHHHHHHHHH
Q 018243 314 HGVLVMP-------E---SSTRVRIVVHHQ----ISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 314 ~gi~~~~-------~---~~~~lRi~~~~~----~~~~~i~~~~~~l~~~~~~~ 353 (359)
+||.+.+ + +...+|++++.. .+++++++++++|++++++.
T Consensus 343 ~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 343 ANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp TTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred CCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence 9999876 2 334699987533 56899999999999988654
No 163
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.97 E-value=3e-29 Score=230.81 Aligned_cols=317 Identities=16% Similarity=0.127 Sum_probs=220.0
Q ss_pred HHHHHHHHcCCC-CCCccCCChHHH----HHHHHHHHHhCCC----Ce--EEcCCchHHHHHHHHHhhhhcC--------
Q 018243 18 EAMRAAMASAEV-DDDVLMHDPTAF----RLETEMAKVMGKE----AG--LFVPSGTMGNLISVLVHCETRG-------- 78 (359)
Q Consensus 18 ~~~~~a~~~~~~-~~~~~~~~~~~~----~l~~~la~~~~~~----~~--~~~~~gt~a~~~~l~~~~~~~g-------- 78 (359)
+.+.+++.+... +...+...+... ++++.+++++|.+ .. ++++||++|+..++.+++. ++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~-~g~~~~g~~~ 192 (514)
T 3mad_A 114 AFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRD-WARATKGITA 192 (514)
T ss_dssp HHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHH-HHHHHHCCSS
T ss_pred HHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHH-HhhhhcCCCC
Confidence 455555543221 222334445544 4455568888987 34 8899999999999999874 54
Q ss_pred CeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhh
Q 018243 79 SEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEY 158 (359)
Q Consensus 79 ~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~ 158 (359)
++|+++.++|.+... .+...|++++.++.+.++.+|+++|++.++ +++++|+++++ +||||.+.+
T Consensus 193 d~Vi~~~~~~~~~~~---~~~~~G~~v~~v~~~~~~~~d~~~Le~~i~--------~~~~~v~~~~~-~nptG~~~~--- 257 (514)
T 3mad_A 193 PEAVVPVSAHAAFDK---AAQYFGIKLVRTPLDADYRADVAAMREAIT--------PNTVVVAGSAP-GYPHGVVDP--- 257 (514)
T ss_dssp CEEEEETTSCTHHHH---HHHHHTCEEEEECBCTTSCBCHHHHHHHCC--------TTEEEEEEETT-CTTTCCCCC---
T ss_pred CeEEEeCccchHHHH---HHHHcCCeeEEeeeCCCCCCCHHHHHHHhc--------cCCEEEEEeCC-CCCCccccC---
Confidence 899999999988654 367779999999988889999999999998 68899998655 569999977
Q ss_pred HHHHHHHHHHcCcEEEEecccccchhh---hcCc---hhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHH-
Q 018243 159 TDSVGEIAKKHGLKLHIDGARIFNAAV---ALGV---PVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRL- 230 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a~~~~~~~---~~~~---~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~- 230 (359)
+++|.++|++||+++|+|++|+.+... ..+. .......++|++++|+||+++++.+ |+++.+++........
T Consensus 258 l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~ 337 (514)
T 3mad_A 258 IPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFI 337 (514)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEE
T ss_pred HHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCHHHhcccccc
Confidence 899999999999999999998654432 1121 1111224678999999999766655 7666654443321100
Q ss_pred HH-hh---------CCCcchh-HHHHHHHHHHH-HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEecc
Q 018243 231 RK-TL---------GGGMRQV-GVLCAAALVAL-QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITE 298 (359)
Q Consensus 231 ~~-~~---------~~~~~~~-~~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 298 (359)
.. .. .++.... ...+.+++..+ ....++..++..++++++.+.|++++++++..++ ..++++....
T Consensus 338 ~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~--~~~~~~~~~~ 415 (514)
T 3mad_A 338 AADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDP--LWVIAVASDE 415 (514)
T ss_dssp ESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC--SSEEEEECSS
T ss_pred ccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCC--eEEEEEeCCC
Confidence 00 00 1111111 12223333333 2334457778889999999999999899875433 4467776643
Q ss_pred chHHHHHHHHHHHHhcCceeccC-CCcEEEEEeC-CCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 299 DSKLYAACLLKKLEEHGVLVMPE-SSTRVRIVVH-HQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 299 ~~~~~~~~~~~~l~~~gi~~~~~-~~~~lRi~~~-~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
.+..++.+.|.++||.+... .+..+|+++. ...+++++++++++|+++++++.+
T Consensus 416 ---~~~~~l~~~L~~~Gi~v~g~~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 416 ---LNIYQVMEEMAGRGWRLNGLHRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp ---SCHHHHHHHHHTTTCBCEEETTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHhcCCEeccCCCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 36788999999999987322 2567999986 445679999999999999988764
No 164
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.97 E-value=1.8e-28 Score=217.66 Aligned_cols=282 Identities=20% Similarity=0.138 Sum_probs=210.8
Q ss_pred CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCC
Q 018243 36 HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDG 114 (359)
Q Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 114 (359)
..+...++++.+++++|.+..++++||++|+..++..++ ++|++|+++.+.|.+.+... ......|.+++.++.+
T Consensus 64 ~~~~~~~l~~~la~~~g~~~~~~~~sGt~A~~~al~~~~-~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~--- 139 (392)
T 3qhx_A 64 GNPTRTALEAALAAVEDAAFGRAFSSGMAAADCALRAML-RPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALA--- 139 (392)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHC-CTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTT---
T ss_pred CChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-CCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCC---
Confidence 367789999999999999988999999999999999887 59999999999998765411 1236678888888765
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh
Q 018243 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
|++++++.++ +++++|+++++. ||||.+.+ +++|.++|++||+++|+|++|+.+.. . .++
T Consensus 140 --d~~~l~~~i~--------~~~~~v~~~~~~-nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~---~---~~~ 199 (392)
T 3qhx_A 140 --DLDAVRAAIR--------PTTRLIWVETPT-NPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPAL---Q---QPL 199 (392)
T ss_dssp --CHHHHHHHCC--------TTEEEEEEESSC-TTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTT---C---CGG
T ss_pred --CHHHHHHhhC--------CCCeEEEEECCC-CCCcEEec---HHHHHHHHHHcCCEEEEECCCccccc---C---ChH
Confidence 9999999998 789999996655 59999877 89999999999999999999754321 1 122
Q ss_pred hcCccEEEEeccccCCCce---eeEEecC-HHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHH
Q 018243 195 VQAADSASVCLSKGLGAPV---GSVIVGS-KEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLL 270 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~~---gg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 270 (359)
..++|+++.|+||++|++. +|+++.+ +++.+.++......+... ++..++++...++.... +.++..++++++
T Consensus 200 ~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~--~~~~~~~~~~~l~~l~~-~~~~~~~~~~~l 276 (392)
T 3qhx_A 200 SLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVP--GPFDAYLTMRGLKTLVL-RMQRHSENAAAV 276 (392)
T ss_dssp GGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCC--CHHHHHHHHHHHTTHHH-HHHHHHHHHHHH
T ss_pred HhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCC--CHHHHHHHHhhhhHHHH-HHHHHHHHHHHH
Confidence 3378999999999998753 5777776 788888887776666555 44555566666665444 677788889999
Q ss_pred HHHHhcCCCceE-ecC---------------CccceEEEEEeccchHHHHHHHHHHHHhcCceeccC-------------
Q 018243 271 AEGLNQLKGLRV-DVD---------------AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE------------- 321 (359)
Q Consensus 271 ~~~l~~~~g~~~-~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~------------- 321 (359)
.+.|++.|.+.. ..+ ...+.++++.++.. ....+.+.+.|...|+.+..+
T Consensus 277 ~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~-~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~ 355 (392)
T 3qhx_A 277 AEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAG-RTAAEQLCAKTNIFILAESLGSVESLIEHPSAMT 355 (392)
T ss_dssp HHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTC-HHHHHHHHHHCSSSEECSCCCCSSCEEECGGGTS
T ss_pred HHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCc-HHHHHHHHHhCCCceECCCCCCCCceeeCccccc
Confidence 999999877643 222 11366888998762 346778888887777655322
Q ss_pred -----------CCcEEEEEeCCCCCHHHHHHHHHH
Q 018243 322 -----------SSTRVRIVVHHQISANDVHYTLSC 345 (359)
Q Consensus 322 -----------~~~~lRi~~~~~~~~~~i~~~~~~ 345 (359)
.+..||++++...+++.++.+.++
T Consensus 356 ~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~a 390 (392)
T 3qhx_A 356 HASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQA 390 (392)
T ss_dssp CGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHHH
T ss_pred ccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHHH
Confidence 245699999754444444444443
No 165
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.97 E-value=6.3e-29 Score=221.28 Aligned_cols=295 Identities=17% Similarity=0.140 Sum_probs=216.0
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHh-hhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCC
Q 018243 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVH-CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~-~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 115 (359)
++...++++.++++++.+..++++||++|+..++.++ . ++|++|+++.++|.+... .+...|++++.++.++++.
T Consensus 31 g~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~l~~-~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~ 106 (394)
T 1o69_A 31 GEFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGV-KQDDIVLASSFTFIASVA---PICYLKAKPVFIDCDETYN 106 (394)
T ss_dssp THHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTC-CTTCEEEEESSSCGGGTH---HHHHTTCEEEEECBCTTSS
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCC-CCCCEEEECCCccHHHHH---HHHHcCCEEEEEEeCCCCC
Confidence 4668999999999999988899999999999999998 6 589999999999988764 3666888999998877888
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018243 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
+|+++|++.+++.. .++++|++++ |||... ++++|.++|+++|+++|+|++|++|... .+.....+
T Consensus 107 ~d~~~l~~~i~~~~-----~~~~~v~~~~----~~G~~~---~l~~i~~l~~~~~~~li~Dea~~~g~~~-~~~~~~~~- 172 (394)
T 1o69_A 107 IDVDLLKLAIKECE-----KKPKALILTH----LYGNAA---KMDEIVEICKENDIVLIEDAAEALGSFY-KNKALGTF- 172 (394)
T ss_dssp BCHHHHHHHHHHCS-----SCCCEEEEEC----GGGCCC---CHHHHHHHHHHTTCEEEEECTTCTTCEE-TTEETTSS-
T ss_pred cCHHHHHHHHhccc-----CCceEEEEEC----CCCChh---hHHHHHHHHHHcCCEEEEECcCccccee-CCcccccc-
Confidence 99999999998310 1688998865 678654 5899999999999999999998755432 23222222
Q ss_pred cCccEEEEeccccCCCceeeEEec-CHHHHHHHHHHHHhhCC------------CcchhHHHHHHHHHHHHHhHHHHhhh
Q 018243 196 QAADSASVCLSKGLGAPVGSVIVG-SKEFIKKARRLRKTLGG------------GMRQVGVLCAAALVALQENVLVMLDG 262 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~~gg~~~~-~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~~~~~~~~~ 262 (359)
...|+.++|.+|.++++.+|++++ ++++.+.++........ +...++..++++...++. +++..++
T Consensus 173 ~~~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~-l~~~~~~ 251 (394)
T 1o69_A 173 GEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEV-LEQRVLK 251 (394)
T ss_dssp SSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTT-HHHHHHH
T ss_pred cCcEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHHH-HHHHHHH
Confidence 246677778899998655688888 58888887765432210 111234555555444443 3447778
Q ss_pred HHHHHHHHHHHHhcCCCceEecCCc--cce--EEEEEeccch-------------------HHHHHHHHHHHHhcCceec
Q 018243 263 DHKKAKLLAEGLNQLKGLRVDVDAV--ETN--IVYFEITEDS-------------------KLYAACLLKKLEEHGVLVM 319 (359)
Q Consensus 263 ~~~~~~~l~~~l~~~~g~~~~~~~~--~~~--~~~~~~~~~~-------------------~~~~~~~~~~l~~~gi~~~ 319 (359)
..++++++.+.|+++ +++..+.. ..+ ++++.++... +.+..++.+.|.++||.+.
T Consensus 252 ~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~ 329 (394)
T 1o69_A 252 KREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETR 329 (394)
T ss_dssp HHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCB
T ss_pred HHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCCccc
Confidence 888999999999886 55432211 123 4667776311 2467889999999999986
Q ss_pred cCCC------------------------cEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 320 PESS------------------------TRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 320 ~~~~------------------------~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
++.. ..++++++..++++|+++++++|+++++.
T Consensus 330 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~~ 386 (394)
T 1o69_A 330 PLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIKA 386 (394)
T ss_dssp CCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred ccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHhc
Confidence 5510 34677778889999999999999988654
No 166
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.97 E-value=2.6e-28 Score=216.81 Aligned_cols=282 Identities=15% Similarity=0.130 Sum_probs=207.8
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018243 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.+...++++.++++++.+..+++++|++|+..++..+. ++|++|+++.++|.+.+... ..++..|.+++.++.+
T Consensus 51 ~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~~~~~~-~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---- 125 (386)
T 1cs1_A 51 NPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFL-KPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQG---- 125 (386)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHC-CTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTT----
T ss_pred CccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHh-CCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCC----
Confidence 57789999999999999888889999999999999887 58999999999998755410 1135678888888764
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018243 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
|++++++.++ +++++|++++ ++||||.+.+ +++|.++|++||+++|+|++|..+... .. +.
T Consensus 126 -d~~~l~~~i~--------~~~~~v~~~~-~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~---~~---~~ 186 (386)
T 1cs1_A 126 -DEQALRAALA--------EKPKLVLVES-PSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQ---NP---LA 186 (386)
T ss_dssp -CHHHHHHHHH--------TCCSEEEEEC-SCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC---CG---GG
T ss_pred -CHHHHHHhhc--------cCCcEEEEeC-CCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC---Cc---cc
Confidence 8999999998 6789999966 4559999987 899999999999999999998655432 11 12
Q ss_pred cCccEEEEeccccCCCcee---eEEecCH-HHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHH
Q 018243 196 QAADSASVCLSKGLGAPVG---SVIVGSK-EFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLA 271 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~~g---g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 271 (359)
.+.|+++.|+||++++|.+ |+++.++ ++.+.++.....++.+. ++..++++..+++.. ..+.++..++.+.+.
T Consensus 187 ~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~l~~~-~~~~~~~~~~~~~l~ 263 (386)
T 1cs1_A 187 LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTG--GAFDSYLLLRGLRTL-VPRMELAQRNAQAIV 263 (386)
T ss_dssp GTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBC--CHHHHHHHHHHHTTH-HHHHHHHHHHHHHHH
T ss_pred cCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCC--CHHHHHHHHhcccHH-HHHHHHHHHHHHHHH
Confidence 3688999999999987653 8888765 88888876665555433 334444444455433 335667778888888
Q ss_pred HHHhcCCCceEe-cC---------------CccceEEEEEeccchHHHHHHHHHHHHhcCceecc---C-----------
Q 018243 272 EGLNQLKGLRVD-VD---------------AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMP---E----------- 321 (359)
Q Consensus 272 ~~l~~~~g~~~~-~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~---~----------- 321 (359)
+.|++++.+.-. .+ ...++++.+.++. ..+.+.+.|.++||.+.. +
T Consensus 264 ~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~ 339 (386)
T 1cs1_A 264 KYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG----DEQTLRRFLGGLSLFTLAESLGGVESLISHAAT 339 (386)
T ss_dssp HHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS----CHHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGG
T ss_pred HHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC----CHHHHHHHHHhCCcceEcccCCCcceeeecccc
Confidence 888887555321 11 1237778888765 255777888889998753 2
Q ss_pred ----------------CCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018243 322 ----------------SSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 322 ----------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
..+++|++++...++++++.+.++|+++
T Consensus 340 ~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 340 MTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp TTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred cccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 1478999998766666666666666544
No 167
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.97 E-value=5.5e-29 Score=221.53 Aligned_cols=305 Identities=18% Similarity=0.196 Sum_probs=220.3
Q ss_pred HHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHh------hhhcCCeEEecCCCccee
Q 018243 18 EAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVH------CETRGSEVILGDNSHIHI 91 (359)
Q Consensus 18 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~------~~~~g~~vl~~~~~~~~~ 91 (359)
+++.+++.+.... ..|...+...++++.+++++|.+..++++||++|+..++.++ ..++|++|+++.++|.+.
T Consensus 15 ~~~~~a~~~~~~~-~~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~ 93 (390)
T 3b8x_A 15 DLEYKAIQSVLDS-KMFTMGEYVKQYETQFAKTFGSKYAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTT 93 (390)
T ss_dssp HHHHHHHHHHHHH-TCCSSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHH
T ss_pred HHHHHHHHHHHHc-CCCCCChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHH
Confidence 5666666654322 235567889999999999999998899999999999999988 135899999999999887
Q ss_pred eccccccccCCccceeeecCCC-CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcC
Q 018243 92 YENGGISTIGGVHPRTVKNNQD-GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHG 170 (359)
Q Consensus 92 ~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~ 170 (359)
.. . +...|.+++.++.+.+ +.+|+++|++.++ +++++|++++. +|.+. ++++|.++|+++|
T Consensus 94 ~~-~--~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~--------~~~~~v~~~~~----~g~~~---~~~~i~~l~~~~~ 155 (390)
T 3b8x_A 94 YY-P--LQQYGLRVKFVDIDINTLNIDIESLKEAVT--------DSTKAILTVNL----LGNPN---NFDEINKIIGGRD 155 (390)
T ss_dssp HH-H--HHHTTCEEEEECBCTTTCSBCHHHHHHHCC--------TTEEEEEEECG----GGCCC---CHHHHHHHHTTSC
T ss_pred HH-H--HHHcCCEEEEEecCccccCcCHHHHHHHhC--------cCCeEEEEECC----ccChh---hHHHHHHHHHHcC
Confidence 65 2 6678889999987755 8899999999998 68899998653 34543 5899999999999
Q ss_pred cEEEEecccccchhhhcCchhHhhhcCccEEEEe--ccccCCCceeeEEecCH-HHHHHHHHHHHhh-------------
Q 018243 171 LKLHIDGARIFNAAVALGVPVRRLVQAADSASVC--LSKGLGAPVGSVIVGSK-EFIKKARRLRKTL------------- 234 (359)
Q Consensus 171 ~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s--~~K~~g~~~gg~~~~~~-~~~~~~~~~~~~~------------- 234 (359)
+++|+|++|+.|... .+. .+....|+.++| .+|.++++.||+++.++ ++.+.++......
T Consensus 156 ~~li~D~a~~~g~~~-~~~---~~g~~~~~~~~s~~~~k~~~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~ 231 (390)
T 3b8x_A 156 IILLEDNCESMGATF-NNK---CAGTFGLMGTFSSFYSNHIATMEGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTG 231 (390)
T ss_dssp CEEEEECTTCTTCEE-TTE---ETTSSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTE
T ss_pred CEEEEECcCcccCEE-CCc---ccccccceEEEEccCCCCCccCCceEEEeCCHHHHHHHHHHHhcCCCccccccccccc
Confidence 999999999766543 221 222234555544 35666555668887764 6776665543211
Q ss_pred ----------------CCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceE--EEEEe
Q 018243 235 ----------------GGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNI--VYFEI 296 (359)
Q Consensus 235 ----------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~--~~~~~ 296 (359)
|.+...++..+++++..++.. ++..++..++++++.+.|+++|++++..++...++ +++.+
T Consensus 232 ~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~ 310 (390)
T 3b8x_A 232 VKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQLKKL-PRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFII 310 (390)
T ss_dssp ECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEE
T ss_pred cccccccccccceeccccccCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEe
Confidence 122224566666666666544 34777888999999999999888887432223333 44555
Q ss_pred ccchHHHHHHHHHHHHhcCceecc---CC---C-----------------------cEEEEEeCCCCCHHHHHHHHHHH
Q 018243 297 TEDSKLYAACLLKKLEEHGVLVMP---ES---S-----------------------TRVRIVVHHQISANDVHYTLSCF 346 (359)
Q Consensus 297 ~~~~~~~~~~~~~~l~~~gi~~~~---~~---~-----------------------~~lRi~~~~~~~~~~i~~~~~~l 346 (359)
+...+.+.+++.+.|.++||.+.+ +. . ..+|+++++.++++|++++++.|
T Consensus 311 ~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 311 KKDSGVIRKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp CTTSCCCHHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred cCcCcccHHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 521123678899999999998854 11 1 25999999999999999999876
No 168
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.97 E-value=9.1e-29 Score=224.09 Aligned_cols=325 Identities=14% Similarity=0.075 Sum_probs=225.2
Q ss_pred ChHHHHHHHHHcCCCC-CCccCCChHHHHH----HHHHHHHhCCCC-------eEEcCCchHHHHHHHHHhhh-------
Q 018243 15 KPTEAMRAAMASAEVD-DDVLMHDPTAFRL----ETEMAKVMGKEA-------GLFVPSGTMGNLISVLVHCE------- 75 (359)
Q Consensus 15 ~~~~~~~~a~~~~~~~-~~~~~~~~~~~~l----~~~la~~~~~~~-------~~~~~~gt~a~~~~l~~~~~------- 75 (359)
.++|.+.+++.++... ...|..++...++ ++.+++++|.+. +++++|||+|+..++.+++.
T Consensus 53 ~~~~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~ 132 (452)
T 2dgk_A 53 WDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRME 132 (452)
T ss_dssp CCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4557888888876532 2234556665544 455688888863 58899999999999988763
Q ss_pred hcC-----CeEEecCCCcceeeccccccccCCccceeeecCC-CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCC
Q 018243 76 TRG-----SEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ-DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANC 149 (359)
Q Consensus 76 ~~g-----~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p 149 (359)
.+| ++|++++ +|.+..+ .+...|++++.++.++ ++.+|+++|++.++ +++++|++ +.++||
T Consensus 133 ~~G~~~~~~~vi~~~-~h~~~~~---~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~--------~~t~~v~~-~~~~n~ 199 (452)
T 2dgk_A 133 AAGKPTDKPNLVCGP-VQICWHK---FARYWDVELREIPMRPGQLFMDPKRMIEACD--------ENTIGVVP-TFGVTY 199 (452)
T ss_dssp HTTCCCSCCEEEESS-CCHHHHH---HHHHTTCEEEECCCBTTBCSCCHHHHHHHCC--------TTEEEEEC-BBSCTT
T ss_pred hcCCCCCCcEEEECC-CcHHHHH---HHHHcCceEEEEecCCCCCeECHHHHHHHHh--------hCCEEEEE-EcCCcC
Confidence 144 5899999 8877654 3677899999998766 78999999999998 67888888 455569
Q ss_pred CceecChhhHHHHHHHHHHc------CcEEEEecccccchhhhcCchh-Hhh-hcCccEEEEeccccCCCcee-eEEecC
Q 018243 150 GGRCLSVEYTDSVGEIAKKH------GLKLHIDGARIFNAAVALGVPV-RRL-VQAADSASVCLSKGLGAPVG-SVIVGS 220 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~------~~~li~D~a~~~~~~~~~~~~~-~~~-~~~~d~~~~s~~K~~g~~~g-g~~~~~ 220 (359)
||.+.+ +++|.++|+++ |+++|+|++|+.+...+..... ..+ ..++|++++++||++++|.+ |+++.+
T Consensus 200 tG~~~~---l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~~~~~ 276 (452)
T 2dgk_A 200 TGNYEF---PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWR 276 (452)
T ss_dssp TCBBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEES
T ss_pred CcccCC---HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEEEEEc
Confidence 999866 89999999996 9999999997655432111110 111 23788999999998866666 777774
Q ss_pred -HHHH-HHHHHHHHhhCC---------Ccch-hHHHHHHHHHHH-HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCC-
Q 018243 221 -KEFI-KKARRLRKTLGG---------GMRQ-VGVLCAAALVAL-QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDA- 286 (359)
Q Consensus 221 -~~~~-~~~~~~~~~~~~---------~~~~-~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~- 286 (359)
++.. +.+.....+.+. +.+. ......+++..+ .+..++..++..++++++.+.|++++++++..+.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 356 (452)
T 2dgk_A 277 DEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGR 356 (452)
T ss_dssp SGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCC
Confidence 4332 332111111111 1111 122222333333 2334457778889999999999999889886432
Q ss_pred --ccceEEEEEeccch--HHHHHHHHHHHHhcCceec----cC---CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 287 --VETNIVYFEITEDS--KLYAACLLKKLEEHGVLVM----PE---SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 287 --~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~~~----~~---~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
...+++.+.++... ..+..++.+.|.++||.+. +. +..++|+++...+++++++++++.|+++++++.+
T Consensus 357 ~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~~~~ 436 (452)
T 2dgk_A 357 PDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSD 436 (452)
T ss_dssp TTTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEEecCcccccCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 36678888876410 1245789999999999642 22 3458999998888999999999999999887754
No 169
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.97 E-value=1.8e-29 Score=232.32 Aligned_cols=336 Identities=12% Similarity=0.094 Sum_probs=221.3
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHh-------CC----CCeE-EcCCchHHHHHHHHH
Q 018243 5 TVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVM-------GK----EAGL-FVPSGTMGNLISVLV 72 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~-------~~----~~~~-~~~~gt~a~~~~l~~ 72 (359)
.|||..+.+..|.+.+.+++.+.... ..|+..++...+++.+++.+ +. +..+ +++|+++++..++..
T Consensus 106 ~i~l~~g~~~~~~~~~~~al~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~ 184 (546)
T 2zy4_A 106 SLSYVRDQLGLDPAAFLHEMVDGILG-CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFES 184 (546)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHHT-CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHH
T ss_pred hhecccCCCCCCChHHHHHHHHhhhc-CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHH
Confidence 67888888888777787777765422 45666666667777766544 12 1234 455555666666666
Q ss_pred h----hhhcCCeEEecCCCcceeeccccccccCCccceeeecCC--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccc
Q 018243 73 H----CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 146 (359)
Q Consensus 73 ~----~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~ 146 (359)
+ +.++||.|++++|+|..... .......|++++.++.+. ++.+|+++|++.++ +++++|++++ +
T Consensus 185 l~~~~l~~~Gd~Vlv~~P~y~~~~~-~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~--------~~~k~v~l~~-p 254 (546)
T 2zy4_A 185 LKLNGLLKAGDKVAIGMPVFTPYIE-IPELAQYALEEVAINADPSLNWQYPDSELDKLKD--------PAIKIFFCVN-P 254 (546)
T ss_dssp HHHTTSSCTTCEEEEEESCCHHHHH-HHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS--------TTEEEEEEES-S
T ss_pred hhhhhcCCCCCEEEEeCCCCccHHH-HHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhC--------CCCeEEEEEC-C
Confidence 3 23589999999999877554 211223467788886543 35689999988776 7899999975 5
Q ss_pred cCCCceecChhhHHHHHHHH--HHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee--eEEecCHH
Q 018243 147 ANCGGRCLSVEYTDSVGEIA--KKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG--SVIVGSKE 222 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~--~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g--g~~~~~~~ 222 (359)
+||||.+++.+++++|+++| +++|++||+||+|..... ...+......+..+++.|+||.+|.++. ||++++++
T Consensus 255 ~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~--~~~s~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~ 332 (546)
T 2zy4_A 255 SNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFAD--DFQSLFAICPENTLLVYSFSKYFGATGWRLGVVAAHQQ 332 (546)
T ss_dssp CSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGST--TCCCHHHHCGGGEEEEEESTTTTTCGGGCEEEEEEESS
T ss_pred CCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcc--cCcCHHHhCCCCEEEEEeCccccCCCCcceEEEEECCH
Confidence 77999999999999999999 789999999999754332 2333333322334556699999986542 88887664
Q ss_pred -HHHHHHH-------------HHH-----------------------hhCCCcchhHHHHHH--HHHH-H---HHhHHHH
Q 018243 223 -FIKKARR-------------LRK-----------------------TLGGGMRQVGVLCAA--ALVA-L---QENVLVM 259 (359)
Q Consensus 223 -~~~~~~~-------------~~~-----------------------~~~~~~~~~~~~~~~--~~~~-l---~~~~~~~ 259 (359)
+++.+.. +.. ..+.+.+...+.+.+ +..+ + +.+.+..
T Consensus 333 ~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~~~~~~~~~ 412 (546)
T 2zy4_A 333 NVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTL 412 (546)
T ss_dssp CHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 7666521 110 111122222222211 1122 2 2344546
Q ss_pred hhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEecc------ch--------HH-HHHHHHHHHHhcCceeccCC--
Q 018243 260 LDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITE------DS--------KL-YAACLLKKLEEHGVLVMPES-- 322 (359)
Q Consensus 260 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~------~~--------~~-~~~~~~~~l~~~gi~~~~~~-- 322 (359)
++.+.++++.+.+.|. . ++.. .++..+.++|+.++. .. +. +.+.+.+.|.++||.+.|+.
T Consensus 413 r~~~~~r~~~l~~~L~-~-~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F 489 (546)
T 2zy4_A 413 KQLIRRRETTLYRELG-M-PPLR-DENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGF 489 (546)
T ss_dssp HHHHHHHHHHHHGGGT-S-SCCC-CTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCT
T ss_pred HHHHHHHHHHHHHhcC-C-Cccc-CCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEEeCcccc
Confidence 6667778888888885 4 4443 234567778998752 00 01 23446666789999998864
Q ss_pred ---CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhhc
Q 018243 323 ---STRVRIVVHHQISANDVHYTLSCFQKIYAGVCEEN 357 (359)
Q Consensus 323 ---~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 357 (359)
.+++||++. ..+++++++++++|+++++++.++.
T Consensus 490 ~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~~~~~~ 526 (546)
T 2zy4_A 490 GSNRPSGRASLA-NLNEYEYAAIGRALRKMADELYAEY 526 (546)
T ss_dssp TCSSCEEEEESS-SSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCeEEEEec-cCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 457999996 5689999999999999998877543
No 170
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.97 E-value=1.8e-28 Score=224.16 Aligned_cols=320 Identities=15% Similarity=0.139 Sum_probs=217.6
Q ss_pred HHHHHHHHcCC-CCCCccCCChHHHHHHHHH----HHHhCCCC-----------eEEcCCchHHHHHHHHHhhhh--c--
Q 018243 18 EAMRAAMASAE-VDDDVLMHDPTAFRLETEM----AKVMGKEA-----------GLFVPSGTMGNLISVLVHCET--R-- 77 (359)
Q Consensus 18 ~~~~~a~~~~~-~~~~~~~~~~~~~~l~~~l----a~~~~~~~-----------~~~~~~gt~a~~~~l~~~~~~--~-- 77 (359)
..+.+.+.... .+...|..++...++|+.+ ++++|.+. +++++|||+|+..++.++... +
T Consensus 88 ~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~ 167 (486)
T 1js3_A 88 AMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRL 167 (486)
T ss_dssp HHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhh
Confidence 44555555542 2334466667776666554 66678763 489999999999999887531 1
Q ss_pred ----CC--------e--EEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCce------
Q 018243 78 ----GS--------E--VILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTT------ 137 (359)
Q Consensus 78 ----g~--------~--vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~------ 137 (359)
|+ + |+++.++|++..+ + +...|++++.++.+.++.+|+++|++.++ +++
T Consensus 168 ~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~-~--~~~~G~~v~~v~~d~~~~~d~~~L~~~i~--------~~~~~g~~p 236 (486)
T 1js3_A 168 QAASPGLTQGAVLEKLVAYASDQAHSSVER-A--GLIGGVKLKAIPSDGKFAMRASALQEALE--------RDKAAGLIP 236 (486)
T ss_dssp HHHSTTCCHHHHHHHEEEEEETTCCHHHHH-H--HHHHTCEEEEECCCTTSCCCHHHHHHHHH--------HHHHTTCEE
T ss_pred hccCccchhcccCCCEEEEECCCCcHHHHH-H--HHhCCCceEEeecCCCCCCCHHHHHHHHH--------HHHhCCCCc
Confidence 32 3 7789999998665 3 67779999999888889999999999998 333
Q ss_pred eEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcC-ch-hHhhhcCccEEEEeccccCCCcee-
Q 018243 138 RLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALG-VP-VRRLVQAADSASVCLSKGLGAPVG- 214 (359)
Q Consensus 138 ~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~-~~-~~~~~~~~d~~~~s~~K~~g~~~g- 214 (359)
.+|++ +.++||||.+- ++++|.++|++||+++|+|++|+.+...... .. ...+ .++|++++++||++++|.+
T Consensus 237 ~~vv~-~~~~n~tG~~~---~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~-~~adsi~~~~hK~~~~p~~~ 311 (486)
T 1js3_A 237 FFVVA-TLGTTSCCSFD---NLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGV-EFADSFNFNPHKWLLVNFDC 311 (486)
T ss_dssp EEEEE-EBSCTTTCCBC---CHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTG-GGCSEEEECHHHHSSCCSSC
T ss_pred eEEEE-eCCCCCCCCCC---CHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCc-cccCeeEEchhhhcCCCcce
Confidence 36666 45567999864 5999999999999999999998665443211 11 1112 3689999999999988766
Q ss_pred eEEec-CHHH-HHHHHHHHHhhC------------------CCcchhHHHHHHHHHHH-HHhHHHHhhhHHHHHHHHHHH
Q 018243 215 SVIVG-SKEF-IKKARRLRKTLG------------------GGMRQVGVLCAAALVAL-QENVLVMLDGDHKKAKLLAEG 273 (359)
Q Consensus 215 g~~~~-~~~~-~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~ 273 (359)
|+++. ++.. .+.+.....+.. .+.+.......+++..+ ....++..++..++++++.+.
T Consensus 312 G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~ 391 (486)
T 1js3_A 312 SAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAF 391 (486)
T ss_dssp EEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 76666 4443 333211111100 01111222233333333 234455777888999999999
Q ss_pred HhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceecc----CCCcEEEEEe-CCCCCHHHHHHHHHHHHH
Q 018243 274 LNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMP----ESSTRVRIVV-HHQISANDVHYTLSCFQK 348 (359)
Q Consensus 274 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~----~~~~~lRi~~-~~~~~~~~i~~~~~~l~~ 348 (359)
|++.|++++..+ ...+++.+.+..... ...++.+.|.++|+.+.. .+..++|+++ ++..+++++++++++|++
T Consensus 392 L~~~~~~~~~~~-~~~~~v~f~~~~~~~-~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~ 469 (486)
T 1js3_A 392 VLQDPRFEVCAE-VTLGLVCFRLKGSDG-LNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRG 469 (486)
T ss_dssp HHHCTTEEECSC-CCSSEEEEEESSCHH-HHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HhcCCCeEEeCC-CceeEEEEEecChHH-HHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 999999998543 356777777764211 347899999878865422 2456899996 556789999999999999
Q ss_pred HHHHHHh
Q 018243 349 IYAGVCE 355 (359)
Q Consensus 349 ~~~~~~~ 355 (359)
+++++.+
T Consensus 470 ~~~~~~~ 476 (486)
T 1js3_A 470 LAAELLA 476 (486)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9887754
No 171
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.97 E-value=4.6e-28 Score=215.05 Aligned_cols=303 Identities=18% Similarity=0.173 Sum_probs=215.7
Q ss_pred CCCCChHHHHHHHHHcCCCCCCccCC--ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCc
Q 018243 11 DTVTKPTEAMRAAMASAEVDDDVLMH--DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSH 88 (359)
Q Consensus 11 ~~~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~ 88 (359)
.++..++++...+..........|+. .+...++++.+++++|.+.+++++||++|+..++..++ ++|++|+++.++|
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~i~~~sG~~ai~~~~~~~~-~~gd~vl~~~~~y 108 (389)
T 3acz_A 30 STFCFDSTQQGADLFMGKGEGHIYSRLGNPTVEQFEEMVCSIEGAAGSAAFGSGMGAISSSTLAFL-QKGDHLIAGDTLY 108 (389)
T ss_dssp SBBCCSSHHHHHHHHTTCSSCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHTTTC-CTTCEEEEESSCC
T ss_pred CceecCChHHHHHhhcCCCCCcccCCCCChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHh-CCCCEEEEeCCCc
Confidence 34555554333333322223334443 67889999999999999988999999999999988887 5999999999999
Q ss_pred ceeeccccc---cccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHH
Q 018243 89 IHIYENGGI---STIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEI 165 (359)
Q Consensus 89 ~~~~~~~~~---~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~ 165 (359)
.+.+. .. ++..|.+++.++.. |++++++.++ +++++|+++++. ||||.+.+ +++|.++
T Consensus 109 ~~~~~--~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~--------~~~~~v~~~~~~-nptG~~~~---l~~i~~~ 169 (389)
T 3acz_A 109 GCTVS--LFTHWLPRFGIEVDLIDTS-----DVEKVKAAWK--------PNTKMVYLESPA-NPTCKVSD---IKGIAVV 169 (389)
T ss_dssp HHHHH--HHHHHHHHTTCEEEEECTT-----CHHHHHHTCC--------TTEEEEEEESSC-TTTCCCCC---HHHHHHH
T ss_pred hHHHH--HHHHHHHHcCCEEEEECCC-----CHHHHHHhcC--------CCCeEEEEECCC-CCCCeecC---HHHHHHH
Confidence 87664 22 46678888888764 8999999998 689999996655 59999987 8999999
Q ss_pred HHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCce---eeEEecCH-HHHHHHHHHHHhhCCCcchh
Q 018243 166 AKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV---GSVIVGSK-EFIKKARRLRKTLGGGMRQV 241 (359)
Q Consensus 166 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~---gg~~~~~~-~~~~~~~~~~~~~~~~~~~~ 241 (359)
|+++|+++|+|++|..+.. +.+ +..++|+++.|+||+++++. +|+++.++ ++++.++.....++.+. +
T Consensus 170 ~~~~~~~livD~~~~~~~~---~~~---~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~--~ 241 (389)
T 3acz_A 170 CHERGARLVVDATFTSPCF---LKP---LELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLM--A 241 (389)
T ss_dssp HHHHTCEEEEECTTTCTTT---CCG---GGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCC--C
T ss_pred HHHcCCEEEEECCCccccc---cCc---cccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCC--C
Confidence 9999999999999755432 112 22378999999999998764 58888887 88888877666566554 4
Q ss_pred HHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceE-ecC---------------CccceEEEEEeccchHHHHH
Q 018243 242 GVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRV-DVD---------------AVETNIVYFEITEDSKLYAA 305 (359)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~-~~~---------------~~~~~~~~~~~~~~~~~~~~ 305 (359)
+..++++..+++.... +.++..+++..+.+.|++.+.+.- ..+ +..++++.+.++. .+
T Consensus 242 ~~~~~~~~~~l~~l~~-r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~-----~~ 315 (389)
T 3acz_A 242 PMDAFLCARGMKTLPI-RMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS-----FE 315 (389)
T ss_dssp HHHHHHHHHHHTTHHH-HHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-----HH
T ss_pred HHHHHHHHcCccHHHH-HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC-----HH
Confidence 4555555666654333 566777788888888887644321 111 1236677788753 33
Q ss_pred HHHHHHHhcCceecc---C---------------------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018243 306 CLLKKLEEHGVLVMP---E---------------------------SSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 306 ~~~~~l~~~gi~~~~---~---------------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
++.+.|.+.|+.+.. + ..+.+|++++.. +.+++++.|.++++
T Consensus 316 ~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~----~~~~li~~l~~al~ 387 (389)
T 3acz_A 316 AAKKLMEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIE----NVDDIIADLKQALE 387 (389)
T ss_dssp HHHHHHTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSS----CHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCcEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccC----CHHHHHHHHHHHHh
Confidence 555666777876633 1 146899999643 66666666666654
No 172
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.97 E-value=2.1e-28 Score=224.21 Aligned_cols=338 Identities=17% Similarity=0.186 Sum_probs=219.0
Q ss_pred cccccccCCCCCChHHHHHHHHHcCC--CCCCccCCChHHHHHHHH----HHHHhCCC---CeEEcCCchHHHHHHHHHh
Q 018243 3 TRTVDLRSDTVTKPTEAMRAAMASAE--VDDDVLMHDPTAFRLETE----MAKVMGKE---AGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 3 ~~~id~~~~~~~~~~~~~~~a~~~~~--~~~~~~~~~~~~~~l~~~----la~~~~~~---~~~~~~~gt~a~~~~l~~~ 73 (359)
+.++|+.... ...+.+.+++.... .+...|+.++...++|+. +++++|.+ ..++++|||+|+..++..+
T Consensus 101 ~~yl~~~~~~--~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~a 178 (497)
T 2qma_A 101 PDCIAHLHTP--PLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLA 178 (497)
T ss_dssp TTBCSSSCCC--CBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHH
T ss_pred CCeeEeCCCC--CcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHH
Confidence 3444444443 22355555543321 133446666666666655 88889884 3588999999999999885
Q ss_pred h---h---------hc------CC-eEEecCCCcceeeccccccccCCc---cceeeecCCCCCCCHHHHHHHhcCCCCC
Q 018243 74 C---E---------TR------GS-EVILGDNSHIHIYENGGISTIGGV---HPRTVKNNQDGTMDIDLIEAAIRDPKGE 131 (359)
Q Consensus 74 ~---~---------~~------g~-~vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~l~~~l~~~~~~ 131 (359)
. . .+ ++ .|+++.++|++..+ + +...|. +++.++.++++.+|+++|++.+++....
T Consensus 179 r~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~-~--~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~ 255 (497)
T 2qma_A 179 RDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQK-S--ASWMGLGEKAVMTVDANADGTMDITKLDEVIAQAKAE 255 (497)
T ss_dssp HHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHH-H--HHHTTSCGGGEEEECBCTTSSBCGGGHHHHHHHHHHT
T ss_pred HHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHH-H--HHHcCCCcccEEEEecCCCCcCCHHHHHHHHHHHHHC
Confidence 2 1 12 35 79999999998776 2 455544 7888888888999999999999731000
Q ss_pred ccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch-hHhhhcCccEEEEeccccCC
Q 018243 132 IVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP-VRRLVQAADSASVCLSKGLG 210 (359)
Q Consensus 132 ~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~~d~~~~s~~K~~g 210 (359)
..++.+|++ +..+|+||.+.+ +++|.++|++||+++|+|++|+.+........ ...+ ..+|++++|+||+++
T Consensus 256 --~~~~~~vv~-~~~~~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi-~~~D~i~~s~hK~l~ 328 (497)
T 2qma_A 256 --GLIPFAIVG-TAGTTDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGV-ERAHSISVDFHKLFY 328 (497)
T ss_dssp --TCEEEEEEE-EBSCTTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTG-GGCSEEEEETTTTTC
T ss_pred --CCcceEEEE-cCCCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCc-ccCCEEEEcchhccC
Confidence 011336666 455669999655 89999999999999999999866554322111 1112 377999999999998
Q ss_pred Ccee-eEEec-CHHHHHHHHHHHHhhCC------Cc---------chhHHHHHHHHHHH-HHhHHHHhhhHHHHHHHHHH
Q 018243 211 APVG-SVIVG-SKEFIKKARRLRKTLGG------GM---------RQVGVLCAAALVAL-QENVLVMLDGDHKKAKLLAE 272 (359)
Q Consensus 211 ~~~g-g~~~~-~~~~~~~~~~~~~~~~~------~~---------~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~ 272 (359)
+|.+ |+++. ++...+.+.....+... .. +...+...+++..+ ....++..++..++++++.+
T Consensus 329 ~p~~~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~ 408 (497)
T 2qma_A 329 QTISCGALLVNDKSNFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVAD 408 (497)
T ss_dssp CCSSCEEEEESCGGGGGGGCC--------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcceEEEEEeCHHHHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 8866 66555 45433332111111000 00 00011112222222 23344577788899999999
Q ss_pred HHhcCCCceEecCCccceEEEEEeccch---HHHHHHHHHHHHhcCceecc----CCCcEEEEEe-CCCCCHHHHHHHHH
Q 018243 273 GLNQLKGLRVDVDAVETNIVYFEITEDS---KLYAACLLKKLEEHGVLVMP----ESSTRVRIVV-HHQISANDVHYTLS 344 (359)
Q Consensus 273 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~~~~----~~~~~lRi~~-~~~~~~~~i~~~~~ 344 (359)
.|+++|++++..+ ...+++++.+.... .....++.+.|.++|+.+.+ .+..++|+++ ++.+++++++++++
T Consensus 409 ~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~ 487 (497)
T 2qma_A 409 MIRTNDQFELLAE-PSLSTVLFRATHETADLDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLS 487 (497)
T ss_dssp HHHTCTTEEECSC-CSSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHH
T ss_pred HHhhCCCeEEEcC-CCceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHH
Confidence 9999889988544 35678888876421 01234677888888998754 3456899997 88899999999999
Q ss_pred HHHHHHHHH
Q 018243 345 CFQKIYAGV 353 (359)
Q Consensus 345 ~l~~~~~~~ 353 (359)
.|+++++++
T Consensus 488 ~l~~~~~~~ 496 (497)
T 2qma_A 488 KINMLAVEL 496 (497)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhh
Confidence 999988764
No 173
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.97 E-value=3.5e-29 Score=224.79 Aligned_cols=321 Identities=15% Similarity=0.107 Sum_probs=219.3
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCCC---C----cc--CCChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHH
Q 018243 4 RTVDLRSDTVTKPTEAMRAAMASAEVDD---D----VL--MHDPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~~---~----~~--~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~ 72 (359)
..++|+.+....+++.+.+++.+..... . .+ +..+...++++.+++++|.+ ..++++||++++..++..
T Consensus 28 ~~~yld~~~~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al~~ 107 (416)
T 1qz9_A 28 GVIYLDGNSLGARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLSA 107 (416)
T ss_dssp TCEECCTTTSCCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHHHH
T ss_pred CeEeecCCCcCCCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHHHh
Confidence 3456666555555566777766543221 1 11 12356689999999999986 346677777788777777
Q ss_pred hh-h----hcCCe-EEecCCCcceeeccc-cccccC--CccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEe
Q 018243 73 HC-E----TRGSE-VILGDNSHIHIYENG-GISTIG--GVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLE 143 (359)
Q Consensus 73 ~~-~----~~g~~-vl~~~~~~~~~~~~~-~~~~~~--g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~ 143 (359)
++ . ++|++ |+++.++|.+..... ...... |++++.++. +++|++.++ +++++|+++
T Consensus 108 ~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~~~l~~~i~--------~~~~~v~~~ 172 (416)
T 1qz9_A 108 ALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS-------PEELPQAID--------QDTAVVMLT 172 (416)
T ss_dssp HHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS-------GGGHHHHCS--------TTEEEEEEE
T ss_pred hcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc-------HHHHHHHhC--------CCceEEEEe
Confidence 65 1 47876 556667877654310 012223 778887764 778888887 678899885
Q ss_pred ccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccC-CCcee-eEEecCH
Q 018243 144 NTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGL-GAPVG-SVIVGSK 221 (359)
Q Consensus 144 ~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~-g~~~g-g~~~~~~ 221 (359)
+ ++||||.+.+ +++|.++|++||+++|+|++|+++... .....+ +.|++++|+||++ +++.+ |+++.++
T Consensus 173 ~-~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~---~~~~~~--~~d~~~~s~~K~l~~g~~~~g~l~~~~ 243 (416)
T 1qz9_A 173 H-VNYKTGYMHD---MQALTALSHECGALAIWDLAHSAGAVP---VDLHQA--GADYAIGCTYKYLNGGPGSQAFVWVSP 243 (416)
T ss_dssp S-BCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTSC---CCHHHH--TCSEEEECSSSTTCCCTTCCCEEEECT
T ss_pred c-cccCcccccC---HHHHHHHHHHcCCEEEEEccccccCcC---CChhhc--CCCEEEecCcccCCCCCCCeEEEEECH
Confidence 5 5559999988 799999999999999999998764332 222233 5899999999997 44566 8888888
Q ss_pred HHHHHHHHHHH----------------------hhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHh
Q 018243 222 EFIKKARRLRK----------------------TLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLN 275 (359)
Q Consensus 222 ~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~ 275 (359)
++.+.++.... ....++ .+....+++..+++ ...++..++..++++++.+.|+
T Consensus 244 ~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 322 (416)
T 1qz9_A 244 QLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGT-QPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVE 322 (416)
T ss_dssp TTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSC-CCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCCccccCccccccCCCCccCCCcchHHhcCCC-CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 87665432110 011111 12223333333443 2344577788889999999998
Q ss_pred cC-C--CceEecCC---ccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeC-CCCCHHHHHHHHHHHHH
Q 018243 276 QL-K--GLRVDVDA---VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVH-HQISANDVHYTLSCFQK 348 (359)
Q Consensus 276 ~~-~--g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~-~~~~~~~i~~~~~~l~~ 348 (359)
++ | ++++..+. ..++++++.++. ..++.+.|.++||.+...+..++|++++ ..++++++++++++|++
T Consensus 323 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~l~~~gi~~~~~~~~~lRis~~~~~~t~~~i~~~~~~l~~ 397 (416)
T 1qz9_A 323 QRCAAHELTLVTPREHAKRGSHVSFEHPE-----GYAVIQALIDRGVIGDYREPRIMRFGFTPLYTTFTEVWDAVQILGE 397 (416)
T ss_dssp HHHTTSCCEECSCSSGGGBCSEEEEECTT-----HHHHHHHHHTTTEECEEETTTEEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred hhccCCCeEEeCCCCHHHcCCEEEEecCC-----HHHHHHHHHhCCcEeccCCCCeEEEeCcccCCCHHHHHHHHHHHHH
Confidence 85 6 88875432 136778887753 5688999999999986666789999997 47899999999999999
Q ss_pred HHHHHH
Q 018243 349 IYAGVC 354 (359)
Q Consensus 349 ~~~~~~ 354 (359)
++++..
T Consensus 398 ~~~~~~ 403 (416)
T 1qz9_A 398 ILDRKT 403 (416)
T ss_dssp HHHHTT
T ss_pred HHhccc
Confidence 987643
No 174
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.97 E-value=1.4e-28 Score=222.56 Aligned_cols=339 Identities=13% Similarity=0.066 Sum_probs=219.3
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC----ccCCChHHHHHHHHHHHHhC--CCCeEEcCCchHHHHHHHHH
Q 018243 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD----VLMHDPTAFRLETEMAKVMG--KEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~----~~~~~~~~~~l~~~la~~~~--~~~~~~~~~gt~a~~~~l~~ 72 (359)
.++|||.++ +....+|.+.+++.+...... .....+...++++.++++++ .+..++++||++|+..++..
T Consensus 44 ~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~ 123 (448)
T 3dod_A 44 KEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHSTLLGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKM 123 (448)
T ss_dssp CEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCSCCCCSSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHH
T ss_pred CEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHH
Confidence 357899875 223345888888877544321 12335677899999999985 34568999999999999999
Q ss_pred hhhh---cC----CeEEecCCCcceeeccccccccCC------------ccceeeecCCCCCC-----------CHHHHH
Q 018243 73 HCET---RG----SEVILGDNSHIHIYENGGISTIGG------------VHPRTVKNNQDGTM-----------DIDLIE 122 (359)
Q Consensus 73 ~~~~---~g----~~vl~~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~-----------~~~~l~ 122 (359)
++.. +| ++|++.+++|..... + .....+ ..+..++.+..+.. |+++|+
T Consensus 124 ~~~~~~~~G~~~~~~vi~~~~~yhg~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 201 (448)
T 3dod_A 124 AFQYWKNIGKPEKQKFIAMKNGYHGDTI-G-AVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELA 201 (448)
T ss_dssp HHHHHHHTTCTTCCEEEEEC-------------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCCCCEEEEECCCCCCccH-H-HHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHH
Confidence 8752 44 899999998765443 1 122222 12233443333222 378899
Q ss_pred HHhcCCCCCccCCceeEEEEeccccCCCc-eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCcc
Q 018243 123 AAIRDPKGEIVYPTTRLICLENTHANCGG-RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAAD 199 (359)
Q Consensus 123 ~~l~~~~~~~~~~~~~~v~i~~~~~~ptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d 199 (359)
+.+++. ..++++|+++++.++++| .+.+.+++++|+++|++||+++|+||+|... ...+.. ........|
T Consensus 202 ~~l~~~-----~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~--g~~g~~~a~~~~~~~~d 274 (448)
T 3dod_A 202 QLLEEH-----HEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGF--GRTGKMFACEHENVQPD 274 (448)
T ss_dssp HHHHHH-----GGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTT--TTTSSSSGGGGGTCCCS
T ss_pred HHHHhC-----CCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCC--CcccchhhhhhcCCCCC
Confidence 888721 146888999887723555 5677788999999999999999999997522 122221 122222455
Q ss_pred EEEEeccccCCCc-ee-eEEecCHHHHHHHHHH----H-HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHH
Q 018243 200 SASVCLSKGLGAP-VG-SVIVGSKEFIKKARRL----R-KTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLA 271 (359)
Q Consensus 200 ~~~~s~~K~~g~~-~g-g~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~ 271 (359)
++ +++|.++++ .. |++++++++++.+... . ...+.++..+++.++++..+++...+ +.+++..++.++++
T Consensus 275 i~--t~sK~l~~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~ 352 (448)
T 3dod_A 275 LM--AAGKGITGGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLH 352 (448)
T ss_dssp EE--EECGGGGTTSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred EE--EecccccCCcCceEEEEECHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 54 567998654 13 7788898888875430 0 12345566677778888888864322 24555556666666
Q ss_pred HHHhc---CCCceEecCCccceEEEEEeccchH---------HHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHH
Q 018243 272 EGLNQ---LKGLRVDVDAVETNIVYFEITEDSK---------LYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDV 339 (359)
Q Consensus 272 ~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i 339 (359)
+.|++ .|.+... +..+.++++.+..... ....++.+.|.++||.+.|++ .++|++++..++++++
T Consensus 353 ~~l~~l~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-~~iRi~~~~~~t~e~i 429 (448)
T 3dod_A 353 FLLQDLHALPHVGDI--RQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLG-DVIAFLPPLASTAEEL 429 (448)
T ss_dssp HHHHHHTTSTTEEEE--EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEET-TEEEECCCTTCCHHHH
T ss_pred HHHHHHhcCCCeEEE--EeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEeccC-CEEEEECCCCCCHHHH
Confidence 66554 4333322 3467788888765210 014688999999999998876 8999998889999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 018243 340 HYTLSCFQKIYAGVCE 355 (359)
Q Consensus 340 ~~~~~~l~~~~~~~~~ 355 (359)
++++++|+++++++..
T Consensus 430 ~~~l~~l~~~l~~~~~ 445 (448)
T 3dod_A 430 SEMVAIMKQAIHEVTS 445 (448)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999988753
No 175
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.97 E-value=1.8e-28 Score=216.35 Aligned_cols=317 Identities=15% Similarity=0.069 Sum_probs=208.6
Q ss_pred ccccccCCC-CCChHHHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCC---CCeEEcCCchHHHHHHHHHhhhhcCC
Q 018243 4 RTVDLRSDT-VTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGK---EAGLFVPSGTMGNLISVLVHCETRGS 79 (359)
Q Consensus 4 ~~id~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~---~~~~~~~~gt~a~~~~l~~~~~~~g~ 79 (359)
.+||+.... ...+++++++++... .++......+++.+++++|. +..++++||++|+..++.++ +||
T Consensus 29 ~v~~~~~~~~~~~~~~~v~~a~~~~------~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~---~gd 99 (374)
T 2aeu_A 29 ALYDLSGLSGGFLIDEKDKALLNTY------IGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL---KPK 99 (374)
T ss_dssp GCEECSSCCCCCCCCHHHHHHHTST------THHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH---CCS
T ss_pred ceeeecccCCCCCCCHHHHHHHHHh------cCchHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC---CCC
Confidence 467777654 345558999998721 11223345677777888898 56689999999999999876 899
Q ss_pred eEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeE-EEEeccccCCCceecChhh
Q 018243 80 EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRL-ICLENTHANCGGRCLSVEY 158 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-v~i~~~~~~ptG~~~~~~~ 158 (359)
+|++++|+|.+.+.....+...|++++.+ .|++++++. + +++++ |++++ ++||||. +..+
T Consensus 100 ~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v-------~d~~~l~~~-~--------~~~~~~v~~~~-p~nptG~--~~~~ 160 (374)
T 2aeu_A 100 KVIHYLPELPGHPSIERSCKIVNAKYFES-------DKVGEILNK-I--------DKDTLVIITGS-TMDLKVI--ELEN 160 (374)
T ss_dssp EEEEECSSSSCCTHHHHHHHHTTCEEEEE-------SCHHHHHTT-C--------CTTEEEEEECB-CTTSCBC--CHHH
T ss_pred EEEEecCCCCccHHHHHHHHHcCcEEEEe-------CCHHHHHhc-C--------CCccEEEEEcc-CCCCCCC--Cccc
Confidence 99999997665432001255678888777 288888877 4 67899 88855 5669996 5678
Q ss_pred HHHHHHHHHHcCcEEEEecccccchhhhcCc-hhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHHHHHhhCCC
Q 018243 159 TDSVGEIAKKHGLKLHIDGARIFNAAVALGV-PVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGG 237 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~-~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~~~~~~~~~ 237 (359)
+++|.++|++||+++|+|++|+.+....... +... .+.|+++.|+||+++++.+|++++++++++.++.....++.+
T Consensus 161 l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~~di~~~S~sK~l~g~~~G~~~~~~~~~~~l~~~~~~~~~~ 238 (374)
T 2aeu_A 161 FKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALK--LGADLVVTSTDKLMEGPRGGLLAGKKELVDKIYIEGTKFGLE 238 (374)
T ss_dssp HHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHH--HTCSEEEEETTSSSSSCSCEEEEEEHHHHHHHHHHHHTTTCB
T ss_pred HHHHHHHHHHcCCEEEEECCcccccccccccCCccc--cCCcEEEecCcccccCcceEEEEECHHHHHHHHHhhccccCC
Confidence 9999999999999999999875542101111 1222 367899999999998776699999999999988776555443
Q ss_pred cchhHHHHHHHHHHHHHhHHHHhhhHHHH--------HHHHHHHHhcC---CCceEecCCccceE-EEEEeccchHH---
Q 018243 238 MRQVGVLCAAALVALQENVLVMLDGDHKK--------AKLLAEGLNQL---KGLRVDVDAVETNI-VYFEITEDSKL--- 302 (359)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--------~~~l~~~l~~~---~g~~~~~~~~~~~~-~~~~~~~~~~~--- 302 (359)
.++..++++..+++....+..++..++ .+.|.+.|..+ +|+.+...+ .+.+ .+..... ..
T Consensus 239 --~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~-~g~~~~~~~~~~--~~~~~ 313 (374)
T 2aeu_A 239 --AQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTP-TGFVIKRVYKDD--TINIK 313 (374)
T ss_dssp --CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECS-SEEEEEEEESSH--HHHHH
T ss_pred --CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCC-ceEEEEeecccc--ccccc
Confidence 345566666666654321122333333 34555555554 355553333 3333 3333322 11
Q ss_pred HHHHHHHHH-HhcCceeccCC-----CcEEEEEeCC-CCCHHHHHHHHHHHHHHHHHHHh
Q 018243 303 YAACLLKKL-EEHGVLVMPES-----STRVRIVVHH-QISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 303 ~~~~~~~~l-~~~gi~~~~~~-----~~~lRi~~~~-~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
+..++...+ +++||.+.|+. ..++||+++. ...+.+++++.+.|+++++++.+
T Consensus 314 ~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~~ 373 (374)
T 2aeu_A 314 KLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFK 373 (374)
T ss_dssp HHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 123365444 78999997653 3479999853 22334588999999988887653
No 176
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.97 E-value=3.3e-29 Score=225.59 Aligned_cols=334 Identities=13% Similarity=0.113 Sum_probs=223.4
Q ss_pred cccccccCCC---CCC-hHHHHHHHHHcCCCCC-CccCCChHHHHHHHHHHHHh-CCCCeEEcCCchHHHHHHHHHhhh-
Q 018243 3 TRTVDLRSDT---VTK-PTEAMRAAMASAEVDD-DVLMHDPTAFRLETEMAKVM-GKEAGLFVPSGTMGNLISVLVHCE- 75 (359)
Q Consensus 3 ~~~id~~~~~---~~~-~~~~~~~a~~~~~~~~-~~~~~~~~~~~l~~~la~~~-~~~~~~~~~~gt~a~~~~l~~~~~- 75 (359)
.+++||.++. +.+ .+|++.+++.+..... ..+.+.+...++++.+++++ +.+..++++||++|+..++..++.
T Consensus 53 ~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~v~~~~~Gsea~~~ai~~a~~~ 132 (429)
T 3k28_A 53 NEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVPSIEIVRMVNSGTEATMSALRLARGY 132 (429)
T ss_dssp CEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHH
T ss_pred CEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCCCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHh
Confidence 3579999874 233 3588888887654332 22345678899999999998 455568899999999999998764
Q ss_pred hcCCeEEecCCCcceeeccccccccCCccceeeecCCC-CC-------------CCHHHHHHHhcCCCCCccCCceeEEE
Q 018243 76 TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQD-GT-------------MDIDLIEAAIRDPKGEIVYPTTRLIC 141 (359)
Q Consensus 76 ~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~-------------~~~~~l~~~l~~~~~~~~~~~~~~v~ 141 (359)
.++++|++.+++|..... ......|.....+..+.. +. -|+++|++.++++. +++++|+
T Consensus 133 ~~~~~vi~~~~~yhg~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-----~~~~~vi 205 (429)
T 3k28_A 133 TGRNKILKFIGCYHGHGD--SLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFG-----DDIACVI 205 (429)
T ss_dssp HTCCEEEEEETCCCCSCG--GGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHG-----GGEEEEE
T ss_pred hCCCEEEEECCCcCCCcH--HHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCC-----CCEEEEE
Confidence 245678887777655443 112223322211111111 00 08899999887421 3678888
Q ss_pred EeccccCCCceec-ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEeccccCCCcee-eEE
Q 018243 142 LENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSKGLGAPVG-SVI 217 (359)
Q Consensus 142 i~~~~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~g~~~g-g~~ 217 (359)
++++.+ ++|... +.+++++|.++|++||+++|+||+|.. . ..+.. ...+....|++ ++||.++++.. |++
T Consensus 206 ~ep~~~-~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g-~--~~g~~~~~~~~~~~~di~--t~sK~~~~G~~iG~~ 279 (429)
T 3k28_A 206 VEPVAG-NMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTG-F--RVAYNCGQGYYGVTPDLT--CLGKVIGGGLPVGAY 279 (429)
T ss_dssp ECSSBC-TTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTT-T--TSSTTHHHHHHTCCCSEE--EECGGGGTTSCCEEE
T ss_pred EcCCCC-CCCcccCCHHHHHHHHHHHHHcCCEEEEeccccc-c--ccCcchHHHHhCCCCcee--hhhhhhcCCCCeEEE
Confidence 866655 566554 578899999999999999999999842 2 22321 11222245554 67799975433 788
Q ss_pred ecCHHHHHHHHHHHH-hhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcC----CCceEecCCccceEE
Q 018243 218 VGSKEFIKKARRLRK-TLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQL----KGLRVDVDAVETNIV 292 (359)
Q Consensus 218 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~----~g~~~~~~~~~~~~~ 292 (359)
++++++++.+..... ..+.++..+++.++++..+++...++.+++..++.+++++.|+++ +.+... +..+.++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~~~g~~~ 357 (429)
T 3k28_A 280 GGKAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLTPESYVEFERKAEMLEAGLRKAAEKHGIPHHI--NRAGSMI 357 (429)
T ss_dssp EECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEE--EEETTEE
T ss_pred EEcHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEE--EeeccEE
Confidence 889998877543221 234455667777888888886433446677777888887777663 333222 3467777
Q ss_pred EEEeccc-----------hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 293 YFEITED-----------SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 293 ~~~~~~~-----------~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
++.+..+ ......++.+.|.++||.+.+++...+|+++ .++++++++++++|+++++++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~r~~~--~~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 358 GIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPPSQFEGLFLST--VHSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp EEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTTSCBCCCT--TCCHHHHHHHHHHHHHHHHTC
T ss_pred EEEEecCCcccccccccccHHHHHHHHHHHHHCCeEEecCCCCCEEEEC--CCCHHHHHHHHHHHHHHHHHH
Confidence 7776421 1234578889999999999998778888865 799999999999999998765
No 177
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.97 E-value=9.6e-29 Score=223.95 Aligned_cols=339 Identities=15% Similarity=0.109 Sum_probs=224.4
Q ss_pred ccccccCCC----CCChHHHHHHHHHcCCCCCC--c--cCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHHh
Q 018243 4 RTVDLRSDT----VTKPTEAMRAAMASAEVDDD--V--LMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~----~~~~~~~~~~a~~~~~~~~~--~--~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~~ 73 (359)
.++||.++. ...++|++.+++.+...... . ....+...++++.++++++. +..++++||++|+..++..+
T Consensus 51 ~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~ 130 (449)
T 3a8u_X 51 KVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLDYSPGFQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVKMV 130 (449)
T ss_dssp EEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCSCCCSSSCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHH
T ss_pred EEEECCccHhhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHH
Confidence 468887543 23336899999887654321 1 23356678999999999954 34588899999999999887
Q ss_pred hh-------hcCCeEEecCCCcceeeccccccccCCc------------cceeeecCCCC-----CCC--------HHHH
Q 018243 74 CE-------TRGSEVILGDNSHIHIYENGGISTIGGV------------HPRTVKNNQDG-----TMD--------IDLI 121 (359)
Q Consensus 74 ~~-------~~g~~vl~~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~-----~~~--------~~~l 121 (359)
.. .++++|++.+++|..... ......|. .+..++.+..+ .+| +++|
T Consensus 131 ~~~~~~~g~~~~~~vi~~~~~yhg~~~--~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~l 208 (449)
T 3a8u_X 131 RAYWRLKGQATKTKMIGRARGYHGVNI--AGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADEL 208 (449)
T ss_dssp HHHHHHTTCTTCCEEEEETTCCCCSSH--HHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHH
T ss_pred HHHHHhcCCCCCCEEEEECCCcCCCCh--hhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHH
Confidence 63 156889998888765443 11222221 12333322111 246 8999
Q ss_pred HHHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccc-cchhhhcCchhHhhhcCcc
Q 018243 122 EAAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARI-FNAAVALGVPVRRLVQAAD 199 (359)
Q Consensus 122 ~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~-~~~~~~~~~~~~~~~~~~d 199 (359)
++.+++.. .+++++|++++ .+|+||. ..+.+++++|.++|++||+++|+||+|. ++..+ .......+....|
T Consensus 209 e~~l~~~~----~~~~~~vi~~p-~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g-~~~~~~~~~~~~d 282 (449)
T 3a8u_X 209 LKLIELHD----ASNIAAVFVEP-LAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTG-SMFGADSFGVTPD 282 (449)
T ss_dssp HHHHHHHC----GGGEEEEEECS-SBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS-SSSHHHHHTCCCS
T ss_pred HHHHHhcC----CCCEEEEEEcC-ccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccC-cchhhhhcCCCCC
Confidence 99987310 02567887754 4557997 5568999999999999999999999984 43221 1111222222457
Q ss_pred EEEEeccccCCCc-e-eeEEecCHHHHHHHHHHHH-------hhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHH
Q 018243 200 SASVCLSKGLGAP-V-GSVIVGSKEFIKKARRLRK-------TLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKL 269 (359)
Q Consensus 200 ~~~~s~~K~~g~~-~-gg~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~ 269 (359)
++ |+||+++++ . .|++++++++++.+..... ..+.++..+++.++++..+++...+ ...++..++.++
T Consensus 283 i~--s~sK~l~~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~ 360 (449)
T 3a8u_X 283 LM--CIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPH 360 (449)
T ss_dssp EE--EECGGGGTTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred EE--EEcccccCCCCceEEEEECHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 55 777999753 1 2557778888877653211 1234455566667777777754332 356677788889
Q ss_pred HHHHHhcCCCceEe-cCCccceEEEEEeccch-HH--HHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHH
Q 018243 270 LAEGLNQLKGLRVD-VDAVETNIVYFEITEDS-KL--YAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSC 345 (359)
Q Consensus 270 l~~~l~~~~g~~~~-~~~~~~~~~~~~~~~~~-~~--~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~ 345 (359)
+++.|++++.+... ..+..++++++.++... .. +..++.+.|.++||.+.+++ .++|++++..++++++++++++
T Consensus 361 l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRis~~~~~t~~~i~~~l~~ 439 (449)
T 3a8u_X 361 FEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGG-DTLQFGPTFNSKPQDLDRLFDA 439 (449)
T ss_dssp HHHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEET-TEEEECCCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEecCC-CEEEEECCCcCCHHHHHHHHHH
Confidence 99988875323211 11346788999887521 11 33478899988999998876 8999998889999999999999
Q ss_pred HHHHHHHH
Q 018243 346 FQKIYAGV 353 (359)
Q Consensus 346 l~~~~~~~ 353 (359)
|+++++++
T Consensus 440 l~~~l~~~ 447 (449)
T 3a8u_X 440 VGEVLNKL 447 (449)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 99998764
No 178
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.97 E-value=7.2e-28 Score=221.04 Aligned_cols=313 Identities=16% Similarity=0.160 Sum_probs=209.2
Q ss_pred CccCCChHHHHHH----HHHHHHhCCC----CeEEcCCchHHHHHHHHHhhh-------hcC-----C-eEEecCCCcce
Q 018243 32 DVLMHDPTAFRLE----TEMAKVMGKE----AGLFVPSGTMGNLISVLVHCE-------TRG-----S-EVILGDNSHIH 90 (359)
Q Consensus 32 ~~~~~~~~~~~l~----~~la~~~~~~----~~~~~~~gt~a~~~~l~~~~~-------~~g-----~-~vl~~~~~~~~ 90 (359)
..|..++....+| +.+++++|.+ ..++++|||+|+..++.++.. ++| + .|+++.++|++
T Consensus 122 ~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s 201 (504)
T 2okj_A 122 FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYS 201 (504)
T ss_dssp SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH
T ss_pred CchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHH
Confidence 3455566655554 4568888987 348889999999999998863 245 5 78999999998
Q ss_pred eeccccccccCCc---cceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHH
Q 018243 91 IYENGGISTIGGV---HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAK 167 (359)
Q Consensus 91 ~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~ 167 (359)
..+ + +...|. +++.++.+.++.+|+++|++.+++.... ..++++|++ +.++||||.+.+ +++|.++|+
T Consensus 202 ~~~-~--~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~--g~~~~~V~~-~~~~~~tG~i~~---l~~I~~la~ 272 (504)
T 2okj_A 202 IKK-A--GAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQK--GYVPFYVNA-TAGTTVYGAFDP---IQEIADICE 272 (504)
T ss_dssp HHH-H--HHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHT--TCEEEEEEE-CBSCSSSCCBCC---HHHHHHHHH
T ss_pred HHH-H--HHHcCCCcccEEEEecCCCCCCCHHHHHHHHHHHHHC--CCCceEEEE-eCCCCCCCCcCC---HHHHHHHHH
Confidence 765 2 444454 7888888888999999999999731000 025788888 556669999765 899999999
Q ss_pred HcCcEEEEecccccchhhhcCc-hhHhhhcCccEEEEeccccCCCcee-eEEecCH-HHHHHHHH-HHHhh-CCCc----
Q 018243 168 KHGLKLHIDGARIFNAAVALGV-PVRRLVQAADSASVCLSKGLGAPVG-SVIVGSK-EFIKKARR-LRKTL-GGGM---- 238 (359)
Q Consensus 168 ~~~~~li~D~a~~~~~~~~~~~-~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~-~~~~~~~~-~~~~~-~~~~---- 238 (359)
+||+++|+|++|+.+....... ....-...+|++++++||++++|.+ |+++.++ ++.+.... ...+. +...
T Consensus 273 ~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 352 (504)
T 2okj_A 273 KYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDV 352 (504)
T ss_dssp HHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCG
T ss_pred HcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccC
Confidence 9999999999986655432111 1111113789999999999998876 7777654 55554211 11111 0000
Q ss_pred -------------chhHHHHHHHHHHH-HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecC-CccceEEEEEe-ccc---
Q 018243 239 -------------RQVGVLCAAALVAL-QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVD-AVETNIVYFEI-TED--- 299 (359)
Q Consensus 239 -------------~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~~~~~~~~~~-~~~--- 299 (359)
+......++++.++ ....++..++..++++++.+.|++.|++++..+ +....++.|.. +..
T Consensus 353 ~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~ 432 (504)
T 2okj_A 353 SYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRG 432 (504)
T ss_dssp GGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSS
T ss_pred cCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccc
Confidence 11122333334444 234445777888999999999999989998642 12444444543 320
Q ss_pred ----hH------HHHHHHHHHHHhcCceecc----CC-CcEEEEEeC-CCCCHHHHHHHHHHHHHHHHHH
Q 018243 300 ----SK------LYAACLLKKLEEHGVLVMP----ES-STRVRIVVH-HQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 300 ----~~------~~~~~~~~~l~~~gi~~~~----~~-~~~lRi~~~-~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.. ....++.+.|.++|+.+.. .+ ..++|+++. +.++++++++++++|+++++++
T Consensus 433 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 433 VPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp CCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred cccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 00 0145788899888864322 12 258999985 7899999999999999887654
No 179
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.97 E-value=4e-28 Score=215.42 Aligned_cols=283 Identities=16% Similarity=0.104 Sum_probs=209.7
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018243 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.+...++++.+++++|.+..++++||++|+..++. ++ ++||+|+++.+.|.+.+... ..++..|.+++.++.+
T Consensus 54 ~~~~~~lr~~la~~~g~~~~i~~~sGt~a~~~al~-~~-~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~---- 127 (393)
T 1n8p_A 54 NPNRENLERAVAALENAQYGLAFSSGSATTATILQ-SL-PQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDL---- 127 (393)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHH-TS-CSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSH----
T ss_pred ChhHHHHHHHHHHHhCCCcEEEECChHHHHHHHHH-Hc-CCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCC----
Confidence 56789999999999999888999999999999999 66 59999999999987654310 1256678899888765
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc----CcEEEEecccccchhhhcCchh
Q 018243 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH----GLKLHIDGARIFNAAVALGVPV 191 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~----~~~li~D~a~~~~~~~~~~~~~ 191 (359)
| +++++.++ +++++|+++++ +||||.+++ +++|.++|+++ |+++|+|++|+.+... ..
T Consensus 128 -d-~~l~~~i~--------~~t~lv~~~~~-~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~----~~ 189 (393)
T 1n8p_A 128 -L-NDLPQLIK--------ENTKLVWIETP-TNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS----NP 189 (393)
T ss_dssp -H-HHHHHHSC--------SSEEEEEECSS-CTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC----CG
T ss_pred -h-HHHHHhcc--------cCceEEEEECC-CCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC----CH
Confidence 7 88999988 68999999555 559999987 89999999999 9999999998655432 22
Q ss_pred HhhhcCccEEEEeccccCCCce---eeEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHH
Q 018243 192 RRLVQAADSASVCLSKGLGAPV---GSVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKA 267 (359)
Q Consensus 192 ~~~~~~~d~~~~s~~K~~g~~~---gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 267 (359)
..+ +.|+++.|+||++|+++ ||++++ ++++.+.+......++.+. ++..++++..+++.... ++++..+++
T Consensus 190 ~~~--~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~--~~~~~~~~~~~l~~~~~-~~~~~~~~~ 264 (393)
T 1n8p_A 190 LNF--GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIP--SPFDAWLTHRGLKTLHL-RVRQAALSA 264 (393)
T ss_dssp GGG--TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCC--CHHHHHHHHHHHTTHHH-HHHHHHHHH
T ss_pred HHc--CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCC--CHHHHHHHHhccchHHH-HHHHHHHHH
Confidence 222 68999999999998653 488887 5888888877766666554 34444445555654433 667777888
Q ss_pred HHHHHHHhcCCC-ce-EecCC---------------c-c-ceEEEEEeccchHHHHHHHHHHHHhcCceeccC-------
Q 018243 268 KLLAEGLNQLKG-LR-VDVDA---------------V-E-TNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE------- 321 (359)
Q Consensus 268 ~~l~~~l~~~~g-~~-~~~~~---------------~-~-~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~------- 321 (359)
..+.+.|++.+. +. +..+. . . ++++++.++.. ..+...+.+.|...++.+..+
T Consensus 265 ~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~-~~~~~~~l~~l~~~~~~~s~G~~~s~~~ 343 (393)
T 1n8p_A 265 NKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGG-AEAASKFASSTRLFTLAESLGGIESLLE 343 (393)
T ss_dssp HHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSC-HHHHHHHHHHCSSSEECSCCCCSSCEEE
T ss_pred HHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCc-HHHHHHHHhhCCcceECCCCCCCcceee
Confidence 889999988755 43 21221 1 3 67888998752 246677777775444332111
Q ss_pred --------------------CCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018243 322 --------------------SSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 322 --------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
..+.+|++++...++++++.+.++|+++
T Consensus 344 ~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 344 VPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp CTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred ccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 1468999999888888899888888764
No 180
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.97 E-value=2.3e-28 Score=220.31 Aligned_cols=338 Identities=15% Similarity=0.080 Sum_probs=212.9
Q ss_pred cccccccCC---CCCCh-HHHHHHHHHcCCCCCC----ccCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHHH
Q 018243 3 TRTVDLRSD---TVTKP-TEAMRAAMASAEVDDD----VLMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~---~~~~~-~~~~~~a~~~~~~~~~----~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~~ 72 (359)
.+++||.++ ++.+. +|++.+++.+...... .....+...++++.++++++. +..++++||++|+..++..
T Consensus 29 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~ 108 (430)
T 3i4j_A 29 RRYLDGSSGALVANIGHGRAEVGERMAAQAARLPFVHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKL 108 (430)
T ss_dssp CEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHH
T ss_pred CEEEECCCchhccccCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHH
Confidence 357899885 33333 5888888776432211 123456778999999999965 3468888999999999998
Q ss_pred hhhh-------cCCeEEecCCCcceeeccccccccCCc--------------cceeeecCCC---CCCCHHHHHHHhcCC
Q 018243 73 HCET-------RGSEVILGDNSHIHIYENGGISTIGGV--------------HPRTVKNNQD---GTMDIDLIEAAIRDP 128 (359)
Q Consensus 73 ~~~~-------~g~~vl~~~~~~~~~~~~~~~~~~~g~--------------~~~~v~~~~~---~~~~~~~l~~~l~~~ 128 (359)
++.. .++.|++.+++|..... ......+. .+..++.+.. +..|+++|++.+++.
T Consensus 109 ~~~~~~~~g~~~~~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~ 186 (430)
T 3i4j_A 109 ARQYHVERGEPGRFKVITRVPSYHGASL--GSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLERE 186 (430)
T ss_dssp HHHHHHHTTCTTCCEEEEETTC---------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHH
T ss_pred HHHHHHhcCCCCCcEEEEEeCCcCCCCc--ccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhc
Confidence 8741 36789999988766443 11222221 3333433322 223568888888731
Q ss_pred CCCccCCceeEEEEeccccC-CCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc--hhHhh-hcCccEEEE
Q 018243 129 KGEIVYPTTRLICLENTHAN-CGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV--PVRRL-VQAADSASV 203 (359)
Q Consensus 129 ~~~~~~~~~~~v~i~~~~~~-ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~-~~~~d~~~~ 203 (359)
. ..++++|++++ .++ ++|. +++.+++++|.++|++||+++|+||+|.... ..+. ....+ ....|++
T Consensus 187 ~----~~~~~~vi~~p-~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~--~~g~~~~~~~~~~~~~di~-- 257 (430)
T 3i4j_A 187 G----PETVAAFMAEP-VVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMG--RCGSPLALSRWSGVTPDIA-- 257 (430)
T ss_dssp C----GGGEEEEEECS-SCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTT--TTSSSSGGGGTTTCCCSEE--
T ss_pred C----CCCEEEEEEcC-cccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCC--cccchhhhhhhcCCCCcEE--
Confidence 0 03566777744 555 6776 6677889999999999999999999975221 2222 11122 2234555
Q ss_pred eccccCCCc-ee-eEEecCHHHHHHHHHHHH--hhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHh---
Q 018243 204 CLSKGLGAP-VG-SVIVGSKEFIKKARRLRK--TLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLN--- 275 (359)
Q Consensus 204 s~~K~~g~~-~g-g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~--- 275 (359)
++||.++++ .. |++++++++++.+..... ..+.++..+++.++++..+++...+ +..++..++.+++++.|+
T Consensus 258 t~sK~l~~G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~ 337 (430)
T 3i4j_A 258 VLGKGLAAGYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQ 337 (430)
T ss_dssp EECGGGTTTSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcccccCCccccEEEEECHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHH
Confidence 567999753 22 778889999888754311 2344555667777777777764322 244455555555555554
Q ss_pred -cCCCceEecCCccceEEEEEeccch-------HHHHHHHHHHHHhcCceeccC-------CCcEEEEEeCCCCCHHHHH
Q 018243 276 -QLKGLRVDVDAVETNIVYFEITEDS-------KLYAACLLKKLEEHGVLVMPE-------SSTRVRIVVHHQISANDVH 340 (359)
Q Consensus 276 -~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~gi~~~~~-------~~~~lRi~~~~~~~~~~i~ 340 (359)
+.|++... +..++++++.+.+.. .....++.+.|.++||.+.++ +..++||+++...++++++
T Consensus 338 ~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~ 415 (430)
T 3i4j_A 338 ARFPQMMQV--RGTGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVD 415 (430)
T ss_dssp HHCTTEEEE--EEETTEEEEEEC------------CHHHHHHHHHHTTEECC-----------CEEEECCCTTCCHHHHH
T ss_pred HhCCCeEEE--EEEEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHH
Confidence 45566543 346778888775311 112367899999999999876 3678999998889999999
Q ss_pred HHHHHHHHHHHHH
Q 018243 341 YTLSCFQKIYAGV 353 (359)
Q Consensus 341 ~~~~~l~~~~~~~ 353 (359)
+++++|+++++++
T Consensus 416 ~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 416 GLLALLAGALEDV 428 (430)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998865
No 181
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.97 E-value=4.2e-28 Score=218.83 Aligned_cols=310 Identities=19% Similarity=0.165 Sum_probs=217.5
Q ss_pred HHHHHHHHcCCCCCCccCCChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhh--------hhcCCeEEecCCCcc
Q 018243 18 EAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHC--------ETRGSEVILGDNSHI 89 (359)
Q Consensus 18 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~--------~~~g~~vl~~~~~~~ 89 (359)
+++.+++.+.... ..|..++...++++.+++++|.+..++++||++|+..++.++. .++|++|+++.++|.
T Consensus 43 ~~~~~a~~~~~~~-~~~~~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~ 121 (437)
T 3bb8_A 43 TKELQLMVEASLD-GWLTTGRFNDAFEKKLGEYLGVPYVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFP 121 (437)
T ss_dssp HHHHHHHHHHHHH-CCCBSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCH
T ss_pred HHHHHHHHHHHHc-CCcCCChHHHHHHHHHHHHHCCCcEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcH
Confidence 4555555543322 2355678899999999999999988999999999999999882 358999999999998
Q ss_pred eeeccccccccCCccceeeecCC-CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHH
Q 018243 90 HIYENGGISTIGGVHPRTVKNNQ-DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKK 168 (359)
Q Consensus 90 ~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~ 168 (359)
+... .+...|++++.++.+. ++.+|++++++.++ +++++|++++.++ .+ .++++|.++|++
T Consensus 122 ~~~~---~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~--------~~~~~v~~~~~~g----~~---~~~~~i~~l~~~ 183 (437)
T 3bb8_A 122 TTVN---PTIQNGLIPVFVDVDIPTYNVNASLIEAAVS--------DKTKAIMIAHTLG----NL---FDLAEVRRVADK 183 (437)
T ss_dssp HHHH---HHHHTTCEEEECCEETTTTEECGGGHHHHCC--------TTEEEEEEECGGG----CC---CCHHHHHHHHHH
T ss_pred HHHH---HHHHcCCEEEEEeccCccCCcCHHHHHHhcC--------CCCeEEEEeCCCC----Ch---hcHHHHHHHHHH
Confidence 8765 2566888999887764 68889999999998 6889999865443 33 358999999999
Q ss_pred cCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccc--cCCCceeeEEecCHHH-HHHHHHHHHh------------
Q 018243 169 HGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSK--GLGAPVGSVIVGSKEF-IKKARRLRKT------------ 233 (359)
Q Consensus 169 ~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K--~~g~~~gg~~~~~~~~-~~~~~~~~~~------------ 233 (359)
+|+++|+|++|+.|... .+. .+....|+++.|++| .++++.||+++.+++. .+.++.....
T Consensus 184 ~~~~li~D~a~~~g~~~-~~~---~~~~~~d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (437)
T 3bb8_A 184 YNLWLIEDCCDALGSTY-DGK---MAGTFGDIGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDN 259 (437)
T ss_dssp HTCEEEEECTTCTTCEE-TTE---ETTSSSSEEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC--------
T ss_pred cCCEEEEECccccCceE-CCe---ecccccCEEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCccccccccccc
Confidence 99999999999765543 222 222236777777644 4444455888887554 3333332211
Q ss_pred -------------------------hCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCc-
Q 018243 234 -------------------------LGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV- 287 (359)
Q Consensus 234 -------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~- 287 (359)
.+.+..+.++.++++..+++...+ ..++..++++++.+.|++++++.+.....
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~~~~-~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 338 (437)
T 3bb8_A 260 TCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLERIEE-FVEKRKANFKYLKDALQSCADFIELPEATE 338 (437)
T ss_dssp --------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHGGGGTTTEECCCCCT
T ss_pred ccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhccCCccccCCCCC
Confidence 111222346666666666766543 66667888999999999987776532111
Q ss_pred -c--ce-EEEEEeccchHHHHHHHHHHHHhcCceeccCCC----------------------------cEEEEEeCCCCC
Q 018243 288 -E--TN-IVYFEITEDSKLYAACLLKKLEEHGVLVMPESS----------------------------TRVRIVVHHQIS 335 (359)
Q Consensus 288 -~--~~-~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~----------------------------~~lRi~~~~~~~ 335 (359)
. +. .+.+.+..+.+.+.+++.+.|.++||.+.++.. ..+|++++..++
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t 418 (437)
T 3bb8_A 339 NSDPSWFGFPITLKEDSGVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLT 418 (437)
T ss_dssp TEECCCSSEEEEECGGGSSCHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCC
T ss_pred CCceeeEEEEEEECCcCcCcHHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCC
Confidence 1 21 122223321124678999999999998854321 139999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 018243 336 ANDVHYTLSCFQKIYA 351 (359)
Q Consensus 336 ~~~i~~~~~~l~~~~~ 351 (359)
++|+++++++|+++++
T Consensus 419 ~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 419 HDHLDYVVSKFEEFFG 434 (437)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 9999999999988764
No 182
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.97 E-value=8.8e-30 Score=231.73 Aligned_cols=332 Identities=10% Similarity=0.044 Sum_probs=224.6
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCC-----CCC----c-cCCChHHHHHHHHHHHHhCCCC--eEEcCCchHHHHHHHH
Q 018243 4 RTVDLRSDTVTKPTEAMRAAMASAEV-----DDD----V-LMHDPTAFRLETEMAKVMGKEA--GLFVPSGTMGNLISVL 71 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~-----~~~----~-~~~~~~~~~l~~~la~~~~~~~--~~~~~~gt~a~~~~l~ 71 (359)
..+.|..+....+++.+.+++.+... +.. . ....+...++++.+++++|.+. .++++|+++++..++.
T Consensus 67 ~~iyld~~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~ 146 (465)
T 3e9k_A 67 NAIYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEKEIALMNALTVNLHLLML 146 (465)
T ss_dssp BCEECBTTTSCCEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHH
T ss_pred CeEEecCCccCCChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHH
Confidence 45677776665544444443333110 000 0 1122445789999999999863 3666667777777777
Q ss_pred HhhhhcCC---eEEecCCCcceeeccc-cccccCCccce-----eeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEE
Q 018243 72 VHCETRGS---EVILGDNSHIHIYENG-GISTIGGVHPR-----TVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICL 142 (359)
Q Consensus 72 ~~~~~~g~---~vl~~~~~~~~~~~~~-~~~~~~g~~~~-----~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i 142 (359)
++. ++++ +|+++.++|.+..... ..++..|.++. .++.+.++.+|+++|++.++++ .+++++|++
T Consensus 147 ~~~-~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~-----~~~~~lv~~ 220 (465)
T 3e9k_A 147 SFF-KPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKE-----GDSIAVILF 220 (465)
T ss_dssp HHC-CCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHH-----GGGEEEEEE
T ss_pred Hhc-cccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhc-----CCCeEEEEE
Confidence 776 3554 5999999997743200 13556787763 2255667889999999999731 047889988
Q ss_pred eccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccC-CCcee-eEEecC
Q 018243 143 ENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGL-GAPVG-SVIVGS 220 (359)
Q Consensus 143 ~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~-g~~~g-g~~~~~ 220 (359)
+++ +||||.+.+ +++|.++|++||+++|+|++|+.+... .....+ ++|++++|+||++ ++|.| |+++.+
T Consensus 221 ~~~-~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g~~~---~~~~~~--~~D~~~~s~~K~l~~gp~~~g~l~~~ 291 (465)
T 3e9k_A 221 SGV-HFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVGNVE---LYLHDW--GVDFACWCSYKYLNAGAGGIAGAFIH 291 (465)
T ss_dssp ESB-CTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC---CCHHHH--TCCEEEECSSSTTCCCTTCCCEEEEC
T ss_pred eCc-ccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcCCcC---Cchhhc--CCCEEEECcccccccCCCceEEEEEc
Confidence 665 559999988 799999999999999999998765442 233333 7899999999999 46776 888888
Q ss_pred HHHHHHHHHHHH---------hh--C--CC----------cchhHHHHHHHHHHHH---H-hHHHHhhhHHHHHHHHHHH
Q 018243 221 KEFIKKARRLRK---------TL--G--GG----------MRQVGVLCAAALVALQ---E-NVLVMLDGDHKKAKLLAEG 273 (359)
Q Consensus 221 ~~~~~~~~~~~~---------~~--~--~~----------~~~~~~~~~~~~~~l~---~-~~~~~~~~~~~~~~~l~~~ 273 (359)
+++.+.+..... .+ . .. ...+....++...+++ . ..+..+++..++++++.+.
T Consensus 292 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~ 371 (465)
T 3e9k_A 292 EKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYL 371 (465)
T ss_dssp GGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 777654321100 00 0 00 0112222333333432 2 2455777788889999999
Q ss_pred HhcC----------CCceEecCC---ccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEe-CCCCCHHHH
Q 018243 274 LNQL----------KGLRVDVDA---VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVV-HHQISANDV 339 (359)
Q Consensus 274 l~~~----------~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~-~~~~~~~~i 339 (359)
|+++ +++++..+. ..++++++.++. +..++.+.|.++||.+....++++|+++ +..++++++
T Consensus 372 L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~----~~~~l~~~L~~~Gi~v~~~~~~~iRis~~~~~~t~edi 447 (465)
T 3e9k_A 372 IKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV----PNKDVFQELEKRGVVCDKRNPNGIRVAPVPLYNSFHDV 447 (465)
T ss_dssp HHHHCC---------CEEECSCSSGGGBCSCEEEEECC----TTCCHHHHHHTTTEECEEETTTEEEEBCCTTTCCHHHH
T ss_pred HHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecC----CHHHHHHHHHHCCEEEecCCCCEEEEeCcccCCCHHHH
Confidence 9884 688875432 137788888873 4568999999999999877778999998 789999999
Q ss_pred HHHHHHHHHHHHHHH
Q 018243 340 HYTLSCFQKIYAGVC 354 (359)
Q Consensus 340 ~~~~~~l~~~~~~~~ 354 (359)
+++++.|++++++..
T Consensus 448 ~~~~~~l~~~l~~~~ 462 (465)
T 3e9k_A 448 YKFTNLLTSILDSAE 462 (465)
T ss_dssp HHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999987653
No 183
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.94 E-value=1.6e-32 Score=244.51 Aligned_cols=329 Identities=12% Similarity=0.060 Sum_probs=231.0
Q ss_pred ccccccCCCCCC-hHHHHHHHHHcCCCC-CCccCCChHHHHHHHHHHHHhCC--------CCeEEcCCchHHHHHHHHHh
Q 018243 4 RTVDLRSDTVTK-PTEAMRAAMASAEVD-DDVLMHDPTAFRLETEMAKVMGK--------EAGLFVPSGTMGNLISVLVH 73 (359)
Q Consensus 4 ~~id~~~~~~~~-~~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~~--------~~~~~~~~gt~a~~~~l~~~ 73 (359)
.+|||..+.+.. ++|.+.+++.+.... ...|.. ...++++.+++++.. +..++++||++++..++..+
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~--~~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~ 109 (392)
T 3b1d_A 32 QLLPAWIADMDFEVMPEVKQAIHDYAEQLVYGYTY--ASDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAF 109 (392)
Confidence 578998887754 448899998886533 223433 277888888887632 23366777788888888888
Q ss_pred hhhcCCeEEecCCCcceeeccccccccCCccceeeecC-C--CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCC
Q 018243 74 CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN-Q--DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG 150 (359)
Q Consensus 74 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~--~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt 150 (359)
. ++|++|+++.|+|.+... .+...|.+++.++.+ . ++.+|++++++.+++ .++++|+++ .++|||
T Consensus 110 ~-~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~-------~~~~~v~~~-~~~npt 177 (392)
T 3b1d_A 110 T-KEGEAVLINSPVYPPFAR---SVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVE-------NDVKLYLLC-NPHNPG 177 (392)
Confidence 7 589999999999887664 266778888888764 2 245899999998874 467888884 557799
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhhhc---CccEEEEeccccCCCce-e-eEEecC-HHH
Q 018243 151 GRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRLVQ---AADSASVCLSKGLGAPV-G-SVIVGS-KEF 223 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~---~~d~~~~s~~K~~g~~~-g-g~~~~~-~~~ 223 (359)
|.+++.+++++|+++|++||+++|+||+|..+..... ..+...+.. +..+++.|+||.+|.++ . |+++++ +++
T Consensus 178 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 257 (392)
T 3b1d_A 178 GRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTL 257 (392)
Confidence 9999999999999999999999999999765443211 112222211 23355669999997543 2 777775 458
Q ss_pred HHHHHHHHHhhCCCcchhHHHHHHHHHHHH---HhHHHHhhhHHHHHHHHHHHHhc-CCCceEecCCccceEEEEEeccc
Q 018243 224 IKKARRLRKTLGGGMRQVGVLCAAALVALQ---ENVLVMLDGDHKKAKLLAEGLNQ-LKGLRVDVDAVETNIVYFEITED 299 (359)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~ 299 (359)
++.++.....++... .+...++++..+++ .+.++.++++.++++++.+.|++ +|++.+. ++..+.++|+.++.
T Consensus 258 ~~~~~~~~~~~~~~~-~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~i~~~~- 334 (392)
T 3b1d_A 258 CAQFKHQQLVNNHHE-VSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVM-KPQGTYLIWLDFSD- 334 (392)
Confidence 888766554442111 13333444444443 34444666777888999999988 6788764 34455566788764
Q ss_pred hHHHHHHHHHHHH-hcCceeccCC------CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018243 300 SKLYAACLLKKLE-EHGVLVMPES------STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 300 ~~~~~~~~~~~l~-~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.+.+..++.+.|. ++||.+.++. ..++|++++ .+++++++++++|+++++
T Consensus 335 ~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~--~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 335 YGLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIA--APKSLVEEICKRIVCCLP 391 (392)
Confidence 2246778999994 8999997753 457999985 568999999999988775
No 184
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.97 E-value=2.7e-28 Score=220.08 Aligned_cols=338 Identities=16% Similarity=0.094 Sum_probs=219.5
Q ss_pred ccccccCCC----CCChHHHHHHHHHcCCCCC--C-ccCCChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHHhh
Q 018243 4 RTVDLRSDT----VTKPTEAMRAAMASAEVDD--D-VLMHDPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLVHC 74 (359)
Q Consensus 4 ~~id~~~~~----~~~~~~~~~~a~~~~~~~~--~-~~~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~~~ 74 (359)
.++||.++. ...++|++.+++.+..... . .....+...++++.++++++.+ ..++++||++|+..++..+.
T Consensus 44 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~ 123 (433)
T 1zod_A 44 AILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAK 123 (433)
T ss_dssp EEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred EEEEcccchhccccCCCCHHHHHHHHHHHHhCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHH
Confidence 467886653 2233578888876643211 1 1122456789999999999753 45788899999999998765
Q ss_pred h-hcCCeEEecCCCcceeeccccc------------cccCCccceeeecCC--CC--------CCCHHHHHHHhcCCCCC
Q 018243 75 E-TRGSEVILGDNSHIHIYENGGI------------STIGGVHPRTVKNNQ--DG--------TMDIDLIEAAIRDPKGE 131 (359)
Q Consensus 75 ~-~~g~~vl~~~~~~~~~~~~~~~------------~~~~g~~~~~v~~~~--~~--------~~~~~~l~~~l~~~~~~ 131 (359)
. ..+++|++.+|+|.+... +.. ....|...+.++... .+ .+|+++|++.+++..
T Consensus 124 ~~~~~~~vi~~~~~yhg~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-- 200 (433)
T 1zod_A 124 LVTGKYEIVGFAQSWHGMTG-AAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQS-- 200 (433)
T ss_dssp HHHTCCEEEEETTCCCCSSH-HHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHC--
T ss_pred HhhCCCeEEEECCCcCCCCh-hHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcC--
Confidence 3 235789988887654332 000 001233332222111 11 135899999887310
Q ss_pred ccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc--hhHhhhcCccEEEEecccc
Q 018243 132 IVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV--PVRRLVQAADSASVCLSKG 208 (359)
Q Consensus 132 ~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~~d~~~~s~~K~ 208 (359)
.+++++|++ ++.+||||. .++.+++++|+++|++||+++|+||+|.... ..+. .........|++ |++|.
T Consensus 201 --~~~~~~vi~-~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g--~~g~~~~~~~~~~~~di~--s~sK~ 273 (433)
T 1zod_A 201 --SGNLAAFIA-EPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVG--RTGTMFACQRDGVTPDIL--TLSKT 273 (433)
T ss_dssp --CSCEEEEEE-CSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTT--TTSSSSTHHHHTCCCSEE--EECHH
T ss_pred --CCCeEEEEE-ccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC--cCchHhHHhhcCCCCCEE--Eeccc
Confidence 035677777 455668995 5678999999999999999999999986211 1121 112222245554 77899
Q ss_pred CCCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC----CCceE
Q 018243 209 LGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL----KGLRV 282 (359)
Q Consensus 209 ~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~----~g~~~ 282 (359)
|+++.+ |++++++++++.+.......+.++..+++.++++..+++...+ ...++..++++++++.|+++ |.+..
T Consensus 274 ~~~G~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 353 (433)
T 1zod_A 274 LGAGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGD 353 (433)
T ss_dssp HHTTSSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEE
T ss_pred ccCCCCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 975433 8888999988887542112224454566666666777654322 24566677777787777663 44333
Q ss_pred ecCCccceEEEEEeccch------HHHHHHHHHHHHhcCceeccCCC----cEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 283 DVDAVETNIVYFEITEDS------KLYAACLLKKLEEHGVLVMPESS----TRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~gi~~~~~~~----~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
. +..++++++.++... ..+..++.+.|.++||.+.+++. .++||+++...+++++++++++|++++++
T Consensus 354 ~--~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~ 431 (433)
T 1zod_A 354 V--RGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIER 431 (433)
T ss_dssp E--EEETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred E--EEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHHHHHH
Confidence 2 346788888775310 12467899999999999987652 78999988889999999999999998876
Q ss_pred H
Q 018243 353 V 353 (359)
Q Consensus 353 ~ 353 (359)
+
T Consensus 432 ~ 432 (433)
T 1zod_A 432 A 432 (433)
T ss_dssp H
T ss_pred h
Confidence 4
No 185
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.97 E-value=3.4e-28 Score=220.06 Aligned_cols=336 Identities=15% Similarity=0.127 Sum_probs=218.4
Q ss_pred cccccccCC---CCC-ChHHHHHHHHHcCCCCCC----ccCCChHHHHHHHHHHHHhCC---CCeEEcCCchHHHHHHHH
Q 018243 3 TRTVDLRSD---TVT-KPTEAMRAAMASAEVDDD----VLMHDPTAFRLETEMAKVMGK---EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~---~~~-~~~~~~~~a~~~~~~~~~----~~~~~~~~~~l~~~la~~~~~---~~~~~~~~gt~a~~~~l~ 71 (359)
.++|||.++ ++. ..+|++.+++.+...... ..+..+...++++.++++++. +..++++||++|+..++.
T Consensus 64 ~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk 143 (453)
T 4ffc_A 64 NSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTHTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIK 143 (453)
T ss_dssp CEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHH
T ss_pred CEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhccccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHH
Confidence 357999886 223 335888888776432211 124567778999999999973 346889999999999998
Q ss_pred Hhhhh-cCCeEEecCCCcceeeccccccccCC-------------ccceeeecCC----CCCCC--------HHHHHHHh
Q 018243 72 VHCET-RGSEVILGDNSHIHIYENGGISTIGG-------------VHPRTVKNNQ----DGTMD--------IDLIEAAI 125 (359)
Q Consensus 72 ~~~~~-~g~~vl~~~~~~~~~~~~~~~~~~~g-------------~~~~~v~~~~----~~~~~--------~~~l~~~l 125 (359)
.++.. .+++|++.+++|..... + .....+ ..+..++.+. ....+ .+.|++.+
T Consensus 144 ~a~~~~g~~~ii~~~~~yhg~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i 221 (453)
T 4ffc_A 144 VARLATGRPAVVAFDNAYHGRTN-L-TMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQI 221 (453)
T ss_dssp HHHHHHCCCEEEEETTCCCCSSH-H-HHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCEEEEEcCccCCcch-H-HHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhc
Confidence 87643 34678888887654432 1 111111 1233333331 11222 34555555
Q ss_pred cCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc--hhHhhhcCccEEEE
Q 018243 126 RDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV--PVRRLVQAADSASV 203 (359)
Q Consensus 126 ~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~~d~~~~ 203 (359)
.. ..+++|++++..++.+....+.+++++|+++|++||+++|+||+|... ...+. .........|++
T Consensus 222 ~~-------~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~--g~~g~~~a~~~~~~~pdi~-- 290 (453)
T 4ffc_A 222 GA-------QSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGF--ARTGAWFASEHEGIVPDIV-- 290 (453)
T ss_dssp CG-------GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT--TTTSSSSTHHHHTCCCSEE--
T ss_pred CC-------CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCC--CcccccchhhhcCCCcchH--
Confidence 42 467788886655533334557789999999999999999999997522 12221 122222245554
Q ss_pred eccccCCCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhc----C
Q 018243 204 CLSKGLGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQ----L 277 (359)
Q Consensus 204 s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~----~ 277 (359)
+++|.++++.. |++++++++++.+... ..+.++..+++.++++..+++...+ +..++..++.+++++.|++ .
T Consensus 291 t~sK~~~~G~~~G~~~~~~~i~~~~~~~--~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 368 (453)
T 4ffc_A 291 TMAKGIAGGMPLSAVTGRAELMDAVYAG--GLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEV 368 (453)
T ss_dssp EECGGGGTTSSCEEEEEEHHHHTTSCTT--SSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhhhcCCcCeEEEEECHHHHhhhccc--CcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhC
Confidence 56798865323 6788898888776432 2445566677777777777764322 2445555555555555544 4
Q ss_pred CCceEecCCccceEEEEEecc-----chHHHHHHHHHHHHhcCceeccCCC--cEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 278 KGLRVDVDAVETNIVYFEITE-----DSKLYAACLLKKLEEHGVLVMPESS--TRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 278 ~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~gi~~~~~~~--~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
|.+... +..+.++++.+.. +......++.+.|.++||.+.+++. ..+|++++..++++++++++++|++++
T Consensus 369 ~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l 446 (453)
T 4ffc_A 369 DIIGEV--RGRGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGTFGNVIRLLPPLVIGDDLLDEGITALSDII 446 (453)
T ss_dssp SSEEEE--EEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CCeEEE--EeeceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 544432 3467788887742 2234678899999999999988765 789999998999999999999999999
Q ss_pred HHHHh
Q 018243 351 AGVCE 355 (359)
Q Consensus 351 ~~~~~ 355 (359)
+++..
T Consensus 447 ~~~~~ 451 (453)
T 4ffc_A 447 RAKAS 451 (453)
T ss_dssp HHHC-
T ss_pred HHHHh
Confidence 88754
No 186
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-28 Score=224.67 Aligned_cols=302 Identities=18% Similarity=0.149 Sum_probs=215.3
Q ss_pred cCCChHHH----HHHHHHHHHhCCC----CeEEcCCchHHHHHHHHHhhhh----cC---CeEEecCCCcceeecccccc
Q 018243 34 LMHDPTAF----RLETEMAKVMGKE----AGLFVPSGTMGNLISVLVHCET----RG---SEVILGDNSHIHIYENGGIS 98 (359)
Q Consensus 34 ~~~~~~~~----~l~~~la~~~~~~----~~~~~~~gt~a~~~~l~~~~~~----~g---~~vl~~~~~~~~~~~~~~~~ 98 (359)
|...+... ++++.+++++|.+ ..++++||++|+..++.+++.. +| ++|+++.++|.+... .+
T Consensus 99 ~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~---~~ 175 (497)
T 3mc6_A 99 PDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDK---AA 175 (497)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHH---HH
T ss_pred cccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHH---HH
Confidence 44455544 4555577788887 3588889999999999988631 35 799999999988664 37
Q ss_pred ccCCccceeeecCC-CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 99 TIGGVHPRTVKNNQ-DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 99 ~~~g~~~~~v~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
...|++++.++.++ ++.+|+++|++.++ +++++|++++ ++||||.+.+ +++|.++|++||+++|+|+
T Consensus 176 ~~~G~~~~~v~~~~~~~~~d~~~l~~~i~--------~~~~~v~~~~-p~nptG~~~~---l~~i~~la~~~g~~livD~ 243 (497)
T 3mc6_A 176 YYFGMKLRHVELDPTTYQVDLGKVKKFIN--------KNTVLLVGSA-PNFPHGIADD---IEGLGKIAQKYKLPLHVDS 243 (497)
T ss_dssp HHSCCEEEEECBCTTTCSBCTTTTGGGCC--------SSEEEEEEET-TCTTTCCCCS---CTTTTTHHHHTTCCEEEET
T ss_pred HHcCCeEEEEecCcccCcCCHHHHHHHHh--------hCCEEEEEEC-CCCCCCcCCC---HHHHHHHHHHhCCEEEEEC
Confidence 77899999998876 78899999999998 6789998855 5559999877 7889999999999999999
Q ss_pred ccccchhhhc-----C-c-hhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHH-HHHhh-CCC-------cch
Q 018243 178 ARIFNAAVAL-----G-V-PVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARR-LRKTL-GGG-------MRQ 240 (359)
Q Consensus 178 a~~~~~~~~~-----~-~-~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~-~~~~~-~~~-------~~~ 240 (359)
+|+.+...+. + . .......++|+++.++||++++|.| |+++.+++....... ....+ +.. .+.
T Consensus 244 a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 323 (497)
T 3mc6_A 244 CLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSR 323 (497)
T ss_dssp TTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSC
T ss_pred cchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCCCcCCcCcccCC
Confidence 9764332211 0 1 1111224689999999999866666 777776554433210 00110 110 011
Q ss_pred hHH---HHHHHHHHH-HHhHHHHhhhHHHHHHHHHHHHhc-CCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcC
Q 018243 241 VGV---LCAAALVAL-QENVLVMLDGDHKKAKLLAEGLNQ-LKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHG 315 (359)
Q Consensus 241 ~~~---~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 315 (359)
+.. .+++++..+ ....++..++..++++++++.|++ +||+++..+ ..++++++.... .+..++.+.|.++|
T Consensus 324 ~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~-~~~~~v~~~~~~---~~~~~l~~~L~~~G 399 (497)
T 3mc6_A 324 PGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGN-PRYSVISFSSKT---LNIHELSDRLSKKG 399 (497)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSC-CCSSEEEEECTT---TTHHHHHHHHHTTT
T ss_pred cchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC-CCeeEEEEeCCC---CCHHHHHHHHHhCC
Confidence 111 223333333 233344777888899999999999 699998544 466677776553 47889999999999
Q ss_pred ceeccCC-CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 316 VLVMPES-STRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 316 i~~~~~~-~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
|.+.... ...+|++++ ..+++++++++++|+++++++.+
T Consensus 400 i~v~~~~~~~~~ri~~~-~~t~e~i~~~~~~L~~~l~~~~~ 439 (497)
T 3mc6_A 400 WHFNALQKPVALHMAFT-RLSAHVVDEICDILRTTVQELKS 439 (497)
T ss_dssp CBCEECCSSCCEEEECC-TTTTCTHHHHHHHHHHHHHHHTC
T ss_pred EEEecCCCCCeEEEEEe-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 9886543 456899998 78999999999999999988754
No 187
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.97 E-value=3.8e-29 Score=225.66 Aligned_cols=331 Identities=17% Similarity=0.133 Sum_probs=205.5
Q ss_pred ccccccCCCCCChHHHHHHHHHcCCCCCC-----ccCC----ChHHHHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHH
Q 018243 4 RTVDLRSDTVTKPTEAMRAAMASAEVDDD-----VLMH----DPTAFRLETEMAKVMGKE--AGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~~~~~~-----~~~~----~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~ 72 (359)
..++|..+....++|.+.+++.+...... .|.. .+...++++.+++++|.+ ..++++||++++..++..
T Consensus 18 ~~~~Ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~ 97 (432)
T 3a9z_A 18 RKVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHS 97 (432)
T ss_dssp CCEECBTTTCCCCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHH
T ss_pred CcEEeeCCccCCCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHH
Confidence 34566666555667888888876432211 1211 123579999999999985 346777778999999888
Q ss_pred hhh-------hcCCeEEecCCCcceee-------------cc-ccccccCCccceeeecCC-CCCCCHHHHHHHhcCCCC
Q 018243 73 HCE-------TRGSEVILGDNSHIHIY-------------EN-GGISTIGGVHPRTVKNNQ-DGTMDIDLIEAAIRDPKG 130 (359)
Q Consensus 73 ~~~-------~~g~~vl~~~~~~~~~~-------------~~-~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~l~~~~~ 130 (359)
+.. ++|++|+++.|+|.... .. ....+..|.+++.++.+. ++.+|+++|++.++
T Consensus 98 ~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~---- 173 (432)
T 3a9z_A 98 TVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVR---- 173 (432)
T ss_dssp HHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCC----
T ss_pred HHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhcc----
Confidence 751 37888888888765421 10 011234688898888765 67899999999998
Q ss_pred CccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcC----------cEEEEecccccchhhhcCchhHhhhcCccE
Q 018243 131 EIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHG----------LKLHIDGARIFNAAVALGVPVRRLVQAADS 200 (359)
Q Consensus 131 ~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~----------~~li~D~a~~~~~~~~~~~~~~~~~~~~d~ 200 (359)
+++++|++++ ++||||.+++ +++|.++|+++| +++|+|++|+.+.. ......+ +.|+
T Consensus 174 ----~~~~~v~~~~-~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~---~~~~~~~--~~d~ 240 (432)
T 3a9z_A 174 ----PTTCLVTIML-ANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKR---RVDVEDL--GVDF 240 (432)
T ss_dssp ----TTEEEEECCS-BCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTS---CCCHHHH--CCSE
T ss_pred ----CCceEEEEEC-cccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCCc---ccChhhc--CCCE
Confidence 6789998855 5569999998 678999999999 99999999866432 2223333 6888
Q ss_pred EEEeccccCCCceeeEEecCHHH-HHHHHHH-------HHhhCCCcchhHHHHHHHHHHH---HHhHHHHhhhHHHHHHH
Q 018243 201 ASVCLSKGLGAPVGSVIVGSKEF-IKKARRL-------RKTLGGGMRQVGVLCAAALVAL---QENVLVMLDGDHKKAKL 269 (359)
Q Consensus 201 ~~~s~~K~~g~~~gg~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~ 269 (359)
++.|+||++|. ..|+++.+++. ...++.. .....++. +....+++..++ +...++..++..+++++
T Consensus 241 ~~~s~~K~~g~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~ 317 (432)
T 3a9z_A 241 LTIVGHKFYGP-RIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTE--NTPMIAGLGKAADLVSENCETYEAHMRDIRDY 317 (432)
T ss_dssp EEEEGGGTTCC-SCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEehhHhcCC-cceEEEEccccccCCcCceeecCCccccccCCCc--CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 88899999874 46777777654 2222110 01111122 222222322233 33445567778888999
Q ss_pred HHHHHhcCCCceEec-CC-----ccceEEEEEeccchHHHHHHHHHHHH----hcCceecc-------------C-----
Q 018243 270 LAEGLNQLKGLRVDV-DA-----VETNIVYFEITEDSKLYAACLLKKLE----EHGVLVMP-------------E----- 321 (359)
Q Consensus 270 l~~~l~~~~g~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~----~~gi~~~~-------------~----- 321 (359)
+.+.|++++|+++.. .+ ..+..+++.+... +.+..++.+.+. +.|+.+.+ +
T Consensus 318 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~ 396 (432)
T 3a9z_A 318 LEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGS-QLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDV 396 (432)
T ss_dssp HHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECST-TCCHHHHHHHCSSEECBSSCGGGGGGTTSCCHHHHHTTCCHHH
T ss_pred HHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCC-CCcHHHHHHHhcCeEEeccccccCCCCCCccHHHHhcCCCccc
Confidence 999998865665421 11 1233566666541 123445555442 22332222 1
Q ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 322 SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 322 ~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
..+++|++++..++++++++++++|+++++++++
T Consensus 397 ~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~ 430 (432)
T 3a9z_A 397 ARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEG 430 (432)
T ss_dssp HTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred cCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 1368999998778999999999999999987654
No 188
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.97 E-value=3.1e-28 Score=220.72 Aligned_cols=337 Identities=15% Similarity=0.108 Sum_probs=221.5
Q ss_pred cccccccCC---CCCCh-HHHHHHHHHcCCCCCC---ccCCChHHHHHHHHHHHHhCCCC-eEEcCCchHHHHHHHHHhh
Q 018243 3 TRTVDLRSD---TVTKP-TEAMRAAMASAEVDDD---VLMHDPTAFRLETEMAKVMGKEA-GLFVPSGTMGNLISVLVHC 74 (359)
Q Consensus 3 ~~~id~~~~---~~~~~-~~~~~~a~~~~~~~~~---~~~~~~~~~~l~~~la~~~~~~~-~~~~~~gt~a~~~~l~~~~ 74 (359)
.++|||.++ ++.+. +|++.+++.+...... .....+...++++.++++++.+. .++++||++|+..++..++
T Consensus 49 ~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~ggseA~~~al~~~~ 128 (452)
T 3n5m_A 49 KRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSYFPMSQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIAR 128 (452)
T ss_dssp CEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCCCCTTSEEHHHHHHHHHHHHHHTSCEEEEEESSHHHHHHHHHHHHH
T ss_pred CEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHHhCCCCceEEEeCchHHHHHHHHHHHH
Confidence 357899887 44443 4888888877543321 12345677899999999987543 6788999999999999887
Q ss_pred hh-------cCCeEEecCCCcceeeccccccccCCc------------cceeeecCCCCC--C-C---------HHHHHH
Q 018243 75 ET-------RGSEVILGDNSHIHIYENGGISTIGGV------------HPRTVKNNQDGT--M-D---------IDLIEA 123 (359)
Q Consensus 75 ~~-------~g~~vl~~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~--~-~---------~~~l~~ 123 (359)
.. ++++|++.+++|..... ......+. ....++.+.... . | +++|++
T Consensus 129 ~~~~~~g~~~~~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~ 206 (452)
T 3n5m_A 129 QYYAQKGEPHRYKFMSRYRGYHGNTM--ATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDR 206 (452)
T ss_dssp HHHHTTTCTTCCEEEEETTCCCCSSH--HHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCcCCCCH--HHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHH
Confidence 32 56789998888765432 11222221 122222211111 1 2 789999
Q ss_pred HhcCCCCCccCCceeEEEEeccccCCCceec-ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccE
Q 018243 124 AIRDPKGEIVYPTTRLICLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADS 200 (359)
Q Consensus 124 ~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~ 200 (359)
.+++. +.+++++|+++++.+| ||..+ +.+++++|+++|++||+++|+||+|... ...+.. ........|+
T Consensus 207 ~l~~~----~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~--g~~g~~~~~~~~~~~~di 279 (452)
T 3n5m_A 207 VMTWE----LSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGF--GRTGKAFGFMNYDVKPDI 279 (452)
T ss_dssp HHHHH----CGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT--TTTSSSSGGGGTTCCCSE
T ss_pred HHHhc----CCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCC--CcccccchhhhcCCCCCE
Confidence 88710 0146888888666477 99765 7788999999999999999999997532 222221 1122224555
Q ss_pred EEEeccccCCCc-ee-eEEecCHHHHHHHHH---HHH-hhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHH
Q 018243 201 ASVCLSKGLGAP-VG-SVIVGSKEFIKKARR---LRK-TLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEG 273 (359)
Q Consensus 201 ~~~s~~K~~g~~-~g-g~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~ 273 (359)
+ +++|.++++ .. |++++++++++.+.. ... ..+.++..+++.++++..+++...+ ...++..++.+++++.
T Consensus 280 ~--t~sK~l~~G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~ 357 (452)
T 3n5m_A 280 I--TMAKGITSAYLPLSATAVKREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQ 357 (452)
T ss_dssp E--EECGGGGTTSSCCEEEEEEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred E--eecccccCCCcceEEEEECHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 5 567888653 33 778889998887632 111 2345566677777888877764322 2455566666666666
Q ss_pred Hhc----CCCceEecCCccceEEEEEeccch-------HHHHHHHHHHHHhcCceeccCC------CcEEEEEeCCCCCH
Q 018243 274 LNQ----LKGLRVDVDAVETNIVYFEITEDS-------KLYAACLLKKLEEHGVLVMPES------STRVRIVVHHQISA 336 (359)
Q Consensus 274 l~~----~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~gi~~~~~~------~~~lRi~~~~~~~~ 336 (359)
|++ .|.+... +..+.++++.+.... .....++.+.|.++||.+.+++ .+++||+++..+++
T Consensus 358 L~~~~~~~~~~~~~--~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~ 435 (452)
T 3n5m_A 358 LKEEIGEHPLVGDI--RGKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPPLVISS 435 (452)
T ss_dssp HHHHHTTCTTEEEE--EESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCCTTCCH
T ss_pred HHHHHhcCCCeEEE--EEEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECCCCCCH
Confidence 554 4444433 346666676663210 1234578889999999998876 58899998889999
Q ss_pred HHHHHHHHHHHHHHHH
Q 018243 337 NDVHYTLSCFQKIYAG 352 (359)
Q Consensus 337 ~~i~~~~~~l~~~~~~ 352 (359)
+++++++++|++++++
T Consensus 436 e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 436 EEIAFVIGTLKTAMER 451 (452)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 189
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.97 E-value=3.2e-28 Score=221.20 Aligned_cols=341 Identities=16% Similarity=0.109 Sum_probs=229.4
Q ss_pred cccccccCC---C-CCChHHHHHHHHHcCCCCCC---c-cCCChHHHHHHHHHHHHhC--CCCeEEcCCchHHHHHHHHH
Q 018243 3 TRTVDLRSD---T-VTKPTEAMRAAMASAEVDDD---V-LMHDPTAFRLETEMAKVMG--KEAGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 3 ~~~id~~~~---~-~~~~~~~~~~a~~~~~~~~~---~-~~~~~~~~~l~~~la~~~~--~~~~~~~~~gt~a~~~~l~~ 72 (359)
.++|||.++ + ....+|++.+++.+...... . ....+...++.+.++++++ .+..++++||++|+..++..
T Consensus 54 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik~ 133 (476)
T 3i5t_A 54 RRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSALRF 133 (476)
T ss_dssp CEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHHHH
T ss_pred CEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHHHHH
Confidence 357899876 2 22345888888876443211 1 2346778899999999985 45568999999999999999
Q ss_pred hhhh-------cCCeEEecCCCcceeeccccccccCCcc------------ceeeecCC--CC-CCC--------HHHHH
Q 018243 73 HCET-------RGSEVILGDNSHIHIYENGGISTIGGVH------------PRTVKNNQ--DG-TMD--------IDLIE 122 (359)
Q Consensus 73 ~~~~-------~g~~vl~~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~--~~-~~~--------~~~l~ 122 (359)
++.. .+++|++.+++|..... + .....+.. +..++.+. +. ..+ +++|+
T Consensus 134 a~~~~~~~g~~~~~~vi~~~~~yHg~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le 211 (476)
T 3i5t_A 134 SEFYNNVLGRPQKKRIIVRYDGYHGSTA-L-TAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFE 211 (476)
T ss_dssp HHHHHHHTTCTTCCEEEEETTCCCCSSH-H-HHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCEEEEEcCCcCcCCh-h-hccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHH
Confidence 8742 25678888887655432 1 12222211 12222111 11 112 77888
Q ss_pred HHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc--hhH-hhhcCc
Q 018243 123 AAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV--PVR-RLVQAA 198 (359)
Q Consensus 123 ~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~-~~~~~~ 198 (359)
+.+++.. ..++++|+++++++ ++|. +++.+++++|+++|++||+++|+||+|... +..|. ... .+...+
T Consensus 212 ~~i~~~~----~~~~aavi~ep~~~-~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~--gr~G~~~~~~~~~~v~p 284 (476)
T 3i5t_A 212 DRIESLG----PDTIAAFLAEPILA-SGGVIIPPAGYHARFKAICEKHDILYISDEVVTGF--GRCGEWFASEKVFGVVP 284 (476)
T ss_dssp HHHHHHC----GGGEEEEEECSSBT-TTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTT--TTTSSSCHHHHTTCCCC
T ss_pred HHHHhcC----CCCEEEEEECCccC-CCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCC--ccccCceeeecccCCCc
Confidence 8886310 03678888877655 6775 778899999999999999999999997532 22232 122 222245
Q ss_pred cEEEEeccccCCCc-ee-eEEecCHHHHHHHHHHH-----HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHH
Q 018243 199 DSASVCLSKGLGAP-VG-SVIVGSKEFIKKARRLR-----KTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLL 270 (359)
Q Consensus 199 d~~~~s~~K~~g~~-~g-g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l 270 (359)
|++ +++|.++++ .. |++++++++++.+.... ...+.++..+++.++++..+++...+ +.+++..++.+++
T Consensus 285 di~--t~sK~l~~G~~plg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l 362 (476)
T 3i5t_A 285 DII--TFAKGVTSGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREMADYF 362 (476)
T ss_dssp SEE--EECGGGGTTSSCCEEEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred chh--hhhhhhcCCCcCeEEEEECHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 665 556888653 22 67888999988865321 13455666778888888888865432 3566777888888
Q ss_pred HHHHhcC---CCceEecCCccceEEEEEeccchH---------HHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHH
Q 018243 271 AEGLNQL---KGLRVDVDAVETNIVYFEITEDSK---------LYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISAND 338 (359)
Q Consensus 271 ~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~ 338 (359)
++.|+++ |.+... +..+.++++.+..... .....+.+.|.++||.+.+.+ +++||+++..+++++
T Consensus 363 ~~~L~~l~~~~~v~~v--~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~p~l~~t~e~ 439 (476)
T 3i5t_A 363 AAALASLRDLPGVAET--RSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPLG-DLCVISPPLIISRAQ 439 (476)
T ss_dssp HHHHHTTTTSTTEEEE--EEETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEET-TEEEECCCTTCCHHH
T ss_pred HHHHHHHhcCCCeEEE--EecCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEecC-CEEEEECCCCCCHHH
Confidence 8888765 333332 3467777777764210 125678889989999998876 899999888999999
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 018243 339 VHYTLSCFQKIYAGVCEEN 357 (359)
Q Consensus 339 i~~~~~~l~~~~~~~~~~~ 357 (359)
+++++++|+++++++.++.
T Consensus 440 i~~~l~~l~~~l~~~~~~~ 458 (476)
T 3i5t_A 440 IDEMVAIMRQAITEVSAAH 458 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999998876543
No 190
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.97 E-value=1.1e-28 Score=224.48 Aligned_cols=324 Identities=17% Similarity=0.152 Sum_probs=223.8
Q ss_pred cccccCCCCCChHHHHHHHHHcCCCCCCccCC---Ch----HHHHHHHHHHHHhCCCCeE-EcCCchHHHHHHHHHhh--
Q 018243 5 TVDLRSDTVTKPTEAMRAAMASAEVDDDVLMH---DP----TAFRLETEMAKVMGKEAGL-FVPSGTMGNLISVLVHC-- 74 (359)
Q Consensus 5 ~id~~~~~~~~~~~~~~~a~~~~~~~~~~~~~---~~----~~~~l~~~la~~~~~~~~~-~~~~gt~a~~~~l~~~~-- 74 (359)
++.|. ..+....|.+.+++.+.......|.. ++ ...++++.+++++|.+..+ ++++|++++..++..+.
T Consensus 68 ~~~lg-~~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~ 146 (474)
T 1wyu_B 68 FYPLG-SCTMKYNPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAY 146 (474)
T ss_dssp CCCBT-TTCCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHH
T ss_pred ccccc-cccccCCHHHHHHHHHHHHhcCCCCchhhChHHHHHHHHHHHHHHHHHCCCceeecChHHHHHHHHHHHHHHHH
Confidence 34455 33333347777777664333223332 22 3567778888889988765 55778888888776653
Q ss_pred -hhcCC-----eEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccC
Q 018243 75 -ETRGS-----EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHAN 148 (359)
Q Consensus 75 -~~~g~-----~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ 148 (359)
.++|| +|+++.++|.+... .+...|++++.++.++++.+|+++|++.++ +++++|++++ +|
T Consensus 147 ~~~~Gd~~~r~~Vlv~~~~h~~~~~---~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~--------~~t~~v~~~~-pn- 213 (474)
T 1wyu_B 147 HEDRGEGRTRRVVLVPDSAHGSNPA---TASMAGYQVREIPSGPEGEVDLEALKRELG--------PHVAALMLTN-PN- 213 (474)
T ss_dssp HHHTTCTTTCCEEEEETTSCTHHHH---HHHHTTCEEEEECBCTTSSBCHHHHHHHCS--------TTEEEEEECS-SC-
T ss_pred HHhcCCccCCCEEEEeCCcChhhHH---HHHHCCCEEEEecCCCCCCcCHHHHHHhhC--------CCceEEEEEC-CC-
Confidence 24776 89999999987664 367789999999888889999999999998 6789999966 44
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCce-----e-eEEecCHH
Q 018243 149 CGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV-----G-SVIVGSKE 222 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~-----g-g~~~~~~~ 222 (359)
|+|.+. +++++|.++|++||+++|+|++|..+... ......+ ++|++++|+||+|++|. + |+++++++
T Consensus 214 ~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g--~~~~~~~--g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~ 287 (474)
T 1wyu_B 214 TLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIMG--WARPGDM--GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAH 287 (474)
T ss_dssp TTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTT--TCCHHHH--TCSEEECCTTTTTCCCCTTSCCCCCCEEECGG
T ss_pred CCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhcc--CCCcccC--CCcEEEEeCccccccCCCCCCCCeEEEEEcHH
Confidence 899872 46999999999999999999998654432 1222333 68999999999998763 3 88888888
Q ss_pred HHHHHHH-HH-----H------------hhCCCcchhHHHHHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCc
Q 018243 223 FIKKARR-LR-----K------------TLGGGMRQVGVLCAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGL 280 (359)
Q Consensus 223 ~~~~~~~-~~-----~------------~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~ 280 (359)
+++.+.. +. . .... ...+...+.+++..+. +.+++..++..++++++.+.|++. |+
T Consensus 288 l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~-g~ 365 (474)
T 1wyu_B 288 LAPYLPVPLVERGEEGFYLDFDRPKSIGRVRS-FYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK-GY 365 (474)
T ss_dssp GGGGCCSCEEEECSSCEEEECCCTTCCCCSSS-TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHhCCCCeeeccCCeeEecccCcccCccccc-CcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-Cc
Confidence 7665431 00 0 0000 1122333444444443 334445777888999999999998 88
Q ss_pred eEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceec----c-CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 281 RVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVM----P-ESSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----~-~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
++..++.....+++.++ .+.+..++.++|.++||.+. + ...+++|++++..++++++++++++|++++++
T Consensus 366 ~~~~~~~~~~~~~~~~~--~~~~~~~l~~~L~~~Gi~~~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 366 RVPYDGPSMHEFVAQPP--EGFRALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp BCSSCSSCCSCEEEBCS--TTCCHHHHHHHHHHTTCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred EecCCCCcceEEEEEcC--CCCCHHHHHHHHHHCCccccccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 76322212222455552 22467899999988899752 1 12578999998778999999999999988764
No 191
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.97 E-value=4.1e-28 Score=218.95 Aligned_cols=330 Identities=15% Similarity=0.118 Sum_probs=222.2
Q ss_pred ccccccCCCC---C-ChHHHHHHHHHcCCCCCC-ccCCChHHHHHHHHHHHHhC-CCCeEEcCCchHHHHHHHHHhhh-h
Q 018243 4 RTVDLRSDTV---T-KPTEAMRAAMASAEVDDD-VLMHDPTAFRLETEMAKVMG-KEAGLFVPSGTMGNLISVLVHCE-T 76 (359)
Q Consensus 4 ~~id~~~~~~---~-~~~~~~~~a~~~~~~~~~-~~~~~~~~~~l~~~la~~~~-~~~~~~~~~gt~a~~~~l~~~~~-~ 76 (359)
+++||.++.. . ..+|++.+++.+...... .....+...++++.++++++ .+..++++||++|+..++..++. .
T Consensus 56 ~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~v~~~~sGsea~~~ai~~a~~~~ 135 (434)
T 3l44_A 56 KYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGTPTALEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAYT 135 (434)
T ss_dssp EEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHCTTCSEEEEESSHHHHHHHHHHHHHHHH
T ss_pred EEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHHhh
Confidence 5789988642 2 345888888876543222 22346778899999999985 44568889999999999998764 2
Q ss_pred cCCeEEecCCCcceeeccccccccCCc-------------------cceeeecCCCCCCCHHHHHHHhcCCCCCccCCce
Q 018243 77 RGSEVILGDNSHIHIYENGGISTIGGV-------------------HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTT 137 (359)
Q Consensus 77 ~g~~vl~~~~~~~~~~~~~~~~~~~g~-------------------~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 137 (359)
++++|++.+++|..... ......|. .++.++.+ |+++|++.++++. +++
T Consensus 136 ~~~~vi~~~~~yhg~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~-----~~~ 203 (434)
T 3l44_A 136 GRTKIMKFAGCYHGHSD--LVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFN-----NVETLKEALDKWG-----HEV 203 (434)
T ss_dssp CCCEEEEETTCCCCSSG--GGGBC-------CCCBSSTTCCHHHHTTEEEECTT-----CHHHHHHHHHHHG-----GGE
T ss_pred CCCEEEEEcCccCCCcH--HHHhhcCCcccccCCCCcCCCCCcCCCceEecCcc-----cHHHHHHHHHhCC-----CCE
Confidence 56789998888766443 11222232 12222222 8999999987421 357
Q ss_pred eEEEEeccccCCCceec-ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEeccccCCCcee
Q 018243 138 RLICLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSKGLGAPVG 214 (359)
Q Consensus 138 ~~v~i~~~~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~g~~~g 214 (359)
++|+++++ ++++|... +.+++++|.++|++||+++|+||+|... ..+.. ...+....|++ ++||.++++..
T Consensus 204 ~~vi~ep~-~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~---~~g~~~~~~~~~~~~di~--t~sK~~~~G~~ 277 (434)
T 3l44_A 204 AAILVEPI-VGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF---RFMYGGAQDLLGVTPDLT--ALGKVIGGGLP 277 (434)
T ss_dssp EEEEECSS-BCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT---TSSSSCHHHHHTCCCSEE--EEEGGGGTTSS
T ss_pred EEEEEcCC-CCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce---eccccHHHHHcCCCCCee--ehhhhhcCCcC
Confidence 78888554 45677765 7799999999999999999999998532 22221 22222245654 66788865433
Q ss_pred -eEEecCHHHHHHHHHHHH-hhCCCcchhHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhc----CCCceEecCCc
Q 018243 215 -SVIVGSKEFIKKARRLRK-TLGGGMRQVGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQ----LKGLRVDVDAV 287 (359)
Q Consensus 215 -g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~----~~g~~~~~~~~ 287 (359)
|++++++++++.+..... ..+.++..+++.++++..+++... ++..++..++.+++++.|++ .+..... +.
T Consensus 278 iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~~ 355 (434)
T 3l44_A 278 IGAYGGKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNIDITL--NR 355 (434)
T ss_dssp CEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE--EE
T ss_pred eeeEEEcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEE--Ee
Confidence 677889998877543211 234455667777777777776432 23555666667777777665 3222222 34
Q ss_pred cceEEEEEeccc-----------hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 288 ETNIVYFEITED-----------SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 288 ~~~~~~~~~~~~-----------~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
.+.++++.+... ......++.+.|.++||.+.+++...+|+++ ..+++++++++++|+++++++.+
T Consensus 356 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~rl~~--~~t~e~i~~~l~~l~~~l~~~~~ 432 (434)
T 3l44_A 356 LKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSKYEAWFLTT--EHTKEDIEYTIEAVGRAFAALAD 432 (434)
T ss_dssp ETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSSTTCCEECCT--TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecCCCcEEEec--ccCHHHHHHHHHHHHHHHHHHHh
Confidence 677777776321 1234578889999999999998888888864 79999999999999999988765
No 192
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.97 E-value=1.4e-28 Score=217.94 Aligned_cols=295 Identities=17% Similarity=0.109 Sum_probs=207.3
Q ss_pred hHHHHHHHHHHHHhCCCCe-EEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCC--ccceeeecCCC-
Q 018243 38 PTAFRLETEMAKVMGKEAG-LFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGG--VHPRTVKNNQD- 113 (359)
Q Consensus 38 ~~~~~l~~~la~~~~~~~~-~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~~~- 113 (359)
+...++++.+++++|.+.. ++++|||+|+..++.. + .+||+|+++++.|++... ..++...| .+++.++.+.+
T Consensus 35 ~~~~~~~~~l~~~~~~~~~v~~~~sgt~a~~~~~~~-~-~~gd~vi~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~g 111 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYNAEAAVIIPGSGTYGMEAVARQ-L-TIDEDCLIIRNGWFSYRW-TQILEKGKFAKSSTVLTAERTE 111 (379)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHH-H-CTTCEEEEEECSHHHHHH-HHHHHHHCCSSEEEEEECEESS
T ss_pred HHHHHHHHHHHHHhCCCCEEEEcCChhHHHHHHHHh-C-CCCCeEEEEeCCchhHHH-HHHHHHhCCCCceEEEeccccc
Confidence 3557888889999998765 4567899999887744 4 489999999998876432 12344444 35566654321
Q ss_pred --------CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhh
Q 018243 114 --------GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAV 185 (359)
Q Consensus 114 --------~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~ 185 (359)
+.+|++++++.+++ +++++|++.+ .+|+||.++|.+++++|.++|++||+++|+|++++ |..
T Consensus 112 ~~~~~~~~~~~d~~~l~~~i~~-------~~~~~v~~~~-~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~- 181 (379)
T 3ke3_A 112 DTEAPKPFAPVDIETAVAKIKE-------DKSAIVYAPH-VETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCV- 181 (379)
T ss_dssp CCSSCCCEECCCHHHHHHHHHH-------HTCSEEEEES-EETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTC-
T ss_pred cccccCCCCCCCHHHHHHHHhh-------cCCcEEEEEe-ecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCc-
Confidence 25799999999963 4678888844 45599999999999999999999999999999986 432
Q ss_pred hcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHHH----------------h-hC---CCcchhHHH
Q 018243 186 ALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLRK----------------T-LG---GGMRQVGVL 244 (359)
Q Consensus 186 ~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~----------------~-~~---~~~~~~~~~ 244 (359)
......+ ++|++++|++|++++|.| |+++.++++.+.+..... . .+ .....+...
T Consensus 182 --~~~~~~~--~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~ 257 (379)
T 3ke3_A 182 --WLDMKEL--GIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDS 257 (379)
T ss_dssp --CCCHHHH--TCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHH
T ss_pred --ccccccc--CCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHH
Confidence 2223333 789999999999988776 899999998877643110 0 01 101122333
Q ss_pred HHHHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCc-cceEEE-EEeccchHHHHHHHHHHHHhcCcee
Q 018243 245 CAAALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAV-ETNIVY-FEITEDSKLYAACLLKKLEEHGVLV 318 (359)
Q Consensus 245 ~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~l~~~gi~~ 318 (359)
.++...+++ ...+...++..++++++++.|+++ |+++..++. .++.+. +..+. .. ..+.+.|.++||.+
T Consensus 258 ~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~~~~~---~~-~~~~~~L~~~Gi~v 332 (379)
T 3ke3_A 258 LRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVSYTER---DD-MHKGSAFAEAGLQI 332 (379)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEEECSC---HH-HHSSHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEEEEccCC---cc-hHHHHHHHHCCeEE
Confidence 333334442 224456777888999999999998 888754321 244333 33332 12 22367788899998
Q ss_pred ccCC---------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 319 MPES---------STRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 319 ~~~~---------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
.++. ...+|++++..++++|+++++++|+++++++.
T Consensus 333 ~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 333 AAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp EECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred eCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 6653 57899999888999999999999999998875
No 193
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.97 E-value=4.4e-28 Score=218.67 Aligned_cols=331 Identities=17% Similarity=0.150 Sum_probs=223.0
Q ss_pred ccccccCCC---C-CChHHHHHHHHHcCCCCCCccC-CChHHHHHHHHHHHHh-CCCCeEEcCCchHHHHHHHHHhh-hh
Q 018243 4 RTVDLRSDT---V-TKPTEAMRAAMASAEVDDDVLM-HDPTAFRLETEMAKVM-GKEAGLFVPSGTMGNLISVLVHC-ET 76 (359)
Q Consensus 4 ~~id~~~~~---~-~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~l~~~la~~~-~~~~~~~~~~gt~a~~~~l~~~~-~~ 76 (359)
.+|||.++. + ..++|.+.+++.+.......++ ..+...++++.+++++ +.+..++++||++|+..++..+. ..
T Consensus 57 ~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al~~ar~~~ 136 (434)
T 2epj_A 57 RIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYGAPGEAEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLARGYT 136 (434)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred EEEEcccchhcccCCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhh
Confidence 568998763 3 3356888888877543322222 4567789999999999 66667899999999999998742 12
Q ss_pred cCCeEEecCCCcceeecccccc------------ccCCc------cceeeecCCCCCCCHHHHHHHhcCCCCCccCCcee
Q 018243 77 RGSEVILGDNSHIHIYENGGIS------------TIGGV------HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTR 138 (359)
Q Consensus 77 ~g~~vl~~~~~~~~~~~~~~~~------------~~~g~------~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 138 (359)
++++|++.+++|..... +... ...|+ +++.++.+ |+++|++.+++.. ++++
T Consensus 137 ~~~~vi~~~~~yhg~~~-~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~-----d~~~le~~l~~~~-----~~~~ 205 (434)
T 2epj_A 137 GRDLILKFDGCYHGSHD-AVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPYN-----DVEALERVFAEYG-----DRIA 205 (434)
T ss_dssp CCCEEEEEETCCCCSSG-GGSEECC------CEESSTTCCHHHHTTEEEEETT-----CHHHHHHHHHHHG-----GGEE
T ss_pred CCCeEEEEcCCcCCCCH-HHHHhcCCCccccCCCCCCCCCCcccCceEecCCC-----CHHHHHHHHHhCC-----CCEE
Confidence 56788888877655332 1110 11232 23444433 8999999997310 2678
Q ss_pred EEEEeccccCCCceec-ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEeccccCCCce-e
Q 018243 139 LICLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSKGLGAPV-G 214 (359)
Q Consensus 139 ~v~i~~~~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~g~~~-g 214 (359)
+|++++ .+++||.+. +.+++++|.++|++||+++|+||+|. +.. .+.. ...+...+|++ |++|.++++. .
T Consensus 206 ~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~--~g~~~~~~~~~~~~di~--s~sK~l~~G~~~ 279 (434)
T 2epj_A 206 GVIVEP-VIANAGVIPPRREFLAALQRLSRESGALLILDEVVT-GFR--LGLEGAQGYFNIEGDII--VLGKIIGGGFPV 279 (434)
T ss_dssp EEEECS-SBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TTT--SSTTHHHHHHTCCCSEE--EEEGGGGTTSSC
T ss_pred EEEEeC-CcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-cee--CCcchhhHHhCCCCCee--eecchhcCCcce
Confidence 888855 445799866 68999999999999999999999986 222 1221 11222246654 7779997632 3
Q ss_pred eEEecCHHHHHHHHHHHH-hhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcCC---CceEecCCccc
Q 018243 215 SVIVGSKEFIKKARRLRK-TLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQLK---GLRVDVDAVET 289 (359)
Q Consensus 215 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~~---g~~~~~~~~~~ 289 (359)
|++++++++++.+..... ..+.++..+++.++++..+++...+ +..++..++.+++++.|+++. ++.... +..+
T Consensus 280 G~v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g 358 (434)
T 2epj_A 280 GAVAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALEEAASEVLDRTGLPYTI-NRVE 358 (434)
T ss_dssp EEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTCCEEE-EEET
T ss_pred eeeeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCcEEE-EEee
Confidence 778888888776543111 2334445566777777777754432 355667777888888887641 332211 2467
Q ss_pred eEEEEEeccc-----------hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 290 NIVYFEITED-----------SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 290 ~~~~~~~~~~-----------~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+++++.++.. ......++.+.|.++||.+.+++...+|++ ..++++++++++++|+++++++.
T Consensus 359 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~--~~~t~e~i~~~l~~l~~~l~~~~ 432 (434)
T 2epj_A 359 SMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSNLEAVFTG--LPHQGEALEIAVEGLRSSLKTVL 432 (434)
T ss_dssp TEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTTSCEECC--TTCSHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccCCCcEEEe--ccCCHHHHHHHHHHHHHHHHHHh
Confidence 7888888641 123567899999999999988876656655 47999999999999999998764
No 194
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.96 E-value=3.2e-28 Score=220.07 Aligned_cols=331 Identities=14% Similarity=0.124 Sum_probs=222.9
Q ss_pred ccccccCCC----CCChHHHHH-H-HHHc---CCCCCCcc---CCChHHHHHHHHHHHHhC---CCCeEEcCCchHHHHH
Q 018243 4 RTVDLRSDT----VTKPTEAMR-A-AMAS---AEVDDDVL---MHDPTAFRLETEMAKVMG---KEAGLFVPSGTMGNLI 68 (359)
Q Consensus 4 ~~id~~~~~----~~~~~~~~~-~-a~~~---~~~~~~~~---~~~~~~~~l~~~la~~~~---~~~~~~~~~gt~a~~~ 68 (359)
.++||.++. ....+|.+. + ++.+ .......+ ...+...++++.++++++ .+..++++||++|+..
T Consensus 55 ~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gseA~~~ 134 (449)
T 2cjg_A 55 RYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVEN 134 (449)
T ss_dssp EEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCCCCTTTCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHH
T ss_pred EEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHH
Confidence 468886653 223468888 7 7776 43222111 245667899999999985 3456888999999999
Q ss_pred HHHHhhh--h-c----------CCeEEecCCCcceeeccccccccCCc-------------cceeeecCC--CC------
Q 018243 69 SVLVHCE--T-R----------GSEVILGDNSHIHIYENGGISTIGGV-------------HPRTVKNNQ--DG------ 114 (359)
Q Consensus 69 ~l~~~~~--~-~----------g~~vl~~~~~~~~~~~~~~~~~~~g~-------------~~~~v~~~~--~~------ 114 (359)
++..+.. + + +++|++.+++|.+... ......+. .++.++.++ ..
T Consensus 135 aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 212 (449)
T 2cjg_A 135 ALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSG--YTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAA 212 (449)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSST--TGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHH
T ss_pred HHHHHHHHhcccccccccccCCCCEEEEECCCcCCccc--chhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccch
Confidence 9986541 1 2 7899999987765443 11222221 334444433 11
Q ss_pred --CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc-eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc--
Q 018243 115 --TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG-RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV-- 189 (359)
Q Consensus 115 --~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~-- 189 (359)
..++++|++.+++.. +++++|+++ +.+|||| ..++.+++++|+++|++||+++|+||+|.. +...+.
T Consensus 213 ~~~~~~~~le~~i~~~~-----~~~~~vi~e-p~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g--~g~~g~~~ 284 (449)
T 2cjg_A 213 LEAEALRQARAAFETRP-----HDIACFVAE-PIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTG--CGLTGTAW 284 (449)
T ss_dssp HHHHHHHHHHHHHHHST-----TTEEEEEEC-SEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTT--TTTTSSSS
T ss_pred hhHHHHHHHHHHHHhcC-----CceEEEEEe-CcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccC--CCccCcce
Confidence 134566888886210 578888885 4666899 588899999999999999999999999862 222222
Q ss_pred hhHhhhcCccEEEEeccccCCCceeeEEecCHHHHHHHHH--H-HHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHH
Q 018243 190 PVRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARR--L-RKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHK 265 (359)
Q Consensus 190 ~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~ 265 (359)
....+....|++ +++|++ |.|+ +++++++.+.+.. . ....+.++..+++.++++..+++...+ +..++..+
T Consensus 285 ~~~~~~~~~di~--t~sK~l--~iG~-~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~ 359 (449)
T 2cjg_A 285 AYQQLDVAPDIV--AFGKKT--QVCG-VMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQ 359 (449)
T ss_dssp THHHHTCCCSEE--EECGGG--SSEE-EEECGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred eecccCCCceEE--EecCcc--cEEE-EEECHHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 122222245655 677998 6655 5567777664221 1 112334555566777777777764332 35567778
Q ss_pred HHHHHHHHHhcC----CC-ceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHH
Q 018243 266 KAKLLAEGLNQL----KG-LRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVH 340 (359)
Q Consensus 266 ~~~~l~~~l~~~----~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~ 340 (359)
+.+++++.|+++ |. +... +..+.++++.++.. .+..++.+.|.++||.+.+++..++|++++..+++++++
T Consensus 360 ~~~~l~~~L~~l~~~~~~~~~~~--~~~g~~~~~~~~~~--~~~~~~~~~l~~~Gv~v~~~g~~~iRi~~~~~~t~e~i~ 435 (449)
T 2cjg_A 360 HGKYLRARLDELAADFPAVVLDP--RGRGLMCAFSLPTT--ADRDELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEID 435 (449)
T ss_dssp HHHHHHHHHHHHHHHSTTTSEEE--EEETTEEEEECSSH--HHHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCceeeE--eeccEEEEEEECCh--HHHHHHHHHHHHCCeEEecCCCCEEEEECCCCCCHHHHH
Confidence 888888888753 44 4433 23677888888652 356789999988999999988889999998899999999
Q ss_pred HHHHHHHHHHHHH
Q 018243 341 YTLSCFQKIYAGV 353 (359)
Q Consensus 341 ~~~~~l~~~~~~~ 353 (359)
+++++|+++++++
T Consensus 436 ~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 436 AAIAAVRSALPVV 448 (449)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998764
No 195
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.96 E-value=5e-28 Score=215.43 Aligned_cols=282 Identities=19% Similarity=0.177 Sum_probs=201.7
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018243 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.+...++++.+++++|.+..+++++|++|+..++. ++ ++||+|+++++.|.+.+... ..++..|++++.++.+
T Consensus 66 ~p~~~~l~~~la~~~g~~~~i~~~sG~~ai~~~~~-l~-~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~---- 139 (403)
T 3cog_A 66 NPTRNCLEKAVAALDGAKYCLAFASGLAATVTITH-LL-KAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCS---- 139 (403)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHT-TS-CTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTT----
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-Hh-CCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCC----
Confidence 57789999999999999888999999998888888 66 59999999999998755410 1245678898888765
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcC-cEEEEecccccchhhhcCchhHhh
Q 018243 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHG-LKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~-~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
|++++++.++ +++++|++++++ ||||.+++ +++|.++|+++| +++|+|++|..+.. ..+ +
T Consensus 140 -d~~~l~~~i~--------~~t~~v~~~~p~-nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~---~~~---~ 200 (403)
T 3cog_A 140 -KIKLLEAAIT--------PETKLVWIETPT-NPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYF---QRP---L 200 (403)
T ss_dssp -SHHHHHHHCC--------TTEEEEEEESSC-TTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTT---CCT---T
T ss_pred -CHHHHHHhcC--------cCCeEEEEECCC-CCCCeeeC---HHHHHHHHHHcCCCEEEEECCCccccc---CCc---c
Confidence 8999999998 789999996654 59999987 899999999999 99999999765432 112 1
Q ss_pred hcCccEEEEeccccCCCce---eeEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHH
Q 018243 195 VQAADSASVCLSKGLGAPV---GSVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLL 270 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~~---gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 270 (359)
..+.|+++.|+||+++++. +|++++ ++++.+.++.....++.+. ++..++++..+++.... +.++..+++..+
T Consensus 201 ~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~--~~~~~~~~~~~l~~l~~-r~~~~~~n~~~l 277 (403)
T 3cog_A 201 ALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVP--SPIDCYLCNRGLKTLHV-RMEKHFKNGMAV 277 (403)
T ss_dssp TTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCC--CHHHHHHHHHHHTTHHH-HHHHHHHHHHHH
T ss_pred ccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCC--CHHHHHHHHhhhhHHHH-HHHHHHHHHHHH
Confidence 2378999999999998765 488887 5888888877666666544 44455555566654333 556666777777
Q ss_pred HHHHhcCC--------------CceEecC--CccceEEEEEeccchHHHHHHHHHHHHhcCceec---cC----------
Q 018243 271 AEGLNQLK--------------GLRVDVD--AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVM---PE---------- 321 (359)
Q Consensus 271 ~~~l~~~~--------------g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~---~~---------- 321 (359)
.+.|++.+ ++++..+ ...++++.+.++.. .+...+.|.+.||.+. .+
T Consensus 278 ~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~----~~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~ 353 (403)
T 3cog_A 278 AQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGT----LQHAEIFLKNLKLFTLAESLGGFESLAELPA 353 (403)
T ss_dssp HHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSC----HHHHHHHHHHCSSSEECSCCSSSSCEEECTT
T ss_pred HHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCC----HHHHHHHHHhCCcceEccCCCCcceeeeccc
Confidence 77776543 3332111 12377777787652 2345556677777431 11
Q ss_pred -----------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 322 -----------------SSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 322 -----------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
..+.+|++++...++++++.+.++|++++
T Consensus 354 ~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~~~ 399 (403)
T 3cog_A 354 IMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAH 399 (403)
T ss_dssp TTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHC
T ss_pred ccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHHhh
Confidence 14689999986555566666665555443
No 196
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.96 E-value=3.3e-27 Score=216.98 Aligned_cols=309 Identities=19% Similarity=0.269 Sum_probs=208.0
Q ss_pred ccCCChHH----HHHHHHHHHHhCCC--CeEEcCCchHHHHHHHHHhhh-------hcCC------eEEecCCCcceeec
Q 018243 33 VLMHDPTA----FRLETEMAKVMGKE--AGLFVPSGTMGNLISVLVHCE-------TRGS------EVILGDNSHIHIYE 93 (359)
Q Consensus 33 ~~~~~~~~----~~l~~~la~~~~~~--~~~~~~~gt~a~~~~l~~~~~-------~~g~------~vl~~~~~~~~~~~ 93 (359)
.|..++.. .++++.+++++|.+ .+++++|||+|+..++..+.. .+|+ .|+++..+|++..+
T Consensus 139 ~~~~s~~~~~le~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~ 218 (515)
T 2jis_A 139 TYEIAPVFVLMEEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQK 218 (515)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHH
T ss_pred chhhchHHHHHHHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHH
Confidence 45556654 45556688999986 358899999999999988752 2464 78999999998775
Q ss_pred cccccccCCc---cceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcC
Q 018243 94 NGGISTIGGV---HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHG 170 (359)
Q Consensus 94 ~~~~~~~~g~---~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~ 170 (359)
+ +...|. +++.++.++++.+|+++|++.+++.... ..++++|++++ ++|+||.+.| +++|.++|++||
T Consensus 219 -~--~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~--g~~~~~Vv~~~-~~n~tG~i~~---l~~I~~la~~~g 289 (515)
T 2jis_A 219 -G--AAFLGLGTDSVRVVKADERGKMVPEDLERQIGMAEAE--GAVPFLVSATS-GTTVLGAFDP---LEAIADVCQRHG 289 (515)
T ss_dssp -H--HHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHT--TCEEEEEEEEB-SCTTTCCBCC---HHHHHHHHHHHT
T ss_pred -H--HHHcCCCCCcEEEEecCCCCcCCHHHHHHHHHHHHhC--CCCcEEEEEeC-CCCCCCCccC---HHHHHHHHHHcC
Confidence 2 555566 7888888888999999999999731000 02588888844 5569999866 899999999999
Q ss_pred cEEEEecccccchhhhcCch--hHhhhcCccEEEEeccccCCCcee-eEEecCHH--HHHHHHH-HHHhh-C--------
Q 018243 171 LKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSKGLGAPVG-SVIVGSKE--FIKKARR-LRKTL-G-------- 235 (359)
Q Consensus 171 ~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~--~~~~~~~-~~~~~-~-------- 235 (359)
+++|+|++|+.+........ ...+ .++|++++++||++++|.| |+++.+++ +.++... ...+. +
T Consensus 290 ~~l~vD~a~~~~~~~~~~~~~~~~g~-~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~ 368 (515)
T 2jis_A 290 LWLHVDAAWGGSVLLSQTHRHLLDGI-QRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVA 368 (515)
T ss_dssp CEEEEEETTGGGGGGCTTTGGGGTTG-GGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGG
T ss_pred CeEEEehhhhhHHHhChhhHhhcCCC-ccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCccccccc
Confidence 99999999876655322111 1111 3789999999999988876 77766544 6554210 01110 0
Q ss_pred --C-------CcchhHHHHHHHHHHH-HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEe-ccc-----
Q 018243 236 --G-------GMRQVGVLCAAALVAL-QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEI-TED----- 299 (359)
Q Consensus 236 --~-------~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~-~~~----- 299 (359)
. +.+...+..++++..+ ....++..++..++++++.+.|+++|++++..++ ....+.|.. +..
T Consensus 369 ~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~-~~~~v~f~~~p~~~~~~~ 447 (515)
T 2jis_A 369 LDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEP-EFVNVCFWFVPPSLRGKQ 447 (515)
T ss_dssp GCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCC-SSSEEEEEECCGGGTTCT
T ss_pred CCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC-CeeEEEEEEeCccccccc
Confidence 0 0001122222333333 2334447778889999999999999999986544 344455544 210
Q ss_pred --hHHH------HHHHHHHHHhcCceecc-----CCCcEEEEEe-CCCCCHHHHHHHHHHHHHHHHH
Q 018243 300 --SKLY------AACLLKKLEEHGVLVMP-----ESSTRVRIVV-HHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 300 --~~~~------~~~~~~~l~~~gi~~~~-----~~~~~lRi~~-~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.... ...+.+.|.+.|+.... +...++|+++ ++.++++|++++++.|++++++
T Consensus 448 ~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 448 ESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp TSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred cchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 0000 12367778788976532 2346899999 8889999999999999987754
No 197
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.96 E-value=1.1e-27 Score=217.32 Aligned_cols=340 Identities=14% Similarity=0.059 Sum_probs=221.7
Q ss_pred cccccccCC---CCCC-hHHHHHHHHHcCCCC----CC-ccCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHH
Q 018243 3 TRTVDLRSD---TVTK-PTEAMRAAMASAEVD----DD-VLMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~---~~~~-~~~~~~~a~~~~~~~----~~-~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~ 71 (359)
.++|||.++ ++.+ .+|.+.+++.+.... .. ..+..+...++++.++++++. +..++++||++|+..++.
T Consensus 51 ~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~al~ 130 (460)
T 3gju_A 51 RKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANETNIK 130 (460)
T ss_dssp CEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHH
T ss_pred CEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHH
Confidence 357899876 3333 348888887764322 11 123356778999999998854 456889999999999999
Q ss_pred Hhhh-------hcCCeEEecCCCcceeeccccccccCC------------ccceeeecCC-----CCCCC--------HH
Q 018243 72 VHCE-------TRGSEVILGDNSHIHIYENGGISTIGG------------VHPRTVKNNQ-----DGTMD--------ID 119 (359)
Q Consensus 72 ~~~~-------~~g~~vl~~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~-----~~~~~--------~~ 119 (359)
.++. ..+++|++.+++|..... + .....+ ..+..++.+. +...+ ++
T Consensus 131 ~~~~~~~~~g~~~~~~vi~~~~~yhg~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~ 208 (460)
T 3gju_A 131 LIWYYNNVLGRPEKKKIISRWRGYHGSGV-M-TGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCAD 208 (460)
T ss_dssp HHHHHHHHTTCTTCCEEEEETTCCCCSSH-H-HHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCEEEEECCCcCCCCH-H-HhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHH
Confidence 8874 146788888888755432 1 111111 1223333221 11223 57
Q ss_pred HHHHHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc--hhHhhhc
Q 018243 120 LIEAAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV--PVRRLVQ 196 (359)
Q Consensus 120 ~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~ 196 (359)
+|++.+++.. .+++++|++++ .++++|. +++.+++++|+++|++||+++|+||+|... ...+. ....+..
T Consensus 209 ~le~~i~~~~----~~~~aaii~ep-~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~--gr~g~~~~~~~~~~ 281 (460)
T 3gju_A 209 KLEEMILAEG----PETIAAFIGEP-ILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGF--GRLGTMFGSDHYGI 281 (460)
T ss_dssp HHHHHHHHHC----GGGEEEEEECS-SBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTT--TTTSSSCHHHHHTC
T ss_pred HHHHHHHhcC----CCCEEEEEECC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC--CcccccchHhhcCC
Confidence 8888886310 13678888866 4557776 667789999999999999999999997622 12221 1222222
Q ss_pred CccEEEEeccccCCCce-e-eEEecCHHHHHHHHHH----HH-hhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHH
Q 018243 197 AADSASVCLSKGLGAPV-G-SVIVGSKEFIKKARRL----RK-TLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAK 268 (359)
Q Consensus 197 ~~d~~~~s~~K~~g~~~-g-g~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~ 268 (359)
..|++ +++|.++++. . |++++++++++.+... .. ..+.++..+++.++++..+++...+ +..++..++.+
T Consensus 282 ~pdi~--t~sK~l~gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~ 359 (460)
T 3gju_A 282 KPDLI--TIAKGLTSAYAPLSGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGA 359 (460)
T ss_dssp CCSEE--EECGGGTTTSSCCEEEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred CCCee--eeehhhcCCCCCeEEEEECHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 45655 5679997631 2 7788899998887532 11 2345566677777888877764322 23444444444
Q ss_pred H----HHHHHhcCCCceEecCCccceEEEEEeccch---------HHHHHHHHHHHHhcCceeccCC-CcEEEEEeCCCC
Q 018243 269 L----LAEGLNQLKGLRVDVDAVETNIVYFEITEDS---------KLYAACLLKKLEEHGVLVMPES-STRVRIVVHHQI 334 (359)
Q Consensus 269 ~----l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~gi~~~~~~-~~~lRi~~~~~~ 334 (359)
+ |.+.+++.|.+... +..+.++++.+.... .....++.+.|.++||.+.+.+ ..++||+++...
T Consensus 360 ~~~~~l~~~l~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~~~~ 437 (460)
T 3gju_A 360 YFRAELAKAVGGHKNVGEV--RGDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMPQGDILGFAPPLCL 437 (460)
T ss_dssp HHHHHHHHHHTTSTTEEEE--EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECSSSCEEEECCCTTC
T ss_pred HHHHHHHHHHhcCCCeEEE--eeeeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCCCCCEEEEECCCCC
Confidence 4 44445555555443 346778888775421 1136688899999999998865 478999988899
Q ss_pred CHHHHHHHHHHHHHHHHHHHh
Q 018243 335 SANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 335 ~~~~i~~~~~~l~~~~~~~~~ 355 (359)
+++++++++++|+++++++.+
T Consensus 438 t~e~i~~~l~~l~~~l~~~~~ 458 (460)
T 3gju_A 438 TREQADIVVSKTADAVKSVFA 458 (460)
T ss_dssp CHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988754
No 198
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.96 E-value=1e-28 Score=217.57 Aligned_cols=318 Identities=12% Similarity=0.115 Sum_probs=215.0
Q ss_pred CccccccccCCCCCChHHHHHHHHHcCCCCC----------CccCC--ChHHHHHHHHHHHHhCCCC--e-EEc-CCchH
Q 018243 1 MVTRTVDLRSDTVTKPTEAMRAAMASAEVDD----------DVLMH--DPTAFRLETEMAKVMGKEA--G-LFV-PSGTM 64 (359)
Q Consensus 1 ~~~~~id~~~~~~~~~~~~~~~a~~~~~~~~----------~~~~~--~~~~~~l~~~la~~~~~~~--~-~~~-~~gt~ 64 (359)
|+.+++.+..+ +..+++.+++++.+..... ..++. .+...++++.+++++|.+. . +++ +||++
T Consensus 1 ~~~~~~l~~~~-~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~ 79 (362)
T 2c0r_A 1 MSERAYNFNAG-PAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGAST 79 (362)
T ss_dssp -CCCCEECCSS-SCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHH
T ss_pred CCcceeeccCC-CCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchH
Confidence 45666666665 4566688999998765321 11111 1235788899999999874 3 444 67888
Q ss_pred HHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCC--CCCHHHHHHHhcCCCCCccCCceeEE
Q 018243 65 GNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDG--TMDIDLIEAAIRDPKGEIVYPTTRLI 140 (359)
Q Consensus 65 a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~--~~~~~~l~~~l~~~~~~~~~~~~~~v 140 (359)
++..++.+++ ++||+|+++.+.|++.+. ...++..| +++.++.+ .++ .+|.++++ ++ +++++|
T Consensus 80 a~~~~~~~l~-~~gd~vl~~~~~~~~~~~-~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~--------~~t~~v 146 (362)
T 2c0r_A 80 QFAMIPMNFL-KEGQTANYVMTGSWASKA-LKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQ--------DNAAYL 146 (362)
T ss_dssp HHHHHHHHHC-CTTCEEEEEECSHHHHHH-HHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CC--------TTEEEE
T ss_pred HHHHHHHhcC-CCCCeEEEEecCcHhHHH-HHHHHHhC-CeEEEecccccccccCCCHHHcc--cC--------CCcCEE
Confidence 9999998887 599999988777665421 02355668 88888765 222 34665543 44 689999
Q ss_pred EEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEec
Q 018243 141 CLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVG 219 (359)
Q Consensus 141 ~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~ 219 (359)
++.++ +||||..++ ++++| +|+++|+|++|+.+... .. +. ..|+++.|+||++| |.| |+++.
T Consensus 147 ~~~~~-~n~tG~~~~--~l~~i------~~~~vivD~a~~~~~~~---~~---~~-~~d~~~~s~~K~~g-~~G~G~l~~ 209 (362)
T 2c0r_A 147 HLTSN-ETIEGAQFK--AFPDT------GSVPLIGDMSSDILSRP---FD---LN-QFGLVYAGAQKNLG-PSGVTVVIV 209 (362)
T ss_dssp EEESE-ETTTTEECS--SCCCC------TTSCEEEECTTTTTSSC---CC---GG-GCSEEEEETTTTTC-CSSCEEEEE
T ss_pred EEeCC-cCccceecc--ccccc------CCCEEEEEChhhccCCc---cc---hh-HCcEEEEecccccc-CcCcEEEEE
Confidence 99555 679999754 35554 89999999998765432 11 22 24888999999998 566 99998
Q ss_pred CHHHHHHHHHH------------HHhhCCCcchhHHHHHHHHHHHH---H--hHHHHhhhHHHHHHHHHHHHhcCCCc-e
Q 018243 220 SKEFIKKARRL------------RKTLGGGMRQVGVLCAAALVALQ---E--NVLVMLDGDHKKAKLLAEGLNQLKGL-R 281 (359)
Q Consensus 220 ~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~l~---~--~~~~~~~~~~~~~~~l~~~l~~~~g~-~ 281 (359)
++++++.++.. .....++. +...+.++..+++ . ..+...++..++++++.+.|++++++ +
T Consensus 210 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~--~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 287 (362)
T 2c0r_A 210 REDLVAESPKHLPTMLRYDTYVKNNSLYNTP--PSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYR 287 (362)
T ss_dssp EGGGSSSCCTTSCGGGCHHHHHHTTTCSSCC--CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSE
T ss_pred cHHHHhhccccCchHHhHHHHhhccCcCCCc--hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence 88776554321 00111222 2233333444443 3 34557788889999999999998436 7
Q ss_pred EecCC--ccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 282 VDVDA--VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 282 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+..++ ....++++.++. +.+..++.+.|.++||.+.++. .+++|++++..+++++++++++.|++++++.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~~~gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~~~~ 361 (362)
T 2c0r_A 288 GCVDVDSRSDMNITFRLAS--EELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKRSR 361 (362)
T ss_dssp ESSCGGGBCSSEEEEECSC--HHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred cCCChHHcCCcEEEEEcCC--cchHHHHHHHHHHCCCeeccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 63221 134567777764 3578899999999999887653 3479999988889999999999999887654
No 199
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.96 E-value=4e-28 Score=211.17 Aligned_cols=274 Identities=16% Similarity=0.100 Sum_probs=197.3
Q ss_pred HHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccc---cccCCccceeeecCCCCCCCH
Q 018243 42 RLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGI---STIGGVHPRTVKNNQDGTMDI 118 (359)
Q Consensus 42 ~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~---~~~~g~~~~~v~~~~~~~~~~ 118 (359)
++++.+++++|.+..+++++|++|+..++.++. ++|++|+++.++|.+... .. ....|.+++.++. .|+
T Consensus 2 ~l~~~la~~~g~~~~i~~~sG~~a~~~~~~~~~-~~g~~v~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~-----~d~ 73 (331)
T 1pff_A 2 ALEGKIAKLEHAEACAATASGMGAIAASVWTFL-KAGDHLISDDCLYGCTHA--LFEHQLRKFGVEVDFIDM-----AVP 73 (331)
T ss_dssp HHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHC-CTTCEEEEESCCCHHHHH--HHHTHHHHTTCEEEEECT-----TST
T ss_pred hHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCcchHHH--HHHHHHHhcCCEEEEeCC-----CCH
Confidence 689999999999988999999999999999887 599999999999988654 22 2457888888865 388
Q ss_pred HHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHH-cCcEEEEecccccchhhhcCchhHhhhcC
Q 018243 119 DLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKK-HGLKLHIDGARIFNAAVALGVPVRRLVQA 197 (359)
Q Consensus 119 ~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~-~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 197 (359)
+++++.++ +++++|+++++ +||||.+++ +++|.++|++ +|+++|+|++|+.+... .+. ..+
T Consensus 74 ~~l~~~i~--------~~~~~v~~~~~-~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~---~~~---~~~ 135 (331)
T 1pff_A 74 GNIEKHLK--------PNTRIVYFETP-ANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT---NPL---DLG 135 (331)
T ss_dssp THHHHTCC--------TTEEEEEEESS-CTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC---CGG---GGT
T ss_pred HHHHHhhc--------CCCeEEEEECC-CCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC---Chh---hcC
Confidence 89999888 68899999665 559999987 8999999999 99999999998655432 122 236
Q ss_pred ccEEEEeccccCCCce---eeEEecCH-HHHHHHHHHHHh-hCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHH
Q 018243 198 ADSASVCLSKGLGAPV---GSVIVGSK-EFIKKARRLRKT-LGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAE 272 (359)
Q Consensus 198 ~d~~~~s~~K~~g~~~---gg~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 272 (359)
.|+++.|+||++++|. +|++++++ ++.+.++..... .+.+. ++..+.++..+++.... +.++..++.+.+.+
T Consensus 136 ~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~ 212 (331)
T 1pff_A 136 VDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDITGAII--SPHDAWLITRGTLTLDM-RVKRAAENAQKVAE 212 (331)
T ss_dssp CSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCC--CHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred CcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhhcCCCC--CHHHHHHHHcCcchHHH-HHHHHHHHHHHHHH
Confidence 8999999999998764 57888988 888876654433 33233 33344444444443222 44445555555555
Q ss_pred HHhcC--------------CCceEecC--CccceEEEEEeccchHHHHHHHHHHHHhcCceeccC---------------
Q 018243 273 GLNQL--------------KGLRVDVD--AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE--------------- 321 (359)
Q Consensus 273 ~l~~~--------------~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~--------------- 321 (359)
.+++. |++++..+ ...++++.+.+. +.+++.+.|.++||.+...
T Consensus 213 ~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~ 287 (331)
T 1pff_A 213 FLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD-----GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASM 287 (331)
T ss_dssp HHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS-----SHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHH
T ss_pred HHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC-----CHHHHHHHHHhCCCceeccCCCCcceeeecchhh
Confidence 55443 23332111 124667777775 2456778888999965221
Q ss_pred ---------------CCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018243 322 ---------------SSTRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 322 ---------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
..+.+|++++...++++++.++++|+++
T Consensus 288 ~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 288 THAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp TSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred cccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 1478999999899999999999988754
No 200
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.96 E-value=3.3e-28 Score=220.26 Aligned_cols=294 Identities=18% Similarity=0.170 Sum_probs=201.9
Q ss_pred HHHHHHHHHHHHhCCCC-eEEcCCch-HHHHHHHHHhhh-hcCCeEEecCCCcceeeccccccccCCccceeeec---CC
Q 018243 39 TAFRLETEMAKVMGKEA-GLFVPSGT-MGNLISVLVHCE-TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN---NQ 112 (359)
Q Consensus 39 ~~~~l~~~la~~~~~~~-~~~~~~gt-~a~~~~l~~~~~-~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~ 112 (359)
...++++.+++++|.+. .+++++|| .++..++.++.. .+++.|++++++|.+..+ . ++..|++++.++. ++
T Consensus 134 ~~~~~~~~la~~~g~~~~~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~-~--~~~~G~~~~~v~~~~~~~ 210 (456)
T 2z67_A 134 LTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIK-A--VSFVGMNMRLVETVLDGD 210 (456)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH-H--HHHTTCEEEEECCEEETT
T ss_pred HHHHHHHHHHHHcCCCCCEEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHH-H--HHHcCCCceEEEEeccCC
Confidence 34668889999999976 57788888 566666766542 256678989999998665 2 6668989888765 56
Q ss_pred CCCCCHHHHHHHh-cCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchh
Q 018243 113 DGTMDIDLIEAAI-RDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPV 191 (359)
Q Consensus 113 ~~~~~~~~l~~~l-~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~ 191 (359)
++.+|+++|++.+ +... ..++.+|++ +.++||||.+.| +++|.++|+++|+++|+|+||+....+......
T Consensus 211 ~~~~d~~~l~~~i~~~~~----~~~~~~vv~-~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~ 282 (456)
T 2z67_A 211 RVYVPVEDIENAIKKEIE----LGNRPCVLS-TLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYYLEKLK 282 (456)
T ss_dssp EEECCHHHHHHHHHHHHH----TTCCEEEEE-ESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHhh----CCCeEEEEE-eCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHhhHHHH
Confidence 7889999999999 4100 035666666 556679999866 899999999999999999986543332111111
Q ss_pred HhhhcCccEEEEeccccCCCcee-eEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHH-HHhHHHHhhhHHHHHH
Q 018243 192 RRLVQAADSASVCLSKGLGAPVG-SVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVAL-QENVLVMLDGDHKKAK 268 (359)
Q Consensus 192 ~~~~~~~d~~~~s~~K~~g~~~g-g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~ 268 (359)
..+..++|++++|+||++++|.| |+++. ++++.+.+. ....+...........+++..+ ....++..++..++++
T Consensus 283 ~~~~~~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~~~l~--~~~~g~~~~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~ 360 (456)
T 2z67_A 283 KAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEIS--LSYPGRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKK 360 (456)
T ss_dssp HHHTSCCSEEEEEHHHHHCCCSSCEEEEESCHHHHHHHH--TTSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhCCCCCEEEEcCCCCcCCCCCeEEEEEcCHHHHhhcC--cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11212789999999999877776 88888 677777652 1222322111222223333333 2334457778889999
Q ss_pred HHHHHHhcCC---CceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCc---eec------------cCCCcEEEEEe
Q 018243 269 LLAEGLNQLK---GLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGV---LVM------------PESSTRVRIVV 330 (359)
Q Consensus 269 ~l~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi---~~~------------~~~~~~lRi~~ 330 (359)
++.+.|++++ |+.+.. + . +++++.+..+. ...++.+.|.++|| .+. .....++|+++
T Consensus 361 ~l~~~L~~~~~~~g~~v~~-~-~-~~v~~~~~~~~--~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~ 435 (456)
T 2z67_A 361 LLDELLNDLSKKTGGKFLD-V-E-SPIASCISVNS--DPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNA 435 (456)
T ss_dssp HHHHHHHHHHHHSSCCBCC-C-C-CSSEEEEECSS--CHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEEC
T ss_pred HHHHHHHhcccccCCEecC-C-C-CeEEEEEeccc--HHHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhh
Confidence 9999999886 766643 3 3 67777773211 14678888988875 343 22356899999
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q 018243 331 HHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 331 ~~~~~~~~i~~~~~~l~~~~ 350 (359)
+..++++++++++++|++++
T Consensus 436 ~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 436 AIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp CTTCCHHHHHHHHHHHHTC-
T ss_pred hcCCCHHHHHHHHHHHHHHh
Confidence 98899999999999998754
No 201
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.96 E-value=1.8e-28 Score=221.15 Aligned_cols=282 Identities=20% Similarity=0.227 Sum_probs=200.2
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018243 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
.+...++++.+++++|.+..+++++|++|+..++. ++ ++||+|+++.+.|.+..... ......|.+++.++.+
T Consensus 132 ~~~~~~l~~~la~~~g~~~~i~~~sGt~al~~~l~-~~-~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~---- 205 (464)
T 1ibj_A 132 NPTRDALESLLAKLDKADRAFCFTSGMAALSAVTH-LI-KNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT---- 205 (464)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHT-TS-CTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT----
T ss_pred CHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHH-Hh-CCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC----
Confidence 56678999999999999888999999998877764 55 69999999999987764300 1256678888888765
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh
Q 018243 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
|+++|++.++ +++++|++++ ++||||.+++ +++|.++|++||+++|+|++|..+.. ... ..
T Consensus 206 -d~~~l~~~i~--------~~tk~v~l~~-p~NptG~v~~---l~~i~~la~~~gi~livDea~~~g~~---~~~-~~-- 266 (464)
T 1ibj_A 206 -KLDEVAAAIG--------PQTKLVWLES-PTNPRQQISD---IRKISEMAHAQGALVLVDNSIMSPVL---SRP-LE-- 266 (464)
T ss_dssp -SHHHHHHHCC--------SSEEEEEECS-SCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTCTTT---CCG-GG--
T ss_pred -CHHHHHHHhc--------cCceEEEEeC-CCCCCCEeec---HHHHHHHHHHcCCEEEEECCCccccc---CCh-hh--
Confidence 8999999998 7899999955 5559999986 89999999999999999999855322 111 12
Q ss_pred cCccEEEEeccccCCCcee---eEEecC-HHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHH
Q 018243 196 QAADSASVCLSKGLGAPVG---SVIVGS-KEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLA 271 (359)
Q Consensus 196 ~~~d~~~~s~~K~~g~~~g---g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 271 (359)
.+.|+++.|+||+++++.| |+++++ +++.+.++......+.+. ++..++++..+++.... +.++..++...+.
T Consensus 267 ~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~--~~~~~~a~~~al~~~~~-r~~~~~~~~~~l~ 343 (464)
T 1ibj_A 267 LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGL--APFDCWLCLRGIKTMAL-RIEKQQENARKIA 343 (464)
T ss_dssp TTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBC--CHHHHHHHHHHHTTHHH-HHHHHHHHHHHHH
T ss_pred cCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCC--CHHHHHHHHhchhhHHH-HHHHHHHHHHHHH
Confidence 3689999999999986533 788877 588888877666556554 34445555555543222 3333333444444
Q ss_pred HHHhc--------------CCCceEecCC--ccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC-------------
Q 018243 272 EGLNQ--------------LKGLRVDVDA--VETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES------------- 322 (359)
Q Consensus 272 ~~l~~--------------~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~------------- 322 (359)
+.|++ +|++++..+. ..++++++.+.. ......+.+.|...||.+..++
T Consensus 344 ~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~--~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~ 421 (464)
T 1ibj_A 344 MYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS--VALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSH 421 (464)
T ss_dssp HHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSC--HHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTT
T ss_pred HHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECC--HHHHHHHHHhcCcceEeecCCCCceeeeccccccc
Confidence 44443 3455443221 236788888853 1234568888877777765442
Q ss_pred --------------CcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 323 --------------STRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 323 --------------~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.+++|+++. . ++++++++.|++++++
T Consensus 422 ~~~~~~~~~~~g~~~~~iRlsvg--~--edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 422 ASIPAEVREARGLTEDLVRISAG--I--EDVDDLISDLDIAFKT 461 (464)
T ss_dssp CSCCSSSSSSSSCCTTCEEEECC--S--SCHHHHHHHHHHHHHS
T ss_pred ccCCHHHHHhcCCCcCeEEEEeC--C--CCHHHHHHHHHHHHhh
Confidence 357999996 3 8999999999998864
No 202
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.96 E-value=4.2e-28 Score=220.06 Aligned_cols=337 Identities=14% Similarity=0.083 Sum_probs=225.2
Q ss_pred cccccccCC---CCC-ChHHHHHHHHHcCCCCCC-----ccCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHH
Q 018243 3 TRTVDLRSD---TVT-KPTEAMRAAMASAEVDDD-----VLMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~---~~~-~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~ 71 (359)
.++|||.++ ++. ..+|.+.+++.+...... .....+...++++.++++++. +..++++||++|+..+++
T Consensus 55 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~~aik 134 (472)
T 3hmu_A 55 EEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEANDTNIR 134 (472)
T ss_dssp CEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHH
T ss_pred CEEEECCCchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHH
Confidence 357999886 333 345888888876443211 122356778999999999864 456889999999999999
Q ss_pred Hhhhh-------cCCeEEecCCCcceeeccccccccCCc-----------cceeeecCC-----CCCCC--------HHH
Q 018243 72 VHCET-------RGSEVILGDNSHIHIYENGGISTIGGV-----------HPRTVKNNQ-----DGTMD--------IDL 120 (359)
Q Consensus 72 ~~~~~-------~g~~vl~~~~~~~~~~~~~~~~~~~g~-----------~~~~v~~~~-----~~~~~--------~~~ 120 (359)
.++.. .+++|++.+++|..... + .....+. .+..++.+. ++ .| +++
T Consensus 135 ~a~~~~~~~g~~~~~~ii~~~~~yHg~t~-~-~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~ 211 (472)
T 3hmu_A 135 MVRTYWQNKGQPEKTVIISRKNAYHGSTV-A-SSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARE 211 (472)
T ss_dssp HHHHHHHHTTCTTCCEEEEETTCCCCSSH-H-HHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCEEEEEcCcCCCccH-H-hhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHH
Confidence 98741 35678888887655432 1 1222221 122333221 11 23 778
Q ss_pred HHHHhcCCCCCccCCceeEEEEeccccCCCceec-ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc--hhHhhhcC
Q 018243 121 IEAAIRDPKGEIVYPTTRLICLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV--PVRRLVQA 197 (359)
Q Consensus 121 l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~ 197 (359)
|++.+++.. .+++++|+++++++ ++|... +.+++++|+++|++||+++|+||+|.... ..+. ....+...
T Consensus 212 le~~i~~~~----~~~~aavi~epv~~-~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfg--r~G~~~a~~~~~v~ 284 (472)
T 3hmu_A 212 LEEAILELG----ENRVAAFIAEPVQG-AGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFG--RTGNWFGTQTMGIR 284 (472)
T ss_dssp HHHHHHHHC----GGGEEEEEECSSBS-TTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTT--TTSSSCHHHHHTCC
T ss_pred HHHHHHhcC----CCCEEEEEEcCccC-CCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCc--ccCccchhHHhCCC
Confidence 888886310 03678888866554 677755 78999999999999999999999985321 2221 12222235
Q ss_pred ccEEEEeccccCCCce-e-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHH-HHHHHHHHH
Q 018243 198 ADSASVCLSKGLGAPV-G-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDH-KKAKLLAEG 273 (359)
Q Consensus 198 ~d~~~~s~~K~~g~~~-g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~-~~~~~l~~~ 273 (359)
+|++ +++|.++++. . |++++++++++.+.......+.++..+++.++++..+++...+ ..+++.. ++.+++++.
T Consensus 285 pdi~--t~sK~l~gg~~plG~v~~~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~ 362 (472)
T 3hmu_A 285 PHIM--TIAKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEK 362 (472)
T ss_dssp CSEE--EECGGGTTTSSCCEEEEEEHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHH
T ss_pred Ccee--eechhhhcCCcceEEEEECHHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 6666 4669887532 2 6777899998886321113455666677888888888864432 3555666 677777777
Q ss_pred HhcC---CCceEecCCccceEEEEEeccch----------HHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHH
Q 018243 274 LNQL---KGLRVDVDAVETNIVYFEITEDS----------KLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVH 340 (359)
Q Consensus 274 l~~~---~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~ 340 (359)
|+++ |.+... +..+.++.+.+..+. ......+.+.|.++||.+.+.+ +++||+++..+++++++
T Consensus 363 L~~l~~~~~v~~v--r~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~p~~~~t~e~i~ 439 (472)
T 3hmu_A 363 WEALTDHPLVGEA--KIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVG-DRMIISPPLVITPAEID 439 (472)
T ss_dssp HHGGGGSTTEEEE--EEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEET-TEEEECCCTTCCHHHHH
T ss_pred HHHHhcCCCeEEE--EecCceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEecC-CEEEEECCCCCCHHHHH
Confidence 7654 444433 346778777775421 1126688899999999998877 89999998899999999
Q ss_pred HHHHHHHHHHHHHH
Q 018243 341 YTLSCFQKIYAGVC 354 (359)
Q Consensus 341 ~~~~~l~~~~~~~~ 354 (359)
+++++|+++++++.
T Consensus 440 ~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 440 EMFVRIRKSLDEAQ 453 (472)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988764
No 203
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.96 E-value=4.3e-29 Score=219.89 Aligned_cols=317 Identities=11% Similarity=0.112 Sum_probs=216.9
Q ss_pred cccccccCCCCCChHHHHHHHHHcCCCC-----CCccCC---C----hHHHHHHHHHHHHhCCCC--e-EEcCCc-hHHH
Q 018243 3 TRTVDLRSDTVTKPTEAMRAAMASAEVD-----DDVLMH---D----PTAFRLETEMAKVMGKEA--G-LFVPSG-TMGN 66 (359)
Q Consensus 3 ~~~id~~~~~~~~~~~~~~~a~~~~~~~-----~~~~~~---~----~~~~~l~~~la~~~~~~~--~-~~~~~g-t~a~ 66 (359)
.++++|..+.. .+++.+++++.+.... ...|+. . +...++++.+++++|.+. . ++++|+ ++|+
T Consensus 2 ~~~~~~~~g~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al 80 (360)
T 1w23_A 2 KQVFNFNAGPS-ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQF 80 (360)
T ss_dssp CCCEECCSSSC-CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred CceEeecCCCc-CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHH
Confidence 35677777655 5568899999876542 112211 2 246789999999999863 3 555666 7888
Q ss_pred HHHHHHhhh--hcCCeEEecCCCcceeeccccccccCCccceeeecCC-CCCCCHHHHHH-HhcCCCCCccCCceeEEEE
Q 018243 67 LISVLVHCE--TRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQ-DGTMDIDLIEA-AIRDPKGEIVYPTTRLICL 142 (359)
Q Consensus 67 ~~~l~~~~~--~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~-~l~~~~~~~~~~~~~~v~i 142 (359)
..++..+.. ++++.|+++.++|.+.. .+...| +++.++.+. ++.+|++++++ .++ +++++|++
T Consensus 81 ~~~~~~l~~~~~~g~~vi~~~~~~~~~~----~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~--------~~~k~v~~ 147 (360)
T 1w23_A 81 TMLPMNLLTKGTIGNYVLTGSWSEKALK----EAKLLG-ETHIAASTKANSYQSIPDFSEFQLN--------ENDAYLHI 147 (360)
T ss_dssp HHHHHHHCCTTCEEEEEECSHHHHHHHH----HHHTTS-EEEEEEECGGGTSCSCCCGGGCCCC--------TTEEEEEE
T ss_pred HHHHHHhcCCCCcccEEEecchhHHHHH----HHHHhC-CeEEeecccccCcCCccchHhhccC--------CCCCEEEE
Confidence 888888874 23566788887776522 255668 888887764 55578888888 776 78999999
Q ss_pred eccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCH
Q 018243 143 ENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSK 221 (359)
Q Consensus 143 ~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~ 221 (359)
++ ++||||.+++ ++.+ +||+++|+|++|+.+... .+.. ..|+++.|+||++| +.| |+++.++
T Consensus 148 ~~-~~nptG~~~~--~i~~------~~~~~li~D~a~~~~~~~---~~~~----~~di~~~s~sK~~~-~~G~G~~~~~~ 210 (360)
T 1w23_A 148 TS-NNTIYGTQYQ--NFPE------INHAPLIADMSSDILSRP---LKVN----QFGMIYAGAQKNLG-PSGVTVVIVKK 210 (360)
T ss_dssp ES-EETTTTEECS--SCCC------CCSSCEEEECTTTTTSSC---CCGG----GCSEEEEETTTTTS-CTTCEEEEEEH
T ss_pred eC-CCCCcceecc--cccc------cCCceEEEechhhcCCCC---cCcc----cCCEEEEEcccccC-CCCcEEEEEcH
Confidence 65 5669999987 3433 799999999998765432 1221 23788889999998 456 8888888
Q ss_pred HHHHHHHHHHHh---------hCCCcc-hhHHHHHHHHHHHH---H--hHHHHhhhHHHHHHHHHHHHhcCCCc-eEec-
Q 018243 222 EFIKKARRLRKT---------LGGGMR-QVGVLCAAALVALQ---E--NVLVMLDGDHKKAKLLAEGLNQLKGL-RVDV- 284 (359)
Q Consensus 222 ~~~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~l~---~--~~~~~~~~~~~~~~~l~~~l~~~~g~-~~~~- 284 (359)
++++.++..... .+.... .+.....++..+++ . ..++.++++.++++++.+.|++++++ ....
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 290 (360)
T 1w23_A 211 DLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAE 290 (360)
T ss_dssp HHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSC
T ss_pred HHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCC
Confidence 877654322100 011111 12222222333332 2 34557778889999999999998655 5421
Q ss_pred CCccce-EEEEEeccchHHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 285 DAVETN-IVYFEITEDSKLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 285 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
+...++ ++++.++. ..+..++.++|.++||.+.++. .+++|++++..++++++++++++|++++++
T Consensus 291 ~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 291 KGSRSLMNVTFNLRN--EELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp GGGBCSSEEEEECSS--HHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred chhccCcEEEEEcCC--CccHHHHHHHHHHCCeeeecCCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 222334 88888865 2467789999999999997764 468999998888999999999999988764
No 204
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.96 E-value=2.5e-28 Score=216.56 Aligned_cols=327 Identities=12% Similarity=0.080 Sum_probs=210.6
Q ss_pred cccccCCCC----CChH--HHHHHHHHcCCCC--CCccCCChHHHHHHHHHHHHh-CCC------CeEEcCCchHHHHHH
Q 018243 5 TVDLRSDTV----TKPT--EAMRAAMASAEVD--DDVLMHDPTAFRLETEMAKVM-GKE------AGLFVPSGTMGNLIS 69 (359)
Q Consensus 5 ~id~~~~~~----~~~~--~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~-~~~------~~~~~~~gt~a~~~~ 69 (359)
.|||.-+.+ ..|. |.|++|....... ...|.+..+..++++++++++ |.. ..+.+.+||.|+..+
T Consensus 46 kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a 125 (420)
T 4h51_A 46 KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKIIYGNTVELENLVAVQTLSGTGAVSLG 125 (420)
T ss_dssp CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHC---CGGGEEEEEEEHHHHHHHHH
T ss_pred CEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHhcCCCccccccceeeecCchHHHHHH
Confidence 577776532 2222 7777776554322 345888899999999999975 322 125577888888777
Q ss_pred HHHhh---hhcCCeEEecCCCcceeeccccccccCCcccee-ee--cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEe
Q 018243 70 VLVHC---ETRGSEVILGDNSHIHIYENGGISTIGGVHPRT-VK--NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLE 143 (359)
Q Consensus 70 l~~~~---~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~-v~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~ 143 (359)
+..+. ..+||+|++++|+|.+ |. .+.+..|.+.+. ++ .+.++.+|.+.+.+.+++.. ++++++++
T Consensus 126 ~~~l~~~~~~pgd~V~ip~P~w~~-y~--~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~-----~~~~vll~- 196 (420)
T 4h51_A 126 AKLLTRVFDAETTPIYLSDPTWPN-HY--GVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAP-----DGSVFILH- 196 (420)
T ss_dssp HHHHTTTSCTTTSCEEEEESCCTH-HH--HHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSC-----SSCEEEEE-
T ss_pred HHHHHHhcCCCCCEEEEecCCchh-HH--HHHHHcCCeEEEeeccccccccCCCHHHHHHHHhccC-----CCcEEEEe-
Confidence 76654 2589999999999766 44 457778877543 32 23456678888888876421 45555555
Q ss_pred ccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch-----hHhhh-cCccEE-EEeccccCCCcee--
Q 018243 144 NTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP-----VRRLV-QAADSA-SVCLSKGLGAPVG-- 214 (359)
Q Consensus 144 ~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~-----~~~~~-~~~d~~-~~s~~K~~g~~~g-- 214 (359)
++++||||..++.+++++|.++|+++++++++|++|..... .+.. ..... ....++ +.|+||.|+.++.
T Consensus 197 ~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~Rv 274 (420)
T 4h51_A 197 QCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYAS--GSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERA 274 (420)
T ss_dssp SSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTT--SCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhcc--CCcccchHHHHhHHhhCceEEEEeccccccccccCce
Confidence 77888999999999999999999999999999999643222 2211 11111 122344 4599999987654
Q ss_pred eEEecCHHHHHH-------HHHHHHhhCCCcchhHHHHHHHHH---H----HHHhHHHHhhhHHHHHHHHHHHHhcCCCc
Q 018243 215 SVIVGSKEFIKK-------ARRLRKTLGGGMRQVGVLCAAALV---A----LQENVLVMLDGDHKKAKLLAEGLNQLKGL 280 (359)
Q Consensus 215 g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~---~----l~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 280 (359)
|++++.....+. +.........+.+..+...++... . ++..++..++++.++++.|.+.|+++ |.
T Consensus 275 G~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~-g~ 353 (420)
T 4h51_A 275 GTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRL-QT 353 (420)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred EEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CC
Confidence 776653222222 222222222222222222221111 1 12334456777888999999999987 42
Q ss_pred ----eEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 018243 281 ----RVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCEE 356 (359)
Q Consensus 281 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 356 (359)
.... +..|.|.|..++. +.++.|+++||++++++ ||++. +++++++++++++|.++++++.+|
T Consensus 354 ~~~~~~i~-~q~GmF~~~gls~-------e~v~~L~e~~Vy~~~~g----Ris~A-gl~~~ni~~~a~aI~~vvr~i~re 420 (420)
T 4h51_A 354 PGSWEHVI-NQIGMFSFLGLSK-------AQCEYCQNHNIFITVSG----RANMA-GLTHETALMLAQTINDAVRNVNRE 420 (420)
T ss_dssp SSCCTHHH-HCCSSEEECCCCH-------HHHHHHHHTTEECCTTC----EEEGG-GCCHHHHHHHHHHHHHHHC-----
T ss_pred CCCCCeec-CCCceEEecCcCH-------HHHHHHHhCCEEEcCCC----EEEec-cCCHHHHHHHHHHHHHHHHHhhcC
Confidence 2222 3467777765543 34577899999998876 99987 689999999999999999988654
No 205
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.96 E-value=3.7e-28 Score=219.79 Aligned_cols=337 Identities=13% Similarity=0.105 Sum_probs=218.3
Q ss_pred cccccccCC---CCC-ChHHHHHHHHHcCCCCCCc----cCCChHHHHHHHHHHHHhCC---CCeEEcCCchHHHHHHHH
Q 018243 3 TRTVDLRSD---TVT-KPTEAMRAAMASAEVDDDV----LMHDPTAFRLETEMAKVMGK---EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~---~~~-~~~~~~~~a~~~~~~~~~~----~~~~~~~~~l~~~la~~~~~---~~~~~~~~gt~a~~~~l~ 71 (359)
.++|||.++ ++. ..+|++.+++.+....... .+..+...++++.++++++. +..++++||++|+..++.
T Consensus 61 ~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk 140 (451)
T 3oks_A 61 NRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTHTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVK 140 (451)
T ss_dssp CEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTCSCCTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHH
T ss_pred CEEEEcCCCccccccCCCCHHHHHHHHHHHHhcccccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHH
Confidence 357899875 222 3358888888775433221 23456778999999999863 346899999999999998
Q ss_pred HhhhhcC-CeEEecCCCcceeeccccccccCC-------------ccceeeecCCCC-----CC--------CHHHHHHH
Q 018243 72 VHCETRG-SEVILGDNSHIHIYENGGISTIGG-------------VHPRTVKNNQDG-----TM--------DIDLIEAA 124 (359)
Q Consensus 72 ~~~~~~g-~~vl~~~~~~~~~~~~~~~~~~~g-------------~~~~~v~~~~~~-----~~--------~~~~l~~~ 124 (359)
.++..+| ++|++..++|..... + .....+ ..+..++.+..+ .+ +++.+++.
T Consensus 141 ~a~~~~g~~~ii~~~~~yhG~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 218 (451)
T 3oks_A 141 IARSHTHKPAVVAFDHAYHGRTN-L-TMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITV 218 (451)
T ss_dssp HHHHHHCCCEEEEETTCCCCSSH-H-HHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHH
T ss_pred HHHHhcCCCeEEEEcCCcCCccH-H-HHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHH
Confidence 8874344 678888887654332 1 111111 123334332110 01 24444454
Q ss_pred hcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc--hhHhhhcCccEEE
Q 018243 125 IRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV--PVRRLVQAADSAS 202 (359)
Q Consensus 125 l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~~d~~~ 202 (359)
+++.. ...++++|++++..++.+....+.+++++|+++|++||+++|+||+|... ...+. ....+....|++
T Consensus 219 l~~~~---~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~--g~~g~~~~~~~~~~~pdi~- 292 (451)
T 3oks_A 219 IDKQI---GADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGF--ARTGAMFACEHEGIDPDLI- 292 (451)
T ss_dssp HHHHT---CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTT--TTTSSSSGGGGGTCCCSEE-
T ss_pred HHhhc---CCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCC--CccccchhhhhcCCCCCee-
Confidence 44210 01467888887766543334556788999999999999999999997522 22222 122222245655
Q ss_pred EeccccCCCcee-eEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhc----
Q 018243 203 VCLSKGLGAPVG-SVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQ---- 276 (359)
Q Consensus 203 ~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~---- 276 (359)
+++|.++++.. |++++++++++.+... ..+.++..+++.++++..+++...+ +..++..++.+++++.|++
T Consensus 293 -t~sK~l~~G~~iG~v~~~~~~~~~~~~~--~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 369 (451)
T 3oks_A 293 -VTAKGIAGGLPLSAVTGRAEIMDSPHVS--GLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAE 369 (451)
T ss_dssp -EECGGGGTTSSCEEEEEEHHHHTCSCTT--SBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -eehhhhhCCcceEEEEECHHHHhhhcCC--CcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 67799965333 6788898888776432 2455566677778888877764332 2455556666666666554
Q ss_pred CCCceEecCCccceEEEEEecc-----chHHHHHHHHHHHHhcCceeccCCC--cEEEEEeCCCCCHHHHHHHHHHHHHH
Q 018243 277 LKGLRVDVDAVETNIVYFEITE-----DSKLYAACLLKKLEEHGVLVMPESS--TRVRIVVHHQISANDVHYTLSCFQKI 349 (359)
Q Consensus 277 ~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~gi~~~~~~~--~~lRi~~~~~~~~~~i~~~~~~l~~~ 349 (359)
.|.+... +..+.++++.+.. +......++.+.|.++||.+.+++. ..+|++++..++++++++++++|+++
T Consensus 370 ~~~~~~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~ 447 (451)
T 3oks_A 370 DDRIGDV--RGRGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGTYGNVVRFLPPLSIGDDLLNEGLDVLEEV 447 (451)
T ss_dssp CTTEEEE--EEETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCeEEE--EEeeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 4444432 3467788887732 2234678899999999999988765 78999999899999999999999998
Q ss_pred HHH
Q 018243 350 YAG 352 (359)
Q Consensus 350 ~~~ 352 (359)
+++
T Consensus 448 l~~ 450 (451)
T 3oks_A 448 LRG 450 (451)
T ss_dssp HHC
T ss_pred Hhh
Confidence 864
No 206
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.96 E-value=2.6e-27 Score=214.92 Aligned_cols=338 Identities=11% Similarity=0.039 Sum_probs=219.0
Q ss_pred cccccccCC---CCC-ChHHHHHHHHHcCCCCC----C-ccCCChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHH
Q 018243 3 TRTVDLRSD---TVT-KPTEAMRAAMASAEVDD----D-VLMHDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~---~~~-~~~~~~~~a~~~~~~~~----~-~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~ 71 (359)
.+++||.++ ++. ..+|++.+++.+..... . .....+...++++.++++++. +..++++||++|+..++.
T Consensus 50 ~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~ 129 (459)
T 4a6r_A 50 NKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIR 129 (459)
T ss_dssp CEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHH
T ss_pred CEEEECCCchhcccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHH
Confidence 357899886 222 33488888887643221 1 123467778999999999864 456888999999999999
Q ss_pred Hhhhh-------cCCeEEecCCCcceeeccccccccCCc------------cceeeecCC-----CCCCC--------HH
Q 018243 72 VHCET-------RGSEVILGDNSHIHIYENGGISTIGGV------------HPRTVKNNQ-----DGTMD--------ID 119 (359)
Q Consensus 72 ~~~~~-------~g~~vl~~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~-----~~~~~--------~~ 119 (359)
.++.. ++++|++.+++|..... + .....+. .+..++.+. ++ +| ++
T Consensus 130 ~~~~~~~~~g~~~~~~vi~~~~~yhg~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~ 206 (459)
T 4a6r_A 130 MVRRYWDVQGKPEKKTLIGRWNGYHGSTI-G-GASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAAR 206 (459)
T ss_dssp HHHHHHHHTTCTTCCEEEEETTCCCCSSH-H-HHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCEEEEECCCcCCccH-H-HHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHH
Confidence 98741 46789988888765432 1 1111111 122232211 11 34 78
Q ss_pred HHHHHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc--hhHhhhc
Q 018243 120 LIEAAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV--PVRRLVQ 196 (359)
Q Consensus 120 ~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~ 196 (359)
+|++.+++.. ..++++|+++++++ ++|. +++.+++++|+++|++||+++|+||+|... ...+. .......
T Consensus 207 ~le~~i~~~~----~~~~~~vi~ep~~~-~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~--gr~G~~~~~~~~~~ 279 (459)
T 4a6r_A 207 WLEEKILEIG----ADKVAAFVGEPIQG-AGGVIVPPATYWPEIERICRKYDVLLVADEVICGF--GRTGEWFGHQHFGF 279 (459)
T ss_dssp HHHHHHHHHC----GGGEEEEEECSSBT-TTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTT--TTTSSSSHHHHHTC
T ss_pred HHHHHHHHcC----CCCEEEEEECCccC-CCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCC--CcccccchHhhcCC
Confidence 8888886310 03577888866555 5555 558899999999999999999999997522 22231 1222223
Q ss_pred CccEEEEeccccCCCc-ee-eEEecCHHHHHHHHHHHH-hhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHH-HHHHHHH
Q 018243 197 AADSASVCLSKGLGAP-VG-SVIVGSKEFIKKARRLRK-TLGGGMRQVGVLCAAALVALQENVL-VMLDGDH-KKAKLLA 271 (359)
Q Consensus 197 ~~d~~~~s~~K~~g~~-~g-g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~-~~~~~l~ 271 (359)
..|++ +++|.++++ .. |++++++++++.+..... ..+.++..+++.++++..+++...+ ...++.. ++.++++
T Consensus 280 ~pdi~--t~sK~l~gg~~~lg~v~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~ 357 (459)
T 4a6r_A 280 QPDLF--TAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQ 357 (459)
T ss_dssp CCSEE--EECGGGGTTSSCCEEEEECHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHH
T ss_pred CCCee--ehhhhhcCCCCCccceeeCHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 45655 566988653 22 678889999888762211 1222333456677777777764322 2344444 4555555
Q ss_pred HHH----hcCCCceEecCCccceEEEEEeccch---------HHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHH
Q 018243 272 EGL----NQLKGLRVDVDAVETNIVYFEITEDS---------KLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISAND 338 (359)
Q Consensus 272 ~~l----~~~~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~ 338 (359)
+.| .+.|.+... +..+.++++.+..+. .....++.+.|.++||.+.+++ .++||+++...++++
T Consensus 358 ~~l~~~l~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~~~~~~t~e~ 434 (459)
T 4a6r_A 358 KRWRETFSRFEHVDDV--RGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACG-DHIVSAPPLVMTRAE 434 (459)
T ss_dssp HHHHHHHTTCTTEEEE--EEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEET-TEEEECCCTTCCHHH
T ss_pred HHHHHHHhcCCCeEEE--EEEEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecCC-CEEEEECCCCCCHHH
Confidence 554 445555443 346778777775421 1226788899999999998876 899999988999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 018243 339 VHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 339 i~~~~~~l~~~~~~~~~ 355 (359)
+++++++|+++++++..
T Consensus 435 i~~~l~~l~~~l~~~~~ 451 (459)
T 4a6r_A 435 VDEMLAVAERCLEEFEQ 451 (459)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999987753
No 207
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.96 E-value=4.9e-27 Score=208.31 Aligned_cols=282 Identities=22% Similarity=0.177 Sum_probs=208.3
Q ss_pred ChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cc-cccCCccceeeecCCCC
Q 018243 37 DPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GI-STIGGVHPRTVKNNQDG 114 (359)
Q Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~-~~~~g~~~~~v~~~~~~ 114 (359)
.|...++++.+++++|.+.+++++||++|+.. +..++ ++||+|+++++.|.+.+... .. ....|.+++.++.+
T Consensus 66 ~p~~~~l~~~la~l~g~~~~~~~~sG~~Ai~~-~~~l~-~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~--- 140 (400)
T 3nmy_A 66 NPTRFAYERCVAALEGGTRAFAFASGMAATST-VMELL-DAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLT--- 140 (400)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHH-HHTTS-CTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTT---
T ss_pred CHHHHHHHHHHHHHhCCCCEEEecCHHHHHHH-HHHHc-CCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCC---
Confidence 67789999999999999988999999888887 55555 69999999999998766511 11 23358888888765
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh
Q 018243 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL 194 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 194 (359)
|++++++.++ +++++|+++++. ||||.+.+ +++|+++|++||+++|+|++|+.+.. . .++
T Consensus 141 --d~~~l~~~i~--------~~~~~v~~e~~~-np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~---~---~~~ 200 (400)
T 3nmy_A 141 --DPAAFKAAIR--------ADTKMVWIETPT-NPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPML---Q---RPL 200 (400)
T ss_dssp --SHHHHHHHCC--------TTEEEEEEESSC-TTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHH---C---CGG
T ss_pred --CHHHHHHHhc--------cCCCEEEEECCC-CCCCeeec---HHHHHHHHHHcCCEEEEECCCccccc---C---Chh
Confidence 8999999998 789999997655 59999987 89999999999999999999743221 1 122
Q ss_pred hcCccEEEEeccccCCCc---eee--EEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHH
Q 018243 195 VQAADSASVCLSKGLGAP---VGS--VIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKL 269 (359)
Q Consensus 195 ~~~~d~~~~s~~K~~g~~---~gg--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 269 (359)
..++|+++.|++|+++++ .|| ++..++++.+.++......+.+. ++..++++...++.... ++++..+++..
T Consensus 201 ~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~--~~~~a~~~l~~l~~l~~-r~~~~~~~a~~ 277 (400)
T 3nmy_A 201 SLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQ--GPFDSFLALRGLKTLPL-RMRAHCENALA 277 (400)
T ss_dssp GGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBC--CHHHHHHHHHHHTTHHH-HHHHHHHHHHH
T ss_pred hcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCC--CHHHHHHHHHhHhHHHH-HHHHHHHHHHH
Confidence 237899999999999865 456 45568888888887777776655 45556666666665444 77888899999
Q ss_pred HHHHHhcCCCceE-ecC---------------CccceEEEEEeccchHHHHHHHHHHHHhcCceeccC------------
Q 018243 270 LAEGLNQLKGLRV-DVD---------------AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE------------ 321 (359)
Q Consensus 270 l~~~l~~~~g~~~-~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~------------ 321 (359)
+.+.|++.|.+.. ..+ ...+.++++.++. .......|.+.|+-.++.+..+
T Consensus 278 l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~-~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~ 356 (400)
T 3nmy_A 278 LAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKG-GFDAAKRFCEKTELFTLAESLGGVESLVNHPAVM 356 (400)
T ss_dssp HHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT-HHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTT
T ss_pred HHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCC-cHHHHHHHHHcCCcceEecCCCCCcceeeCcccc
Confidence 9999999887753 222 2246788999975 2234667777775444333211
Q ss_pred ---------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018243 322 ---------------SSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 322 ---------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.+..+|+++.. |+.+++++.|+++++
T Consensus 357 ~~~~~~~~~~~~~gi~~~liRlsvGl----e~~~dli~dl~~al~ 397 (400)
T 3nmy_A 357 THASIPVARREQLGISDALVRLSVGI----EDLGDLRGDLERALV 397 (400)
T ss_dssp TTTTSCHHHHHHHTCCTTEEEEECCS----SCHHHHHHHHHHHHC
T ss_pred ccccCCHHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHHh
Confidence 24579999953 466667777777665
No 208
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.96 E-value=3.7e-27 Score=211.25 Aligned_cols=308 Identities=16% Similarity=0.121 Sum_probs=213.0
Q ss_pred cCCCCCChHHHHHHHHHcCCCCCCccC--CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCC
Q 018243 9 RSDTVTKPTEAMRAAMASAEVDDDVLM--HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDN 86 (359)
Q Consensus 9 ~~~~~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~ 86 (359)
.++++..+..+....+.........|+ ..+...++++.+++++|.+.++++++|++|+..++..++ ++|++|+++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~v~~~sGt~A~~~~l~~~~-~~gd~vi~~~~ 105 (421)
T 2ctz_A 27 PTTSYVFKSPEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALEGGKAALATASGHAAQFLALTTLA-QAGDNIVSTPN 105 (421)
T ss_dssp CCSCBCCSCHHHHHHHHTTTTGGGSCBTTBCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHC-CTTCEEEECSC
T ss_pred ccceeeeCCHHHHHHhhccccCCCcccCCCChHHHHHHHHHHHHhCCCceEEecCHHHHHHHHHHHHh-CCCCEEEEeCC
Confidence 344555555333333222222233344 356789999999999999888999999999999999887 59999999999
Q ss_pred Ccceeeccccc---cccCCccceee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHH
Q 018243 87 SHIHIYENGGI---STIGGVHPRTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSV 162 (359)
Q Consensus 87 ~~~~~~~~~~~---~~~~g~~~~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i 162 (359)
+|.+... .. ....|++++.+ +.+ |++++++.++ +++++|+++++. ||||.+.| +++|
T Consensus 106 ~~~~~~~--~~~~~~~~~g~~~~~~~~~~-----d~~~l~~~i~--------~~~~~v~~~~~~-n~~G~~~~---l~~i 166 (421)
T 2ctz_A 106 LYGGTFN--QFKVTLKRLGIEVRFTSREE-----RPEEFLALTD--------EKTRAWWVESIG-NPALNIPD---LEAL 166 (421)
T ss_dssp CCHHHHH--HHHTHHHHTTCEEEECCTTC-----CHHHHHHHCC--------TTEEEEEEESSC-TTTCCCCC---HHHH
T ss_pred CchHHHH--HHHHHHHHcCCEEEEECCCC-----CHHHHHHhhc--------cCCeEEEEECCC-CCCCcccC---HHHH
Confidence 9988765 22 35678888888 654 8999999998 789999996655 59999988 8999
Q ss_pred HHHHHHcCcEEEEeccc-ccchhhhcCchhHhhhcCccEEEEeccccCCCce---eeEEecC--HHH----HHHHH----
Q 018243 163 GEIAKKHGLKLHIDGAR-IFNAAVALGVPVRRLVQAADSASVCLSKGLGAPV---GSVIVGS--KEF----IKKAR---- 228 (359)
Q Consensus 163 ~~~~~~~~~~li~D~a~-~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~---gg~~~~~--~~~----~~~~~---- 228 (359)
.++|+++|+++|+|++| +++. .+.. +..++|+++.|+||++++|. ||+++.+ +++ .+.+.
T Consensus 167 ~~~a~~~g~~livD~~~~~~g~---~~~~---~~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~ 240 (421)
T 2ctz_A 167 AQAAREKGVALIVDNTFGMGGY---LLRP---LAWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQP 240 (421)
T ss_dssp HHHHHHHTCEEEEECGGGGGGT---SCCG---GGGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBG
T ss_pred HHHHHHcCCEEEEECCcccccc---cCCc---cccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccc
Confidence 99999999999999998 6552 1222 22368999999999998743 5666652 111 11111
Q ss_pred ------------------HH----HHhhCCCcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEec-C
Q 018243 229 ------------------RL----RKTLGGGMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDV-D 285 (359)
Q Consensus 229 ------------------~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~-~ 285 (359)
.. ...++. ...+..++++..+++.... +.++..++++++.+.|++.|++.... +
T Consensus 241 g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~--~~~~~~a~~~~~~l~~l~~-r~~~~~~~a~~l~~~L~~~p~v~~v~~p 317 (421)
T 2ctz_A 241 GYHGLRLTEAFGELAFIVKARVDGLRDQGQ--ALGPFEAWVVLLGMETLSL-RAERHVENTLHLAHWLLEQPQVAWVNYP 317 (421)
T ss_dssp GGTTBCHHHHHGGGHHHHHHHHTHHHHHCC--CCCHHHHHHHHHHHTTHHH-HHHHHHHHHHHHHHHHHTCTTEEEEECT
T ss_pred hhhhhhhhhhcchhHHHHHHHHHHHHhcCC--CCCHHHHHHHHcCcchHHH-HHHHHHHhHHHHHHHHHhCCCeeEEECC
Confidence 00 111232 2345555566666665444 66677789999999999998987642 2
Q ss_pred ----------------CccceEEEEEeccchHHHHHHHHHHHHhcCceeccC---------------------------C
Q 018243 286 ----------------AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPE---------------------------S 322 (359)
Q Consensus 286 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~---------------------------~ 322 (359)
...+.++.|.+.. .......+.+.|...++.+..+ .
T Consensus 318 ~~~~~~~~~~~~~~~~~~~g~ivsf~l~~-~~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~ 396 (421)
T 2ctz_A 318 GLPHHPHHDRAQKYFKGKPGAVLTFGLKG-GYEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVS 396 (421)
T ss_dssp TSTTCTTHHHHHHHHTTCCCSEEEEEETT-HHHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCC
T ss_pred CCCCCCCHHHHHHhccCCCceEEEEEeCC-CHHHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCC
Confidence 2356778888875 1234556666665444433211 1
Q ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 323 STRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 323 ~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
++.+|++++ .++++++++.|++++
T Consensus 397 ~~~vRlS~g----~e~~~~li~~l~~al 420 (421)
T 2ctz_A 397 PEMVRLSVG----LEHVEDLKAELKEAL 420 (421)
T ss_dssp TTEEEEECC----SSCHHHHHHHHHHHT
T ss_pred CCeEEEEeC----CCCHHHHHHHHHHHh
Confidence 468999985 358888888888765
No 209
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.96 E-value=2.7e-27 Score=211.09 Aligned_cols=315 Identities=10% Similarity=0.089 Sum_probs=209.0
Q ss_pred ccccccCCCCCChHHHHHHHHHcC---CCCCCccCC--ChHHHHHHHHHHHHhCCCC--e-EE-cCCchHHHHHHHHHhh
Q 018243 4 RTVDLRSDTVTKPTEAMRAAMASA---EVDDDVLMH--DPTAFRLETEMAKVMGKEA--G-LF-VPSGTMGNLISVLVHC 74 (359)
Q Consensus 4 ~~id~~~~~~~~~~~~~~~a~~~~---~~~~~~~~~--~~~~~~l~~~la~~~~~~~--~-~~-~~~gt~a~~~~l~~~~ 74 (359)
..++|..+ +..+++.+++++.+. ..+...+.. .+...++++.+++++|.+. . ++ ++||++++..++.+++
T Consensus 40 ~~~~~~~~-~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~ 118 (398)
T 2fyf_A 40 RDGRFGSG-PSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLI 118 (398)
T ss_dssp SSCBCCSS-SCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTC
T ss_pred CCccccCC-CCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhc
Confidence 34566554 345568899999873 211111111 2346789999999999863 3 55 7888999999999887
Q ss_pred hhcCCeEEecCCCcceeeccccccccC--CccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018243 75 ETRGSEVILGDNSHIHIYENGGISTIG--GVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 75 ~~~g~~vl~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
++| .+++..+.|..... ..+... |.+++.++.+.+...+. .++ +++++|++++ ++||||.
T Consensus 119 -~~g-v~~v~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~g~~~~~-----~i~--------~~~~~v~~~~-~~nptG~ 180 (398)
T 2fyf_A 119 -DKR-SLHLTYGEFSAKFA--SAVSKNPFVGEPIIITSDPGSAPEP-----QTD--------PSVDVIAWAH-NETSTGV 180 (398)
T ss_dssp -SSC-EEEEECSHHHHHHH--HHHHHCTTSCCCEEEECCTTCCCCC-----CCC--------TTCSEEEEES-EETTTTE
T ss_pred -CCC-eEEEeCCHHHHHHH--HHHHHhCCCCceEEEecCCCCCCCc-----ccc--------CCCCEEEEeC-cCCCcce
Confidence 465 23344444422111 123333 77888887663222222 133 6789999865 5669999
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHHHH
Q 018243 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARRLR 231 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~~~ 231 (359)
++|.+++.++ +|+++|+|++|+.+... .. + ...|+++.|+||++|++.| |+++.++++++.++...
T Consensus 181 ~~~~~~i~~~------~~~~vivD~a~~~~~~~---~~---~-~~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~~ 247 (398)
T 2fyf_A 181 AVAVRRPEGS------DDALVVIDATSGAGGLP---VD---I-AETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIA 247 (398)
T ss_dssp ECCCCCCTTC------C-CEEEEECTTTTTTSC---CC---G-GGCSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHHH
T ss_pred ecchHHhhhh------cCCeEEEEeccccCCcc---cC---c-ccCcEEEEecCcccCCCCceEEEEECHHHHHHhhccc
Confidence 9997776665 89999999998665432 11 2 1478999999999998755 88889999888765432
Q ss_pred H-------hh-----------CCCcc-hhHHHHHHHHHHHH---Hh--HHHHhhhHHHHHHHHHHHHhcCCCceEec-CC
Q 018243 232 K-------TL-----------GGGMR-QVGVLCAAALVALQ---EN--VLVMLDGDHKKAKLLAEGLNQLKGLRVDV-DA 286 (359)
Q Consensus 232 ~-------~~-----------~~~~~-~~~~~~~~~~~~l~---~~--~~~~~~~~~~~~~~l~~~l~~~~g~~~~~-~~ 286 (359)
. .. +.... .+.....++..+++ +. .+...++..++++++.+.|+++||+++.. .+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 327 (398)
T 2fyf_A 248 ATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDP 327 (398)
T ss_dssp HTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSG
T ss_pred ccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCCh
Confidence 1 00 11111 12222223333332 22 45567788889999999999988888753 12
Q ss_pred -ccce-EEEEEeccchHHHHHHHHHHHHhcCceeccC----CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 287 -VETN-IVYFEITEDSKLYAACLLKKLEEHGVLVMPE----SSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 287 -~~~~-~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
..++ ++++.++. +.+..++.+.|.++||.+.++ +..++|++++..++++++++++++|++++++
T Consensus 328 ~~~~~~~~~~~~~~--~~~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 328 GLRSQVVGTIDFVD--DVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp GGBCSSEEEEEECT--TSCHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred hhcCCcEEEEECCC--CCCHHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 2345 88888864 246789999998889999764 2468999998888999999999999988764
No 210
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.96 E-value=4.1e-27 Score=208.40 Aligned_cols=277 Identities=16% Similarity=0.069 Sum_probs=201.8
Q ss_pred HHHHHHHHHcCCCCC------CccCC-ChHHHHHHHHHHHHhCCCCeEE---cCCchHHHHHHHHHhhhhcCCeEEecC-
Q 018243 17 TEAMRAAMASAEVDD------DVLMH-DPTAFRLETEMAKVMGKEAGLF---VPSGTMGNLISVLVHCETRGSEVILGD- 85 (359)
Q Consensus 17 ~~~~~~a~~~~~~~~------~~~~~-~~~~~~l~~~la~~~~~~~~~~---~~~gt~a~~~~l~~~~~~~g~~vl~~~- 85 (359)
+.+++++|.+..... ..|.+ .+....+++.+++++|.+.+++ ++||++|+..++.+++ ++||+|++++
T Consensus 31 ~~~vl~a~~~~~~~~~~~~~~~~~~y~~~~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all-~~GD~Vl~~~~ 109 (409)
T 3jzl_A 31 QAKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGIL-RPDDELLYITG 109 (409)
T ss_dssp HHHHHHHHHHTTCCGGGGCCCCTTCTTCHHHHHHHHHHHHHHTCSEEEEETTSCSHHHHHHHHHHHHC-CTTCEEEECSS
T ss_pred HHHHHHHHHHhhhhhhccCCCcCCCCChhHHHHHHHHHHHHhCCCcEEEECCCccHHHHHHHHHHHhc-CCCCEEEEeCC
Confidence 467888887754321 12332 3567899999999999998877 8999999999999988 5999999998
Q ss_pred CCcceeeccc-------cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEecc---ccCCCceecC
Q 018243 86 NSHIHIYENG-------GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENT---HANCGGRCLS 155 (359)
Q Consensus 86 ~~~~~~~~~~-------~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~---~~~ptG~~~~ 155 (359)
+.|....... ...+..|++++.++.++++.+|++++++.++ +++++|+++++ ++||||.+.
T Consensus 110 ~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~--------~~tklV~i~~s~g~p~nptg~v~- 180 (409)
T 3jzl_A 110 QPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMT--------PKTKMIGIQRSRGYADRPSFTIE- 180 (409)
T ss_dssp SCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCC--------TTEEEEEEECSCTTSSSCCCCHH-
T ss_pred CCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhcc--------CCCeEEEEECCCCCCCCCcCccc-
Confidence 8876654200 1255678899999887888899999999998 78999999773 455888764
Q ss_pred hhhHHHHHHHHHH--cCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCC---ceeeEEecCHHHHHHHHHH
Q 018243 156 VEYTDSVGEIAKK--HGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGA---PVGSVIVGSKEFIKKARRL 230 (359)
Q Consensus 156 ~~~l~~i~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~---~~gg~~~~~~~~~~~~~~~ 230 (359)
++++|+++|++ +|+++|+|++|+.+... .. +...++|+++.|+||++|+ +.||+++++++++++++..
T Consensus 181 --~l~~I~~la~~~~~~~~livD~a~~~~~~~---~~--p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~ 253 (409)
T 3jzl_A 181 --KIKEMIVFVKNINPEVIVFVDNCYGEFVEY---QE--PPEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYR 253 (409)
T ss_dssp --HHHHHHHHHHHHCTTCEEEEECTTCTTTSS---CC--SGGGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHH
T ss_pred --cHHHHHHHHHhhCCCCEEEEeCCccccccc---CC--ccccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHH
Confidence 58999999999 99999999996543321 11 1223789999999999976 4579999999999998764
Q ss_pred HHhhCC--CcchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccce-----EEEEEeccchHHH
Q 018243 231 RKTLGG--GMRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETN-----IVYFEITEDSKLY 303 (359)
Q Consensus 231 ~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~ 303 (359)
....+. ..........++..+++.... ++++..+++.++++.|+++ |+++. +. .+. ++.+.+.+ ...
T Consensus 254 ~~~~~~g~~~g~~~~~~~~~l~gl~~~~~-r~~~~~~~a~~la~~L~~~-g~~v~-p~-~~~~~~~~i~~i~l~~--~~~ 327 (409)
T 3jzl_A 254 LTTPGIGREAGASLYSLLEMYQGFFLAPH-VTAQAIKGARFTAAMLAEF-GVEAD-PV-WDAPRTDLIQSVSFHN--KEK 327 (409)
T ss_dssp HSCTTTGGGCCCCTTCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHT-TCEEE-SC-TTSCCSSSCCEEECSC--HHH
T ss_pred hccccccccccccHHHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHhC-CCccc-CC-CCCCCccEEEEEEeCC--HHH
Confidence 432111 111111112334455554433 7788889999999999999 88873 32 333 67777764 357
Q ss_pred HHHHHHHHHhcCc
Q 018243 304 AACLLKKLEEHGV 316 (359)
Q Consensus 304 ~~~~~~~l~~~gi 316 (359)
..+|++.|+....
T Consensus 328 ~~~~~~~L~~~~~ 340 (409)
T 3jzl_A 328 MVAFAQAIQAASP 340 (409)
T ss_dssp HHHHHHHHHHTSS
T ss_pred HHHHHHHHHhcCc
Confidence 7889999977654
No 211
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.96 E-value=1.2e-26 Score=210.35 Aligned_cols=329 Identities=16% Similarity=0.122 Sum_probs=208.1
Q ss_pred ccccccCC---CCC-ChHHHHHHHHHcCCCCCCccC-CChHHHHHHHHHHHHh-CCCCeEEcCCchHHHHHHHHHhh-hh
Q 018243 4 RTVDLRSD---TVT-KPTEAMRAAMASAEVDDDVLM-HDPTAFRLETEMAKVM-GKEAGLFVPSGTMGNLISVLVHC-ET 76 (359)
Q Consensus 4 ~~id~~~~---~~~-~~~~~~~~a~~~~~~~~~~~~-~~~~~~~l~~~la~~~-~~~~~~~~~~gt~a~~~~l~~~~-~~ 76 (359)
.+|||.++ ++. .++|.+.+++.+.......++ ..+...++.+.+++.+ +.+..++++||++|+..++..+. ..
T Consensus 58 ~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~gg~eA~~~al~~ar~~~ 137 (453)
T 2cy8_A 58 VYLDFFGGHGALVLGHGHPRVNAAIAEALSHGVQYAASHPLEVRWAERIVAAFPSIRKLRFTGSGTETTLLALRVARAFT 137 (453)
T ss_dssp EEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTCSSCSSCHHHHHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHHHH
T ss_pred EEEECcccHhhcccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHHHHHHhh
Confidence 46899877 333 356889998887554322222 3445566666666666 45556899999999999998842 12
Q ss_pred cCCeEEecCCCcceeeccccccc----------cCCc------cceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEE
Q 018243 77 RGSEVILGDNSHIHIYENGGIST----------IGGV------HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLI 140 (359)
Q Consensus 77 ~g~~vl~~~~~~~~~~~~~~~~~----------~~g~------~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v 140 (359)
.+++|++.+++|..... + ... ..|. .++.++. .|+++|++.+++.. +++++|
T Consensus 138 ~~~~vi~~~~~yhg~~~-~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~-----~~~~~v 205 (453)
T 2cy8_A 138 GRRMILRFEGHYHGWHD-F-SASGYNSHFDGQPAPGVLPETTANTLLIRP-----DDIEGMREVFANHG-----SDIAAF 205 (453)
T ss_dssp CCCEEEEECC------------------------------CGGGEEEECT-----TCHHHHHHHHHHHG-----GGEEEE
T ss_pred CCCEEEEEcCCcCCCch-h-hHhhcCCccCCCcCCCCCccccCceeecCC-----CCHHHHHHHHHhcC-----CCEEEE
Confidence 45678888887664432 1 111 1132 1223332 28999999987310 367888
Q ss_pred EEeccccCCCceec-ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEeccccCCCce-eeE
Q 018243 141 CLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSKGLGAPV-GSV 216 (359)
Q Consensus 141 ~i~~~~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~g~~~-gg~ 216 (359)
++++.+ ++||... +.+++++|+++|++||+++|+||+|. +.. .+.. ...+....|++ |++|+++++. .|+
T Consensus 206 i~ep~~-~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~--~g~~~~~~~~~~~~di~--s~sK~l~~G~~~G~ 279 (453)
T 2cy8_A 206 IAEPVG-SHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GFR--VGNHGMQALLDVQPDLT--CLAKASAGGLPGGI 279 (453)
T ss_dssp EECSSE-HHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTT--TCTTHHHHHHTCCCSEE--EEEGGGGTTSSCEE
T ss_pred EECCCC-CCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-ccc--cCchhhhHHhCCCCcEE--EEChhhhCCcceEE
Confidence 886654 4799754 68999999999999999999999986 332 2221 11222245654 7779997532 378
Q ss_pred EecCHHHHHHHHH---HHHhhCCCcchhHHHHHHHHHHHHH-hHHHHhhhHHHHHHHHHHHHhcCC---CceEecCCccc
Q 018243 217 IVGSKEFIKKARR---LRKTLGGGMRQVGVLCAAALVALQE-NVLVMLDGDHKKAKLLAEGLNQLK---GLRVDVDAVET 289 (359)
Q Consensus 217 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~l~~~~---g~~~~~~~~~~ 289 (359)
+++++++++.+.. .....+.++..+++.++++..+++. ..++..++..++.+++++.|+++. ++.... +..+
T Consensus 280 v~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g 358 (453)
T 2cy8_A 280 LGGREDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTILEDDVCAKINDLGQFAREAMNHLFARKGLNWLA-YGRF 358 (453)
T ss_dssp EEECHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE-ECCT
T ss_pred EechHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCcEEE-EEee
Confidence 8889888876543 1112333444566667777777765 422355667777888888876641 332212 3467
Q ss_pred eEEEEEecc-----c------------hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 290 NIVYFEITE-----D------------SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 290 ~~~~~~~~~-----~------------~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.++|+.++. . ......++.+.|.++||.+.+.+ .+|+ +..++++++++++++|++++++
T Consensus 359 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~~~--~~~l--~~~~t~~~i~~~l~~l~~~l~~ 434 (453)
T 2cy8_A 359 SGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGGRG--SVFL--SAQHEREHVEHLVTTFDRVLDR 434 (453)
T ss_dssp TEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECBTTT--EEEC--CTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEeCCC--CEEe--eccCCHHHHHHHHHHHHHHHHH
Confidence 788988864 1 12346789999988999996653 3555 4589999999999999999988
Q ss_pred HHh
Q 018243 353 VCE 355 (359)
Q Consensus 353 ~~~ 355 (359)
+.+
T Consensus 435 ~~~ 437 (453)
T 2cy8_A 435 LAD 437 (453)
T ss_dssp HHH
T ss_pred HHh
Confidence 754
No 212
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.96 E-value=2.6e-27 Score=222.54 Aligned_cols=313 Identities=13% Similarity=0.100 Sum_probs=211.5
Q ss_pred ccCCChHHHHHHHHHHHHhCCCCeEEcCCch-HHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC
Q 018243 33 VLMHDPTAFRLETEMAKVMGKEAGLFVPSGT-MGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN 111 (359)
Q Consensus 33 ~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt-~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 111 (359)
.++..+...++++.+++++|.+..+++++|+ +++..++.+++ ++||+|++++++|.+.+. +.+.+.|++++.++..
T Consensus 168 l~~~~~~i~e~e~~lA~~~gae~~i~v~nGtt~an~~ai~al~-~pGD~VLv~~~~H~S~~~--~~~~l~Ga~~v~v~~~ 244 (730)
T 1c4k_A 168 LLIHEGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALV-SNGDLVLFDRNNHKSVYN--SALAMAGGRPVYLQTN 244 (730)
T ss_dssp TTTTBTHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHC-CTTCEEEEETTCCHHHHH--HHTTTTCCEEEEECEE
T ss_pred ccCChHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhc-CCCCEEEEcCCchHHHHH--HHHHHCCCEEEEEeCC
Confidence 4455567899999999999999888888886 77888888887 599999999999999886 3256788888887543
Q ss_pred C-C----CCCCHHHH-----HHHhcCC-CCCccCCce-eEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEeccc
Q 018243 112 Q-D----GTMDIDLI-----EAAIRDP-KGEIVYPTT-RLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGAR 179 (359)
Q Consensus 112 ~-~----~~~~~~~l-----~~~l~~~-~~~~~~~~~-~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~ 179 (359)
. + +.+|+++| ++++++. ++..+...+ ++|+++++ + |+|.+.+ +++|.++|+++|+++|+|++|
T Consensus 245 ~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n-~~G~v~d---l~~I~~la~~~g~~livDeAh 319 (730)
T 1c4k_A 245 RNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-T-YDGTIYN---AHEVVKRIGHLCDYIEFDSAW 319 (730)
T ss_dssp ECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-C-TTSEEEC---HHHHHHHHGGGBSEEEEECTT
T ss_pred ccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-C-CCCeecC---HHHHHHHHHHcCCeEEEEccc
Confidence 2 2 33688888 8888741 000000112 78888664 3 8999987 899999999999999999998
Q ss_pred ccchhhhcCch-hHhhh---cCcc----EEEEeccccCCCcee-eEEec-CHHH--------HHHHHHHHHhhCCCcchh
Q 018243 180 IFNAAVALGVP-VRRLV---QAAD----SASVCLSKGLGAPVG-SVIVG-SKEF--------IKKARRLRKTLGGGMRQV 241 (359)
Q Consensus 180 ~~~~~~~~~~~-~~~~~---~~~d----~~~~s~~K~~g~~~g-g~~~~-~~~~--------~~~~~~~~~~~~~~~~~~ 241 (359)
+.+........ ...+. .++| +++.|+||+++++.+ |+++. ++.+ ...++........+. ++
T Consensus 320 ~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~sts-p~ 398 (730)
T 1c4k_A 320 VGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTS-PF 398 (730)
T ss_dssp CCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSS-CC
T ss_pred ccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCC-Cc
Confidence 54322111000 11121 1456 778899999987654 66643 2221 122222222222222 23
Q ss_pred HHHHHHHHHHHH---H-hHHHHhhhHHHHHHHHHHHHhc-CCCceEecCCc-----------------------------
Q 018243 242 GVLCAAALVALQ---E-NVLVMLDGDHKKAKLLAEGLNQ-LKGLRVDVDAV----------------------------- 287 (359)
Q Consensus 242 ~~~~~~~~~~l~---~-~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~----------------------------- 287 (359)
....++...+++ . ...+++++..++++++++.|++ ++|+++..+..
T Consensus 399 ~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (730)
T 1c4k_A 399 YPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKW 478 (730)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTT
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchh
Confidence 333333333332 2 2233677888999999999998 67888743311
Q ss_pred -------cc-e-E----EEEEecc---------chHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHH
Q 018243 288 -------ET-N-I----VYFEITE---------DSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSC 345 (359)
Q Consensus 288 -------~~-~-~----~~~~~~~---------~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~ 345 (359)
.+ . + +.+..+. ..+.++..+.+.|+++||.+...+...+|++++.++++++++.++++
T Consensus 479 ~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~~~~~ir~~~s~g~t~e~i~~Ll~a 558 (730)
T 1c4k_A 479 HAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSDLNSILFLMTPAETPAKMNNLITQ 558 (730)
T ss_dssp TCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEECSSEEEEECCTTCCHHHHHHHHHH
T ss_pred ccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEECCCCeEEEEeCCCCCHHHHHHHHHH
Confidence 11 1 1 4455531 12357889999998889999877788999999999999999999999
Q ss_pred HHHHHHHHH
Q 018243 346 FQKIYAGVC 354 (359)
Q Consensus 346 l~~~~~~~~ 354 (359)
|.++.+.+.
T Consensus 559 L~~i~~~~~ 567 (730)
T 1c4k_A 559 LLQLQRLIE 567 (730)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhcc
Confidence 999987664
No 213
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.96 E-value=3.2e-26 Score=203.26 Aligned_cols=279 Identities=16% Similarity=0.106 Sum_probs=202.9
Q ss_pred HHHHHHHHHcCCCC------CCccCC-ChHHHHHHHHHHHHhCCCCeEE---cCCchHHHHHHHHHhhhhcCCeEEecC-
Q 018243 17 TEAMRAAMASAEVD------DDVLMH-DPTAFRLETEMAKVMGKEAGLF---VPSGTMGNLISVLVHCETRGSEVILGD- 85 (359)
Q Consensus 17 ~~~~~~a~~~~~~~------~~~~~~-~~~~~~l~~~la~~~~~~~~~~---~~~gt~a~~~~l~~~~~~~g~~vl~~~- 85 (359)
.+++++++.+.... ...|.+ .+....+++.+++++|.+.+++ ++||++|+..++.+++ ++||+|++++
T Consensus 45 ~~~Vl~A~~~~~~~~~~~~~~~gy~y~~~~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all-~pGD~Vl~~~~ 123 (427)
T 3i16_A 45 QLKVLNAFQEERISEAHFTNSSGYGYGDIGRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNL-RPGNTMLSVCG 123 (427)
T ss_dssp HHHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHHC-CTTCEEEESSS
T ss_pred HHHHHHHHHHhchhHHhcCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeCCCccHHHHHHHHHHHHh-CCCCEEEEeCC
Confidence 36788888764322 122332 4567899999999999998887 8999999999999988 5999999998
Q ss_pred CCcceeeccc--------cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEecc---ccCCCceec
Q 018243 86 NSHIHIYENG--------GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENT---HANCGGRCL 154 (359)
Q Consensus 86 ~~~~~~~~~~--------~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~---~~~ptG~~~ 154 (359)
+.|....... ......|++++.++.++++.+|++++++.+++. +++++|+++++ ++||||.+
T Consensus 124 ~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~------~~tklV~i~~s~~~p~nptg~i- 196 (427)
T 3i16_A 124 EPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKED------ESITLVHIQRSTGYGWRRALLI- 196 (427)
T ss_dssp SCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTC------TTEEEEEEECSCCSSSSCCCCH-
T ss_pred CccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCC------CCCEEEEEEcCCCCCCCCcccH-
Confidence 8876654100 225567889999988788889999999999842 47899999774 34477765
Q ss_pred ChhhHHHHHHHHHH--cCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCC---ceeeEEecCHHHHHHHHH
Q 018243 155 SVEYTDSVGEIAKK--HGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGA---PVGSVIVGSKEFIKKARR 229 (359)
Q Consensus 155 ~~~~l~~i~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~---~~gg~~~~~~~~~~~~~~ 229 (359)
.++++|+++|++ +|+++|+|++|+.+... . .+...++|+++.|+||++|+ +.||+++++++++++++.
T Consensus 197 --~dl~~i~~la~~~~~g~~livD~a~~~~~~~--~---~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~ 269 (427)
T 3i16_A 197 --EDIKSIVDCVKNIRKDIICFVDNCYGEFMDT--K---EPTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSY 269 (427)
T ss_dssp --HHHHHHHHHHHHHCTTSEEEEECTTTTTSSS--S---CGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHH
T ss_pred --HHHHHHHHHHHHhCCCCEEEEECCCcccccc--C---CccccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHH
Confidence 569999999999 99999999997543321 1 12223789999999999987 677999999999999876
Q ss_pred HHHhhCCCcchhH-HH-HHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccce-----EEEEEeccchHH
Q 018243 230 LRKTLGGGMRQVG-VL-CAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETN-----IVYFEITEDSKL 302 (359)
Q Consensus 230 ~~~~~~~~~~~~~-~~-~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~ 302 (359)
.....+.+....+ .. +..+...++... .++++..+++.++++.|+++ ++++. +. .+. ++.+.+.. ..
T Consensus 270 ~~~~~~~g~~~~~~~~~a~~~l~gl~~~~-~r~~~~~~~a~~la~~L~~~-g~~V~-p~-~~~~~~~~i~~i~l~~--~~ 343 (427)
T 3i16_A 270 RLTVPGIGGECGSTFGVVRSMYQGLFLAP-HISMEALKGAILCSRIMELA-GFEVM-PK-YDEKRSDIIQSIKFND--KD 343 (427)
T ss_dssp HHSCTTTGGGCCCCTTCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHT-TCEEE-SC-TTSCCSSSCEEEECSS--HH
T ss_pred hcccCccCccCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhC-CCeec-CC-CCCCCccEEEEEEECC--HH
Confidence 4332222111111 11 333444454443 37888999999999999999 77773 32 444 77788864 24
Q ss_pred HHHHHHHHHHhcCc
Q 018243 303 YAACLLKKLEEHGV 316 (359)
Q Consensus 303 ~~~~~~~~l~~~gi 316 (359)
...+|++.|+....
T Consensus 344 ~~~~f~~~l~~~~~ 357 (427)
T 3i16_A 344 KLIEFCKGIQTGSP 357 (427)
T ss_dssp HHHHHHHHHHHTCS
T ss_pred HHHHHHHHHhhcCc
Confidence 77889999977643
No 214
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.96 E-value=1.7e-27 Score=211.50 Aligned_cols=309 Identities=14% Similarity=0.021 Sum_probs=206.4
Q ss_pred ccccccCCCCCChH-HHHHHHHHcCC--C---CCCccCCChHH-----HHHHHHHHHHhCC------C-CeE-EcCCchH
Q 018243 4 RTVDLRSDTVTKPT-EAMRAAMASAE--V---DDDVLMHDPTA-----FRLETEMAKVMGK------E-AGL-FVPSGTM 64 (359)
Q Consensus 4 ~~id~~~~~~~~~~-~~~~~a~~~~~--~---~~~~~~~~~~~-----~~l~~~la~~~~~------~-~~~-~~~~gt~ 64 (359)
..|||..+.+..+. +.+.+++.+.. . ....|+...+. .++++.++++++. + ..+ +++|+++
T Consensus 23 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~ 102 (391)
T 3bwn_A 23 FVVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGVVGNAATEDRYIVVGTGSTQ 102 (391)
T ss_dssp SCEECSSCCCGGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHH
T ss_pred CeeEcCCCCCCCCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHHhcCCCCCCCCeEEEeCChHH
Confidence 46899988887665 45555553322 1 22346666666 9999999999973 2 345 4455556
Q ss_pred HHHHHHHHhhhhcCC----eEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEE
Q 018243 65 GNLISVLVHCETRGS----EVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLI 140 (359)
Q Consensus 65 a~~~~l~~~~~~~g~----~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v 140 (359)
++..++.+++ ++|| +|++++|+|.+... .++..|.+++.++.+.++ ++ . +++++|
T Consensus 103 al~~~~~~l~-~~Gd~~~~~Vlv~~P~y~~~~~---~~~~~g~~~~~~~~d~~~------l~---~--------~~~k~v 161 (391)
T 3bwn_A 103 LCQAAVHALS-SLARSQPVSVVAAAPFYSTYVE---ETTYVRSGMYKWEGDAWG------FD---K--------KGPYIE 161 (391)
T ss_dssp HHHHHHHHHH-HTSSSSSEEEEECSSCCTHHHH---HHHTTCBTTEEEEEESTT------CC---C--------CSCEEE
T ss_pred HHHHHHHHhc-CCCCCCcceEEEcCCCchhHHH---HHHHcCCeEEEecCCHHH------cC---C--------CCCEEE
Confidence 7777777776 5999 99999999877553 377788899888764321 11 1 568888
Q ss_pred EEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee--eEEe
Q 018243 141 CLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG--SVIV 218 (359)
Q Consensus 141 ~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g--g~~~ 218 (359)
++ +.+|||||.+++ +|++.++.++++||+|++|.... ..+... ..+.++++.|+||.||.++. ||++
T Consensus 162 ~l-~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~~~----~~~l~~-~~~~~i~~~S~SK~~g~~GlRiG~~~ 230 (391)
T 3bwn_A 162 LV-TSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYWPH----YTPITR-RQDHDIMLFTFSKITGHAGSRIGWAL 230 (391)
T ss_dssp EE-ESSCTTTCCCCC-----CCC-----CCCEEEEECTTCSTT----TSCCCC-CBCCSEEEEEHHHHHSCGGGCEEEEE
T ss_pred EE-CCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCCCC----CCcccc-CCCCeEEEEechhhcCCCccceEEEE
Confidence 88 455669999986 23332222339999999975311 111111 12445777799999986553 8888
Q ss_pred c-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHH-------------HhHHHHhhhHHHHHHHHHHHHhcCCCceEec
Q 018243 219 G-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQ-------------ENVLVMLDGDHKKAKLLAEGLNQLKGLRVDV 284 (359)
Q Consensus 219 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------------~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~ 284 (359)
. ++++++.+.........+. +...+.++..+++ .+.++.++.+.++++++.+.|+++|++++..
T Consensus 231 ~~~~~l~~~l~~~~~~~~~~~--~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 308 (391)
T 3bwn_A 231 VKDKEVAKKMVEYIIVNSIGV--SKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPK 308 (391)
T ss_dssp ECCHHHHHHHHHHHHHHHSSC--CHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCC
T ss_pred ecCHHHHHHHHHHhcccccCC--CHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc
Confidence 6 8999998887766444444 3333444444443 2355567778889999999999987776532
Q ss_pred C------------CccceEEEEEeccchHHHHHHHHHHHHhcCceeccCC-----CcEEEEEeCCCCCHHHHHHHHHHHH
Q 018243 285 D------------AVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPES-----STRVRIVVHHQISANDVHYTLSCFQ 347 (359)
Q Consensus 285 ~------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-----~~~lRi~~~~~~~~~~i~~~~~~l~ 347 (359)
+ +..+.++|+.++.. +.+.+.|.++||.+.|+. .+++||+++ .+++++++++++|+
T Consensus 309 p~~~~~~f~~~~~~~~g~~~~~~~~~~-----~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~--~~~e~i~~~~~~L~ 381 (391)
T 3bwn_A 309 YPEAFCNYFGKSLESYPAFAWLGTKEE-----TDLVSELRRHKVMSRAGERCGSDKKHVRVSML--SREDVFNVFLERLA 381 (391)
T ss_dssp CCCEEETTTTEEECCCCSEEEEEESSS-----CCHHHHHHHTTEECEEGGGGTCCTTEEEEESC--SCHHHHHHHHHHHH
T ss_pred CCccccccccccCCCcceEEEecCCcH-----HHHHHHHHHCCEEEccCCCCCCCCCEEEEEec--CCHHHHHHHHHHHH
Confidence 2 12345789888741 356667789999997752 568999996 58999999999999
Q ss_pred HHHHHH
Q 018243 348 KIYAGV 353 (359)
Q Consensus 348 ~~~~~~ 353 (359)
+++++.
T Consensus 382 ~~~~~~ 387 (391)
T 3bwn_A 382 NMKLIK 387 (391)
T ss_dssp SCC---
T ss_pred HHHHhh
Confidence 887653
No 215
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.96 E-value=5.8e-27 Score=211.02 Aligned_cols=331 Identities=16% Similarity=0.135 Sum_probs=213.0
Q ss_pred cccccccCCCC----CChHHHHHHHHHcCCCCCCcc-CCChHHHHHHHHHHHHhC-CCCeEEcCCchHHHHHHHHHhhh-
Q 018243 3 TRTVDLRSDTV----TKPTEAMRAAMASAEVDDDVL-MHDPTAFRLETEMAKVMG-KEAGLFVPSGTMGNLISVLVHCE- 75 (359)
Q Consensus 3 ~~~id~~~~~~----~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~l~~~la~~~~-~~~~~~~~~gt~a~~~~l~~~~~- 75 (359)
.+++||.++.. ...+|++.+++.+.......+ .+.+...++++.++++++ .+..++++||++|+..++..+..
T Consensus 53 ~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGsea~~~al~~a~~~ 132 (429)
T 4e77_A 53 KAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGAPTEMEVKMAQLVTDLVPTMDMVRMVNSGTEATMSAIRLARGY 132 (429)
T ss_dssp CEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHH
T ss_pred CEEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCCCCHHHHHHHHHHHhhCCCCCEEEEeCcHHHHHHHHHHHHHHh
Confidence 35789988643 234689999988755443222 346778899999999985 45568999999999999987653
Q ss_pred hcCCeEEecCCCcceeecccccccc-------------CCc------cceeeecCCCCCCCHHHHHHHhcCCCCCccCCc
Q 018243 76 TRGSEVILGDNSHIHIYENGGISTI-------------GGV------HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPT 136 (359)
Q Consensus 76 ~~g~~vl~~~~~~~~~~~~~~~~~~-------------~g~------~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 136 (359)
..+++|++.+++|..... ..... .+. .+..++.+ |+++|++.+++.. ++
T Consensus 133 ~~~~~ii~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~-----~~ 200 (429)
T 4e77_A 133 TGRDKIIKFEGCYHGHAD--CLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYN-----DLASVRQAFEQYP-----QE 200 (429)
T ss_dssp HCCCEEEEETTCCCC--------------------CCCTTSCGGGGTTEEEECTT-----CHHHHHHHHHHST-----TT
T ss_pred hCCCEEEEEcCccCCCCh--hhhhhcCCcccccCCCCcCCCCCccCCceeecCCC-----CHHHHHHHHHhcC-----CC
Confidence 245677777666544332 00110 111 12222222 8999999997421 36
Q ss_pred eeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-
Q 018243 137 TRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG- 214 (359)
Q Consensus 137 ~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g- 214 (359)
+++|++++.++ .+|.. .+.+++++|.++|++||+++|+||+|... ..........+....|++ |++|.++++..
T Consensus 201 ~~~vi~ep~~~-~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pdi~--t~sK~~~~G~~~ 276 (429)
T 4e77_A 201 VACIIVEPVAG-NMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHVIPDLT--CLGKIIGGGMPV 276 (429)
T ss_dssp EEEEEECSSBC-TTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCSEE--EEEGGGGTTSCC
T ss_pred EEEEEECCccC-CCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCCCCCee--eecccccCCCCe
Confidence 78888866555 45554 44677999999999999999999998622 111111122222245654 66799875333
Q ss_pred eEEecCHHHHHHHHHHHH-hhCCCcchhHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhcC---CCceEecCCccc
Q 018243 215 SVIVGSKEFIKKARRLRK-TLGGGMRQVGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQL---KGLRVDVDAVET 289 (359)
Q Consensus 215 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~~~ 289 (359)
|++++++++++.+..... ..+.++..+++.++++..+++... ++..++..++.+++++.|+++ .++.... +..+
T Consensus 277 G~~~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g 355 (429)
T 4e77_A 277 GAFGGRREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPLVV-NHVG 355 (429)
T ss_dssp EEEEECHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEE-EEET
T ss_pred EEEEECHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEE-EEee
Confidence 788899998877543211 234444556777777777775331 234556666666666666552 1332221 3467
Q ss_pred eEEEEEeccch------------HHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 290 NIVYFEITEDS------------KLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 290 ~~~~~~~~~~~------------~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.++++.+.... .....++.+.|.++||.+.+++...+|++ ..++++++++++++|++++++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~--~~~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 356 GMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSAFEAGFMS--LAHSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp TEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSSTTSCEECC--TTCCHHHHHHHHHHHHHHHTT
T ss_pred eEEEEEEccCcccccccccccccHHHHHHHHHHHHHCCeEEeecCCCCEEEe--ccCCHHHHHHHHHHHHHHHHh
Confidence 88888876521 13457899999999999998877666665 479999999999999998764
No 216
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.96 E-value=7.5e-27 Score=209.98 Aligned_cols=324 Identities=17% Similarity=0.157 Sum_probs=216.1
Q ss_pred ccccccCCC---C-CChHHHHHHHHHcCCCCCCccC-CChHHHHHHHHHHHHh-CCCCeEEcCCchHHHHHHHHHh--hh
Q 018243 4 RTVDLRSDT---V-TKPTEAMRAAMASAEVDDDVLM-HDPTAFRLETEMAKVM-GKEAGLFVPSGTMGNLISVLVH--CE 75 (359)
Q Consensus 4 ~~id~~~~~---~-~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~l~~~la~~~-~~~~~~~~~~gt~a~~~~l~~~--~~ 75 (359)
++|||.++. + ..++|.+.+++.+.......++ ..+...++++.+++++ +.+..++++||++|+..++..+ ..
T Consensus 53 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~ea~~~al~~ar~~~ 132 (424)
T 2e7u_A 53 RYLDYVMSWGPLILGHAHPKVLARVRETLERGLTFGAPSPLEVALAKKVKRAYPFVDLVRFVNSGTEATMSALRLARGYT 132 (424)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHCTTCCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhh
Confidence 468998762 3 3456888888877543322233 3566789999999999 5556688999999999999863 32
Q ss_pred hcCCeEEecCCCcceeeccccccc-------------cCCc------cceeeecCCCCCCCHHHHHHHhcCCCCCccCCc
Q 018243 76 TRGSEVILGDNSHIHIYENGGIST-------------IGGV------HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPT 136 (359)
Q Consensus 76 ~~g~~vl~~~~~~~~~~~~~~~~~-------------~~g~------~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 136 (359)
++++|++.+++|..... + ... ..|+ +++.++.+ |+++|++.+++.. ++
T Consensus 133 -~~~~vi~~~~~yhg~~~-~-~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~-----d~~~le~~l~~~~-----~~ 199 (424)
T 2e7u_A 133 -GRPYIVKFRGNYHGHAD-G-LLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEYN-----DPEGLREVLKRRG-----EE 199 (424)
T ss_dssp -CCCEEEEETTCCCCCCG-G-GSEECCSSSCCBCEESSTTCCHHHHTTEEEECTT-----CHHHHHHHHHHHG-----GG
T ss_pred -CCCEEEEECCCcCCCcH-H-HHHhcCCcccccCCCCCCCCCCccCCceEeCCCC-----CHHHHHHHHHhCC-----CC
Confidence 55788888887765433 1 111 1222 23334432 8999999887310 25
Q ss_pred eeEEEEeccccCCCceec-ChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEeccccCCCce
Q 018243 137 TRLICLENTHANCGGRCL-SVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSKGLGAPV 213 (359)
Q Consensus 137 ~~~v~i~~~~~~ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~g~~~ 213 (359)
+++|++++.++ +||... +.+++++|.++ ++||+++|+||+|. +.. .+.. ...+....|++ |++|+++++.
T Consensus 200 ~~~vi~ep~~~-~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~-g~~--~g~~~~~~~~~~~~di~--s~sK~l~~G~ 272 (424)
T 2e7u_A 200 IAAIIFEPVVG-NAGVLVPTEDFLKALHEA-KAYGVLLIADEVMT-GFR--LAFGGATELLGLKPDLV--TLGKILGGGL 272 (424)
T ss_dssp EEEEEECSSBC-TTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTT-TTT--SSTTHHHHHHTCCCSEE--EECGGGGTTS
T ss_pred EEEEEEeCCCC-CCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcc-ccc--cchhHHHHHhCCCcchh--hhhhhhhCCc
Confidence 77888855444 589765 68999999999 99999999999986 222 1221 11222245654 7789997532
Q ss_pred -eeEEecCHHHHHHHHHHHH-hhCCCcchhHHHHHHHHHHHHHhH--HHHhhhHHHHHHHHHHHHhcC---CCceEecCC
Q 018243 214 -GSVIVGSKEFIKKARRLRK-TLGGGMRQVGVLCAAALVALQENV--LVMLDGDHKKAKLLAEGLNQL---KGLRVDVDA 286 (359)
Q Consensus 214 -gg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~ 286 (359)
.|++++++++++.+..... ..+.++..+++.++++..+++... ++..++..++.+++++.|+++ .++.... +
T Consensus 273 ~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~ 351 (424)
T 2e7u_A 273 PAAAYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTV-N 351 (424)
T ss_dssp SCEEEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEE-E
T ss_pred ceEEEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCceEE-E
Confidence 2778889888877543111 233444556677777777775432 235666777888888888764 1332211 2
Q ss_pred ccceEEEEEeccc-----------hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 287 VETNIVYFEITED-----------SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 287 ~~~~~~~~~~~~~-----------~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
..++++|+.+... ...+..++.+.|.++||.+.+++...+|++ ..++++++++++++|++++
T Consensus 352 ~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~--~~~t~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 352 RVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSNFEAAFLS--VAHREEDVEKTLEALRKAL 424 (424)
T ss_dssp EETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSSSSCEECC--TTCCHHHHHHHHHHHHHHC
T ss_pred eeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccCCCceEee--ccCCHHHHHHHHHHHHHhC
Confidence 4677889888641 123567899999899999988876656655 4799999999999998763
No 217
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.95 E-value=1.3e-26 Score=208.67 Aligned_cols=328 Identities=15% Similarity=0.114 Sum_probs=215.6
Q ss_pred ccccccCCC---CCC-hHHHHHHHHHcCCCCCCccC-CChHHHHHHHHHHHHhC-CCCeEEcCCchHHHHHHHHHhhh-h
Q 018243 4 RTVDLRSDT---VTK-PTEAMRAAMASAEVDDDVLM-HDPTAFRLETEMAKVMG-KEAGLFVPSGTMGNLISVLVHCE-T 76 (359)
Q Consensus 4 ~~id~~~~~---~~~-~~~~~~~a~~~~~~~~~~~~-~~~~~~~l~~~la~~~~-~~~~~~~~~gt~a~~~~l~~~~~-~ 76 (359)
++|||.++. +.+ .+|++.+++.+.......|+ ..+...++++.++++++ .+..++++||++|+..++..+.. .
T Consensus 53 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~ggsea~~~al~~a~~~~ 132 (427)
T 3fq8_A 53 RYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRAYT 132 (427)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHH
T ss_pred EEEECCCchhhhccCCCCHHHHHHHHHHHHhCCCcCCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhh
Confidence 578999874 233 35889988887554322222 56777899999999985 44568889999999999976543 2
Q ss_pred cCCeEEecCCCcceeeccccccccCCcc-------------------ceeeecCCCCCCCHHHHHHHhcCCCCCccCCce
Q 018243 77 RGSEVILGDNSHIHIYENGGISTIGGVH-------------------PRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTT 137 (359)
Q Consensus 77 ~g~~vl~~~~~~~~~~~~~~~~~~~g~~-------------------~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 137 (359)
.+++|++.+++|..... ......+.. ++.++.+ |+++|++.+++.. .++
T Consensus 133 ~~~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~-----~~~ 200 (427)
T 3fq8_A 133 GRDKIIKFEGCYHGHAD--MFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN-----DLEAVKALFAENP-----GEI 200 (427)
T ss_dssp CCCEEEEEETCCCCSCG--GGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-----CHHHHHHHHHHST-----TTE
T ss_pred CCCEEEEECCCcCCCCH--HHHHhcCCcccccCCCCCCCCCCcccCceeecCCC-----CHHHHHHHHHhCC-----CCE
Confidence 34678888877665443 112222211 2222322 8999999998421 368
Q ss_pred eEEEEeccccCCCceecC-hhhHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEeccccCCCce-
Q 018243 138 RLICLENTHANCGGRCLS-VEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSKGLGAPV- 213 (359)
Q Consensus 138 ~~v~i~~~~~~ptG~~~~-~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~g~~~- 213 (359)
++|+++++++ ++|...+ .+++++|.++|++||+++|+||+|. +. ..+.. ........|+ .|+||.++++.
T Consensus 201 ~~vi~~p~~~-~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~--~~g~~~~~~~~~~~~di--~t~sK~~~~G~~ 274 (427)
T 3fq8_A 201 AGVILEPIVG-NSGFIVPDAGFLEGLREITLEHDALLVFDEVIT-GF--RIAYGGVQEKFGVTPDL--TTLGKIIGGGLP 274 (427)
T ss_dssp EEEEECSSBC-TTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-BT--TTBTTHHHHHTTCCCSE--EEECGGGGTTSS
T ss_pred EEEEEcCCcC-CCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-cc--ccCcchhhHhcCCCCCh--hhhhhhhhCCcc
Confidence 8888866655 5676655 5779999999999999999999985 22 22221 1122224455 46679997432
Q ss_pred eeEEecCHHHHHHHHHHHH-hhCCCcchhHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhcC---CCceEecCCcc
Q 018243 214 GSVIVGSKEFIKKARRLRK-TLGGGMRQVGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQL---KGLRVDVDAVE 288 (359)
Q Consensus 214 gg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~~ 288 (359)
.|++++++++++.+..... ..+.++..++..++++..+++... +...++..++.+++++.|+++ .++... .+..
T Consensus 275 ~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~ 353 (427)
T 3fq8_A 275 VGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAAC-GGQV 353 (427)
T ss_dssp CEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCE-EEEE
T ss_pred eEEEEEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCeE-EEEe
Confidence 2778889999887653211 234445556777777777775331 234556666666666666553 022221 1346
Q ss_pred ceEEEEEeccc-----------hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 289 TNIVYFEITED-----------SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 289 ~~~~~~~~~~~-----------~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
+.++++.+... ......++.+.|.++||.+.+++...++ ++..++++++++++++|++++++
T Consensus 354 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~~r~~--~~~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 354 SGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQFEAGF--TSLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp TTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTTSCEE--CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCCCCEE--eeCcCCHHHHHHHHHHHHHHHHh
Confidence 77788877531 1123568899999999999888765444 45589999999999999998865
No 218
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.95 E-value=7.9e-27 Score=208.35 Aligned_cols=279 Identities=17% Similarity=0.137 Sum_probs=205.2
Q ss_pred HHHHHHHHHcCCCCC------CccCC-ChHHHHHHHHHHHHhCCCCeEE---cCCchHHHHHHHHHhhhhcCCeEEecC-
Q 018243 17 TEAMRAAMASAEVDD------DVLMH-DPTAFRLETEMAKVMGKEAGLF---VPSGTMGNLISVLVHCETRGSEVILGD- 85 (359)
Q Consensus 17 ~~~~~~a~~~~~~~~------~~~~~-~~~~~~l~~~la~~~~~~~~~~---~~~gt~a~~~~l~~~~~~~g~~vl~~~- 85 (359)
.+++.+++.+..... ..|.+ .+...++++.+++++|.+.... ++||++|+..++.+++ ++||+|+++.
T Consensus 37 ~~~vl~A~~~~~~~~~~~~~~~g~~y~~~~~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~-~~Gd~Vl~~~~ 115 (431)
T 3ht4_A 37 QFRVLESFGKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGIL-RPGDELLYITG 115 (431)
T ss_dssp HHHHHHHHHHTTCCGGGSCCCCTTCCSCHHHHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTC-CTTCEEEECSS
T ss_pred HHHHHHHHHHhchhhhhcCCCCCCCCChhhHHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhC-CCCCEEEEeCC
Confidence 367888887643221 12222 3567899999999999987654 7899999999998887 5999999998
Q ss_pred CCcceeeccc-------cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhh
Q 018243 86 NSHIHIYENG-------GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEY 158 (359)
Q Consensus 86 ~~~~~~~~~~-------~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~ 158 (359)
+.|.+..... ..++..|++++.++.++++.+|+++|++.++ +++++|+++++++||+|...+.++
T Consensus 116 ~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~--------~~tk~V~i~~sp~np~~~~~~~~~ 187 (431)
T 3ht4_A 116 KPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIH--------SNTKMIGIQRSKGYATRPSFTISQ 187 (431)
T ss_dssp SCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCC--------TTEEEEEEECSCTTSSSCCCCHHH
T ss_pred CCchhHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcC--------CCCeEEEEECCCCCCCCCcCCHHH
Confidence 8877655310 1244578899999888889999999999998 789999999888889999999999
Q ss_pred HHHHHHHHHH--cCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCC---ceeeEEecCHHHHHHHHHHHHh
Q 018243 159 TDSVGEIAKK--HGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGA---PVGSVIVGSKEFIKKARRLRKT 233 (359)
Q Consensus 159 l~~i~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~---~~gg~~~~~~~~~~~~~~~~~~ 233 (359)
+++|+++|++ +|+++|+|++|+.+... . .. ...++|+++.|++|++|+ +.||++++++++++.++.....
T Consensus 188 l~~i~~la~~~~~~~~livDea~~~~~~~--~-~~--~~~g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~ 262 (431)
T 3ht4_A 188 IKEMIAFVKEIKPDVVVFVDNCYGEFIEE--Q-EP--CHVGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTS 262 (431)
T ss_dssp HHHHHHHHHHHCTTCEEEEECTTCTTSSS--C-CG--GGTTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhhCCCCEEEEeCCChhhccC--C-Cc--cccCCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhcc
Confidence 9999999999 99999999997654432 1 11 223689999999999865 5679999999999988765443
Q ss_pred hCCC--cchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccce-----EEEEEeccchHHHHHH
Q 018243 234 LGGG--MRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETN-----IVYFEITEDSKLYAAC 306 (359)
Q Consensus 234 ~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 306 (359)
.+.+ .........++..+++... .++++..+++.++.+.|+++ |+++. +. ... ++.+.+.. .....+
T Consensus 263 ~~~g~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~a~~l~~~L~~~-g~~v~-p~-~~~~~~~li~~i~l~~--~~~~~~ 336 (431)
T 3ht4_A 263 PGIGAEAGASLYSLQEMYQGFFLAP-HVAGQALKGAIFTAAFLEKL-GMNTS-PA-WNAPRTDLIQSVQFDD--KDRMIA 336 (431)
T ss_dssp TTTTTSCSCCCSCSHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-TCCEE-SC-TTSCCSSSCCEEECCC--HHHHHH
T ss_pred CCcccccCccHHHHHHHHhHhhhHH-HHHHHHHHHHHHHHHHHHhC-cCEec-CC-CCCCCccEEEEEEeCC--HHHHHH
Confidence 3222 2111111223344444433 36778889999999999998 77763 22 222 66677764 247788
Q ss_pred HHHHHHhcC
Q 018243 307 LLKKLEEHG 315 (359)
Q Consensus 307 ~~~~l~~~g 315 (359)
+++.|++..
T Consensus 337 ~~~~l~~~~ 345 (431)
T 3ht4_A 337 FCQAIQYAS 345 (431)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHhcC
Confidence 999997653
No 219
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.95 E-value=5.4e-26 Score=201.78 Aligned_cols=278 Identities=14% Similarity=0.094 Sum_probs=200.8
Q ss_pred hHHHHHHHHHcCCCCC------CccCC-ChHHHHHHHHHHHHhCCCCeEE---cCCchHHHHHHHHHhhhhcCCeEEecC
Q 018243 16 PTEAMRAAMASAEVDD------DVLMH-DPTAFRLETEMAKVMGKEAGLF---VPSGTMGNLISVLVHCETRGSEVILGD 85 (359)
Q Consensus 16 ~~~~~~~a~~~~~~~~------~~~~~-~~~~~~l~~~la~~~~~~~~~~---~~~gt~a~~~~l~~~~~~~g~~vl~~~ 85 (359)
+.+++.+++.+..... ..|.+ ......+|+.+++++|.+.+++ ++||++|+..++.+++ ++||+|++++
T Consensus 45 n~~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~g~~~Le~~lA~l~g~e~alv~p~~~sGt~A~~~al~all-~pGD~Vl~~~ 123 (427)
T 3hvy_A 45 NQLKVLKAFQEERISESHFTNSSGYGYNDIGRDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGNL-RPNDTMMSIC 123 (427)
T ss_dssp HHHHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHTC-CTTCEEEECS
T ss_pred hHHHHHHHHHHHHHHHHhcccCcCCCCCchhHHHHHHHHHHHhCCCceEEeCCCCcHHHHHHHHHHHhc-CCCCEEEEeC
Confidence 3478888888754321 22332 3567899999999999998888 8999999999999988 5999999998
Q ss_pred -CCcceeeccc--------cccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEecc---ccCCCcee
Q 018243 86 -NSHIHIYENG--------GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENT---HANCGGRC 153 (359)
Q Consensus 86 -~~~~~~~~~~--------~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~---~~~ptG~~ 153 (359)
+.|....... ......|++++.++. +++.+|++++++.+++. +++++|+++++ ++||||.+
T Consensus 124 ~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~-~~~~~d~e~l~~~i~~~------~~tklV~i~~s~gyp~nptg~v 196 (427)
T 3hvy_A 124 GMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL-KDGKVDINTVKEELKKD------DSIKLIHIQRSTGYGWRKSLRI 196 (427)
T ss_dssp SSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC-BTTBCCHHHHHHHHHHC------TTEEEEEEESSCCSSSSCCCCH
T ss_pred CCCchhHHHHhccccchhhhHHHHcCCEEEEecC-CCCCcCHHHHHHHhhCC------CCCEEEEEECCCCCCCCccccH
Confidence 8876544100 124567888888887 67889999999999831 47899999884 34477664
Q ss_pred cChhhHHHHHHHHHH--cCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCC---ceeeEEecCHHHHHHHH
Q 018243 154 LSVEYTDSVGEIAKK--HGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGA---PVGSVIVGSKEFIKKAR 228 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~---~~gg~~~~~~~~~~~~~ 228 (359)
.++++|+++|++ +|+++++|++|+.+... . .+...++|+++.|+||++|+ +.||+++++++++++++
T Consensus 197 ---~dl~~i~~ia~~~~~g~~livD~a~~~~~~~--~---~p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~ 268 (427)
T 3hvy_A 197 ---AEIAEIIKSIREVNENVIVFVDNCYGEFVEE--K---EPTDVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQAT 268 (427)
T ss_dssp ---HHHHHHHHHHHHHCSSSEEEEECTTCTTTSS--S---CGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHH
T ss_pred ---HHHHHHHHHHHHhCCCCEEEEECCccccccC--C---CCcccCCeEEEECCcccccccccceEEEEEECHHHHHHHH
Confidence 569999999999 89999999997544321 1 12223789999999999987 67899999999999987
Q ss_pred HHHHhhCCC--cchhHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccce-----EEEEEeccchH
Q 018243 229 RLRKTLGGG--MRQVGVLCAAALVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETN-----IVYFEITEDSK 301 (359)
Q Consensus 229 ~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~-----~~~~~~~~~~~ 301 (359)
......+.. ...+...+..+...++... .++++..+++.++++.|+++ |+++. +. .+. ++.+.+.. .
T Consensus 269 ~~~~~~~~g~~~~~~~~~a~~~~~gl~~~~-~r~~~~~~~a~~la~~L~~~-g~~V~-p~-~~~~~~~li~~~~l~~--~ 342 (427)
T 3hvy_A 269 FRVTVPGIGGECGSTFGVMRSLYEGLFMAP-HVTIEAVKGAVFCARIMELA-GFDVL-PK-YNDKRTDIIQAIKFND--E 342 (427)
T ss_dssp HHHSCTTTGGGCCCCTTCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHT-TCEEE-SC-TTSCCSSSEEEEECSS--H
T ss_pred HHhhcCCcccccCCCHHHHHHHHHhHhHHH-HHHHHHHHHHHHHHHHHHhC-CCeec-CC-CCCCCceEEEEEeCCC--H
Confidence 654322221 1111111333444444433 37788889999999999999 77773 32 333 77777764 2
Q ss_pred HHHHHHHHHHHhcC
Q 018243 302 LYAACLLKKLEEHG 315 (359)
Q Consensus 302 ~~~~~~~~~l~~~g 315 (359)
....+|++.|+...
T Consensus 343 ~~~~~f~~~l~~~~ 356 (427)
T 3hvy_A 343 KKLIDFIKGIQTAS 356 (427)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcccc
Confidence 46778999997653
No 220
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.95 E-value=2.1e-27 Score=214.10 Aligned_cols=292 Identities=13% Similarity=0.061 Sum_probs=192.5
Q ss_pred ccCCChHHHHHHHHHHHHhCCCCeEEcCC-chHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeec-
Q 018243 33 VLMHDPTAFRLETEMAKVMGKEAGLFVPS-GTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN- 110 (359)
Q Consensus 33 ~~~~~~~~~~l~~~la~~~~~~~~~~~~~-gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~- 110 (359)
.+...+...++++.+++ +|.+..+++++ |++++..++.+++ ++|++|++++++|.+... + +...|++++.++.
T Consensus 52 ~~~~~~~~~~~~~~la~-~g~~~~v~~~~G~t~a~~~~~~a~~-~~gd~Vlv~~~~h~s~~~-~--~~~~G~~~~~v~~~ 126 (446)
T 2x3l_A 52 LHHPEEVILKSMKQVEK-HSDYDGYFLVNGTTSGILSVIQSFS-QKKGDILMARNVHKSVLH-A--LDISQQEGHFIETH 126 (446)
T ss_dssp TTSCSSHHHHHHHHHCS-CTTEEEEEESSHHHHHHHHHHHTTT-TSSSCEEECTTCCHHHHH-H--HHHHTCCEEECEEE
T ss_pred ccCcchHHHHHHHHHHh-cCCCceEEEeCCHHHHHHHHHHHhc-CCCCEEEEecCccHHHHH-H--HHHcCCeEEEEeCe
Confidence 34456778999999999 99886655555 5688888888887 599999999999998776 3 5667889988876
Q ss_pred -CCC----CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhh
Q 018243 111 -NQD----GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAV 185 (359)
Q Consensus 111 -~~~----~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~ 185 (359)
+++ +.+|++.| +. +++++|++++ +| ++|.+++ +++|.++|++||+++|+|++|+. ...
T Consensus 127 ~~~~~~~~~~~d~~~l---~~--------~~~~~v~~~~-~n-~~G~~~~---l~~I~~l~~~~~~~livDea~~~-~~~ 189 (446)
T 2x3l_A 127 QSPLTNHYNKVNLSRL---NN--------DGHKLVVLTY-PN-YYGETFN---VEEVIKSLHQLNIPVLIDEAHGA-HFG 189 (446)
T ss_dssp ECTTTSSEEEEEC------------------CCEEEEES-SC-TTSCCCC---HHHHHHHHHHTTCCEEEECTTCT-TTT
T ss_pred eccccCcCCCCCHHHH---cC--------CCceEEEEEC-CC-CCeEecC---HHHHHHHHHhcCCeEEEcchhhh-hhc
Confidence 544 55788777 33 6788999966 44 6999988 79999999999999999999765 221
Q ss_pred hcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHH--HHHHHHHhhCCCcchhHHHHHHHHHHHHHhHHHHhhh
Q 018243 186 ALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIK--KARRLRKTLGGGMRQVGVLCAAALVALQENVLVMLDG 262 (359)
Q Consensus 186 ~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 262 (359)
+.+........++|+++.|+||+++++.| |+++.++++++ .++.....+..+. .+....++...+++.......++
T Consensus 190 f~~~~~~~~~~g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~~~~~~~~~s-~~~~~~aal~~a~~~l~~~g~~~ 268 (446)
T 2x3l_A 190 LQGFPDSTLNYQADYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIEYLSYFQTSS-PSYLIMASLESAAQFYKTYDSTL 268 (446)
T ss_dssp STTSCCCGGGGTCSEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHHHHHHHSCSS-CCHHHHHHHHHHHHHHHHCCCHH
T ss_pred cCCCCCChHHcCCCEEEECCccccccccccEEEEEcCCcCCHHHHHHHHHHHcCCC-chHHHHHHHHHHHHHHHHhCHHH
Confidence 11211111223679999999998766555 88887666543 3322222222222 12222222222332222111111
Q ss_pred HHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHH
Q 018243 263 DHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYT 342 (359)
Q Consensus 263 ~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~ 342 (359)
..++...+.+.+++. ++++..+. ...++++.++. .+..++.+.|.++||.+...+..++|++++...+++++ ++
T Consensus 269 ~~~~~~~l~~~l~~~-g~~~~~~~-~~~~l~i~~~~---~~~~~l~~~L~~~GI~v~~~g~~~iRi~~~~~~t~e~i-~l 342 (446)
T 2x3l_A 269 FFAKRAQLIECLENK-GFEMLQVD-DPLKLLIKYEG---FTGHDIQNWFMNAHIYLELADDYQALAILPLWHHDDTY-LF 342 (446)
T ss_dssp HHHHHHHHHHHHHHH-TCEEEECS-STTEEEEECTT---SCHHHHHHHHHHTTEEESEECSSCEEEECCCCCTTCCC-CH
T ss_pred HHHHHHHHHHHHHHc-CCEECcCC-CCeEEEEEeCC---cCHHHHHHHHHHCCCEEEecCCCEEEEEeecCCCHHHH-HH
Confidence 233333334444433 77765432 34568888763 46778999998889999744567899999888899999 99
Q ss_pred HHHHHHHHHHH
Q 018243 343 LSCFQKIYAGV 353 (359)
Q Consensus 343 ~~~l~~~~~~~ 353 (359)
+++|+++++++
T Consensus 343 ~~aL~~~~~~~ 353 (446)
T 2x3l_A 343 DSLLRKIEDMI 353 (446)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHHHHhh
Confidence 99999988765
No 221
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.95 E-value=1.1e-26 Score=208.43 Aligned_cols=307 Identities=12% Similarity=-0.033 Sum_probs=213.4
Q ss_pred ccccccCCCCCChH-HHHHHHHHcCCC--CCC--ccCCCh-H---HHHHHHHHHHHhC------CC--CeEEcCCchHHH
Q 018243 4 RTVDLRSDTVTKPT-EAMRAAMASAEV--DDD--VLMHDP-T---AFRLETEMAKVMG------KE--AGLFVPSGTMGN 66 (359)
Q Consensus 4 ~~id~~~~~~~~~~-~~~~~a~~~~~~--~~~--~~~~~~-~---~~~l~~~la~~~~------~~--~~~~~~~gt~a~ 66 (359)
..|||..+.+..+. +.+.+++.+... +.. .|.... + ..++++.++++++ .+ ..++++|+++++
T Consensus 57 ~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al 136 (427)
T 2hox_A 57 CSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLI 136 (427)
T ss_dssp CCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHH
T ss_pred ceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHH
Confidence 45888887776555 667777776541 222 265555 5 7999999999986 22 235566667788
Q ss_pred HHHHHHh--------hhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCcee
Q 018243 67 LISVLVH--------CETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTR 138 (359)
Q Consensus 67 ~~~l~~~--------~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 138 (359)
..++.++ + ++||.|+++.|+|..... .++..|.+++.+. +|++.|++.++ ++++
T Consensus 137 ~~~~~~l~~~~~~~~~-~~Gd~Vlv~~P~y~~~~~---~~~~~g~~~~~~~------~d~~~l~~~~~--------~~~k 198 (427)
T 2hox_A 137 HGLVISLSPNMTATPD-APESKVVAHAPFYPVFRE---QTKYFDKKGYVWA------GNAANYVNVSN--------PEQY 198 (427)
T ss_dssp HHHHHHHSCCTTTCTT-SCCEEEEECSSCCHHHHH---HHHHSCBTTEEEE------EEGGGGTTCSC--------GGGE
T ss_pred HHHHHHHhhccccccC-CCCCEEEEeCCCcccHHH---HHHHcCCeeeeec------CCHHHHHHhhc--------CCce
Confidence 8888777 5 599999999999866443 3667788877543 47778887776 6788
Q ss_pred EEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee--eE
Q 018243 139 LICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG--SV 216 (359)
Q Consensus 139 ~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g--g~ 216 (359)
+|++++ ++||||.+++ +.++ ++..+.|+++ +. . ..+...+..+.++++.|+||.+|.++. ||
T Consensus 199 ~v~l~~-p~NPtG~~~~-~~l~---------~~~~i~d~~~-~~--~--~~s~~~~~~~~~i~~~S~SK~~g~~G~RiG~ 262 (427)
T 2hox_A 199 IEMVTS-PNNPEGLLRH-AVIK---------GCKSIYDMVY-YW--P--HYTPIKYKADEDILLFTMSKFTGHSGSRFGW 262 (427)
T ss_dssp EEEEES-SCTTTCCCCC-CSST---------TCEEEEECTT-CS--T--TTSCCCSCBCCSEEEEEHHHHTSCGGGCCEE
T ss_pred EEEEcC-CCCCcccccH-HHHc---------CCCEEEeecc-cC--C--CCCccccCCCceEEEEeChhcCCCCCceEEE
Confidence 998855 5669999999 5331 5678889875 21 1 112222223556788899999986542 88
Q ss_pred Eec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHH--------------hHHHHhhhHHHHHHHHHHHHhcCCCce
Q 018243 217 IVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQE--------------NVLVMLDGDHKKAKLLAEGLNQLKGLR 281 (359)
Q Consensus 217 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------------~~~~~~~~~~~~~~~l~~~l~~~~g~~ 281 (359)
+++ ++++++.++........+.+ ...+.++...++. +++..++++.++++++.+.|++++|+.
T Consensus 263 ~~~~~~~l~~~l~~~~~~~~~~~~--~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 340 (427)
T 2hox_A 263 ALIKDESVYNNLLNYMTKNTEGTP--RETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFS 340 (427)
T ss_dssp EEECCHHHHHHHHHHHHHHTSSCC--HHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEE
T ss_pred EEECCHHHHHHHHHHHHhcCCCCC--HHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCcc
Confidence 888 69999998887766554443 3333333333432 233355677888999999999987776
Q ss_pred E--ec-----------CCccceEEEEEeccchHHHHHHHHHHH-HhcCceeccC-----CCcEEEEEeCCCCCHHHHHHH
Q 018243 282 V--DV-----------DAVETNIVYFEITEDSKLYAACLLKKL-EEHGVLVMPE-----SSTRVRIVVHHQISANDVHYT 342 (359)
Q Consensus 282 ~--~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~-----~~~~lRi~~~~~~~~~~i~~~ 342 (359)
+ .. .+..++++|+.++. +..++.+.| .++||.+.|+ +.+++|+++. .++++++++
T Consensus 341 ~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~----~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~--~~~e~l~~~ 414 (427)
T 2hox_A 341 YQELPQSEYCNYFRRMRPPSPSYAWVKCEW----EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLI--KTQDDFDQL 414 (427)
T ss_dssp CCCCCSCEEETTTTEEECCCCSEEEEEECS----GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECS--SCHHHHHHH
T ss_pred ccccccccccccccccCCCCceEEEEECCC----cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEec--CCHHHHHHH
Confidence 5 11 23458899999975 344677776 6899999775 2578999996 589999999
Q ss_pred HHHHHHHHHH
Q 018243 343 LSCFQKIYAG 352 (359)
Q Consensus 343 ~~~l~~~~~~ 352 (359)
+++|++++++
T Consensus 415 l~~l~~~~~~ 424 (427)
T 2hox_A 415 MYYLKDMVKA 424 (427)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhh
Confidence 9999988753
No 222
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.95 E-value=5.7e-26 Score=204.90 Aligned_cols=284 Identities=16% Similarity=0.109 Sum_probs=191.6
Q ss_pred HHHHHHHHHHHHhCCCCe--EEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCccceeeecCCCCC
Q 018243 39 TAFRLETEMAKVMGKEAG--LFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVHPRTVKNNQDGT 115 (359)
Q Consensus 39 ~~~~l~~~la~~~~~~~~--~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 115 (359)
...++++.+++++|.+.. +++++|+.++..++.++..++|++|+++.++|.++.... ..++..|++++.++. +++.
T Consensus 109 ~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~ 187 (438)
T 1wyu_A 109 ATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGR 187 (438)
T ss_dssp HHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTB
T ss_pred HHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-cCCc
Confidence 357889999999999754 566777744455544444468999999999998876411 112457889998876 4567
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecc-cccchhhhcCchhHhh
Q 018243 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGA-RIFNAAVALGVPVRRL 194 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a-~~~~~~~~~~~~~~~~ 194 (359)
+|+++ ++ +++++|+++++ ||||.+.+ +++|.++|+++|+++|+|.. ++++... .. ..+
T Consensus 188 ~d~~~----i~--------~~t~~v~i~~p--n~tG~~~~---l~~i~~la~~~g~~vivd~d~~a~g~~~---~~-~~~ 246 (438)
T 1wyu_A 188 TPLPE----VG--------EEVGAVVVQNP--NFLGALED---LGPFAEAAHGAGALFVAVADPLSLGVLK---PP-GAY 246 (438)
T ss_dssp CCCCC----CC--------TTEEEEEEESS--CTTSBCCC---HHHHHHHHHHTTCEEEEECCTTGGGTBC---CH-HHH
T ss_pred cCHHH----hC--------CCeEEEEEECC--CCCeEEec---HHHHHHHHHHcCCEEEEEechhhccCcC---CC-ccC
Confidence 77765 55 68999999775 69999886 89999999999999997733 4344321 11 222
Q ss_pred hcCccEEEEeccc-----cCCCceeeEEecCHHHHHHHHHH-------------------------HH-hhCCCcch-hH
Q 018243 195 VQAADSASVCLSK-----GLGAPVGSVIVGSKEFIKKARRL-------------------------RK-TLGGGMRQ-VG 242 (359)
Q Consensus 195 ~~~~d~~~~s~~K-----~~g~~~gg~~~~~~~~~~~~~~~-------------------------~~-~~~~~~~~-~~ 242 (359)
++|++++|.+| ++++|..|+++.++++.+.+... +. ....+... ..
T Consensus 247 --g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~ 324 (438)
T 1wyu_A 247 --GADIAVGDGQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQ 324 (438)
T ss_dssp --TCSEEEEECTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCH
T ss_pred --CCCEEEECCcccCCCccCCCCCeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHH
Confidence 78999999555 45566448899888776553110 11 11111100 11
Q ss_pred HHHH-HH--HHHH-HHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCcee
Q 018243 243 VLCA-AA--LVAL-QENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLV 318 (359)
Q Consensus 243 ~~~~-~~--~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~ 318 (359)
..+. ++ +..+ +...++..++..++++++.+.|+++||+++..+......+.+.++ .+..++.++|.++||.+
T Consensus 325 ~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~L~~~gi~v 400 (438)
T 1wyu_A 325 LTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALALP----KDPEAVRRALAERGFHG 400 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEECS----SCHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCCCeEEEEEEeCC----CCHHHHHHHHHHCCcee
Confidence 1111 11 2222 233455777788999999999999989988543212222334433 25778999998899998
Q ss_pred --ccCC---CcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 018243 319 --MPES---STRVRIVVHHQISANDVHYTLSCFQKIY 350 (359)
Q Consensus 319 --~~~~---~~~lRi~~~~~~~~~~i~~~~~~l~~~~ 350 (359)
.++. .+++|++++..++++++++++++|++++
T Consensus 401 ~~~~~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 401 ATPVPREYGENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp CEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred ccccccccCCCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 4442 6789999988899999999999998764
No 223
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.94 E-value=1.4e-25 Score=203.66 Aligned_cols=330 Identities=15% Similarity=0.099 Sum_probs=209.6
Q ss_pred cccccccCCCC----CChHHHHHHHHHcCCCC-----CCccCCChHHHHHHHH----HHHHh--CCCCeEEcCCchHHHH
Q 018243 3 TRTVDLRSDTV----TKPTEAMRAAMASAEVD-----DDVLMHDPTAFRLETE----MAKVM--GKEAGLFVPSGTMGNL 67 (359)
Q Consensus 3 ~~~id~~~~~~----~~~~~~~~~a~~~~~~~-----~~~~~~~~~~~~l~~~----la~~~--~~~~~~~~~~gt~a~~ 67 (359)
.++|||.++.. ...+|++.+++.+.... ...|+. ....++++. +++++ +.+..++++||++|+.
T Consensus 63 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~~~~~~v~f~~sGseA~~ 141 (472)
T 1ohv_A 63 NRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAPKGMSQLITMACGSCSNE 141 (472)
T ss_dssp CEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHHHHH
T ss_pred CEEEECCCCHhhcccCCCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCCCCcCEEEEeCCchhHHH
Confidence 35789977632 33469999999885421 112332 222344455 44455 3445789999999999
Q ss_pred HHHHHhhh------h------------------cC---CeEEecCCCcceeeccccccccCCccc-----------eeee
Q 018243 68 ISVLVHCE------T------------------RG---SEVILGDNSHIHIYENGGISTIGGVHP-----------RTVK 109 (359)
Q Consensus 68 ~~l~~~~~------~------------------~g---~~vl~~~~~~~~~~~~~~~~~~~g~~~-----------~~v~ 109 (359)
.++..++. + +| ++|++.+++|..... + .....|... ..++
T Consensus 142 ~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~-~-~~~~~g~~~~~~~~~~~~~~~~~~ 219 (472)
T 1ohv_A 142 NAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTM-G-CLATTHSKAIHKIDIPSFDWPIAP 219 (472)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSH-H-HHHHCCSCHHHHTTSCCCCCCEEC
T ss_pred HHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccH-H-HHhcCCCccccccCCCCCCCcccC
Confidence 99998841 0 24 788888877655433 1 122323211 1111
Q ss_pred cCC-CC-------------CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEE
Q 018243 110 NNQ-DG-------------TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLH 174 (359)
Q Consensus 110 ~~~-~~-------------~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li 174 (359)
.+. .+ ..|+++|++.++++.+. ..++++|++++.++ ++|. .++.+++++|+++|++||+++|
T Consensus 220 ~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~--~~~~~~vive~v~~-~~G~~~~~~~~l~~l~~l~~~~g~lli 296 (472)
T 1ohv_A 220 FPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKK--KKTVAGIIVEPIQS-EGGDNHASDDFFRKLRDISRKHGCAFL 296 (472)
T ss_dssp CCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEECSSBC-TTTCBCCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCcccCccccccccchhHHHHHHHHHHHHHHhcCCC--CCCEEEEEEcCCcC-CCCCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 110 00 12578888888731000 01788999977655 6896 5678999999999999999999
Q ss_pred EecccccchhhhcCc--hhHhhhcC--ccEEEEeccccC-CCceeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHH
Q 018243 175 IDGARIFNAAVALGV--PVRRLVQA--ADSASVCLSKGL-GAPVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAAL 249 (359)
Q Consensus 175 ~D~a~~~~~~~~~~~--~~~~~~~~--~d~~~~s~~K~~-g~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (359)
+||+|.. ++..+. ....+... +|++ +++|++ + ||+++ ++++. .+ .....+.++..+++.++++.
T Consensus 297 ~DEv~~g--~g~~g~~~~~~~~gv~~~~Di~--t~sK~~l~---GG~~~-~~~~~-~~--~~~~~~~T~~~~~~~~aaa~ 365 (472)
T 1ohv_A 297 VDEVQTG--GGSTGKFWAHEHWGLDDPADVM--TFSKKMMT---GGFFH-KEEFR-PN--APYRIFNTWLGDPSKNLLLA 365 (472)
T ss_dssp EECTTTT--TTTTSSSSGGGGGCCSSCCSEE--EECGGGSS---EEEEE-CGGGS-CS--SSSSSCCSSSSCHHHHHHHH
T ss_pred EeCcccC--CCCCCCchhccccCCCCCCCEE--EEcccccc---CCccC-chhhc-cc--ccccccCccCccHHHHHHHH
Confidence 9999862 222222 22222111 5654 677984 4 46665 55542 11 11123344455667777777
Q ss_pred HHHHHhHH-HHhhhHHHHHHHHHHHHhcC----CC-ceEecCCccceEEEEEeccchHHHHHHHHHHHHhcCceeccCCC
Q 018243 250 VALQENVL-VMLDGDHKKAKLLAEGLNQL----KG-LRVDVDAVETNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESS 323 (359)
Q Consensus 250 ~~l~~~~~-~~~~~~~~~~~~l~~~l~~~----~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~ 323 (359)
.+++...+ ...++..++.++|++.|+++ |+ +... +..+.++++.+.. ......+.+.|.++||.+.+++.
T Consensus 366 aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~--~~~g~~~~~~~~~--~~~~~~~~~~l~~~Gv~~~~~g~ 441 (472)
T 1ohv_A 366 EVINIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRV--RGRGTFCSFDTPD--ESIRNKLISIARNKGVMLGGCGD 441 (472)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEE--EEETTEEEEECSS--HHHHHHHHHHHHHTTEECEEETT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEee--cCCceEEEEEeCC--hhHHHHHHHHHHHCCeEEecCCC
Confidence 77754332 35566777888888887764 43 3322 2357777777754 13567899999899999988877
Q ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 324 TRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 324 ~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.++|++++..++++++++++++|+++++++
T Consensus 442 ~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 442 KSIRFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp TEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999988754
No 224
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.94 E-value=2.1e-24 Score=192.13 Aligned_cols=334 Identities=15% Similarity=0.141 Sum_probs=216.5
Q ss_pred cccccccCC----CCCChHHHHHHHHHcCCCCCC-ccCCChHHHHHHHHHHHHhC-CCCeEEcCCchHHHHHHHHHhhhh
Q 018243 3 TRTVDLRSD----TVTKPTEAMRAAMASAEVDDD-VLMHDPTAFRLETEMAKVMG-KEAGLFVPSGTMGNLISVLVHCET 76 (359)
Q Consensus 3 ~~~id~~~~----~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~l~~~la~~~~-~~~~~~~~~gt~a~~~~l~~~~~~ 76 (359)
.++|||.++ +....+|++.+++.++..... .....+...++.+.+++.++ .+...+++||++|++.+++.++..
T Consensus 87 ~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~~~~~~~~~~~lae~l~~~~p~~~~v~f~~SGsEA~e~AiklAr~~ 166 (454)
T 4ao9_A 87 HRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINLTGHNLLEGRLARLICERFPQIEQLRFTNSGTEANLMALTAALHF 166 (454)
T ss_dssp CEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSCCCSEESSHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHH
T ss_pred CEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCCccCCcHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHhc
Confidence 367898875 233445899888877554322 23345667889999999885 455688899999999999988753
Q ss_pred cC-CeEEecCC-CcceeeccccccccC--CccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018243 77 RG-SEVILGDN-SHIHIYENGGISTIG--GVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 77 ~g-~~vl~~~~-~~~~~~~~~~~~~~~--g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
.| ++|+.... +|......+...... ......++.+ |.+.+++.++++. +++.+|++++..++.+-.
T Consensus 167 tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~n-----d~~~l~~~l~~~~-----~~iAavIvEPv~g~~G~~ 236 (454)
T 4ao9_A 167 TGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYN-----DAQTARAQIERHG-----PEIAVVLVEPMQGASGCI 236 (454)
T ss_dssp HTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTT-----CHHHHHHHHHHTG-----GGEEEEEECSEESTTTCE
T ss_pred ccCCeEEEEeCCcCCccccccccccCccCCCCcccCCCc-----hHHHHHHHHhhcC-----CceEEEEeccccCCCCcc
Confidence 33 45665444 444333211101111 1122233443 8999999998532 578999999998865445
Q ss_pred ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCC--CceeeEEecCHHHHHHHHHH
Q 018243 153 CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLG--APVGSVIVGSKEFIKKARRL 230 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g--~~~gg~~~~~~~~~~~~~~~ 230 (359)
..+.+++++|+++|++||+++|+||++. |-.+ .+.....+.-.+|+++++ |.+| .|. |.+.+++++++.+...
T Consensus 237 ~p~~~fL~~lr~lc~~~g~lLI~DEV~t-GR~G-~~~a~e~~gv~PDi~t~g--K~lggG~Pi-ga~~~~~ei~~~~~~~ 311 (454)
T 4ao9_A 237 PGQPDFLQALRESATQVGALLVFDEVMT-SRLA-PHGLANKLGIRSDLTTLG--KYIGGGMSF-GAFGGRADVMALFDPR 311 (454)
T ss_dssp ECCHHHHHHHHHHHHHHTCEEEEECTTG-GGGS-TTCHHHHHTCCCSEEEEE--GGGGTTSSC-EEEEECHHHHGGGCTT
T ss_pred CCchhhHHHHHHHHhhcCCEEEEECCCc-CCCc-cccchhccCCCCcEEEec--cccCCCCcc-eeeeeHHHHHHHHhhc
Confidence 5667999999999999999999999985 4222 111222233357877655 6554 344 5577888888775321
Q ss_pred H--HhhCCCcchhHHHHHHHHHHHHHhH-HHHhhhHHHHHHHHHHHHhcC---CCceEecCCccceEEEEEeccc-----
Q 018243 231 R--KTLGGGMRQVGVLCAAALVALQENV-LVMLDGDHKKAKLLAEGLNQL---KGLRVDVDAVETNIVYFEITED----- 299 (359)
Q Consensus 231 ~--~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~----- 299 (359)
. ...++|++.+++.+++++.+|+... ++..++..++.++|++.|+++ .++.... ...+.++.+.+...
T Consensus 312 ~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v-rg~G~m~gi~f~~~~~~~~ 390 (454)
T 4ao9_A 312 TGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAMQF-TGIGSLMNAHFVQGDVRSS 390 (454)
T ss_dssp TCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCEE-EEETTEEEEESCCSCCCSG
T ss_pred cCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCEEE-eeeceEEEEEEecCCCCCH
Confidence 1 1246677778888888888886542 235566677777777777653 1222111 12444555544221
Q ss_pred ------hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 018243 300 ------SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCEE 356 (359)
Q Consensus 300 ------~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 356 (359)
+......+...|.++||++.|.+ ++.++..+|++|+|+++++|++++.++..-
T Consensus 391 ~~~~~~d~~~~~~~~~~ll~~Gv~~~p~~----~~~~s~~~T~~dId~~l~al~~~l~~~~a~ 449 (454)
T 4ao9_A 391 EDLAAVDGRLRQLLFFHLLNEDIYSSPRG----FVVLSLPLTDADIDRYVAAIGSFIGGHGAL 449 (454)
T ss_dssp GGGTTCCHHHHHHHHHHHHHTTEECCTTC----EEECCTTCCHHHHHHHHHHHHHHHHHSGGG
T ss_pred HHHHhhhHHHHHHHHHHHHHCCEEEcCCC----CEEEeCCCCHHHHHHHHHHHHHHHHhcccc
Confidence 11234567778889999997754 344555799999999999999999987653
No 225
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.94 E-value=2.9e-25 Score=194.73 Aligned_cols=319 Identities=14% Similarity=0.068 Sum_probs=207.1
Q ss_pred cccccccCCCCCChHHHHHHHHHcCCCCCC------------ccCCChHHHHHHHHHHHHhCCCC---eEE-cCCchHHH
Q 018243 3 TRTVDLRSDTVTKPTEAMRAAMASAEVDDD------------VLMHDPTAFRLETEMAKVMGKEA---GLF-VPSGTMGN 66 (359)
Q Consensus 3 ~~~id~~~~~~~~~~~~~~~a~~~~~~~~~------------~~~~~~~~~~l~~~la~~~~~~~---~~~-~~~gt~a~ 66 (359)
|..+.|.+.-++..+++++++|.+...... .........+.|+.+++++|.+. .++ ++|||+++
T Consensus 25 m~~~yl~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~ 104 (386)
T 3qm2_A 25 MAQVFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQF 104 (386)
T ss_dssp --CCEECCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHH
T ss_pred hccCccccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHH
Confidence 344556666666667999999987543211 01113456889999999999963 355 47999999
Q ss_pred HHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecC--CCCC-CCHHHHHHHhcCCCCCccCCceeEEEEe
Q 018243 67 LISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNN--QDGT-MDIDLIEAAIRDPKGEIVYPTTRLICLE 143 (359)
Q Consensus 67 ~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~-~~~~~l~~~l~~~~~~~~~~~~~~v~i~ 143 (359)
..++..+. ++|+++++...++++... ...++..| ++..++.+ .+|. +++++++..++ +++++|++.
T Consensus 105 n~ai~~l~-~~gd~v~~~~~~~~~~~~-~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~--------~~t~lV~~~ 173 (386)
T 3qm2_A 105 AGVPLNLL-GDKTTADYVDAGYWAASA-IKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLS--------DNAAYLHYC 173 (386)
T ss_dssp HHHHHHHC-TTCCEEEEEESSHHHHHH-HHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCC--------TTCSCEEEC
T ss_pred HHHHHhcc-CCCCeEEEEeCCHHHHHH-HHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcC--------CCCcEEEEE
Confidence 99999988 589987755554444321 12355667 77777766 4554 67777777777 789998884
Q ss_pred ccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCH
Q 018243 144 NTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSK 221 (359)
Q Consensus 144 ~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~ 221 (359)
+ .+|.||.. .|.+++ . +|+++++|.+|++|..+ ..+.. .|++++|.+|++| |.| |+++.++
T Consensus 174 h-~et~tG~~i~pi~~i---~-----~g~~~~vDa~qs~g~~p---idv~~----~~~~~~s~hK~lG-P~G~g~l~v~~ 236 (386)
T 3qm2_A 174 P-NETIDGIAIDETPDF---G-----PEVVVTADFSSTILSAP---LDVSR----YGVIYAGAQKNIG-PAGLTLVIVRE 236 (386)
T ss_dssp S-EETTTTEECCCCCCC---C-----TTCCEEEECTTTTTSSC---CCGGG----CSEEEEETTTTTC-CTTEEEEEEEG
T ss_pred C-CcCCcCEecCchhhh---c-----CCCEEEEEcccccCCCC---CCccc----cCEEEEecccccC-CCccEEEEECH
Confidence 4 45578996 664444 2 79999999999776553 22333 2467789999997 777 8888876
Q ss_pred HHHHHHH----------HH-HHh-hCCCcchhHHHHH-HHHHHH-HH-hHHHHhhhHHHHHHHHHHHHhcCCCc-eEecC
Q 018243 222 EFIKKAR----------RL-RKT-LGGGMRQVGVLCA-AALVAL-QE-NVLVMLDGDHKKAKLLAEGLNQLKGL-RVDVD 285 (359)
Q Consensus 222 ~~~~~~~----------~~-~~~-~~~~~~~~~~~~~-~~~~~l-~~-~~~~~~~~~~~~~~~l~~~l~~~~g~-~~~~~ 285 (359)
++.+.+. .. ... ...+.....+... .++..+ +. ..+.+.++..++++++++.|+++ ++ ....+
T Consensus 237 ~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~~~ 315 (386)
T 3qm2_A 237 DLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS-DFYRNDVA 315 (386)
T ss_dssp GGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECCBC
T ss_pred HHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCC
Confidence 6532111 00 000 1112222222222 223333 33 46657778888999999999998 65 22111
Q ss_pred -Cccc-eEEEEEeccchHHHHHHHHHHHHhcCceeccCCC--cEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 286 -AVET-NIVYFEITEDSKLYAACLLKKLEEHGVLVMPESS--TRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 286 -~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~--~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
...+ ..+.|.++. .+.+ .++.+.|.++||.+..+.. +.+|++++..++++|++++++.|+++.++
T Consensus 316 ~~~rs~~iv~f~~~~-~~~~-~~~~~~L~~~gI~~~~g~~~~~~iRiS~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 316 QANRSRMNVPFQLAD-NTLD-KVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp GGGBCSSEEEEEESS-GGGH-HHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCceEEEEECCC-cccc-HHHHHHHHHCCCEEeCCCCCcCeEEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 1233 467788875 2345 6788889999999866532 46999999999999999999999988765
No 226
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.94 E-value=4.8e-24 Score=184.01 Aligned_cols=316 Identities=17% Similarity=0.122 Sum_probs=212.3
Q ss_pred HHHHHHHHHcCCCC--------CCccCCChHHHHHH----HHHHHHhCCCCe-----EEcCCchHHHHHHHHHhhhhcCC
Q 018243 17 TEAMRAAMASAEVD--------DDVLMHDPTAFRLE----TEMAKVMGKEAG-----LFVPSGTMGNLISVLVHCETRGS 79 (359)
Q Consensus 17 ~~~~~~a~~~~~~~--------~~~~~~~~~~~~l~----~~la~~~~~~~~-----~~~~~gt~a~~~~l~~~~~~~g~ 79 (359)
++.+.+++.....+ ..+|+.-+..+++| ++.+++||.+.. +-..||++|+..++.+++ +|||
T Consensus 67 S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All-~PGD 145 (490)
T 3ou5_A 67 SRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALL-QPHD 145 (490)
T ss_dssp CHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHC-C-CC
T ss_pred CHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHc-CCCC
Confidence 37788888764433 23466666666555 446788999874 778899999999999999 5999
Q ss_pred eEEecCCCcceeeccc-----cccccCCc--cceeeecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018243 80 EVILGDNSHIHIYENG-----GISTIGGV--HPRTVKNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 80 ~vl~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
+|+..+..|......+ ......|. +.+.++.+ +++.+|.+++++...+ .++++|++ ....+|
T Consensus 146 ~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~-------~kPklIi~-G~SaY~-- 215 (490)
T 3ou5_A 146 RIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARL-------FRPRLIIA-GTSAYA-- 215 (490)
T ss_dssp CEECBC----------------------------CBCEETTTTEECHHHHHHHHHH-------HCCSEEEE-CCSSCC--
T ss_pred EEEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhh-------cCCCeEEE-CCccCc--
Confidence 9998887776654422 11222332 33344433 5688999999999986 68999998 434333
Q ss_pred eecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCceeeEEecCH----------
Q 018243 152 RCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVGSVIVGSK---------- 221 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~gg~~~~~~---------- 221 (359)
..++ +++++++|++.|+++++|-+|..|... .+.-..++. .+|+++.|.||+|.+|.||+|++++
T Consensus 216 r~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA-~g~~psP~~-~ADvVTtTTHKTLrGPrGG~Il~~~~~~~~~~k~~ 290 (490)
T 3ou5_A 216 RLID---YARMREVCDEVKAHLLADMAHISGLVA-AKVIPSPFK-HADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTG 290 (490)
T ss_dssp SCCC---HHHHHHHHHHHTCEEEEECGGGHHHHH-TTSSCCGGG-TCSEEEEESSSTTCSCSCEEEEEECSEEEECC--C
T ss_pred cccC---HHHHHHHHhhcccEEEechhhhhhhhc-ccccCCccc-cceEEeccccccccCCCceEEEecccccccccccc
Confidence 3444 899999999999999999999776654 344344453 6999999999999999999888765
Q ss_pred -----HHHHHHHHHHHh-hCCCcchhHHHHHHH---HHHHHHhHHHHhhhHHHHHHHHHHHHhcCCCceEecCCccceEE
Q 018243 222 -----EFIKKARRLRKT-LGGGMRQVGVLCAAA---LVALQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIV 292 (359)
Q Consensus 222 -----~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~ 292 (359)
++.+++...... .-++. ....+++.+ ..++........++..+|++.|.+.|.+. |+.+.........+
T Consensus 291 ~~~~~~~~kkin~aVFPg~qggp-~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~-G~~vvsGgTdnHlv 368 (490)
T 3ou5_A 291 REIPYTFEDRINFAVFPSLQGGP-HNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHLV 368 (490)
T ss_dssp CEEECCCHHHHHHHHTTTTCSSC-CHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEE
T ss_pred chhHHHHHHHHHhhcCccccccc-hHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCCCceEE
Confidence 355555432211 11111 122222222 23343334448888999999999999999 99998777778888
Q ss_pred EEEeccchHHHHHHHHHHHHhcCcee----ccC-----CCcEEEEEe----CCCCCHHHHHHHHHHHHHHHH
Q 018243 293 YFEITEDSKLYAACLLKKLEEHGVLV----MPE-----SSTRVRIVV----HHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~l~~~gi~~----~~~-----~~~~lRi~~----~~~~~~~~i~~~~~~l~~~~~ 351 (359)
++.+.. .+.+..+..+.|.+.||.+ .|+ .+.+|||.. +.++.++|++++.+.|.+++.
T Consensus 369 LvDl~~-~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 369 LVDLRP-KGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp EEECGG-GTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred EEeccc-cCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 898876 4567888888999999987 343 345799964 456889999999999998875
No 227
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.94 E-value=3e-25 Score=210.54 Aligned_cols=308 Identities=16% Similarity=0.142 Sum_probs=210.6
Q ss_pred CCChHHHHHHHHHHHHhCCCCeEEcCCch-HHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCC
Q 018243 35 MHDPTAFRLETEMAKVMGKEAGLFVPSGT-MGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQD 113 (359)
Q Consensus 35 ~~~~~~~~l~~~la~~~~~~~~~~~~~gt-~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 113 (359)
.......++++.+++++|.+..+++++|+ +++..++.+++ ++||+|++++++|.+.+. + +...|++++.++...+
T Consensus 202 ~~~g~v~~~ee~la~l~G~d~~i~~~~Gtt~a~~~~i~al~-~~GD~Vlv~~~~h~s~~~-~--~~~~G~~~v~v~~~~~ 277 (755)
T 2vyc_A 202 DHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACM-TDNDVVVVDRNCHKSIEQ-G--LMLTGAKPVYMVPSRN 277 (755)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHC-CTTCEEEEESSCCHHHHH-H--HHHHCCEEEEECCCBC
T ss_pred cCccHHHHHHHHHHHHhCCCceEEECCcHHHHHHHHHHHhc-CCCCEEEECCCchHHHHH-H--HHHcCCEEEEEeCCCC
Confidence 34566789999999999999888788876 67888888887 599999999999999886 3 6677889988865432
Q ss_pred -----CCC-----CHHHHHHHhcCCCCC--ccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEeccccc
Q 018243 114 -----GTM-----DIDLIEAAIRDPKGE--IVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIF 181 (359)
Q Consensus 114 -----~~~-----~~~~l~~~l~~~~~~--~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~ 181 (359)
+.+ |+++|++++++.+.. ....++++++++++ ||+|.+.+ +++|.++|++||+++|+|++|+.
T Consensus 278 ~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p--n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~ 352 (755)
T 2vyc_A 278 RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC--TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYG 352 (755)
T ss_dssp TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS--CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCT
T ss_pred ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC--CCCceecC---HHHHHHHHHHcCCEEEEECcCch
Confidence 345 999999999742110 01123458888664 48999977 89999999999999999999854
Q ss_pred chhhhcCc--hhHhhhcC--ccE------EEEeccccCCCce-eeEEecCHH---H-HHHHHHHHHhhCCCcchhHHHHH
Q 018243 182 NAAVALGV--PVRRLVQA--ADS------ASVCLSKGLGAPV-GSVIVGSKE---F-IKKARRLRKTLGGGMRQVGVLCA 246 (359)
Q Consensus 182 ~~~~~~~~--~~~~~~~~--~d~------~~~s~~K~~g~~~-gg~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~ 246 (359)
+... .+. ....+ .+ +|+ ++.|+||+++++. ||+++.+++ + ...+.........+. ++....+
T Consensus 353 ~~~~-~~~~~~~~~~-~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~s-p~~~~ia 429 (755)
T 2vyc_A 353 YARF-NPIYADHYAM-RGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHATTS-PLYAICA 429 (755)
T ss_dssp TGGG-CGGGTTSSSS-CSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHHHTSCSS-CCHHHHH
T ss_pred hccc-CcccCCcchh-cCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHHHHhCCCC-HHHHHHH
Confidence 3222 111 11122 23 454 7779999998775 466665433 1 123332222222222 2333333
Q ss_pred HHHHHHH----HhHHHHhhhHHHHHHHHHHHHhcCCC---------ceEecCCc--------------------------
Q 018243 247 AALVALQ----ENVLVMLDGDHKKAKLLAEGLNQLKG---------LRVDVDAV-------------------------- 287 (359)
Q Consensus 247 ~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~~~~g---------~~~~~~~~-------------------------- 287 (359)
+...+++ ...+.+.++..++++++++.|+++++ +++..+..
T Consensus 430 al~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (755)
T 2vyc_A 430 SNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDC 509 (755)
T ss_dssp HHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGG
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhh
Confidence 3333443 21234777888888999999988766 55432210
Q ss_pred ----------------cc------eEEEEEeccc--------hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHH
Q 018243 288 ----------------ET------NIVYFEITED--------SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISAN 337 (359)
Q Consensus 288 ----------------~~------~~~~~~~~~~--------~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~ 337 (359)
.+ ..+.+.++.- .++++..+.+.|+++||.+...+...+|+.++.+.+++
T Consensus 510 ~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~~~~~v~~~~~~g~t~~ 589 (755)
T 2vyc_A 510 WVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLFSMGVTRG 589 (755)
T ss_dssp TBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEECSSEEEEECCTTCCTT
T ss_pred hccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeecCCCeEEEEECCCCCHH
Confidence 11 2345555420 13456899999988999987778889999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 018243 338 DVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 338 ~i~~~~~~l~~~~~~~~ 354 (359)
++++++++|.++.+.+.
T Consensus 590 ~~~~l~~al~~~~~~~~ 606 (755)
T 2vyc_A 590 KWGTLVNTLCSFKRHYD 606 (755)
T ss_dssp TTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 99999999999877653
No 228
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.94 E-value=1.5e-25 Score=195.25 Aligned_cols=315 Identities=13% Similarity=0.047 Sum_probs=209.1
Q ss_pred CCCCChHHHHHHHHHcCCCCCC-----c---cCC----ChHHHHHHHHHHHHhCCCC---eEEc-CCchHHHHHHHHHhh
Q 018243 11 DTVTKPTEAMRAAMASAEVDDD-----V---LMH----DPTAFRLETEMAKVMGKEA---GLFV-PSGTMGNLISVLVHC 74 (359)
Q Consensus 11 ~~~~~~~~~~~~a~~~~~~~~~-----~---~~~----~~~~~~l~~~la~~~~~~~---~~~~-~~gt~a~~~~l~~~~ 74 (359)
.+....+++|.++|.+...... . ... .....+.|+.+++++|.+. .+++ .|||+++..++..+.
T Consensus 19 at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~ 98 (377)
T 3e77_A 19 YFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLI 98 (377)
T ss_dssp ECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHG
T ss_pred cccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhcc
Confidence 3444555899999988654211 1 111 2345788899999999974 3553 689999999999988
Q ss_pred hh-cCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee
Q 018243 75 ET-RGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC 153 (359)
Q Consensus 75 ~~-~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~ 153 (359)
.. +||++++....|++... ...++..|..++.++.+.++..+++.++..++ +++++|.+.+ .+|.||..
T Consensus 99 ~~~~Gd~v~~~~~g~~~~~~-~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~--------~~t~lV~~~h-~et~tG~~ 168 (377)
T 3e77_A 99 GLKAGRCADYVVTGAWSAKA-AEEAKKFGTINIVHPKLGSYTKIPDPSTWNLN--------PDASYVYYCA-NETVHGVE 168 (377)
T ss_dssp GGSTTCEEEECCCSHHHHHH-HHHHTTTSEEEECSCCCSSSCSCCCGGGCCCC--------TTCSCEEEES-EETTTTEE
T ss_pred CCCCCCeEEEEECCHHHHHH-HHHHHHhCCceEEeccCCCcCCCCChHHhccC--------CCccEEEEeC-ccCchheE
Confidence 42 38898877766665422 13356678776666766566667777665555 7889998854 45588999
Q ss_pred cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHH----
Q 018243 154 LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKAR---- 228 (359)
Q Consensus 154 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~---- 228 (359)
.|. +|+++|+++++|.++++|..+ ..... .+++++|.+|++| |.| |+++.++++.+.+.
T Consensus 169 ~pi--------i~~~~~~~~~vD~~q~~g~~~---id~~~----~~~~~~s~~K~~g-p~G~g~l~~~~~~l~~~~~~~p 232 (377)
T 3e77_A 169 FDF--------IPDVKGAVLVCDMSSNFLSKP---VDVSK----FGVIFAGAQKNVG-SAGVTVVIVRDDLLGFALRECP 232 (377)
T ss_dssp CSS--------CCCCTTCCEEEECTTTTTSSC---CCGGG----CSEEEEEGGGTTS-CTTCEEEEEETTSCSCCCTTSC
T ss_pred chh--------hhccCCCEEEEEcccccCCCC---Cchhh----cCEEEEecccccC-CCccEEEEEcHHHHhhccCCCC
Confidence 884 367899999999998776553 22322 3467889999997 777 88887665532211
Q ss_pred ------HHH-HhhCCCc-chhHHHHH-HHHHHH-HH-hHHHHhhhHHHHHHHHHHHHhcCCCceEecC--Cccce-EEEE
Q 018243 229 ------RLR-KTLGGGM-RQVGVLCA-AALVAL-QE-NVLVMLDGDHKKAKLLAEGLNQLKGLRVDVD--AVETN-IVYF 294 (359)
Q Consensus 229 ------~~~-~~~~~~~-~~~~~~~~-~~~~~l-~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~--~~~~~-~~~~ 294 (359)
... .....++ ....+... .++..+ +. ..+.+.++..++++++++.|+++||+.+... ...++ .+.|
T Consensus 233 ~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf 312 (377)
T 3e77_A 233 SVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPF 312 (377)
T ss_dssp GGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEE
T ss_pred chhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEE
Confidence 111 1111122 11222211 122223 23 4565777888999999999999988875321 12333 5778
Q ss_pred Eeccc---hHHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 295 EITED---SKLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 295 ~~~~~---~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
.++.- ...+ ..+.+.|.++||.+.++. .+.+|++++..++++|++.+++.|++++++
T Consensus 313 ~~~~~~~~~~~~-~~~l~~l~~~Gi~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 313 RIGNAKGDDALE-KRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp EESSTTCCHHHH-HHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCCchhHH-HHHHHHHHHCCcEEeCCCCcCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 88751 1112 467788888999986652 256999999999999999999999988765
No 229
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.93 E-value=2.2e-24 Score=187.45 Aligned_cols=315 Identities=13% Similarity=0.122 Sum_probs=207.4
Q ss_pred cccccccCCCCCChHHHHHHHHHcCCCCCC-----cc--C-----CChHHHHHHHHHHHHhCCCC---eEE-cCCchHHH
Q 018243 3 TRTVDLRSDTVTKPTEAMRAAMASAEVDDD-----VL--M-----HDPTAFRLETEMAKVMGKEA---GLF-VPSGTMGN 66 (359)
Q Consensus 3 ~~~id~~~~~~~~~~~~~~~a~~~~~~~~~-----~~--~-----~~~~~~~l~~~la~~~~~~~---~~~-~~~gt~a~ 66 (359)
++.+.|..+.... +++++++|.+...... .+ + ......+.|+.++++++.+. .++ ++|||+++
T Consensus 4 ~~~~~f~pgpt~~-~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~ 82 (361)
T 3m5u_A 4 MRKINFSAGPSTL-PLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQF 82 (361)
T ss_dssp CCCEECCSSSCCC-CHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred cceEeecCCCCCC-cHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHH
Confidence 3556676655444 4888999887554211 11 0 12456788899999999852 355 77889999
Q ss_pred HHHHHHhhhhcCCeEE-ecCCCcceeeccccccccCCccceeeecCCCCC--CCHHHHHHHhcCCCCCccCCceeEEEEe
Q 018243 67 LISVLVHCETRGSEVI-LGDNSHIHIYENGGISTIGGVHPRTVKNNQDGT--MDIDLIEAAIRDPKGEIVYPTTRLICLE 143 (359)
Q Consensus 67 ~~~l~~~~~~~g~~vl-~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~--~~~~~l~~~l~~~~~~~~~~~~~~v~i~ 143 (359)
..++..+. +++++. +.... ++... ...++..|+++..++.+.++. ++++. + |+ +++++|.+.
T Consensus 83 n~~~~~~~--~~~~~~~i~~~~-~~~~~-~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~--------~~t~lv~~~ 147 (361)
T 3m5u_A 83 AMIPMNLA--LNGVCEYANTGV-WTKKA-IKEAQILGVNVKTVASSEESNFDHIPRV--E-FS--------DNADYAYIC 147 (361)
T ss_dssp HHHHHHHC--CSSCEEEEECSH-HHHHH-HHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CC--------TTSSEEEEE
T ss_pred HHHHHhcC--CCCeEEEEeCCH-HHHHH-HHHHHHcCCceEEEecccCcCCCcCChh--h-cC--------CCCCEEEEe
Confidence 99999887 566542 22222 22211 123556788888888777664 45555 3 66 788999885
Q ss_pred ccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHH
Q 018243 144 NTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKE 222 (359)
Q Consensus 144 ~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~ 222 (359)
+ .+|.||...+. + ++ +|+++++|.+|++|..+ .... ..|++++|.||++| |.| |+++.+++
T Consensus 148 ~-~e~~tG~~~~~--i------~~-~~~~~~vD~~q~~g~~~---id~~----~~d~~~~s~~K~~g-p~G~g~l~~~~~ 209 (361)
T 3m5u_A 148 S-NNTIYGTQYQN--Y------PK-TKTPLIVDASSDFFSRK---VDFS----NIALFYGGVQKNAG-ISGLSCIFIRKD 209 (361)
T ss_dssp S-EETTTTEECSS--C------CC-CSSCEEEECGGGTTSSC---CCCT----TEEEEEEETTTTSS-CTTCEEEEEEHH
T ss_pred C-CCCCcceeCCc--c------cc-cCCEEEEEcccccCCCC---CCcc----cCCEEEEechhccC-CCccEEEEEcHH
Confidence 4 45578998662 2 22 49999999999776553 1221 36899999999997 777 99999988
Q ss_pred HHHHHHH--------HHH----hhC-CCcchhHHHHH-HHHHHHH-H-hHHHHhhhHHHHHHHHHHHHhcCCCc-eEecC
Q 018243 223 FIKKARR--------LRK----TLG-GGMRQVGVLCA-AALVALQ-E-NVLVMLDGDHKKAKLLAEGLNQLKGL-RVDVD 285 (359)
Q Consensus 223 ~~~~~~~--------~~~----~~~-~~~~~~~~~~~-~~~~~l~-~-~~~~~~~~~~~~~~~l~~~l~~~~g~-~~~~~ 285 (359)
+.+.+.. +.. ... ++.....+... .++..+. . ..+.+.++..++++++++.|++++++ ....+
T Consensus 210 ~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~ 289 (361)
T 3m5u_A 210 MLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHAD 289 (361)
T ss_dssp HHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSC
T ss_pred HHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCC
Confidence 8776542 111 111 11111122111 1122222 3 36657778888999999999999666 54322
Q ss_pred C-cc-ceEEEEEeccchHHHHHHHHHHHHhcCceeccCCC--cEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q 018243 286 A-VE-TNIVYFEITEDSKLYAACLLKKLEEHGVLVMPESS--TRVRIVVHHQISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 286 ~-~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~--~~lRi~~~~~~~~~~i~~~~~~l~~~~~~ 352 (359)
+ .. ..++.|.++...+.+ .++...|.++||.+..+.. +.+|++++..++++|++.+++.|+++.++
T Consensus 290 ~~~rs~~ivsf~~~~~~~~~-~~~~~~L~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 290 KKDRSLMNVSFNIAKNKDLE-PLFVKEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp GGGBCSSEEEEEESSCTTHH-HHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCeEEEEECCCchhhh-HHHHHHHHHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence 2 12 346778877411234 4788899999999866532 46999999999999999999999988765
No 230
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.93 E-value=8.4e-25 Score=203.84 Aligned_cols=307 Identities=15% Similarity=0.127 Sum_probs=209.8
Q ss_pred CccCCChHHHHHHHHHHHHhCCCCeEEcCCch-HHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeec
Q 018243 32 DVLMHDPTAFRLETEMAKVMGKEAGLFVPSGT-MGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN 110 (359)
Q Consensus 32 ~~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt-~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 110 (359)
+...+.....++++.+|++||.+.+++++||+ .|+..++.+++ ++||+|++++++|.+.+. + ..+.|+++++++.
T Consensus 189 ~L~~~~g~i~eaE~~lA~~fGa~~a~~v~nGts~An~~ai~al~-~pGD~VLv~r~~H~S~~~-~--l~lsGa~pv~v~~ 264 (715)
T 3n75_A 189 SLLDHSGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSA-PAGSTILIDRNCHKSLTH-L--MMMSDVTPIYFRP 264 (715)
T ss_dssp BTTTTBTHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHC-CTTCEEEEESSCCHHHHH-H--HHHSCCEEEEECC
T ss_pred CCCCCcHHHHHHHHHHHHHhCCCCceEECcHHHHHHHHHHHHhC-CCCCEEEECCCccHHHHH-H--HHHcCCEEEEEec
Confidence 34455677899999999999999999888885 78888888888 599999999999999886 4 6788999998864
Q ss_pred CC-CCC----C-----CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccc
Q 018243 111 NQ-DGT----M-----DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARI 180 (359)
Q Consensus 111 ~~-~~~----~-----~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~ 180 (359)
.. ++. + |+++|+++++++++. ..+++++++++ |++|.+++ +++|.++|++++ +++|+||+
T Consensus 265 ~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~---k~p~~vivt~p--n~~G~v~d---l~~I~ela~~~~--livDEAH~ 334 (715)
T 3n75_A 265 TRNAYGILGGIPQSEFQHATIAKRVKETPNA---TWPVHAVITNS--TYDGLLYN---TDFIKKTLDVKS--IHFDSAWV 334 (715)
T ss_dssp CBCTTCCBCCCCGGGGSHHHHHHHHHHSTTC---CSCSEEEEESS--CTTSEEEC---HHHHHHHCCCSE--EEEECTTC
T ss_pred cccccccccCcccccCCHHHHHHHHhhCcCc---cCceEEEEECC--CCCCccCC---HHHHHHHhCcCc--EEEccccc
Confidence 32 232 3 899999999853110 12347777666 59999998 788888887663 79999987
Q ss_pred cchhhhcCch-hHhhhc--CccEE---EEeccccCCCc-eeeEEecCHHH-HHHHHHHHHhhCCCcchhHHHHHHHHHHH
Q 018243 181 FNAAVALGVP-VRRLVQ--AADSA---SVCLSKGLGAP-VGSVIVGSKEF-IKKARRLRKTLGGGMRQVGVLCAAALVAL 252 (359)
Q Consensus 181 ~~~~~~~~~~-~~~~~~--~~d~~---~~s~~K~~g~~-~gg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (359)
.+........ ...+.. .+|++ +.|+||+++++ .||++..++++ .+.++....... +++++....++...++
T Consensus 335 ~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~~~~~~~~~~~~-STSpsy~~~AsldaA~ 413 (715)
T 3n75_A 335 PYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHT-TTSPHYGIVASTETAA 413 (715)
T ss_dssp TTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCHHHHHHHHHHTS-CSSCCHHHHHHHHHHH
T ss_pred cccccCCccccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhhHHHHHHHHHhhc-CCCchHHHHHHHHHHH
Confidence 5542211111 112221 26755 67999999886 45777765442 223333333333 3444555555555555
Q ss_pred HH----hHHHHhhhHHHHHHHHHHHHhcCCC------ceEecCCc----------------------------cceEEEE
Q 018243 253 QE----NVLVMLDGDHKKAKLLAEGLNQLKG------LRVDVDAV----------------------------ETNIVYF 294 (359)
Q Consensus 253 ~~----~~~~~~~~~~~~~~~l~~~l~~~~g------~~~~~~~~----------------------------~~~~~~~ 294 (359)
+. .-++++++..++++++++.|+++++ +.++.+.. ...-+.+
T Consensus 414 ~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i 493 (715)
T 3n75_A 414 AMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTL 493 (715)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEE
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEE
Confidence 22 2223778888899999999887643 33322110 0111444
Q ss_pred Eeccc--------hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 295 EITED--------SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 295 ~~~~~--------~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
.++.- .|+.+..+.+.|+++||.+...+...+-+-++.+.+++++++++++|.++-+.+
T Consensus 494 ~~~~~~~~G~~~~~Gi~g~~~~~~L~~~~I~~E~~d~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~~ 560 (715)
T 3n75_A 494 LTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKRAF 560 (715)
T ss_dssp ECSCBCTTSCBCSSCCCHHHHHHHHHHTTCCCSEEETTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCCCCccccCCCcHHHHHHHHHHCCCEEEecCCCcEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 44321 145678899999999999988788888888888999999999999998876544
No 231
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.88 E-value=7.9e-28 Score=215.68 Aligned_cols=331 Identities=14% Similarity=0.088 Sum_probs=222.6
Q ss_pred cccccccCCCC----CChHHHHHHHHHcCCCCCCcc-CCChHHHHHHHHHHHHh-CCCCeEEcCCchHHHHHHHHHhhh-
Q 018243 3 TRTVDLRSDTV----TKPTEAMRAAMASAEVDDDVL-MHDPTAFRLETEMAKVM-GKEAGLFVPSGTMGNLISVLVHCE- 75 (359)
Q Consensus 3 ~~~id~~~~~~----~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~l~~~la~~~-~~~~~~~~~~gt~a~~~~l~~~~~- 75 (359)
.++|||.++.. ...+|.+.+++.+.......+ ...+...++++.|++++ +.+.+++++||++|+..++..+..
T Consensus 100 ~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~~~~~~~~Lae~L~~~~p~~~~v~~~nSGseA~~~Aik~ar~~ 179 (465)
T 2yky_A 100 HAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLSTQTENEALFAEAVCDRFPSIDLVRFTNSGTEANLMALATATAI 179 (465)
Confidence 35799988754 234599999998866543222 24577789999999999 666778999999999999988643
Q ss_pred hcCCeEEecCCCcceeecccccc--ccCCc--cceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc
Q 018243 76 TRGSEVILGDNSHIHIYENGGIS--TIGGV--HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG 151 (359)
Q Consensus 76 ~~g~~vl~~~~~~~~~~~~~~~~--~~~g~--~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG 151 (359)
..+++|++.+++|..... +... ...|+ .++.++.+ |++.|++.+++.. +++++|++++.++| +|
T Consensus 180 tgr~~ii~~~~~yHG~~~-~~~sg~~~~g~~~~~~~~~~~-----d~~~l~~~l~~~~-----~~~aavi~epv~~~-~G 247 (465)
T 2yky_A 180 TGRKTVLAFDGGYHGGLL-NFASGHAPTNAPYHVVLGVYN-----DVEGTADLLKRHG-----HDCAAILVEPMLGA-GG 247 (465)
Confidence 244778887777644332 1110 11233 23333433 7889998887421 46889999877664 78
Q ss_pred ee-cChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCCCcee-eEEecCHHHHHHHHH
Q 018243 152 RC-LSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKKARR 229 (359)
Q Consensus 152 ~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~~~~ 229 (359)
.. .+.+++++|+++|++||+++|+||+|. +... .......+...+|++ +++|++|++.. |++++++++++.+..
T Consensus 248 ~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g-~~~a~~~~gv~pDi~--t~sK~lg~G~piG~v~~~~~i~~~l~~ 323 (465)
T 2yky_A 248 CVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLS-GGGAQEMLGISADLT--TLGKYIGGGMSFGAFGGRRDLMERFDP 323 (465)
Confidence 54 567999999999999999999999987 4211 111111111134543 78899986333 788899999888765
Q ss_pred --HH-HhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcCC---CceEecCCccceEEEEEeccch--
Q 018243 230 --LR-KTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQLK---GLRVDVDAVETNIVYFEITEDS-- 300 (359)
Q Consensus 230 --~~-~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~-- 300 (359)
.. ...+.++..+++.++++..+++...+ ...++..++.+++++.|+++. ++... .+..+.++++.+..+.
T Consensus 324 ~~~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-v~g~G~~~~i~~~~~~~~ 402 (465)
T 2yky_A 324 ARDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLNRIAVENQAPLQ-FTGLGSLGTIHFSRAPIR 402 (465)
Confidence 12 12445556677777777777754322 356677777888888887651 22111 2346777887765310
Q ss_pred ---------HHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 301 ---------KLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 301 ---------~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
......+.+.|.++||.+.|.+... ++..++++++++++++|+++++++.
T Consensus 403 ~~~~~~~~d~~~~~~~~~~ll~~GV~v~p~~~~~----~s~~~t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 403 SAGDVRAADQQLKELFFFHMLRKGIYLAPRGMYA----LSLEIADAGRDAFAEALADFIGEQR 461 (465)
Confidence 0125678889999999998765332 4447999999999999999998764
No 232
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.93 E-value=3.3e-23 Score=182.35 Aligned_cols=307 Identities=15% Similarity=0.139 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHhCCCCe---EEcCCchHHHHHHHHHhhhh---cCCeEEecCCCcceeeccccccccCCccceeeec--
Q 018243 39 TAFRLETEMAKVMGKEAG---LFVPSGTMGNLISVLVHCET---RGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN-- 110 (359)
Q Consensus 39 ~~~~l~~~la~~~~~~~~---~~~~~gt~a~~~~l~~~~~~---~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~-- 110 (359)
....+...+.+++|.+.+ ++++++|.++.+++.+++.. +++.|++++.+|.+.++ + +.+.|+.++.++.
T Consensus 99 ~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~k-A--l~l~Gl~p~~v~~~~ 175 (450)
T 3bc8_A 99 ITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFK-S--MVTAGFEPVVIENVL 175 (450)
T ss_dssp HHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHH-H--HHHTTCEEEEECCEE
T ss_pred HHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHH-H--HHHcCCeeEEEEeee
Confidence 345666777788898865 67777764555555544421 27889999999999987 4 7788998888843
Q ss_pred -CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc
Q 018243 111 -NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV 189 (359)
Q Consensus 111 -~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 189 (359)
++.+.+|++.|+++|++++ .+..++++.++.++.+|.+- ++++|+++|++||+++|||+||+.........
T Consensus 176 ~~~~~~id~~~le~aI~~~~-----~~~~~~Vv~t~t~~g~g~~d---dl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l 247 (450)
T 3bc8_A 176 EGDELRTDLKAVEAKIQELG-----PEHILCLHSTTACFAPRVPD---RLEELAVICANYDIPHVVNNAYGLQSSKCMHL 247 (450)
T ss_dssp ETTEEECCHHHHHHHHHHHC-----GGGEEEEEEESSCCTTBCCC---CHHHHHHHHHHHTCCEEEECTTTTTCHHHHHH
T ss_pred cCccCCcCHHHHHHHHHhcC-----CCCEEEEEEECCcCCCceec---CHHHHHHHHHHCCCeEEEECCCchhhhhhHhH
Confidence 4568899999999998531 12334444355554444543 59999999999999999999964322221111
Q ss_pred hhHhhh-cCccEEEEeccccCCCcee-eEEec-CHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHH-HHhHHHHhhhHHH
Q 018243 190 PVRRLV-QAADSASVCLSKGLGAPVG-SVIVG-SKEFIKKARRLRKTLGGGMRQVGVLCAAALVAL-QENVLVMLDGDHK 265 (359)
Q Consensus 190 ~~~~~~-~~~d~~~~s~~K~~g~~~g-g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~ 265 (359)
....+. .++|+++.|.||+++.|.+ +++.. +++..+++... +.+..+..+.+..+..+..+ .+...+..++..+
T Consensus 248 ~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~~~--~~g~~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~ 325 (450)
T 3bc8_A 248 IQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKM--YPGRASASPSLDVLITLLSLGCSGYRKLLKERKE 325 (450)
T ss_dssp HHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHHHH--SCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHHHHH--hhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111222 3799999999999999977 55554 77776665332 21222222233333333333 2233345666788
Q ss_pred HHHHHHHHHhcCC---CceEecCCccceEEEEEecc---chHHHHHHHHHHHHhcC------------------------
Q 018243 266 KAKLLAEGLNQLK---GLRVDVDAVETNIVYFEITE---DSKLYAACLLKKLEEHG------------------------ 315 (359)
Q Consensus 266 ~~~~l~~~l~~~~---g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~g------------------------ 315 (359)
+++++++.|++++ +..+...+..+.-..+.+.. ....+..++.-.+...|
T Consensus 326 ~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~g 405 (450)
T 3bc8_A 326 MFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFM 405 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTT
T ss_pred HHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEecCCCCccceeeecccccchhHHHHHHcC
Confidence 8899999998876 77664332111122232321 00125556666665444
Q ss_pred ceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhhcC
Q 018243 316 VLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCEENG 358 (359)
Q Consensus 316 i~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~ 358 (359)
|.+...+...+-+.++.+.+++++++++++|+++.+++++++.
T Consensus 406 i~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~~~~ 448 (450)
T 3bc8_A 406 SHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKEQT 448 (450)
T ss_dssp TTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhc
Confidence 2222334566888888899999999999999999988877654
No 233
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.92 E-value=1.3e-22 Score=176.04 Aligned_cols=294 Identities=15% Similarity=0.166 Sum_probs=190.6
Q ss_pred HhCCCCe---EEcCCchHHHHHHHHHhhhh---cCCeEEecCCCcceeeccccccccCCccceeeec---CCCCCCCHHH
Q 018243 50 VMGKEAG---LFVPSGTMGNLISVLVHCET---RGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN---NQDGTMDIDL 120 (359)
Q Consensus 50 ~~~~~~~---~~~~~gt~a~~~~l~~~~~~---~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~~~~~~ 120 (359)
.+|.+.+ ++++++|.++.+.+++.+.. .+++|++++.+|.+.++ + ..+.|+++++++. ++...+|++.
T Consensus 128 ~~G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~k-A--liL~Gl~Pv~V~p~~d~~~~~id~e~ 204 (501)
T 3hl2_A 128 LAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFK-S--MITAGFEPVVIENVLEGDELRTDLKA 204 (501)
T ss_dssp HTTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHH-H--HHHTTCEEEEECEEEETTEEEECHHH
T ss_pred HcCCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHH-H--HHHcCCeEEEEeeeecccccCCCHHH
Confidence 3487754 45555555666666666642 24899999999999998 4 7788999999854 3457789999
Q ss_pred HHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcC-cc
Q 018243 121 IEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQA-AD 199 (359)
Q Consensus 121 l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~d 199 (359)
++++|+++. .+..++++.+++.+..+.+ +++++|+++|++||++++||+||+....+....+...+..+ +|
T Consensus 205 le~aI~e~g-----a~~i~~V~~Ttt~y~p~~~---ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD 276 (501)
T 3hl2_A 205 VEAKVQELG-----PDCILCIHSTTSCFAPRVP---DRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRID 276 (501)
T ss_dssp HHHHHHHHC-----GGGEEEEEEECSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHhcC-----CCcEEEEEecCCCCCCccc---ccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCc
Confidence 999998631 1333333334444322333 35999999999999999999997543322222222223335 99
Q ss_pred EEEEeccccCCCceeeEEe--cCHHHHHHHHHHHHhhCCCcchhHHH-HHHHHHHH-HHhHHHHhhhHHHHHHHHHHHHh
Q 018243 200 SASVCLSKGLGAPVGSVIV--GSKEFIKKARRLRKTLGGGMRQVGVL-CAAALVAL-QENVLVMLDGDHKKAKLLAEGLN 275 (359)
Q Consensus 200 ~~~~s~~K~~g~~~gg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~ 275 (359)
+++.|.||++-.|.||.++ .++++++++ ...+-++.+.++.+ ..+.+..+ .+...+.+++..+++++|++.|+
T Consensus 277 ~vVqS~HK~llvpIGG~ii~~~d~e~l~~~---~~~yPGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~ 353 (501)
T 3hl2_A 277 AFVQSLDKNFMVPVGGAIIAGFNDSFIQEI---SKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIK 353 (501)
T ss_dssp EEEEEHHHHHCCCSSCEEEEESCHHHHHHH---HHTSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecccccceeecCceEEEeCCHHHHHHH---HHhCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999889875343 367777765 33332222333333 33333333 33344588888899999999998
Q ss_pred cCC---CceEecCCccceEEEEEeccc---hHHHHHHHHHHHHhcCce---eccCC---------------------CcE
Q 018243 276 QLK---GLRVDVDAVETNIVYFEITED---SKLYAACLLKKLEEHGVL---VMPES---------------------STR 325 (359)
Q Consensus 276 ~~~---g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~gi~---~~~~~---------------------~~~ 325 (359)
++. |-++...+...-.+.+.+... .+....++-..|..++|- +++.+ ..+
T Consensus 354 ~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~y 433 (501)
T 3hl2_A 354 KLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAY 433 (501)
T ss_dssp HHHHTTTCCBCCCTTCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSCE
T ss_pred HHHHhcChhhcCCCCCceeEEEecccccccccccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCcccCCCCCCchH
Confidence 852 444432221222244555431 112466888888777663 33321 235
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHHHHHhhc
Q 018243 326 VRIVVHHQISANDVHYTLSCFQKIYAGVCEEN 357 (359)
Q Consensus 326 lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 357 (359)
+-++...+++++|++.++++|+++++++.++.
T Consensus 434 l~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~~ 465 (501)
T 3hl2_A 434 LNAASAIGMKMQDVDLFIKRLDRCLKAVRKER 465 (501)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 78888889999999999999999999987654
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.92 E-value=3.7e-23 Score=185.01 Aligned_cols=341 Identities=17% Similarity=0.148 Sum_probs=212.5
Q ss_pred ccccccCC----CCCChHHHHHHHHHcCCCC--C--CccCCChHHHHHHHHHHHHhCCC---CeEEcCCchHHHHHHHHH
Q 018243 4 RTVDLRSD----TVTKPTEAMRAAMASAEVD--D--DVLMHDPTAFRLETEMAKVMGKE---AGLFVPSGTMGNLISVLV 72 (359)
Q Consensus 4 ~~id~~~~----~~~~~~~~~~~a~~~~~~~--~--~~~~~~~~~~~l~~~la~~~~~~---~~~~~~~gt~a~~~~l~~ 72 (359)
++|||.++ +....+|++.+++.+.... + ..+...+...++.+.+++++..+ ..++++||++|+..+++.
T Consensus 65 ~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~Alkl 144 (456)
T 4atq_A 65 SFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKV 144 (456)
T ss_dssp EEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHH
T ss_pred EEEEccccHHHHhcCCCCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHH
Confidence 57888776 3445568888888764322 1 12233566678888999988643 457889999999999998
Q ss_pred hhhhcC-CeEEecCC-CcceeeccccccccCC-------------ccceeeecCC-----CCC-CCHHHHHHHhcCCCCC
Q 018243 73 HCETRG-SEVILGDN-SHIHIYENGGISTIGG-------------VHPRTVKNNQ-----DGT-MDIDLIEAAIRDPKGE 131 (359)
Q Consensus 73 ~~~~~g-~~vl~~~~-~~~~~~~~~~~~~~~g-------------~~~~~v~~~~-----~~~-~~~~~l~~~l~~~~~~ 131 (359)
+....+ .+|+.... +|..+.. + ....+ ..+..++.+. ... -+.+.+++.++.....
T Consensus 145 Ar~~t~r~~ii~~~~~yHG~t~~--a-ls~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 221 (456)
T 4atq_A 145 ARLATGRDAVVAFDHAYHGRTNL--T-MALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQ 221 (456)
T ss_dssp HHHHHCCCEEEEETTCCCCSSHH--H-HHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHH
T ss_pred HhhhhcCCeEEEEecccCCcccc--c-cccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHh
Confidence 875444 35665444 4443321 1 11111 1122232211 111 1233333333211000
Q ss_pred ccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEEeccccCC
Q 018243 132 IVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASVCLSKGLG 210 (359)
Q Consensus 132 ~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~~g 210 (359)
.+..++.+|++++...+ +|. ..+.+++++++++|++||+++|+||++..............+.-.+|+++++ |.+|
T Consensus 222 ~~~~~iAAvivEPiqg~-gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~g--K~lg 298 (456)
T 4atq_A 222 IGGDQVAAIIIEPIQGE-GGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMA--KGIA 298 (456)
T ss_dssp TCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEEC--GGGG
T ss_pred hcCCceEEEEeccccCC-CCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhhh--hccc
Confidence 11157999999999885 455 5667999999999999999999999985433321111222233367877665 5554
Q ss_pred --CceeeEEecCHHHHHHHHHHHHhhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHHHHHHHhcC----CC--ce
Q 018243 211 --APVGSVIVGSKEFIKKARRLRKTLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKLLAEGLNQL----KG--LR 281 (359)
Q Consensus 211 --~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~l~~~----~g--~~ 281 (359)
.|. |.+++++++.+.+.. ...+.|+..+++.++++...++...+ +..++..+..+++.+.|+++ +. -.
T Consensus 299 gg~P~-~av~~~~~i~~~~~~--~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~ 375 (456)
T 4atq_A 299 GGLPL-SAITGRADLLDAVHP--GGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAGGGS 375 (456)
T ss_dssp TTSSC-EEEEEEHHHHTTSCT--TSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred CcCCc-eeeEecHHHHhcccc--cCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccccCC
Confidence 344 446677777766532 23567777788888899888876544 24455556666666666543 21 01
Q ss_pred Ee-cCCccceEEEEEeccc-----hHHHHHHHHHHHHhcCceeccCC--CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 282 VD-VDAVETNIVYFEITED-----SKLYAACLLKKLEEHGVLVMPES--STRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 282 ~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
+. .-...+.++.+.+..+ .......+.+.+.++|+.+.+.+ .+.||+.++..++++++++++++|+++++..
T Consensus 376 ~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~~~~~irl~PpL~it~~~id~~l~~l~~al~a~ 455 (456)
T 4atq_A 376 VVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTCGTYGNVIRLLPPLVISDELLIDGLEVLAAAIKAH 455 (456)
T ss_dssp CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred ceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 11 0123566666766431 12346688999999999987654 4689999999999999999999999998753
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.92 E-value=3.5e-22 Score=179.32 Aligned_cols=340 Identities=15% Similarity=0.074 Sum_probs=218.9
Q ss_pred cccccccCCC----CCChHHHHHHHHHcCCCCC----CccC-CChHHHHHHHHHHHHhCC--CCeEEcCCchHHHHHHHH
Q 018243 3 TRTVDLRSDT----VTKPTEAMRAAMASAEVDD----DVLM-HDPTAFRLETEMAKVMGK--EAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 3 ~~~id~~~~~----~~~~~~~~~~a~~~~~~~~----~~~~-~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~l~ 71 (359)
.++|||.++. ....+|++.+++.+..... ..++ ..+...+|.+.|++..+. +.+.+++||++|+..+++
T Consensus 67 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e~AiK 146 (473)
T 4e3q_A 67 RRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFPGYHAFFGRMSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEANDTMVK 146 (473)
T ss_dssp CEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCCCCCCCTTEEEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHHHHHHH
T ss_pred CEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcccccccccccCHHHHHHHHHHHhhCCCCccEEEEeCchHHHHHHHHH
Confidence 3678998863 2344588888887644321 1222 245667888889998864 457899999999999999
Q ss_pred Hhhh------hcC-CeEEecCC-CcceeeccccccccCCc-----------cceeeecC------CCCCC-------CHH
Q 018243 72 VHCE------TRG-SEVILGDN-SHIHIYENGGISTIGGV-----------HPRTVKNN------QDGTM-------DID 119 (359)
Q Consensus 72 ~~~~------~~g-~~vl~~~~-~~~~~~~~~~~~~~~g~-----------~~~~v~~~------~~~~~-------~~~ 119 (359)
.+.. +++ .+|+.... +|..+.. + ....+. ....++.+ ..+.. ..+
T Consensus 147 lAr~~~~~~g~~~r~~ii~~~~~yHG~t~~--a-~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 223 (473)
T 4e3q_A 147 MLWFLHAAEGKPQKRKILTRWNAYHGVTAV--S-ASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLAR 223 (473)
T ss_dssp HHHHHHHHTTCTTCCEEEEETTCCCCSSHH--H-HHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCcceEEEeeceECCCccc--c-ccccccccccccCCCCCcccccCCCcccccccccchhhHHHHHHHH
Confidence 8753 122 34664444 4443321 1 111111 11112111 11111 123
Q ss_pred HHHHHhcCCCCCccCCceeEEEEeccccCCCce-ecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCc
Q 018243 120 LIEAAIRDPKGEIVYPTTRLICLENTHANCGGR-CLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAA 198 (359)
Q Consensus 120 ~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~ 198 (359)
++++.+.+. +..++.+|++++...+ +|+ ..+.+++++++++|++||+++|+||++..............+.-.+
T Consensus 224 ~l~~~i~~~----~~~~iAavi~EPiqg~-gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~P 298 (473)
T 4e3q_A 224 ELEETIQRE----GADTIAGFFAEPVMGA-GGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTP 298 (473)
T ss_dssp HHHHHHHHH----CGGGEEEEEECSSBST-TTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCC
T ss_pred HHHHHHHhh----CCCceEEEEeCCccCC-CCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCC
Confidence 455555421 1157889999998885 455 4666999999999999999999999975433321212222233357
Q ss_pred cEEEEeccccCCC---ceeeEEecCHHHHHHHHHHHH-----hhCCCcchhHHHHHHHHHHHHHhHH-HHhhhHHHHHHH
Q 018243 199 DSASVCLSKGLGA---PVGSVIVGSKEFIKKARRLRK-----TLGGGMRQVGVLCAAALVALQENVL-VMLDGDHKKAKL 269 (359)
Q Consensus 199 d~~~~s~~K~~g~---~~gg~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~ 269 (359)
|++++ +|.+++ |. |.+++++++.+.+..... ..+.++..+++.+++++..++...+ ...++..+..++
T Consensus 299 Di~t~--~K~l~gG~~Pl-~av~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~ 375 (473)
T 4e3q_A 299 DAIIS--SKNLTAGFFPM-GAVILGPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPR 375 (473)
T ss_dssp SEEEE--CGGGGTTSSCC-EEEEECHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHH
T ss_pred ChHHh--cccccCCCCCc-ccccccHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHH
Confidence 76654 577743 33 557788898888754322 2467777788888888888876554 345566677777
Q ss_pred HHHHHhcC---CCceEecCCccceEEEEEeccc---------hHHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHH
Q 018243 270 LAEGLNQL---KGLRVDVDAVETNIVYFEITED---------SKLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISAN 337 (359)
Q Consensus 270 l~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~ 337 (359)
|++.|+++ |.+.-. ...+.++-+.+..+ .......+.+.+.++|+.+.+.+ +.+|++++..++++
T Consensus 376 l~~~L~~l~~~~~v~~v--RG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-~~i~l~PPL~it~~ 452 (473)
T 4e3q_A 376 FEERLKHIAERPNIGEY--RGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPLG-QSVVLCPPFILTEA 452 (473)
T ss_dssp HHHHHHHHTTSTTEEEE--EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEET-TEEEECCCTTCCHH
T ss_pred HHHHHHHHhcCCCeeEE--eecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEecC-CEEEEeCCCCCCHH
Confidence 87777664 444321 23555666665321 01235678899999999998775 68999999899999
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 018243 338 DVHYTLSCFQKIYAGVCEE 356 (359)
Q Consensus 338 ~i~~~~~~l~~~~~~~~~~ 356 (359)
++|+++++|+++++++..+
T Consensus 453 eid~~~~~l~~al~~v~ae 471 (473)
T 4e3q_A 453 QMDEMFDKLEKALDKVFAE 471 (473)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988664
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.89 E-value=5.9e-22 Score=189.31 Aligned_cols=339 Identities=15% Similarity=0.134 Sum_probs=213.4
Q ss_pred ccccccCC----CCCCh-HHHHHHHHHcCCCC--CCcc--CCChHHHHHHHHHHHHhC---CCCeEEcCCchHHHHHHHH
Q 018243 4 RTVDLRSD----TVTKP-TEAMRAAMASAEVD--DDVL--MHDPTAFRLETEMAKVMG---KEAGLFVPSGTMGNLISVL 71 (359)
Q Consensus 4 ~~id~~~~----~~~~~-~~~~~~a~~~~~~~--~~~~--~~~~~~~~l~~~la~~~~---~~~~~~~~~gt~a~~~~l~ 71 (359)
++|||.++ +.... +|++.+++.+.... +..+ ...+...+|.+.|+++++ .+.+++++||++|++.+++
T Consensus 381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~~~~~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK 460 (831)
T 4a0g_A 381 QQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVMFPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALK 460 (831)
T ss_dssp EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSCCCTTEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHH
T ss_pred heeeecccHhhcCCCCCCCHHHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHH
Confidence 67899874 55666 79999998875432 2111 125667799999999997 4567899999999999999
Q ss_pred Hhhh----hc------------CCeEE-ecCCCcceeeccccccccCCcc----------------------------ce
Q 018243 72 VHCE----TR------------GSEVI-LGDNSHIHIYENGGISTIGGVH----------------------------PR 106 (359)
Q Consensus 72 ~~~~----~~------------g~~vl-~~~~~~~~~~~~~~~~~~~g~~----------------------------~~ 106 (359)
.++. +. ..+|| ....+|..++. + ....|.. +.
T Consensus 461 ~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~g--a-ls~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 537 (831)
T 4a0g_A 461 MAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLG--A-MEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSW 537 (831)
T ss_dssp HHHHHHHHTTTC---------CCEEEEEETTCCCCSSHH--H-HHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEE
T ss_pred HHHHHHHhhcCCCccccccccCccEEEEecCCcccCcee--e-eeccCccccccccccccccCCccccCCccccccCCce
Confidence 8831 11 12455 44555555442 1 2222210 00
Q ss_pred eeecCCCCC---------CC------------------HHHHHHHhcCCCCCccCCceeEEEEecc-ccCCCce-ecChh
Q 018243 107 TVKNNQDGT---------MD------------------IDLIEAAIRDPKGEIVYPTTRLICLENT-HANCGGR-CLSVE 157 (359)
Q Consensus 107 ~v~~~~~~~---------~~------------------~~~l~~~l~~~~~~~~~~~~~~v~i~~~-~~~ptG~-~~~~~ 157 (359)
.++.+..+. -+ .+.|++.|++.....+..++++|++++. .+ .+|+ ++|.+
T Consensus 538 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg-~gG~~~~~~~ 616 (831)
T 4a0g_A 538 NISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHG-AGGMHMVDPL 616 (831)
T ss_dssp EEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEET-TTTSEEECHH
T ss_pred EecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEeccccc-CCCCccCCHH
Confidence 111111000 01 2567777763210011257899999997 55 5555 56789
Q ss_pred hHHHHHHHHHHcCcEEEEecccccchhhhcCch--hHhhhcCccEEEEeccccCCCce-e-eEEecCHHHHHHHHHHHH-
Q 018243 158 YTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP--VRRLVQAADSASVCLSKGLGAPV-G-SVIVGSKEFIKKARRLRK- 232 (359)
Q Consensus 158 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~g~~~-g-g~~~~~~~~~~~~~~~~~- 232 (359)
++++|+++|++||+++|+||++..... .|.. ...+...+|++ +++|.+++.. . |++++++++.+.+.....
T Consensus 617 ~L~~l~~lc~~~gilLI~DEV~tGfGR--tG~~fa~e~~gv~PDii--tlsK~L~gG~~Plgav~~~~~i~~~~~~~~~~ 692 (831)
T 4a0g_A 617 FQRVLVNECRNRKIPVIFDEVFTGFWR--LGVETTTELLGCKPDIA--CFAKLLTGGMVPLAVTLATDAVFDSFSGDSKL 692 (831)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTTTTTT--TSBSSTHHHHSSCCSEE--EECGGGGTTSSCCEEEEECHHHHHTTCSSCGG
T ss_pred HHHHHHHHHHHcCCeEEEEcCcccccc--CCCchhhHhcCCCCcEE--EEecccccCccCcEEEEECHHHHHHHhccccc
Confidence 999999999999999999999753222 2322 22222346655 6779886431 2 668888888887643211
Q ss_pred ---hhCCCcchhHHHHHHHHHHHHHhHHH-HhhhHHHH--------HHHHHHHHhcCCCceEecCCccceEEEEEeccch
Q 018243 233 ---TLGGGMRQVGVLCAAALVALQENVLV-MLDGDHKK--------AKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDS 300 (359)
Q Consensus 233 ---~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~--------~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 300 (359)
..+.++..+++.++++..+++...++ ..++..++ .+.+.+.+++.|.+... ...+.++.+.+..+.
T Consensus 693 ~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~v--rg~Gl~~~iel~~~~ 770 (831)
T 4a0g_A 693 KALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRV--VVIGTLFALELKADA 770 (831)
T ss_dssp GSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEE--EEETTEEEEEEC---
T ss_pred ccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeE--eecccEEEEEEecCc
Confidence 25667777888888888888654321 12222111 22455566667665543 246777777765310
Q ss_pred ------HHHHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Q 018243 301 ------KLYAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYAGV 353 (359)
Q Consensus 301 ------~~~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (359)
...+..+.+.|.++||.+.|.+ ..+|+++++.++++++++++++|.++++++
T Consensus 771 ~~~~~~~~~a~~~~~~l~e~Gv~v~p~g-~~lrl~pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 771 SNSGYASLYAKSLLIMLREDGIFTRPLG-NVIYLMCGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp ------CHHHHHHHHHHHHTTEECCCBT-TEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred cccccchHHHHHHHHHHHHCCcEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1246678899999999998875 799999888999999999999999998765
No 237
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=76.17 E-value=4.4 Score=36.26 Aligned_cols=24 Identities=8% Similarity=0.188 Sum_probs=21.8
Q ss_pred ChhhHHHHHHHHHHcCcEEEEecc
Q 018243 155 SVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 155 ~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
+.++++++++.|+++|+.||+|-+
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEc
Confidence 357899999999999999999966
No 238
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=70.06 E-value=15 Score=28.82 Aligned_cols=95 Identities=9% Similarity=0.082 Sum_probs=51.8
Q ss_pred hHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEE
Q 018243 63 TMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICL 142 (359)
Q Consensus 63 t~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i 142 (359)
|++++..+..+. ..+.++++..|.--..+....+....|.....++.. +.+++.+.+. .+..+|.+
T Consensus 42 TT~Llr~~~r~~-~~g~kvli~kp~~D~R~~~~~I~Sr~G~~~~a~~v~-----~~~di~~~i~--------~~~dvV~I 107 (219)
T 3e2i_A 42 SEELIRRLRRGI-YAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINIS-----KASEIMTHDL--------TNVDVIGI 107 (219)
T ss_dssp HHHHHHHHHHHH-HTTCCEEEEEEC-----------CBTTBCCEEEEES-----SGGGGGGSCC--------TTCSEEEE
T ss_pred HHHHHHHHHHHH-HcCCceEEEEeccCCcchhhhHHHhcCCceeeEEeC-----CHHHHHHHHh--------cCCCEEEE
Confidence 344554555555 356677777665322222123456667666555544 3344444343 45667777
Q ss_pred eccccCCCceecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 143 ENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 143 ~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
+= .+.++.+.++.+.+++ ..|+.||+=+-
T Consensus 108 DE------aQFf~~~~v~~l~~la-~~gi~Vi~~GL 136 (219)
T 3e2i_A 108 DE------VQFFDDEIVSIVEKLS-ADGHRVIVAGL 136 (219)
T ss_dssp CC------GGGSCTHHHHHHHHHH-HTTCEEEEEEE
T ss_pred ec------hhcCCHHHHHHHHHHH-HCCCEEEEeec
Confidence 43 4566666777788888 68999998754
No 239
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=68.05 E-value=9.4 Score=31.83 Aligned_cols=70 Identities=13% Similarity=0.080 Sum_probs=47.9
Q ss_pred cCCccceee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEE
Q 018243 100 IGGVHPRTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHI 175 (359)
Q Consensus 100 ~~g~~~~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~ 175 (359)
+.|+-+-.+ |.++++.+|.+.+++.++...+ .++..+++..+.. -+..++.+|..++.+.+.+. .+++|+
T Consensus 15 ~~Gi~~alvTPf~~dg~iD~~~l~~lv~~li~----~Gv~Gl~v~GtTG--E~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 15 IAGIYPPVTTPFTATAEVDYGKLEENLHKLGT----FPFRGFVVQGSNG--EFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp CCEEECBCCCCBCTTSCBCHHHHHHHHHHHTT----SCCSEEEESSGGG--TGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred CCceEEeeEccCCCCCCcCHHHHHHHHHHHHH----cCCCEEEECcccc--chhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 445433333 6778899999999988875432 3566777634333 35678889999999998875 466766
No 240
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=65.74 E-value=7.7 Score=32.23 Aligned_cols=73 Identities=12% Similarity=0.074 Sum_probs=48.5
Q ss_pred cccCCccceee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEE
Q 018243 98 STIGGVHPRTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKL 173 (359)
Q Consensus 98 ~~~~g~~~~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~l 173 (359)
..+.|+-+-.+ |.++++.+|.+.+++.++...+ .++..+++..+.. -+..++.+|..++.+.+.+. .+++
T Consensus 11 ~~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~----~Gv~gl~v~GtTG--E~~~Ls~eEr~~v~~~~~~~~~grvpV 84 (301)
T 1xky_A 11 IDFGTIATAMVTPFDINGNIDFAKTTKLVNYLID----NGTTAIVVGGTTG--ESPTLTSEEKVALYRHVVSVVDKRVPV 84 (301)
T ss_dssp CCCCSEEEECCCCBCTTSSBCHHHHHHHHHHHHH----TTCCEEEESSTTT--TGGGSCHHHHHHHHHHHHHHHTTSSCE
T ss_pred cCCCceEEeeECcCCCCCCcCHHHHHHHHHHHHH----cCCCEEEECcccc--ChhhCCHHHHHHHHHHHHHHhCCCceE
Confidence 55566444444 6778899999998888764322 3566777633332 35678889999999988764 4666
Q ss_pred EEe
Q 018243 174 HID 176 (359)
Q Consensus 174 i~D 176 (359)
|+=
T Consensus 85 iaG 87 (301)
T 1xky_A 85 IAG 87 (301)
T ss_dssp EEE
T ss_pred EeC
Confidence 654
No 241
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=65.19 E-value=6.9 Score=34.64 Aligned_cols=43 Identities=7% Similarity=0.004 Sum_probs=31.2
Q ss_pred ceeEEEEeccccCCCce----------------ecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 136 TTRLICLENTHANCGGR----------------CLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 136 ~~~~v~i~~~~~~ptG~----------------~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
++.+|++.|+..++.+. .-+.++++++++.|+++|+.||+|-+
T Consensus 28 Gv~~I~l~Pi~~~~~~~~~~~gY~~~~y~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 28 GYAAVQVSPPNEHITGSQWWTRYQPVSYELQSRGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp TCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCEEEECCccccCCCCCCcccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 55667776655544321 11357899999999999999999976
No 242
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=63.68 E-value=9 Score=31.87 Aligned_cols=71 Identities=8% Similarity=0.016 Sum_probs=48.2
Q ss_pred cCCccceee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEE
Q 018243 100 IGGVHPRTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHI 175 (359)
Q Consensus 100 ~~g~~~~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~ 175 (359)
+.|+-+-.+ |.++++.+|.+.+++.++...+ .++..+++..+.. -+..++.+|..++.+.+.+. .+++|+
T Consensus 16 ~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~----~Gv~gi~v~GttG--E~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 16 LGTLLTAMVTPFSGDGSLDTATAARLANHLVD----QGCDGLVVSGTTG--ESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp HCSEEEECCCCBCTTSCBCHHHHHHHHHHHHH----TTCSEEEESSTTT--TGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCceEEEEECCCCCCCCcCHHHHHHHHHHHHH----cCCCEEEeCcccc--chhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 445443334 7778899999998888874322 3566777633332 35678889999999988764 467777
Q ss_pred e
Q 018243 176 D 176 (359)
Q Consensus 176 D 176 (359)
=
T Consensus 90 G 90 (304)
T 3l21_A 90 G 90 (304)
T ss_dssp E
T ss_pred e
Confidence 4
No 243
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=63.58 E-value=11 Score=31.29 Aligned_cols=72 Identities=14% Similarity=0.120 Sum_probs=47.7
Q ss_pred ccCCccceee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEE
Q 018243 99 TIGGVHPRTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLH 174 (359)
Q Consensus 99 ~~~g~~~~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li 174 (359)
.+.|+-+-.+ |.++++.+|.+.+++.++...+ .++..+++..+.. -+..++.++..++.+.+.+. .+++|
T Consensus 11 ~~~Gv~~a~vTPF~~dg~iD~~~l~~lv~~li~----~Gv~Gl~v~GtTG--E~~~Ls~eEr~~v~~~~~~~~~grvpVi 84 (303)
T 2wkj_A 11 NLRGVMAALLTPFDQQQALDKASLRRLVQFNIQ----QGIDGLYVGGSTG--EAFVQSLSEREQVLEIVAEEAKGKIKLI 84 (303)
T ss_dssp GGCSEEEECCCCBCTTSSBCHHHHHHHHHHHHH----TTCSEEEESSTTT--TGGGSCHHHHHHHHHHHHHHHTTTSEEE
T ss_pred CCCceEEeeEcCCCCCCCcCHHHHHHHHHHHHH----cCCCEEEECeecc--ChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 3445433334 6778899999998888764322 3566777633332 35678889999999988764 46777
Q ss_pred Ee
Q 018243 175 ID 176 (359)
Q Consensus 175 ~D 176 (359)
+=
T Consensus 85 aG 86 (303)
T 2wkj_A 85 AH 86 (303)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 244
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=62.74 E-value=16 Score=23.16 Aligned_cols=47 Identities=15% Similarity=0.122 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhcCcee-ccCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018243 302 LYAACLLKKLEEHGVLV-MPESSTRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 302 ~~~~~~~~~l~~~gi~~-~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
.+++.+.+.|...|+.. +..+....|+-+.+..+.++.+.+.+.|++
T Consensus 21 ~~A~~l~~~L~~~G~~a~i~~~~~~yRV~vGpf~s~~~A~~~~~~L~~ 68 (81)
T 1uta_A 21 EQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKM 68 (81)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECSSSEEEEESSCBTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCcEEEEEECCcCCHHHHHHHHHHHHH
Confidence 47888999998778653 112445678777778888898888888876
No 245
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=60.35 E-value=9.6 Score=31.88 Aligned_cols=61 Identities=11% Similarity=0.038 Sum_probs=44.1
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc--CcEEEE
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH--GLKLHI 175 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~--~~~li~ 175 (359)
|.++++.+|.+.+++.++...+ .++..+++..+.. -+..++.++..++.+.+.+. .++||+
T Consensus 19 Pf~~dg~iD~~~l~~lv~~li~----~Gv~Gl~v~GtTG--E~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 19 PFHDDGKIDDVSIDRLTDFYAE----VGCEGVTVLGILG--EAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHH----TTCSEEEESTGGG--TGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHH----CCCCEEEeCccCc--ChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 6778899999998888764322 4566777634333 35678889999999988776 577777
No 246
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=59.95 E-value=7.7 Score=32.39 Aligned_cols=71 Identities=11% Similarity=0.175 Sum_probs=47.1
Q ss_pred cCCccceee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEE
Q 018243 100 IGGVHPRTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHI 175 (359)
Q Consensus 100 ~~g~~~~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~ 175 (359)
+.|+-+-.+ |.++++.+|.+.+++.++...+ .++..+++..+.. -+..++.+|..++.+.+.+. .+++|+
T Consensus 9 ~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~----~Gv~gl~v~GtTG--E~~~Ls~~Er~~v~~~~~~~~~grvpvia 82 (309)
T 3fkr_A 9 HRGIFPVVPTTFADTGDLDLASQKRAVDFMID----AGSDGLCILANFS--EQFAITDDERDVLTRTILEHVAGRVPVIV 82 (309)
T ss_dssp CCEECCBCCCCBCTTSSBCHHHHHHHHHHHHH----TTCSCEEESSGGG--TGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCceEEeeeCCCCcCCCcCHHHHHHHHHHHHH----cCCCEEEECcccc--CcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 344333333 6778899999999888874322 3566666633332 35678889999999988765 466666
Q ss_pred e
Q 018243 176 D 176 (359)
Q Consensus 176 D 176 (359)
=
T Consensus 83 G 83 (309)
T 3fkr_A 83 T 83 (309)
T ss_dssp E
T ss_pred e
Confidence 5
No 247
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=59.71 E-value=10 Score=31.49 Aligned_cols=61 Identities=26% Similarity=0.174 Sum_probs=43.5
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEE
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHI 175 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~ 175 (359)
|.++++.+|.+.+++.++...+ .++..+++..+. .-+..++.+|..++.+.+.+. .+++|+
T Consensus 18 Pf~~dg~iD~~~l~~lv~~li~----~Gv~gl~~~Gtt--GE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 18 PMNQDGSIHYEQLRDLIDWHIE----NGTDGIVAVGTT--GESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHH----TTCCEEEESSTT--TTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHH----cCCCEEEeCccc--cCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 6778899999998888764321 456677763333 236678889999999988764 467776
No 248
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=58.95 E-value=12 Score=33.28 Aligned_cols=58 Identities=7% Similarity=-0.025 Sum_probs=38.6
Q ss_pred CHHHHHHHh-cCCCCCccCCceeEEEEeccccCCCc--------e----------ecChhhHHHHHHHHHHcCcEEEEec
Q 018243 117 DIDLIEAAI-RDPKGEIVYPTTRLICLENTHANCGG--------R----------CLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 117 ~~~~l~~~l-~~~~~~~~~~~~~~v~i~~~~~~ptG--------~----------~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
+.+.+.+.+ +-..+ -++.+|++.|+..++.+ . .-+.++++++++.|+++|+.||+|-
T Consensus 20 ~~~gi~~~~ldyL~~----LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~dy~idp~~Gt~~d~~~lv~~~h~~Gi~VilD~ 95 (471)
T 1jae_A 20 KWNDIADECERFLQP----QGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESAFTDMTRRCNDAGVRIYVDA 95 (471)
T ss_dssp CHHHHHHHHHHTTTT----TTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHH----cCCCEEEeCccccccCCCCCCcccccccccccccCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 455555552 32211 46778888766665542 1 1135789999999999999999997
Q ss_pred c
Q 018243 178 A 178 (359)
Q Consensus 178 a 178 (359)
+
T Consensus 96 V 96 (471)
T 1jae_A 96 V 96 (471)
T ss_dssp C
T ss_pred e
Confidence 6
No 249
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=58.28 E-value=12 Score=31.07 Aligned_cols=62 Identities=11% Similarity=0.025 Sum_probs=42.9
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEEe
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHID 176 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~D 176 (359)
|.++++.+|.+.+++.++...+ .++..+++..+.. -+..++.+|..++.+.+.+. .+++|+=
T Consensus 27 Pf~~dg~iD~~~l~~lv~~li~----~Gv~gl~v~GttG--E~~~Ls~~Er~~v~~~~~~~~~grvpviaG 91 (304)
T 3cpr_A 27 PFTESGDIDIAAGREVAAYLVD----KGLDSLVLAGTTG--ESPTTTAAEKLELLKAVREEVGDRAKLIAG 91 (304)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHH----TTCCEEEESSTTT--TTTTSCHHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHH----cCCCEEEECcccc--ChhhCCHHHHHHHHHHHHHHhCCCCcEEec
Confidence 6677899999998888774322 3566777633332 35677889999999888764 3666654
No 250
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=56.74 E-value=46 Score=26.51 Aligned_cols=64 Identities=13% Similarity=0.090 Sum_probs=37.0
Q ss_pred eEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCC
Q 018243 56 GLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDP 128 (359)
Q Consensus 56 ~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~ 128 (359)
.+++|+|+..+=.++...+.+.|-+|++..-.-.. .....+.++..+..+- -|.+++++.+++.
T Consensus 13 ~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~------~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~ 76 (242)
T 4b79_A 13 QVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADG------VHAPRHPRIRREELDI---TDSQRLQRLFEAL 76 (242)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTS------TTSCCCTTEEEEECCT---TCHHHHHHHHHHC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH------HhhhhcCCeEEEEecC---CCHHHHHHHHHhc
Confidence 46777777777777666666788888765533111 1222233444443321 1778888888753
No 251
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=56.28 E-value=10 Score=31.80 Aligned_cols=71 Identities=10% Similarity=0.021 Sum_probs=47.4
Q ss_pred cCCccceee-ecCC-CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEE
Q 018243 100 IGGVHPRTV-KNNQ-DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLH 174 (359)
Q Consensus 100 ~~g~~~~~v-~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li 174 (359)
+.|+-+..+ |.++ ++.+|.+.+++.++...+ .++..+++..+. .-+..++.++..++.+.+.+. .++||
T Consensus 12 ~~Gv~~a~vTPf~~~dg~iD~~~l~~lv~~li~----~Gv~Gl~v~GtT--GE~~~Ls~eEr~~v~~~~v~~~~grvpVi 85 (316)
T 3e96_A 12 LETISGIPITPFRKSDGSIDWHHYKETVDRIVD----NGIDVIVPCGNT--SEFYALSLEEAKEEVRRTVEYVHGRALVV 85 (316)
T ss_dssp TSSEEECCCCCBCTTTCCBCHHHHHHHHHHHHT----TTCCEECTTSGG--GTGGGSCHHHHHHHHHHHHHHHTTSSEEE
T ss_pred CCceEEeeeCCccCCCCCCCHHHHHHHHHHHHH----cCCCEEEeCccc--cCcccCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 455433334 6777 899999998888775322 456677763333 235678889999999988765 46666
Q ss_pred Ee
Q 018243 175 ID 176 (359)
Q Consensus 175 ~D 176 (359)
+=
T Consensus 86 aG 87 (316)
T 3e96_A 86 AG 87 (316)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 252
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=55.35 E-value=39 Score=26.32 Aligned_cols=126 Identities=12% Similarity=0.048 Sum_probs=56.3
Q ss_pred hHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEE
Q 018243 63 TMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICL 142 (359)
Q Consensus 63 t~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i 142 (359)
|++++-.+..+. ..|.+|++..|.-...+....+....|.....++.. +.+++.+.+. .+..+|++
T Consensus 42 TT~lL~~a~r~~-~~g~kVli~k~~~d~R~ge~~i~s~~g~~~~a~~~~-----~~~~~~~~~~--------~~~dvViI 107 (214)
T 2j9r_A 42 SEELIRRVRRTQ-FAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVS-----ASKDIFKHIT--------EEMDVIAI 107 (214)
T ss_dssp HHHHHHHHHHHH-HTTCCEEEEECC-----------------CCEEECS-----SGGGGGGGCC--------SSCCEEEE
T ss_pred HHHHHHHHHHHH-HCCCEEEEEEeccCCcchHHHHHhhcCCeeEEeecC-----CHHHHHHHHh--------cCCCEEEE
Confidence 445555555555 367778777665322221112344446555444433 2233333333 24567887
Q ss_pred eccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhhcCccEEEE-eccccCC
Q 018243 143 ENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLVQAADSASV-CLSKGLG 210 (359)
Q Consensus 143 ~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~-s~~K~~g 210 (359)
+= .+.++.+.++.+.+++.+ |+.+|+=+-..- ...........+...+|.++- ..-|+.+
T Consensus 108 DE------aQF~~~~~V~~l~~l~~~-~~~Vi~~Gl~~D-F~~~~F~~~~~Ll~~AD~Vtel~aiC~~C 168 (214)
T 2j9r_A 108 DE------VQFFDGDIVEVVQVLANR-GYRVIVAGLDQD-FRGLPFGQVPQLMAIAEHVTKLQAVCSAC 168 (214)
T ss_dssp CC------GGGSCTTHHHHHHHHHHT-TCEEEEEECSBC-TTSCBCTTHHHHHHHCSEEEECCCBCTTT
T ss_pred EC------cccCCHHHHHHHHHHhhC-CCEEEEEecccc-cccCccccHHHHHHhcccEEeeeeEecCc
Confidence 44 344666677666666654 888888653111 111112234445556776654 4444443
No 253
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=55.23 E-value=9.5 Score=31.90 Aligned_cols=61 Identities=16% Similarity=0.077 Sum_probs=43.2
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEE
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHI 175 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~ 175 (359)
|.++++.+|.+.+++.++...+ .++..+++..+.. -+..++.+|..++.+.+.+. .++||+
T Consensus 34 Pf~~dg~iD~~~l~~lv~~li~----~Gv~Gl~v~GtTG--E~~~Ls~~Er~~v~~~~v~~~~grvpVia 97 (314)
T 3qze_A 34 PFDAQGRLDWDSLAKLVDFHLQ----EGTNAIVAVGTTG--ESATLDVEEHIQVIRRVVDQVKGRIPVIA 97 (314)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHH----HTCCEEEESSGGG--TGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHH----cCCCEEEECcccc--ChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 6778899999999887764221 3566777634333 36778889999999887764 466776
No 254
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=55.20 E-value=38 Score=21.57 Aligned_cols=45 Identities=13% Similarity=0.197 Sum_probs=32.4
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
.++..+.+++ .+.++|++.+... .+-...+..+|++++++++.-.
T Consensus 16 ~~~v~kai~~-------gkaklViiA~D~~--------~~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 16 TKQTVKALKR-------GSVKEVVVAKDAD--------PILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHHHHHTT-------TCEEEEEEETTSC--------HHHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHHHHc-------CCeeEEEEeCCCC--------HHHHHHHHHHHHHcCCCEEEEC
Confidence 4567777875 6788888844332 2347888999999999988754
No 255
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=54.63 E-value=8.3 Score=32.30 Aligned_cols=61 Identities=18% Similarity=0.145 Sum_probs=43.3
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEE
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHI 175 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~ 175 (359)
|.++++.+|.+.+++.++...+ .++..+++..+.. -+..++.+|..++.+.+.+. .++||+
T Consensus 35 Pf~~dg~iD~~~l~~lv~~li~----~Gv~Gi~v~GtTG--E~~~Ls~~Er~~v~~~~v~~~~grvpVia 98 (315)
T 3na8_A 35 PFAADGGLDLPALGRSIERLID----GGVHAIAPLGSTG--EGAYLSDPEWDEVVDFTLKTVAHRVPTIV 98 (315)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHH----TTCSEEECSSGGG--TGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHH----cCCCEEEECcccc--ChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 6778899999998888774322 4566777634333 35678889999999988764 466666
No 256
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=54.59 E-value=16 Score=31.10 Aligned_cols=71 Identities=11% Similarity=0.027 Sum_probs=46.7
Q ss_pred cCCccceee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEE
Q 018243 100 IGGVHPRTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHI 175 (359)
Q Consensus 100 ~~g~~~~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~ 175 (359)
..|+-+-.+ |.++++.+|.+.+++.++...+ .++..+++..+.. -+..++.+|..++.+.+.+. .+.+|+
T Consensus 60 ~~Gi~~alvTPF~~dg~ID~~al~~lv~~li~----~Gv~Gl~v~GTTG--E~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 60 ALRVITAIKTPYLPDGRFDLEAYDDLVNIQIQ----NGAEGVIVGGTTG--EGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp TCCEEEECCCCBCTTSSBCHHHHHHHHHHHHH----TTCCEEEESSTTT--TGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred cCCeEEEEeCcCCCCCCcCHHHHHHHHHHHHH----cCCCEEEeccccc--ChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 345333333 7778899999998888764322 4566777733332 35678889999998887664 467776
Q ss_pred e
Q 018243 176 D 176 (359)
Q Consensus 176 D 176 (359)
-
T Consensus 134 G 134 (360)
T 4dpp_A 134 N 134 (360)
T ss_dssp E
T ss_pred e
Confidence 3
No 257
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=54.33 E-value=8.3 Score=24.88 Aligned_cols=20 Identities=10% Similarity=-0.024 Sum_probs=17.9
Q ss_pred HHHHHHHHHHcCcEEEEecc
Q 018243 159 TDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a 178 (359)
-.+|+++++++|++++.|-.
T Consensus 29 A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 58899999999999999953
No 258
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=53.51 E-value=13 Score=31.45 Aligned_cols=70 Identities=19% Similarity=0.160 Sum_probs=45.6
Q ss_pred CCccceee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEEe
Q 018243 101 GGVHPRTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHID 176 (359)
Q Consensus 101 ~g~~~~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~D 176 (359)
.|+-+-.+ |.++++.+|.+.+++.++...+ .++..|++..+.. -+..++.+|..++.+.+.+. .++||+=
T Consensus 33 ~Gv~~alvTPF~~dg~ID~~~l~~lv~~li~----~Gv~Gl~v~GtTG--E~~~Ls~eEr~~vi~~~ve~~~grvpViaG 106 (343)
T 2v9d_A 33 TGIIPPVSTIFTADGQLDKPGTAALIDDLIK----AGVDGLFFLGSGG--EFSQLGAEERKAIARFAIDHVDRRVPVLIG 106 (343)
T ss_dssp CEECCEECCCBCTTSSBCHHHHHHHHHHHHH----TTCSCEEESSTTT--TGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCeEEeeECCCCCCCCcCHHHHHHHHHHHHH----cCCCEEEeCcccc--ChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 34333333 6677899999998888764322 3555666633332 35678889999999987764 4666654
No 259
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=53.14 E-value=11 Score=31.00 Aligned_cols=61 Identities=18% Similarity=0.085 Sum_probs=42.9
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEE
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHI 175 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~ 175 (359)
|.++++.+|.+.+++.++...+ .++..+++..+.. -+..++.+|..++.+.+.+. .+++|+
T Consensus 12 Pf~~dg~iD~~~l~~lv~~li~----~Gv~gl~~~GttG--E~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 12 PMLKDGGVDWKSLEKLVEWHIE----QGTNSIVAVGTTG--EASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHH----HTCCEEEESSTTT--TGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHH----CCCCEEEECcccc--ccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 6677899999998888774321 3566676634332 35678889999999988764 467776
No 260
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=52.56 E-value=11 Score=31.47 Aligned_cols=71 Identities=20% Similarity=0.133 Sum_probs=46.9
Q ss_pred cCCccceee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEE
Q 018243 100 IGGVHPRTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHI 175 (359)
Q Consensus 100 ~~g~~~~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~ 175 (359)
+.|+-+-.+ |.++++.+|.+.+++.++...+ .++..+++..+.. =+..++.+|..++.+.+.+. .+++|+
T Consensus 8 ~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~----~Gv~Gl~v~GtTG--E~~~Ls~~Er~~v~~~~~~~~~grvpVia 81 (311)
T 3h5d_A 8 ECKIITAFITPFHEDGSINFDAIPALIEHLLA----HHTDGILLAGTTA--ESPTLTHDEELELFAAVQKVVNGRVPLIA 81 (311)
T ss_dssp TCCEEEECCCCBCTTSSBCTTHHHHHHHHHHH----TTCCCEEESSTTT--TGGGSCHHHHHHHHHHHHHHSCSSSCEEE
T ss_pred cCceEEeeecCCCCCCCcCHHHHHHHHHHHHH----cCCCEEEECcccc--ChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 445433333 6778899999888887764321 4566666633332 35678889999999988775 466766
Q ss_pred e
Q 018243 176 D 176 (359)
Q Consensus 176 D 176 (359)
=
T Consensus 82 G 82 (311)
T 3h5d_A 82 G 82 (311)
T ss_dssp E
T ss_pred e
Confidence 3
No 261
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=52.10 E-value=12 Score=30.86 Aligned_cols=62 Identities=11% Similarity=0.034 Sum_probs=42.6
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEEe
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHID 176 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~D 176 (359)
|.++++.+|.+.+++.++...+ .++..+++..+.. -+..++.++..++.+.+.+. .+++|+=
T Consensus 12 Pf~~dg~iD~~~l~~lv~~li~----~Gv~gl~~~GttG--E~~~Ls~~Er~~v~~~~~~~~~gr~pviaG 76 (292)
T 2ojp_A 12 PMDEKGNVCRASLKKLIDYHVA----SGTSAIVSVGTTG--ESATLNHDEHADVVMMTLDLADGRIPVIAG 76 (292)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHH----HTCCEEEESSTTT--TGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHH----cCCCEEEECcccc--chhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 5667899999998888774322 3566676633332 35678889999999988764 3666654
No 262
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=52.05 E-value=13 Score=31.44 Aligned_cols=62 Identities=16% Similarity=0.090 Sum_probs=43.1
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEEe
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHID 176 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~D 176 (359)
|.++++.+|.+.+++.++...+ .++..|++..+.. =+..++.++..++.+.+.+. .++||+=
T Consensus 45 PF~~dg~iD~~~l~~lv~~li~----~Gv~Gl~v~GtTG--E~~~Ls~eEr~~vi~~~ve~~~grvpViaG 109 (332)
T 2r8w_A 45 PADEAGRVDIEAFSALIARLDA----AEVDSVGILGSTG--IYMYLTREERRRAIEAAATILRGRRTLMAG 109 (332)
T ss_dssp CBCTTCCBCHHHHHHHHHHHHH----HTCSEEEESSTTT--TGGGSCHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CcCCCCCcCHHHHHHHHHHHHH----cCCCEEEECcccc--ChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 6677899999998888774322 3566676633332 35678889999999988764 4777763
No 263
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=51.77 E-value=11 Score=31.65 Aligned_cols=61 Identities=10% Similarity=0.027 Sum_probs=43.2
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEE
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHI 175 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~ 175 (359)
|.++++.+|.+.+++.++...+ .++..+++..+. .-+..++.++..++.+.+.+. .++||+
T Consensus 33 Pf~~dg~iD~~~l~~li~~li~----~Gv~Gl~v~GtT--GE~~~Ls~~Er~~v~~~~v~~~~grvpVia 96 (315)
T 3si9_A 33 PFDDNGAIDEKAFCNFVEWQIT----QGINGVSPVGTT--GESPTLTHEEHKRIIELCVEQVAKRVPVVA 96 (315)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHH----TTCSEEECSSTT--TTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHH----cCCCEEEeCccc--cCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 6778899999998888774322 456677763333 235678889999999988764 466766
No 264
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=50.96 E-value=35 Score=28.37 Aligned_cols=77 Identities=13% Similarity=0.105 Sum_probs=45.8
Q ss_pred cCCeEEecCCCcceeeccccccccCCccceee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecC
Q 018243 77 RGSEVILGDNSHIHIYENGGISTIGGVHPRTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLS 155 (359)
Q Consensus 77 ~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~ 155 (359)
++..+++..+.|.. + ++.+|++.+.+ .......++..+|.+.++...+ .++++|+.++..+ +
T Consensus 189 ~~~~~v~~H~af~Y-f-----a~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~----~~v~~If~e~~~~-~------ 251 (312)
T 2o1e_A 189 EKKEFITQHTAFGY-L-----AKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKE----HNVKVIYFEEIAS-S------ 251 (312)
T ss_dssp SCCEEEESSCTTHH-H-----HHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTS----SCCCEEECSSCCC-H------
T ss_pred CCCEEEEECCchHH-H-----HHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHH----cCCCEEEEeCCCC-h------
Confidence 45668887776332 2 56678776665 2333455677766666553211 5788888855443 1
Q ss_pred hhhHHHHHHHHHHcCcEEE
Q 018243 156 VEYTDSVGEIAKKHGLKLH 174 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li 174 (359)
+-+..++++.|+.++
T Consensus 252 ----~~~~~ia~e~g~~v~ 266 (312)
T 2o1e_A 252 ----KVADTLASEIGAKTE 266 (312)
T ss_dssp ----HHHHHHHHHTCCEEE
T ss_pred ----HHHHHHHHHhCCcEE
Confidence 334455778888764
No 265
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=50.76 E-value=18 Score=29.88 Aligned_cols=63 Identities=21% Similarity=0.202 Sum_probs=42.6
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEEe
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHID 176 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~D 176 (359)
|.++++.+|.+.+++.++...+. .++..+++..+.. -+..++.++..++.+.+.+. .+++|+=
T Consensus 14 Pf~~dg~iD~~~l~~lv~~li~~---~Gv~gl~~~GttG--E~~~Ls~~Er~~v~~~~~~~~~grvpviaG 79 (293)
T 1f6k_A 14 SFNEDGTINEKGLRQIIRHNIDK---MKVDGLYVGGSTG--ENFMLSTEEKKEIFRIAKDEAKDQIALIAQ 79 (293)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHT---SCCSEEEESSGGG--TGGGSCHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHhh---CCCcEEEeCcccc--chhhCCHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 66678999999999888753220 2455666633332 35678889999999988764 4666654
No 266
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=50.69 E-value=25 Score=22.02 Aligned_cols=46 Identities=11% Similarity=0.051 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhcCcee--ccCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q 018243 302 LYAACLLKKLEEHGVLV--MPESSTRVRIVVHHQISANDVHYTLSCFQK 348 (359)
Q Consensus 302 ~~~~~~~~~l~~~gi~~--~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 348 (359)
.+++.+.+.|...|+.. .. +....|+-+.+..+.++.+.+++.|++
T Consensus 21 ~~A~~~~~~L~~~g~~~~i~~-~~~~yRV~vGpf~~~~~A~~~~~~L~~ 68 (79)
T 1x60_A 21 ANADSLASNAEAKGFDSIVLL-KDGLYKVQIGAFSSKDNADTLAARAKN 68 (79)
T ss_dssp HHHHHHHHHHHHHTCCEEEEE-ETTEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCeEEec-CCcEEEEEECCcCCHHHHHHHHHHHHH
Confidence 47888999997777643 33 334566666557888999999888876
No 267
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=50.41 E-value=16 Score=30.25 Aligned_cols=62 Identities=18% Similarity=0.115 Sum_probs=42.5
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEEe
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHID 176 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~D 176 (359)
|.++++.+|.+.+++.++...+ .++..+++..+.. =+..++.+|..++.+.+.+. .+++|+=
T Consensus 14 Pf~~dg~iD~~~l~~lv~~li~----~Gv~gl~~~GttG--E~~~Ls~~Er~~v~~~~~~~~~gr~pviaG 78 (294)
T 3b4u_A 14 PFKTDGTVDIDAMIAHARRCLS----NGCDSVTLFGTTG--EGCSVGSRERQAILSSFIAAGIAPSRIVTG 78 (294)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHH----TTCSEEEESSTTT--TGGGSCHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHH----cCCCEEEECcccc--ChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 6667899999998887764322 3566677633332 35678889999999998875 3555543
No 268
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=49.23 E-value=76 Score=24.06 Aligned_cols=94 Identities=13% Similarity=0.117 Sum_probs=46.4
Q ss_pred hHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEE
Q 018243 63 TMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICL 142 (359)
Q Consensus 63 t~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i 142 (359)
|++++..+..+. ..|.+|++..|.-...+....+....|.....+... +.+++.+.+. .+..+|++
T Consensus 22 TT~ll~~a~r~~-~~g~kV~v~k~~~d~r~~~~~i~s~~g~~~~a~~~~-----~~~~i~~~~~--------~~~dvViI 87 (191)
T 1xx6_A 22 SEELIRRIRRAK-IAKQKIQVFKPEIDNRYSKEDVVSHMGEKEQAVAIK-----NSREILKYFE--------EDTEVIAI 87 (191)
T ss_dssp HHHHHHHHHHHH-HTTCCEEEEEEC-------CEEECTTSCEEECEEES-----SSTHHHHHCC--------TTCSEEEE
T ss_pred HHHHHHHHHHHH-HCCCEEEEEEeccCccchHHHHHhhcCCceeeEeeC-----CHHHHHHHHh--------ccCCEEEE
Confidence 344444444444 366677766543222111112233445443333332 2235555554 34568888
Q ss_pred eccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 143 ENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 143 ~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
+- .+.++.+.++.+.+++.+ |+.+|+=+
T Consensus 88 DE------aqfl~~~~v~~l~~l~~~-~~~Vi~~G 115 (191)
T 1xx6_A 88 DE------VQFFDDEIVEIVNKIAES-GRRVICAG 115 (191)
T ss_dssp CS------GGGSCTHHHHHHHHHHHT-TCEEEEEE
T ss_pred EC------CCCCCHHHHHHHHHHHhC-CCEEEEEe
Confidence 54 233555567777777665 88888843
No 269
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=48.90 E-value=14 Score=31.29 Aligned_cols=62 Identities=16% Similarity=0.050 Sum_probs=41.8
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEe
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
|.++++.+|.+.+++.++...+ .++..|++..+.. =+..++.++..++.+.+....++||+=
T Consensus 37 PF~~dg~ID~~~l~~lv~~li~----~Gv~Gl~v~GtTG--E~~~Ls~eEr~~vi~~~~~grvpViaG 98 (344)
T 2hmc_A 37 PCRQDRTPDFDALVRKGKELIA----DGMSAVVYCGSMG--DWPLLTDEQRMEGVERLVKAGIPVIVG 98 (344)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHH----TTCCCEEESSGGG--TGGGSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHH----cCCCEEEeCccCc--ChhhCCHHHHHHHHHHHhCCCCcEEEe
Confidence 6677899999998887774322 3555666633332 256788889999998844445777654
No 270
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=47.32 E-value=76 Score=24.78 Aligned_cols=42 Identities=24% Similarity=0.432 Sum_probs=29.6
Q ss_pred ceeEEEEeccccCCCceecChhhHHHHHHHHHHc-CcEEEEec
Q 018243 136 TTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH-GLKLHIDG 177 (359)
Q Consensus 136 ~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~-~~~li~D~ 177 (359)
....|++.+.....+|..++..-++.+.++.+.. +.++++|+
T Consensus 138 ~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~G 180 (228)
T 1h1y_A 138 PVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDG 180 (228)
T ss_dssp CCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEES
T ss_pred CCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEEC
Confidence 3446777555543457777777788888777776 88999987
No 271
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=47.25 E-value=12 Score=25.03 Aligned_cols=20 Identities=15% Similarity=0.127 Sum_probs=17.9
Q ss_pred HHHHHHHHHHcCcEEEEecc
Q 018243 159 TDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a 178 (359)
-.+|+++|+++|++++.|-.
T Consensus 44 A~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCeEEECHH
Confidence 58899999999999999964
No 272
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=47.16 E-value=12 Score=24.66 Aligned_cols=20 Identities=20% Similarity=0.120 Sum_probs=17.9
Q ss_pred HHHHHHHHHHcCcEEEEecc
Q 018243 159 TDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a 178 (359)
-.+|+++|+++|++++.|-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDVK 48 (93)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEECHH
Confidence 58899999999999999963
No 273
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=46.74 E-value=18 Score=29.83 Aligned_cols=61 Identities=11% Similarity=0.073 Sum_probs=41.4
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEEe
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHID 176 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~D 176 (359)
|.++++ +|.+.+++.++...+ .++..+++..+.. -+..++.++..++.+.+.+. .+++|+=
T Consensus 13 Pf~~dg-iD~~~l~~lv~~li~----~Gv~gl~~~GttG--E~~~Ls~~Er~~v~~~~~~~~~gr~pvi~G 76 (291)
T 3a5f_A 13 PFTNTG-VDFDKLSELIEWHIK----SKTDAIIVCGTTG--EATTMTETERKETIKFVIDKVNKRIPVIAG 76 (291)
T ss_dssp CBCSSS-BCHHHHHHHHHHHHH----TTCCEEEESSGGG--TGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CcCCCC-cCHHHHHHHHHHHHH----cCCCEEEECcccc--ChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 566788 999988888764322 3566776634332 35678889999999887764 3666654
No 274
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=46.60 E-value=12 Score=30.76 Aligned_cols=66 Identities=12% Similarity=0.043 Sum_probs=38.9
Q ss_pred cccCCccceee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEE
Q 018243 98 STIGGVHPRTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 98 ~~~~g~~~~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 175 (359)
++.+|++.+.+ .......++..+|.+.++...+ .++++|+.++..+ ..-.+.|.+.+++.|+.+++
T Consensus 177 ~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~----~~v~~if~e~~~~--------~~~~~~l~~~a~~~g~~v~~ 243 (282)
T 3mfq_A 177 AASYDFTLYAPQGVSTDSEVANSDMIETVNLIID----HNIKAIFTESTTN--------PERMKKLQEAVKAKGGQVEV 243 (282)
T ss_dssp HHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHH----HTCCEEECBTTSC--------THHHHHHHHHHHTTSCCCEE
T ss_pred HHHCCCeEecccccCCCCCCCHHHHHHHHHHHHH----cCCCEEEEeCCCC--------hHHHHHHHHHHHhcCCceEE
Confidence 56677776544 2233344566655554432110 5788888855443 22357788889999877654
No 275
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=46.21 E-value=15 Score=30.70 Aligned_cols=71 Identities=7% Similarity=0.003 Sum_probs=45.7
Q ss_pred cCCccceee-ec-CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEE
Q 018243 100 IGGVHPRTV-KN-NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLH 174 (359)
Q Consensus 100 ~~g~~~~~v-~~-~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li 174 (359)
+.|+-+..+ |. ++++.+|.+.+++.++...+ .++..+++..+. .=+..++.++..++.+.+.+. .++||
T Consensus 12 ~~Gv~~a~vTPF~~~dg~iD~~~l~~lv~~li~----~Gv~gl~v~GtT--GE~~~Ls~eEr~~vi~~~~~~~~grvpVi 85 (314)
T 3d0c_A 12 FSTISGINIVPFLEGTREIDWKGLDDNVEFLLQ----NGIEVIVPNGNT--GEFYALTIEEAKQVATRVTELVNGRATVV 85 (314)
T ss_dssp GSSEEECCCCCBCTTTCCBCHHHHHHHHHHHHH----TTCSEECTTSGG--GTGGGSCHHHHHHHHHHHHHHHTTSSEEE
T ss_pred CCceEEeeeccccCCCCCCCHHHHHHHHHHHHH----cCCCEEEECccc--CChhhCCHHHHHHHHHHHHHHhCCCCeEE
Confidence 345333333 66 77899999998887764322 356666653332 235678889999999887764 46777
Q ss_pred Ee
Q 018243 175 ID 176 (359)
Q Consensus 175 ~D 176 (359)
+=
T Consensus 86 aG 87 (314)
T 3d0c_A 86 AG 87 (314)
T ss_dssp EE
T ss_pred ec
Confidence 63
No 276
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=46.17 E-value=68 Score=27.55 Aligned_cols=105 Identities=10% Similarity=0.045 Sum_probs=60.6
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc-CcEEEEecccccchhhhcCchhHhhh
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH-GLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~-~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
++++++.+++-..+. .+..++++..+..+|+ ....-+|..|-.+.+.+ +++| .|..|..|. ...+.....
T Consensus 169 Tl~Ei~~Ave~i~~~---Gn~~iiLlhc~s~YPt--p~~~~nL~aI~~Lk~~f~~lpV-G~SdHt~G~---~~~~~AAvA 239 (385)
T 1vli_A 169 EISDVHEAWRTIRAE---GNNQIAIMHCVAKYPA--PPEYSNLSVIPMLAAAFPEAVI-GFSDHSEHP---TEAPCAAVR 239 (385)
T ss_dssp CHHHHHHHHHHHHTT---TCCCEEEEEECSSSSC--CGGGCCTTHHHHHHHHSTTSEE-EEEECCSSS---SHHHHHHHH
T ss_pred CHHHHHHHHHHHHHC---CCCcEEEEeccCCCCC--ChhhcCHHHHHHHHHHcCCCCE-EeCCCCCCc---hHHHHHHHH
Confidence 677776666432111 1235666655555565 33345688888888888 8776 676665542 123344455
Q ss_pred cCccEEE--EeccccCCCceeeEEecCHHHHHHHHHH
Q 018243 196 QAADSAS--VCLSKGLGAPVGSVIVGSKEFIKKARRL 230 (359)
Q Consensus 196 ~~~d~~~--~s~~K~~g~~~gg~~~~~~~~~~~~~~~ 230 (359)
.+++++= +++.|.+.++-+..-+.++++.+-++..
T Consensus 240 lGA~iIEkHftldra~~G~D~~~SL~P~ef~~lv~~i 276 (385)
T 1vli_A 240 LGAKLIEKHFTIDKNLPGADHSFALNPDELKEMVDGI 276 (385)
T ss_dssp TTCSEEEEEBCSCTTSSCSSCTTSBCHHHHHHHHHHH
T ss_pred cCCCEEEeCCCccccCCCCchhhhCCHHHHHHHHHHH
Confidence 6888664 3788888665554344455554444433
No 277
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=45.60 E-value=22 Score=30.60 Aligned_cols=81 Identities=9% Similarity=-0.039 Sum_probs=48.3
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc
Q 018243 110 NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV 189 (359)
Q Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 189 (359)
.+.|+..++++..+.++.. ....+.+++-|.. .++++.+.++.++.+++|..||.. + .. .
T Consensus 193 vDaN~~~~~~~A~~~~~~l------~~~~i~~iEeP~~--------~~d~~~~~~l~~~~~ipIa~dE~~-~-~~----~ 252 (378)
T 4hpn_A 193 IDANHGYTVTEAITLGDRA------AGFGIDWFEEPVV--------PEQLDAYARVRAGQPIPVAGGETW-H-GR----Y 252 (378)
T ss_dssp EECTTCCCHHHHHHHHHHH------GGGCCSCEECCSC--------TTCHHHHHHHHHHSSSCEEECTTC-C-HH----H
T ss_pred EecCcccCHHHHHHHHhhh------hhcccchhhcCCC--------ccchhhhHHHHhhCCceeeCCcCc-c-ch----H
Confidence 3455556776655544432 2334556766543 346788888999999999999862 1 11 1
Q ss_pred hhHhh--hcCccEEEEeccccCC
Q 018243 190 PVRRL--VQAADSASVCLSKGLG 210 (359)
Q Consensus 190 ~~~~~--~~~~d~~~~s~~K~~g 210 (359)
.+..+ ...+|++..-.+|+.|
T Consensus 253 ~~~~~i~~~a~d~i~~d~~~~GG 275 (378)
T 4hpn_A 253 GMWQALSAGAVDILQPDLCGCGG 275 (378)
T ss_dssp HHHHHHHTTCCSEECCBTTTTTH
T ss_pred hHHHHHHcCCCCEEeeCCeeCCC
Confidence 12222 1367888778778533
No 278
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=45.26 E-value=13 Score=24.85 Aligned_cols=20 Identities=25% Similarity=0.243 Sum_probs=17.9
Q ss_pred HHHHHHHHHHcCcEEEEecc
Q 018243 159 TDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a 178 (359)
-.+|+++|+++|++++.|-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (98)
T 3c01_E 29 ALAVRAYAEKVGVPVIVDIK 48 (98)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCeecCHH
Confidence 58899999999999999963
No 279
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=45.11 E-value=15 Score=30.74 Aligned_cols=62 Identities=15% Similarity=0.041 Sum_probs=43.7
Q ss_pred ecC-CCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEEe
Q 018243 109 KNN-QDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHID 176 (359)
Q Consensus 109 ~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~D 176 (359)
|.+ +++.+|.+.+++.++...+ .++..+++..+.. -+..++.++..++.+.+.+. .++||+=
T Consensus 21 Pf~~~dg~iD~~~l~~lv~~li~----~Gv~gl~v~GtTG--E~~~Ls~~Er~~v~~~~~~~~~grvpviaG 86 (318)
T 3qfe_A 21 FFDSKTDTLDLASQERYYAYLAR----SGLTGLVILGTNA--EAFLLTREERAQLIATARKAVGPDFPIMAG 86 (318)
T ss_dssp CEETTTTEECHHHHHHHHHHHHT----TTCSEEEESSGGG--TGGGSCHHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred CccCCCCCCCHHHHHHHHHHHHH----cCCCEEEeCcccc--ChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 666 7899999998888774322 4566777634333 35678889999999988765 4677763
No 280
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=44.90 E-value=13 Score=30.91 Aligned_cols=61 Identities=16% Similarity=0.095 Sum_probs=42.8
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc----CcEEEEe
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH----GLKLHID 176 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~----~~~li~D 176 (359)
|. +++.+|.+.+++.++...+ .++..+++..+. .-+..++.++..++.+.+.+. .+++|+=
T Consensus 19 Pf-~dg~iD~~~l~~lv~~li~----~Gv~gl~v~Gtt--GE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaG 83 (301)
T 3m5v_A 19 PF-KNGKVDEQSYARLIKRQIE----NGIDAVVPVGTT--GESATLTHEEHRTCIEIAVETCKGTKVKVLAG 83 (301)
T ss_dssp CE-ETTEECHHHHHHHHHHHHH----TTCCEEECSSTT--TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEE
T ss_pred Cc-CCCCCCHHHHHHHHHHHHH----cCCCEEEECccc--cChhhCCHHHHHHHHHHHHHHhCCCCCeEEEe
Confidence 66 7889999998888764322 456677763333 235678889999999988765 4777773
No 281
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=44.54 E-value=23 Score=29.94 Aligned_cols=84 Identities=15% Similarity=0.111 Sum_probs=47.9
Q ss_pred eeecCCCCCC-CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhh
Q 018243 107 TVKNNQDGTM-DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAV 185 (359)
Q Consensus 107 ~v~~~~~~~~-~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~ 185 (359)
.+..+.|+.. |.++..+.+++. ....+.+++-|.. .++++.+.+++++.+++|..||.- + ...
T Consensus 175 ~l~vDaN~~~t~~~~A~~~~~~l------~~~~i~~iEeP~~--------~~d~~~~~~l~~~~~ipIa~dE~~-~-~~~ 238 (338)
T 3ijl_A 175 PIAVDANQGWKDRQYALDMIHWL------KEKGIVMIEQPMP--------KEQLDDIAWVTQQSPLPVFADESL-Q-RLG 238 (338)
T ss_dssp CEEEECTTCCCCHHHHHHHHHHH------HHTTEEEEECCSC--------TTCHHHHHHHHHTCSSCEEESTTC-C-SGG
T ss_pred cEEEECcCCCCCHHHHHHHHHHH------hhCCCCEEECCCC--------CCcHHHHHHHHhcCCCCEEECCCC-C-CHH
Confidence 3344556666 465443333321 1234667766543 345788888888889999999862 1 111
Q ss_pred hcCchhHhhhcCccEEEEeccccCC
Q 018243 186 ALGVPVRRLVQAADSASVCLSKGLG 210 (359)
Q Consensus 186 ~~~~~~~~~~~~~d~~~~s~~K~~g 210 (359)
.+..+...+|++..-.+|+-|
T Consensus 239 ----~~~~~~~a~d~i~~k~~~~GG 259 (338)
T 3ijl_A 239 ----DVAALKGAFTGINIKLMKCTG 259 (338)
T ss_dssp ----GTGGGBTTBSEEEECHHHHTS
T ss_pred ----HHHHHHhhCCEEEecccccCC
Confidence 122222467777777777533
No 282
>3m05_A Uncharacterized protein PEPE_1480; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 3.15A {Pediococcus pentosaceus}
Probab=44.35 E-value=43 Score=23.03 Aligned_cols=48 Identities=17% Similarity=0.142 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHhcCceec----cCC---CcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018243 302 LYAACLLKKLEEHGVLVM----PES---STRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 302 ~~~~~~~~~l~~~gi~~~----~~~---~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
.+.+++.+.|.+.|+... .++ .+..++-+ ..+++++++.+++|.+..+
T Consensus 16 ~kld~V~~AL~~~G~~~t~v~~~gGf~r~g~~~lei--vV~De~Vd~vi~~I~~~a~ 70 (114)
T 3m05_A 16 KDANYLSDQFIDQNVRATKLSTTGGFLQSGNTTFMI--GIEEERVPEVLEIIKKASH 70 (114)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEEE--EEEGGGHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCEEEEEEeccccccCCEEEEE--EEcHHHHHHHHHHHHHHcC
Confidence 378899999999998761 111 22355555 5789999999999998764
No 283
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=44.18 E-value=6.8 Score=32.23 Aligned_cols=60 Identities=8% Similarity=0.039 Sum_probs=40.8
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEe
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
|.++++.+|.+.+++.++...+ . +..+++..+. .-+..++.+|..++.+.+.+ .+++|+=
T Consensus 9 Pf~~dg~iD~~~l~~lv~~li~----~-v~gl~v~Gtt--GE~~~Ls~~Er~~v~~~~~~-rvpviaG 68 (283)
T 2pcq_A 9 PFDREGRLDEEAFRELAQALEP----L-VDGLLVYGSN--GEGVHLTPEERARGLRALRP-RKPFLVG 68 (283)
T ss_dssp CBCTTCCBCHHHHHHHHHHHGG----G-SSCCEETCTT--TTGGGSCHHHHHHHHHTCCC-SSCCEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHh----h-CCEEEECCcC--cCchhcCHHHHHHHHHHHHh-CCcEEEe
Confidence 5567889999988888874322 3 4456652322 23567888899999998877 6666654
No 284
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=43.95 E-value=26 Score=29.47 Aligned_cols=32 Identities=25% Similarity=0.295 Sum_probs=27.2
Q ss_pred ccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 146 HANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 146 ~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
..+|.+-..+.+++.++++.|+++|+.+++|-
T Consensus 49 w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~ 80 (332)
T 1hjs_A 49 WVNPADGNYNLDYNIAIAKRAKAAGLGVYIDF 80 (332)
T ss_dssp CSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred eeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 45577777788889999999999999999994
No 285
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=43.42 E-value=20 Score=29.60 Aligned_cols=61 Identities=21% Similarity=0.186 Sum_probs=41.6
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEEe
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHID 176 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~D 176 (359)
|.+ ++.+|.+.+++.++...+ .++..+++..+.. -+..++.+|..++.+.+.+. .+++|+=
T Consensus 12 Pf~-dg~iD~~~l~~lv~~li~----~Gv~gl~~~GttG--E~~~Ls~~Er~~v~~~~~~~~~grvpviaG 75 (294)
T 2ehh_A 12 PFK-EGEVDYEALGNLIEFHVD----NGTDAILVCGTTG--ESPTLTFEEHEKVIEFAVKRAAGRIKVIAG 75 (294)
T ss_dssp CEE-TTEECHHHHHHHHHHHHT----TTCCEEEESSTTT--TGGGSCHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CcC-CCCcCHHHHHHHHHHHHH----CCCCEEEECcccc--ChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 556 788999988888764322 4566777633332 35678889999999988764 3666654
No 286
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=42.71 E-value=8.6 Score=31.94 Aligned_cols=61 Identities=8% Similarity=0.015 Sum_probs=41.9
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEE
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHI 175 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~ 175 (359)
|.++++.+|.+.+++.++...+ .++..+++..+. .=+..++.++..++.+.+.+. .+++|+
T Consensus 15 Pf~~dg~iD~~~l~~lv~~li~----~Gv~gl~v~Gtt--GE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (300)
T 3eb2_A 15 PVDAEGRVRADVMGRLCDDLIQ----AGVHGLTPLGST--GEFAYLGTAQREAVVRATIEAAQRRVPVVA 78 (300)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHH----TTCSCBBTTSGG--GTGGGCCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHH----cCCCEEEECccc--cCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 6778899999998888774322 355566653322 235678889999999988765 456665
No 287
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=42.31 E-value=41 Score=23.94 Aligned_cols=48 Identities=8% Similarity=0.025 Sum_probs=33.7
Q ss_pred HHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 120 LIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 120 ~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
++.+.|.+ .++.+|+. .+. |.+.-....|...|++.|..|+++++.--
T Consensus 65 ~I~d~I~~-------geIdlVIn--t~~-pl~~~~h~~D~~~IrR~A~~~~IP~~T~l 112 (134)
T 2xw6_A 65 QMGARVAE-------GRILAVIF--FRD-PLTAQPHEPDVQALLRVCDVHGVPLATNP 112 (134)
T ss_dssp HHHHHHHT-------TCEEEEEE--ECC-TTTCCTTSCCSHHHHHHHHHHTCCEECSH
T ss_pred hHHHHHHC-------CCccEEEE--ccC-cccCCCccchHHHHHHHHHHcCCCeEcCH
Confidence 56677775 67777776 333 44532215678999999999999988763
No 288
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=42.15 E-value=31 Score=28.30 Aligned_cols=78 Identities=13% Similarity=0.068 Sum_probs=42.7
Q ss_pred cCCeEEecCCCcceeeccccccccCCccceeee-cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecC
Q 018243 77 RGSEVILGDNSHIHIYENGGISTIGGVHPRTVK-NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLS 155 (359)
Q Consensus 77 ~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~ 155 (359)
++..+++..+.|.. + ++.+|++.+.+. ......++..+|.+.++...+ .++++|+.++..+ +
T Consensus 178 ~~~~~v~~H~af~Y-f-----~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~----~~v~~if~e~~~~-~------ 240 (286)
T 3gi1_A 178 RSKTFVTQHTAFSY-L-----AKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKE----YNVKTIFAEDNVN-P------ 240 (286)
T ss_dssp SCCEEEEEESCCHH-H-----HHHTTCEEEEEECSCC---CCHHHHHHHHHHHHH----TTCCEEEECTTSC-T------
T ss_pred CCCEEEEECCchHH-H-----HHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHH----cCCCEEEEeCCCC-h------
Confidence 46667777766332 1 666787776652 333344555555544432110 5788888855443 1
Q ss_pred hhhHHHHHHHHHHcCcEEEE
Q 018243 156 VEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~ 175 (359)
+-+..++++.|+.+++
T Consensus 241 ----~~~~~la~~~g~~v~~ 256 (286)
T 3gi1_A 241 ----KIAHAIAKSTGAKVKT 256 (286)
T ss_dssp ----HHHHHHHHTTTCEEEE
T ss_pred ----HHHHHHHHHhCCeEEE
Confidence 2233467788887764
No 289
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=42.07 E-value=1.2e+02 Score=24.40 Aligned_cols=55 Identities=13% Similarity=0.144 Sum_probs=29.6
Q ss_pred CCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCc
Q 018243 101 GGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGL 171 (359)
Q Consensus 101 ~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~ 171 (359)
.+++++..+.. |.+.+.+.++. +..|+.......+ ..........+.+.|++.|+
T Consensus 44 ~~v~~~~~D~~-----d~~~l~~~~~~---------~d~vi~~a~~~~~--~~~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 44 GKVSVRQLDYF-----NQESMVEAFKG---------MDTVVFIPSIIHP--SFKRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp TTBEEEECCTT-----CHHHHHHHTTT---------CSEEEECCCCCCS--HHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEcCCC-----CHHHHHHHHhC---------CCEEEEeCCCCcc--chhhHHHHHHHHHHHHHcCC
Confidence 34444444443 88889988873 3344431211111 11112445778888888875
No 290
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=41.79 E-value=72 Score=27.01 Aligned_cols=102 Identities=6% Similarity=-0.039 Sum_probs=60.9
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc-CcEEEEecccccchhhhcCchhHhhh
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH-GLKLHIDGARIFNAAVALGVPVRRLV 195 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~-~~~li~D~a~~~~~~~~~~~~~~~~~ 195 (359)
++++++.+++-..+ .+..++++..+..+|+ ....-+|..|-.+.+.+ +++| .|..|..|. ..+.....
T Consensus 159 t~~Ei~~Ave~i~~----~G~~iiLlhc~s~Yp~--~~~~~nL~ai~~lk~~f~~lpV-g~sdHt~G~----~~~~AAvA 227 (349)
T 2wqp_A 159 SIESIKKSVEIIRE----AGVPYALLHCTNIYPT--PYEDVRLGGMNDLSEAFPDAII-GLSDHTLDN----YACLGAVA 227 (349)
T ss_dssp CHHHHHHHHHHHHH----HTCCEEEEECCCCSSC--CGGGCCTHHHHHHHHHCTTSEE-EEECCSSSS----HHHHHHHH
T ss_pred CHHHHHHHHHHHHH----cCCCEEEEeccCCCCC--ChhhcCHHHHHHHHHHCCCCCE-EeCCCCCcH----HHHHHHHH
Confidence 77777666652211 1125677655555565 33345688888888888 8877 577666552 23444555
Q ss_pred cCccEEE--EeccccCCCceeeEEecCHHHHHHHHH
Q 018243 196 QAADSAS--VCLSKGLGAPVGSVIVGSKEFIKKARR 229 (359)
Q Consensus 196 ~~~d~~~--~s~~K~~g~~~gg~~~~~~~~~~~~~~ 229 (359)
.++|++= +++.|.+.++-+..-+.++++.+-++.
T Consensus 228 lGA~iIEkH~tld~a~~G~D~~~SL~p~ef~~lv~~ 263 (349)
T 2wqp_A 228 LGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQG 263 (349)
T ss_dssp HTCCEEEEEBCSCTTCCSTTGGGCBCHHHHHHHHHH
T ss_pred hCCCEEEeCCCccccCCCCChhhhCCHHHHHHHHHH
Confidence 6888764 378888866655434445555444433
No 291
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=41.52 E-value=15 Score=30.65 Aligned_cols=61 Identities=8% Similarity=0.111 Sum_probs=41.6
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEEe
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHID 176 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~D 176 (359)
|.+ ++.+|.+.+++.++...+ .++..+++..+.. -+..++.+|..++.+.+.+. .++||+=
T Consensus 24 Pf~-dg~iD~~~l~~lv~~li~----~Gv~gl~v~GtTG--E~~~Ls~eEr~~vi~~~~~~~~grvpViaG 87 (306)
T 1o5k_A 24 PFK-NGELDLESYERLVRYQLE----NGVNALIVLGTTG--ESPTVNEDEREKLVSRTLEIVDGKIPVIVG 87 (306)
T ss_dssp CEE-TTEECHHHHHHHHHHHHH----TTCCEEEESSGGG--TGGGCCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CcC-CCCcCHHHHHHHHHHHHH----cCCCEEEeCcccc--chhhCCHHHHHHHHHHHHHHhCCCCeEEEc
Confidence 556 889999988888764322 3566777634332 35678889999999988764 3666654
No 292
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=41.40 E-value=46 Score=18.52 Aligned_cols=29 Identities=21% Similarity=0.329 Sum_probs=23.1
Q ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 325 RVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 325 ~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
.+||++. ..++.+-+.+...+-+++.++.
T Consensus 3 rvrisit-artkkeaekfaailikvfaelg 31 (62)
T 2gjh_A 3 RVRISIT-ARTKKEAEKFAAILIKVFAELG 31 (62)
T ss_dssp EEEEEEE-CSSHHHHHHHHHHHHHHHHHTT
T ss_pred eEEEEEE-ecchhHHHHHHHHHHHHHHHhC
Confidence 5799987 6778888999888888877653
No 293
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=40.77 E-value=22 Score=29.29 Aligned_cols=55 Identities=13% Similarity=0.027 Sum_probs=39.1
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH 169 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~ 169 (359)
|.++++.+|.+.+++.++...+ .++..+++..+.. -+..++.++..++.+.+.+.
T Consensus 10 Pf~~dg~iD~~~l~~lv~~li~----~Gv~gl~~~GttG--E~~~Ls~eEr~~v~~~~~~~ 64 (293)
T 1w3i_A 10 PFTKDNRIDKEKLKIHAENLIR----KGIDKLFVNGTTG--LGPSLSPEEKLENLKAVYDV 64 (293)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHH----TTCCEEEESSTTT--TGGGSCHHHHHHHHHHHHTT
T ss_pred CCCCCCCcCHHHHHHHHHHHHH----cCCCEEEECcccc--ChhhCCHHHHHHHHHHHHHH
Confidence 5667899999998888764322 3566677633332 35678889999999998876
No 294
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=40.15 E-value=68 Score=21.28 Aligned_cols=43 Identities=7% Similarity=0.170 Sum_probs=29.8
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEE
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 175 (359)
.++..+.+++ .+.++|++.+-.. ......+..+|++++++++.
T Consensus 23 ~~~v~kai~~-------gka~lViiA~D~~--------~~~~~~i~~~c~~~~ip~~~ 65 (101)
T 3on1_A 23 EEQVVKAVQN-------GQVTLVILSSDAG--------IHTKKKLLDKCGSYQIPVKV 65 (101)
T ss_dssp HHHHHHHHHT-------TCCSEEEEETTSC--------HHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHc-------CCCcEEEEeCCCC--------HHHHHHHHHHHHHcCCCEEE
Confidence 4566777775 6778888733332 22467888999999998764
No 295
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=40.10 E-value=61 Score=27.45 Aligned_cols=80 Identities=15% Similarity=0.106 Sum_probs=49.1
Q ss_pred CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch
Q 018243 111 NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP 190 (359)
Q Consensus 111 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~ 190 (359)
+.++..++++..+.++.. ....+.+++-|.. .++++.+.++.++.+++|..||.- + .. ..
T Consensus 189 Dan~~~~~~~a~~~~~~L------~~~~i~~iEqP~~--------~~d~~~~~~l~~~~~iPIa~dE~~-~-~~----~~ 248 (354)
T 3jva_A 189 DANQAWTPKDAVKAIQAL------ADYQIELVEQPVK--------RRDLEGLKYVTSQVNTTIMADESC-F-DA----QD 248 (354)
T ss_dssp ECTTCSCHHHHHHHHHHT------TTSCEEEEECCSC--------TTCHHHHHHHHHHCSSEEEESTTC-C-SH----HH
T ss_pred ECCCCCCHHHHHHHHHHH------HhcCCCEEECCCC--------hhhHHHHHHHHHhCCCCEEEcCCc-C-CH----HH
Confidence 445566777655555432 2345677875442 345788888888889999999961 1 11 11
Q ss_pred hHhhh--cCccEEEEeccccCC
Q 018243 191 VRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 191 ~~~~~--~~~d~~~~s~~K~~g 210 (359)
...+. ..+|++..-.+|+-|
T Consensus 249 ~~~~l~~~~~d~v~~k~~~~GG 270 (354)
T 3jva_A 249 ALELVKKGTVDVINIKLMKCGG 270 (354)
T ss_dssp HHHHHHHTCCSEEEECHHHHTS
T ss_pred HHHHHHcCCCCEEEECchhcCC
Confidence 22221 367888888888544
No 296
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=40.03 E-value=59 Score=23.71 Aligned_cols=47 Identities=6% Similarity=0.015 Sum_probs=34.4
Q ss_pred HHHHHhcCCCCCccCCceeEEEEeccccCCCceecC-hhhHHHHHHHHHHcCcEEEEec
Q 018243 120 LIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLS-VEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 120 ~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~-~~~l~~i~~~~~~~~~~li~D~ 177 (359)
++.+.+.+ .++.+|+. .+. |.| .-+ ..|...|++.|..|+++++.--
T Consensus 73 ~I~d~I~~-------geIdlVIn--t~~-pl~-~~~h~~D~~~IrR~A~~~~IP~~T~l 120 (152)
T 1b93_A 73 QVGALISE-------GKIDVLIF--FWD-PLN-AVPHDPDVKALLRLATVWNIPVATNV 120 (152)
T ss_dssp HHHHHHHT-------TCCCEEEE--ECC-TTS-CCTTHHHHHHHHHHHHHTTCCEESSH
T ss_pred hHHHHHHC-------CCccEEEE--cCC-ccc-CCcccccHHHHHHHHHHcCCCEEeCH
Confidence 56777775 67777775 333 445 334 6789999999999999988763
No 297
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=40.01 E-value=1.3e+02 Score=23.71 Aligned_cols=51 Identities=12% Similarity=0.050 Sum_probs=26.5
Q ss_pred CChHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCC
Q 018243 36 HDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNS 87 (359)
Q Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~ 87 (359)
..+....+-..+....+....+=+.+|+......+...+ .++.+|+..+.+
T Consensus 44 i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~-~~~~~v~~iD~~ 94 (242)
T 3r3h_A 44 VAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLAL-PDDGQVITCDIN 94 (242)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTS-CTTCEEEEEECC
T ss_pred cCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhC-CCCCEEEEEECC
Confidence 345555665666666665555444444443333444444 245677765554
No 298
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=39.39 E-value=20 Score=29.47 Aligned_cols=55 Identities=13% Similarity=0.114 Sum_probs=38.5
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH 169 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~ 169 (359)
|.++++.+|.+.+++.++...+ .++..+++..+. .-+..++.++..++.+.+.+.
T Consensus 10 Pf~~dg~iD~~~l~~lv~~li~----~Gv~gl~v~GtT--GE~~~Ls~eEr~~v~~~~~~~ 64 (288)
T 2nuw_A 10 PFDKQGKVNVDALKTHAKNLLE----KGIDAIFVNGTT--GLGPALSKDEKRQNLNALYDV 64 (288)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHH----TTCCEEEETSTT--TTGGGSCHHHHHHHHHHHTTT
T ss_pred CCCCCCCcCHHHHHHHHHHHHH----cCCCEEEECccc--cChhhCCHHHHHHHHHHHHHH
Confidence 5667889999988887764322 356677763333 235678889999999988775
No 299
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=39.33 E-value=1.3e+02 Score=23.20 Aligned_cols=123 Identities=10% Similarity=0.009 Sum_probs=60.8
Q ss_pred CChHHHHHHHHHHHHhCCC---CeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccc-cccccCCcc--ceeee
Q 018243 36 HDPTAFRLETEMAKVMGKE---AGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENG-GISTIGGVH--PRTVK 109 (359)
Q Consensus 36 ~~~~~~~l~~~la~~~~~~---~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~g~~--~~~v~ 109 (359)
..+....+-..++...+.. ..+=+.+|+......+.... .++.+|+..+.+-. ....+ ......|.. -+.+.
T Consensus 37 i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~-~~~~~v~~vD~~~~-~~~~a~~~~~~~g~~~~~i~~~ 114 (221)
T 3dr5_A 37 PDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGL-ADNTTLTCIDPESE-HQRQAKALFREAGYSPSRVRFL 114 (221)
T ss_dssp CCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHS-CTTSEEEEECSCHH-HHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhC-CCCCEEEEEECCHH-HHHHHHHHHHHcCCCcCcEEEE
Confidence 4566677777777777665 44555666555444444444 25667777666522 22101 112223432 12222
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEeccc
Q 018243 110 NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGAR 179 (359)
Q Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~ 179 (359)
.. |..++...+.. ....+|++..... .. .+.++.+.++.+. |.++++|++.
T Consensus 115 ~g-----da~~~l~~~~~-------~~fD~V~~d~~~~----~~--~~~l~~~~~~Lkp-GG~lv~dn~~ 165 (221)
T 3dr5_A 115 LS-----RPLDVMSRLAN-------DSYQLVFGQVSPM----DL--KALVDAAWPLLRR-GGALVLADAL 165 (221)
T ss_dssp CS-----CHHHHGGGSCT-------TCEEEEEECCCTT----TH--HHHHHHHHHHEEE-EEEEEETTTT
T ss_pred Ec-----CHHHHHHHhcC-------CCcCeEEEcCcHH----HH--HHHHHHHHHHcCC-CcEEEEeCCC
Confidence 22 44443333311 4567888744322 11 1234454444433 6678888874
No 300
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=39.21 E-value=57 Score=24.88 Aligned_cols=42 Identities=10% Similarity=0.091 Sum_probs=30.9
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEE
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 175 (359)
+.++|++.++ .....+++- +|.+. .++++.+.++++|-.+++
T Consensus 18 ~~~~l~~al~--------s~~~~ifll------~g~i~---~l~~~v~~lk~~~K~v~V 59 (192)
T 3kts_A 18 NQKDMEKILE--------LDLTYMVML------ETHVA---QLKALVKYAQAGGKKVLL 59 (192)
T ss_dssp SSHHHHHHTT--------SSCCEEEEC------SEETT---THHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHc--------CCCCEEEEe------cCcHH---HHHHHHHHHHHcCCeEEE
Confidence 7889999998 566777771 23333 389999999999866555
No 301
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=38.88 E-value=89 Score=21.70 Aligned_cols=49 Identities=12% Similarity=0.198 Sum_probs=36.6
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEEEecc
Q 018243 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++.++++..++ +++.+|++ .+.. .+.. .+ .++.+..+++|+-+-+-++
T Consensus 48 ~l~~~~l~~ll~--------~~~evlii-GtG~--~~~~~~~----~~~~~~l~~~gI~ve~m~T 97 (122)
T 2ab1_A 48 GVQPADVKEVVE--------KGVQTLVI-GRGM--SEALKVP----SSTVEYLKKHGIDVRVLQT 97 (122)
T ss_dssp CCCHHHHHHHHT--------TCCSEEEE-EECS--SCCSCCC----HHHHHHHHHTTCEEEEECH
T ss_pred HCCHHHHHHHhh--------CCCCEEEE-CCCC--CCccCCC----HHHHHHHHHcCCEEEEeCH
Confidence 368899999988 67888888 4443 2444 44 7778888899988877764
No 302
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=38.79 E-value=78 Score=21.01 Aligned_cols=44 Identities=16% Similarity=0.197 Sum_probs=30.2
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEe
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
.++..+.+++ .+.++|++.+-.. ......+..+|+.++++++.-
T Consensus 24 ~~~v~kai~~-------gka~lViiA~D~~--------~~~~~~i~~~c~~~~vp~~~~ 67 (101)
T 3v7q_A 24 EDLVIKEIRN-------ARAKLVLLTEDAS--------SNTAKKVTDKCNYYKVPYKKV 67 (101)
T ss_dssp HHHHHHHHHT-------TCCSEEEEETTSC--------HHHHHHHHHHHHHTTCCEEEE
T ss_pred hhhhHHHHhc-------CceeEEEEecccc--------ccchhhhcccccccCCCeeee
Confidence 4567777875 6778888733322 224688888999999987653
No 303
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=38.77 E-value=72 Score=24.59 Aligned_cols=38 Identities=24% Similarity=0.173 Sum_probs=27.3
Q ss_pred CceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEE
Q 018243 135 PTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 135 ~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 175 (359)
-.+..|+++-..-|+.|.... +.++.+++++||+.++.
T Consensus 157 l~Pa~vicEiv~~~~dG~mar---~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 157 LQPAGAICEIVSQKDEGSMAH---TDELRVFADEHGLALIT 194 (206)
T ss_dssp SCSBEEEEEBBCSSSTTSBCC---HHHHHHHHHHHTCEEEE
T ss_pred CCceEEEEEEeeeCCCCCcCC---HHHHHHHHHHcCCcEEE
Confidence 356677775532335677766 78899999999998874
No 304
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=38.47 E-value=20 Score=29.50 Aligned_cols=61 Identities=18% Similarity=0.035 Sum_probs=41.2
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEEe
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHID 176 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~D 176 (359)
|.+ ++.+|.+.+++.++...+ .++..+++..+.. -+..++.++..++.+.+.+. .+++|+=
T Consensus 12 Pf~-dg~iD~~~l~~lv~~li~----~Gv~gl~~~GttG--E~~~Ls~~Er~~v~~~~~~~~~gr~pviaG 75 (289)
T 2yxg_A 12 PFK-NKEVDFDGLEENINFLIE----NGVSGIVAVGTTG--ESPTLSHEEHKKVIEKVVDVVNGRVQVIAG 75 (289)
T ss_dssp CEE-TTEECHHHHHHHHHHHHH----TTCSEEEESSTTT--TGGGSCHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CcC-CCCcCHHHHHHHHHHHHH----CCCCEEEECcccc--ChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 556 788999988888764322 3566676633332 35678889999999987764 3666654
No 305
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=38.40 E-value=59 Score=21.51 Aligned_cols=43 Identities=16% Similarity=0.099 Sum_probs=29.6
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEE
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 175 (359)
.++..+.+++ .+.++|++.+- . |.+-...+..+|++++++++.
T Consensus 20 ~~~v~kai~~-------gka~lViiA~D-~-------~~~~~~~i~~~c~~~~ip~~~ 62 (99)
T 3j21_Z 20 SNETIRLAKT-------GGAKLIIVAKN-A-------PKEIKDDIYYYAKLSDIPVYE 62 (99)
T ss_dssp HHHHHHHHHH-------TCCSEEEEECC-C-------CHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHc-------CCccEEEEeCC-C-------CHHHHHHHHHHHHHcCCCEEE
Confidence 4566667764 56778887332 1 245578899999999999643
No 306
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=38.29 E-value=71 Score=21.64 Aligned_cols=42 Identities=12% Similarity=0.106 Sum_probs=29.5
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEE
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLH 174 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li 174 (359)
.++..+.+++ .+.++|++ ..+ . |.+-...|..+|++++++++
T Consensus 26 ~~~v~kai~~-------gka~lVii--A~D----~--~~~~~~~l~~~c~~~~Vp~~ 67 (110)
T 3cpq_A 26 SKRTIKFVKH-------GEGKLVVL--AGN----I--PKDLEEDVKYYAKLSNIPVY 67 (110)
T ss_dssp HHHHHHHHHT-------TCCSEEEE--CTT----C--BHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHc-------CCceEEEE--eCC----C--CHHHHHHHHHHHHHcCCCEE
Confidence 4566777775 56778877 232 1 35567889999999999854
No 307
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=37.98 E-value=61 Score=24.95 Aligned_cols=37 Identities=22% Similarity=0.219 Sum_probs=27.6
Q ss_pred CceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEE
Q 018243 135 PTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 135 ~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 175 (359)
-.+..|+++-. .|+.|.... +.++.+++++||+.++.
T Consensus 158 l~Pa~vicEi~-~~~dG~mar---~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 158 LQPAGVICELV-RDEDGLMMR---LDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp SCSBEEEEEBB-CTTTCCBCB---HHHHHHHHHHHTCCEEE
T ss_pred CCceEEEEEEe-ECCCCCcCC---HHHHHHHHHHcCCcEEE
Confidence 45667777544 346788776 78899999999998774
No 308
>1nxi_A Conserved hypothetical protein VC0424; structural genomics, AB sandwich, COG 3076, ATCC NO. 51394D, NESG target OP3, PSI; NMR {Vibrio cholerae} SCOP: d.58.47.1
Probab=37.98 E-value=1e+02 Score=21.70 Aligned_cols=62 Identities=5% Similarity=-0.092 Sum_probs=44.5
Q ss_pred EEEEeccchHHHHHHHHHHHHhcCceecc-------CC-C-cEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Q 018243 292 VYFEITEDSKLYAACLLKKLEEHGVLVMP-------ES-S-TRVRIVVHHQISANDVHYTLSCFQKIYAGVCE 355 (359)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~l~~~gi~~~~-------~~-~-~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 355 (359)
.|+.++. ..++..++..+.+.|..+.. .+ + .++.++.....+.+.|......|.++.+++..
T Consensus 43 H~~~F~d--e~~~e~~a~~~~~~Gy~v~~~~~~e~e~g~~~~~~~i~~~~~l~~~~I~~~~~~L~~lA~~~~G 113 (132)
T 1nxi_A 43 HHLFAED--FDKLEKAAVEAFKMGFEVLEAEETEDEDGNKLLCFDATMQSALDAKLIDEQVEKLVNLAEKFDI 113 (132)
T ss_dssp EEEEESC--HHHHHHHHHHHHHHTCCCBCCCCBCCSSCSSBEEEEEEEEECSCHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEeCC--HHHHHHHHHHHHHCCCEEEecccccCCCCceeEEEEEEEeccCCHHHHHHHHHHHHHHHHHhCc
Confidence 5566665 35888999999888887631 11 2 45777665567888999999999998888754
No 309
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=37.89 E-value=58 Score=27.85 Aligned_cols=80 Identities=10% Similarity=0.133 Sum_probs=47.8
Q ss_pred CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch
Q 018243 111 NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP 190 (359)
Q Consensus 111 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~ 190 (359)
+.++..++++..+.++.. ....+.+++-|.. .++++.+.++.++.+++|..||.- + .. ..
T Consensus 203 Dan~~~~~~~a~~~~~~l------~~~~i~~iEqP~~--------~~d~~~~~~l~~~~~iPIa~dE~~-~-~~----~~ 262 (372)
T 3tj4_A 203 DGNGKWDLPTCQRFCAAA------KDLDIYWFEEPLW--------YDDVTSHARLARNTSIPIALGEQL-Y-TV----DA 262 (372)
T ss_dssp ECTTCCCHHHHHHHHHHT------TTSCEEEEESCSC--------TTCHHHHHHHHHHCSSCEEECTTC-C-SH----HH
T ss_pred eCCCCCCHHHHHHHHHHH------hhcCCCEEECCCC--------chhHHHHHHHHhhcCCCEEeCCCc-c-CH----HH
Confidence 345556776655555432 2334667775432 345788888888889999999962 1 11 11
Q ss_pred hHhh--hcCccEEEEeccccCC
Q 018243 191 VRRL--VQAADSASVCLSKGLG 210 (359)
Q Consensus 191 ~~~~--~~~~d~~~~s~~K~~g 210 (359)
...+ ...+|++..-.+|+-|
T Consensus 263 ~~~~i~~~~~d~v~~k~~~~GG 284 (372)
T 3tj4_A 263 FRSFIDAGAVAYVQPDVTRLGG 284 (372)
T ss_dssp HHHHHHTTCCSEECCCTTTTTH
T ss_pred HHHHHHcCCCCEEEeCccccCC
Confidence 2222 2357888777777533
No 310
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=37.17 E-value=87 Score=22.68 Aligned_cols=57 Identities=16% Similarity=0.166 Sum_probs=35.2
Q ss_pred CCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecC-hhhHHHHH-HHHHHcCcE-EEEecc
Q 018243 114 GTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLS-VEYTDSVG-EIAKKHGLK-LHIDGA 178 (359)
Q Consensus 114 ~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~-~~~l~~i~-~~~~~~~~~-li~D~a 178 (359)
...+.+.|.+.+++ .++..|++.-|.+ .-|..-. ....++++ .++++.++. ..+||.
T Consensus 40 ~~~~~~~l~~li~~-------~~~~~ivVGlP~~-~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr 99 (150)
T 1vhx_A 40 GDYGLSRLSELIKD-------YTIDKIVLGFPKN-MNGTVGPRGEASQTFAKVLETTYNVPVVLWDER 99 (150)
T ss_dssp TBCCHHHHHHHHTT-------SEEEEEEEECCCC-BTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCS
T ss_pred hHHHHHHHHHHHHH-------cCCCEEEEeeeec-CCcchhHHHHHHHHHHHHHHHhhCCCEEEecCC
Confidence 34588999999997 5788888865554 3344322 23334555 344455655 566996
No 311
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=36.95 E-value=21 Score=31.43 Aligned_cols=28 Identities=21% Similarity=0.199 Sum_probs=24.4
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEe
Q 018243 149 CGGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
+.|..|+.+++++|.+.|+++||-||--
T Consensus 84 ~~~~~YT~~di~eIv~YA~~rgI~VIPE 111 (434)
T 2yl6_A 84 PNGNHLTESQMTDLINYAKDKGIGLIPT 111 (434)
T ss_dssp TTCSCEEHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCccCHHHHHHHHHHHHHcCCEEEEe
Confidence 3466899999999999999999998854
No 312
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=36.93 E-value=22 Score=31.38 Aligned_cols=28 Identities=21% Similarity=0.156 Sum_probs=24.5
Q ss_pred CCceecChhhHHHHHHHHHHcCcEEEEe
Q 018243 149 CGGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 149 ptG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
+.|..|+.+++++|.+.|+++||-||--
T Consensus 87 ~~~~~YT~~di~eIv~YA~~rgI~VIPE 114 (442)
T 2yl5_A 87 PNGTALTQAEVTELIEYAKSKDIGLIPA 114 (442)
T ss_dssp TTCSCBCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHcCCeeeee
Confidence 4466899999999999999999998854
No 313
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=36.34 E-value=72 Score=19.76 Aligned_cols=32 Identities=19% Similarity=0.315 Sum_probs=25.4
Q ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 322 SSTRVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 322 ~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
+...+||++. ..++.+-+.+...|-+++.++.
T Consensus 44 gakrvrisit-artkkeaekfaailikvfaelg 75 (106)
T 1qys_A 44 GAKRVRISIT-ARTKKEAEKFAAILIKVFAELG 75 (106)
T ss_dssp CCSEEEEEEE-CSSHHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEEEE-ecchhHHHHHHHHHHHHHHHhC
Confidence 4678899987 6788889999888888777653
No 314
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=35.91 E-value=83 Score=25.70 Aligned_cols=48 Identities=23% Similarity=0.171 Sum_probs=33.5
Q ss_pred CCCCCCCH-----HHHHHHhcCCCCCccCCceeEEEEeccccCCCcee-cChhhHHHHHHHHHHcCcEEE
Q 018243 111 NQDGTMDI-----DLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRC-LSVEYTDSVGEIAKKHGLKLH 174 (359)
Q Consensus 111 ~~~~~~~~-----~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~-~~~~~l~~i~~~~~~~~~~li 174 (359)
..|..+|+ +.++...+ .+.+.|++++ +|.+ .. -+++.+.|+++|+.++
T Consensus 222 ~qD~~fd~P~iG~dti~~~~~--------ag~~~ivi~~-----g~si~~~---~~~~i~~a~~~gi~~~ 275 (283)
T 4ggi_A 222 IQETRVALPTIGVATIHRAAR--------AGLAGIVGEA-----GRLLVVD---REAVIAAADDLGLFVL 275 (283)
T ss_dssp C---CCCCCEECHHHHHHHHH--------TTCCEEEEET-----TBCEETT---HHHHHHHHHHHTCEEE
T ss_pred ccccccCCccccHHHHHHHHH--------cCCeEEEEcC-----CCcEEeC---HHHHHHHHHHcCCEEE
Confidence 34555555 88888888 6888887733 3454 34 5899999999999877
No 315
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=35.62 E-value=30 Score=29.63 Aligned_cols=26 Identities=27% Similarity=0.316 Sum_probs=23.2
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEe
Q 018243 151 GRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
+..|+.+++++|.+.|+++|+-||--
T Consensus 89 ~g~YT~~di~eiv~YA~~rgI~VIPE 114 (367)
T 1yht_A 89 KPFLSYRQLDDIKAYAKAKGIELIPE 114 (367)
T ss_dssp CEEBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCEEEEe
Confidence 46799999999999999999998854
No 316
>2qlc_A DNA repair protein RADC homolog; MCSG, structural genomics, PSI-2, structure initiative; HET: DNA; 2.30A {Chlorobium tepidum tls}
Probab=35.51 E-value=81 Score=22.08 Aligned_cols=44 Identities=18% Similarity=0.251 Sum_probs=25.4
Q ss_pred HHHHHHhcCCCCCccCCceeEEEEeccccCCCceecCh-hhHH---HHHHHHHHcCcE
Q 018243 119 DLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSV-EYTD---SVGEIAKKHGLK 172 (359)
Q Consensus 119 ~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~-~~l~---~i~~~~~~~~~~ 172 (359)
+-++.++. .+...|++.|.+ |.|...|. +|++ ++.+.++--|+.
T Consensus 58 ei~~~Al~--------~~A~~vIl~HNH--PSG~~~PS~~D~~~T~~l~~a~~ll~I~ 105 (126)
T 2qlc_A 58 EIFKAAIR--------ESAHSIILVHNH--PSGDVQPSNADKQVTSILKKAGDLLQIE 105 (126)
T ss_dssp HHHHHHHH--------TTCSEEEEEEEC--SSSCCSCCHHHHHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHH--------cCCcEEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHCCCe
Confidence 45677787 566677773433 88887655 4443 344444444543
No 317
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=35.18 E-value=41 Score=28.78 Aligned_cols=79 Identities=8% Similarity=0.015 Sum_probs=45.3
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCccCCce-eEEEEeccccCCCceecChhhHHHHHHHHHHcC--cEEEEecccccchhhh
Q 018243 110 NNQDGTMDIDLIEAAIRDPKGEIVYPTT-RLICLENTHANCGGRCLSVEYTDSVGEIAKKHG--LKLHIDGARIFNAAVA 186 (359)
Q Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~--~~li~D~a~~~~~~~~ 186 (359)
.+.|+..++++..+.+++. .+. .+.+++-|.. .++++.+.+++++.+ ++|..||.. ....
T Consensus 193 vDaN~~~~~~~a~~~~~~l------~~~~~i~~iEqP~~--------~~d~~~~~~l~~~~~~~ipIa~dE~~--~~~~- 255 (372)
T 3cyj_A 193 VDANGAYTRKQALYWAGAF------AREAGISYLEEPVS--------SEDREGLRLLRDRGPGGVAIAAGEYE--WTLP- 255 (372)
T ss_dssp EECTTCSCHHHHHHHHHHH------HHHHCCCEEECSSC--------TTCHHHHHHHHHHSCTTCEEEECTTC--CSHH-
T ss_pred EECCCCCCHHHHHHHHHHH------HhhcCCcEEECCCC--------cccHHHHHHHHHhCCCCCCEECCCCc--cCHH-
Confidence 3445555666554444421 123 4567766543 345788888888777 688889862 1111
Q ss_pred cCchhHhhhcCccEEEEecccc
Q 018243 187 LGVPVRRLVQAADSASVCLSKG 208 (359)
Q Consensus 187 ~~~~~~~~~~~~d~~~~s~~K~ 208 (359)
.+..+...+|++..-..|+
T Consensus 256 ---~~~~~~~a~d~i~ik~~~~ 274 (372)
T 3cyj_A 256 ---QLHDLAGCVDILQADVTRC 274 (372)
T ss_dssp ---HHHHHHTTCSEEEECTTTT
T ss_pred ---HHHHHhCCCCEEecCchhh
Confidence 1222234678888877775
No 318
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=34.96 E-value=66 Score=24.14 Aligned_cols=48 Identities=13% Similarity=-0.018 Sum_probs=33.8
Q ss_pred HHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 120 LIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 120 ~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
++.+.|.+ .++.+|+. ++. |.|......|...|++.|..|+++++.--
T Consensus 89 qI~d~I~~-------geIdlVIn--t~d-Pl~~~~h~~D~~~IRR~A~~~~IP~~Tnl 136 (178)
T 1vmd_A 89 QIGAMIAE-------GKIDVLIF--FWD-PLEPQAHDVDVKALIRIATVYNIPVAITR 136 (178)
T ss_dssp HHHHHHHT-------TSCCEEEE--ECC-SSSCCTTSCCHHHHHHHHHHTTCCEESSH
T ss_pred hHHHHHHC-------CCccEEEE--ccC-ccCCCcccccHHHHHHHHHHcCCCEEeCH
Confidence 56777775 67777776 333 44532215679999999999999988763
No 319
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=34.52 E-value=27 Score=30.72 Aligned_cols=23 Identities=17% Similarity=0.127 Sum_probs=21.4
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++++++++.|+++|+.||+|-+
T Consensus 69 ~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 69 EREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeC
Confidence 58899999999999999999976
No 320
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=34.45 E-value=25 Score=29.44 Aligned_cols=23 Identities=26% Similarity=0.192 Sum_probs=20.1
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.+.+++++++|+++|+.+|+|-.
T Consensus 104 ~~~ld~~v~~a~~~Gi~VilD~H 126 (327)
T 3pzt_A 104 KNKVKEAVEAAKELGIYVIIDWH 126 (327)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 36789999999999999999954
No 321
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=34.43 E-value=71 Score=26.33 Aligned_cols=52 Identities=6% Similarity=-0.052 Sum_probs=35.5
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCC----CceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANC----GGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p----tG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
.++|++.+++ .+.+.|-+ ++...+ .+..+..+.++.+.++|+++|+.|++-.
T Consensus 110 ~~el~~~~~~-------~g~~gi~i-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~ 165 (327)
T 2dvt_A 110 TEELQRCVND-------LGFVGALV-NGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLHP 165 (327)
T ss_dssp HHHHHHHHHT-------TCCCEEEE-ESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHhc-------CCceEEEE-CCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeEEECC
Confidence 5677777764 46667765 333211 1455666789999999999999888764
No 322
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=33.74 E-value=82 Score=25.78 Aligned_cols=77 Identities=12% Similarity=0.083 Sum_probs=43.2
Q ss_pred cCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecCh
Q 018243 77 RGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSV 156 (359)
Q Consensus 77 ~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~ 156 (359)
++..+++..+.|.. + ++.+|++.+.+... ...+++.+|.+.++...+ .++++|+.++..+ +
T Consensus 189 ~~~~~v~~H~af~Y-f-----~~~yGl~~~~~~~~-~~eps~~~l~~l~~~ik~----~~v~~If~e~~~~-~------- 249 (291)
T 1pq4_A 189 PQRKFIVFHPSWAY-F-----ARDYNLVQIPIEVE-GQEPSAQELKQLIDTAKE----NNLTMVFGETQFS-T------- 249 (291)
T ss_dssp SCCEEEESSCCCHH-H-----HHHTTCEEEESCBT-TBCCCHHHHHHHHHHHHT----TTCCEEEEETTSC-C-------
T ss_pred CCCEEEEECCchHH-H-----HHHCCCEEeecccC-CCCCCHHHHHHHHHHHHH----cCCCEEEEeCCCC-h-------
Confidence 45678887777332 2 56677776655322 334565555544432111 5788898865554 1
Q ss_pred hhHHHHHHHHHHcCcEEEE
Q 018243 157 EYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~ 175 (359)
+-+..++++.|+.++.
T Consensus 250 ---~~~~~ia~~~g~~v~~ 265 (291)
T 1pq4_A 250 ---KSSEAIAAEIGAGVEL 265 (291)
T ss_dssp ---HHHHHHHHHHTCEEEE
T ss_pred ---HHHHHHHHHcCCeEEE
Confidence 2233457788877654
No 323
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=33.70 E-value=28 Score=31.06 Aligned_cols=23 Identities=4% Similarity=-0.152 Sum_probs=21.3
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++++++++.|+++|+.||+|-+
T Consensus 78 ~~df~~lv~~aH~~Gi~VilD~V 100 (483)
T 3bh4_A 78 KSELQDAIGSLHSRNVQVYGDVV 100 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEc
Confidence 58899999999999999999965
No 324
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=33.68 E-value=48 Score=28.46 Aligned_cols=81 Identities=17% Similarity=0.194 Sum_probs=48.2
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCccCCc--eeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc
Q 018243 110 NNQDGTMDIDLIEAAIRDPKGEIVYPT--TRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL 187 (359)
Q Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~ 187 (359)
.+.|+..++++..+.++.. .. ..+.+++-|.. .++++.+.++.++.+++|..||.- + ..
T Consensus 191 vDaN~~w~~~~A~~~~~~l------~~~~~~l~~iEeP~~--------~~d~~~~~~l~~~~~iPIa~dE~~-~-~~--- 251 (379)
T 3r0u_A 191 FDANQGWNLAQTKQFIEEI------NKYSLNVEIIEQPVK--------YYDIKAMAEITKFSNIPVVADESV-F-DA--- 251 (379)
T ss_dssp EECTTCCCHHHHHHHHHHH------HTSCCCEEEEECCSC--------TTCHHHHHHHHHHCSSCEEESTTC-S-SH---
T ss_pred EeCCCCcCHHHHHHHHHHH------hhcCCCcEEEECCCC--------cccHHHHHHHHhcCCCCEEeCCcc-C-CH---
Confidence 3455666776654444321 12 45677875432 345788888888899999999862 1 11
Q ss_pred CchhHhhh--cCccEEEEeccccCC
Q 018243 188 GVPVRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 188 ~~~~~~~~--~~~d~~~~s~~K~~g 210 (359)
.....+. ..+|++..-.+|+.|
T Consensus 252 -~~~~~~i~~~a~d~v~~k~~~~GG 275 (379)
T 3r0u_A 252 -KDAERVIDEQACNMINIKLAKTGG 275 (379)
T ss_dssp -HHHHHHHHTTCCSEEEECHHHHTS
T ss_pred -HHHHHHHHcCCCCEEEECccccCC
Confidence 1122222 257888888888544
No 325
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=33.65 E-value=28 Score=31.02 Aligned_cols=23 Identities=9% Similarity=-0.078 Sum_probs=21.3
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++++++++.|+++|+.||+|-+
T Consensus 80 ~~df~~lv~~aH~~Gi~VilD~V 102 (480)
T 1ud2_A 80 KAQLERAIGSLKSNDINVYGDVV 102 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEc
Confidence 58899999999999999999966
No 326
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=33.56 E-value=57 Score=28.37 Aligned_cols=54 Identities=13% Similarity=0.063 Sum_probs=33.2
Q ss_pred CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 111 NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 111 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
+.++..++++-.+.++.. ....+.+++-|.. .++++.+.++.++.+++|..||.
T Consensus 238 DaN~~~~~~~A~~~~~~l------~~~~l~~iEqP~~--------~~d~~~~~~l~~~~~iPIa~dE~ 291 (412)
T 4h1z_A 238 DMHWAHTASEAVALIKAM------EPHGLWFAEAPVR--------TEDIDGLARVAASVSTAIAVGEE 291 (412)
T ss_dssp ECCSCCCHHHHHHHHHHH------GGGCEEEEECCSC--------TTCHHHHHHHHHHCSSEEEECTT
T ss_pred ccccCCCHHHHHHHHHhh------cccccceecCCCC--------ccchHHHHHHHhhcCCccccCCc
Confidence 344555665544444321 2334667766543 34678888888888888888886
No 327
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=33.49 E-value=73 Score=21.11 Aligned_cols=43 Identities=12% Similarity=0.095 Sum_probs=29.3
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEE
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 175 (359)
.++..+.+++ .+.++|++.+- . |.+-...+..+|++++++++.
T Consensus 21 ~~~v~kai~~-------gka~lViiA~D-~-------~~~~~~~l~~~c~~~~vp~~~ 63 (101)
T 1w41_A 21 ARKSIQYAKM-------GGAKLIIVARN-A-------RPDIKEDIEYYARLSGIPVYE 63 (101)
T ss_dssp HHHHHHHHHH-------TCCSEEEEETT-S-------CHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHc-------CCCcEEEEeCC-C-------CHHHHHHHHHHHHhcCCCEEE
Confidence 4566666764 56778887332 1 245578888999999998653
No 328
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=33.49 E-value=29 Score=30.12 Aligned_cols=23 Identities=13% Similarity=-0.006 Sum_probs=21.0
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++++++++.|+++|+.||+|-+
T Consensus 68 ~~d~~~lv~~~h~~Gi~VilD~V 90 (405)
T 1ht6_A 68 AAELKSLIGALHGKGVQAIADIV 90 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEC
Confidence 47899999999999999999976
No 329
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=33.37 E-value=29 Score=30.49 Aligned_cols=23 Identities=22% Similarity=0.096 Sum_probs=21.3
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++++++++.|+++|+.||+|-+
T Consensus 86 ~~df~~lv~~~H~~Gi~VilD~V 108 (435)
T 1mxg_A 86 KEELVRLIQTAHAYGIKVIADVV 108 (435)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEC
Confidence 68899999999999999999966
No 330
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=33.33 E-value=28 Score=31.02 Aligned_cols=23 Identities=13% Similarity=0.055 Sum_probs=21.3
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++++++++.|+++|+.||+|-+
T Consensus 82 ~~df~~Lv~~aH~~Gi~VilD~V 104 (485)
T 1wpc_A 82 RSQLQAAVTSLKNNGIQVYGDVV 104 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEe
Confidence 58899999999999999999966
No 331
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=33.18 E-value=28 Score=31.34 Aligned_cols=23 Identities=13% Similarity=0.008 Sum_probs=21.3
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++++++++.|+++|+.||+|-+
T Consensus 81 ~~dfk~Lv~~aH~~Gi~VilD~V 103 (515)
T 1hvx_A 81 KAQYLQAIQAAHAAGMQVYADVV 103 (515)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEe
Confidence 58899999999999999999966
No 332
>3b1s_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.55A {Aquifex aeolicus}
Probab=39.32 E-value=9.1 Score=24.94 Aligned_cols=20 Identities=15% Similarity=0.170 Sum_probs=17.6
Q ss_pred HHHHHHHHHHcCcEEEEecc
Q 018243 159 TDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a 178 (359)
-.+|+++++++|++++.|-.
T Consensus 29 A~~I~e~A~e~~VPi~e~~~ 48 (87)
T 3b1s_B 29 AQKIVEIAENYSIPVVRKPE 48 (87)
Confidence 47899999999999999963
No 333
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=32.74 E-value=86 Score=21.56 Aligned_cols=45 Identities=4% Similarity=0.036 Sum_probs=29.8
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEe
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
.++..+.+++ .+.++|++.+-.+ |-+ -...+..+|++++++++.-
T Consensus 32 ~~~v~kal~~-------gka~lViiA~D~~-~~~------~~~~l~~lc~~~~Vp~~~~ 76 (119)
T 1rlg_A 32 TNETTKAVER-------GLAKLVYIAEDVD-PPE------IVAHLPLLCEEKNVPYIYV 76 (119)
T ss_dssp HHHHHHHHTT-------TCCSEEEEESCCS-CST------TTTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHc-------CCCcEEEEeCCCC-hHH------HHHHHHHHHHHcCCCEEEe
Confidence 4566777775 5677888844333 322 2578888999999886543
No 334
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=32.31 E-value=96 Score=25.16 Aligned_cols=50 Identities=14% Similarity=0.036 Sum_probs=37.6
Q ss_pred CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 113 DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 113 ~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
++-+|..++.+... .+..+|++... .++.++++++.+.|++.|..++++-
T Consensus 127 dfi~d~~qi~ea~~--------~GAD~VlLi~a-------~L~~~~l~~l~~~a~~lGl~~lvev 176 (272)
T 3tsm_A 127 DFLFDPYQVYEARS--------WGADCILIIMA-------SVDDDLAKELEDTAFALGMDALIEV 176 (272)
T ss_dssp SCCCSTHHHHHHHH--------TTCSEEEEETT-------TSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CccCCHHHHHHHHH--------cCCCEEEEccc-------ccCHHHHHHHHHHHHHcCCeEEEEe
Confidence 45567778888776 56677777342 2356789999999999999988885
No 335
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=32.21 E-value=99 Score=26.29 Aligned_cols=49 Identities=12% Similarity=0.268 Sum_probs=28.5
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecC-hhhHHHHHHHHHHcCcEEEE
Q 018243 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLS-VEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~-~~~l~~i~~~~~~~~~~li~ 175 (359)
.++.+.++..++ ...+.|+++.... |...+ .+.++.|.++ .+.|++||.
T Consensus 240 G~~~~~l~a~~~--------~g~~GiVle~~G~---Gn~p~~~~~~~~l~~a-~~~Gi~VV~ 289 (358)
T 2him_A 240 GISADVVRNFLR--------QPVKALILRSYGV---GNAPQNKAFLQELQEA-SDRGIVVVN 289 (358)
T ss_dssp TCCHHHHHHHTS--------SSCSEEEEEEBTT---TBCCCCHHHHHHHHHH-HHTTCEEEE
T ss_pred CCCHHHHHHHHh--------CCCCEEEEecCCC---CCCCCcHHHHHHHHHH-HHCCCEEEE
Confidence 346677777666 5677888866654 55543 2344444444 455765543
No 336
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=32.17 E-value=38 Score=28.41 Aligned_cols=78 Identities=12% Similarity=0.044 Sum_probs=43.4
Q ss_pred CCCCCCCHHHHHHHhcCCCCCccCCce---eEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc
Q 018243 111 NQDGTMDIDLIEAAIRDPKGEIVYPTT---RLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL 187 (359)
Q Consensus 111 ~~~~~~~~~~l~~~l~~~~~~~~~~~~---~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~ 187 (359)
+.|+..+.++..+.++.. .+. .+.+++-|.. .++++.+.+++++.+++|..||.- + ..
T Consensus 167 DaN~~~~~~~A~~~~~~l------~~~~~~~i~~iEqP~~--------~~d~~~~~~l~~~~~ipIa~dEs~-~-~~--- 227 (332)
T 2ozt_A 167 DANGSWDRATANRWFAWL------DRHGNGKIEYVEQPLP--------PDQWQALLSLAQTVTTAIALDESV-V-SA--- 227 (332)
T ss_dssp ECTTCCCHHHHHHHHHHH------HHHCCTTEEEEECCSC--------TTCHHHHHHHHHHCSSCEEESTTC-C-SH---
T ss_pred cccCCCCHHHHHHHHHHH------HhhccCCcceeECCCC--------CCCHHHHHHHHHhCCCCEEeCCCC-C-CH---
Confidence 445555666544444321 122 4667766543 345788888888888899999851 1 11
Q ss_pred CchhHhhh--cCccEEEEecccc
Q 018243 188 GVPVRRLV--QAADSASVCLSKG 208 (359)
Q Consensus 188 ~~~~~~~~--~~~d~~~~s~~K~ 208 (359)
..+..+. ..+|++..-..|.
T Consensus 228 -~~~~~~~~~~a~~~i~ik~~~~ 249 (332)
T 2ozt_A 228 -AEVQRWVDRGWPGFFVIKTALF 249 (332)
T ss_dssp -HHHHHHHHTTCCSEEEECHHHH
T ss_pred -HHHHHHHHhCCCCEEEEChhhh
Confidence 1122221 2457777766775
No 337
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=32.13 E-value=1e+02 Score=20.62 Aligned_cols=43 Identities=14% Similarity=0.106 Sum_probs=30.5
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEE
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLH 174 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li 174 (359)
-.++..+.+++ .+.++|++.. +- +.....++..+|+.++++++
T Consensus 26 G~~~v~kai~~-------gkaklVilA~--D~------~~~~~~~i~~~c~~~~ip~~ 68 (105)
T 3u5e_c 26 GYKSTVKSLRQ-------GKSKLIIIAA--NT------PVLRKSELEYYAMLSKTKVY 68 (105)
T ss_dssp SHHHHHHHHHT-------TCCSEEEECT--TS------CHHHHHHHHHHHHHHTCEEE
T ss_pred CHHHHHHHHHc-------CCceEEEEeC--CC------CHHHHHHHHHHHHHcCCCEE
Confidence 34566777775 6778888722 21 23457889999999999998
No 338
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=32.03 E-value=32 Score=29.61 Aligned_cols=48 Identities=13% Similarity=0.072 Sum_probs=30.8
Q ss_pred hhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh--cCccEEEEeccccCC
Q 018243 157 EYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d~~~~s~~K~~g 210 (359)
++++.+.+++++.+++|..||.- + .. ..+..+. ..+|++..-.+|+.|
T Consensus 231 ~d~~~~~~l~~~~~ipIa~dE~~-~-~~----~~~~~~~~~~a~d~v~~k~~~~GG 280 (381)
T 3fcp_A 231 HDNAALVRLSQQIETAILADEAV-A-TA----YDGYQLAQQGFTGAYALKIAKAGG 280 (381)
T ss_dssp TCHHHHHHHHHHSSSEEEESTTC-C-SH----HHHHHHHHTTCCSEEEECHHHHTS
T ss_pred ccHHHHHHHHHhCCCCEEECCCc-C-CH----HHHHHHHHcCCCCEEEecccccCC
Confidence 45788888888888999999862 1 11 1122222 367888888888544
No 339
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=31.81 E-value=59 Score=27.90 Aligned_cols=48 Identities=21% Similarity=0.302 Sum_probs=30.4
Q ss_pred hhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh--cCccEEEEeccccCC
Q 018243 157 EYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d~~~~s~~K~~g 210 (359)
++++.+.++.++.+++|..||.- + .. .....+. ..+|++..-.+|+.|
T Consensus 232 ~d~~~~~~l~~~~~iPIa~dE~~-~-~~----~~~~~~i~~~~~d~v~~k~~~~GG 281 (383)
T 3i4k_A 232 DDLETLREITRRTNVSVMADESV-W-TP----AEALAVVKAQAADVIALKTTKHGG 281 (383)
T ss_dssp TCHHHHHHHHHHHCCEEEESTTC-S-SH----HHHHHHHHHTCCSEEEECTTTTTS
T ss_pred hhHHHHHHHHhhCCCCEEecCcc-C-CH----HHHHHHHHcCCCCEEEEcccccCC
Confidence 35677777777788888888851 1 11 1122222 368888888888544
No 340
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=31.49 E-value=89 Score=25.96 Aligned_cols=50 Identities=14% Similarity=0.112 Sum_probs=36.4
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
.++|++.+++ .+.+.|-+ ++. ..|..+..+.+..+.++|.++|+.+++-.
T Consensus 126 ~~el~~~~~~-------~g~~Gv~l-~~~--~~~~~l~d~~~~~~~~~~~e~~lpv~iH~ 175 (336)
T 2wm1_A 126 VKEMERCVKE-------LGFPGVQI-GTH--VNEWDLNAQELFPVYAAAERLKCSLFVHP 175 (336)
T ss_dssp HHHHHHHHHT-------SCCSEEEE-ESE--ETTEETTCGGGHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHc-------cCCeEEEE-CCc--CCCCCCCCccHHHHHHHHHHcCCEEEECC
Confidence 4677777753 46777766 332 23566677889999999999999988754
No 341
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=31.48 E-value=96 Score=26.69 Aligned_cols=109 Identities=14% Similarity=0.027 Sum_probs=55.9
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEec-cccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHh
Q 018243 116 MDIDLIEAAIRDPKGEIVYPTTRLICLEN-THANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRR 193 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~-~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~ 193 (359)
.+++++..+++...+. .+..+++++. +...|+- ....-++..+..+.+..+++|++|-+|+.|..... ......
T Consensus 260 ~t~~e~~~Ave~i~~~---Gn~~i~L~~rG~s~yp~~-~~~~ldl~~i~~lk~~~~lpV~~D~th~~G~r~~v~~~a~AA 335 (385)
T 3nvt_A 260 ATIEEFIGAAEYIMSQ---GNGKIILCERGIRTYEKA-TRNTLDISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAA 335 (385)
T ss_dssp CCHHHHHHHHHHHHTT---TCCCEEEEECCBCCSCCS-SSSBCCTTHHHHHHHHBSSCEEEEHHHHHCCGGGHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc---CCCeEEEEECCCCCCCCC-CccccCHHHHHHHHHhcCCCEEEcCCCCCCccchHHHHHHHH
Confidence 4777776666532111 2345666643 3444431 11222578888887788999999998865432211 112334
Q ss_pred hhcCccEEEE----eccccCCCceeeEEecCHHHHHHHHHH
Q 018243 194 LVQAADSASV----CLSKGLGAPVGSVIVGSKEFIKKARRL 230 (359)
Q Consensus 194 ~~~~~d~~~~----s~~K~~g~~~gg~~~~~~~~~~~~~~~ 230 (359)
...++|-+++ ++.|.+ +-+..-+.+.++.+-++.+
T Consensus 336 vA~GA~gl~iE~H~~pd~a~--~D~~~sl~p~el~~lv~~i 374 (385)
T 3nvt_A 336 LAIEADGVMAEVHPDPAVAL--SDSAQQMDIPEFEEFWNAI 374 (385)
T ss_dssp HHTTCSEEEEEBCSCGGGCS--SCTTTSBCHHHHHHHHHHH
T ss_pred HHhCCCEEEEEecCChhhcC--CcccccCCHHHHHHHHHHH
Confidence 4458883332 555655 2332223344444444333
No 342
>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis}
Probab=31.33 E-value=28 Score=24.35 Aligned_cols=20 Identities=20% Similarity=0.293 Sum_probs=17.8
Q ss_pred HHHHHHHHHHcCcEEEEecc
Q 018243 159 TDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a 178 (359)
-.+|+++|+++|++++.|-.
T Consensus 73 A~~I~~~A~e~~VPi~e~~~ 92 (123)
T 2jli_A 73 VQTVRKIAEEEGVPILQRIP 92 (123)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 48899999999999999953
No 343
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=31.31 E-value=1.9e+02 Score=22.56 Aligned_cols=99 Identities=12% Similarity=0.040 Sum_probs=51.2
Q ss_pred hHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEE
Q 018243 63 TMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICL 142 (359)
Q Consensus 63 t~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i 142 (359)
|+++...+..+. ..|.+|++..+.-..... ..++...|.....++.. +.+++.+.+.+.... .+..+|++
T Consensus 26 TT~ll~~~~r~~-~~g~kVli~~~~~d~r~~-~~i~srlG~~~~~~~~~-----~~~~i~~~i~~~~~~---~~~dvViI 95 (223)
T 2b8t_A 26 TAELIRRLHRLE-YADVKYLVFKPKIDTRSI-RNIQSRTGTSLPSVEVE-----SAPEILNYIMSNSFN---DETKVIGI 95 (223)
T ss_dssp HHHHHHHHHHHH-HTTCCEEEEEECCCGGGC-SSCCCCCCCSSCCEEES-----STHHHHHHHHSTTSC---TTCCEEEE
T ss_pred HHHHHHHHHHHH-hcCCEEEEEEeccCchHH-HHHHHhcCCCccccccC-----CHHHHHHHHHHHhhC---CCCCEEEE
Confidence 344444455555 367677766544221111 12344455443333322 345565555532111 35678888
Q ss_pred eccccCCCceecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 143 ENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 143 ~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
+-... ++.+.++.+..+++. |+.+|+=+-
T Consensus 96 DEaQ~------l~~~~ve~l~~L~~~-gi~Vil~Gl 124 (223)
T 2b8t_A 96 DEVQF------FDDRICEVANILAEN-GFVVIISGL 124 (223)
T ss_dssp CSGGG------SCTHHHHHHHHHHHT-TCEEEEECC
T ss_pred ecCcc------CcHHHHHHHHHHHhC-CCeEEEEec
Confidence 66543 445556667666664 888887653
No 344
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=31.28 E-value=32 Score=30.58 Aligned_cols=23 Identities=13% Similarity=0.258 Sum_probs=21.4
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++++++++.|+++|+.||+|-+
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V 119 (478)
T 2guy_A 97 ADDLKALSSALHERGMYLMVDVV 119 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEC
Confidence 58899999999999999999976
No 345
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=31.15 E-value=31 Score=28.44 Aligned_cols=23 Identities=22% Similarity=0.050 Sum_probs=20.1
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.+.++++++.|+++|+.+|+|-.
T Consensus 79 ~~~ld~~v~~a~~~Gi~Vild~H 101 (303)
T 7a3h_A 79 KEKVKEAVEAAIDLDIYVIIDWH 101 (303)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 36788999999999999999964
No 346
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=30.96 E-value=1.7e+02 Score=22.93 Aligned_cols=72 Identities=11% Similarity=0.187 Sum_probs=41.1
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc-CcEEEEecccccchhhhcCchhHhh-
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH-GLKLHIDGARIFNAAVALGVPVRRL- 194 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~-~~~li~D~a~~~~~~~~~~~~~~~~- 194 (359)
+.+.+++.+. ....|++.+....-+|+.+..+.++++.++.+.. +..+.+|+- .. .......
T Consensus 124 ~~e~l~~~l~---------~~D~Vl~msv~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I~VdGG----I~---~~t~~~~~ 187 (228)
T 3ovp_A 124 SVEYLAPWAN---------QIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGG----VG---PDTVHKCA 187 (228)
T ss_dssp CGGGTGGGGG---------GCSEEEEESSCTTTCSCCCCGGGHHHHHHHHHHCTTCEEEEESS----CS---TTTHHHHH
T ss_pred CHHHHHHHhc---------cCCeEEEeeecCCCCCcccCHHHHHHHHHHHHhcCCCCEEEeCC----cC---HHHHHHHH
Confidence 4555555544 2335555444322467777777788888887665 578889872 11 1222222
Q ss_pred hcCccEEEEe
Q 018243 195 VQAADSASVC 204 (359)
Q Consensus 195 ~~~~d~~~~s 204 (359)
..++|+++.+
T Consensus 188 ~aGAd~~VvG 197 (228)
T 3ovp_A 188 EAGANMIVSG 197 (228)
T ss_dssp HHTCCEEEES
T ss_pred HcCCCEEEEe
Confidence 2478876653
No 347
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=30.84 E-value=87 Score=25.47 Aligned_cols=51 Identities=8% Similarity=0.087 Sum_probs=35.7
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
..++|++.+++ .+.+.|-+ ++.. .|..+..+.++.+.++|+++|++|++-.
T Consensus 105 ~~~el~~~~~~-------~g~~gi~~-~~~~--~~~~~~~~~~~~~~~~a~~~~lpv~iH~ 155 (307)
T 2f6k_A 105 AVKTVQQALDQ-------DGALGVTV-PTNS--RGLYFGSPVLERVYQELDARQAIVALHP 155 (307)
T ss_dssp HHHHHHHHHHT-------SCCSEEEE-ESEE--TTEETTCGGGHHHHHHHHTTTCEEEEEC
T ss_pred HHHHHHHHHhc-------cCCcEEEE-eccC--CCCCCCcHhHHHHHHHHHHcCCeEEECC
Confidence 35677777753 46677755 3332 2455556789999999999999988754
No 348
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=30.72 E-value=33 Score=30.60 Aligned_cols=62 Identities=21% Similarity=0.114 Sum_probs=38.8
Q ss_pred CHHHHHHHhcCC----CCCccCCceeEEEEeccccCCC--ce-----------ecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 117 DIDLIEAAIRDP----KGEIVYPTTRLICLENTHANCG--GR-----------CLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 117 ~~~~l~~~l~~~----~~~~~~~~~~~v~i~~~~~~pt--G~-----------~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
|+..+.+.|+-. ++....-++.+|++.|....|. |. .-+.++++++++.|+++|+.||+|-+
T Consensus 25 dl~gi~~~LdyL~~~~~~~~~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 25 DLKGIIEKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp CHHHHHHTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CHHHHHHhhhhhhccccchhhhcCccEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 666665555422 0000114667888866554332 11 11357899999999999999999976
No 349
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=30.36 E-value=34 Score=30.37 Aligned_cols=58 Identities=17% Similarity=0.144 Sum_probs=36.8
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc-------------eecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG-------------RCLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG-------------~~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
|+..+.+.|+-..+ -+..+|++.|+...+.. ..-+.++++++++.|+++|+.||+|-+
T Consensus 48 ~~~gi~~~LdyL~~----LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V 118 (475)
T 2z1k_A 48 TLWGVAEKLPYLLD----LGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGV 118 (475)
T ss_dssp CHHHHHHTHHHHHH----HTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHhHHHHH----cCCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 55555555542111 25667777555432221 011358899999999999999999976
No 350
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=30.28 E-value=34 Score=30.95 Aligned_cols=23 Identities=13% Similarity=0.033 Sum_probs=21.3
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++++++++.|+++|+.||+|-+
T Consensus 92 ~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 92 DAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEe
Confidence 68899999999999999999966
No 351
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=29.93 E-value=39 Score=27.62 Aligned_cols=77 Identities=9% Similarity=0.059 Sum_probs=39.9
Q ss_pred cCCeEEecCCCcceeeccccccccCCccceee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecC
Q 018243 77 RGSEVILGDNSHIHIYENGGISTIGGVHPRTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLS 155 (359)
Q Consensus 77 ~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~ 155 (359)
++..+++..+.+.. + ++.+|++.+.+ .......++..+|.+.++...+ .++++|+.++..+ +
T Consensus 173 ~~~~~v~~H~af~Y-f-----~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~----~~v~~if~e~~~~-~------ 235 (284)
T 2prs_A 173 KGKGYFVFHDAYGY-F-----EKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLVE----QKATCVFAEPQFR-P------ 235 (284)
T ss_dssp TTCCEEEEESCCHH-H-----HHHHTCCCCEEEESSTTSCCCHHHHHHHHHHHHH----TTCCEEEECTTSC-S------
T ss_pred CCCeEEEECccHHH-H-----HHHCCCeEeEeeccCCCCCCCHHHHHHHHHHHHH----cCCCEEEEeCCCC-h------
Confidence 45567777666322 2 55567666554 2333444555555544432100 5677887754433 1
Q ss_pred hhhHHHHHHHHHHcCcEEE
Q 018243 156 VEYTDSVGEIAKKHGLKLH 174 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li 174 (359)
+-+..++++.|+.++
T Consensus 236 ----~~~~~ia~~~g~~v~ 250 (284)
T 2prs_A 236 ----AVVESVARGTSVRMG 250 (284)
T ss_dssp ----HHHHHHTTTSCCEEE
T ss_pred ----HHHHHHHHHcCCeEE
Confidence 223334666777654
No 352
>3bzs_A ESCU; auto cleavage protein, intein, T3SS, TTSS, asparagine cycliz membrane, membrane protein, protein transport; 1.48A {Escherichia coli} PDB: 3bzr_A 3bzp_A 3bzt_A 3c03_A
Probab=29.85 E-value=30 Score=24.72 Aligned_cols=20 Identities=10% Similarity=-0.024 Sum_probs=17.8
Q ss_pred HHHHHHHHHHcCcEEEEecc
Q 018243 159 TDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a 178 (359)
-.+|+++|+++|++++.|-.
T Consensus 83 A~~I~e~A~e~gVPi~e~~~ 102 (137)
T 3bzs_A 83 ALQIIKLAELYDIPVIEDIP 102 (137)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 47899999999999999963
No 353
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=29.83 E-value=35 Score=29.99 Aligned_cols=23 Identities=17% Similarity=0.261 Sum_probs=21.2
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++++++++.|+++|+.||+|-+
T Consensus 83 ~~~~~~lv~~~h~~Gi~vi~D~V 105 (449)
T 3dhu_A 83 LADFKALTDRAHELGMKVMLDIV 105 (449)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEc
Confidence 57899999999999999999976
No 354
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=29.68 E-value=86 Score=27.23 Aligned_cols=80 Identities=8% Similarity=0.040 Sum_probs=48.5
Q ss_pred CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEecc-ccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc
Q 018243 111 NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENT-HANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV 189 (359)
Q Consensus 111 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~-~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 189 (359)
+.++..++++..+.++.. ....+.+++-| .. .++++.+.++.++.+++|..||.- .. ..
T Consensus 219 DaN~~~~~~~A~~~~~~L------~~~~i~~iEqP~~~--------~~~~~~~~~l~~~~~iPIa~dE~~--~~----~~ 278 (410)
T 3dip_A 219 ELHSLWGTHAAARICNAL------ADYGVLWVEDPIAK--------MDNIPAVADLRRQTRAPICGGENL--AG----TR 278 (410)
T ss_dssp ECTTCBCHHHHHHHHHHG------GGGTCSEEECCBSC--------TTCHHHHHHHHHHHCCCEEECTTC--CS----HH
T ss_pred ECCCCCCHHHHHHHHHHH------HhcCCCEEECCCCC--------cccHHHHHHHHhhCCCCEEecCCc--CC----HH
Confidence 455666777655544432 12335577654 22 335788888888889999999962 11 11
Q ss_pred hhHhh--hcCccEEEEeccccCC
Q 018243 190 PVRRL--VQAADSASVCLSKGLG 210 (359)
Q Consensus 190 ~~~~~--~~~~d~~~~s~~K~~g 210 (359)
....+ ...+|++..-.+|+-|
T Consensus 279 ~~~~~l~~~~~d~v~~k~~~~GG 301 (410)
T 3dip_A 279 RFHEMLCADAIDFVMLDLTWCGG 301 (410)
T ss_dssp HHHHHHHTTCCSEEEECTTTSSC
T ss_pred HHHHHHHcCCCCeEeecccccCC
Confidence 22222 2368999998888644
No 355
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=29.56 E-value=35 Score=28.17 Aligned_cols=22 Identities=14% Similarity=-0.067 Sum_probs=19.0
Q ss_pred hhHHHHHHHHHHcCcEEEEecc
Q 018243 157 EYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~a 178 (359)
+.++++.++|+++|+++|+|-.
T Consensus 90 ~~~d~~~~~a~~~Gi~vil~~~ 111 (351)
T 3vup_A 90 DDMKDLLDTAKKYNILVFPCLW 111 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEec
Confidence 4578999999999999998853
No 356
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=29.52 E-value=55 Score=28.23 Aligned_cols=81 Identities=9% Similarity=0.066 Sum_probs=46.5
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcC
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALG 188 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~ 188 (359)
..+.++..+.++. +.++.. .+..+.+++-|.. .++++.+.+++++.+++|..||.- + ..
T Consensus 206 ~vDaN~~~~~~~a-~~~~~l------~~~~i~~iEqP~~--------~~d~~~~~~l~~~~~ipIa~dE~~-~-~~---- 264 (393)
T 1wuf_A 206 MADANSAYNREDF-LLLKEL------DQYDLEMIEQPFG--------TKDFVDHAWLQKQLKTRICLDENI-R-SV---- 264 (393)
T ss_dssp EEECTTCCCGGGH-HHHHTT------GGGTCSEEECCSC--------SSCSHHHHHHHTTCSSEEEECTTC-C-SH----
T ss_pred EEECCCCCCHHHH-HHHHHH------HhCCCeEEECCCC--------CcCHHHHHHHHHhCCCCEEECCCc-C-CH----
Confidence 3344555566655 555532 2234557765432 345778888888888999999852 1 11
Q ss_pred chhHhhh--cCccEEEEeccccCC
Q 018243 189 VPVRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 189 ~~~~~~~--~~~d~~~~s~~K~~g 210 (359)
.....+. ..+|++..-..|+-|
T Consensus 265 ~~~~~~i~~~a~d~v~ik~~~~GG 288 (393)
T 1wuf_A 265 KDVEQAHSIGSCRAINLKLARVGG 288 (393)
T ss_dssp HHHHHHHHHTCCSEEEECTGGGTS
T ss_pred HHHHHHHHhCCCCEEEeChhhhCC
Confidence 1122221 357888888888533
No 357
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=29.46 E-value=51 Score=28.12 Aligned_cols=80 Identities=14% Similarity=0.089 Sum_probs=46.4
Q ss_pred CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch
Q 018243 111 NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP 190 (359)
Q Consensus 111 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~ 190 (359)
+.++.+++++..+.++.. ....+.+++-|.. .++++.+.++.++.+++|..||.- ... ..
T Consensus 191 Dan~~~~~~~a~~~~~~l------~~~~i~~iEqP~~--------~~d~~~~~~l~~~~~iPIa~dE~~--~~~----~~ 250 (367)
T 3dg3_A 191 DGNRGWSAAESLRAMREM------ADLDLLFAEELCP--------ADDVLSRRRLVGQLDMPFIADESV--PTP----AD 250 (367)
T ss_dssp ECTTCSCHHHHHHHHHHT------TTSCCSCEESCSC--------TTSHHHHHHHHHHCSSCEEECTTC--SSH----HH
T ss_pred ECCCCCCHHHHHHHHHHH------HHhCCCEEECCCC--------cccHHHHHHHHHhCCCCEEecCCc--CCH----HH
Confidence 345556666654444432 1223446664332 245778888888889999999862 111 11
Q ss_pred hHhh--hcCccEEEEeccccCCC
Q 018243 191 VRRL--VQAADSASVCLSKGLGA 211 (359)
Q Consensus 191 ~~~~--~~~~d~~~~s~~K~~g~ 211 (359)
...+ ...+|++..-.+|+ |.
T Consensus 251 ~~~~i~~~~~d~v~~k~~~~-Gi 272 (367)
T 3dg3_A 251 VTREVLGGSATAISIKTART-GF 272 (367)
T ss_dssp HHHHHHHTSCSEEEECHHHH-TT
T ss_pred HHHHHHcCCCCEEEeehhhh-hH
Confidence 2222 13688998888887 64
No 358
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=29.42 E-value=34 Score=27.96 Aligned_cols=23 Identities=13% Similarity=0.195 Sum_probs=20.5
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.+.++++++.|+++|+.+|+|-.
T Consensus 63 ~~~ld~~v~~a~~~Gi~Vild~H 85 (294)
T 2whl_A 63 IDTIREVIELAEQNKMVAVVEVH 85 (294)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 56789999999999999999964
No 359
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=29.41 E-value=35 Score=30.84 Aligned_cols=44 Identities=20% Similarity=0.110 Sum_probs=31.7
Q ss_pred ceeEEEEeccccCCCc---e-----------ecChhhHHHHHHHHHHcCcEEEEeccc
Q 018243 136 TTRLICLENTHANCGG---R-----------CLSVEYTDSVGEIAKKHGLKLHIDGAR 179 (359)
Q Consensus 136 ~~~~v~i~~~~~~ptG---~-----------~~~~~~l~~i~~~~~~~~~~li~D~a~ 179 (359)
++.+|++.|...+|.. . .-+.++++++++.|+++|+.||.|-+.
T Consensus 45 Gvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 45 GIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp TCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 5667777666554431 1 113578999999999999999999763
No 360
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=29.34 E-value=30 Score=28.48 Aligned_cols=61 Identities=8% Similarity=0.099 Sum_probs=41.3
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEEe
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHID 176 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~D 176 (359)
|.+++ .+|.+.+++.++...+ .++..+++..+.. -+..++.++..++.+.+.+. .+++|+=
T Consensus 14 Pf~~d-~iD~~~l~~lv~~li~----~Gv~gl~v~GttG--E~~~Lt~~Er~~v~~~~~~~~~grvpviaG 77 (292)
T 3daq_A 14 PFTNN-KVNLEALKAHVNFLLE----NNAQAIIVNGTTA--ESPTLTTDEKELILKTVIDLVDKRVPVIAG 77 (292)
T ss_dssp CEETT-EECHHHHHHHHHHHHH----TTCCEEEESSGGG--TGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CcCCC-CcCHHHHHHHHHHHHH----cCCCEEEECcccc--ccccCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 55567 8999988887764322 4566777633332 35677889999999988765 4677763
No 361
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=29.34 E-value=1e+02 Score=21.85 Aligned_cols=45 Identities=7% Similarity=0.044 Sum_probs=29.7
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEE
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 175 (359)
-.++..+.+++ .+.++|++.+-.. | .+-+..+..+|++++++++.
T Consensus 45 G~~~v~kal~~-------gkaklViiA~D~~-~------~~~~~~l~~lc~~~~IP~~~ 89 (135)
T 2aif_A 45 GANEATKALNR-------GIAEIVLLAADAE-P------LEILLHLPLVCEDKNTPYVF 89 (135)
T ss_dssp SHHHHHHHHHT-------TCEEEEEEETTCS-C------HHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHc-------CCCeEEEEecCCC-h------HHHHhHHHHHHHhcCCcEEE
Confidence 34566777775 5777888733222 2 12248899999999988764
No 362
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=29.28 E-value=69 Score=25.53 Aligned_cols=33 Identities=21% Similarity=0.248 Sum_probs=23.2
Q ss_pred CeEEcCCchHHHHHHHHHhhhhcCCeEEecCCC
Q 018243 55 AGLFVPSGTMGNLISVLVHCETRGSEVILGDNS 87 (359)
Q Consensus 55 ~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~ 87 (359)
..+++|+|+..+=.++...+.+.|-+|++..-.
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 356778888777777776666788888765543
No 363
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=29.24 E-value=21 Score=29.56 Aligned_cols=61 Identities=10% Similarity=0.033 Sum_probs=40.7
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEEe
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHID 176 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~D 176 (359)
|. +++.+|.+.+++.++...+ .++..+++..+.. -+..++.++..++.+.+.+. .+++|+=
T Consensus 12 Pf-~dg~iD~~~l~~lv~~li~----~Gv~gi~v~GttG--E~~~Ls~~Er~~v~~~~~~~~~grvpviaG 75 (297)
T 2rfg_A 12 PF-INGQVDEKALAGLVDWQIK----HGAHGLVPVGTTG--ESPTLTEEEHKRVVALVAEQAQGRVPVIAG 75 (297)
T ss_dssp CE-ETTEECHHHHHHHHHHHHH----TTCSEEECSSGGG--TGGGSCHHHHHHHHHHHHHHHTTSSCBEEE
T ss_pred Cc-CCCCcCHHHHHHHHHHHHH----cCCCEEEECcccc--chhhCCHHHHHHHHHHHHHHhCCCCeEEEc
Confidence 55 6788999988887764322 3566676633332 35678889999999887764 3566644
No 364
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=29.10 E-value=60 Score=22.57 Aligned_cols=32 Identities=22% Similarity=0.422 Sum_probs=22.4
Q ss_pred CceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 135 PTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 135 ~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.+++.||+ ++ |.. =+++.++|+++|+.++- .+
T Consensus 81 ~g~k~v~~-~~-----G~~-----~~e~~~~a~~~Girvv~-nC 112 (122)
T 3ff4_A 81 LKPKRVIF-NP-----GTE-----NEELEEILSENGIEPVI-GC 112 (122)
T ss_dssp HCCSEEEE-CT-----TCC-----CHHHHHHHHHTTCEEEE-SC
T ss_pred cCCCEEEE-CC-----CCC-----hHHHHHHHHHcCCeEEC-Cc
Confidence 46667777 32 331 27899999999999884 54
No 365
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=29.10 E-value=37 Score=27.74 Aligned_cols=22 Identities=23% Similarity=0.107 Sum_probs=19.6
Q ss_pred hhHHHHHHHHHHcCcEEEEecc
Q 018243 157 EYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~a 178 (359)
+.++++++.|.++|+.+|+|-.
T Consensus 79 ~~ld~~v~~a~~~Gi~vild~h 100 (293)
T 1tvn_A 79 SRLDTVVNAAIAEDMYVIIDFH 100 (293)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEcC
Confidence 5688899999999999999964
No 366
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=28.98 E-value=81 Score=25.58 Aligned_cols=54 Identities=11% Similarity=0.040 Sum_probs=33.8
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceec----------ChhhHHHHHHHHHHcCcEEEEe
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCL----------SVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~----------~~~~l~~i~~~~~~~~~~li~D 176 (359)
+++.+.+.+++..+ .+..+|++ |-.. .+|... +.+.++.+.++|+++++.|++=
T Consensus 38 Nl~~~~~~i~~A~~----~gadlvvf-PE~~-l~gy~~~~~~~~a~~~~~~~~~~l~~la~~~~i~iv~G 101 (281)
T 3p8k_A 38 NETQITQWFEKNMN----AEVDVVVL-PEMW-NNGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVAG 101 (281)
T ss_dssp HHHHHHHHHHHHCC----TTCCEEEC-CSST-TTTTCGGGHHHHSEETTHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHh----CCCcEEEc-CCCc-cCCCChhHHHHhhhccCcHHHHHHHHHHhhCCeEEEEe
Confidence 34555555553211 46778877 5444 345433 2356788999999999988764
No 367
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=28.95 E-value=34 Score=28.98 Aligned_cols=23 Identities=13% Similarity=0.203 Sum_probs=20.6
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.+.+++++++|+++|+++|+|-.
T Consensus 86 l~~ld~~v~~a~~~GiyVIlDlH 108 (345)
T 3jug_A 86 IDTVREVIELAEQNKMVAVVEVH 108 (345)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 57789999999999999999965
No 368
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=28.82 E-value=35 Score=30.95 Aligned_cols=27 Identities=7% Similarity=0.089 Sum_probs=24.0
Q ss_pred CceecChhhHHHHHHHHHHcCcEEEEe
Q 018243 150 GGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 150 tG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
.|-.|+.+++++|.+.|+++||-||--
T Consensus 217 ~~g~YT~~di~eIv~YA~~rgI~VIPE 243 (543)
T 3rcn_A 217 HGGFYTQDDLREIVAFAADRHITVIPE 243 (543)
T ss_dssp EECCBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCcCHHHHHHHHHHHHHcCCEEeee
Confidence 366899999999999999999998865
No 369
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=28.60 E-value=39 Score=29.54 Aligned_cols=24 Identities=29% Similarity=0.263 Sum_probs=21.7
Q ss_pred hhhHHHHHHHHHHcCcEEEEeccc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGAR 179 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a~ 179 (359)
.++++++++.|+++|+.||.|-+.
T Consensus 81 ~~d~~~lv~~ah~~Gi~vilD~V~ 104 (424)
T 2dh2_A 81 KEDFDSLLQSAKKKSIRVILDLTP 104 (424)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEECC
Confidence 588999999999999999999763
No 370
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=28.54 E-value=73 Score=27.16 Aligned_cols=58 Identities=16% Similarity=0.153 Sum_probs=36.7
Q ss_pred EEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh--cCccEEEEeccccCC
Q 018243 139 LICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 139 ~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d~~~~s~~K~~g 210 (359)
+.+++-|.. .++++.+.++.++.+++|..||.- + .. .....+. ..+|++..-.+|+.|
T Consensus 216 i~~iEqP~~--------~~~~~~~~~l~~~~~iPia~dE~~-~-~~----~~~~~~~~~~~~d~v~~k~~~~GG 275 (370)
T 1chr_A 216 VELIEQPVG--------RENTQALRRLSDNNRVAIMADESL-S-TL----ASAFDLARDRSVDVFSLKLCNMGG 275 (370)
T ss_dssp EEEEECCSC--------TTCHHHHHHHHHHSCSEEEESSSC-C-SH----HHHHHHHTTTSCSEEEECTTTSCS
T ss_pred CCEEECCCC--------cccHHHHHHHHhhCCCCEEeCCCc-C-CH----HHHHHHHHcCCCCEEEECccccCC
Confidence 567765432 345778888888889999999862 1 11 1122222 358899888888544
No 371
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=28.24 E-value=73 Score=25.96 Aligned_cols=51 Identities=10% Similarity=0.096 Sum_probs=31.9
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
.++|++ +.+ .+.+.|-+ ++...+.+...+.+.+..+.++|.++|+.|++-.
T Consensus 108 ~~eL~~-~~~-------~g~~Gi~~-~~~~~~~~~~~~d~~~~~~~~~a~e~glpv~iH~ 158 (291)
T 3irs_A 108 MAQMQE-ILD-------LGIRIVNL-EPGVWATPMHVDDRRLYPLYAFCEDNGIPVIMMT 158 (291)
T ss_dssp HHHHHH-HHH-------TTCCCEEE-CGGGSSSCCCTTCGGGHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHH-HHh-------CCCeEEEE-eCCCCCCCCCCCCHHHHHHHHHHHHcCCeEEEeC
Confidence 456666 443 45666666 3222122444556778888899999988877764
No 372
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=28.21 E-value=39 Score=27.75 Aligned_cols=24 Identities=13% Similarity=0.063 Sum_probs=20.9
Q ss_pred ChhhHHHHHHHHHHcCcEEEEecc
Q 018243 155 SVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 155 ~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
+.+.++++++.|+++|+.+|+|-.
T Consensus 63 ~~~~ld~~v~~a~~~Gi~Vild~h 86 (302)
T 1bqc_A 63 GPSDVANVISLCKQNRLICMLEVH 86 (302)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEG
T ss_pred CHHHHHHHHHHHHHCCCEEEEEec
Confidence 356799999999999999999953
No 373
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=28.20 E-value=35 Score=30.42 Aligned_cols=23 Identities=17% Similarity=0.307 Sum_probs=21.4
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++++++++.|+++|+.||+|-+
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V 119 (484)
T 2aaa_A 97 ADNLKSLSDALHARGMYLMVDVV 119 (484)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEC
Confidence 58899999999999999999976
No 374
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=28.08 E-value=31 Score=30.08 Aligned_cols=23 Identities=17% Similarity=0.257 Sum_probs=21.4
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++++++++.|+++|+.||+|-+
T Consensus 74 ~~d~~~lv~~~h~~Gi~VilD~V 96 (422)
T 1ua7_A 74 EQEFKEMCAAAEEYGIKVIVDAV 96 (422)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 68899999999999999999976
No 375
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=27.99 E-value=2.1e+02 Score=23.61 Aligned_cols=23 Identities=17% Similarity=0.177 Sum_probs=19.3
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.+.+.++.+.++++|+.+++|-.
T Consensus 166 ~~~~~~~~~~a~~~g~~v~~Dp~ 188 (331)
T 2fv7_A 166 PATSLEALTMARRSGVKTLFNPA 188 (331)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCC
T ss_pred HHHHHHHHHHHHHcCCEEEEeCC
Confidence 35678888999999999999975
No 376
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=27.88 E-value=1.1e+02 Score=25.30 Aligned_cols=50 Identities=16% Similarity=0.040 Sum_probs=36.6
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
.++|++.+++ .+.+.|-+ ++. ..|..++.+.+..+.+.|.++|+.|.+--
T Consensus 113 ~~el~r~~~~-------~G~~Gv~l-~~~--~~~~~l~d~~~~p~~~~~~e~g~pv~iH~ 162 (312)
T 3ij6_A 113 CKVISSIKDD-------ENLVGAQI-FTR--HLGKSIADKEFRPVLAQAAKLHVPLWMHP 162 (312)
T ss_dssp HHHHHHHHHC-------TTEEEEEE-ESE--ETTEETTSTTTHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHh-------CCCceEec-cCC--CCCCCCCCccHHHHHHHHHHcCCeEEEcC
Confidence 4577777653 56777777 333 23666777889999999999999887764
No 377
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=27.82 E-value=34 Score=24.69 Aligned_cols=20 Identities=20% Similarity=0.293 Sum_probs=17.8
Q ss_pred HHHHHHHHHHcCcEEEEecc
Q 018243 159 TDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a 178 (359)
-.+|+++|+++|++|+.|-.
T Consensus 82 A~~I~e~A~e~gVPi~e~~~ 101 (144)
T 2jlj_A 82 VQTVRKIAEEEGVPILQRIP 101 (144)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 48899999999999999963
No 378
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=27.57 E-value=80 Score=28.65 Aligned_cols=49 Identities=18% Similarity=0.256 Sum_probs=33.6
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
.+.+++.++ ....+|.+--... +.... .+..+++.++|++||+.+|+++
T Consensus 28 ~~~ve~al~--------~Gv~~vQlR~K~~-~~~~~--~~~a~~l~~l~~~~~v~liIND 76 (540)
T 3nl6_A 28 YGQVEAGLQ--------NGVTLVQIREKDA-DTKFF--IEEALQIKELCHAHNVPLIIND 76 (540)
T ss_dssp HHHHHHHHH--------TTCSEEEECCSSS-CTTHH--HHHHHHHHHHHHHTTCCEEECS
T ss_pred HHHHHHHHH--------CCCCEEEEecCCC-CHHHH--HHHHHHHHHHHHhcCCEEEEeC
Confidence 477888888 6788888833222 22222 2456788889999999999964
No 379
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=27.54 E-value=1.1e+02 Score=25.65 Aligned_cols=47 Identities=19% Similarity=0.203 Sum_probs=24.4
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEE
Q 018243 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLH 174 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li 174 (359)
++.+.++..++ ...+.|+++.... |... .+.++.|.++..+.|++||
T Consensus 227 ~~~~~l~~~~~--------~g~~GiVle~~G~---Gn~p-~~~~~~l~~a~~~~gi~VV 273 (331)
T 1agx_A 227 MMPDAYQAFAK--------AGVKAIIHAGTGN---GSMA-NYLVPEVRKLHDEQGLQIV 273 (331)
T ss_dssp CCTHHHHHHHT--------TTCSEEEEEEBTT---TBCC-TTHHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHh--------CCCCEEEEeeECC---CCCC-HHHHHHHHHHHHcCCCEEE
Confidence 34555666655 4566777755544 4443 2344444444425565543
No 380
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=27.44 E-value=78 Score=24.66 Aligned_cols=53 Identities=13% Similarity=0.153 Sum_probs=28.6
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCC--Ccee--cChhhHHHHHHHHHHcCcEEEEec
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANC--GGRC--LSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p--tG~~--~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
+++.+.+.+++ ..++.|++.+++.+. .|.. ...+.-+.+.++|+++|+. ++|-
T Consensus 113 ~l~~~i~~~~~-------~g~~vil~tp~p~~~~~~~~~~~~~~~y~~~~~~vA~~~~v~-~iD~ 169 (233)
T 1k7c_A 113 YLENAAKLFTA-------KGAKVILSSQTPNNPWETGTFVNSPTRFVEYAELAAEVAGVE-YVDH 169 (233)
T ss_dssp HHHHHHHHHHH-------TTCEEEEECCCCCCTTTTSSCCCCCCHHHHHHHHHHHHHTCE-EECH
T ss_pred HHHHHHHHHHH-------CCCEEEEECCCCccccCCCccccchHHHHHHHHHHHHHhCCe-EEec
Confidence 34555555542 345677775544321 1321 1123457788999999864 4564
No 381
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=27.42 E-value=97 Score=24.68 Aligned_cols=40 Identities=18% Similarity=0.181 Sum_probs=27.4
Q ss_pred CceeEEEEeccccCCCceecC--------------hhhHHHHHHHHHHcCcEEEEe
Q 018243 135 PTTRLICLENTHANCGGRCLS--------------VEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 135 ~~~~~v~i~~~~~~ptG~~~~--------------~~~l~~i~~~~~~~~~~li~D 176 (359)
.++.+|++ |-.. -+|.... .+.++.+.++++++++.|++=
T Consensus 33 ~gadlvvf-PE~~-~~gy~~~~~~~~~~~a~~~~~~~~~~~l~~~a~~~~~~iv~G 86 (262)
T 3ivz_A 33 QGAQLVVL-PELF-DTGYNFETREEVFEIAQKIPEGETTTFLMDVARDTGVYIVAG 86 (262)
T ss_dssp TTCSEEEC-CTTT-TTCSCCSCHHHHHHHCBCTTTSHHHHHHHHHHHHHCCEEEEE
T ss_pred CCCCEEEe-CCCc-ccCCCCCCHHHHHHhcCccCCCHHHHHHHHHHHHcCcEEEEe
Confidence 45678777 5444 3455432 246788999999999988864
No 382
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=27.27 E-value=51 Score=27.13 Aligned_cols=75 Identities=15% Similarity=0.184 Sum_probs=42.8
Q ss_pred CeEEecCCCcceeeccccccccCCccceee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChh
Q 018243 79 SEVILGDNSHIHIYENGGISTIGGVHPRTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVE 157 (359)
Q Consensus 79 ~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~ 157 (359)
..+++..+.|.. + ++.+|++...+ .......++..+|.+.++...+ .++++|+.++..+ +
T Consensus 184 ~~~v~~H~af~Y-f-----~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~----~~v~~if~e~~~~-~-------- 244 (294)
T 3hh8_A 184 KLIVTSEGCFKY-F-----SKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKV----IKPSALFVESSVD-R-------- 244 (294)
T ss_dssp CCEEEEESCCHH-H-----HHHHTCCEEEEESSCCSCCCCHHHHHHHHHHHHH----SCCSCEEEETTSC-S--------
T ss_pred cEEEEECChHHH-H-----HHHcCCceeeccccCCCCCCCHHHHHHHHHHHHH----cCCCEEEEeCCCC-c--------
Confidence 456666665322 1 56677776665 2334444565555554432110 5788888866443 1
Q ss_pred hHHHHHHHHHHcCcEEE
Q 018243 158 YTDSVGEIAKKHGLKLH 174 (359)
Q Consensus 158 ~l~~i~~~~~~~~~~li 174 (359)
+.+..++++.|+.++
T Consensus 245 --~~~~~ia~~~g~~v~ 259 (294)
T 3hh8_A 245 --RPMETVSKDSGIPIY 259 (294)
T ss_dssp --HHHHHHHHHHCCCEE
T ss_pred --HHHHHHHHHhCCcEE
Confidence 334566888888876
No 383
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=27.07 E-value=60 Score=27.70 Aligned_cols=48 Identities=25% Similarity=0.319 Sum_probs=29.4
Q ss_pred hhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh--cCccEEEEeccccCC
Q 018243 157 EYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d~~~~s~~K~~g 210 (359)
++++.+.++.++.+++|..||.- + . ......+. ..+|++..-.+|+-|
T Consensus 222 ~~~~~~~~l~~~~~iPIa~dE~~-~-~----~~~~~~~~~~~~~d~v~~k~~~~GG 271 (368)
T 3q45_A 222 NLYTALPKIRQACRIPIMADESC-C-N----SFDAERLIQIQACDSFNLKLSKSAG 271 (368)
T ss_dssp GGGGGHHHHHHTCSSCEEESTTC-C-S----HHHHHHHHHTTCCSEEEECTTTTTS
T ss_pred hHHHHHHHHHhhCCCCEEEcCCc-C-C----HHHHHHHHHcCCCCeEEechhhcCC
Confidence 45667777777778888888852 1 1 11122222 367888888888544
No 384
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=27.03 E-value=42 Score=27.32 Aligned_cols=23 Identities=13% Similarity=-0.019 Sum_probs=19.7
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.+.++++++.|+++|+.+|+|-.
T Consensus 76 ~~~ld~~v~~a~~~Gi~vild~h 98 (291)
T 1egz_A 76 KAKVERVVDAAIANDMYAIIGWH 98 (291)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEcC
Confidence 35678899999999999999863
No 385
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=26.85 E-value=42 Score=28.57 Aligned_cols=23 Identities=17% Similarity=0.095 Sum_probs=20.3
Q ss_pred hhHHHHHHHHHHcCcEEEEeccc
Q 018243 157 EYTDSVGEIAKKHGLKLHIDGAR 179 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~a~ 179 (359)
+.++++++.|+++|+.+|+|-.+
T Consensus 90 ~~ld~~v~~a~~~Gi~VIld~H~ 112 (364)
T 1g01_A 90 DLVYEGIELAFEHDMYVIVDWHV 112 (364)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEecc
Confidence 56889999999999999999764
No 386
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=26.84 E-value=94 Score=21.57 Aligned_cols=45 Identities=4% Similarity=0.012 Sum_probs=29.2
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEe
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
.++..+.+++ .+.++|++.+-.+ |-+ -...+..+|++++++++.-
T Consensus 33 ~~~v~kal~~-------gka~lViiA~D~~-~~~------~~~~l~~lc~~~~Vp~~~v 77 (124)
T 2fc3_A 33 TNETTKAVER-------GLAKLVVIAEDVD-PPE------IVMHLPLLCDEKKIPYVYV 77 (124)
T ss_dssp HHHHHHHHHT-------TCCSEEEEETTCS-SGG------GTTTHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHc-------CCceEEEEcCCCC-hHH------HHHHHHHHHHHcCCCEEEE
Confidence 4566777775 5677888844333 322 2577888999999886543
No 387
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=26.83 E-value=42 Score=28.50 Aligned_cols=23 Identities=22% Similarity=0.199 Sum_probs=19.9
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.+.+++++++|+++|+.+|+|-.
T Consensus 120 l~~ld~~v~~a~~~Gi~Vild~H 142 (359)
T 4hty_A 120 LELLDQVVAWNNELGIYTILDWH 142 (359)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcC
Confidence 35679999999999999999954
No 388
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=26.82 E-value=39 Score=27.64 Aligned_cols=74 Identities=8% Similarity=0.107 Sum_probs=40.7
Q ss_pred cCCeEEecCCCcceeeccccccccCCccceeee-cCCCCCCCHHHH---HHHhcCCCCCccCCceeEEEEeccccCCCce
Q 018243 77 RGSEVILGDNSHIHIYENGGISTIGGVHPRTVK-NNQDGTMDIDLI---EAAIRDPKGEIVYPTTRLICLENTHANCGGR 152 (359)
Q Consensus 77 ~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~-~~~~~~~~~~~l---~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~ 152 (359)
++..+++..+.+.. + ++.+|++.+.+. ......++..+| .+.+++ .++++|+.++..+ +
T Consensus 176 ~~~~~v~~H~af~Y-f-----~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~-------~~v~~if~e~~~~-~--- 238 (284)
T 3cx3_A 176 TQKTFVTQHTAFSY-L-----AKRFGLNQLGIAGISPEQEPSPRQLTEIQEFVKT-------YKVKTIFTESNAS-S--- 238 (284)
T ss_dssp SCCCEEEEESCCHH-H-----HHHTTCCEEEEECSSTTCCCCSHHHHHHHHHHHH-------TTCCCEEECSSSC-C---
T ss_pred CCCEEEEECCchHH-H-----HHHcCCEEeeccCCCCCCCCCHHHHHHHHHHHHH-------cCCCEEEEeCCCC-c---
Confidence 45567777766322 2 566777766652 333334454444 444443 5778888855443 1
Q ss_pred ecChhhHHHHHHHHHHcCcEEE
Q 018243 153 CLSVEYTDSVGEIAKKHGLKLH 174 (359)
Q Consensus 153 ~~~~~~l~~i~~~~~~~~~~li 174 (359)
+-+..++++.|+.++
T Consensus 239 -------~~~~~ia~~~g~~v~ 253 (284)
T 3cx3_A 239 -------KVAETLVKSTGVGLK 253 (284)
T ss_dssp -------HHHHHHHSSSSCCEE
T ss_pred -------HHHHHHHHHcCCeEE
Confidence 223345667776654
No 389
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=26.79 E-value=51 Score=28.33 Aligned_cols=80 Identities=13% Similarity=0.077 Sum_probs=43.4
Q ss_pred CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch
Q 018243 111 NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP 190 (359)
Q Consensus 111 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~ 190 (359)
+.|+.+++++..+.++.. ....+.+++-|. +.++++.+.++.++.+++|..||.- + .. ..
T Consensus 219 DaN~~~~~~~A~~~~~~l------~~~~i~~iEeP~--------~~~d~~~~~~l~~~~~iPIa~dE~~-~-~~----~~ 278 (383)
T 3toy_A 219 DFNQSLDPAEATRRIARL------ADYDLTWIEEPV--------PQENLSGHAAVRERSEIPIQAGENW-W-FP----RG 278 (383)
T ss_dssp ECTTCSCHHHHHHHHHHH------GGGCCSEEECCS--------CTTCHHHHHHHHHHCSSCEEECTTC-C-HH----HH
T ss_pred eCCCCCCHHHHHHHHHHH------HhhCCCEEECCC--------CcchHHHHHHHHhhcCCCEEeCCCc-C-CH----HH
Confidence 344555666544333321 122345666533 2345777888888888889999861 1 11 11
Q ss_pred hHhhh--cCccEEEEeccccCC
Q 018243 191 VRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 191 ~~~~~--~~~d~~~~s~~K~~g 210 (359)
...+. ..+|++..-.+|+.|
T Consensus 279 ~~~~i~~~a~d~v~ik~~~~GG 300 (383)
T 3toy_A 279 FAEAIAAGASDFIMPDLMKVGG 300 (383)
T ss_dssp HHHHHHHTCCSEECCCTTTTTH
T ss_pred HHHHHHcCCCCEEEeCccccCC
Confidence 22221 357888777777533
No 390
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=26.71 E-value=68 Score=26.13 Aligned_cols=90 Identities=13% Similarity=0.038 Sum_probs=46.9
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEe-ccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc-CchhHhh
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLE-NTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL-GVPVRRL 194 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~-~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~ 194 (359)
++++++.+++..... .+..+++++ ...+.|+ .....-++..+..+.+.++++|++|..|+.|..... .......
T Consensus 157 t~~ei~~Ave~i~~~---Gn~~i~L~~Rg~~~yp~-y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g~~~~~~~~~~aAv 232 (276)
T 1vs1_A 157 TVEELLAAAEYILLE---GNWQVVLVERGIRTFEP-STRFTLDVAAVAVLKEATHLPVIVDPSHPAGRRSLVPALAKAGL 232 (276)
T ss_dssp CHHHHHHHHHHHHHT---TCCCEEEEECCBCCSCC-SSSSBCBHHHHHHHHHHBSSCEEECCHHHHCSGGGHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc---CCCeEEEEeCCcCCCCC-cCcchhCHHHHHHHHHHhCCCEEEeCCCCCCccchHHHHHHHHH
Confidence 667766665532111 234566664 3323232 222233577777777777999999999875532111 1123333
Q ss_pred hcCccEEEE----eccccCC
Q 018243 195 VQAADSASV----CLSKGLG 210 (359)
Q Consensus 195 ~~~~d~~~~----s~~K~~g 210 (359)
..++|-+.+ .+.|.++
T Consensus 233 a~Ga~Gl~IE~H~~~d~a~~ 252 (276)
T 1vs1_A 233 AAGADGLIVEVHPNPEEALS 252 (276)
T ss_dssp HTTCSEEEEEBCSSGGGCSS
T ss_pred HcCCCEEEEEecCCcccCCC
Confidence 457773333 4455443
No 391
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=26.69 E-value=1e+02 Score=24.62 Aligned_cols=69 Identities=23% Similarity=0.149 Sum_probs=37.4
Q ss_pred eEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcC
Q 018243 56 GLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRD 127 (359)
Q Consensus 56 ~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~ 127 (359)
.+++|+|+..+=.++...+.+.|-+|++..-.-...-+...-....|.+...+..+-. |.+++++.+++
T Consensus 11 valVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~---~~~~v~~~~~~ 79 (255)
T 4g81_D 11 TALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVT---DELAIEAAFSK 79 (255)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT---CHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC---CHHHHHHHHHH
Confidence 5778888877777777666678888887654322111100011223445555533311 66666665554
No 392
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=26.59 E-value=1e+02 Score=26.14 Aligned_cols=51 Identities=12% Similarity=0.052 Sum_probs=36.5
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
..++|++.+++ .+.+.|-+.+. +.|..++.+.+..+.+.|.++|+.|.+=-
T Consensus 143 a~~El~r~~~~-------~G~~Gv~l~~~---~~~~~~~d~~~~p~~~~~~e~g~pV~iH~ 193 (357)
T 3nur_A 143 AAREFERCIND-------LGFKGALIMGR---AQDGFLDQDKYDIIFKTAENLDVPIYLHP 193 (357)
T ss_dssp HHHHHHHHHHT-------TCCCCEEEESC---BTTBCTTSGGGHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHhh-------cCceEEEeCCC---CCCCCCCCccHHHHHHHHHhcCCeEEEec
Confidence 35677777754 56667777332 23555677889999999999999888764
No 393
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=26.52 E-value=1.6e+02 Score=24.32 Aligned_cols=56 Identities=11% Similarity=0.077 Sum_probs=33.2
Q ss_pred CCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcC-cEEEE
Q 018243 101 GGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHG-LKLHI 175 (359)
Q Consensus 101 ~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~-~~li~ 175 (359)
.+++++..+.. |.+.+.+.+++ .++..|+......| ...-..+.+.|++.| +..++
T Consensus 60 ~~v~~~~~Dl~-----d~~~l~~~~~~-------~~~d~Vi~~a~~~n-------~~~~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 60 KGAIIVYGLIN-----EQEAMEKILKE-------HEIDIVVSTVGGES-------ILDQIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp TTCEEEECCTT-----CHHHHHHHHHH-------TTCCEEEECCCGGG-------GGGHHHHHHHHHHHCCCSEEE
T ss_pred CCcEEEEeecC-----CHHHHHHHHhh-------CCCCEEEECCchhh-------HHHHHHHHHHHHHcCCceEEe
Confidence 45555555444 78899998883 23445544222222 223478889999988 65444
No 394
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=26.47 E-value=33 Score=28.14 Aligned_cols=54 Identities=15% Similarity=0.225 Sum_probs=37.4
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH 169 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~ 169 (359)
|.+ ++.+|.+.+++.++...+ .++..+++..+. .-+..++.++..++.+.+.+.
T Consensus 10 Pf~-dg~iD~~~l~~lv~~li~----~Gv~gl~v~Gtt--GE~~~Ls~~Er~~v~~~~~~~ 63 (286)
T 2r91_A 10 TFR-GGRLDPELFANHVKNITS----KGVDVVFVAGTT--GLGPALSLQEKMELTDAATSA 63 (286)
T ss_dssp CEE-TTEECHHHHHHHHHHHHH----TTCCEEEETSTT--TTGGGSCHHHHHHHHHHHHHH
T ss_pred CcC-CCccCHHHHHHHHHHHHH----CCCCEEEECccc--cChhhCCHHHHHHHHHHHHHH
Confidence 555 788999988887764322 356677763333 235678889999999988775
No 395
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=26.34 E-value=43 Score=29.01 Aligned_cols=23 Identities=26% Similarity=0.398 Sum_probs=21.0
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.+.++++++.|+++|+.+|+|-.
T Consensus 112 ~~~ld~vV~~a~~~Gl~VILDlH 134 (399)
T 3n9k_A 112 VQYLEKALGWARKNNIRVWIDLH 134 (399)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 57899999999999999999964
No 396
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=26.32 E-value=1.3e+02 Score=20.40 Aligned_cols=44 Identities=16% Similarity=0.144 Sum_probs=30.4
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEe
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
.++..+.+++ .+.++|++..-.. ......+..+|..++++++.-
T Consensus 31 ~~~t~kai~~-------gkakLVilA~D~~--------~~~~~~i~~~c~~~~ipv~~~ 74 (112)
T 3iz5_f 31 YKTVLKTLRS-------SLGKLIILANNCP--------PLRKSEIETYAMLAKISVHHF 74 (112)
T ss_dssp HHHHHHHHHT-------TCCSEEEECSCCC--------HHHHHHHHHHHHHTTCCEECC
T ss_pred HHHHHHHHHc-------CCceEEEEeCCCC--------HHHHHHHHHHHHHcCCcEEEe
Confidence 4566677775 6788888832221 234788889999999998853
No 397
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=26.32 E-value=41 Score=29.97 Aligned_cols=23 Identities=22% Similarity=0.328 Sum_probs=21.1
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++++++++.|+++|+.||+|-+
T Consensus 102 ~~df~~Lv~~aH~~Gi~VilD~V 124 (488)
T 2wc7_A 102 NEAFKELLDAAHQRNIKVVLDGV 124 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeC
Confidence 47899999999999999999976
No 398
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=26.32 E-value=2.4e+02 Score=22.25 Aligned_cols=104 Identities=12% Similarity=0.037 Sum_probs=53.9
Q ss_pred CeEEcCCchHHHHHHHHHhhhhcCCeEEec---CC-------Ccceeec-cccccccCCccceeeecCCCCCCCHHHHHH
Q 018243 55 AGLFVPSGTMGNLISVLVHCETRGSEVILG---DN-------SHIHIYE-NGGISTIGGVHPRTVKNNQDGTMDIDLIEA 123 (359)
Q Consensus 55 ~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~---~~-------~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~ 123 (359)
..+++++|-.+..++..+.- .|-.|+.- -+ .|....+ ....++..|+....++......-..+++.+
T Consensus 7 vvvl~SGGkDSs~al~~l~~--~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~~e~e~l~~ 84 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAIK--NRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKEKEVEDLKR 84 (237)
T ss_dssp EEEECCSSHHHHHHHHHHHH--TTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC------CHHHHHH
T ss_pred EEEEecCcHHHHHHHHHHHH--cCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCchHHHHHHHH
Confidence 34778888887777665443 45544311 11 0111111 002345567776666554322224677778
Q ss_pred HhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEE
Q 018243 124 AIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 124 ~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 175 (359)
.+++ -++..+++ |.+.+......+-+.|.+.|+..+.
T Consensus 85 ~l~~-------~~i~~vv~--------Gdi~s~yqr~r~e~vc~~~gl~~~~ 121 (237)
T 3rjz_A 85 VLSG-------LKIQGIVA--------GALASKYQRKRIEKVAKELGLEVYT 121 (237)
T ss_dssp HHTT-------SCCSEEEC--------C---CCSHHHHHHHHHHHTTCEEEC
T ss_pred HHHh-------cCCcEEEE--------CCcchHHHHHHHHHHHHHcCCEEEc
Confidence 8874 23334443 6666666677788889998877554
No 399
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=26.23 E-value=44 Score=30.58 Aligned_cols=58 Identities=24% Similarity=0.153 Sum_probs=37.6
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCC---ce-----------ecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG---GR-----------CLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt---G~-----------~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
|+..+.+.|+-..+ -++.+|++.++...|. |. .-+.++++++++.|+++|+.||+|-+
T Consensus 43 dl~gi~~~LdyL~~----LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V 114 (570)
T 1m53_A 43 DIRGIIEKLDYLKS----LGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDVV 114 (570)
T ss_dssp CHHHHHHTHHHHHH----HTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHH----cCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 66666554431110 3566777766554432 21 11357899999999999999999976
No 400
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=26.11 E-value=55 Score=28.54 Aligned_cols=81 Identities=10% Similarity=0.062 Sum_probs=47.8
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc
Q 018243 110 NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV 189 (359)
Q Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 189 (359)
.+.++..++++..+.++.. .+..+.+++-|.. .++++.+.++.++.+++|..||.. + . ..
T Consensus 226 vDan~~~~~~~A~~~~~~l------~~~~i~~iEeP~~--------~~d~~~~~~l~~~~~ipIa~dE~~-~-~----~~ 285 (421)
T 4hnl_A 226 HDVHERLHPNQAIQFAKAA------EPYQLFFLEDILP--------PDQSHWLTQLRSQSATPIATGELF-N-N----PM 285 (421)
T ss_dssp EECTTCSCHHHHHHHHHHH------GGGCCSEEECCSC--------GGGGGGHHHHHTTCCCCEEECTTC-C-S----GG
T ss_pred ccccccCCHHHHHHHHHHh------hhhhhcccccCCc--------ccchHHHHHHHhcCCCCeecCcce-e-h----hH
Confidence 3455556776655554432 2334567765442 456788888888889999999862 1 1 11
Q ss_pred hhHhhh--cCccEEEEeccccCC
Q 018243 190 PVRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 190 ~~~~~~--~~~d~~~~s~~K~~g 210 (359)
.+..+. ..+|++..-..|+-|
T Consensus 286 ~~~~~i~~~a~d~v~~d~~~~GG 308 (421)
T 4hnl_A 286 EWQELVKNRQIDFMRAHVSQIGG 308 (421)
T ss_dssp GTHHHHHTTCCSEECCCGGGGTS
T ss_pred HHHHHHhcCCceEEEeCCCCCCC
Confidence 222221 357888777777533
No 401
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=26.07 E-value=81 Score=26.31 Aligned_cols=76 Identities=12% Similarity=0.107 Sum_probs=43.0
Q ss_pred CCeEEecCCCcceeeccccccccCCccceee-ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecCh
Q 018243 78 GSEVILGDNSHIHIYENGGISTIGGVHPRTV-KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSV 156 (359)
Q Consensus 78 g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~ 156 (359)
+..+++..+.|.. + ++.+|++.+.+ .......++..+|.+.++...+ .++++|+.++..+ +
T Consensus 204 ~r~~v~~H~af~Y-f-----a~~yGL~~~~~~~~~~~~eps~~~l~~l~~~ik~----~~v~~If~e~~~~-~------- 265 (321)
T 1xvl_A 204 QRFLVSCEGAFSY-L-----ARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKT----NNVPTIFCESTVS-D------- 265 (321)
T ss_dssp GCEEEEEESTTHH-H-----HHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHT----TTCSEEEEETTSC-S-------
T ss_pred CCEEEEECchHHH-H-----HHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHH----cCCcEEEEeCCCC-h-------
Confidence 4567777666322 2 56677776665 2333445566555554432111 5788888865544 1
Q ss_pred hhHHHHHHHHHHcCcEEE
Q 018243 157 EYTDSVGEIAKKHGLKLH 174 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li 174 (359)
+-+..++++.|+.++
T Consensus 266 ---~~~~~iA~e~g~~v~ 280 (321)
T 1xvl_A 266 ---KGQKQVAQATGARFG 280 (321)
T ss_dssp ---HHHHHHHTTTCCEEE
T ss_pred ---HHHHHHHHhcCCcee
Confidence 233345778888875
No 402
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=25.98 E-value=1.1e+02 Score=23.94 Aligned_cols=42 Identities=17% Similarity=0.298 Sum_probs=21.7
Q ss_pred ceeEEEEeccccCCCceecChhhHHHHHHHHHHc-----CcEEEEec
Q 018243 136 TTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH-----GLKLHIDG 177 (359)
Q Consensus 136 ~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~-----~~~li~D~ 177 (359)
....|++.+.....+|..+...-+++|.++.+.. ++++.+|+
T Consensus 134 ~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~G 180 (230)
T 1tqj_A 134 VCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDG 180 (230)
T ss_dssp GCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEES
T ss_pred cCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEEC
Confidence 3446666455433336655544445444444333 78999997
No 403
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=25.96 E-value=79 Score=18.36 Aligned_cols=20 Identities=15% Similarity=0.179 Sum_probs=16.4
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 018243 333 QISANDVHYTLSCFQKIYAG 352 (359)
Q Consensus 333 ~~~~~~i~~~~~~l~~~~~~ 352 (359)
..++++.+.++++|++++++
T Consensus 4 ~lt~eq~~aILkaLdeaIe~ 23 (57)
T 3fxd_A 4 QLSDEQKETILKALNDAIEK 23 (57)
T ss_dssp CCCHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHc
Confidence 36788999999999988764
No 404
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=25.95 E-value=77 Score=27.68 Aligned_cols=81 Identities=9% Similarity=0.034 Sum_probs=48.6
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc
Q 018243 110 NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV 189 (359)
Q Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 189 (359)
.+.++.+++++..+.++.. ....+.+++-|. +.++++.+.++.++.+++|..||.- .. ..
T Consensus 227 vDaN~~~~~~~A~~~~~~L------e~~~i~~iEqP~--------~~~d~~~~~~l~~~~~iPIa~dE~~--~~----~~ 286 (422)
T 3tji_A 227 HDVHERLFPQQAVQLAKQL------EPFQPYFIEDIL--------PPQQSAWLEQVRQQSCVPLALGELF--NN----PA 286 (422)
T ss_dssp EECTTCSCHHHHHHHHHHH------GGGCCSEEECCS--------CGGGGGGHHHHHHHCCCCEEECTTC--CS----GG
T ss_pred EECCCCCCHHHHHHHHHHH------HhhCCCeEECCC--------ChhhHHHHHHHHhhCCCCEEEeCCc--CC----HH
Confidence 3455666777655544422 123355776543 2345778888888899999999962 11 11
Q ss_pred hhHhhh--cCccEEEEeccccCC
Q 018243 190 PVRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 190 ~~~~~~--~~~d~~~~s~~K~~g 210 (359)
....+. ..+|++..-.+|+-|
T Consensus 287 ~~~~ll~~ga~d~v~~k~~~~GG 309 (422)
T 3tji_A 287 EWHDLIVNRRIDFIRCHVSQIGG 309 (422)
T ss_dssp GTHHHHHTTCCSEECCCGGGGTS
T ss_pred HHHHHHhcCCCCEEecCccccCC
Confidence 222222 367888888888544
No 405
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=25.93 E-value=79 Score=22.34 Aligned_cols=33 Identities=21% Similarity=0.274 Sum_probs=23.2
Q ss_pred CceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 135 PTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 135 ~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
.++.+|+++. |...+ +++.++|+++|++|+.=.
T Consensus 73 ~~~~~iIlt~------g~~~~----~~i~~~A~~~~ipvl~t~ 105 (139)
T 2ioj_A 73 PNVRCLILTG------NLEPV----QLVLTKAEERGVPVILTG 105 (139)
T ss_dssp TTEEEEEEET------TCCCC----HHHHHHHHHHTCCEEECS
T ss_pred CCCcEEEEcC------CCCCC----HHHHHHHHHCCCeEEEEC
Confidence 4678888822 34444 777789999999988654
No 406
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=25.91 E-value=23 Score=29.19 Aligned_cols=61 Identities=15% Similarity=-0.001 Sum_probs=40.8
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHc---CcEEEEe
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKH---GLKLHID 176 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~---~~~li~D 176 (359)
|. +++.+|.+.+++.++...+ .++..+++..+. .-+..++.++..++.+.+.+. .+++|+=
T Consensus 12 Pf-~dg~iD~~~l~~lv~~li~----~Gv~gl~~~Gtt--GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaG 75 (292)
T 2vc6_A 12 PF-ADDRIDEVALHDLVEWQIE----EGSFGLVPCGTT--GESPTLSKSEHEQVVEITIKTANGRVPVIAG 75 (292)
T ss_dssp CE-ETTEECHHHHHHHHHHHHH----TTCSEEETTSGG--GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEE
T ss_pred Cc-CCCCcCHHHHHHHHHHHHH----cCCCEEEECccc--cChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 55 6788999988888764322 356667663333 235678889999999988764 3566544
No 407
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=25.89 E-value=1.5e+02 Score=23.63 Aligned_cols=85 Identities=8% Similarity=-0.009 Sum_probs=43.5
Q ss_pred CeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecCh-h
Q 018243 79 SEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSV-E 157 (359)
Q Consensus 79 ~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~-~ 157 (359)
+.+++++.-+-........++..|.+++.+-.+.. +.+.+++..+ .....|++.+... -||.--+. +
T Consensus 118 dG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t---~~eRi~~ia~--------~a~gFiY~Vs~~G-vTG~~~~~~~ 185 (252)
T 3tha_A 118 CALIVPELSFEESDDLIKECERYNIALITLVSVTT---PKERVKKLVK--------HAKGFIYLLASIG-ITGTKSVEEA 185 (252)
T ss_dssp EEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTS---CHHHHHHHHT--------TCCSCEEEECCSC-SSSCSHHHHH
T ss_pred CEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCC---cHHHHHHHHH--------hCCCeEEEEecCC-CCCcccCCCH
Confidence 55777776432211101235567777776522211 4566666555 3344566645333 46654222 3
Q ss_pred hHHHHHHHHHHc-CcEEEE
Q 018243 158 YTDSVGEIAKKH-GLKLHI 175 (359)
Q Consensus 158 ~l~~i~~~~~~~-~~~li~ 175 (359)
++.++.+..+++ +.++++
T Consensus 186 ~~~~~v~~vr~~~~~Pv~v 204 (252)
T 3tha_A 186 ILQDKVKEIRSFTNLPIFV 204 (252)
T ss_dssp HHHHHHHHHHTTCCSCEEE
T ss_pred HHHHHHHHHHHhcCCcEEE
Confidence 455666666655 566665
No 408
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=25.86 E-value=84 Score=23.00 Aligned_cols=63 Identities=8% Similarity=0.062 Sum_probs=39.1
Q ss_pred cccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcC---cEEE
Q 018243 98 STIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHG---LKLH 174 (359)
Q Consensus 98 ~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~---~~li 174 (359)
.+..|.+++....+ ..++++.+.+.+ .++.+|.++.... . ..+.+.++.+.+++.+ +.|+
T Consensus 42 l~~~G~eVi~lG~~----~p~e~lv~aa~~-------~~~diV~lS~~~~----~--~~~~~~~~i~~L~~~g~~~i~v~ 104 (161)
T 2yxb_A 42 LRDAGFEVVYTGLR----QTPEQVAMAAVQ-------EDVDVIGVSILNG----A--HLHLMKRLMAKLRELGADDIPVV 104 (161)
T ss_dssp HHHTTCEEECCCSB----CCHHHHHHHHHH-------TTCSEEEEEESSS----C--HHHHHHHHHHHHHHTTCTTSCEE
T ss_pred HHHCCCEEEECCCC----CCHHHHHHHHHh-------cCCCEEEEEeech----h--hHHHHHHHHHHHHhcCCCCCEEE
Confidence 44567777665332 477888877775 5777888743322 1 1345788888877764 5555
Q ss_pred Eec
Q 018243 175 IDG 177 (359)
Q Consensus 175 ~D~ 177 (359)
+=+
T Consensus 105 vGG 107 (161)
T 2yxb_A 105 LGG 107 (161)
T ss_dssp EEE
T ss_pred EeC
Confidence 544
No 409
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=25.75 E-value=2.4e+02 Score=22.11 Aligned_cols=98 Identities=15% Similarity=0.049 Sum_probs=49.1
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHH-cCcEEE--EecccccchhhhcCchhH
Q 018243 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKK-HGLKLH--IDGARIFNAAVALGVPVR 192 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~-~~~~li--~D~a~~~~~~~~~~~~~~ 192 (359)
++.++|.+.+++..+. +++++|++.. .+ |+|.+...+++....+..++ .+.++| +++....+. .
T Consensus 29 ~~~~~l~~~l~~a~~d---~~v~~ivL~~-~s-~Gg~~~~~~~i~~~l~~~~~~~~kPVia~v~g~a~~gG--------~ 95 (240)
T 3rst_A 29 YNHRTFLKNLERAKDD---KTVKGIVLKV-NS-PGGGVYESAEIHKKLEEIKKETKKPIYVSMGSMAASGG--------Y 95 (240)
T ss_dssp CCHHHHHHHHHHHHHC---TTEEEEEEEE-EE-CCBCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEETHH--------H
T ss_pred cCHHHHHHHHHHHHhC---CCcEEEEEEe-cC-CCCCHHHHHHHHHHHHHHHHhCCCeEEEEECCeehHhH--------H
Confidence 4666766666542111 6788888833 23 66665544444444444443 455554 455421111 1
Q ss_pred hhhcCccEEEEeccccCCCcee-eEEecCHHHHHH
Q 018243 193 RLVQAADSASVCLSKGLGAPVG-SVIVGSKEFIKK 226 (359)
Q Consensus 193 ~~~~~~d~~~~s~~K~~g~~~g-g~~~~~~~~~~~ 226 (359)
.+...+|.++.+.+=.+|.++- .....-+++.++
T Consensus 96 ~lA~a~D~i~a~~~a~~g~~Gv~~~~~~~~~~l~k 130 (240)
T 3rst_A 96 YISTAADKIFATPETLTGSLGVIMESVNYSKLADK 130 (240)
T ss_dssp HHHTTSSEEEECTTCEEECCCCEEEEEECHHHHHH
T ss_pred HHHHhCCeeEECCCCeEeccceeeEecCHHHHHHH
Confidence 2234688887755544554321 223334455555
No 410
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=25.64 E-value=1.2e+02 Score=20.25 Aligned_cols=43 Identities=19% Similarity=0.220 Sum_probs=29.2
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEE
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 175 (359)
.++..+.+++ .+.++|++..-.. .....++..+|++++++++.
T Consensus 27 ~~~v~kai~~-------gkaklViiA~D~~--------~~~~~~i~~~c~~~~ip~~~ 69 (104)
T 4a18_G 27 YKSTIKAIRN-------GTAKLVFISNNCP--------TVRKSEIEYYASLAQISIHH 69 (104)
T ss_dssp HHHHHHHHHH-------TCCCEEEECTTSC--------HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHc-------CCceEEEEeCCCC--------HHHHHHHHHHHHHcCCcEEE
Confidence 4566667764 5677888733221 23468888899999999883
No 411
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=25.56 E-value=46 Score=30.34 Aligned_cols=23 Identities=22% Similarity=0.185 Sum_probs=21.2
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++++++++.|+++|+.||+|-+
T Consensus 78 ~~df~~lv~~~h~~Gi~VilD~V 100 (558)
T 1uok_A 78 MEDWDELLHEMHERNMKLMMDLV 100 (558)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEe
Confidence 57899999999999999999976
No 412
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=25.51 E-value=46 Score=30.32 Aligned_cols=58 Identities=22% Similarity=0.212 Sum_probs=37.4
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCC---ce-----------ecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG---GR-----------CLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt---G~-----------~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
|+..+.+.|+-..+ -++.+|++.+....|. |. .-+.++++++++.|+++|+.||+|-+
T Consensus 30 dl~gi~~~Ldyl~~----LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V 101 (557)
T 1zja_A 30 DFKGLTEKLDYLKG----LGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDVV 101 (557)
T ss_dssp CHHHHHHTHHHHHH----HTCCEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHH----cCCCEEEECCCccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 66665554432110 2566777766554432 11 11357899999999999999999976
No 413
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=25.48 E-value=73 Score=28.00 Aligned_cols=81 Identities=11% Similarity=0.054 Sum_probs=49.7
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc
Q 018243 110 NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV 189 (359)
Q Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 189 (359)
.+.++..++++..+.++.. ....+.+++-|. +.++++.+.+++++.+++|..||.- + .. .
T Consensus 245 vDaN~~~~~~~A~~~~~~L------~~~~i~~iEeP~--------~~~d~~~~~~l~~~~~iPIa~dE~~-~-~~----~ 304 (440)
T 3t6c_A 245 HDAHERITPINAIHMAKAL------EPYQLFFLEDPV--------APENTEWLKMLRQQSSTPIAMGELF-V-NV----N 304 (440)
T ss_dssp EECTTCSCHHHHHHHHHHT------GGGCCSEEECSS--------CGGGGGGHHHHHHHCCSCEEECTTC-C-SH----H
T ss_pred EECCCCCCHHHHHHHHHHh------hhcCCCEEECCC--------ChhhHHHHHHHHhhcCCCEEeCccc-C-CH----H
Confidence 3455666877665555432 233456776543 2346788888888899999999962 1 11 1
Q ss_pred hhHhhh--cCccEEEEeccccCC
Q 018243 190 PVRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 190 ~~~~~~--~~~d~~~~s~~K~~g 210 (359)
....+. ..+|++..-.+|+-|
T Consensus 305 ~~~~~i~~~a~d~v~~k~~~~GG 327 (440)
T 3t6c_A 305 EWKPLIDNKLIDYIRCHISSIGG 327 (440)
T ss_dssp HHHHHHHTTCCSEECCCGGGGTS
T ss_pred HHHHHHHcCCccceeechhhhCC
Confidence 122222 367888888888544
No 414
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=25.47 E-value=38 Score=26.08 Aligned_cols=47 Identities=17% Similarity=0.277 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhcCceeccCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 018243 303 YAACLLKKLEEHGVLVMPESSTRVRIVVHHQISANDVHYTLSCFQKIYA 351 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~ 351 (359)
-+.++++.|.+.||-+..-...-++|++ ..++++.++++++|-+.+.
T Consensus 131 Vaak~F~aLa~~~INI~mIstSEi~IS~--vV~~~d~~~Av~aLH~~F~ 177 (200)
T 4go7_X 131 VTATFCEALAAVGVNIELISTSEIRISV--LCRDTELDKAVVALHEAFG 177 (200)
T ss_dssp HHHHHHHHHHHTTCCCCEEEECSSEEEE--EEEGGGHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHCCCCEEEEEccCCEEEE--EEeHHHHHHHHHHHHHHhC
Confidence 4568889999999877333334468887 6889999999999987764
No 415
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=25.38 E-value=46 Score=30.28 Aligned_cols=58 Identities=16% Similarity=0.101 Sum_probs=37.0
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCC---ce-----------ecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG---GR-----------CLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt---G~-----------~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
|+..+.+.|+-..+ -++.+|++.++...|. |. .-+.++++++++.|+++|+.||+|-+
T Consensus 29 d~~gi~~~ldyl~~----lGv~~i~l~Pi~~~~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 100 (555)
T 2ze0_A 29 DLRGIIEKLDYLVE----LGVDIVWICPIYRSPNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVILDLV 100 (555)
T ss_dssp CHHHHHHTHHHHHH----HTCCEEEECCCEECCCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CHHHHHHHHHHHHH----cCCCEEEeCCcccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 66655555442110 2566777755544332 11 11357899999999999999999976
No 416
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=25.35 E-value=88 Score=25.35 Aligned_cols=66 Identities=8% Similarity=0.071 Sum_probs=35.9
Q ss_pred eEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcC
Q 018243 56 GLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRD 127 (359)
Q Consensus 56 ~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~ 127 (359)
.+++|+|+..+=.++...+.+.|-.|++..-.--. .+ ...+..|.+...+..+-. |.+++++.+++
T Consensus 31 valVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~-l~--~~~~~~g~~~~~~~~Dv~---~~~~v~~~~~~ 96 (273)
T 4fgs_A 31 IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDV-LD--AAIAEIGGGAVGIQADSA---NLAELDRLYEK 96 (273)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HH--HHHHHHCTTCEEEECCTT---CHHHHHHHHHH
T ss_pred EEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHH-HH--HHHHHcCCCeEEEEecCC---CHHHHHHHHHH
Confidence 46777777766666666665688887765543111 22 112223445555543311 66666666553
No 417
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=25.30 E-value=1e+02 Score=26.37 Aligned_cols=50 Identities=24% Similarity=0.236 Sum_probs=36.6
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
.++|++.+++ .+.+.|-+ ++. ..|..++...+..+.+.|.++|+.|.+--
T Consensus 162 ~~EL~r~~~~-------~G~~Gv~l-~~~--~~g~~l~d~~~~pi~~~~~e~g~pV~iH~ 211 (373)
T 4inf_A 162 AREIHRGARE-------LGFKGIQI-NSH--TQGRYLDEEFFDPIFRALVEVDQPLYIHP 211 (373)
T ss_dssp HHHHHHHHHT-------SCCCCEEE-CSC--BTTBCTTSGGGHHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHhh-------cCceEEEE-CCC--CCCCCCCCcchHHHHHHHHHcCCeEEECC
Confidence 4577777773 36677777 333 23566677889999999999999988865
No 418
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=25.19 E-value=47 Score=30.64 Aligned_cols=58 Identities=21% Similarity=0.032 Sum_probs=40.1
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCC------ce-----------ecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG------GR-----------CLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt------G~-----------~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
|++.+.+.|+-..+ -+..+|++.++..++. |. .-+.++++++++.|+++|+.||+|-+
T Consensus 146 dl~gi~~~Ldyl~~----LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V 220 (601)
T 3edf_A 146 DIRGTIDHLDYIAG----LGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVV 220 (601)
T ss_dssp CHHHHHHTHHHHHH----TTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHH----cCCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 66666666642111 4677899977765441 11 12357899999999999999999976
No 419
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=25.10 E-value=45 Score=27.85 Aligned_cols=23 Identities=35% Similarity=0.317 Sum_probs=20.4
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.+.++++.++|+++|+.+|+|-.
T Consensus 89 ~~~ld~~i~~a~~~Gi~vild~~ 111 (344)
T 1qnr_A 89 LQTLDYVVQSAEQHNLKLIIPFV 111 (344)
T ss_dssp THHHHHHHHHHHHHTCEEEEESC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 56788999999999999999964
No 420
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=25.09 E-value=47 Score=30.61 Aligned_cols=23 Identities=9% Similarity=0.118 Sum_probs=21.1
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++++++++.|+++|+.||+|-+
T Consensus 208 ~~dfk~Lv~~aH~~GI~VilD~V 230 (599)
T 3bc9_A 208 KGELENAIDALHNNDIKVYFDAV 230 (599)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEC
Confidence 48899999999999999999966
No 421
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=25.08 E-value=2.2e+02 Score=21.45 Aligned_cols=59 Identities=12% Similarity=0.070 Sum_probs=29.0
Q ss_pred EEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCC-HHHHHHHhc
Q 018243 57 LFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMD-IDLIEAAIR 126 (359)
Q Consensus 57 ~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~~~l~~~l~ 126 (359)
+++++|+..+=..+...+.+.|-.|++..-.-.. . ....+++++..+.. | .+.+.+.++
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~-----~~~~~~~~~~~D~~-----d~~~~~~~~~~ 62 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQ-V-----PQYNNVKAVHFDVD-----WTPEEMAKQLH 62 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGG-S-----CCCTTEEEEECCTT-----SCHHHHHTTTT
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCccc-h-----hhcCCceEEEeccc-----CCHHHHHHHHc
Confidence 4566666544444444443567666644322111 1 11234344433333 6 778887776
No 422
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=25.01 E-value=47 Score=31.21 Aligned_cols=58 Identities=21% Similarity=0.130 Sum_probs=40.4
Q ss_pred CHHHHHHHhc--CCCCCccCCceeEEEEeccccCC-------------Cce-----------ecChhhHHHHHHHHHHcC
Q 018243 117 DIDLIEAAIR--DPKGEIVYPTTRLICLENTHANC-------------GGR-----------CLSVEYTDSVGEIAKKHG 170 (359)
Q Consensus 117 ~~~~l~~~l~--~~~~~~~~~~~~~v~i~~~~~~p-------------tG~-----------~~~~~~l~~i~~~~~~~~ 170 (359)
|++.+.+.|+ -..+ -++.+|++.|+..+. -|. .-+.++++++++.|+++|
T Consensus 50 dl~gi~~kLd~~yLk~----LGv~aIwL~Pi~~~~~~~~~~~~g~~~~~GY~~~Dy~~idp~~Gt~~df~~Lv~~aH~~G 125 (680)
T 1cyg_A 50 DWQGIINKINDGYLTD----MGVTAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKG 125 (680)
T ss_dssp CHHHHHHHHHTSTTTT----TTCCEEEECCCEEECCCCCSSSSCCCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTT
T ss_pred CHHHHHhhcCHHHHHh----CCCCEEEeCccccCccccccccCCCCCCCCcCchhccccCcccCCHHHHHHHHHHHHHCC
Confidence 7888888887 3222 367788886654321 111 113588999999999999
Q ss_pred cEEEEecc
Q 018243 171 LKLHIDGA 178 (359)
Q Consensus 171 ~~li~D~a 178 (359)
+.||+|-+
T Consensus 126 IkVilD~V 133 (680)
T 1cyg_A 126 IKVIIDFA 133 (680)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEeC
Confidence 99999965
No 423
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=24.93 E-value=1.1e+02 Score=26.27 Aligned_cols=80 Identities=9% Similarity=-0.032 Sum_probs=46.1
Q ss_pred CCCCCC-CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc
Q 018243 111 NQDGTM-DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV 189 (359)
Q Consensus 111 ~~~~~~-~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 189 (359)
+.++.+ ++++..+.++.. ....+.+++-|.. .++++.+.++.++.+++|+.||.- ... .
T Consensus 206 Dan~~~~~~~~A~~~~~~L------~~~~i~~iEeP~~--------~~~~~~~~~l~~~~~iPIa~dE~~--~~~----~ 265 (394)
T 3mqt_A 206 DCLYRWTDWQKARWTFRQL------EDIDLYFIEACLQ--------HDDLIGHQKLAAAINTRLCGAEMS--TTR----F 265 (394)
T ss_dssp ECTTCCSCHHHHHHHHHHT------GGGCCSEEESCSC--------TTCHHHHHHHHHHSSSEEEECTTC--CHH----H
T ss_pred ECCCCCCCHHHHHHHHHHH------hhcCCeEEECCCC--------cccHHHHHHHHhhCCCCEEeCCCc--CCH----H
Confidence 345556 666544444432 1223456665432 345788888888889999999862 111 1
Q ss_pred hhHhhh--cCccEEEEeccccCC
Q 018243 190 PVRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 190 ~~~~~~--~~~d~~~~s~~K~~g 210 (359)
....+. ..+|++..-.+|+-|
T Consensus 266 ~~~~~l~~~~~d~v~~k~~~~GG 288 (394)
T 3mqt_A 266 EAQEWLEKTGISVVQSDYNRCGG 288 (394)
T ss_dssp HHHHHHHHHCCSEECCCTTTSSC
T ss_pred HHHHHHHcCCCCeEecCccccCC
Confidence 122221 368888888888544
No 424
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=24.88 E-value=77 Score=21.90 Aligned_cols=45 Identities=7% Similarity=0.129 Sum_probs=28.5
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEe
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
.++..+.+++ .+.++|++.+-.+ |-. -...+..+|++++++++.-
T Consensus 34 ~~~v~kai~~-------gka~lViiA~D~~-p~~------~~~~l~~lc~~~~VP~~~v 78 (120)
T 1xbi_A 34 ANEVTKAVER-------GIAKLVIIAEDVK-PEE------VVAHLPYLCEEKGIPYAYV 78 (120)
T ss_dssp HHHHHHHHHH-------TCCSEEEEESCCS-SGG------GTTTHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHc-------CCceEEEEcCCCC-hHH------HHHHHHHHHHhcCCCEEEe
Confidence 4556666664 5677888744332 321 2577888999999886543
No 425
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=24.74 E-value=47 Score=31.20 Aligned_cols=58 Identities=21% Similarity=0.109 Sum_probs=40.3
Q ss_pred CHHHHHHHhc--CCCCCccCCceeEEEEeccccCCC--------------c-----------eecChhhHHHHHHHHHHc
Q 018243 117 DIDLIEAAIR--DPKGEIVYPTTRLICLENTHANCG--------------G-----------RCLSVEYTDSVGEIAKKH 169 (359)
Q Consensus 117 ~~~~l~~~l~--~~~~~~~~~~~~~v~i~~~~~~pt--------------G-----------~~~~~~~l~~i~~~~~~~ 169 (359)
|++.+.+.|+ -..+ -++.+|++.|+..++. | ..-+.++++++++.|+++
T Consensus 53 dl~gi~~kLd~~yLk~----LGvt~IwL~Pi~~~~~~~~~~~g~~~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~ 128 (686)
T 1d3c_A 53 DWQGIINKINDGYLTG----MGVTAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNPAYGTIADFQNLIAAAHAK 128 (686)
T ss_dssp CHHHHHHHHHTTTTGG----GTCCEEEECCCEEECCCCEESSSCEECCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHhcCHHHHHh----cCCCEEEeCCcccCCcccccccCccCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHC
Confidence 7888888777 3221 3567888866544211 1 011358899999999999
Q ss_pred CcEEEEecc
Q 018243 170 GLKLHIDGA 178 (359)
Q Consensus 170 ~~~li~D~a 178 (359)
|+.||+|-+
T Consensus 129 GI~VilD~V 137 (686)
T 1d3c_A 129 NIKVIIDFA 137 (686)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEeC
Confidence 999999965
No 426
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=24.72 E-value=44 Score=27.54 Aligned_cols=22 Identities=18% Similarity=0.262 Sum_probs=19.6
Q ss_pred hhHHHHHHHHHHcCcEEEEecc
Q 018243 157 EYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~a 178 (359)
+.++++++.|+++|+.+|+|-.
T Consensus 80 ~~ld~~v~~a~~~Gl~vild~h 101 (306)
T 2cks_A 80 DRMHQLIDMATARGLYVIVDWH 101 (306)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEec
Confidence 5688899999999999999964
No 427
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=24.68 E-value=48 Score=31.18 Aligned_cols=23 Identities=22% Similarity=0.228 Sum_probs=21.2
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++++++++.|+++|+.||+|-+
T Consensus 107 ~~df~~Lv~~aH~~GikVilD~V 129 (686)
T 1qho_A 107 WTTFDTLVNDAHQNGIKVIVDFV 129 (686)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 57899999999999999999965
No 428
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=24.64 E-value=61 Score=27.21 Aligned_cols=32 Identities=19% Similarity=0.280 Sum_probs=26.7
Q ss_pred cCCCceecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 147 ANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 147 ~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.+|.+-..+.+.+.++++.|+++|+.+++|=.
T Consensus 50 v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~h 81 (334)
T 1fob_A 50 VNPSDGSYDLDYNLELAKRVKAAGMSLYLDLH 81 (334)
T ss_dssp SCCTTCTTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ECCCCCccCHHHHHHHHHHHHHCCCEEEEEec
Confidence 44666677788899999999999999999954
No 429
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=24.63 E-value=46 Score=28.62 Aligned_cols=48 Identities=13% Similarity=0.045 Sum_probs=30.9
Q ss_pred hhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh--cCccEEEEeccccCC
Q 018243 157 EYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d~~~~s~~K~~g 210 (359)
++++.+.++.++.+++|..||.- + .. .....+. ..+|++..-.+|+.|
T Consensus 232 ~d~~~~~~l~~~~~ipIa~dE~~-~-~~----~~~~~~~~~~~~d~v~~k~~~~GG 281 (382)
T 3dgb_A 232 NNRAGMVRLNASSPAPIMADESI-E-CV----EDAFNLAREGAASVFALKIAKNGG 281 (382)
T ss_dssp TCHHHHHHHHHHCSSCEEESTTC-S-SH----HHHHHHHHHTCCSEEEECHHHHTS
T ss_pred cCHHHHHHHHHhCCCCEEeCCCc-C-CH----HHHHHHHHcCCCCEEEecccccCC
Confidence 45788888888889999999862 1 11 1122222 367888888888533
No 430
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=24.57 E-value=1e+02 Score=26.57 Aligned_cols=79 Identities=14% Similarity=0.106 Sum_probs=47.7
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcC
Q 018243 109 KNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALG 188 (359)
Q Consensus 109 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~ 188 (359)
..+.|+.+++++..+.++.. ....+ +++-|. ++++.+.+++++.+++|..||.- + ..
T Consensus 214 ~vDaN~~w~~~~A~~~~~~L------~~~~i-~iEeP~----------~~~~~~~~l~~~~~iPIa~dE~~-~-~~---- 270 (391)
T 4e8g_A 214 AVDGNRSLPSRDALRLSREC------PEIPF-VLEQPC----------NTLEEIAAIRGRVQHGIYLDESG-E-DL---- 270 (391)
T ss_dssp EEECTTCCCHHHHHHHHHHC------TTSCE-EEESCS----------SSHHHHHHHGGGCCSCEEESTTC-C-SH----
T ss_pred EEeCCCCCCHHHHHHHHHHH------hhcCe-EEecCC----------ccHHHHHHHHhhCCCCEEeCCCC-C-CH----
Confidence 33455566777655555432 22345 777652 14678888888889999999962 1 11
Q ss_pred chhHhhh--cCccEEEEeccccCC
Q 018243 189 VPVRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 189 ~~~~~~~--~~~d~~~~s~~K~~g 210 (359)
..+..+. ..+|++..-.+|+.|
T Consensus 271 ~~~~~~~~~~a~d~v~ik~~~~GG 294 (391)
T 4e8g_A 271 STVIRAAGQGLCDGFGMKLTRIGG 294 (391)
T ss_dssp HHHHHHHHTTCCSEEEEEHHHHTS
T ss_pred HHHHHHHHcCCCCEEEeCccccCC
Confidence 1222222 357888888888544
No 431
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=24.43 E-value=1.6e+02 Score=22.86 Aligned_cols=36 Identities=22% Similarity=0.114 Sum_probs=26.0
Q ss_pred CceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEE
Q 018243 135 PTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 135 ~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 175 (359)
-.+.+|+++-. + +.|.... ..++.+++++||+.+|.
T Consensus 166 l~Pa~vicEi~-~-~dG~mar---~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 166 FKPAGVLCELT-N-DDGTMAR---APECIEFANKHNMALVT 201 (217)
T ss_dssp SCSCEEEEEBB-C-TTSSBCC---HHHHHHHHHHTTCEEEE
T ss_pred CCceEEEEEEe-C-CCCCccC---HHHHHHHHHHcCCCEEE
Confidence 35667777543 3 5577666 78899999999988775
No 432
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=24.41 E-value=1.5e+02 Score=23.22 Aligned_cols=36 Identities=19% Similarity=0.132 Sum_probs=27.0
Q ss_pred CceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEE
Q 018243 135 PTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 135 ~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 175 (359)
-.+..|+++-. + +.|.... +.++.+++++||+.++.
T Consensus 177 l~Pa~VicEi~-~-ddG~mar---~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 177 LVPITTICEMM-G-DDGNAMS---KNETKRYAEKHNLIYLS 212 (227)
T ss_dssp SCSEEEEEEEB-C-TTSSBCC---HHHHHHHHHHHTCCEEE
T ss_pred CCceEEEEEEe-C-CCCCcCC---HHHHHHHHHHcCCcEEE
Confidence 45667777554 3 5577777 78899999999998875
No 433
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=24.40 E-value=2.8e+02 Score=22.37 Aligned_cols=50 Identities=14% Similarity=0.264 Sum_probs=32.4
Q ss_pred CCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 115 TMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 115 ~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.++.+++....+.. .+..++++.. + .+.+.+.++.+.++++|+.+++|-.
T Consensus 116 ~l~~~~~~~~~~~~------~~~~~v~~~g--~------~~~~~~~~~~~~a~~~g~~v~~D~~ 165 (299)
T 3ikh_A 116 TFSLDEMIPHMADA------VAGDILLQQG--N------FSLDKTRALFQYARSRGMTTVFNPS 165 (299)
T ss_dssp HCCHHHHGGGGTTC------CTTCEEEECS--C------SCHHHHHHHHHHHHHTTCEEEECCC
T ss_pred cCCHHHHHHHHhhh------ccCCEEEECC--C------CCHHHHHHHHHHHHHcCCEEEEccc
Confidence 45666665433221 3456777632 1 2345678899999999999999964
No 434
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=24.36 E-value=2.3e+02 Score=22.70 Aligned_cols=66 Identities=11% Similarity=0.053 Sum_probs=35.7
Q ss_pred eEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcC
Q 018243 56 GLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRD 127 (359)
Q Consensus 56 ~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~ 127 (359)
.+++++|+..+=.++...+.+.|-+|++..-.-.. .. ......+.++..+..+- -|.+++++.+++
T Consensus 18 ~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~-~~--~~~~~~~~~~~~~~~Dl---~d~~~v~~~~~~ 83 (291)
T 3rd5_A 18 TVVITGANSGLGAVTARELARRGATVIMAVRDTRK-GE--AAARTMAGQVEVRELDL---QDLSSVRRFADG 83 (291)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HH--HHHTTSSSEEEEEECCT---TCHHHHHHHHHT
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHH-HH--HHHHHhcCCeeEEEcCC---CCHHHHHHHHHh
Confidence 47777777766665555554678777765433111 11 11222233444443321 178888888885
No 435
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=24.34 E-value=1.1e+02 Score=21.29 Aligned_cols=45 Identities=4% Similarity=-0.045 Sum_probs=29.7
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEe
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
.++..+.+++ .+.++|++.+-.+ |.. -...+..+|+++|++++.-
T Consensus 36 ~~~v~kai~~-------gka~lViiA~D~~-p~~------~~~~l~~lc~~~~VP~~~v 80 (122)
T 3o85_A 36 ANEALKQVNR-------GKAELVIIAADAD-PIE------IVLHLPLACEDKGVPYVFI 80 (122)
T ss_dssp HHHHHHHHHT-------TCCSEEEEETTCS-SGG------GGTTHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHc-------CCceEEEEeCCCC-hHH------HHHHHHHHHHHhCCCEEEE
Confidence 4566777775 6778888844333 221 2477888999999986553
No 436
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=24.26 E-value=52 Score=29.61 Aligned_cols=26 Identities=15% Similarity=0.244 Sum_probs=23.1
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEe
Q 018243 151 GRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
+..|+.+++++|.+.|+++|+-||--
T Consensus 209 ~~~YT~~di~eiv~yA~~rgI~VIPE 234 (507)
T 2gjx_A 209 THIYTAQDVKEVIEYARLRGIRVLAE 234 (507)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCEEEEC
Confidence 55789999999999999999998864
No 437
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=24.25 E-value=2e+02 Score=25.17 Aligned_cols=85 Identities=13% Similarity=0.042 Sum_probs=53.0
Q ss_pred cCCeEEecCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecCh
Q 018243 77 RGSEVILGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSV 156 (359)
Q Consensus 77 ~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~ 156 (359)
+-+-+.+.+|....-+. ....+.....+.+--++....+..++.+.++. .-..+|.+ -+.. -+|..
T Consensus 288 ~y~i~~iEdPl~~dD~~--g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~-------~a~d~i~i-kv~q-iGGit--- 353 (436)
T 2al1_A 288 RYPIVSIEDPFAEDDWE--AWSHFFKTAGIQIVADDLTVTNPKRIATAIEK-------KAADALLL-KVNQ-IGTLS--- 353 (436)
T ss_dssp HSCEEEEECCSCTTCHH--HHHHHHTTCCSEEEESTTTTTCHHHHHHHHHT-------TCCSEEEE-CHHH-HCCHH---
T ss_pred hCCcEEEECCCCCcCHH--HHHHHHhcCCCeEEECCcccCCHHHHHHHHHh-------CCCCEEEe-chhh-cCCHH---
Confidence 55567888887665555 33443332334443343333478999999985 44556666 3332 23433
Q ss_pred hhHHHHHHHHHHcCcEEEEe
Q 018243 157 EYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D 176 (359)
+..+++++|+++|+.+++=
T Consensus 354 -ea~~ia~lA~~~g~~~~~s 372 (436)
T 2al1_A 354 -ESIKAAQDSFAAGWGVMVS 372 (436)
T ss_dssp -HHHHHHHHHHHTTCEEEEE
T ss_pred -HHHHHHHHHHHcCCeEEEe
Confidence 4689999999999987664
No 438
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=24.07 E-value=50 Score=31.03 Aligned_cols=58 Identities=24% Similarity=0.120 Sum_probs=39.9
Q ss_pred CHHHHHHHhc--CCCCCccCCceeEEEEeccccCCC---------------ce-----------ecChhhHHHHHHHHHH
Q 018243 117 DIDLIEAAIR--DPKGEIVYPTTRLICLENTHANCG---------------GR-----------CLSVEYTDSVGEIAKK 168 (359)
Q Consensus 117 ~~~~l~~~l~--~~~~~~~~~~~~~v~i~~~~~~pt---------------G~-----------~~~~~~l~~i~~~~~~ 168 (359)
|++.+.+.|+ -..+ -++.+|++.|+..+.. |. .-+.++++++++.|++
T Consensus 53 dl~gi~~kLd~~yLk~----LGvtaIwL~Pi~~~~~~~~~~~g~~g~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~ 128 (683)
T 3bmv_A 53 DWQGIINKINDGYLTG----MGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHA 128 (683)
T ss_dssp CHHHHHHHHHTSTTGG----GTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHhcCHHHHHH----cCCCEEEeCccccCcccccccccccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHH
Confidence 7788877777 3221 3567888866543210 11 1135789999999999
Q ss_pred cCcEEEEecc
Q 018243 169 HGLKLHIDGA 178 (359)
Q Consensus 169 ~~~~li~D~a 178 (359)
+|+.||+|-+
T Consensus 129 ~GikVilD~V 138 (683)
T 3bmv_A 129 HNIKVIIDFA 138 (683)
T ss_dssp TTCEEEEEEC
T ss_pred CCCEEEEEEc
Confidence 9999999965
No 439
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=24.03 E-value=50 Score=30.74 Aligned_cols=59 Identities=17% Similarity=0.042 Sum_probs=39.6
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc-------------eecChhhHHHHHHHHHHcCcEEEEeccc
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG-------------RCLSVEYTDSVGEIAKKHGLKLHIDGAR 179 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG-------------~~~~~~~l~~i~~~~~~~~~~li~D~a~ 179 (359)
|++.+.+.|+-..+ -++.+|++.|....|.. ..-+.++++++++.|+++|+.||.|-+.
T Consensus 237 dl~Gi~~kLdYLk~----LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V~ 308 (645)
T 4aef_A 237 DLIGIKEKIDHLVN----LGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDGVF 308 (645)
T ss_dssp CHHHHHHTHHHHHH----HTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHhhHHHHH----cCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEecc
Confidence 66666665542111 36778888666543321 1224588999999999999999999763
No 440
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=23.98 E-value=96 Score=26.47 Aligned_cols=79 Identities=9% Similarity=0.036 Sum_probs=44.4
Q ss_pred CCCCCC-HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch
Q 018243 112 QDGTMD-IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP 190 (359)
Q Consensus 112 ~~~~~~-~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~ 190 (359)
.++.++ +++..+.++.. ....+.+++-|.. .++++.+.++.++.+++|..||.- ... ..
T Consensus 200 an~~~~d~~~A~~~~~~l------~~~~i~~iEqP~~--------~~~~~~~~~l~~~~~iPIa~dE~~--~~~----~~ 259 (374)
T 3sjn_A 200 LASKWHTCGHSAMMAKRL------EEFNLNWIEEPVL--------ADSLISYEKLSRQVSQKIAGGESL--TTR----YE 259 (374)
T ss_dssp CTTTTCSHHHHHHHHHHS------GGGCCSEEECSSC--------TTCHHHHHHHHHHCSSEEEECTTC--CHH----HH
T ss_pred CCCCCCCHHHHHHHHHHh------hhcCceEEECCCC--------cccHHHHHHHHhhCCCCEEeCCCc--CCH----HH
Confidence 445556 66544444432 1223456665432 245788888888889999999862 111 11
Q ss_pred hHhhh--cCccEEEEeccccCC
Q 018243 191 VRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 191 ~~~~~--~~~d~~~~s~~K~~g 210 (359)
...+. ..+|++..-.+|+-|
T Consensus 260 ~~~~l~~~~~d~v~~k~~~~GG 281 (374)
T 3sjn_A 260 FQEFITKSNADIVQPDITRCGG 281 (374)
T ss_dssp HHHHHHHHCCSEECCBTTTSSH
T ss_pred HHHHHHcCCCCEEEeCccccCC
Confidence 22221 367888888777533
No 441
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=23.94 E-value=50 Score=28.66 Aligned_cols=24 Identities=25% Similarity=0.279 Sum_probs=21.2
Q ss_pred hhhHHHHHHHHHHcCcEEEEeccc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGAR 179 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a~ 179 (359)
.+.++++++.|+++|+.+|+|-.+
T Consensus 113 l~~ld~vv~~a~~~Gi~VilDlH~ 136 (408)
T 1h4p_A 113 ESYLDQAIGWARNNSLKVWVDLHG 136 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEECCC
Confidence 467999999999999999999753
No 442
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=23.86 E-value=46 Score=30.19 Aligned_cols=58 Identities=19% Similarity=0.108 Sum_probs=37.8
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCC---ce-----------ecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG---GR-----------CLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt---G~-----------~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
|+..+.+.|+-..+ -++.+|++.|+...|. |. .-+.++++++++.|+++|+.||+|-+
T Consensus 29 dl~gi~~~Ldyl~~----LGv~~I~l~Pi~~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (543)
T 2zic_A 29 DLKGITSKLDYLQK----LGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLV 100 (543)
T ss_dssp CHHHHHHTHHHHHH----HTCSEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHH----cCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 66666654432110 2566788766554432 11 11357899999999999999999976
No 443
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=23.80 E-value=1.4e+02 Score=24.89 Aligned_cols=53 Identities=15% Similarity=0.021 Sum_probs=36.4
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEecccc---CCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHA---NCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~---~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
..++|++.+++ .+.+.|-+ ++.. +..+..+..+.+..+.++|.++|+.|++=.
T Consensus 124 a~~eL~r~~~~-------~g~~Gv~l-~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv~iH~ 179 (350)
T 2gwg_A 124 CIPELEKCVKE-------YGFVAINL-NPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPAMIHV 179 (350)
T ss_dssp GHHHHHHHHHT-------SCCCEEEE-CSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHHhc-------cCCeEEEE-CCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeEEECC
Confidence 56788888854 56777766 3321 011234566789999999999999988753
No 444
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=23.74 E-value=52 Score=30.25 Aligned_cols=58 Identities=19% Similarity=0.064 Sum_probs=38.0
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCC---ce-----------ecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG---GR-----------CLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt---G~-----------~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
|+..+.+.|+-..+ -++.+|++.++...|. |. .-+.++++++++.|+++|+.||+|-+
T Consensus 38 dl~gi~~~Ldyl~~----LGv~~i~l~Pi~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~V 109 (589)
T 3aj7_A 38 DMKGIASKLEYIKE----LGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLV 109 (589)
T ss_dssp CHHHHHHTHHHHHH----HTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHH----cCCCEEEECCcccCCCCCCCcCcccccccccccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 66666655432110 2566788766555442 21 01357899999999999999999976
No 445
>3b0z_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.45A {Salmonella enterica subsp}
Probab=29.35 E-value=17 Score=25.07 Aligned_cols=20 Identities=15% Similarity=0.104 Sum_probs=17.6
Q ss_pred HHHHHHHHHHcCcEEEEecc
Q 018243 159 TDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 159 l~~i~~~~~~~~~~li~D~a 178 (359)
-.+|+++|+++|+.|+.|-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (114)
T 3b0z_B 29 ALRIREIGAEHRVPTLEAPP 48 (114)
Confidence 47899999999999999964
No 446
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=23.58 E-value=3e+02 Score=22.43 Aligned_cols=46 Identities=22% Similarity=0.125 Sum_probs=32.2
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.+.+++.++ .+++.+++.+ +|. +.++.+++.+.|+++|+.++-..+
T Consensus 84 ~~~v~ea~~--------~Gi~~vVi~t-----~G~--~~~~~~~l~~~A~~~gi~viGPNc 129 (294)
T 2yv1_A 84 KDAVFEAID--------AGIELIVVIT-----EHI--PVHDTMEFVNYAEDVGVKIIGPNT 129 (294)
T ss_dssp HHHHHHHHH--------TTCSEEEECC-----SCC--CHHHHHHHHHHHHHHTCEEECSSC
T ss_pred HHHHHHHHH--------CCCCEEEEEC-----CCC--CHHHHHHHHHHHHHcCCEEEcCCC
Confidence 455666666 5677555412 233 356688999999999998887876
No 447
>2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58}
Probab=23.56 E-value=22 Score=27.36 Aligned_cols=16 Identities=19% Similarity=0.196 Sum_probs=13.1
Q ss_pred HHHcCcEEEEeccccc
Q 018243 166 AKKHGLKLHIDGARIF 181 (359)
Q Consensus 166 ~~~~~~~li~D~a~~~ 181 (359)
++..+.+||+||||.+
T Consensus 84 ~~~~~~vliIDEAq~l 99 (199)
T 2r2a_A 84 PENIGSIVIVDEAQDV 99 (199)
T ss_dssp GGGTTCEEEETTGGGT
T ss_pred cccCceEEEEEChhhh
Confidence 4556999999999865
No 448
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=23.53 E-value=1.2e+02 Score=20.86 Aligned_cols=45 Identities=9% Similarity=0.146 Sum_probs=29.6
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEe
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
..+..+.+++ .+.++|++.+-.. | .+-...+..+|+++|++++.-
T Consensus 25 ~~~v~kai~~-------gkakLViiA~D~~-~------~~~~~~l~~lc~~~~VP~~~v 69 (121)
T 2lbw_A 25 VKEVVKALRK-------GEKGLVVIAGDIW-P------ADVISHIPVLCEDHSVPYIFI 69 (121)
T ss_dssp HHHHHHHHHH-------SCCCEEEECTTCS-C------TTHHHHHHHHHHHTCCCEEEC
T ss_pred HHHHHHHHHc-------CCceEEEEeCCCC-H------HHHHHHHHHHHHhcCCcEEEE
Confidence 4456666664 6778888833222 2 123677889999999998643
No 449
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=23.46 E-value=91 Score=26.95 Aligned_cols=80 Identities=11% Similarity=0.003 Sum_probs=47.8
Q ss_pred CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch
Q 018243 111 NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP 190 (359)
Q Consensus 111 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~ 190 (359)
+.|+..++++..+.++.. ....+.+++-|.. .++++.+.++.++.+++|..||.- ... ..
T Consensus 216 DaN~~~~~~~A~~~~~~L------~~~~i~~iEeP~~--------~~~~~~~~~l~~~~~iPIa~dE~~--~~~----~~ 275 (400)
T 4dxk_A 216 EFHSMWQLLPAMQIAKAL------TPYQTFWHEDPIK--------MDSLSSLTRYAAVSPAPISASETL--GSR----WA 275 (400)
T ss_dssp ECTTCBCHHHHHHHHHHT------GGGCCSEEECCBC--------TTSGGGHHHHHHHCSSCEEECTTC--CHH----HH
T ss_pred ECCCCCCHHHHHHHHHHH------hhcCCCEEEcCCC--------cccHHHHHHHHHhCCCCEEecCCc--CCH----HH
Confidence 455666777655554432 1233567765432 235677788888889999999962 111 11
Q ss_pred hHhh--hcCccEEEEeccccCC
Q 018243 191 VRRL--VQAADSASVCLSKGLG 210 (359)
Q Consensus 191 ~~~~--~~~~d~~~~s~~K~~g 210 (359)
...+ ...+|++..-.+|+-|
T Consensus 276 ~~~~l~~~a~d~v~~d~~~~GG 297 (400)
T 4dxk_A 276 FRDLLETGAAGVVMLDISWCGG 297 (400)
T ss_dssp HHHHHHTTCCCEEEECTTTTTH
T ss_pred HHHHHHcCCCCEEEeCccccCC
Confidence 2222 2357899888888533
No 450
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=23.42 E-value=1.3e+02 Score=25.88 Aligned_cols=80 Identities=13% Similarity=0.095 Sum_probs=47.8
Q ss_pred CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch
Q 018243 111 NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP 190 (359)
Q Consensus 111 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~ 190 (359)
+.++.+++++..+.++.. .+..+.+++-|. +.++++.+.++.++.+++|+.||.- ... ..
T Consensus 205 D~n~~~~~~~a~~~~~~l------~~~~i~~iE~P~--------~~~~~~~~~~l~~~~~ipIa~dE~~--~~~----~~ 264 (392)
T 2poz_A 205 DLSGGLTTDETIRFCRKI------GELDICFVEEPC--------DPFDNGALKVISEQIPLPIAVGERV--YTR----FG 264 (392)
T ss_dssp ECTTCSCHHHHHHHHHHH------GGGCEEEEECCS--------CTTCHHHHHHHHHHCSSCEEECTTC--CHH----HH
T ss_pred ECCCCCCHHHHHHHHHHH------HhcCCCEEECCC--------CcccHHHHHHHHhhCCCCEEecCCc--CCH----HH
Confidence 445566777655555432 233466776543 2356788888888889999999962 111 12
Q ss_pred hHhhh--cCccEEEEeccccCC
Q 018243 191 VRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 191 ~~~~~--~~~d~~~~s~~K~~g 210 (359)
...+. ..+|++..-..|.-|
T Consensus 265 ~~~~i~~~~~d~v~ik~~~~GG 286 (392)
T 2poz_A 265 FRKIFELQACGIIQPDIGTAGG 286 (392)
T ss_dssp HHHHHTTTCCSEECCCTTTSSC
T ss_pred HHHHHHcCCCCEEecCccccCC
Confidence 22222 357888777777533
No 451
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=23.39 E-value=56 Score=27.57 Aligned_cols=24 Identities=13% Similarity=-0.013 Sum_probs=20.9
Q ss_pred hhhHHHHHHHHHHcCcEEEEeccc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGAR 179 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a~ 179 (359)
.+.++++++.|.++|+.+|+|-.+
T Consensus 83 l~~ld~vV~~a~~~Gi~vIlDlH~ 106 (340)
T 3qr3_A 83 ISKYDQLVQGCLSLGAYCIVDIHN 106 (340)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEEEEecC
Confidence 367889999999999999999754
No 452
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=23.19 E-value=93 Score=26.40 Aligned_cols=80 Identities=14% Similarity=0.120 Sum_probs=43.9
Q ss_pred CCCCCCCHHHHHHHhcCCCCCccCCc--eeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcC
Q 018243 111 NQDGTMDIDLIEAAIRDPKGEIVYPT--TRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALG 188 (359)
Q Consensus 111 ~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~ 188 (359)
+.++..+.++..+.++.. .+ ..+.+++-|. +.++++.+.++.++.+++|+.||.- + . .
T Consensus 191 Dan~~~~~~~a~~~~~~l------~~~~~~i~~iEqP~--------~~~d~~~~~~l~~~~~ipIa~dE~~-~-~----~ 250 (366)
T 1tkk_A 191 DANQGWRPKEAVTAIRKM------EDAGLGIELVEQPV--------HKDDLAGLKKVTDATDTPIMADESV-F-T----P 250 (366)
T ss_dssp ECTTCSCHHHHHHHHHHH------HHTTCCEEEEECCS--------CTTCHHHHHHHHHHCSSCEEECTTC-C-S----H
T ss_pred ECCCCCCHHHHHHHHHHH------hhcCCCceEEECCC--------CcccHHHHHHHHhhCCCCEEEcCCC-C-C----H
Confidence 344555666544444321 12 3456776542 2345777777777778888888852 1 1 1
Q ss_pred chhHhhh--cCccEEEEeccccCC
Q 018243 189 VPVRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 189 ~~~~~~~--~~~d~~~~s~~K~~g 210 (359)
.....+. ..+|++..-..|.-|
T Consensus 251 ~~~~~~i~~~~~d~v~ik~~~~GG 274 (366)
T 1tkk_A 251 RQAFEVLQTRSADLINIKLMKAGG 274 (366)
T ss_dssp HHHHHHHHHTCCSEEEECHHHHTS
T ss_pred HHHHHHHHhCCCCEEEeehhhhcC
Confidence 1122221 357888777777533
No 453
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=23.15 E-value=54 Score=30.11 Aligned_cols=59 Identities=12% Similarity=0.049 Sum_probs=38.5
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCC--c-----------eecChhhHHHHHHHHHHcCcEEEEeccc
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG--G-----------RCLSVEYTDSVGEIAKKHGLKLHIDGAR 179 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt--G-----------~~~~~~~l~~i~~~~~~~~~~li~D~a~ 179 (359)
|++.+.+.|+-..+ -+..+|++.|....|. | ..-+.++++++++.|+++|+-||.|-+.
T Consensus 174 ~~~gi~~~LdyLk~----LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 245 (588)
T 1j0h_A 174 DLQGIIDHLDYLVD----LGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVF 245 (588)
T ss_dssp CHHHHHHTHHHHHH----HTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHH----cCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 66665555542111 3577888866544332 1 1113588999999999999999999763
No 454
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=23.11 E-value=1e+02 Score=26.60 Aligned_cols=81 Identities=14% Similarity=0.132 Sum_probs=45.7
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc
Q 018243 110 NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV 189 (359)
Q Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 189 (359)
.+.++..+.++..+.++.. ....+.+++-|.. .++++.+.++.++.+++|..||.- ... .
T Consensus 213 vDan~~~~~~~A~~~~~~l------~~~~i~~iEeP~~--------~~~~~~~~~l~~~~~iPIa~dE~~--~~~----~ 272 (404)
T 4e5t_A 213 FGTHGQFTVSGAKRLARRL------EAYDPLWFEEPIP--------PEKPEDMAEVARYTSIPVATGERL--CTK----Y 272 (404)
T ss_dssp ECCCSCBCHHHHHHHHHHH------GGGCCSEEECCSC--------TTCHHHHHHHHHHCSSCEEECTTC--CHH----H
T ss_pred EeCCCCcCHHHHHHHHHHH------hhcCCcEEECCCC--------cccHHHHHHHHhhCCCCEEeCCCc--CCH----H
Confidence 3455566766544443321 1223456665432 235777888888888999999862 111 1
Q ss_pred hhHhh--hcCccEEEEeccccCC
Q 018243 190 PVRRL--VQAADSASVCLSKGLG 210 (359)
Q Consensus 190 ~~~~~--~~~~d~~~~s~~K~~g 210 (359)
....+ ...+|++..-.+|+-|
T Consensus 273 ~~~~~i~~~a~d~v~~d~~~~GG 295 (404)
T 4e5t_A 273 EFSRVLETGAASILQMNLGRVGG 295 (404)
T ss_dssp HHHHHHHHTCCSEECCCTTTSSC
T ss_pred HHHHHHHhCCCCEEecCccccCC
Confidence 12222 1357888888888544
No 455
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=23.05 E-value=57 Score=26.83 Aligned_cols=23 Identities=9% Similarity=-0.038 Sum_probs=20.1
Q ss_pred hhHHHHHHHHHHcCcEEEEeccc
Q 018243 157 EYTDSVGEIAKKHGLKLHIDGAR 179 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~a~ 179 (359)
+.++++++.|.++|+.+|+|-.+
T Consensus 72 ~~~~~~v~~~~~~gi~vild~h~ 94 (305)
T 1h1n_A 72 ADLIATVNAITQKGAYAVVDPHN 94 (305)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHCCCEEEEeccc
Confidence 56888999999999999999654
No 456
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=22.95 E-value=1.4e+02 Score=24.22 Aligned_cols=23 Identities=35% Similarity=0.333 Sum_probs=19.8
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.+.+.++.+.++++|+.+++|-.
T Consensus 145 ~~~~~~~~~~a~~~~~~v~~D~~ 167 (304)
T 3ry7_A 145 IPAIISAFEIAKAHGVTTVLNPA 167 (304)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHcCCEEEEeCC
Confidence 45688899999999999999964
No 457
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=22.82 E-value=1.6e+02 Score=20.80 Aligned_cols=45 Identities=4% Similarity=0.036 Sum_probs=29.8
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEe
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
..+..+.+++ .+.++|++.+-.. | .+-...+..+|+++|++++.-
T Consensus 37 ~~~v~kai~~-------gkakLViiA~D~~-p------~~~~~~l~~lc~~~~VP~~~v 81 (134)
T 2ale_A 37 ANEATKTLNR-------GISEFIIMAADCE-P------IEILLHLPLLCEDKNVPYVFV 81 (134)
T ss_dssp HHHHHHHHHH-------TCEEEEEEETTCS-S------GGGGTHHHHHHHHHTCCEEEE
T ss_pred chHHHHHHHh-------CCCeEEEEeCCCC-H------HHHHHHHHHHHHhcCCCEEEE
Confidence 4556666664 6788888844332 2 233678889999999996543
No 458
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=22.62 E-value=1.5e+02 Score=25.01 Aligned_cols=47 Identities=13% Similarity=0.147 Sum_probs=22.6
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEE
Q 018243 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHI 175 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 175 (359)
++.+.++..++ .+.+.|+++...+ |...+ +.++.|.++. +.|++||.
T Consensus 233 ~~~~~l~~~~~--------~g~~GiVle~~G~---Gn~p~-~~~~~l~~a~-~~Gi~VV~ 279 (337)
T 4pga_A 233 VTDTAYKALAQ--------NGAKALIHAGTGN---GSVSS-RVVPALQQLR-KNGTQIIR 279 (337)
T ss_dssp CCSHHHHHHHH--------TTCSEEEEEEBTT---TBCCT-TTHHHHHHHH-HTTCEEEE
T ss_pred CCHHHHHHHHh--------cCCCEEEEEEeCC---CCCCH-HHHHHHHHHH-HCCCEEEE
Confidence 35555555555 4566666655443 44332 3344444433 34554443
No 459
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=22.46 E-value=1.3e+02 Score=17.68 Aligned_cols=30 Identities=10% Similarity=0.029 Sum_probs=24.5
Q ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Q 018243 325 RVRIVVHHQISANDVHYTLSCFQKIYAGVC 354 (359)
Q Consensus 325 ~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 354 (359)
.++|.+..+.+.++-+.+++.|.+++.+..
T Consensus 2 ~i~I~~~~Grs~eqk~~L~~~it~~~~~~l 31 (65)
T 3ry0_A 2 LIRVTLLEGRSPQEVAALGEALTAAAHETL 31 (65)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 467776667899999999999999988753
No 460
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=22.41 E-value=1e+02 Score=25.55 Aligned_cols=49 Identities=10% Similarity=0.074 Sum_probs=34.9
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
.++|++.++ .+.+.|-+ ++. ..|..++.+.+..+.++|.++|+.+++-.
T Consensus 130 ~~el~~~~~--------~g~~Gv~l-~~~--~~~~~l~d~~~~p~~~~~~e~~lpv~iH~ 178 (334)
T 2hbv_A 130 CKEASRAVA--------AGHLGIQI-GNH--LGDKDLDDATLEAFLTHCANEDIPILVHP 178 (334)
T ss_dssp HHHHHHHHH--------HTCCCEEE-ESC--BTTBCTTSHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHH--------cCCeEEEE-CCC--CCCCCCCcHHHHHHHHHHHHCCCEEEECC
Confidence 466777664 56666666 332 33566667889999999999999888754
No 461
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=22.40 E-value=94 Score=25.97 Aligned_cols=81 Identities=22% Similarity=0.237 Sum_probs=43.9
Q ss_pred eecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhc
Q 018243 108 VKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVAL 187 (359)
Q Consensus 108 v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~ 187 (359)
+..+.|+..+.++..+.++.. ....+.+++-|.. + ++.+.+++++.+++|..||.- + ..
T Consensus 127 L~vDaN~~w~~~~A~~~~~~L------~~~~l~~iEqP~~-------~---~~~~~~l~~~~~iPIa~dEs~-~-~~--- 185 (327)
T 2opj_A 127 VRIDVNGAWDVDTAVRMIRLL------DRFELEYVEQPCA-------T---VDELAEVRRRVSVPIAADESI-R-RA--- 185 (327)
T ss_dssp EEEECTTCSCHHHHHHHHHHH------GGGCEEEEECCSS-------S---HHHHHHHHHHCSSCEEC------------
T ss_pred EEEECCCCCCHHHHHHHHHHH------HhcCCcEEeCCCC-------C---HHHHHHHHhhCCCCEEcCCCC-C-CH---
Confidence 344556666776655554432 2345778877642 1 567788888889999999962 1 11
Q ss_pred CchhHhh--hcCccEEEEeccccCC
Q 018243 188 GVPVRRL--VQAADSASVCLSKGLG 210 (359)
Q Consensus 188 ~~~~~~~--~~~~d~~~~s~~K~~g 210 (359)
.....+ ...+|++..-.+|.-|
T Consensus 186 -~~~~~~i~~~a~d~i~ik~~~~GG 209 (327)
T 2opj_A 186 -EDPLRVRDAEAADVVVLKVQPLGG 209 (327)
T ss_dssp -----CTTTTTCCSBEEECHHHHTS
T ss_pred -HHHHHHHHhCCCCEEEeCccccCC
Confidence 112222 1357788887777533
No 462
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=22.31 E-value=1.9e+02 Score=23.12 Aligned_cols=50 Identities=18% Similarity=0.143 Sum_probs=37.2
Q ss_pred CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 113 DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 113 ~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
++-+|.-++.+... -+..+|.+... ..+.+++.++.+.|++.|..+++|-
T Consensus 108 Dfi~~~~qi~ea~~--------~GAD~ilLi~a-------~l~~~~l~~l~~~a~~lGl~~lvEv 157 (251)
T 1i4n_A 108 DFYIDTVQVKLASS--------VGADAILIIAR-------ILTAEQIKEIYEAAEELGMDSLVEV 157 (251)
T ss_dssp CCCCSTHHHHHHHH--------TTCSEEEEEGG-------GSCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred eCCCCHHHHHHHHH--------cCCCEEEEecc-------cCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 35567777777655 56667777443 2445789999999999999999994
No 463
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=22.29 E-value=52 Score=30.22 Aligned_cols=59 Identities=10% Similarity=0.081 Sum_probs=38.6
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCC--c-----------eecChhhHHHHHHHHHHcCcEEEEeccc
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCG--G-----------RCLSVEYTDSVGEIAKKHGLKLHIDGAR 179 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~pt--G-----------~~~~~~~l~~i~~~~~~~~~~li~D~a~ 179 (359)
|+..+.+.|+-..+ -+...|++.|....|. | ..-+.++++++++.|+++|+-||.|-+.
T Consensus 171 ~~~gi~~~LdyLk~----LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~ 242 (585)
T 1wzl_A 171 DLKGVIDRLPYLEE----LGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVF 242 (585)
T ss_dssp CHHHHHHTHHHHHH----HTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CHHHHHHHhHHHHH----cCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 66666555542111 3567888866554332 1 1123588999999999999999999763
No 464
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=22.19 E-value=58 Score=27.24 Aligned_cols=24 Identities=33% Similarity=0.347 Sum_probs=20.9
Q ss_pred hhhHHHHHHHHHHcCcEEEEeccc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGAR 179 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a~ 179 (359)
.+.++++++.|+++|+.+|+|-.+
T Consensus 68 ~~~l~~~v~~a~~~Gi~vildlh~ 91 (343)
T 1ceo_A 68 LSYIDRCLEWCKKYNLGLVLDMHH 91 (343)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEecC
Confidence 367899999999999999999754
No 465
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=22.00 E-value=55 Score=27.88 Aligned_cols=80 Identities=14% Similarity=0.131 Sum_probs=46.9
Q ss_pred CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch
Q 018243 111 NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP 190 (359)
Q Consensus 111 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~ 190 (359)
+.|+..++++..+.++.. ....+.+++-|.. .++++.+.+++++.+++|..||.- + .. ..
T Consensus 194 DaN~~~~~~~A~~~~~~l------~~~~~~~iEeP~~--------~~d~~~~~~l~~~~~ipIa~dE~~-~-~~----~~ 253 (370)
T 2chr_A 194 DVNQAWDEQVASVYIPEL------EALGVELIEQPVG--------RENTQALRRLSDNNRVAIMADESL-S-TL----AS 253 (370)
T ss_dssp ECTTCCCTHHHHHHHHHH------HTTTCCEEECCSC--------SSCHHHHHHHHHHCSSEEEESSSC-C-SH----HH
T ss_pred cCCCCCCHHHHHHHHHHH------HhcCCceecCCCC--------hhhhhhhhHHhhhccCCccCCccC-C-CH----HH
Confidence 445555666544443321 1233557776553 346788999999999999999962 1 11 12
Q ss_pred hHhhh--cCccEEEEeccccCC
Q 018243 191 VRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 191 ~~~~~--~~~d~~~~s~~K~~g 210 (359)
...+. ..+|++..-.+|+-|
T Consensus 254 ~~~~~~~~a~d~i~~d~~~~GG 275 (370)
T 2chr_A 254 AFDLARDRSVDVFSLKLCNMGG 275 (370)
T ss_dssp HHHHHTTTCCSEECCCHHHHTS
T ss_pred HHHHHHcCCCcEEEeCCcccCC
Confidence 22222 357787777777533
No 466
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=21.84 E-value=59 Score=30.63 Aligned_cols=58 Identities=14% Similarity=0.106 Sum_probs=39.7
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCce-------------ecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGR-------------CLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~-------------~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
|++.+.+.|+-..+ -++.+|++.+....|... .-+.++++++++.|+++|+.||+|-+
T Consensus 263 dl~Gi~~kLdyLk~----LGvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V 333 (696)
T 4aee_A 263 DLAGIMKHIDHLED----LGVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDIT 333 (696)
T ss_dssp CHHHHHTTHHHHHH----HTCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHhHHHHH----cCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEecc
Confidence 66666655542111 367789997766544321 12358899999999999999999976
No 467
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=21.74 E-value=67 Score=28.91 Aligned_cols=26 Identities=12% Similarity=0.091 Sum_probs=23.2
Q ss_pred ceecChhhHHHHHHHHHHcCcEEEEe
Q 018243 151 GRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 151 G~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
|..|+.+++++|.+.|+++|+-||--
T Consensus 225 ~g~YT~~di~eiv~yA~~rgI~VIPE 250 (512)
T 1jak_A 225 GGYYTKAEYKEIVRYAASRHLEVVPE 250 (512)
T ss_dssp CCCBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEc
Confidence 46789999999999999999999854
No 468
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=21.47 E-value=1.3e+02 Score=26.00 Aligned_cols=78 Identities=10% Similarity=0.062 Sum_probs=46.7
Q ss_pred CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch
Q 018243 111 NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP 190 (359)
Q Consensus 111 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~ 190 (359)
+.++.+++++..+.++.. .+..+.+++-|.. .++++.+.++.++.+++|+.||.- .. ...
T Consensus 224 Dan~~~~~~~ai~~~~~l------~~~~i~~iE~P~~--------~~~~~~~~~l~~~~~iPIa~dE~~--~~----~~~ 283 (410)
T 2gl5_A 224 EIHSLLGTNSAIQFAKAI------EKYRIFLYEEPIH--------PLNSDNMQKVSRSTTIPIATGERS--YT----RWG 283 (410)
T ss_dssp ECTTCSCHHHHHHHHHHH------GGGCEEEEECSSC--------SSCHHHHHHHHHHCSSCEEECTTC--CT----THH
T ss_pred ECCCCCCHHHHHHHHHHH------HhcCCCeEECCCC--------hhhHHHHHHHHhhCCCCEEecCCc--CC----HHH
Confidence 445666777655555432 2334667765432 245788888888889999999962 11 112
Q ss_pred hHhhh--cCccEEEEecccc
Q 018243 191 VRRLV--QAADSASVCLSKG 208 (359)
Q Consensus 191 ~~~~~--~~~d~~~~s~~K~ 208 (359)
...+. ..+|++..-..|+
T Consensus 284 ~~~~i~~~~~d~v~ik~~~~ 303 (410)
T 2gl5_A 284 YRELLEKQSIAVAQPDLCLC 303 (410)
T ss_dssp HHHHHHTTCCSEECCCTTTT
T ss_pred HHHHHHcCCCCEEecCcccc
Confidence 22222 3578887777774
No 469
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=21.45 E-value=1.8e+02 Score=24.33 Aligned_cols=46 Identities=20% Similarity=0.143 Sum_probs=25.0
Q ss_pred CCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEE
Q 018243 116 MDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLH 174 (359)
Q Consensus 116 ~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li 174 (359)
++.+.++..++ ...+.|+++.... |... .+.++.|.++ .+.|++||
T Consensus 229 ~~~~~l~~~~~--------~g~~GiVle~~G~---Gn~p-~~~~~~l~~a-~~~Gi~VV 274 (327)
T 1o7j_A 229 DPEYLYDAAIQ--------HGVKGIVYAGMGA---GSVS-VRGIAGMRKA-LEKGVVVM 274 (327)
T ss_dssp CCTHHHHHHHH--------TTCSEEEEEEBTT---TBCC-HHHHHHHHHH-HHTTCEEE
T ss_pred CCHHHHHHHHh--------CCCCEEEEeeECC---CCCC-HHHHHHHHHH-HHCCceEE
Confidence 45666666666 4567777766554 4443 3334444444 34566544
No 470
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=21.44 E-value=1e+02 Score=26.22 Aligned_cols=77 Identities=13% Similarity=0.148 Sum_probs=42.9
Q ss_pred CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCchhH
Q 018243 113 DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVR 192 (359)
Q Consensus 113 ~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~ 192 (359)
++..+.++ .+.++.. .+..+.+++-|. +.++++.+.++.++.+++|..||.- + . .....
T Consensus 197 n~~~~~~~-~~~~~~l------~~~~i~~iEqP~--------~~~d~~~~~~l~~~~~ipIa~dE~~-~-~----~~~~~ 255 (375)
T 1r0m_A 197 NSAYTLAD-AGRLRQL------DEYDLTYIEQPL--------AWDDLVDHAELARRIRTPLCLDESV-A-S----ASDAR 255 (375)
T ss_dssp TTCCCGGG-HHHHHTT------GGGCCSCEECCS--------CTTCSHHHHHHHHHCSSCEEESTTC-C-S----HHHHH
T ss_pred CCCCCHHH-HHHHHHH------HhCCCcEEECCC--------CcccHHHHHHHHHhCCCCEEecCcc-C-C----HHHHH
Confidence 44445555 5555532 223344665432 2345677777888888888888862 1 1 11122
Q ss_pred hhh--cCccEEEEeccccCC
Q 018243 193 RLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 193 ~~~--~~~d~~~~s~~K~~g 210 (359)
.+. ..+|++..-..|+-|
T Consensus 256 ~~i~~~~~d~v~ik~~~~GG 275 (375)
T 1r0m_A 256 KALALGAGGVINLKVARVGG 275 (375)
T ss_dssp HHHHHTSCSEEEECTTTTTS
T ss_pred HHHHhCCCCEEEECcchhcC
Confidence 221 357888887777533
No 471
>2frh_A SARA, staphylococcal accessory regulator A; winged-helix protein, divalent metal binding, transcription; 2.50A {Staphylococcus aureus} SCOP: a.4.5.28 PDB: 2fnp_A 1fzp_D
Probab=21.41 E-value=1.9e+02 Score=19.72 Aligned_cols=54 Identities=17% Similarity=0.101 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhcCceec---cCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhhc
Q 018243 303 YAACLLKKLEEHGVLVM---PESSTRVRIVVHHQISANDVHYTLSCFQKIYAGVCEEN 357 (359)
Q Consensus 303 ~~~~~~~~l~~~gi~~~---~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 357 (359)
....+.+.|.+.|+... +.+....++.++ .--.+-++.+...+.+.++++..+.
T Consensus 69 tvs~~l~~Le~~Glv~r~~~~~D~R~~~i~LT-~~G~~~~~~~~~~~~~~~~~~~~~~ 125 (127)
T 2frh_A 69 QVVKAVKILSQEDYFDKKRNEHDERTVLILVN-AQQRKKIESLLSRVNKRITEANNEI 125 (127)
T ss_dssp HHHHHHHHHHHTTSSCCBCCSSSSCCCEEECC-SHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCEEecCCCCCCCeeEEEEC-HHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 56678889999998874 444555566654 2334567777777877777776543
No 472
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=21.35 E-value=1.4e+02 Score=24.03 Aligned_cols=98 Identities=14% Similarity=0.081 Sum_probs=44.4
Q ss_pred eEEcCCchHHHHH-HHHHhhhhcC-CeEEe-cCCCcceeeccccccccCCccceeeecCCCCCCCHHHHHHHhcCCCCCc
Q 018243 56 GLFVPSGTMGNLI-SVLVHCETRG-SEVIL-GDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEI 132 (359)
Q Consensus 56 ~~~~~~gt~a~~~-~l~~~~~~~g-~~vl~-~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~ 132 (359)
.+++++|+..+=. ++..+. +.| ..|.+ .+........ .....+++++..+.. |.+.+.+.++.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~-~~g~~~V~~~~R~~~~~~~~---~l~~~~~~~~~~D~~-----d~~~l~~~~~~----- 72 (299)
T 2wm3_A 7 LVVVFGGTGAQGGSVARTLL-EDGTFKVRVVTRNPRKKAAK---ELRLQGAEVVQGDQD-----DQVIMELALNG----- 72 (299)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HHCSSEEEEEESCTTSHHHH---HHHHTTCEEEECCTT-----CHHHHHHHHTT-----
T ss_pred EEEEECCCchHHHHHHHHHH-hcCCceEEEEEcCCCCHHHH---HHHHCCCEEEEecCC-----CHHHHHHHHhc-----
Confidence 4666666554443 334444 355 45543 3321110000 012234444444443 78889988873
Q ss_pred cCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCc
Q 018243 133 VYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGL 171 (359)
Q Consensus 133 ~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~ 171 (359)
+..|+....................+.+.|++.|+
T Consensus 73 ----~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv 107 (299)
T 2wm3_A 73 ----AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGL 107 (299)
T ss_dssp ----CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTC
T ss_pred ----CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCC
Confidence 33444312111000000011234567788888775
No 473
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=21.33 E-value=2.4e+02 Score=22.76 Aligned_cols=50 Identities=14% Similarity=0.052 Sum_probs=36.9
Q ss_pred CCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 113 DGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 113 ~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
++.+|..++.+... -+...|++... ..+.+++.++.+.|+++|+.++++-
T Consensus 120 dfiid~~qv~~A~~--------~GAD~VlLi~a-------~l~~~~l~~l~~~a~~lGl~~lvev 169 (272)
T 3qja_A 120 DFVVQPYQIHEARA--------HGADMLLLIVA-------ALEQSVLVSMLDRTESLGMTALVEV 169 (272)
T ss_dssp SCCCSHHHHHHHHH--------TTCSEEEEEGG-------GSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCHHHHHHHHH--------cCCCEEEEecc-------cCCHHHHHHHHHHHHHCCCcEEEEc
Confidence 46678888888877 56677777221 2235678999999999999988874
No 474
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=21.30 E-value=62 Score=30.16 Aligned_cols=58 Identities=12% Similarity=0.012 Sum_probs=39.1
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCc-----e-----------ecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGG-----R-----------CLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG-----~-----------~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
|+..+.+.|+-..+ -++.+|++.+....|.| . .-+.++++++++.|+++|+.||+|-+
T Consensus 104 dl~gi~~~LdyL~~----LGv~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp~~Gt~~df~~Lv~~aH~~GI~VilD~V 177 (644)
T 3czg_A 104 TLQGVAERVPYLQE----LGVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPSLGSNDDLVALTSRLREAGISLCADFV 177 (644)
T ss_dssp SHHHHHHTHHHHHH----HTCCEEEECCCBCBCSSCCTTTTSBSCTTSBCGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHH----cCCCEEEeCCCCcCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 56666555532110 26778999777665532 1 11357899999999999999999966
No 475
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=21.29 E-value=62 Score=27.12 Aligned_cols=21 Identities=10% Similarity=0.077 Sum_probs=18.8
Q ss_pred hhHHHHHHHHHHcCcEEEEec
Q 018243 157 EYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~ 177 (359)
+.++++.++|+++|+.+|+|-
T Consensus 91 ~~ld~~~~~a~~~Gi~vil~l 111 (353)
T 2c0h_A 91 SDMRAYLHAAQRHNILIFFTL 111 (353)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEEc
Confidence 468999999999999999974
No 476
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=21.27 E-value=2.7e+02 Score=21.03 Aligned_cols=65 Identities=11% Similarity=-0.029 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHHHhCCCCeEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeeec
Q 018243 38 PTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVKN 110 (359)
Q Consensus 38 ~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 110 (359)
+...++.+.+++-++.+-.+...+-.++...+-. + . .|..|++++..-.... .+..+..++.++.
T Consensus 14 ~~l~~~~~~i~~e~~~~i~i~~~~l~~~v~~a~~-~-~-~~~dVIISRGgta~~l-----r~~~~iPVV~I~~ 78 (196)
T 2q5c_A 14 ENLLNLFPKLALEKNFIPITKTASLTRASKIAFG-L-Q-DEVDAIISRGATSDYI-----KKSVSIPSISIKV 78 (196)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECCHHHHHHHHHH-H-T-TTCSEEEEEHHHHHHH-----HTTCSSCEEEECC
T ss_pred HHHHHHHHHHHhhhCCceEEEECCHHHHHHHHHH-h-c-CCCeEEEECChHHHHH-----HHhCCCCEEEEcC
Confidence 4444454555555555434555555455544444 3 3 6667888886633333 2334566777754
No 477
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=21.19 E-value=62 Score=30.01 Aligned_cols=43 Identities=12% Similarity=-0.021 Sum_probs=32.4
Q ss_pred ceeEEEEeccccCCCc-----e-----------ecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 136 TTRLICLENTHANCGG-----R-----------CLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 136 ~~~~v~i~~~~~~ptG-----~-----------~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
++.+|++.|+...|.| . .-+.++++++++.|+++|+.||+|-+
T Consensus 126 Gv~~I~L~Pi~~~~~~~~~~GY~v~dy~~vdp~~Gt~~d~~~Lv~~ah~~GI~VilD~V 184 (628)
T 1g5a_A 126 GLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDFI 184 (628)
T ss_dssp TCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEeCCCCCCCCCCCCCCcCCcccCCcCccCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 6778888776655532 1 11347899999999999999999965
No 478
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=21.18 E-value=93 Score=27.04 Aligned_cols=81 Identities=10% Similarity=0.094 Sum_probs=45.7
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCc
Q 018243 110 NNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGV 189 (359)
Q Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 189 (359)
.+.++..++++..+.++.. ....+.+++-|.. .++++.+.++.++.+++|..||.- ... .
T Consensus 206 vDaN~~~~~~~A~~~~~~L------~~~~i~~iEeP~~--------~~d~~~~~~l~~~~~iPIa~dE~~--~~~----~ 265 (412)
T 4e4u_A 206 FGTHGQMVPSSAIRLAKRL------EKYDPLWFEEPVP--------PGQEEAIAQVAKHTSIPIATGERL--TTK----Y 265 (412)
T ss_dssp ECCCSCBCHHHHHHHHHHH------GGGCCSEEECCSC--------SSCHHHHHHHHHTCSSCEEECTTC--CHH----H
T ss_pred EECCCCCCHHHHHHHHHHh------hhcCCcEEECCCC--------hhhHHHHHHHHhhCCCCEEecCcc--CCH----H
Confidence 3455566766544443321 1223456665432 235778888888888999999862 111 1
Q ss_pred hhHhh--hcCccEEEEeccccCC
Q 018243 190 PVRRL--VQAADSASVCLSKGLG 210 (359)
Q Consensus 190 ~~~~~--~~~~d~~~~s~~K~~g 210 (359)
....+ ...+|++..-.+|+-|
T Consensus 266 ~~~~~i~~~a~d~v~~d~~~~GG 288 (412)
T 4e4u_A 266 EFHKLLQAGGASILQLNVARVGG 288 (412)
T ss_dssp HHHHHHHTTCCSEECCCTTTTTS
T ss_pred HHHHHHHcCCCCEEEeCccccCC
Confidence 12222 1357888888888544
No 479
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=20.96 E-value=71 Score=25.39 Aligned_cols=50 Identities=18% Similarity=0.250 Sum_probs=32.1
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCC----CceecCh----hhHHHHHHHHHHcCcEEEEec
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANC----GGRCLSV----EYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~p----tG~~~~~----~~l~~i~~~~~~~~~~li~D~ 177 (359)
.+.+++.++ .++.+|.+=.... + +|. .+. +..+++.++|++||+.+|+++
T Consensus 46 ~~~~~~al~--------~Gv~~vqlR~K~~-~~~~~~~~-l~~~~~~~~a~~l~~l~~~~~~~liInd 103 (243)
T 3o63_A 46 AQFAEAALA--------GGVDIIQLRDKGS-PGELRFGP-LQARDELAACEILADAAHRYGALFAVND 103 (243)
T ss_dssp HHHHHHHHH--------TTCSEEEECCTTC-HHHHHHCS-CCHHHHHHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHH--------CCCCEEEEccCCC-CccccccC-CCHHHHHHHHHHHHHHHHhhCCEEEEeC
Confidence 567788888 6778888722221 1 011 112 234778899999999999965
No 480
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=20.85 E-value=22 Score=30.07 Aligned_cols=51 Identities=10% Similarity=0.013 Sum_probs=30.6
Q ss_pred eEEcCCchHHHHHHHHHhhhhcCCeEEecCCCcceeeccccccccCCccceeee
Q 018243 56 GLFVPSGTMGNLISVLVHCETRGSEVILGDNSHIHIYENGGISTIGGVHPRTVK 109 (359)
Q Consensus 56 ~~~~~~gt~a~~~~l~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~ 109 (359)
.+..++|..+.-.++.+....-...|++|...-.. .. ...+..|++++.++
T Consensus 90 Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~-k~--~~~~~~GA~Vv~v~ 140 (344)
T 3vc3_A 90 LIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLE-RR--VTMRAFGAELILTD 140 (344)
T ss_dssp EEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHH-HH--HHHHHTTCEEEEEC
T ss_pred EEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHH-HH--HHHHHcCCEEEEEC
Confidence 45667787777777766653333456666654222 22 23667888887764
No 481
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=20.84 E-value=1.9e+02 Score=23.17 Aligned_cols=72 Identities=13% Similarity=0.049 Sum_probs=39.1
Q ss_pred cceeeecCCCCCCCHHHHHHHhcCCCCCccCCceeEEEEec---cccCCCceecChhhHHHHHHHHHHcCcEEEEecccc
Q 018243 104 HPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLEN---THANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARI 180 (359)
Q Consensus 104 ~~~~v~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~---~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~ 180 (359)
.++.+.....+ +++++..+++-.... .+..+++++- +.. +.....-++..+..+.+.++.+||+|..|+
T Consensus 131 kPV~lk~G~~~--t~~e~~~Av~~i~~~---Gn~~i~L~~RG~~~~~---~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~ 202 (262)
T 1zco_A 131 NPVLLKRGMGN--TIQELLYSAEYIMAQ---GNENVILCERGIRTFE---TATRFTLDISAVPVVKELSHLPIIVDPSHP 202 (262)
T ss_dssp SCEEEECCTTC--CHHHHHHHHHHHHTT---TCCCEEEEECCBCCSC---CSSSSBCCTTHHHHHHHHBSSCEEECSSTT
T ss_pred CcEEEecCCCC--CHHHHHHHHHHHHHC---CCCeEEEEECCCCCCC---CcChhhcCHHHHHHHHhhhCCCEEEEcCCC
Confidence 45555433222 677777666422111 2334555531 211 111222246777777777799999999987
Q ss_pred cch
Q 018243 181 FNA 183 (359)
Q Consensus 181 ~~~ 183 (359)
.|.
T Consensus 203 ~g~ 205 (262)
T 1zco_A 203 AGR 205 (262)
T ss_dssp TCS
T ss_pred CCc
Confidence 554
No 482
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=20.82 E-value=63 Score=27.41 Aligned_cols=23 Identities=17% Similarity=0.124 Sum_probs=20.6
Q ss_pred hhHHHHHHHHHHcCcEEEEeccc
Q 018243 157 EYTDSVGEIAKKHGLKLHIDGAR 179 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~a~ 179 (359)
+.++++++.|.++|+.+|+|-.+
T Consensus 91 ~~ld~vVd~a~~~Gi~vIldlH~ 113 (353)
T 3l55_A 91 MRVKAIVEYAMNAGLYAIVNVHH 113 (353)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCT
T ss_pred HHHHHHHHHHHHCCCEEEEECCC
Confidence 67899999999999999999765
No 483
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=20.81 E-value=1.9e+02 Score=24.28 Aligned_cols=11 Identities=0% Similarity=0.108 Sum_probs=5.4
Q ss_pred ceeEEEEeccc
Q 018243 136 TTRLICLENTH 146 (359)
Q Consensus 136 ~~~~v~i~~~~ 146 (359)
..+.|+++...
T Consensus 242 g~~GiVle~~G 252 (332)
T 2wlt_A 242 HAKGVVIAGVG 252 (332)
T ss_dssp TCSEEEEEEBT
T ss_pred CCCEEEEeeEC
Confidence 45555554433
No 484
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=20.80 E-value=94 Score=25.22 Aligned_cols=47 Identities=15% Similarity=0.091 Sum_probs=29.5
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecC--hhhHHHHHHHHHHcCcEEEEecc
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLS--VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~--~~~l~~i~~~~~~~~~~li~D~a 178 (359)
+.+++++.++ ...++++ ++ |..-+ .+.+....+.+++++.++|+|-+
T Consensus 48 ~~~e~~e~~~---------~a~alvI-n~-----G~l~~~~~~~~~~a~~~a~~~~~PvVlDPV 96 (273)
T 3dzv_A 48 DPREFPQMFQ---------QTSALVL-NL-----GHLSQEREQSLLAASDYARQVNKLTVVDLV 96 (273)
T ss_dssp CGGGHHHHHT---------TCSEEEE-EC-----CSCCHHHHHHHHHHHHHHHHTTCCEEEECT
T ss_pred CHHHHHHHHH---------HCCeEEE-ec-----CCCChHHHHHHHHHHHHHHHcCCcEEEchh
Confidence 5667777666 3346666 42 33222 23455566668888999999975
No 485
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=20.75 E-value=1.2e+02 Score=25.73 Aligned_cols=79 Identities=10% Similarity=0.093 Sum_probs=42.5
Q ss_pred CCCCCCCHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecccccchhhhcCch
Q 018243 111 NQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVP 190 (359)
Q Consensus 111 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~ 190 (359)
+.++..++++ .+.++.. .+..+.+++-|. +.++++.+.++.++.+++|+.||.- . . ...
T Consensus 189 Dan~~~~~~~-~~~~~~l------~~~~i~~iE~P~--------~~~~~~~~~~l~~~~~ipIa~dE~~-~-~----~~~ 247 (368)
T 1sjd_A 189 DANTAYTLGD-APQLARL------DPFGLLLIEQPL--------EEEDVLGHAELARRIQTPICLDESI-V-S----ARA 247 (368)
T ss_dssp ECTTCCCGGG-HHHHHTT------GGGCCSEEECCS--------CTTCHHHHHHHHTTCSSCEEESTTC-C-S----HHH
T ss_pred eccCCCCHHH-HHHHHHH------HhcCCCeEeCCC--------ChhhHHHHHHHHHhCCCCEEECCCc-C-C----HHH
Confidence 3445556666 5555542 122344565432 1245677777777778888888851 1 1 111
Q ss_pred hHhhh--cCccEEEEeccccCC
Q 018243 191 VRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 191 ~~~~~--~~~d~~~~s~~K~~g 210 (359)
...+. ..+|++..-.+|.-|
T Consensus 248 ~~~~i~~~~~d~v~ik~~~~GG 269 (368)
T 1sjd_A 248 AADAIKLGAVQIVNIKPGRVGG 269 (368)
T ss_dssp HHHHHHTTCCSEEEECTTTTTS
T ss_pred HHHHHHcCCCCEEEecccccCC
Confidence 22221 357888887777533
No 486
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=20.70 E-value=1.9e+02 Score=24.56 Aligned_cols=47 Identities=11% Similarity=0.118 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh--hcCccEEEEeccccCC
Q 018243 158 YTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL--VQAADSASVCLSKGLG 210 (359)
Q Consensus 158 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~~d~~~~s~~K~~g 210 (359)
+++.+.++.++.+++|+.||.- . .. .....+ ...+|++..-..|.-|
T Consensus 225 ~~~~~~~l~~~~~iPI~~de~i-~-~~----~~~~~~i~~~~~d~v~ik~~~~GG 273 (379)
T 2rdx_A 225 SYEECQQVRRVADQPMKLDECV-T-GL----HMAQRIVADRGAEICCLKISNLGG 273 (379)
T ss_dssp SHHHHHHHHTTCCSCEEECTTC-C-SH----HHHHHHHHHTCCSEEEEETTTTTS
T ss_pred CHHHHHHHHhhCCCCEEEeCCc-C-CH----HHHHHHHHcCCCCEEEEeccccCC
Confidence 3666677776778888888851 1 11 112222 1368888888888544
No 487
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=20.70 E-value=3.6e+02 Score=22.20 Aligned_cols=40 Identities=13% Similarity=-0.066 Sum_probs=25.7
Q ss_pred ceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEecc
Q 018243 136 TTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 136 ~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~a 178 (359)
+.+++++....- + ...+.+.+.++.+.++++|+.+++|-.
T Consensus 129 ~~~~~~~~~~~l-~--~~~~~~~~~~~~~~a~~~g~~v~~Dp~ 168 (338)
T 3ljs_A 129 DALIFHACSNSM-T--DADIAEVTFEGMRRAQAAGAIVSFDLN 168 (338)
T ss_dssp TEEEEEEEGGGG-S--SHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEECChHh-c--CchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 456777633211 1 111235578888889999999999964
No 488
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=20.65 E-value=3.1e+02 Score=21.41 Aligned_cols=41 Identities=20% Similarity=0.375 Sum_probs=26.8
Q ss_pred eeEEEEeccccCCCceecChhhHHHHHHHHHHc-CcEEEEec
Q 018243 137 TRLICLENTHANCGGRCLSVEYTDSVGEIAKKH-GLKLHIDG 177 (359)
Q Consensus 137 ~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~-~~~li~D~ 177 (359)
...|++.+..-..+|+.+...-+++|.++.+.. +..|.+|+
T Consensus 139 ~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~~~~I~VdG 180 (227)
T 1tqx_A 139 INTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYKNLNIQVDG 180 (227)
T ss_dssp CSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTCEEEEES
T ss_pred cCEEEEeeeccCCCCcccchHHHHHHHHHHHhccCCeEEEEC
Confidence 445555444433567777666777777776655 78888897
No 489
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=20.57 E-value=65 Score=27.10 Aligned_cols=24 Identities=25% Similarity=0.426 Sum_probs=20.9
Q ss_pred hhhHHHHHHHHHHcCcEEEEeccc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGAR 179 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a~ 179 (359)
.+.++++++.|+++|+.+|+|-.+
T Consensus 94 ~~~ld~~v~~a~~~Gi~vild~h~ 117 (358)
T 1ece_A 94 LQVMDKIVAYAGQIGLRIILDRHR 117 (358)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEecCC
Confidence 467899999999999999999753
No 490
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=20.44 E-value=3.9e+02 Score=22.57 Aligned_cols=33 Identities=24% Similarity=0.157 Sum_probs=25.5
Q ss_pred eecChhhHHHHHHHHHHcCcE--EEEecccccchh
Q 018243 152 RCLSVEYTDSVGEIAKKHGLK--LHIDGARIFNAA 184 (359)
Q Consensus 152 ~~~~~~~l~~i~~~~~~~~~~--li~D~a~~~~~~ 184 (359)
.-+...++..+.+..++.+.. ||+|.+|+-+..
T Consensus 239 ~ny~~~di~~~~~~l~~~~lp~~VivD~SH~ns~k 273 (350)
T 1n8f_A 239 PNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSK 273 (350)
T ss_dssp CCCSHHHHHHHHHHHHHTTCCCCEEEECSGGGTTT
T ss_pred CCCCHHHHHHHHHHHHHcCCCCeEEEECCCcccCc
Confidence 445667888888777778999 999999865443
No 491
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=20.35 E-value=96 Score=26.39 Aligned_cols=46 Identities=7% Similarity=-0.057 Sum_probs=27.1
Q ss_pred hhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhh--hcCccEEEEecccc
Q 018243 157 EYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRL--VQAADSASVCLSKG 208 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~~d~~~~s~~K~ 208 (359)
++++.+.++.++.+++|+.||.- . .. .....+ ...+|++..-..|.
T Consensus 229 ~d~~~~~~l~~~~~iPI~~dE~~-~-~~----~~~~~~i~~~~~d~v~ik~~~~ 276 (371)
T 2ovl_A 229 DDLVGNARIVRESGHTIAGGENL-H-TL----YDFHNAVRAGSLTLPEPDVSNI 276 (371)
T ss_dssp TCHHHHHHHHHHHCSCEEECTTC-C-SH----HHHHHHHHHTCCSEECCCTTTT
T ss_pred ccHHHHHHHHhhCCCCEEeCCCC-C-CH----HHHHHHHHcCCCCEEeeCcccc
Confidence 45677777777778888888851 1 11 112222 13577777777774
No 492
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=20.34 E-value=98 Score=21.31 Aligned_cols=45 Identities=11% Similarity=0.152 Sum_probs=28.1
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEe
Q 018243 118 IDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 118 ~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D 176 (359)
.++..+.+++ .+.++|++.+-.+ |-+ -...+..+|++++++++.-
T Consensus 34 ~~~v~kal~~-------gka~lViiA~D~~-~~~------~~~~l~~lc~~~~Vp~~~~ 78 (120)
T 1vq8_F 34 TNETTKSIER-------GSAELVFVAEDVQ-PEE------IVMHIPELADEKGVPFIFV 78 (120)
T ss_dssp HHHHHHHHHH-------TCCSEEEEESCCS-SGG------GTTTHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHc-------CCceEEEEeCCCC-hHH------HHHHHHHHHHhcCCCEEEE
Confidence 4456666664 5677888744332 322 2477888899999886543
No 493
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=20.33 E-value=92 Score=27.12 Aligned_cols=22 Identities=5% Similarity=0.090 Sum_probs=13.2
Q ss_pred hhHHHHHHHHHHcC--cEEEEecc
Q 018243 157 EYTDSVGEIAKKHG--LKLHIDGA 178 (359)
Q Consensus 157 ~~l~~i~~~~~~~~--~~li~D~a 178 (359)
++++.+.+++++.+ +.|..||.
T Consensus 260 ~d~~~~~~l~~~~~~~ipIa~dE~ 283 (415)
T 2p3z_A 260 QQYEGYRELKRNAPAGMMVTSGEH 283 (415)
T ss_dssp TCHHHHHHHHHHSCTTCEEEECTT
T ss_pred chHHHHHHHHHhcCCCCcEEcCCC
Confidence 34566666666655 66666664
No 494
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=20.32 E-value=1.4e+02 Score=23.78 Aligned_cols=53 Identities=13% Similarity=0.058 Sum_probs=33.5
Q ss_pred CHHHHHHHhcCCCCCccCCceeEEEEeccccCCCceec---------ChhhHHHHHHHHHHcCcEEEEe
Q 018243 117 DIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCL---------SVEYTDSVGEIAKKHGLKLHID 176 (359)
Q Consensus 117 ~~~~l~~~l~~~~~~~~~~~~~~v~i~~~~~~ptG~~~---------~~~~l~~i~~~~~~~~~~li~D 176 (359)
+++.+.+.+++. + .+..+|++ |-.. -+|... +.+.++.+.++++++++.|++-
T Consensus 21 n~~~~~~~i~~a-~----~gadlvv~-PE~~-~~gy~~~~~~~a~~~~~~~~~~l~~~a~~~~~~iv~G 82 (266)
T 2e11_A 21 NRDYYGALLEPL-A----GQSDLVIL-PETF-TSGFSNEAIDKAEDMDGPTVAWIRTQAARLGAAITGS 82 (266)
T ss_dssp HHHHHHHHHGGG-T----TTCSEEEC-CTTT-TTCSCSGGGGGCEETTSHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHHHHh-c----CCCCEEEC-CCCc-cccCChhHHHhhccCCCHHHHHHHHHHHHhCCEEEEe
Confidence 455666666642 1 45677777 5444 335421 2246788999999999988864
No 495
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=20.29 E-value=1.1e+02 Score=26.29 Aligned_cols=48 Identities=25% Similarity=0.239 Sum_probs=28.4
Q ss_pred hhHHHHHHHHHHcCcEEEEecccccchhhhcCchhHhhh--cCccEEEEeccccCC
Q 018243 157 EYTDSVGEIAKKHGLKLHIDGARIFNAAVALGVPVRRLV--QAADSASVCLSKGLG 210 (359)
Q Consensus 157 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d~~~~s~~K~~g 210 (359)
++++.+.++.++.+++|+.||.- ... .....+. ..+|++..-..|.-|
T Consensus 232 ~d~~~~~~l~~~~~iPIa~dE~~--~~~----~~~~~~i~~~~~d~v~ik~~~~GG 281 (391)
T 2qgy_A 232 ENISLLTEIKNTFNMKVVTGEKQ--SGL----VHFRELISRNAADIFNPDISGMGG 281 (391)
T ss_dssp TCHHHHHHHHHHCSSCEEECTTC--CSH----HHHHHHHHTTCCSEECCBTTTSSC
T ss_pred hhHHHHHHHHhhCCCCEEEcCCc--CCH----HHHHHHHHcCCCCEEEECcchhCC
Confidence 45777777777778888888852 111 1122222 357887777777533
No 496
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=20.25 E-value=1.5e+02 Score=25.42 Aligned_cols=41 Identities=12% Similarity=0.112 Sum_probs=29.8
Q ss_pred ceeEEEEeccccCCCceecChhhHHHHHHHHHHcCcEEEEec
Q 018243 136 TTRLICLENTHANCGGRCLSVEYTDSVGEIAKKHGLKLHIDG 177 (359)
Q Consensus 136 ~~~~v~i~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~D~ 177 (359)
+...|.+ .++..|.|..++.+++.++.+.++++|+-+.+=+
T Consensus 44 G~~gIe~-~l~~~~~g~~w~~~~i~~lk~~l~~~GL~i~~i~ 84 (386)
T 3bdk_A 44 GMQGIVT-AVYDVPVGQAWPLENILELKKMVEEAGLEITVIE 84 (386)
T ss_dssp TCCEEEE-CCCSSCSSSCCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCEEEe-CCcccCCCCCCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 5556666 4455566777788889999999999998876543
No 497
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=20.06 E-value=66 Score=28.49 Aligned_cols=23 Identities=9% Similarity=0.147 Sum_probs=20.6
Q ss_pred hhhHHHHHHHHHHcCcEEEEecc
Q 018243 156 VEYTDSVGEIAKKHGLKLHIDGA 178 (359)
Q Consensus 156 ~~~l~~i~~~~~~~~~~li~D~a 178 (359)
.+.++++++.|+++|+.+|+|-.
T Consensus 71 l~~ld~vv~~a~~~Gl~VIlDlH 93 (464)
T 1wky_A 71 IQTVRNLISLAEDNNLVAVLEVH 93 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 46799999999999999999964
Done!