Citrus Sinensis ID: 018244

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
Protein Sequence
MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVSCFLFSSQFTYALLRLHIWSSSQIQQPARLCFVKPPELLR
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccEEEEEccccEEEEEEccccccccHHHHHHHHHHHHHccccccccEEcccccccEEEEEEEEcccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEccccccHHHHHccccccccccccHHHHHHHHHccccccccHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHccccccccccccccccHHHHHHHHcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEEEEcccccccccccccccccccccccccccccccEcHHHHHHHHccccHHcHHHHccccccccEEccEcccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHEEEEEEccccEEEEEEEcccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccEEEEcHHHHHEEEccccccHHcHccHHEEcccccEEEEEEccccHHHHHcccccccHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHccHHHcccccHHHHHHHHHHHHHHHcccHcccccHHHHHHHHccccccccccccccccccccccccccccccccHHHcHHHccccHHHHcc
Coil and Loop (DISEMBL)
mgcecsklsaccsgseygeaapeaqdveneekpgvdnvpvFCEYSIETLRTATSGFAMENIVsehgekapnvvykgkLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVaeympndtlAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHdlnayrivfdddvnprlscfglmknsrdgrsystnlaftppeylrtgrvtpesvMYSFGTLLLDLlsgkhippshaldlirdrniqtltdsclegqfssdeGTELVRLASRclqyeprerpnprSLVTALVTLQKdtevscflfssQFTYALLRLHIWsssqiqqparlcfvkppellr
Flexible Loop (DISEMBL)
mgcecsklsaccsgseyGEAAPEAQDveneekpgvdnVPVFCEYSIETLRTATSGFAMENIVSehgekapnvvyKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLmknsrdgrsystnlaftppeylrtgrvTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLegqfssdegtELVRLASRCLqyeprerpnprsLVTALVTLQKDTEVSCFLFSSQFTYALLRLHIWSssqiqqparlcfvkppellr
Low Complexity Region (SEG)
MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVSCFLFSSQFTYALLRLHIWSSSQIQQPARLCFVKPPELLR
Disordered region (IsUnstruct)
***********************************DNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS***GTELVRLASRCLQY*********SLVTALVTLQKDTEVSCFLFSSQFTYALLRLHIWSSSQIQQPARLCFV*******
Disordered Region (DISOPRED)
****************************************FCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL**********************************************
Disordered Region (DISEMBL)
********SACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVSCFLFSSQFTYALLRLHIWSSSQIQQPARLCFVKPPELLR
Disordered Region (DISPRO)
*GCECSKLSACCSG************************PVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD*******************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVSCFLFSSQFTYALLRLHIWSSSQIQQPARLCFVKPPELLR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	359	2.2.26 [Sep-21-2011]
Q9FHD7	487	Probable serine/threonine	yes	no	0.891	0.657	0.8	1e-156
Q944A7	512	Probable serine/threonine	no	no	0.799	0.560	0.679	1e-118
Q7XJT7	465	Probable inactive recepto	no	no	0.835	0.645	0.450	4e-75
Q06548	410	Protein kinase APK1A, chl	no	no	0.860	0.753	0.319	9e-39
Q9SFT7	414	Serine/threonine-protein	no	no	0.774	0.671	0.347	1e-36
P46573	412	Protein kinase APK1B, chl	no	no	0.777	0.677	0.322	1e-36
Q8H186	389	Probable receptor-like pr	no	no	0.746	0.688	0.323	3e-36
P43298	942	Probable receptor protein	no	no	0.743	0.283	0.322	7e-35
Q8GXZ3	410	Serine/threonine-protein	no	no	0.766	0.670	0.330	1e-34
O48814	395	Serine/threonine-protein	no	no	0.796	0.724	0.314	1e-34

>sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1

 Score =  550 bits (1418), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 256/320 (80%), Positives = 289/320 (90%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MGCE SKLSA C  SE G + P+   ++ E +   +++P F E+SIET+R ATSGFA EN
Sbjct: 1   MGCEVSKLSALCCVSESGRSNPDVTGLDEEGRGESNDLPQFREFSIETIRNATSGFAAEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGE+APNVVYKGKLENQ RIAVKRFNR +WPD+RQFLEEA+AVGQLRN R+ANLLG
Sbjct: 61  IVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CC E +ERLL+AE+MPN+TLAKHLFHWE+QPMKWAMRLRVALHIA+ALEYCTSK RALYH
Sbjct: 121 CCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYR++FDDD NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240

Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
           LLLDLLSGKHIPPSHALDLIRDRNIQ L DS LEGQFSSD+GTEL+RLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRER 300

Query: 301 PNPRSLVTALVTLQKDTEVS 320
           PNP+SLV+A++ LQKD E++
Sbjct: 301 PNPKSLVSAMIPLQKDLEIA 320

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q944A7|Y4523_ARATH Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1

 Score =  426 bits (1095), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 195/287 (67%), Positives = 240/287 (83%)

Query: 38  VPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA 97
           +P F E+S   L+ AT+ F+ +NIVSE GEKAPN+VYKG+L+N+  IAVK+F + AWP+ 
Sbjct: 55  IPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPEP 114

Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 157
           +QF EEA  VG+LR+ RLANL+G CC+GDERLLVAE+MPNDTLAKHLFHWE Q ++WAMR
Sbjct: 115 KQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMR 174

Query: 158 LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 217
           LRV  +IAEAL+YC+++ R LYHDLNAYR++FD+D +PRLSCFGLMKNSRDG+SYSTNLA
Sbjct: 175 LRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLA 234

Query: 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277
           +TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR +NI  L DS LEG+F
Sbjct: 235 YTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKF 294

Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVSCFLF 324
           S++E T +V LAS+CLQYEPRERPN + LV  L  LQ  ++V  ++ 
Sbjct: 295 STEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVM 341

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q7XJT7|SSP_ARATH Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1

 Score =  281 bits (720), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 145/322 (45%), Positives = 208/322 (64%), Gaps = 22/322 (6%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MGC C  LS+     +         D  +E + G    P   ++S   L+TAT+ F+ EN
Sbjct: 1   MGC-CYSLSSTVDPVQ-----DHTTDASSEPRNGGGEDPPLTKFSFSALKTATNHFSPEN 54

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVS+   +  +VV+KG+L+N   +A+KRFN  AW D + FLEEA+ VG+LR++RL NL+G
Sbjct: 55  IVSD---QTSDVVFKGRLQNGGFVAIKRFNNMAWSDPKLFLEEAQRVGKLRHKRLVNLIG 111

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
            CC+GD+R LVA++M NDTLAK LF  + Q M W++RLRVA  +AEAL+YC +   A Y+
Sbjct: 112 YCCDGDKRFLVADFMANDTLAKRLFQRKYQTMDWSIRLRVAYFVAEALDYCNTAGFASYN 171

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           +L+AY+++FD+D +  LSCFGLMK   + +             + TG V PE+V+Y FGT
Sbjct: 172 NLSAYKVLFDEDGDACLSCFGLMKEINNDQ-------------ITTGSVNPENVIYRFGT 218

Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
           +L++LLSGK IPPSHA ++I  +N+  L D  L+G+FS DE   + +LAS+CL+YE +E 
Sbjct: 219 VLVNLLSGKQIPPSHAPEMIHRKNVFKLMDPYLKGKFSIDEANVVYKLASQCLKYEGQES 278

Query: 301 PNPRSLVTALVTLQKDTEVSCF 322
           PN + +V  L TLQ  TE   +
Sbjct: 279 PNTKEIVATLETLQTRTEAPSY 300

Probable inactive protein kinase that activates the YODA MAP kinase cascade, regulating the asymmetric first division, and thus embryo polarity. Acts as an adapter at the plasma membrane, possibly recruiting an activator.

Arabidopsis thaliana (taxid: 3702)

>sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1

 Score =  161 bits (407), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 168/347 (48%), Gaps = 38/347 (10%)

Query: 3   CECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDN----VPVFCEYSIETLRTATSGFAM 58
            E S  S      + G    +A  V     P  +      P    +S   L++AT  F  
Sbjct: 11  AESSGASTKYDAKDIGSLGSKASSVSVRPSPRTEGEILQSPNLKSFSFAELKSATRNFRP 70

Query: 59  ENIVSEHGEKAPNVVYKGKLENQ----------FRIAVKRFNRSAWPDARQFLEEARAVG 108
           ++++   GE     V+KG ++ +            IAVK+ N+  W   +++L E   +G
Sbjct: 71  DSVL---GEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLG 127

Query: 109 QLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAE 166
           Q  +R L  L+G C E + RLLV E+MP  +L  HLF      QP+ W +RL+VAL  A+
Sbjct: 128 QFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAK 187

Query: 167 ALEYCTSKE-RALYHDLNAYRIVFDDDVNPRLSCFGLMKNS--RDGRSYSTNL----AFT 219
            L +  S E R +Y D     I+ D + N +LS FGL K+    D    ST +     + 
Sbjct: 188 GLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYA 247

Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP----PSHALD--------LIRDRNIQT 267
            PEYL TG +T +S +YSFG +LL+LLSG+       PS   +        L+  R I  
Sbjct: 248 APEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFR 307

Query: 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314
           + D+ L+ Q+S +E  ++  L+ RCL  E + RPN   +V+ L  +Q
Sbjct: 308 VIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQ 354

Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SFT7|Y3707_ARATH Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1

 Score =  154 bits (389), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/314 (34%), Positives = 156/314 (49%), Gaps = 36/314 (11%)

Query: 25  QDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRI 84
           Q+  N+E   V N      +S   L TAT  F  E ++   GE     VYKGKLE    I
Sbjct: 48  QNKNNDEDKEVTNNIAAQTFSFRELATATKNFRQECLI---GEGGFGRVYKGKLEKTGMI 104

Query: 85  -AVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKH 143
            AVK+ +R+     ++F+ E   +  L ++ L NL+G C +GD+RLLV EYM   +L  H
Sbjct: 105 VAVKQLDRNGLQGNKEFIVEVLMLSLLHHKHLVNLIGYCADGDQRLLVYEYMSRGSLEDH 164

Query: 144 LFHW--ETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSC 199
           L     +  P+ W  R+R+AL  A  LEY   K     +Y DL A  I+ D + N +LS 
Sbjct: 165 LLDLTPDQIPLDWDTRIRIALGAAMGLEYLHDKANPPVIYRDLKAANILLDGEFNAKLSD 224

Query: 200 FGLMKNS--RDGRSYSTNL----AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP 253
           FGL K     D +  S+ +     +  PEY RTG++T +S +YSFG +LL+L++G+ +  
Sbjct: 225 FGLAKLGPVGDKQHVSSRVMGTYGYCAPEYQRTGQLTTKSDVYSFGVVLLELITGRRV-- 282

Query: 254 SHALDLIRDRNIQTLT-----------------DSCLEGQFSSDEGTELVRLASRCLQYE 296
              +D  R ++ Q L                  D  LEG F      + V +A+ CLQ E
Sbjct: 283 ---IDTTRPKDEQNLVTWAQPVFKEPSRFPELADPSLEGVFPEKALNQAVAVAAMCLQEE 339

Query: 297 PRERPNPRSLVTAL 310
              RP    +VTAL
Sbjct: 340 ATVRPLMSDVVTAL 353

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2

 Score =  154 bits (388), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 160/313 (51%), Gaps = 34/313 (10%)

Query: 39  PVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQ----------FRIAVKR 88
           P    ++   L+ AT  F  ++++ E G  +   V+KG ++ Q            IAVK+
Sbjct: 52  PNLKSFTFAELKAATRNFRPDSVLGEGGFGS---VFKGWIDEQTLTASKPGTGVVIAVKK 108

Query: 89  FNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE 148
            N+  W   +++L E   +GQ  +  L  L+G C E + RLLV E+MP  +L  HLF   
Sbjct: 109 LNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRG 168

Query: 149 T--QPMKWAMRLRVALHIAEALEYCTSKERA-LYHDLNAYRIVFDDDVNPRLSCFGLMKN 205
           +  QP+ W +RL+VAL  A+ L +  + E + +Y D     I+ D + N +LS FGL K+
Sbjct: 169 SYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKD 228

Query: 206 --SRDGRSYSTNL----AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-----KHIPPS 254
             + D    ST +     +  PEYL TG +T +S +YS+G +LL++LSG     K+ PP 
Sbjct: 229 GPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPG 288

Query: 255 HAL-------DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 307
                      L   R +  + D+ L+ Q+S +E  ++  LA RCL +E + RPN   +V
Sbjct: 289 EQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVV 348

Query: 308 TALVTLQKDTEVS 320
           + L  +Q   E  
Sbjct: 349 SHLEHIQTLNEAG 361

Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8H186|Y3545_ARATH Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1

 Score =  152 bits (385), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 155/303 (51%), Gaps = 35/303 (11%)

Query: 44  YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLE----------NQFRIAVKRFNRSA 93
           +S   L+ AT  F  +++V   GE     V++G L+          +   IAVKR N   
Sbjct: 49  FSFNELKLATRNFRSDSVV---GEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDG 105

Query: 94  WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF---HWETQ 150
           +   R++L E   +GQL +  L  L+G C E ++RLLV E+M   +L  HLF   + + +
Sbjct: 106 FQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFK 165

Query: 151 PMKWAMRLRVALHIAEALEYCTSKE-RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209
           P+ W +R++VAL  A+ L +  S   + +Y D+ A  I+ D D N +LS FGL ++   G
Sbjct: 166 PLSWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMG 225

Query: 210 -RSYST-----NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK----HIPPSHALDL 259
            +SY +        +  PEY+ TG +   S +YSFG +LL+LL G+    H  P+   +L
Sbjct: 226 EQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNL 285

Query: 260 I--------RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311
           +          R +  + D+ L  Q+  +    L  +A +CL +EP+ RP    +V ALV
Sbjct: 286 VDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRALV 345

Query: 312 TLQ 314
            LQ
Sbjct: 346 QLQ 348

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P43298|TMK1_ARATH Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=2 SV=1

 Score =  148 bits (373), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 166/307 (54%), Gaps = 40/307 (13%)

Query: 45  SIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRS--AWPDARQFLE 102
           SI+ LR+ T+ F+ +NI+   G     VVYKG+L +  +IAVKR      A     +F  
Sbjct: 577 SIQVLRSVTNNFSSDNIL---GSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKS 633

Query: 103 EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ---PMKWAMRLR 159
           E   + ++R+R L  LLG C +G+E+LLV EYMP  TL++HLF W  +   P+ W  RL 
Sbjct: 634 EIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLT 693

Query: 160 VALHIAEALEYC--TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-SYSTNL 216
           +AL +A  +EY    + +  ++ DL    I+  DD+  +++ FGL++ + +G+ S  T +
Sbjct: 694 LALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRI 753

Query: 217 AFT----PPEYLRTGRVTPESVMYSFGTLLLDLLSGK----HIPPSHALDLI-------- 260
           A T     PEY  TGRVT +  +YSFG +L++L++G+       P  ++ L+        
Sbjct: 754 AGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKSLDESQPEESIHLVSWFKRMYI 813

Query: 261 -RDRNIQTLTDSCLEGQFSSDEGT-----ELVRLASRCLQYEPRERPN---PRSLVTALV 311
            ++ + +   D+ ++     DE T      +  LA  C   EP +RP+     +++++LV
Sbjct: 814 NKEASFKKAIDTTID----LDEETLASVHTVAELAGHCCAREPYQRPDMGHAVNILSSLV 869

Query: 312 TLQKDTE 318
            L K ++
Sbjct: 870 ELWKPSD 876

Probable receptor.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8GXZ3|Y5102_ARATH Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 PE=1 SV=1

 Score =  147 bits (371), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 147/306 (48%), Gaps = 31/306 (10%)

Query: 44  YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRI-------AVKRFNRSAWPD 96
           +++  L T T  F  + I+ E G      VYKG +++  R+       AVK  N+     
Sbjct: 57  FTLFELETITKSFRPDYILGEGGF---GTVYKGYIDDNLRVGLKSLPVAVKVLNKEGLQG 113

Query: 97  ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAM 156
            R++L E   +GQLR+  L  L+G CCE D RLLV E+M   +L  HLF   T P+ W+ 
Sbjct: 114 HREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMLRGSLENHLFRKTTAPLSWSR 173

Query: 157 RLRVALHIAEALEYCTSKER-ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
           R+ +AL  A+ L +  + ER  +Y D     I+ D D   +LS FGL K    G     S
Sbjct: 174 RMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVS 233

Query: 214 TNL----AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK----HIPPSHALDLI----- 260
           T +     +  PEY+ TG +T  S +YSFG +LL++L+G+       PS   +L+     
Sbjct: 234 TRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLEMLTGRKSVDKTRPSKEQNLVDWARP 293

Query: 261 ---RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ--K 315
                R +  + D  LE Q+S     +   LA  CL   P+ RP    +V  L  LQ   
Sbjct: 294 KLNDKRKLLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCTG 353

Query: 316 DTEVSC 321
           D  + C
Sbjct: 354 DALIPC 359

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O48814|BIK1_ARATH Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1

 Score =  147 bits (370), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 161/324 (49%), Gaps = 38/324 (11%)

Query: 24  AQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQ-- 81
           AQ  E E    + + PV   ++   L+ AT  F  ++++   GE     V+KG L+    
Sbjct: 39  AQKTEGEI---LSSTPV-KSFTFNELKLATRNFRPDSVI---GEGGFGCVFKGWLDESTL 91

Query: 82  --------FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133
                     IAVK+ N+  +   R++L E   +GQL +  L  L+G C E + RLLV E
Sbjct: 92  TPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYE 151

Query: 134 YMPNDTLAKHLFHWET--QPMKWAMRLRVALHIAEALEYCTSKE-RALYHDLNAYRIVFD 190
           +M   +L  HLF      +P+ W +R+ VAL  A+ L +  S   + +Y D+ A  I+ D
Sbjct: 152 FMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLD 211

Query: 191 DDVNPRLSCFGLMKNSRDGR-SYST-----NLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
            D N +LS FGL ++   G  SY +        +  PEY+ +G +   S +YSFG LLL+
Sbjct: 212 ADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLE 271

Query: 245 LLSGK----HIPPSHALDLI--------RDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292
           +LSGK    H  P+   +L+          R +  + D+ L+ Q+  +E   +  +A +C
Sbjct: 272 ILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQC 331

Query: 293 LQYEPRERPNPRSLVTALVTLQKD 316
           L +EP+ RP    +V AL  LQ +
Sbjct: 332 LSFEPKSRPTMDQVVRALQQLQDN 355

Required to activate the resistance responses to necrotrophic pathogens. Phosphorylates FLS2 and BAK1.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	359
224071868	487	predicted protein [Populus trichocarpa]	0.888	0.655	0.849	1e-161
224058519	488	predicted protein [Populus trichocarpa]	0.888	0.653	0.830	1e-160
225426412	488	PREDICTED: probable serine/threonine-pro	0.888	0.653	0.846	1e-159
225454188	491	PREDICTED: probable serine/threonine-pro	0.888	0.649	0.833	1e-158
297805526	487	kinase family protein [Arabidopsis lyrat	0.891	0.657	0.803	1e-155
356520418	491	PREDICTED: probable serine/threonine-pro	0.888	0.649	0.811	1e-154
15237604	487	putative serine/threonine-protein kinase	0.891	0.657	0.8	1e-154
357520451	495	Protein kinase-like protein [Medicago tr	0.888	0.644	0.822	1e-154
449452322	486	PREDICTED: probable serine/threonine-pro	0.883	0.652	0.830	1e-153
356504529	491	PREDICTED: probable serine/threonine-pro	0.888	0.649	0.802	1e-153

>gi|224071868|ref|XP_002303586.1| predicted protein [Populus trichocarpa] gi|222841018|gb|EEE78565.1| predicted protein [Populus trichocarpa]

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 271/319 (84%), Positives = 294/319 (92%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MGCECSKLS CC  S+Y  + PE ++  NEEK  +D++P F EY+IETLR ATSGF++EN
Sbjct: 1   MGCECSKLSKCCWSSDYNGSVPEDRNEVNEEKSELDDLPAFREYNIETLRMATSGFSVEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGEKAPNVVYKGKLENQ R+AVKRFNRSAWPDARQFLEEARAVGQLRN RLANLLG
Sbjct: 61  IVSEHGEKAPNVVYKGKLENQRRVAVKRFNRSAWPDARQFLEEARAVGQLRNHRLANLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CC EGDERLLVAE+MPNDTLAKHLFHWET+PMKWAMRLRVALH+A+ALEYCTSK RALYH
Sbjct: 121 CCGEGDERLLVAEFMPNDTLAKHLFHWETKPMKWAMRLRVALHLAQALEYCTSKGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYRIVFDD+ NPRLSCFGLMKN RDG+SYSTNLAFTPPEYLRTGRV PESV+YSFGT
Sbjct: 181 DLNAYRIVFDDEGNPRLSCFGLMKNRRDGKSYSTNLAFTPPEYLRTGRVIPESVIYSFGT 240

Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
           LLLDLLSGKHIPPSHALDLIRDRNIQ LTDSCLEGQF++D+GTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLTDSCLEGQFTNDDGTELVRLASRCLQYEPRER 300

Query: 301 PNPRSLVTALVTLQKDTEV 319
           PN +SLV AL+ LQKDTEV
Sbjct: 301 PNSKSLVAALIPLQKDTEV 319

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224058519|ref|XP_002299534.1| predicted protein [Populus trichocarpa] gi|222846792|gb|EEE84339.1| predicted protein [Populus trichocarpa]

 Score =  570 bits (1469), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 265/319 (83%), Positives = 292/319 (91%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MGCECSKL+ CC  S+Y  + PE  + + EE+  +D++P F EY+IETLR ATSGF++EN
Sbjct: 1   MGCECSKLTKCCWSSDYNGSVPEDHNEDKEERSELDDLPAFREYNIETLRMATSGFSVEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGEKAPNVVYKGKLENQ RI VKRFNRS+WPDARQFLEEAR VGQLRN RLANLLG
Sbjct: 61  IVSEHGEKAPNVVYKGKLENQRRIVVKRFNRSSWPDARQFLEEARTVGQLRNHRLANLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CCCEGDERLLV+E+MPNDTLAKHLFHWETQPMKWAMRLRVALH+A+ALEYC SK RALYH
Sbjct: 121 CCCEGDERLLVSEFMPNDTLAKHLFHWETQPMKWAMRLRVALHLAQALEYCASKGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYR+VFDD+ NPRLSCFGLMKNS DG+SYSTNLAFTPPEYLRTGRVT ESV+YSFGT
Sbjct: 181 DLNAYRVVFDDEGNPRLSCFGLMKNSIDGKSYSTNLAFTPPEYLRTGRVTAESVIYSFGT 240

Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
           LLLDLLSGKHIPPSHALDLIRDRNIQ L+DSCLEGQF++D+GTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLSDSCLEGQFANDDGTELVRLASRCLQYEPRER 300

Query: 301 PNPRSLVTALVTLQKDTEV 319
           PNP+SLV AL+ LQKDTEV
Sbjct: 301 PNPKSLVAALIPLQKDTEV 319

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426412|ref|XP_002270065.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297742525|emb|CBI34674.3| unnamed protein product [Vitis vinifera]

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 270/319 (84%), Positives = 288/319 (90%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MGC+CSK   CC  SE      E   VENEE    D++P F EY+I+ LR ATSGFA EN
Sbjct: 1   MGCQCSKFWVCCWDSEQKGLVVEPPSVENEENSEADDLPAFHEYTIDQLRMATSGFAAEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGEKAPNVVYKGKLENQ RIAVKRFN+SAWPDARQFLEEAR+VGQLRN RLANLLG
Sbjct: 61  IVSEHGEKAPNVVYKGKLENQRRIAVKRFNKSAWPDARQFLEEARSVGQLRNHRLANLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CC EGDERLLVAE+MPNDTLAKHLFHWETQPMKWAMRLRVAL++A+ALEYCTSK RALYH
Sbjct: 121 CCSEGDERLLVAEFMPNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSKGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYRIVFDDD +PRLSCFG+MKNSRDG+SYSTNLAFTPPEYLRTGRVTPESVMYSFGT
Sbjct: 181 DLNAYRIVFDDDGDPRLSCFGMMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240

Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
           LLLDLLSGKHIPPSHALDLIRDRNIQ LTDSCLEGQFSSD+GTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLTDSCLEGQFSSDDGTELVRLASRCLQYEPRER 300

Query: 301 PNPRSLVTALVTLQKDTEV 319
           PNP+SLV AL+ LQK+TEV
Sbjct: 301 PNPKSLVAALIPLQKETEV 319

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454188|ref|XP_002272416.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297745267|emb|CBI40347.3| unnamed protein product [Vitis vinifera]

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 266/319 (83%), Positives = 291/319 (91%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MGC+CSKL+ CC  S++  +  EA DV+N EK  VD +PVFCEY+ E L+ ATSGFA+EN
Sbjct: 1   MGCQCSKLAPCCWDSQFKGSVLEAPDVDNGEKSEVDYLPVFCEYTFEQLKNATSGFAVEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGEKAPNVVYKGKLENQ RIAVKRFNR AWPDARQF EEARAVGQLRN RLANLLG
Sbjct: 61  IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRVAWPDARQFSEEARAVGQLRNHRLANLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CCCE +ERLLVAEYMPN+TLAKHLFHWETQPMKWAMRLRV LH+A+ALEYCT + RALYH
Sbjct: 121 CCCEDNERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTGRGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYRI+FD+D NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRILFDEDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240

Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
           LLLDLLSGKHIPPSHALDLIRDRN+Q LTDSCLEGQF++D+GTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTNDDGTELVRLASRCLQYEPRER 300

Query: 301 PNPRSLVTALVTLQKDTEV 319
           PNP+SLV AL  LQK+TEV
Sbjct: 301 PNPKSLVAALTPLQKETEV 319

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297805526|ref|XP_002870647.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297316483|gb|EFH46906.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  553 bits (1425), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 257/320 (80%), Positives = 290/320 (90%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MGCE SKLSA C  SE G + P+   ++ E +   +++P F E+SIET+R ATSGFA EN
Sbjct: 1   MGCEVSKLSALCCVSESGRSNPDVTGLDEEGRGESNDLPQFREFSIETIRNATSGFAAEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGE+APNVVYKGKLENQ RIAVKRFNR +WPD+RQFLEEA+AVGQLRN R+ANLLG
Sbjct: 61  IVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CC EG+ERLL+AE+MPN+TLAKHLFHWE+QPMKWAMRLRVALHIA+ALEYCTSK RALYH
Sbjct: 121 CCYEGEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYR++FDDD NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240

Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
           LLLDLLSGKHIPPSHALDLIRDRNIQ L DS LEGQFSSD+GTEL+RLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRER 300

Query: 301 PNPRSLVTALVTLQKDTEVS 320
           PNP+SLV+A++ LQKD E++
Sbjct: 301 PNPKSLVSAMIPLQKDLEIA 320

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520418|ref|XP_003528859.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max]

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 259/319 (81%), Positives = 285/319 (89%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MG +CS+L  CC  S+   +  E  D E E+   V N P F EY++E L+ ATSGFA+EN
Sbjct: 1   MGIQCSRLIPCCVDSQVKASVIETPDAEIEDSSEVSNWPTFREYTLEQLKNATSGFAVEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGEKAPNVVYKGKLENQ RIAVKRFNR+AWPDARQFLEEAR+VGQLRN+RLANLLG
Sbjct: 61  IVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDARQFLEEARSVGQLRNQRLANLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CCCEG+ERLLVAEYMPN+TLAKHLFHWETQPMKWAMRLRV LH+A+ALEYCTSK RALYH
Sbjct: 121 CCCEGEERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYR++FD+D NPRLS FGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240

Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
           LLLDLLSGKHIPPSHALD+IR RN+Q LTDSCLEGQFS D+GTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDVIRGRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRER 300

Query: 301 PNPRSLVTALVTLQKDTEV 319
           PNP+SLV AL  LQK+TEV
Sbjct: 301 PNPKSLVVALAPLQKETEV 319

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15237604|ref|NP_198942.1| putative serine/threonine-protein kinase [Arabidopsis thaliana] gi|75333858|sp|Q9FHD7.1|Y5126_ARATH RecName: Full=Probable serine/threonine-protein kinase At5g41260 gi|10177770|dbj|BAB11102.1| protein kinase-like [Arabidopsis thaliana] gi|115311489|gb|ABI93925.1| At5g41260 [Arabidopsis thaliana] gi|332007275|gb|AED94658.1| putative serine/threonine-protein kinase [Arabidopsis thaliana]

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 256/320 (80%), Positives = 289/320 (90%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MGCE SKLSA C  SE G + P+   ++ E +   +++P F E+SIET+R ATSGFA EN
Sbjct: 1   MGCEVSKLSALCCVSESGRSNPDVTGLDEEGRGESNDLPQFREFSIETIRNATSGFAAEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGE+APNVVYKGKLENQ RIAVKRFNR +WPD+RQFLEEA+AVGQLRN R+ANLLG
Sbjct: 61  IVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CC E +ERLL+AE+MPN+TLAKHLFHWE+QPMKWAMRLRVALHIA+ALEYCTSK RALYH
Sbjct: 121 CCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYR++FDDD NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240

Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
           LLLDLLSGKHIPPSHALDLIRDRNIQ L DS LEGQFSSD+GTEL+RLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRER 300

Query: 301 PNPRSLVTALVTLQKDTEVS 320
           PNP+SLV+A++ LQKD E++
Sbjct: 301 PNPKSLVSAMIPLQKDLEIA 320

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357520451|ref|XP_003630514.1| Protein kinase-like protein [Medicago truncatula] gi|355524536|gb|AET04990.1| Protein kinase-like protein [Medicago truncatula]

 Score =  550 bits (1416), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 264/321 (82%), Positives = 286/321 (89%), Gaps = 2/321 (0%)

Query: 1   MGCECSKLSACCSGSEYGEA-APEAQDVENEEKPGVDN-VPVFCEYSIETLRTATSGFAM 58
           MGC  SK S CC  +E G    PEA   ENE+     N +  F EY+I+ LR ATSGFA+
Sbjct: 7   MGCNFSKYSTCCCSTEQGGVQVPEANIEENEDNNVEGNGLASFREYTIDQLRKATSGFAI 66

Query: 59  ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANL 118
           ENIVSEHGEKAPNVVYKGKLENQ RIAVKRFN+S WPDA QFLEEARAVGQLR++RLANL
Sbjct: 67  ENIVSEHGEKAPNVVYKGKLENQVRIAVKRFNKSNWPDAHQFLEEARAVGQLRSQRLANL 126

Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 178
           LGCCCEGDERLLV+EYM NDTLAKHLFHWETQPMKWAMRLRVAL++A+ALEYCTSK RAL
Sbjct: 127 LGCCCEGDERLLVSEYMSNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSKGRAL 186

Query: 179 YHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSF 238
           YHDLNAYR++FDDD NP+LSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV YSF
Sbjct: 187 YHDLNAYRVLFDDDFNPKLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSF 246

Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298
           GTLLLDLLSGKHIPPSHALDLIRDRN+Q+LTDSCLEGQFS DEGTELVRLASRCLQ EPR
Sbjct: 247 GTLLLDLLSGKHIPPSHALDLIRDRNLQSLTDSCLEGQFSDDEGTELVRLASRCLQSEPR 306

Query: 299 ERPNPRSLVTALVTLQKDTEV 319
           ERPNP+SLVTAL+ LQKD+EV
Sbjct: 307 ERPNPKSLVTALIPLQKDSEV 327

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452322|ref|XP_004143908.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cucumis sativus] gi|449495800|ref|XP_004159948.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cucumis sativus]

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 265/319 (83%), Positives = 287/319 (89%), Gaps = 2/319 (0%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MGCECSK S C  GSE  +      D E+  K   D +P F E++I+ LRTATSGFA+EN
Sbjct: 1   MGCECSKFSDCF-GSEETKPVARVPDNESIGKSEFD-LPAFREFTIDQLRTATSGFAVEN 58

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGEKAPNVVYKGKL+NQ RIAVKRFNRSAWPDARQFL+EARAVGQLRN+RLANLLG
Sbjct: 59  IVSEHGEKAPNVVYKGKLDNQRRIAVKRFNRSAWPDARQFLDEARAVGQLRNQRLANLLG 118

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CC EG+ERLLVAE+MPN+TLAKHLFHWE QPMKW+MRLRVALH+A+ALEYCTSK RALYH
Sbjct: 119 CCFEGEERLLVAEFMPNETLAKHLFHWENQPMKWSMRLRVALHLAQALEYCTSKGRALYH 178

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYRIVFDD+ NPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTG +TPESV+YSFGT
Sbjct: 179 DLNAYRIVFDDEGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGGITPESVIYSFGT 238

Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
           LLLDLLSGKHIPPSHALDLIRDRNIQ LTDSCLEGQFS+DEGTELVRLASRCLQYEPRER
Sbjct: 239 LLLDLLSGKHIPPSHALDLIRDRNIQMLTDSCLEGQFSNDEGTELVRLASRCLQYEPRER 298

Query: 301 PNPRSLVTALVTLQKDTEV 319
           PN +SLVTAL+ LQKD EV
Sbjct: 299 PNTKSLVTALIPLQKDLEV 317

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504529|ref|XP_003521048.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max]

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 256/319 (80%), Positives = 284/319 (89%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MG +CS+L  CC  S+   +  E  D E E+     N P F E+++E L+ ATSGFA+EN
Sbjct: 1   MGIQCSRLIPCCVDSQVKASVIETPDAEIEDSSEASNWPTFREFTLEQLKNATSGFAVEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGEKAPNVVYKGKLENQ RIAVKRFNR+AWPDARQFLEE+R+VGQLRN+RLANLLG
Sbjct: 61  IVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDARQFLEESRSVGQLRNQRLANLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CCCEG+ERLLVAEYMPN+TLAKHLFHWETQPMKWAMRLRV LH+A+ALEYCTSK RALYH
Sbjct: 121 CCCEGEERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYR++FD+D NPRLS FGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240

Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
           LLLDLLSGKHIPPSHALD+IR RN+Q LTDSCLEGQFS D+GTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDVIRGRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRER 300

Query: 301 PNPRSLVTALVTLQKDTEV 319
           PNP+SLV AL  LQK+TEV
Sbjct: 301 PNPKSLVAALAPLQKETEV 319

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	359
TAIR|locus:2155115	487	BSK8 "brassinosteroid-signalin	0.891	0.657	0.8	2.4e-140
TAIR|locus:2031279	487	BSK7 "brassinosteroid-signalin	0.883	0.650	0.815	5.6e-139
TAIR|locus:2127118	489	BSK3 "brassinosteroid-signalin	0.885	0.650	0.783	2.5e-136
TAIR|locus:2198160	483	BSK4 "brassinosteroid-signalin	0.880	0.654	0.746	1.7e-128
TAIR|locus:2154538	489	BSK5 "brassinosteroid-signalin	0.877	0.644	0.730	2.6e-125
TAIR|locus:2084475	490	BSK6 "brassinosteroid-signalin	0.888	0.651	0.697	7.4e-121
TAIR|locus:2122058	512	BSK1 "brassinosteroid-signalin	0.807	0.566	0.675	1.3e-107
TAIR|locus:2142315	489	BSK2 "brassinosteroid-signalin	0.880	0.646	0.604	3.7e-103
TAIR|locus:2083499	477	BSK9 "brassinosteroid-signalin	0.813	0.612	0.640	1.7e-100
TAIR|locus:2150074	499	BSK10 "brassinosteroid-signali	0.874	0.629	0.593	4.1e-97

TAIR|locus:2155115 BSK8 "brassinosteroid-signaling kinase 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 1373 (488.4 bits), Expect = 2.4e-140, P = 2.4e-140
 Identities = 256/320 (80%), Positives = 289/320 (90%)

Query:     1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
             MGCE SKLSA C  SE G + P+   ++ E +   +++P F E+SIET+R ATSGFA EN
Sbjct:     1 MGCEVSKLSALCCVSESGRSNPDVTGLDEEGRGESNDLPQFREFSIETIRNATSGFAAEN 60

Query:    61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
             IVSEHGE+APNVVYKGKLENQ RIAVKRFNR +WPD+RQFLEEA+AVGQLRN R+ANLLG
Sbjct:    61 IVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLG 120

Query:   121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
             CC E +ERLL+AE+MPN+TLAKHLFHWE+QPMKWAMRLRVALHIA+ALEYCTSK RALYH
Sbjct:   121 CCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYH 180

Query:   181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
             DLNAYR++FDDD NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct:   181 DLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240

Query:   241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
             LLLDLLSGKHIPPSHALDLIRDRNIQ L DS LEGQFSSD+GTEL+RLASRCLQYEPRER
Sbjct:   241 LLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRER 300

Query:   301 PNPRSLVTALVTLQKDTEVS 320
             PNP+SLV+A++ LQKD E++
Sbjct:   301 PNPKSLVSAMIPLQKDLEIA 320

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

TAIR|locus:2031279 BSK7 "brassinosteroid-signaling kinase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 1360 (483.8 bits), Expect = 5.6e-139, P = 5.6e-139
 Identities = 260/319 (81%), Positives = 285/319 (89%)

Query:     1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDN-VPVFCEYSIETLRTATSGFAME 59
             MGCE SKL A C  S+  E +       +E++ G  N +P F E+SIETLR ATSGFA E
Sbjct:     1 MGCEVSKLCAFCCVSD-PEGSNHGVTGLDEDRRGEGNDLPQFREFSIETLRNATSGFATE 59

Query:    60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             NIVSEHGEKAPNVVYKGKL+NQ RIAVKRFNR AWPD+RQFLEEA+AVGQLRN R+ANLL
Sbjct:    60 NIVSEHGEKAPNVVYKGKLDNQRRIAVKRFNRKAWPDSRQFLEEAKAVGQLRNYRMANLL 119

Query:   120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
             GCC EG+ERLLVAE+MPN+TLAKHLFHWE+QPMKWAMRLRVALHIA+ALEYCT K RALY
Sbjct:   120 GCCYEGEERLLVAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTGKGRALY 179

Query:   180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG 239
             HDLNAYR++FDDD NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESVMYS+G
Sbjct:   180 HDLNAYRVLFDDDSNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYSYG 239

Query:   240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
             TLLLDLLSGKHIPPSHALDLIRDRNIQ L DSCLEGQFSSD+GTEL+RLASRCLQYEPRE
Sbjct:   240 TLLLDLLSGKHIPPSHALDLIRDRNIQMLIDSCLEGQFSSDDGTELIRLASRCLQYEPRE 299

Query:   300 RPNPRSLVTALVTLQKDTE 318
             RPNP+SLVTA++ LQKD E
Sbjct:   300 RPNPKSLVTAMIPLQKDLE 318

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2127118 BSK3 "brassinosteroid-signaling kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1335 (475.0 bits), Expect = 2.5e-136, P = 2.5e-136
 Identities = 250/319 (78%), Positives = 282/319 (88%)

Query:     1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
             MG +CS LS CC  + +  A  EA DV+N E   + +VP F EY++E L+ ATSGFA+E 
Sbjct:     1 MGGQCSSLS-CCRNTSHKTAVLEAPDVDNGESSEITDVPNFREYTLEQLKAATSGFAVEY 59

Query:    61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
             IVSEHGEKAPNVVYKGKLENQ +IAVKRF R AWPD+RQFLEEAR+VGQLR+ R+ANLLG
Sbjct:    60 IVSEHGEKAPNVVYKGKLENQKKIAVKRFTRMAWPDSRQFLEEARSVGQLRSERMANLLG 119

Query:   121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
             CCCEGDERLLVAE+MPN+TLAKHLFHWETQPMKW MRLRV L++A+ALEYCTSK R LYH
Sbjct:   120 CCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTMRLRVVLYLAQALEYCTSKGRTLYH 179

Query:   181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
             DLNAYR++FD++ NPRLS FGLMKNSRDG+SYSTNLAFTPPEYLRTGR+TPESV+YSFGT
Sbjct:   180 DLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIYSFGT 239

Query:   241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
             LLLDLLSGKHIPPSHALDLIRDRN+QTLTDSCL+GQFS  +GTELVRLASRCLQYE RER
Sbjct:   240 LLLDLLSGKHIPPSHALDLIRDRNLQTLTDSCLDGQFSDSDGTELVRLASRCLQYEARER 299

Query:   301 PNPRSLVTALVTLQKDTEV 319
             PN +SLVTAL  LQK+TEV
Sbjct:   300 PNTKSLVTALTPLQKETEV 318

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016020 "membrane" evidence=IDA

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2198160 BSK4 "brassinosteroid-signaling kinase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 1261 (449.0 bits), Expect = 1.7e-128, P = 1.7e-128
 Identities = 238/319 (74%), Positives = 276/319 (86%)

Query:     1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
             MG + SK+  CCS   +   A EA DVEN+E   V+ V  F EYS+E L+ ATS FA+EN
Sbjct:     1 MGGQSSKIGTCCS---HKTTALEAPDVENKENGEVNGVHSFREYSLEQLKIATSCFALEN 57

Query:    61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
             +VSEHGE APNVVY+GKLEN  +IA+KRF+ +AWPD RQFLEEAR VGQLR++R+ANLLG
Sbjct:    58 VVSEHGETAPNVVYQGKLENHMKIAIKRFSGTAWPDPRQFLEEARLVGQLRSKRMANLLG 117

Query:   121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
              CCEG ERLLVAE+MPN+TLAKHLFHW+T+PMKWAMRLRVAL+I+EALEYC++    LYH
Sbjct:   118 YCCEGGERLLVAEFMPNETLAKHLFHWDTEPMKWAMRLRVALYISEALEYCSNNGHTLYH 177

Query:   181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
             DLNAYR++FD++ NPRLS FGLMKNSRDG+SYSTNLAFTPPEYLRTGR+T ESV+YSFGT
Sbjct:   178 DLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITAESVIYSFGT 237

Query:   241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
             LLLDLL+GKHIPPSHALDLIRDRN+QTLTDSCLEGQFS  +GTELVRL S CLQYE RER
Sbjct:   238 LLLDLLTGKHIPPSHALDLIRDRNLQTLTDSCLEGQFSDSDGTELVRLTSCCLQYEARER 297

Query:   301 PNPRSLVTALVTLQKDTEV 319
             PN +SLVTAL++LQKDTEV
Sbjct:   298 PNIKSLVTALISLQKDTEV 316

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2154538 BSK5 "brassinosteroid-signaling kinase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1231 (438.4 bits), Expect = 2.6e-125, P = 2.6e-125
 Identities = 233/319 (73%), Positives = 271/319 (84%)

Query:     1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
             MG  CSKLS C   +       EA D++N    G D++P F E+S + LR AT GF+ ++
Sbjct:     1 MGPRCSKLSLCWWPTHLKSTHNEASDLDN----GTDDLPSFTEFSFDQLRAATCGFSTDS 56

Query:    61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
             IVSEHG KAPNVVYKG+LE+   IAVKRFNRSAWPD RQFLEEA+AVGQLRN RLANL+G
Sbjct:    57 IVSEHGVKAPNVVYKGRLEDDRWIAVKRFNRSAWPDTRQFLEEAKAVGQLRNERLANLIG 116

Query:   121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
              CCEGDERLLVAE+MP +TL+KHLFHW++QPMKW+MRLRVAL++A+ALEYC+SK RALYH
Sbjct:   117 FCCEGDERLLVAEFMPFETLSKHLFHWDSQPMKWSMRLRVALYLAQALEYCSSKGRALYH 176

Query:   181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
             DLNAYRI+FD D NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRV PESV+YSFGT
Sbjct:   177 DLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGT 236

Query:   241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
             LLLDLLSGKHIPPSHALDLIR +N   L DSCL+G FS+D+GT+LVRLASRCLQYE RER
Sbjct:   237 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLDGHFSNDDGTDLVRLASRCLQYEARER 296

Query:   301 PNPRSLVTALVTLQKDTEV 319
             PN +SLV++L  LQK+T++
Sbjct:   297 PNVKSLVSSLAPLQKETDI 315

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2084475 BSK6 "brassinosteroid-signaling kinase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 1189 (423.6 bits), Expect = 7.4e-121, P = 7.4e-121
 Identities = 226/324 (69%), Positives = 272/324 (83%)

Query:     1 MGCECSKLSACCSGSEYGEAAP-EAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAME 59
             MG  CSK S C   S +  A+  E+ D+EN  K      P F E+ +E L++AT GF+ +
Sbjct:     1 MGARCSKFSFCLFPSHFKSASVLESPDIENGGKVW----PTFKEFKLEQLKSATGGFSSD 56

Query:    60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             NIVSEHGEKAPNVVY+G+L++   IAVKRFNR AW D RQFL+EA+AVG LR+ RLANL+
Sbjct:    57 NIVSEHGEKAPNVVYRGRLDDGRLIAVKRFNRLAWADHRQFLDEAKAVGSLRSDRLANLI 116

Query:   120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
             GCC EG+ERLLVAE+MP++TLAKHLFHWE  PMKWAMRLRVAL +A+ALEYC++K RALY
Sbjct:   117 GCCFEGEERLLVAEFMPHETLAKHLFHWENNPMKWAMRLRVALCLAQALEYCSNKGRALY 176

Query:   180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG 239
             HDLNAYR++FD D NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV++SFG
Sbjct:   177 HDLNAYRVLFDKDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVFSFG 236

Query:   240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
             T+LLDL+SGKHIPPSHALDLIR +N   L DS LEG FS+++GTELVRLA+RCLQYE RE
Sbjct:   237 TVLLDLMSGKHIPPSHALDLIRGKNCAMLMDSALEGHFSNEDGTELVRLATRCLQYEARE 296

Query:   300 RPNPRSLVTALVTLQKDTEVSCFL 323
             RPN +SLVT+LVTLQK+++V+ ++
Sbjct:   297 RPNVKSLVTSLVTLQKESDVASYV 320

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2122058 BSK1 "brassinosteroid-signaling kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
 Identities = 196/290 (67%), Positives = 241/290 (83%)

Query:    34 GVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA 93
             G   +P F E+S   L+ AT+ F+ +NIVSE GEKAPN+VYKG+L+N+  IAVK+F + A
Sbjct:    51 GGGGIPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMA 110

Query:    94 WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMK 153
             WP+ +QF EEA  VG+LR+ RLANL+G CC+GDERLLVAE+MPNDTLAKHLFHWE Q ++
Sbjct:   111 WPEPKQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIE 170

Query:   154 WAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS 213
             WAMRLRV  +IAEAL+YC+++ R LYHDLNAYR++FD+D +PRLSCFGLMKNSRDG+SYS
Sbjct:   171 WAMRLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYS 230

Query:   214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL 273
             TNLA+TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR +NI  L DS L
Sbjct:   231 TNLAYTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHL 290

Query:   274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVSCFL 323
             EG+FS++E T +V LAS+CLQYEPRERPN + LV  L  LQ  ++V  ++
Sbjct:   291 EGKFSTEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYV 340

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

TAIR|locus:2142315 BSK2 "brassinosteroid-signaling kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
 Identities = 194/321 (60%), Positives = 252/321 (78%)

Query:     1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDN-VPVFCEYSIETLRTATSGFAME 59
             MGC  SK +   S  +   +AP   +  N ++  VD  +  F E+ +  LR AT+GF+  
Sbjct:     1 MGCLHSKTANLPSSDD--PSAPNKPESVNGDQ--VDQEIQNFKEFELNELRKATNGFSPS 56

Query:    60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
              IVSE GEKAPNVVY+GKLE    +A+KRF+R +WPDA+QF+ EA  VG+LRN+R+ +L+
Sbjct:    57 CIVSEGGEKAPNVVYRGKLEGNHLVAIKRFSRQSWPDAQQFVVEATGVGKLRNKRIVSLI 116

Query:   120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
             GCC EGDERLLVAEYMPNDTL+KHLFHWE QP+ W MR+R+A +IAEAL+YC  + R +Y
Sbjct:   117 GCCAEGDERLLVAEYMPNDTLSKHLFHWEKQPLPWDMRVRIADYIAEALDYCNIENRKIY 176

Query:   180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG 239
             HDLNAYRI+FD++ +PRLS FGLMKNSRDG+SYSTNLA+TPPE+LRTGRV PESV++S+G
Sbjct:   177 HDLNAYRILFDEEGDPRLSTFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIFSYG 236

Query:   240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
             T+LLDLLSGKHIPPSHALD+IR +N   L DS LEGQ+++D+ T+LV LAS+CLQ E ++
Sbjct:   237 TILLDLLSGKHIPPSHALDIIRGKNALLLMDSSLEGQYANDDATKLVDLASKCLQSEAKD 296

Query:   300 RPNPRSLVTALVTLQKDTEVS 320
             RP+ + L++A+  LQK  EV+
Sbjct:   297 RPDTKFLLSAVAPLQKQEEVA 317

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IDA

TAIR|locus:2083499 BSK9 "brassinosteroid-signaling kinase 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 997 (356.0 bits), Expect = 1.7e-100, P = 1.7e-100
 Identities = 187/292 (64%), Positives = 229/292 (78%)

Query:    28 ENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVK 87
             +N+E+      P F E+S+E LR AT GF+ +NIVSEH E+ PN+VYKG+L +  +IAVK
Sbjct:    13 DNKEEDEGSTCPNFLEFSLEQLRVATDGFSADNIVSEHNERVPNIVYKGQLNDGRKIAVK 72

Query:    88 RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW 147
             RF R +WPD+ +F+EEA+AVG+ R+  +ANL+GCC EG ERLLVAEYMPN+TLAKHLFHW
Sbjct:    73 RFQRLSWPDSLEFIEEAQAVGRCRSEHMANLIGCCSEGHERLLVAEYMPNETLAKHLFHW 132

Query:   148 ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207
             E +PMKW MRLRVALH A ALEYC      LYHDLN YRI+FD   NPRLSCFGLMK SR
Sbjct:   133 EKRPMKWEMRLRVALHTATALEYCNDWGIDLYHDLNTYRILFDKVGNPRLSCFGLMKCSR 192

Query:   208 DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT 267
             +G+SYSTNLAF PPEYLR G V PESV +SFGTLLLDL+SG+HIPP+HALDL R +N   
Sbjct:   193 EGKSYSTNLAFAPPEYLRLGTVIPESVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNYLV 252

Query:   268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
             L DS L+GQFS ++ TEL+ LASRCL+ EP ERP+ + L++AL  L+K  E+
Sbjct:   253 LMDSALDGQFSDEDRTELIHLASRCLRPEPDERPSIKFLMSALSRLEKRAEL 304

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2150074 BSK10 "brassinosteroid-signaling kinase 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 965 (344.8 bits), Expect = 4.1e-97, P = 4.1e-97
 Identities = 190/320 (59%), Positives = 230/320 (71%)

Query:     1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDN----VP-VFCEYSIETLRTATSG 55
             MGC C K S   S S     +    D+EN  +   D+     P +F E+S+E LR AT G
Sbjct:     1 MGCICFK-SWRRSSSSPSITSTVIDDLENVREYDADDDGGHYPLIFREFSLEQLRIATDG 59

Query:    56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL 115
             F+  NIVSEH +  PN+VYKGKL +  RIAVKRF R +WPD  +F+ EA+AVG+LR+  +
Sbjct:    60 FSAGNIVSEHNDSVPNIVYKGKLGDGRRIAVKRFQRLSWPDPFEFINEAQAVGRLRSEHM 119

Query:   116 ANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
             ANL+GCCC+ +ERLLVAEYMPN TLAKHLFHWE +PMKW MRL+VALH A ALEYC  K 
Sbjct:   120 ANLIGCCCDDNERLLVAEYMPNGTLAKHLFHWEKRPMKWEMRLKVALHTARALEYCNDKG 179

Query:   176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVM 235
               LYHDLN YRI+FD    P+LSCFGLMKNS +G+ YSTNLAF PPEYLR G V  ESV 
Sbjct:   180 IDLYHDLNPYRIMFDKTGIPKLSCFGLMKNSHEGKIYSTNLAFAPPEYLRLGTVIAESVT 239

Query:   236 YSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295
             +SFGTLLLDL+SG+HIPP+HALDL R +N   L DS L+GQFS ++ TEL+ +ASRC + 
Sbjct:   240 FSFGTLLLDLMSGRHIPPNHALDLFRGKNYLVLMDSALDGQFSDEDRTELIHVASRCFKT 299

Query:   296 EPRERPNPRSLVTALVTLQK 315
             EP ERP+ + L   L  LQK
Sbjct:   300 EPEERPSIKFLKATLSRLQK 319

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FHD7	Y5126_ARATH	2, ., 7, ., 1, 1, ., 1	0.8	0.8913	0.6570	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	359
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-26
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-23
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-22
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-21
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	5e-21
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	8e-19
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-18
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-17
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	8e-16
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-15
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	3e-14
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	3e-14
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	2e-13
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	6e-13
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	1e-12
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	2e-12
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	2e-12
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	3e-12
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	3e-12
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	7e-12
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	7e-12
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	7e-12
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	1e-11
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	2e-11
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	6e-11
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	6e-11
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	7e-11
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	8e-11
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-10
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	2e-10
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	2e-10
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	2e-10
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	4e-10
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	5e-10
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-09
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	2e-09
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	4e-09
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	4e-09
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	5e-09
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	5e-09
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	8e-09
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-08
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	3e-08
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	3e-08
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	4e-08
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	1e-07
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	1e-07
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	2e-07
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	2e-07
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	2e-07
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	2e-07
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	4e-07
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	5e-07
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	7e-07
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	9e-07
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	1e-06
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	1e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-06
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	3e-06
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	3e-06
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	3e-06
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	4e-06
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	7e-06
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	7e-06
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	8e-06
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	3e-05
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	3e-05
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	4e-05
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	5e-05
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	6e-05
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	8e-05
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	8e-05
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	9e-05
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	1e-04
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	1e-04
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	1e-04
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-04
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	2e-04
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-04
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-04
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	4e-04
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	4e-04
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	5e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	7e-04
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	7e-04
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	7e-04
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	9e-04
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	0.001
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	0.001
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	0.001
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	0.001
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	0.001
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	0.001
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	0.001
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	0.002
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	0.002
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	0.003

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  104 bits (261), Expect = 2e-26
 Identities = 55/245 (22%), Positives = 91/245 (37%), Gaps = 49/245 (20%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERL 129
            VY  +  +   ++A+K   +       +  L E   + +L +  +  L G   + +   
Sbjct: 8   TVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLY 67

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRI- 187
           LV EY    +L   L   E   +     LR+ L I E LEY  S    + H DL    I 
Sbjct: 68  LVMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENIL 124

Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYST----NLAFTPPEYLR-TGRVTPESVMYSFGTLL 242
           +  D+   +L+ FGL K     +S         A+  PE L   G  + +S ++S G +L
Sbjct: 125 LDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL 184

Query: 243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
            +L            DLIR                             + LQ +P +RP+
Sbjct: 185 YEL--------PELKDLIR-----------------------------KMLQKDPEKRPS 207

Query: 303 PRSLV 307
            + ++
Sbjct: 208 AKEIL 212

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 97.6 bits (244), Expect = 1e-23
 Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 36/260 (13%)

Query: 72  VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
            VYKG L       +  +AVK     A     + FL EAR + +L +  +  LLG C E 
Sbjct: 14  EVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE 73

Query: 126 DERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH- 180
           +  ++V EYMP     D L K+      + +  +  L  AL IA  +EY  SK     H 
Sbjct: 74  EPLMIVMEYMPGGDLLDYLRKN----RPKELSLSDLLSFALQIARGMEYLESKN--FIHR 127

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVM 235
           DL A   +  +++  ++S FGL ++  D   Y          +  PE L+ G+ T +S +
Sbjct: 128 DLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDV 187

Query: 236 YSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290
           +SFG LL ++ + G+     +  +  L+ ++         +C           EL +L  
Sbjct: 188 WSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPNCPP---------ELYKLML 238

Query: 291 RCLQYEPRERPNPRSLVTAL 310
           +C   +P +RP    LV  L
Sbjct: 239 QCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 94.1 bits (235), Expect = 2e-22
 Identities = 70/260 (26%), Positives = 111/260 (42%), Gaps = 37/260 (14%)

Query: 72  VVYKGKLE-----NQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
            VYKGKL+      +  +AVK     A     + FL EAR + +L +  +  LLG C E 
Sbjct: 14  EVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLGVCTEE 73

Query: 126 DERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH- 180
           +   +V EYM        L K+        +  +  L  AL IA  +EY  SK     H 
Sbjct: 74  EPLYIVMEYMEGGDLLSYLRKN-----RPKLSLSDLLSFALQIARGMEYLESKN--FIHR 126

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVM 235
           DL A   +  +++  ++S FGL ++  D   Y          +  PE L+ G+ T +S +
Sbjct: 127 DLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKSDV 186

Query: 236 YSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290
           +SFG LL ++ + G+     +     L+ +++        +C           EL  L  
Sbjct: 187 WSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPPNCPP---------ELYDLML 237

Query: 291 RCLQYEPRERPNPRSLVTAL 310
           +C   +P +RP    LV  L
Sbjct: 238 QCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 91.8 bits (229), Expect = 2e-21
 Identities = 74/262 (28%), Positives = 113/262 (43%), Gaps = 33/262 (12%)

Query: 72  VVYKGKL----ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGD 126
            VYKGKL         +AVK     A  + R  FL+EAR + +L +  +  LLG C E +
Sbjct: 10  EVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEE 69

Query: 127 ERLLVAEYMPNDTLAKHL-------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
              LV EYM    L  +L          E   +     L  A+ IA+ +EY  SK + ++
Sbjct: 70  PLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVH 128

Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPES 233
            DL A   +  +D+  ++S FGL ++  D   Y         + +  PE L+ G  T +S
Sbjct: 129 RDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKS 188

Query: 234 VMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288
            ++SFG LL ++ + G      +     L+ +R        + C +         EL  L
Sbjct: 189 DVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPD---------ELYEL 239

Query: 289 ASRCLQYEPRERPNPRSLVTAL 310
              C Q +P +RP    LV  L
Sbjct: 240 MLSCWQLDPEDRPTFSELVERL 261

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 90.6 bits (226), Expect = 5e-21
 Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 30/257 (11%)

Query: 72  VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
            VYKG L       + ++AVK     A  + R+ FLEEA  + +L +  +  LLG C +G
Sbjct: 14  EVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQG 73

Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 184
           +   +V EYMP   L   L     + +     L++AL IA+ +EY  SK     H DL A
Sbjct: 74  EPLYIVTEYMPGGDLLDFL-RKHGEKLTLKDLLQMALQIAKGMEYLESKN--FVHRDLAA 130

Query: 185 YRIVFDDDVNPRLSCFGLMKN-SRDGRSYSTNLAFTP-----PEYLRTGRVTPESVMYSF 238
              +  +++  ++S FGL ++   D           P     PE L+ G+ T +S ++SF
Sbjct: 131 RNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSF 190

Query: 239 GTLLLDLLSG-----KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
           G LL ++ +        +     L+L+ D       ++C +         EL  L  +C 
Sbjct: 191 GVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPRPENCPD---------ELYELMLQCW 241

Query: 294 QYEPRERPNPRSLVTAL 310
            Y+P +RP    LV  L
Sbjct: 242 AYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 84.4 bits (209), Expect = 8e-19
 Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 4/181 (2%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V  G    Q ++AVK     +   A+ FL EA  +  LR+  L  LLG   +G+   +V 
Sbjct: 22  VMLGDYRGQ-KVAVKCLKDDS-TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           EYM   +L  +L       +  A +L  AL + E +EY   K   ++ DL A  ++  +D
Sbjct: 80  EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSED 138

Query: 193 VNPRLSCFGLMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI 251
           +  ++S FGL K +  G+      + +T PE LR  + + +S ++SFG LL ++ S   +
Sbjct: 139 LVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198

Query: 252 P 252
           P
Sbjct: 199 P 199

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 84.2 bits (209), Expect = 1e-18
 Identities = 62/247 (25%), Positives = 96/247 (38%), Gaps = 16/247 (6%)

Query: 72  VVYKGKLEN-QFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
            VYK K +     +AVK   +        +    E R + +L +  +  L+    + D  
Sbjct: 14  TVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDHL 73

Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRI 187
            LV EY     L  +L      P+      ++AL I   LEY  S    + H DL    I
Sbjct: 74  YLVMEYCEGGDLFDYLS--RGGPLSEDEAKKIALQILRGLEYLHS--NGIIHRDLKPENI 129

Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGR-VTPESVMYSFGTLL 242
           + D++   +++ FGL K      S  T    TP    PE L  G    P+  ++S G +L
Sbjct: 130 LLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVIL 189

Query: 243 LDLLSGKHIPPSHALD--LIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
            +LL+GK       +   L   R I        +    S    E   L  +CL  +P +R
Sbjct: 190 YELLTGKPPFSGENILDQLQLIRRILG-PPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKR 248

Query: 301 PNPRSLV 307
           P    ++
Sbjct: 249 PTAEEIL 255

Length = 260

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 80.2 bits (198), Expect = 2e-17
 Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 19/239 (7%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VYKG L+    +AVK    +  PD ++ FL+EA  + Q  +  +  L+G C +     +V
Sbjct: 11  VYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIV 70

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E +P  +L   L   + + +     L+++L  A  +EY  SK   ++ DL A   +  +
Sbjct: 71  MELVPGGSLLTFLRKKKNR-LTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGE 128

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           +   ++S FG M    +G  Y+ +       + +T PE L  GR T ES ++S+G LL +
Sbjct: 129 NNVLKISDFG-MSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWE 187

Query: 245 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--ELVRLASRCLQYEPRERP 301
             S    P           N QT        +  + +    E+ RL  +C  Y+P  RP
Sbjct: 188 TFSLGDTPYPGM------SNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRP 240

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 76.0 bits (188), Expect = 8e-16
 Identities = 51/252 (20%), Positives = 84/252 (33%), Gaps = 34/252 (13%)

Query: 72  VVYKGK-LENQFRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
            VY  +  +    +A+K   +     D  + L E + + +L++  +  L     + D+  
Sbjct: 14  KVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLY 73

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN-AYR-- 186
           LV EY     L   L          A        I  ALEY         H     +R  
Sbjct: 74  LVMEYCEGGDLFDLLKKRGRLSEDEA--RFYLRQILSALEYL--------HSKGIVHRDL 123

Query: 187 ----IVFDDDVNPRLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRVTPESVMYSFG 239
               I+ D+D + +L+ FGL +    G   +T      +  PE L          ++S G
Sbjct: 124 KPENILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLG 183

Query: 240 TLLLDLLSGK-----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294
            +L +LL+GK               I                  S E  +L+R   + L 
Sbjct: 184 VILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWD----ISPEAKDLIR---KLLV 236

Query: 295 YEPRERPNPRSL 306
            +P +R      
Sbjct: 237 KDPEKRLTAEEA 248

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 75.0 bits (184), Expect = 2e-15
 Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 20/251 (7%)

Query: 66  GEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG 125
           GE     V +G+   Q ++AVK  N      A+ FLEE   + +L ++ L  LLG     
Sbjct: 15  GEGEFGAVLQGEYTGQ-KVAVK--NIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILH- 70

Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
           +   +V E M    L   L       +     L+ +L +AE +EY  SK + ++ DL A 
Sbjct: 71  NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK-KLVHRDLAAR 129

Query: 186 RIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
            I+  +D   ++S FGL +  S    +    + +T PE L+  + + +S ++S+G LL +
Sbjct: 130 NILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWE 189

Query: 245 LLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRE 299
           + S G+   P  +L  +++         C+E  +  +  EG   ++  L + C + EP++
Sbjct: 190 VFSYGRAPYPKMSLKEVKE---------CVEKGYRMEPPEGCPADVYVLMTSCWETEPKK 240

Query: 300 RPNPRSLVTAL 310
           RP+   L   L
Sbjct: 241 RPSFHKLREKL 251

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 74.1 bits (182), Expect = 3e-14
 Identities = 74/305 (24%), Positives = 130/305 (42%), Gaps = 44/305 (14%)

Query: 48  TLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARA 106
           T+    S    EN++S   + A    YKGK ++N  +  VK  N      + +  +    
Sbjct: 684 TINDILSSLKEENVISRGKKGAS---YKGKSIKNGMQFVVKEINDVNSIPSSEIAD---- 736

Query: 107 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE 166
           +G+L++  +  L+G C       L+ EY+    L++ L     + + W  R ++A+ IA+
Sbjct: 737 MGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVL-----RNLSWERRRKIAIGIAK 791

Query: 167 ALEY--CTSKERALYHDLNAYRIVFDDDVNPRLSCFGL-----MKNSRDGRSYSTNLAFT 219
           AL +  C      +  +L+  +I+ D    P L    L             S     A+ 
Sbjct: 792 ALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL-RLSLPGLLCTDTKCFISS-----AYV 845

Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA--------LDLIR----DRNIQT 267
            PE   T  +T +S +Y FG +L++LL+GK   P+ A        ++  R    D ++  
Sbjct: 846 APETRETKDITEKSDIYGFGLILIELLTGKS--PADAEFGVHGSIVEWARYCYSDCHLDM 903

Query: 268 LTDSCLEGQFSSD--EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE--VSCFL 323
             D  + G  S +  E  E++ LA  C   +P  RP    ++  L +  + +   V+   
Sbjct: 904 WIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSSSCVTGLK 963

Query: 324 FSSQF 328
           FSS F
Sbjct: 964 FSSLF 968

Length = 968

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 71.6 bits (175), Expect = 3e-14
 Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 14/236 (5%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+KG L+++  +AVK        + + +FL EAR + Q  +  +  L+G C +     +V
Sbjct: 11  VFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIV 70

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E +P       L   +   +K    ++ AL  A  + Y  SK   ++ DL A   +  +
Sbjct: 71  MELVPGGDFLSFL-RKKKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGE 128

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
           +   ++S FG+ +   DG   S+ L      +T PE L  GR + ES ++S+G LL +  
Sbjct: 129 NNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETF 188

Query: 247 SGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
           S    P P       R++  +    SC   Q   D   ++ ++  RC  Y+P  RP
Sbjct: 189 SLGVCPYPGMTNQQAREQVEKGYRMSC--PQKCPD---DVYKVMQRCWDYKPENRP 239

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 69.3 bits (169), Expect = 2e-13
 Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 18/250 (7%)

Query: 73  VYKGKLE-NQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           V+ G+L  +   +AVK    +  PD + +FL+EAR + Q  +  +  L+G C +     +
Sbjct: 11  VFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 70

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
           V E +        L   E   +K    +++  + A  +EY  SK   ++ DL A   +  
Sbjct: 71  VMELVQGGDFLTFL-RTEGPRLKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCLVT 128

Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           +    ++S FG+ +   DG   ST       + +T PE L  GR + ES ++SFG LL +
Sbjct: 129 EKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWE 188

Query: 245 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--ELVRLASRCLQYEPRERPN 302
             S   +P ++        N QT        +    E     + RL  RC +Y+P +RP+
Sbjct: 189 AFSLGAVPYANL------SNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPS 242

Query: 303 PRSLVTALVT 312
             ++   L +
Sbjct: 243 FSTVHQELQS 252

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 67.9 bits (166), Expect = 6e-13
 Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 37/220 (16%)

Query: 61  IVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNR 113
           +  E GE A   V+ G+  +      +  +AVK    +A  DAR+ F  EA  +   ++ 
Sbjct: 9   LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE 68

Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHL------------FHWETQPMKWAMRLRVA 161
            +    G C EGD  ++V EYM +  L K L                   +  +  L++A
Sbjct: 69  NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIA 128

Query: 162 LHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------ 215
           + IA  + Y  S +  ++ DL     +   D+  ++  FG+   SRD   Y+T+      
Sbjct: 129 VQIASGMVYLAS-QHFVHRDLATRNCLVGYDLVVKIGDFGM---SRD--VYTTDYYRVGG 182

Query: 216 -----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GK 249
                + + PPE +   + T ES ++SFG +L ++ + GK
Sbjct: 183 HTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGK 222

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 66.7 bits (163), Expect = 1e-12
 Identities = 56/243 (23%), Positives = 110/243 (45%), Gaps = 19/243 (7%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V++G  +N+ R+A+K          + F +E +A+ +LR++ L +L   C  G+   ++ 
Sbjct: 22  VWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           E M   +L   L   E Q +  A  + +A  +AE + Y   +  +++ DL A  I+  +D
Sbjct: 82  ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNILVGED 140

Query: 193 VNPRLSCFGLMKNSRDG--RSYSTNLAF--TPPEYLRTGRVTPESVMYSFGTLLLDLLSG 248
           +  +++ FGL +  ++    S    + +  T PE    G  + +S ++SFG LL ++ + 
Sbjct: 141 LVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTY 200

Query: 249 KHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP 303
             +P          D I           C +         E+ ++   C   EP +RP+ 
Sbjct: 201 GQVPYPGMNNHEVYDQITAGYRMPCPAKCPQ---------EIYKIMLECWAAEPEDRPSF 251

Query: 304 RSL 306
           ++L
Sbjct: 252 KAL 254

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 66.2 bits (161), Expect = 2e-12
 Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)

Query: 74  YKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVA 132
           Y+G      ++AVK     A   A+ FL EA  + QLR+  L  LLG   E    L +V 
Sbjct: 27  YRGN-----KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           EYM   +L  +L       +     L+ +L + EA+EY  +    ++ DL A  ++  +D
Sbjct: 80  EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSED 138

Query: 193 VNPRLSCFGLMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI 251
              ++S FGL K +   +      + +T PE LR  + + +S ++SFG LL ++ S   +
Sbjct: 139 NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198

Query: 252 P 252
           P
Sbjct: 199 P 199

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 66.1 bits (161), Expect = 2e-12
 Identities = 71/277 (25%), Positives = 114/277 (41%), Gaps = 36/277 (12%)

Query: 60  NIVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRN 112
            ++ E G+ +  +VY+G      K E + R+AVK  N SA    R +FL EA  +     
Sbjct: 9   TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 68

Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLR----VALHI 164
             +  LLG   +G   L+V E M +  L  +L       E  P +    L+    +A  I
Sbjct: 69  HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 128

Query: 165 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAF 218
           A+ + Y  +K + ++ DL A   +   D   ++  FG+ ++       R G      + +
Sbjct: 129 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 187

Query: 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCL 273
             PE L+ G  T  S M+SFG +L ++ S    P         L  + D       D+C 
Sbjct: 188 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 247

Query: 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
           E          +  L   C Q+ P+ RP    +V  L
Sbjct: 248 E---------RVTDLMRMCWQFNPKMRPTFLEIVNLL 275

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 65.6 bits (160), Expect = 3e-12
 Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 28/242 (11%)

Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++A+K   + S  P+A  FL EA  + QL++ RL  L     + +   ++
Sbjct: 22  VWMGYYNGHTKVAIKSLKQGSMSPEA--FLAEANLMKQLQHPRLVRLYAVVTQ-EPIYII 78

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM N +L   L   E   +     + +A  IAE + +   K   ++ DL A  I+  +
Sbjct: 79  TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSE 137

Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
            +  +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL +
Sbjct: 138 TLCCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTE 195

Query: 245 LLSGKHIPPSHALDLIRDRNIQTL-----TDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
           +++   IP     +    +N++        D+C E         EL  L   C + +P E
Sbjct: 196 IVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPE---------ELYELMRLCWKEKPEE 246

Query: 300 RP 301
           RP
Sbjct: 247 RP 248

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 65.9 bits (161), Expect = 3e-12
 Identities = 69/297 (23%), Positives = 120/297 (40%), Gaps = 54/297 (18%)

Query: 56  FAMENI--VSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARA 106
             +  +  + E GE A   VYKG+L       +   +A+K    +A P  +Q F +EA  
Sbjct: 2   IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAEL 61

Query: 107 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF-------------HWETQPMK 153
           +  L++  +  LLG C +     ++ EY+ +  L + L                  +   
Sbjct: 62  MSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSL 121

Query: 154 WAMR-LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 212
                L +A+ IA  +EY +S    ++ DL A   +  + +  ++S FGL   SRD   Y
Sbjct: 122 DCSDFLHIAIQIAAGMEYLSSHH-FVHRDLAARNCLVGEGLTVKISDFGL---SRDI--Y 175

Query: 213 STN-----------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHA 256
           S +           + + PPE +  G+ T ES ++SFG +L ++ S    P         
Sbjct: 176 SADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV 235

Query: 257 LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313
           +++IR R +    + C            +  L   C    P  RP  + + T L + 
Sbjct: 236 IEMIRSRQLLPCPEDC---------PARVYALMIECWNEIPARRPRFKDIHTRLRSW 283

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 65.9 bits (159), Expect = 7e-12
 Identities = 66/309 (21%), Positives = 106/309 (34%), Gaps = 30/309 (9%)

Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLR-NRRL 115
            I+ + GE +   VY  +  ++  +A+K   +          +FL E + +  L     +
Sbjct: 3   RILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI 60

Query: 116 ANLLGCCCEGDERLLVAEYMPNDTLAKHL-FHWETQPMKWAMRLRVALHIAEALEYCTSK 174
             L     +     LV EY+   +L   L       P+  +  L +   I  ALEY  SK
Sbjct: 61  VKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK 120

Query: 175 ERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRDGRSYSTN----------LAFTPPEY 223
              ++ D+    I+ D D    +L  FGL K   D  S S+             +  PE 
Sbjct: 121 -GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEV 179

Query: 224 LR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---RNIQTLTDSCLEGQF 277
           L        +  S ++S G  L +LL+G                 + I  L    L    
Sbjct: 180 LLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPL 239

Query: 278 SSDEG----TELVRLASRCLQYEPRERPNPRSLVT-ALVTLQKDTEVSCFLFSSQFTYAL 332
           S             L  + L  +P+ R +  S ++  L+   K  E            A 
Sbjct: 240 SPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSDLLKPDDSAP 299

Query: 333 LRLHIWSSS 341
           LRL +  S 
Sbjct: 300 LRLSLPPSL 308

Length = 384

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 64.4 bits (157), Expect = 7e-12
 Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 24/260 (9%)

Query: 62  VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGC 121
           + E G     VV+ GK   +  +A+K     A  +   F+EEA+ + +L +  L  L G 
Sbjct: 9   LKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSE-DDFIEEAKVMMKLSHPNLVQLYGV 67

Query: 122 CCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALY 179
           C +     +V EYM N  L  +L     +  K      L +   + EA+EY  S    ++
Sbjct: 68  CTKQRPIFIVTEYMANGCLLNYL---RERKGKLGTEWLLDMCSDVCEAMEYLESNG-FIH 123

Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESV 234
            DL A   +  +D   ++S FGL +   D +  S+      + + PPE     R + +S 
Sbjct: 124 RDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSD 183

Query: 235 MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE----GTELVRLAS 290
           ++SFG L+ ++ S   +P        R  N + + +S   G +         TE+  +  
Sbjct: 184 VWSFGVLMWEVFSEGKMPYE------RFSNSEVV-ESVSAG-YRLYRPKLAPTEVYTIMY 235

Query: 291 RCLQYEPRERPNPRSLVTAL 310
            C   +P +RP  + L++ L
Sbjct: 236 SCWHEKPEDRPAFKKLLSQL 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 64.7 bits (158), Expect = 7e-12
 Identities = 68/269 (25%), Positives = 114/269 (42%), Gaps = 33/269 (12%)

Query: 73  VYKGKLENQF-----RIAVKRFNRSAWPDARQFLEEARAVGQLRN---RRLANLLGCCCE 124
           V   + +        ++AVK  N S     R   E  R +  LR      +    G C +
Sbjct: 20  VELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFE--REIEILRTLDHENIVKYKGVCEK 77

Query: 125 GDER--LLVAEYMPNDTLAKHL-FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHD 181
              R   L+ EY+P+ +L  +L  H +   +K    L  +  I + ++Y  S+ R ++ D
Sbjct: 78  PGGRSLRLIMEYLPSGSLRDYLQRHRDQINLK--RLLLFSSQICKGMDYLGSQ-RYIHRD 134

Query: 182 LNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTNLAFTP-----PEYLRTGRVTPESV 234
           L A  I+ + +   ++S FGL K         Y      +P     PE LRT + +  S 
Sbjct: 135 LAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASD 194

Query: 235 MYSFGTLLLDLLS-GKH--IPPSHALDLI---RDRNIQT-LTDSCLEGQ-FSSDEG--TE 284
           ++SFG  L +L + G     PP+  L +I   + + I T L +   EG+          E
Sbjct: 195 VWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDE 254

Query: 285 LVRLASRCLQYEPRERPNPRSLVTALVTL 313
           +  L   C + EP++RP+   L+  +  L
Sbjct: 255 VYDLMKLCWEAEPQDRPSFADLILIVDRL 283

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 64.3 bits (156), Expect = 1e-11
 Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)

Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 13  ELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 72

Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHL--FHWETQ------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     E +      P      +++A  IA+ +
Sbjct: 73  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM 132

Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 133 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 191

Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 277
            L+ G  T  S ++SFG +L ++ +    P         L  + +  +    D+C +  F
Sbjct: 192 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLF 251

Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                 EL+R+   C QY P+ RP+   +++++
Sbjct: 252 ------ELMRM---CWQYNPKMRPSFLEIISSI 275

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 63.4 bits (154), Expect = 2e-11
 Identities = 58/256 (22%), Positives = 115/256 (44%), Gaps = 34/256 (13%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VV  GK   Q+ +A+K     +  +  +F+EEA+ + +L + +L  L G C +     +V
Sbjct: 19  VVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV 77

Query: 132 AEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
            EYM N    + L +H   ++   +     L +   + E + Y  SK+  ++ DL A   
Sbjct: 78  TEYMSNGCLLNYLREHGKRFQPSQL-----LEMCKDVCEGMAYLESKQ-FIHRDLAARNC 131

Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYST-----NLAFTPPEYLRTGRVTPESVMYSFGTLL 242
           + DD    ++S FGL +   D    S+      + ++PPE L   + + +S +++FG L+
Sbjct: 132 LVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLM 191

Query: 243 LDLLSGKHIPPSHALDLIRDR-NIQTLTDSCLEG------QFSSDEGTELVRLASRCLQY 295
            ++ S   +P         +R N     +   +G        +S+   ++  +   C   
Sbjct: 192 WEVYSLGKMP--------YERFNNSETVEKVSQGLRLYRPHLASE---KVYAIMYSCWHE 240

Query: 296 EPRERPNPRSLVTALV 311
           +  ERP  + L++++ 
Sbjct: 241 KAEERPTFQQLLSSIE 256

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 62.0 bits (151), Expect = 6e-11
 Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 11/187 (5%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+ G      ++AVK   +        FL+EA+ + +LR+ +L  L   C E +   +V 
Sbjct: 22  VWMGTWNGTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           EYM   +L   L   E + ++    + +A  IAE + Y  S+   ++ DL A  I+  ++
Sbjct: 81  EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR-NYIHRDLAARNILVGEN 139

Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +  +++ FGL +        +R+G  +   + +T PE    GR T +S ++SFG LL ++
Sbjct: 140 LVCKIADFGLARLIEDDEYTAREGAKFP--IKWTAPEAANYGRFTIKSDVWSFGILLTEI 197

Query: 246 LSGKHIP 252
           ++   +P
Sbjct: 198 VTYGRVP 204

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 62.2 bits (151), Expect = 6e-11
 Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 24/250 (9%)

Query: 84  IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTL 140
           +AVK   R         + +E   +  L +  +    GCC E   +   L+ EY+P  +L
Sbjct: 36  VAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSL 95

Query: 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200
             +L       +  A  L  A  I E + Y  S+   ++ DL A  ++ D+D   ++  F
Sbjct: 96  RDYL---PKHKLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDF 151

Query: 201 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKH 250
           GL K   +G  Y        + + +   E L+  + +  S ++SFG  L +LL+    K 
Sbjct: 152 GLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQ 211

Query: 251 IPPSHALDLIRDRNIQT----LTDSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNP 303
            PP    ++I  +  Q     L +    G       +   E+  L   C + E + RP  
Sbjct: 212 SPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTF 271

Query: 304 RSLVTALVTL 313
           RSL+  L  +
Sbjct: 272 RSLIPILKEM 281

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 61.8 bits (150), Expect = 7e-11
 Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 21/222 (9%)

Query: 100 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL-FHWETQPMKWAMRL 158
           F E A  + QL ++ L    G C  GDE ++V EY+   +L  +L  +     + W  +L
Sbjct: 46  FFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW--KL 103

Query: 159 RVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST--- 214
            VA  +A AL +   +++ L H ++ A  ++   + + +      +K S  G S +    
Sbjct: 104 EVAKQLAWALHFL--EDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK 161

Query: 215 -----NLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
                 + + PPE +   + ++  +  +SFGT L ++ SG   P S ALD    + +Q  
Sbjct: 162 EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLS-ALD--SQKKLQFY 218

Query: 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
            D     Q  + + TEL  L ++C+ YEP  RP+ R+++  L
Sbjct: 219 ED---RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 61.4 bits (149), Expect = 8e-11
 Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 32/254 (12%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VV+ GK   Q ++A+K  N  A  +   F+EEA+ + +L + +L  L G C +     +V
Sbjct: 19  VVHLGKWRAQIKVAIKAINEGAMSE-EDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIV 77

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M N  L  +L   + +  K  M L +   + E +EY   +   ++ DL A   +   
Sbjct: 78  TEFMENGCLLNYLRQRQGKLSK-DMLLSMCQDVCEGMEY-LERNSFIHRDLAARNCLVSS 135

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
               ++S FG+ +   D    S++ A     ++PPE     + + +S ++SFG L+ ++ 
Sbjct: 136 TGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVF 195

Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR--LAS--------RCLQYE 296
           +   +P        +  N + +             G  L R  LAS         C   +
Sbjct: 196 TEGKMP------FEKKSNYEVVE--------MISRGFRLYRPKLASMTVYEVMYSCWHEK 241

Query: 297 PRERPNPRSLVTAL 310
           P  RP    L+ A+
Sbjct: 242 PEGRPTFAELLRAI 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 60.8 bits (147), Expect = 1e-10
 Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 20/238 (8%)

Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK        P++  FLEEA+ + +LR+ +L  L     E +   +V
Sbjct: 22  VWMGTWNGNTKVAVKTLKPGTMSPES--FLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIV 78

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L   E + +K    + +A  +A  + Y   +   ++ DL +  I+  D
Sbjct: 79  TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAY-IERMNYIHRDLRSANILVGD 137

Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
            +  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 138 GLVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 195

Query: 245 LLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
           L++   +P P      + +R +    +         D    L  L  +C + +P ERP
Sbjct: 196 LVTKGRVPYPG-----MNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERP 248

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 60.6 bits (147), Expect = 2e-10
 Identities = 59/272 (21%), Positives = 107/272 (39%), Gaps = 37/272 (13%)

Query: 66  GEKAPNVVYKGKLE----NQFRIAVK--RFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
           GE     V +G+L     +Q ++AVK  + +   + +  +FL EA  +    +  +  L+
Sbjct: 8   GEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLI 67

Query: 120 GCCCEGDER------LLVAEYMPNDTLAKHLFH--WETQPMKWA--MRLRVALHIAEALE 169
           G C E          +++  +M +  L   L +      P K      L+  + IA  +E
Sbjct: 68  GVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGME 127

Query: 170 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EY 223
           Y +++   ++ DL A   +  +D+   ++ FGL K    G  Y        P      E 
Sbjct: 128 YLSNR-NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES 186

Query: 224 LRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFS 278
           L     T +S +++FG  + ++ +    P          D +R  N     + CL+    
Sbjct: 187 LADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLD---- 242

Query: 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                EL  L   C + +P++RP    L   L
Sbjct: 243 -----ELYDLMYSCWRADPKDRPTFTKLREVL 269

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 60.1 bits (145), Expect = 2e-10
 Identities = 60/238 (25%), Positives = 111/238 (46%), Gaps = 20/238 (8%)

Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++A+K     +  P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 22  VWMGTWNGTTKVAIKTLKPGTMMPEA--FLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIV 78

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M   +L   L   + + +K    + +A  IA+ + Y   +   ++ DL A  I+  D
Sbjct: 79  TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAY-IERMNYIHRDLRAANILVGD 137

Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 138 NLVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 195

Query: 245 LLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
           L++   +P P      + ++  +     C +G   S     L  L   C + +P ERP
Sbjct: 196 LVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPES-----LHELMKLCWKKDPDERP 248

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 60.0 bits (145), Expect = 2e-10
 Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 11/187 (5%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+ G   N  ++AVK   +      + FLEEA  +  L++ +L  L     + +   ++ 
Sbjct: 22  VWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           EYM   +L   L   E   +     +  +  IAE + Y   ++  ++ DL A  ++  + 
Sbjct: 81  EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAY-IERKNYIHRDLRAANVLVSES 139

Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +  +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL ++
Sbjct: 140 LMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLYEI 197

Query: 246 LSGKHIP 252
           ++   IP
Sbjct: 198 VTYGKIP 204

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 59.7 bits (144), Expect = 4e-10
 Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 18/237 (7%)

Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 22  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 78

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 79  TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 137

Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 138 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 195

Query: 245 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
           L +   +P    +    +R +    +         +    L  L  +C + EP ERP
Sbjct: 196 LTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERP 248

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 58.8 bits (142), Expect = 5e-10
 Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 12/198 (6%)

Query: 62  VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGC 121
           V E G     +V+ G    + ++A+K     A  +   F+EEA+ + +L + +L  L G 
Sbjct: 9   VQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSE-EDFIEEAQVMMKLSHPKLVQLYGV 67

Query: 122 CCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALY 179
           C E     LV E+M +  L+ +L     Q  K++    L + L + E + Y  S    ++
Sbjct: 68  CTERSPICLVFEFMEHGCLSDYL---RAQRGKFSQETLLGMCLDVCEGMAYLESSN-VIH 123

Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESV 234
            DL A   +  ++   ++S FG+ +   D +  S+      + ++ PE     + + +S 
Sbjct: 124 RDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSD 183

Query: 235 MYSFGTLLLDLLSGKHIP 252
           ++SFG L+ ++ S    P
Sbjct: 184 VWSFGVLMWEVFSEGKTP 201

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 57.9 bits (140), Expect = 1e-09
 Identities = 57/240 (23%), Positives = 109/240 (45%), Gaps = 21/240 (8%)

Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKH 143
           +AVK           +FL+EA  + ++++  L  LLG C       ++ E+M    L  +
Sbjct: 34  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 92

Query: 144 LFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203
           L     Q +   + L +A  I+ A+EY   K   ++ DL A   +  ++   +++ FGL 
Sbjct: 93  LRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 151

Query: 204 KNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL 257
           +    G +Y+ +      + +T PE L   + + +S +++FG LL ++ +   + P   +
Sbjct: 152 RLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGI 209

Query: 258 DLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERPNPRSLVTALVTL 313
           DL     +  L    LE  +  +  EG   ++  L   C Q+ P +RP+   +  A  T+
Sbjct: 210 DL---SQVYEL----LEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 57.8 bits (139), Expect = 2e-09
 Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 42/268 (15%)

Query: 79  ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           +++  +AVK    ++    + F  EA  +  L++  +    G C EGD  ++V EYM + 
Sbjct: 33  QDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 92

Query: 139 TLAKHL--------FHWETQP---MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
            L K L           E      +  +  L +A  IA  + Y  S +  ++ DL     
Sbjct: 93  DLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLATRNC 151

Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTN-----------LAFTPPEYLRTGRVTPESVMY 236
           +  +++  ++  FG+   SRD   YST+           + + PPE +   + T ES ++
Sbjct: 152 LVGENLLVKIGDFGM---SRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVW 206

Query: 237 SFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291
           S G +L ++ + GK     +  +  ++ I    +     +C +         E+  L   
Sbjct: 207 SLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPK---------EVYDLMLG 257

Query: 292 CLQYEPRERPNPRSLVTALVTLQKDTEV 319
           C Q EP  R N + + + L  L K + V
Sbjct: 258 CWQREPHMRLNIKEIHSLLQNLAKASPV 285

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 56.0 bits (136), Expect = 4e-09
 Identities = 55/182 (30%), Positives = 76/182 (41%), Gaps = 18/182 (9%)

Query: 126 DERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           +E+L LV EY P   L  HL        + A R   A  I  ALEY  S    +Y DL  
Sbjct: 65  EEKLYLVLEYAPGGELFSHLSKEGRFSEERA-RFYAA-EIVLALEYLHSL-GIIYRDLKP 121

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+ D D + +L+ FGL K      S +     TP    PE L           +S G 
Sbjct: 122 ENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGV 181

Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ--FSSDEGTELVRLASRCLQYEPR 298
           LL ++L+GK  PP +A       + + + +  L+    F      E   L S  LQ +P 
Sbjct: 182 LLYEMLTGK--PPFYA------EDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPT 233

Query: 299 ER 300
           +R
Sbjct: 234 KR 235

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 56.2 bits (136), Expect = 4e-09
 Identities = 63/267 (23%), Positives = 112/267 (41%), Gaps = 40/267 (14%)

Query: 64  EHGEKAPNVVYKGKLENQFR----IAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANL 118
           E GE     V +G+L+   +    +A+K     +    R  FL EA  +GQ  +  +  L
Sbjct: 16  EFGE-----VCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRL 70

Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 178
            G   +    +++ EYM N +L K L   + +       + +   IA  ++Y +  E   
Sbjct: 71  EGVVTKSRPVMIITEYMENGSLDKFLRENDGK-FTVGQLVGMLRGIASGMKYLS--EMNY 127

Query: 179 YH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-YSTN-----LAFTPPEYLRTGRVTP 231
            H DL A  I+ + ++  ++S FGL +   D  + Y+T      + +T PE +   + T 
Sbjct: 128 VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTS 187

Query: 232 ESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD--------SCLEGQFSSDEGT 283
            S ++SFG ++ +++S    P     D+     I+ + D         C           
Sbjct: 188 ASDVWSFGIVMWEVMSYGERP---YWDMSNQDVIKAVEDGYRLPPPMDCPSA-------- 236

Query: 284 ELVRLASRCLQYEPRERPNPRSLVTAL 310
            L +L   C Q +  ERP    +V+ L
Sbjct: 237 -LYQLMLDCWQKDRNERPTFSQIVSTL 262

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 56.6 bits (136), Expect = 5e-09
 Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 45/271 (16%)

Query: 79  ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           +++  +AVK          + F  EA  +  L++  +    G C +GD  ++V EYM + 
Sbjct: 33  KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 92

Query: 139 TLAKHL--------FHWETQPMK------WAMRLRVALHIAEALEYCTSKERALYHDLNA 184
            L K L           + QP +       +  L +A  IA  + Y  S +  ++ DL  
Sbjct: 93  DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS-QHFVHRDLAT 151

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----------LAFTPPEYLRTGRVTPES 233
              +   ++  ++  FG+   SRD   YST+           + + PPE +   + T ES
Sbjct: 152 RNCLVGANLLVKIGDFGM---SRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 206

Query: 234 VMYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288
            ++SFG +L ++ + GK     +  +  ++ I    +      C +         E+  +
Sbjct: 207 DVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPK---------EVYDI 257

Query: 289 ASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
              C Q EP++R N + +   L  L K T +
Sbjct: 258 MLGCWQREPQQRLNIKEIYKILHALGKATPI 288

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 56.2 bits (136), Expect = 5e-09
 Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 48/279 (17%)

Query: 56  FAMENIV--SEHGEKAPNVVYKGKLEN------QFRIAVKRFN-RSAWPDARQFLEEARA 106
              E I    E G+ +  +VY+G  +       + R+A+K  N  ++  +  +FL EA  
Sbjct: 3   LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASV 62

Query: 107 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL--------FHWETQPMKWAMRL 158
           + +     +  LLG    G   L+V E M    L  +L         +    P      +
Sbjct: 63  MKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFI 122

Query: 159 RVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--- 215
           ++A  IA+ + Y  +K + ++ DL A   +  +D+  ++  FG+   +RD   Y T+   
Sbjct: 123 QMAAEIADGMAYLAAK-KFVHRDLAARNCMVAEDLTVKIGDFGM---TRD--IYETDYYR 176

Query: 216 --------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP---PSH--ALDLIRD 262
                   + +  PE L+ G  T +S ++SFG +L ++ +    P    S+   L  + D
Sbjct: 177 KGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID 236

Query: 263 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
                L ++C +         +L+ L   C QY P+ RP
Sbjct: 237 GGHLDLPENCPD---------KLLELMRMCWQYNPKMRP 266

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 55.5 bits (134), Expect = 8e-09
 Identities = 44/187 (23%), Positives = 91/187 (48%), Gaps = 11/187 (5%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V++G   N   +AVK   +    D + FL EA+ + +LR+ +L  L   C   +   +V 
Sbjct: 22  VWEGLWNNTTPVAVKTL-KPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           E M   +L ++L     + +K    + +A  +A  + Y  + +  ++ DL A  ++  ++
Sbjct: 81  ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA-QNYIHRDLAARNVLVGEN 139

Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
              +++ FGL +        +R+G  +   + +T PE     R + +S ++SFG LL ++
Sbjct: 140 NICKVADFGLARVIKEDIYEAREGAKFP--IKWTAPEAALYNRFSIKSDVWSFGILLTEI 197

Query: 246 LSGKHIP 252
           ++   +P
Sbjct: 198 VTYGRMP 204

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 54.1 bits (131), Expect = 2e-08
 Identities = 53/241 (21%), Positives = 93/241 (38%), Gaps = 23/241 (9%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
            VYK +       +A+K     +     + + E + + + ++  +    G   + DE  +
Sbjct: 15  EVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWI 74

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
           V E+    +L K L     Q +  +    V   + + LEY  S    ++ D+ A  I+  
Sbjct: 75  VMEFCSGGSL-KDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN-GIIHRDIKAANILLT 132

Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLL 246
            D   +L  FGL     D ++    +  TP    PE +       ++ ++S G   ++L 
Sbjct: 133 SDGEVKLIDFGLSAQLSDTKA-RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELA 191

Query: 247 SGKHIPPSH------ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
            GK  PP        AL  I       L       +  SDE  + +    +CLQ  P +R
Sbjct: 192 EGK--PPYSELPPMKALFKIATNGPPGL----RNPEKWSDEFKDFL---KKCLQKNPEKR 242

Query: 301 P 301
           P
Sbjct: 243 P 243

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 53.9 bits (129), Expect = 3e-08
 Identities = 63/265 (23%), Positives = 109/265 (41%), Gaps = 42/265 (15%)

Query: 66  GEKAPNVVYKGKL---ENQFRIAVKRF-----NRSAWPDARQFLEEARAVGQLRNRRLAN 117
           GE     V +G+L   ++  ++AVK        RS   D   FL EA  + +  +  +  
Sbjct: 8   GEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMED---FLSEAVCMKEFDHPNVMR 64

Query: 118 LLGCCCEGDER------LLVAEYMPNDTLAKHLFHWE--TQP--MKWAMRLRVALHIAEA 167
           L+G C +  E       +++  +M +  L   L +      P  +   M ++    IA  
Sbjct: 65  LIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASG 124

Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPP 221
           +EY +SK   ++ DL A   + ++++N  ++ FGL K        R GR     + +   
Sbjct: 125 MEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAI 183

Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQ 276
           E L     T +S ++SFG  + ++ +    P      S   D +R  N       CL+G 
Sbjct: 184 ESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDCLDGL 243

Query: 277 FSSDEGTELVRLASRCLQYEPRERP 301
           +S         L S C    P++RP
Sbjct: 244 YS---------LMSSCWLLNPKDRP 259

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 53.7 bits (129), Expect = 3e-08
 Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 19/252 (7%)

Query: 66  GEKAPNVVYKGKLENQFRI-AVKRFNRSAWPDARQ--FLEEARAVGQLRNRRLANLLGCC 122
           G+ +  VV+K   +   R+ A+K+ + S      +   ++EAR + +L +  +       
Sbjct: 9   GKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESF 68

Query: 123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL 182
            +  +  +V EY  N  L K L     +P+      R  + I   L +  SK + L+ D+
Sbjct: 69  LDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDI 127

Query: 183 NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSF 238
            +  +  D   N ++   G+ K   D  +++  +  TP    PE         +S +++ 
Sbjct: 128 KSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWAL 187

Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF---SSDEGTELVRLASRCLQY 295
           G +L +  +GKH  P  A       N   L    + G F   S     +L +L  +CL  
Sbjct: 188 GVVLYECCTGKH--PFDA------NNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTK 239

Query: 296 EPRERPNPRSLV 307
           + R+RP+   L+
Sbjct: 240 DYRQRPDTFQLL 251

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 53.4 bits (129), Expect = 4e-08
 Identities = 40/156 (25%), Positives = 61/156 (39%), Gaps = 19/156 (12%)

Query: 158 LRVALHIAEALEYC----TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS 213
            R+   +  AL  C          L+ DL    I  D + N +L  FGL K      S++
Sbjct: 108 WRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFA 167

Query: 214 TNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNIQ 266
                TP    PE L       +S ++S G L+ +L +    PP  A   L L     I+
Sbjct: 168 KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS--PPFTARNQLQLA--SKIK 223

Query: 267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
                 +  ++SS    EL  +    L  +P +RP+
Sbjct: 224 EGKFRRIPYRYSS----ELNEVIKSMLNVDPDKRPS 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 52.3 bits (125), Expect = 1e-07
 Identities = 54/253 (21%), Positives = 100/253 (39%), Gaps = 46/253 (18%)

Query: 84  IAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL-- 140
           +AVK    +A   + R  L E   + Q+ +  +  L G C +    LL+ EY    +L  
Sbjct: 33  VAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRS 92

Query: 141 --------------------AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
                               + +L + + + +     +  A  I+  ++Y    E  L H
Sbjct: 93  FLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA--EMKLVH 150

Query: 181 -DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPES 233
            DL A  ++  +    ++S FGL ++  +  SY         + +   E L     T +S
Sbjct: 151 RDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQS 210

Query: 234 VMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288
            ++SFG LL ++++ G +    I P    +L++        ++C E         E+  L
Sbjct: 211 DVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSE---------EMYNL 261

Query: 289 ASRCLQYEPRERP 301
              C + EP +RP
Sbjct: 262 MLTCWKQEPDKRP 274

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 51.7 bits (124), Expect = 1e-07
 Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 36/234 (15%)

Query: 96  DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWA 155
           D+  F E A  + QL ++ L  L G C   DE ++V EY+    L   L H E   +   
Sbjct: 44  DSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFL-HREKNNVSLH 101

Query: 156 MRLRVALHIAEALEYCTSKE--------RALY---HDLNAYRIVFDDDVNPRLSCFGLMK 204
            +L VA  +A AL Y   K+        + +    + LN   + F    +P +    L +
Sbjct: 102 WKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR 161

Query: 205 NSRDGRSYSTNLAFTPPEYLRTGRVTPESVM--YSFGTLLLDLLSGKHIP-----PSHAL 257
             R  R       +  PE +R G+ +       +SFGT LL++ S    P      S   
Sbjct: 162 EERVERI-----PWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKE 216

Query: 258 DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311
              +D++   + D             EL  L ++C  Y+P +RP+ R+++  L 
Sbjct: 217 RFYQDQHRLPMPDC-----------AELANLINQCWTYDPTKRPSFRAILRDLN 259

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 11/157 (7%)

Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 157
           R FL EA  +GQ  +  +  L G    G+  ++V EYM N  L   L   E Q +  A +
Sbjct: 51  RGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLV--AGQ 108

Query: 158 LRVALH-IAEALEYCTSKERALYHD-LNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN 215
           L   L  +A  ++Y +  E    H  L A++++ + D+  ++S F  ++  +    Y+T 
Sbjct: 109 LMGMLPGLASGMKYLS--EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTM 166

Query: 216 -----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
                + +  PE ++    +  S ++SFG ++ +++S
Sbjct: 167 SGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMS 203

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 51.9 bits (124), Expect = 2e-07
 Identities = 56/261 (21%), Positives = 104/261 (39%), Gaps = 44/261 (16%)

Query: 84  IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
           +AVK         AR  FL+E + + +L+N  +  LLG C   D   ++ EYM N  L +
Sbjct: 47  VAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQ 106

Query: 143 HLFHWETQP----------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
            L   E +           +  A  L +A+ IA  ++Y  S    ++ DL     +  + 
Sbjct: 107 FLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGNH 165

Query: 193 VNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFGTLLLDLL 246
              +++ FG+ +N   G  Y        P      E +  G+ T  S +++FG  L ++ 
Sbjct: 166 YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMF 225

Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCL---EGQFSSDEGTE------------LVRLASR 291
           +           L +++    L+D  +    G+F  ++G +            + +L  R
Sbjct: 226 T-----------LCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMR 274

Query: 292 CLQYEPRERPNPRSLVTALVT 312
           C   + ++RP    +   L  
Sbjct: 275 CWSRDIKDRPTFNKIHHFLRE 295

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 51.5 bits (123), Expect = 2e-07
 Identities = 63/268 (23%), Positives = 111/268 (41%), Gaps = 52/268 (19%)

Query: 84  IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
           +AVK     A  +AR  FL+E + + +L++  +  LLG C + D   ++ EYM N  L +
Sbjct: 49  VAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQ 108

Query: 143 HLFHWETQ-----------------PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
            L                        + ++  L VAL IA  ++Y +S    ++ DL   
Sbjct: 109 FLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDLATR 167

Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFG 239
             +  +++  +++ FG+ +N   G  Y        P      E +  G+ T  S +++FG
Sbjct: 168 NCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFG 227

Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL---EGQFSSDEGTE------------ 284
             L ++L            L +++    LTD  +    G+F  D+G +            
Sbjct: 228 VTLWEILM-----------LCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQG 276

Query: 285 LVRLASRCLQYEPRERPNPRSLVTALVT 312
           L  L  +C   + RERP   S + A +T
Sbjct: 277 LYELMLQCWSRDCRERP-SFSDIHAFLT 303

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 51.2 bits (122), Expect = 2e-07
 Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 27/215 (12%)

Query: 100 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLR 159
           FL EA  +  L++ +L  L     + +   ++ E+M   +L   L   E         + 
Sbjct: 48  FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 106

Query: 160 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK-------NSRDGRSY 212
            +  IAE + +   +   ++ DL A  I+    +  +++ FGL +        +R+G  +
Sbjct: 107 FSAQIAEGMAF-IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 165

Query: 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP------PSHALDLIRDRNIQ 266
              + +T PE +  G  T +S ++SFG LL+++++   IP      P     L R   + 
Sbjct: 166 P--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP 223

Query: 267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
              ++C E         EL  +  RC +  P ERP
Sbjct: 224 R-PENCPE---------ELYNIMMRCWKNRPEERP 248

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 50.2 bits (120), Expect = 4e-07
 Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 32/257 (12%)

Query: 72  VVYKGKL--ENQFRI--AVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
            VY G L   +  +I  AVK  NR +   +  QFL+E   +    +  + +LLG C   +
Sbjct: 10  CVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE 69

Query: 127 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
              L+V  YM +  L ++    ET        +   L +A+ +EY  SK + ++ DL A 
Sbjct: 70  GSPLVVLPYMKHGDL-RNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAAR 127

Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYS 237
             + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++S
Sbjct: 128 NCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWS 187

Query: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG------QFSSDEGTELVRLASR 291
           FG LL +L++ +  PP        D +   +T   L+G      ++  D    L  +   
Sbjct: 188 FGVLLWELMT-RGAPP------YPDVDSFDITVYLLQGRRLLQPEYCPD---PLYEVMLS 237

Query: 292 CLQYEPRERPNPRSLVT 308
           C   +P  RP    LV+
Sbjct: 238 CWHPKPEMRPTFSELVS 254

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 50.2 bits (120), Expect = 5e-07
 Identities = 65/268 (24%), Positives = 108/268 (40%), Gaps = 49/268 (18%)

Query: 68  KAPNVVYKGKLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGD 126
           +AP ++     E    +AVK     A  D +  F  EA  + +  +  +  LLG C  G 
Sbjct: 25  RAPGLL---PYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81

Query: 127 ERLLVAEYMPNDTLAKHLFH----WETQ----------------PMKWAMRLRVALHIAE 166
              L+ EYM    L + L H     +                  P+    +L +A  +A 
Sbjct: 82  PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAA 141

Query: 167 ALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKN--SRDGRSYSTNLA----FT 219
            + Y +  ER   H DL     +  +++  +++ FGL +N  S D    S N A    + 
Sbjct: 142 GMAYLS--ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWM 199

Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD------LIRDRNIQTLTDSCL 273
           PPE +   R T ES ++++G +L ++ S   + P + +        +RD N+ +  D+C 
Sbjct: 200 PPESIFYNRYTTESDVWAYGVVLWEIFS-YGMQPYYGMAHEEVIYYVRDGNVLSCPDNC- 257

Query: 274 EGQFSSDEGTELVRLASRCLQYEPRERP 301
                     EL  L   C    P +RP
Sbjct: 258 --------PLELYNLMRLCWSKLPSDRP 277

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 50.0 bits (119), Expect = 7e-07
 Identities = 63/284 (22%), Positives = 118/284 (41%), Gaps = 48/284 (16%)

Query: 62  VSEHGEKAPNVVYKGKL-----ENQFRIAVKRF----NRSAWPDARQFLEEARAVGQLRN 112
           + E GE A   +YKG L     ++   +A+K      N   W +   F +EA  + +L +
Sbjct: 10  MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGE---FQQEASLMAELHH 66

Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW-----------ETQPMKWAMR---- 157
             +  LLG   +     ++ EY+    L + L              E   +K ++     
Sbjct: 67  PNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDF 126

Query: 158 LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-- 215
           L +A+ IA  +EY +S    ++ DL A  I+  + ++ ++S  GL +       Y     
Sbjct: 127 LHIAIQIAAGMEYLSS-HFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPK 185

Query: 216 ----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQ 266
               + + PPE +  G+ + +S ++SFG +L ++ S    P         ++++R R + 
Sbjct: 186 SLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLL 245

Query: 267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
             ++ C    +S         L + C Q  P  RP  + + T L
Sbjct: 246 PCSEDCPPRMYS---------LMTECWQEGPSRRPRFKDIHTRL 280

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 49.6 bits (118), Expect = 9e-07
 Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 23/198 (11%)

Query: 64  EHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANL 118
           E GE     V++G L+     +  +A+K          RQ FL EA  +GQ  +  +  L
Sbjct: 17  EFGE-----VFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRL 71

Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHL--FHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
            G   +    +++ EYM N  L K+L     E    +    LR    IA  ++Y  S   
Sbjct: 72  EGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLR---GIAAGMKY-LSDMN 127

Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYSTN-----LAFTPPEYLRTGRV 229
            ++ DL A  I+ + ++  ++S FGL +   D    +Y+T+     + +T PE +   + 
Sbjct: 128 YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKF 187

Query: 230 TPESVMYSFGTLLLDLLS 247
           T  S ++SFG ++ +++S
Sbjct: 188 TSASDVWSFGIVMWEVMS 205

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 49.1 bits (117), Expect = 1e-06
 Identities = 56/256 (21%), Positives = 102/256 (39%), Gaps = 35/256 (13%)

Query: 73  VYKGKL-------ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCE 124
           VY+G             R+AVK   + A    + +FL+EA  +    +  +  LLG C  
Sbjct: 11  VYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL 70

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAM-----RLRVALHIAEALEYCTSKERALY 179
            + + ++ E M    L  +L     +     +      L + L +A+   Y   +   ++
Sbjct: 71  NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVY-LEQMHFIH 129

Query: 180 HDLNAYRIV-----FDDDVNPRLSCFGLMKNSRDGRSYST------NLAFTPPEYLRTGR 228
            DL A   +     +D D   ++  FGL ++      Y         + +  PE L  G+
Sbjct: 130 RDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGK 189

Query: 229 VTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--EL 285
            T +S ++SFG L+ ++L+    P P+         N + L      G+    E    ++
Sbjct: 190 FTTQSDVWSFGVLMWEILTLGQQPYPALN-------NQEVLQHVTAGGRLQKPENCPDKI 242

Query: 286 VRLASRCLQYEPRERP 301
            +L + C   +P ERP
Sbjct: 243 YQLMTNCWAQDPSERP 258

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 48.8 bits (116), Expect = 1e-06
 Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 24/244 (9%)

Query: 76  GKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135
              E + ++ +K  + S    +  F E A  + Q+ ++ +  L G C    E ++V E++
Sbjct: 27  YSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFV 86

Query: 136 PNDTLAKHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYH------DLNAYRIV 188
               L   LF H ++  +    + +VA  +A AL Y   K+  L H      ++   R  
Sbjct: 87  EFGPL--DLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD--LVHGNVCTKNILLAREG 142

Query: 189 FDDDVNP--RLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDL 245
            D +  P  +LS  G+       +     + +  PE +   +  +  +  +SFGT L ++
Sbjct: 143 IDGECGPFIKLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEI 202

Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF--SSDEGTELVRLASRCLQYEPRERPNP 303
                IP       ++D+ +    +   EGQ    +    EL  L + C+ Y+P +RP  
Sbjct: 203 CYNGEIP-------LKDKTLAE-KERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRPFF 254

Query: 304 RSLV 307
           R+++
Sbjct: 255 RAIM 258

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 12/183 (6%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY  K   +  +AVK   +       ++FL EA  + QL +  +  L+G  C+G+  +LV
Sbjct: 15  VYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIG-VCKGEPLMLV 73

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E  P   L K+L   + + +  +    +A  +A  + Y  SK   ++ DL A  ++  +
Sbjct: 74  MELAPLGPLLKYLK--KRREIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLVN 130

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
               ++S FG+ +    G  Y          L +  PE +  G+ + +S ++S+G  L +
Sbjct: 131 RHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWE 190

Query: 245 LLS 247
             S
Sbjct: 191 AFS 193

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 48.0 bits (114), Expect = 3e-06
 Identities = 63/247 (25%), Positives = 109/247 (44%), Gaps = 34/247 (13%)

Query: 81  QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140
           + R+ +K  + S    A  F E A  + Q+ +  LA + G C  G E ++V E++ +  L
Sbjct: 44  ELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPL 103

Query: 141 AKHLFHWETQ-PMKWAMRLRVALHIAEALEYCTSKERALYH------DLNAYRIVFDDDV 193
              L   + + P+ W  ++ VA  +A AL Y   K   L H      ++   R+   +  
Sbjct: 104 DVCLRKEKGRVPVAW--KITVAQQLASALSYLEDKN--LVHGNVCAKNILLARLGLAEGT 159

Query: 194 NP--RLS--CFGLMKNSRDGRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSG 248
           +P  +LS         SR+ R     + +  PE +  G  ++  +  +SFGT LL++   
Sbjct: 160 SPFIKLSDPGVSFTALSREERV--ERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFD 217

Query: 249 KHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP 303
             +P     PS   +   ++  +    SC           EL  L S+CL YEP +RP+ 
Sbjct: 218 GEVPLKERTPSEK-ERFYEKKHRLPEPSC----------KELATLISQCLTYEPTQRPSF 266

Query: 304 RSLVTAL 310
           R+++  L
Sbjct: 267 RTILRDL 273

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 47.8 bits (114), Expect = 3e-06
 Identities = 51/226 (22%), Positives = 87/226 (38%), Gaps = 26/226 (11%)

Query: 100 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLR 159
           FL+EA  +  L +  L  L G        ++V E  P  +L   L          +    
Sbjct: 43  FLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCD 101

Query: 160 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---- 215
            A+ IA  + Y  SK R ++ DL A  I+   D   ++  FGLM+       +       
Sbjct: 102 YAVQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHL 160

Query: 216 ---LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-----GKHIPPSHALDLIRDRNIQT 267
               A+  PE LRT   +  S ++ FG  L ++ +        +  S  L  I D+  + 
Sbjct: 161 KVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI-DKEGER 219

Query: 268 LT--DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311
           L   ++C +         ++  +  +C  + P +RP   +L   L 
Sbjct: 220 LERPEACPQ---------DIYNVMLQCWAHNPADRPTFAALREFLP 256

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 47.7 bits (113), Expect = 3e-06
 Identities = 68/273 (24%), Positives = 110/273 (40%), Gaps = 52/273 (19%)

Query: 64  EHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLA 116
           E GE A   V+  +  N      +  +AVK   + A   ARQ F  EA  +  L+++ + 
Sbjct: 12  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL-KEASESARQDFQREAELLTVLQHQHIV 70

Query: 117 NLLGCCCEGDERLLVAEYMPNDTL----------AKHLFHWETQP---MKWAMRLRVALH 163
              G C EG   L+V EYM +  L          AK L   E      +     L +A  
Sbjct: 71  RFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQ 130

Query: 164 IAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------- 215
           IA  + Y  S    ++ DL     +    +  ++  FG+   SRD   YST+        
Sbjct: 131 IASGMVYLASLH-FVHRDLATRNCLVGQGLVVKIGDFGM---SRD--IYSTDYYRVGGRT 184

Query: 216 ---LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQT 267
              + + PPE +   + T ES ++SFG +L ++ + GK     +  + A++ I       
Sbjct: 185 MLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELE 244

Query: 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
              +C           E+  +   C Q EP++R
Sbjct: 245 RPRTC---------PPEVYAIMQGCWQREPQQR 268

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 47.4 bits (113), Expect = 4e-06
 Identities = 59/266 (22%), Positives = 100/266 (37%), Gaps = 27/266 (10%)

Query: 60  NIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLAN 117
            ++   G  A  VVY    L N  ++A+KR +         +  +E +A+ Q  +  +  
Sbjct: 4   ELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVK 63

Query: 118 LLGCCCEGDERLLVAEYMPNDTLA---KHLFHWETQPMKW-AMRLRVALHIAEALEYCTS 173
                  GDE  LV  Y+   +L    K  +          A  L+  L   + LEY  S
Sbjct: 64  YYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVL---KGLEYLHS 120

Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFG----LMKNSRDGRSYSTNLAFTP----PEYLR 225
             + ++ D+ A  I+  +D + +++ FG    L       R        TP    PE + 
Sbjct: 121 NGQ-IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVME 179

Query: 226 TGRVTPESV-MYSFGTLLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280
                     ++SFG   ++L +G       PP   L L    +  +L       ++S  
Sbjct: 180 QVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSK- 238

Query: 281 EGTELVRLASRCLQYEPRERPNPRSL 306
                 ++ S CLQ +P +RP    L
Sbjct: 239 ---SFRKMISLCLQKDPSKRPTAEEL 261

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 46.9 bits (111), Expect = 7e-06
 Identities = 51/235 (21%), Positives = 97/235 (41%), Gaps = 37/235 (15%)

Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--- 157
           +E  + +G+ +N  + NLLG C +     ++ EY     L ++L       M ++     
Sbjct: 68  MEMMKMIGKHKN--IINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCK 125

Query: 158 -----------LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206
                      +  A  +A  +EY  S+ + ++ DL A  ++  +D   +++ FGL ++ 
Sbjct: 126 LPEEQLTFKDLVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDNVMKIADFGLARDV 184

Query: 207 RDGRSY--STN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-----KHIPPSH 255
            +   Y  +TN    + +  PE L     T +S ++SFG LL ++ +        IP   
Sbjct: 185 HNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244

Query: 256 ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
              L+++ +      +C           EL  +   C    P +RP  + LV  L
Sbjct: 245 LFKLLKEGHRMDKPANCTH---------ELYMIMRECWHAVPSQRPTFKQLVEDL 290

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 46.7 bits (111), Expect = 7e-06
 Identities = 53/250 (21%), Positives = 97/250 (38%), Gaps = 42/250 (16%)

Query: 84  IAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
           +AVK    S    D   FL EA  + +  ++ +  L+G   E   R ++ E M    L  
Sbjct: 39  VAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKS 98

Query: 143 HLFHWE---TQPMKWAMR--LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197
            L        +P    M+  L  A  +A+  +Y       ++ D+ A   +        L
Sbjct: 99  FLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN-HFIHRDIAARNCL--------L 149

Query: 198 SC-----------FGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGT 240
           +C           FG+ ++      Y         + + PPE    G  T ++ ++SFG 
Sbjct: 150 TCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGV 209

Query: 241 LLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEG--TELVRLASRCLQYEP 297
           LL ++ S  ++P P          N + +      G+    +G    + R+ + C Q+ P
Sbjct: 210 LLWEIFSLGYMPYPGR-------TNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTP 262

Query: 298 RERPNPRSLV 307
            +RPN  +++
Sbjct: 263 EDRPNFATIL 272

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 46.6 bits (111), Expect = 8e-06
 Identities = 56/249 (22%), Positives = 96/249 (38%), Gaps = 23/249 (9%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY      +  +AVK       P  R+ FL+EA  + Q  +  +  L+G   E +   +V
Sbjct: 26  VYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E  P   L  +L       +  A  +  +  ++ AL Y  SK R ++ D+ A  ++   
Sbjct: 85  MELAPLGELRSYL-QVNKYSLDLASLILYSYQLSTALAYLESK-RFVHRDIAARNVLVSS 142

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLAFTP-----PEYLRTGRVTPESVMYSFGTLLLDLL 246
               +L  FGL +   D   Y  +    P     PE +   R T  S ++ FG  + ++L
Sbjct: 143 PDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 202

Query: 247 S-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
             G      +  +  +  I +     +  +C            L  L ++C  Y+P +RP
Sbjct: 203 MLGVKPFQGVKNNDVIGRIENGERLPMPPNC---------PPTLYSLMTKCWAYDPSKRP 253

Query: 302 NPRSLVTAL 310
               L   L
Sbjct: 254 RFTELKAQL 262

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 48/223 (21%), Positives = 92/223 (41%), Gaps = 16/223 (7%)

Query: 100 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF-------HWETQPM 152
           F  E     +L ++ +  LLG C E +   ++ EY     L + L          +  P+
Sbjct: 55  FRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPL 114

Query: 153 KWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 212
               ++ +   IA  +++  S  R ++ DL A   +       ++S   L K+  +   Y
Sbjct: 115 STKQKVALCTQIALGMDH-LSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY 173

Query: 213 STN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT 267
                   L +  PE ++    + +S ++SFG L+ ++ +   +P      L  +  +  
Sbjct: 174 KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFY---GLSDEEVLNR 230

Query: 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
           L    LE        + L +L +RC    P++RP+   LV+AL
Sbjct: 231 LQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSAL 273

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 44.7 bits (105), Expect = 3e-05
 Identities = 53/243 (21%), Positives = 104/243 (42%), Gaps = 19/243 (7%)

Query: 73  VYKGKLENQFR--IAVKRFN-RSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
           VYKG ++N+ +  +A+K  +   A  +     +E   + Q  +  +    G   +G +  
Sbjct: 20  VYKG-IDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLW 78

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
           ++ EY+   +    L   +  P++      +   I + L+Y  S ER ++ D+ A  ++ 
Sbjct: 79  IIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLHS-ERKIHRDIKAANVLL 134

Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDL 245
            +  + +L+ FG+     D +        TP    PE ++      ++ ++S G   ++L
Sbjct: 135 SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIEL 194

Query: 246 LSGKHIPPSHALDLIRDRN-IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 304
             G+  PP+  L  +R    I   +   LEGQ+S             CL  +PR RP  +
Sbjct: 195 AKGE--PPNSDLHPMRVLFLIPKNSPPTLEGQYSK----PFKEFVEACLNKDPRFRPTAK 248

Query: 305 SLV 307
            L+
Sbjct: 249 ELL 251

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 44.5 bits (105), Expect = 4e-05
 Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 27/201 (13%)

Query: 64  EHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLAN 117
           E GE     V +G+L+     +  +A+K   +S + +   R FL EA  +GQ  +  + +
Sbjct: 16  EFGE-----VCRGRLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNIIH 69

Query: 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWAMRLRVALHIAEALEYCTSKE 175
           L G   +    +++ E+M N  L   L   + Q   ++    LR    IA  ++Y  S+ 
Sbjct: 70  LEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR---GIAAGMKY-LSEM 125

Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS---YSTNLA------FTPPEYLRT 226
             ++ DL A  I+ + ++  ++S FGL +   D  S   Y+++L       +T PE +  
Sbjct: 126 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY 185

Query: 227 GRVTPESVMYSFGTLLLDLLS 247
            + T  S ++S+G ++ +++S
Sbjct: 186 RKFTSASDVWSYGIVMWEVMS 206

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 44.3 bits (104), Expect = 5e-05
 Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 10/174 (5%)

Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKH 143
           +A+K+ N    P     + E   + +L+N  + N L     GDE  +V EY+   +L   
Sbjct: 47  VAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDV 106

Query: 144 LFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203
           +        + A   R  L   +ALE+  + +  ++ D+ +  ++   D + +L+ FG  
Sbjct: 107 VTETCMDEAQIAAVCRECL---QALEFLHANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFC 162

Query: 204 KNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP 253
                 +S  + +  TP    PE +      P+  ++S G + ++++ G+  PP
Sbjct: 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 43.9 bits (103), Expect = 6e-05
 Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 40/246 (16%)

Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL---------FHWET-- 149
           +E  + +G+ +N  + NLLG C +     ++ EY     L ++L         + ++   
Sbjct: 71  MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIAR 128

Query: 150 ---QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK-- 204
              + M +   +     +A  +EY  S ++ ++ DL A  ++  ++   +++ FGL +  
Sbjct: 129 VPDEQMTFKDLVSCTYQVARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDV 187

Query: 205 NSRDGRSYSTN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDL--LSGK---HIPPSH 255
           N+ D    +TN    + +  PE L     T +S ++SFG L+ ++  L G     IP   
Sbjct: 188 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 247

Query: 256 ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL---VT 312
              L+++ +      +C           EL  +   C    P  RP  + LV  L   +T
Sbjct: 248 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298

Query: 313 LQKDTE 318
           L  + E
Sbjct: 299 LTTNEE 304

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 43.8 bits (103), Expect = 8e-05
 Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 37/235 (15%)

Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL--------------FH 146
           +E  + +G+ +N  + NLLG C +     ++ EY     L ++L                
Sbjct: 74  MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQ 131

Query: 147 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206
              + + +   +  A  +A  +EY  SK + ++ DL A  ++  +D   +++ FGL ++ 
Sbjct: 132 VPEEQLSFKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDI 190

Query: 207 R--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDL--LSGK---HIPPSH 255
              D    +TN    + +  PE L     T +S ++SFG LL ++  L G     +P   
Sbjct: 191 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 250

Query: 256 ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
              L+++ +      +C           EL  +   C    P +RP  + LV  L
Sbjct: 251 LFKLLKEGHRMDKPSNCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDL 296

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 43.7 bits (103), Expect = 8e-05
 Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 27/210 (12%)

Query: 84  IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
           +AVK     A  +AR  FL+E + + +L++  +  LL  C   D   ++ EYM N  L +
Sbjct: 49  VAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQ 108

Query: 143 HLFHWETQP---------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 193
            L   E Q          + ++  + +A  IA  ++Y +S    ++ DL     +   + 
Sbjct: 109 FLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVGKNY 167

Query: 194 NPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFGTLLLDLLS 247
             +++ FG+ +N   G  Y        P      E +  G+ T  S +++FG  L ++L+
Sbjct: 168 TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILT 227

Query: 248 -GKHIPPSHALD---------LIRDRNIQT 267
             K  P S   D           RD+  Q 
Sbjct: 228 LCKEQPYSQLSDEQVIENTGEFFRDQGRQV 257

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 43.5 bits (102), Expect = 9e-05
 Identities = 57/228 (25%), Positives = 94/228 (41%), Gaps = 16/228 (7%)

Query: 77  KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVAEYM 135
           KLE + RI  KR   S   + +Q LE+        N R    L    E  + L LV   M
Sbjct: 32  KLEKK-RIK-KRKGESMALNEKQILEKV-------NSRFVVSLAYAYETKDALCLVLTLM 82

Query: 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195
               L  H++H      +    +  A  I   LE    +ER +Y DL    I+ DD  + 
Sbjct: 83  NGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLED-LHQERIVYRDLKPENILLDDHGHI 141

Query: 196 RLSCFGLMKNSRDGRSYS---TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
           R+S  GL  +  +G++       + +  PE ++  R T     ++ G LL ++++G+  P
Sbjct: 142 RISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS-P 200

Query: 253 PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
                  I+   ++ L     E ++S     +   L    L  +P+ER
Sbjct: 201 FQQRKKKIKREEVERLVKEVQE-EYSEKFSPDARSLCKMLLCKDPKER 247

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 41/200 (20%)

Query: 73  VYKG-----KLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
           VYKG       + +  +A+K       P A +  L+EA  +  + +  +  LLG C    
Sbjct: 23  VYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICL-SS 81

Query: 127 ERLLVAEYMP-----------NDTL-AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK 174
           +  L+ + MP            D + +++L +W  Q             IA+ + Y   +
Sbjct: 82  QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQ-------------IAKGMSYL--E 126

Query: 175 ERALYH-DLNAYRIVFDDDVNPRLSCFGLMKN-SRDGRSYSTNLAFTP-----PEYLRTG 227
           E+ L H DL A  ++     + +++ FGL K    D + Y       P      E +   
Sbjct: 127 EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHR 186

Query: 228 RVTPESVMYSFGTLLLDLLS 247
             T +S ++S+G  + +L++
Sbjct: 187 IYTHKSDVWSYGVTVWELMT 206

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 43.1 bits (101), Expect = 1e-04
 Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 17/195 (8%)

Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG         +  +A+K  N +  P A  +F++EA  +  + +  L  LL
Sbjct: 16  GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 75

Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
           G C     + LV + MP+  L  ++ H     +   + L   + IA+ + Y   +ER L 
Sbjct: 76  GVCLSPTIQ-LVTQLMPHGCLLDYV-HEHKDNIGSQLLLNWCVQIAKGMMYL--EERRLV 131

Query: 180 H-DLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYL-----RTGRVTPE 232
           H DL A  ++     + +++ FGL +    D + Y+ +    P +++        + T +
Sbjct: 132 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 191

Query: 233 SVMYSFGTLLLDLLS 247
           S ++S+G  + +L++
Sbjct: 192 SDVWSYGVTIWELMT 206

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 43.0 bits (101), Expect = 1e-04
 Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 17/161 (10%)

Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT----LAKHLFHWETQPMK 153
           R FL EA  +GQ  +  + +L G   +    ++V EYM N +    L KH   +    + 
Sbjct: 50  RDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLV 109

Query: 154 WAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RS 211
             +R      IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +
Sbjct: 110 GMLR-----GIASGMKY-LSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA 163

Query: 212 YSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           Y+T      + +T PE +   + T  S ++S+G ++ +++S
Sbjct: 164 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 204

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 30/247 (12%)

Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMP----N 137
           +AVK+   S     R F  E   +  L++  +    G C     R   LV EY+P     
Sbjct: 36  VAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLR 95

Query: 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197
           D L KH    + + +     L  A  I + +EY  SK R ++ DL    I+ + +   ++
Sbjct: 96  DYLQKHRERLDHRKL-----LLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKI 149

Query: 198 SCFGLMKNSRDGRSYST-------NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH 250
             FGL K     + Y          + +  PE L   + +  S ++SFG +L +L +   
Sbjct: 150 GDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSD 209

Query: 251 I---PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRE 299
               PP+  + ++  D+  Q +    +E     G+  +  G   E+  +   C   +P +
Sbjct: 210 KSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQ 269

Query: 300 RPNPRSL 306
           RP+   L
Sbjct: 270 RPSFSEL 276

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 21/164 (12%)

Query: 159 RVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL---MKNSRDGRSYSTN 215
           ++A+ + E L Y  +  R ++ D+    I+ +     +L  FG+   + NS       T+
Sbjct: 107 KIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTS 166

Query: 216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK------------HIPPSHALDLIRDR 263
             +  PE ++ G+ T +S ++S G  +++L  GK               P   LDL++ +
Sbjct: 167 -TYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQ-Q 224

Query: 264 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 307
            +Q          F  D    L      CL  +P ERP P+ L 
Sbjct: 225 IVQEPPPRLPSSDFPED----LRDFVDACLLKDPTERPTPQQLC 264

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 42.0 bits (98), Expect = 2e-04
 Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)

Query: 66  GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           G+ A   VY    +     +A+++ N    P     + E   + + +N  + N L     
Sbjct: 29  GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           GDE  +V EY+   +L   +        + A   R  L   +ALE+  S +  ++ D+ +
Sbjct: 89  GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 144

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+   D + +L+ FG        +S  + +  TP    PE +      P+  ++S G 
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204

Query: 241 LLLDLLSGKHIPP 253
           + ++++ G+  PP
Sbjct: 205 MAIEMIEGE--PP 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 41.6 bits (97), Expect = 3e-04
 Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)

Query: 66  GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           G+ A   VY    +     +A+K+ N    P     + E   + + +N  + N L     
Sbjct: 28  GQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 87

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           GDE  +V EY+   +L   +        + A   R  L   +AL++  S +  ++ D+ +
Sbjct: 88  GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALDFLHSNQ-VIHRDIKS 143

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+   D + +L+ FG        +S  + +  TP    PE +      P+  ++S G 
Sbjct: 144 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203

Query: 241 LLLDLLSGKHIPP 253
           + ++++ G+  PP
Sbjct: 204 MAIEMVEGE--PP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 41.4 bits (98), Expect = 4e-04
 Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 23/146 (15%)

Query: 130 LVAEYMPND---TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
           +V EYM +D    L      +    +K  M+      + E L+Y  S    L+ D+    
Sbjct: 77  MVFEYMDHDLTGLLDSPEVKFTESQIKCYMK-----QLLEGLQYLHSN-GILHRDIKGSN 130

Query: 187 IVFDDDVNPRLSCFGLMK--NSRDGRSYSTNLAFT----PPEYLRTG--RVTPESVMYSF 238
           I+ ++D   +L+ FGL +    R+   Y TN   T    PPE L  G  R  PE  M+S 
Sbjct: 131 ILINNDGVLKLADFGLARPYTKRNSADY-TNRVITLWYRPPELL-LGATRYGPEVDMWSV 188

Query: 239 GTLLLDLLSGKHIPP----SHALDLI 260
           G +L +L  GK I         L+ I
Sbjct: 189 GCILAELFLGKPIFQGSTELEQLEKI 214

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 41.5 bits (97), Expect = 4e-04
 Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 35/225 (15%)

Query: 111 RNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAM 156
           +++ + NLLG C +     ++ EY     L + L                   + + +  
Sbjct: 76  KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKD 135

Query: 157 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--ST 214
            +  A  +A  +EY  S+ R ++ DL A  ++  +D   +++ FGL +   D   Y  ++
Sbjct: 136 LVSCAYQVARGMEYLESR-RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTS 194

Query: 215 N----LAFTPPEYLRTGRVTPESVMYSFGTLLLDL--LSGKH---IPPSHALDLIRDRNI 265
           N    + +  PE L     T +S ++SFG L+ ++  L G     IP      L+R+ + 
Sbjct: 195 NGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHR 254

Query: 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                +C           EL  L   C    P +RP  + LV AL
Sbjct: 255 MDKPSNCTH---------ELYMLMRECWHAVPTQRPTFKQLVEAL 290

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 41.1 bits (96), Expect = 5e-04
 Identities = 50/231 (21%), Positives = 101/231 (43%), Gaps = 34/231 (14%)

Query: 110 LRNRRLANLL---GCCCEGDER--LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHI 164
           LRN    N++   G C E       L+ E++P+ +L ++L       +    +L+ A+ I
Sbjct: 60  LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPR-NKNKINLKQQLKYAVQI 118

Query: 165 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST-------NLA 217
            + ++Y  S++  ++ DL A  ++ + +   ++  FGL K     + Y T        + 
Sbjct: 119 CKGMDYLGSRQY-VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVF 177

Query: 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSG------------KHIPPSHALDLIRDRNI 265
           +  PE L   +    S ++SFG  L +LL+             K I P+H   +   R +
Sbjct: 178 WYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHG-QMTVTRLV 236

Query: 266 QTLTDSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313
           + L     EG+      +   E+ +L  +C +++P +R   ++L+     +
Sbjct: 237 RVLE----EGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 40.6 bits (95), Expect = 7e-04
 Identities = 45/202 (22%), Positives = 77/202 (38%), Gaps = 26/202 (12%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           +VY  + L  Q RIA+K          +   EE      L++R +   LG   E     +
Sbjct: 23  IVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82

Query: 131 VAEYMPNDTLAKHL-FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN-AYRIV 188
             E +P  +L+  L   W          +     I E L+Y         HD    +R +
Sbjct: 83  FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKY--------LHDNQIVHRDI 134

Query: 189 FDDDV--NP-----RLSCFGLMKN----SRDGRSYSTNLAFTPPEYLRTGR--VTPESVM 235
             D+V  N      ++S FG  K     +    +++  L +  PE +  G       + +
Sbjct: 135 KGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADI 194

Query: 236 YSFGTLLLDLLSGKHIPPSHAL 257
           +S G  ++++ +GK  PP   L
Sbjct: 195 WSLGCTIVEMATGK--PPFIEL 214

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 40.2 bits (94), Expect = 7e-04
 Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 26/182 (14%)

Query: 126 DERLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHD 181
           D   LV ++     L  H+  +    E    +WA  + VAL   +AL     +E  +  D
Sbjct: 58  DSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVAL---DALH----REGIVCRD 110

Query: 182 LNAYRIVFDDDVNPRLSCFGL---MKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSF 238
           LN   I+ DD  + +L+ F     +++S DG +      +  PE       T     +S 
Sbjct: 111 LNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVEN--MYCAPEVGGISEETEACDWWSL 168

Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298
           G +L +LL+GK +   H         I T T   +  ++ S+E   L+    + LQ+ P 
Sbjct: 169 GAILFELLTGKTLVECHP------SGINTHTTLNIP-EWVSEEARSLL---QQLLQFNPT 218

Query: 299 ER 300
           ER
Sbjct: 219 ER 220

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 40.5 bits (95), Expect = 7e-04
 Identities = 54/247 (21%), Positives = 100/247 (40%), Gaps = 20/247 (8%)

Query: 76  GKLENQFRIAVKRFNRSAWPDARQFL-EEARAVGQLRNR-RLANLLGCCCEGDERLLVAE 133
            K +   ++AVK    +A    R+ L  E + +  L N   + NLLG C  G   L++ E
Sbjct: 60  SKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITE 119

Query: 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 193
           Y     L   L       +     L  +  +A+ + +  SK   ++ DL A  ++     
Sbjct: 120 YCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGK 178

Query: 194 NPRLSCFGLMKNSRDGRSY-STNLAFTP-----PEYLRTGRVTPESVMYSFGTLLLDLLS 247
             ++  FGL ++  +  +Y     A  P     PE +     T ES ++S+G LL ++ S
Sbjct: 179 IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFS 238

Query: 248 -GKHIPPSHALDLIRDRNIQTLTDS---CLEGQFSSDEGTELVRLASRCLQYEPRERPNP 303
            G +  P     +  D     L        + + +  E  ++++    C   +P +RP  
Sbjct: 239 LGSNPYP----GMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMK---TCWDADPLKRPTF 291

Query: 304 RSLVTAL 310
           + +V  +
Sbjct: 292 KQIVQLI 298

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 40.2 bits (94), Expect = 9e-04
 Identities = 36/174 (20%), Positives = 67/174 (38%), Gaps = 6/174 (3%)

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
           LV   M    L  H+++        A  +  A  I   LE+   + R +Y DL    ++ 
Sbjct: 70  LVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEH-LHQRRIVYRDLKPENVLL 128

Query: 190 DDDVNPRLSCFGL---MKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
           DD  N R+S  GL   +K  +  +  +    +  PE L+          ++ G  L +++
Sbjct: 129 DDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMI 188

Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
           +G   P     + +    ++  T   +  ++      E   L    LQ +P +R
Sbjct: 189 AG-RSPFRQRKEKVEKEELKRRTLE-MAVEYPDKFSPEAKDLCEALLQKDPEKR 240

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 40.1 bits (93), Expect = 0.001
 Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 18/181 (9%)

Query: 148 ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207
           E  P+       +   I + L+Y  S E+ ++ D+ A  ++  +    +L+ FG+     
Sbjct: 94  EPGPLDETQIATILREILKGLDYLHS-EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 152

Query: 208 DGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGK----HIPPSHALDL 259
           D +        TP    PE ++      ++ ++S G   ++L  G+     + P   L L
Sbjct: 153 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFL 212

Query: 260 IRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
           I   N  TL     EG +S      L      CL  EP  RP  + L+     ++   + 
Sbjct: 213 IPKNNPPTL-----EGNYSK----PLKEFVEACLNKEPSFRPTAKELLKHKFIVRFAKKT 263

Query: 320 S 320
           S
Sbjct: 264 S 264

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 39.9 bits (93), Expect = 0.001
 Identities = 47/210 (22%), Positives = 80/210 (38%), Gaps = 30/210 (14%)

Query: 83  RIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 141
           R+ VK    SA PD +  FL+E +   +L +  +   LG C E    LLV E+ P   L 
Sbjct: 24  RVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLK 83

Query: 142 KHL------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195
            +L           Q     +  R+A  +A  L +   +   ++ DL         D++ 
Sbjct: 84  NYLRSNRGMVAQMAQKD---VLQRMACEVASGLLW-LHQADFIHSDLALRNCQLTADLSV 139

Query: 196 RLSCFGLMKNSRDGRSYSTN------LAFTPPEY-------LRTGRVTPESVMYSFGTLL 242
           ++  +GL         Y T       L +  PE        L     T +S ++S G  +
Sbjct: 140 KIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTM 199

Query: 243 LDLLSGKHIPPSHALDL------IRDRNIQ 266
            +L +    P     D       +R+++I+
Sbjct: 200 WELFTAADQPYPDLSDEQVLKQVVREQDIK 229

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 39.9 bits (93), Expect = 0.001
 Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 11/193 (5%)

Query: 66  GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           G+ A   VY    +     +A+K+ N    P     + E   + + ++  + N L     
Sbjct: 28  GQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV 87

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           GDE  +V EY+   +L   +   ET  M       V     +ALE+  S +  ++ D+ +
Sbjct: 88  GDELWVVMEYLAGGSLTDVVT--ETC-MDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKS 143

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+   D + +L+ FG        +S  + +  TP    PE +      P+  ++S G 
Sbjct: 144 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203

Query: 241 LLLDLLSGKHIPP 253
           + ++++ G+  PP
Sbjct: 204 MAIEMVEGE--PP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 54/235 (22%), Positives = 96/235 (40%), Gaps = 37/235 (15%)

Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM--------------PNDTLAKHLFH 146
           +E  + +G+ +N  + NLLG C +     +V EY               P +  +     
Sbjct: 66  MEMMKMIGKHKN--IINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPR 123

Query: 147 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206
              + +     +  A  +A  +E+  SK + ++ DL A  ++  +D   +++ FGL ++ 
Sbjct: 124 PPEETLTQKDLVSFAYQVARGMEFLASK-KCIHRDLAARNVLVTEDHVMKIADFGLARDI 182

Query: 207 RDGRSY--STN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDL--LSGKHIP--PSHA 256
                Y  +TN    + +  PE L     T +S ++SFG LL ++  L G   P  P   
Sbjct: 183 HHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242

Query: 257 L-DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
           L  L+++        +C +         EL  L   C    P +RP  + LV  L
Sbjct: 243 LFKLLKEGYRMEKPQNCTQ---------ELYHLMRDCWHEVPSQRPTFKQLVEDL 288

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 50/243 (20%), Positives = 100/243 (41%), Gaps = 33/243 (13%)

Query: 62  VSEHGEKAPNVVYKGKL------ENQFRIAVKRF-NRSAWPDARQFLEEARAVGQLRNRR 114
           + E GE     VYKG L      E    +A+K   +++  P   +F  EA    +L++  
Sbjct: 10  MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPN 69

Query: 115 LANLLGCCCEGDERLLVAEYMPNDTLAKHLF----HWET------QPMKWAMR----LRV 160
           +  LLG   +     ++  Y  +  L + L     H +       + +K  +     + +
Sbjct: 70  IVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHI 129

Query: 161 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST------ 214
              IA  +E+ +S    ++ DL    ++  D +N ++S  GL +       Y        
Sbjct: 130 VTQIAAGMEFLSS-HHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLL 188

Query: 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLT 269
            + +  PE +  G+ + +S ++S+G +L ++ S    P         +++IR+R +    
Sbjct: 189 PIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCP 248

Query: 270 DSC 272
           D C
Sbjct: 249 DDC 251

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 19/263 (7%)

Query: 66  GEKAPNVVYKGKL----EN-QFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG      EN +  +A+K    +  P A ++ L+EA  +  + +  +  LL
Sbjct: 16  GSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLL 75

Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
           G C     +L V + MP   L  ++   + +     + L   + IA+ + Y   + R ++
Sbjct: 76  GICLTSTVQL-VTQLMPYGCLLDYVRENKDRIGSQDL-LNWCVQIAKGMSY-LEEVRLVH 132

Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKN-SRDGRSYSTNLAFTPPEYLRTG-----RVTPES 233
            DL A  ++     + +++ FGL +    D   Y  +    P +++        R T +S
Sbjct: 133 RDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQS 192

Query: 234 VMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
            ++S+G  + +L++    P     D I  R I  L +             ++  +  +C 
Sbjct: 193 DVWSYGVTVWELMTFGAKP----YDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCW 248

Query: 294 QYEPRERPNPRSLVTALVTLQKD 316
             +   RP  R LV     + +D
Sbjct: 249 MIDSECRPRFRELVDEFSRMARD 271

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 34/186 (18%)

Query: 103 EARAVGQLRNRRLANLLGCCCEGDERLL--VAEYMPNDTLAKHLFHWETQPMKWAMRLRV 160
           E R + ++ +  +  L     E D+R L  + EY+P   L  +L +        +  L  
Sbjct: 51  EKRVLKEVSHPFIIRLF--WTEHDQRFLYMLMEYVPGGELFSYLRNSGR--FSNSTGLFY 106

Query: 161 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP 220
           A  I  ALEY  SKE  +Y DL    I+ D + + +L+ FG  K  RD R+++  L  T 
Sbjct: 107 ASEIVCALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD-RTWT--LCGT- 161

Query: 221 PEYLRTGRVTPESVM----------YSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD 270
           PEYL      PE +           ++ G L+ ++L G   PP        D N   + +
Sbjct: 162 PEYL-----APEVIQSKGHNKAVDWWALGILIYEMLVG--YPP------FFDDNPFGIYE 208

Query: 271 SCLEGQ 276
             L G+
Sbjct: 209 KILAGK 214

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)

Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEY 223
           LEY  S  + ++ D+ A  I+ +++   +L+ FG+     D  +    +  TP    PE 
Sbjct: 112 LEYLHSN-KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEV 170

Query: 224 LRTGRVTPESVMYSFGTLLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279
           ++      ++ ++S G   +++  GK     I P  A+ +I ++   TL+D     ++S 
Sbjct: 171 IQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDP---EKWS- 226

Query: 280 DEGTELVRLASRCLQYEPRERPNPRSL 306
               E      +CL  +P ERP+   L
Sbjct: 227 ---PEFNDFVKKCLVKDPEERPSAIQL 250

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 23/199 (11%)

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           +V + G      +Y  K+  +  I  K          RQ LE  R     R   L  L  
Sbjct: 18  LVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVR-----RCPFLVTLH- 71

Query: 121 CCCEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE---ALEYCTSKER 176
              + D +L L+ +Y+    L  HL+  E           V ++IAE   AL+    +  
Sbjct: 72  YAFQTDTKLHLILDYVNGGELFTHLYQREHFTES-----EVRVYIAEIVLALD-HLHQLG 125

Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMK-----NSRDGRSYSTNLAFTPPEYLRTGRVTP 231
            +Y D+    I+ D + +  L+ FGL K           S+   + +  PE +R G    
Sbjct: 126 IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGH 185

Query: 232 ESVM--YSFGTLLLDLLSG 248
           +  +  +S G L  +LL+G
Sbjct: 186 DKAVDWWSLGVLTFELLTG 204

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 38.7 bits (90), Expect = 0.003
 Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 13/164 (7%)

Query: 96  DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL-VAEYMPNDTLAKHLFHWETQPMKW 154
           D    + E R +   RN      L CC +  +RL  V E++    L   +FH +      
Sbjct: 38  DVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFD 94

Query: 155 AMRLRV-ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDGRSY 212
             R R  A  I  AL +   K   +Y DL    ++ D + + +L+ FG+ K    +G++ 
Sbjct: 95  EARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTT 153

Query: 213 STNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
           ST    TP    PE L+     P    ++ G LL ++L G H P
Sbjct: 154 ST-FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCG-HAP 195

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	359
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	100.0
KOG0695	593	consensus Serine/threonine protein kinase [Signal	100.0
PLN03224	507	probable serine/threonine protein kinase; Provisio	100.0
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	100.0
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	100.0
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG1027	903	consensus Serine/threonine protein kinase and endo	100.0
KOG0576	829	consensus Mitogen-activated protein kinase kinase	100.0
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	100.0
KOG1152	772	consensus Signal transduction serine/threonine kin	100.0
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	100.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	100.0
KOG1290	590	consensus Serine/threonine protein kinase [Signal	100.0
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.97
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.97
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.97
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.97
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.96
PLN00181	793	protein SPA1-RELATED; Provisional	99.96
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.94
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.94
PRK09188	365	serine/threonine protein kinase; Provisional	99.94
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.93
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.92
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.92
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.92
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.92
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.91
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.91
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.9
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.9
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.88
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.87
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.87
PRK10345	210	hypothetical protein; Provisional	99.87
PRK12274	218	serine/threonine protein kinase; Provisional	99.87
smart00090	237	RIO RIO-like kinase.	99.85
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.85
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.83
PRK14879	211	serine/threonine protein kinase; Provisional	99.83
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.82
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.81
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.81
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.79
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.75
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.74
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.74
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.74
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.63
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.61
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.56
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.54
KOG1243	690	consensus Protein kinase [General function predict	99.53
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.51
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.48
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.4
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.4
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.37
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.37
KOG3087	229	consensus Serine/threonine protein kinase [General	99.35
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.34
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.21
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.16
COG4248	637	Uncharacterized protein with protein kinase and he	99.15
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.07
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.96
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.88
PRK09902	216	hypothetical protein; Provisional	98.87
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.85
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.83
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.61
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.6
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.56
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.52
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.5
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.42
PLN02876	822	acyl-CoA dehydrogenase	98.39
PF01636	239	APH: Phosphotransferase enzyme family This family	98.38
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.32
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	98.23
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.22
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.14
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.05
PRK10593	297	hypothetical protein; Provisional	98.03
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.95
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.85
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.85
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.84
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.69
PRK05231	319	homoserine kinase; Provisional	97.69
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	97.57
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.52
KOG2270	520	consensus Serine/threonine protein kinase involved	97.49
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.48
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	97.34
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	97.22
PLN02756	418	S-methyl-5-thioribose kinase	97.21
PLN02236	344	choline kinase	97.19
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	97.14
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	97.06
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	97.06
KOG1236	565	consensus Predicted unusual protein kinase [Genera	96.94
KOG1093	725	consensus Predicted protein kinase (contains TBC a	96.88
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	96.87
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	96.79
COG2334	331	Putative homoserine kinase type II (protein kinase	96.72
PRK12396	409	5-methylribose kinase; Reviewed	96.61
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	96.57
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	96.51
PRK11768	325	serine/threonine protein kinase; Provisional	96.22
PRK06148	1013	hypothetical protein; Provisional	96.08
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	95.96
PTZ00384	383	choline kinase; Provisional	95.37
PHA03111	444	Ser/Thr kinase; Provisional	94.78

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-55  Score=382.49  Aligned_cols=250  Identities=18%  Similarity=0.246  Sum_probs=211.3

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCc-ceEEEe
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDE-RLLVAE  133 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~lv~e  133 (359)
                      ++.+.++.||+|+.|+|||+.+ .+++.+|+|++...... ..+++.+|+++++..+||+||+++|.|..... ..|+||
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE  158 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME  158 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence            3566788899999999999995 57899999999655433 35789999999999999999999999999985 999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--CC
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RS  211 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--~~  211 (359)
                      ||++|||.+++.  ..+.+++....+++.+|++||.|||+..+||||||||+|||++..|.|||||||.++.....  ++
T Consensus       159 YMDgGSLd~~~k--~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~t  236 (364)
T KOG0581|consen  159 YMDGGSLDDILK--RVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANT  236 (364)
T ss_pred             hcCCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhccc
Confidence            999999999997  44779999999999999999999996349999999999999999999999999999876544  57


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhh-hhhhhccccccCCCChH-HHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-NIQTLTDSCLEGQFSSD-EGTELVRLA  289 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~l~~li  289 (359)
                      ++||..|||||.+.+..|+.++||||||++++|+.+|+.|++.........- .+..+.+ ...+..|.. +++++++++
T Consensus       237 fvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~-~ppP~lP~~~fS~ef~~FV  315 (364)
T KOG0581|consen  237 FVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD-EPPPRLPEGEFSPEFRSFV  315 (364)
T ss_pred             ccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc-CCCCCCCcccCCHHHHHHH
Confidence            7899999999999999999999999999999999999988876411000000 1111222 123344554 899999999


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 018244          290 SRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~  309 (359)
                      ..||++||.+|||+.+++++
T Consensus       316 ~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  316 SCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             HHHhcCCcccCCCHHHHhcC
Confidence            99999999999999999976

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-53  Score=391.89  Aligned_cols=274  Identities=35%  Similarity=0.618  Sum_probs=234.7

Q ss_pred             cccccCHHHHHHHhcCCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCccccccc
Q 018244           40 VFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL  119 (359)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~  119 (359)
                      ....|+++++..+|++|+..+++   |+|+||.||+|.++++..||||++.........+|.+|+.+|.+++|||+|+++
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~i---g~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~Ll  137 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLI---GEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLL  137 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcce---ecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEE
Confidence            56779999999999999998888   999999999999999899999988876543145599999999999999999999


Q ss_pred             ceeeeCC-cceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--CcccccCCCCCeeeCCCCCeE
Q 018244          120 GCCCEGD-ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE--RALYHDLNAYRIVFDDDVNPR  196 (359)
Q Consensus       120 ~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--~ivH~Dikp~NIll~~~~~~k  196 (359)
                      |||.+.+ ..+||+||+++|+|.+++.......++|.++.+|+.++|.||+|||...  .|+||||||+|||+|+++++|
T Consensus       138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK  217 (361)
T KOG1187|consen  138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK  217 (361)
T ss_pred             EEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence            9999998 4999999999999999997633328999999999999999999999963  499999999999999999999


Q ss_pred             EeccCCcccCCC-CCCc----CCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcch-----------hHHH
Q 018244          197 LSCFGLMKNSRD-GRSY----STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-----------LDLI  260 (359)
Q Consensus       197 l~DFg~a~~~~~-~~~~----~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~-----------~~~~  260 (359)
                      |+|||+|+.... ....    .||.+|+|||++..+..+.++|||||||+|+||+||+.+.....           ...+
T Consensus       218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~  297 (361)
T KOG1187|consen  218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL  297 (361)
T ss_pred             ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence            999999977664 3322    78999999999999999999999999999999999997654321           1223


Q ss_pred             hhhhhhhhcccccc-CCCCh-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          261 RDRNIQTLTDSCLE-GQFSS-DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       261 ~~~~~~~~~~~~~~-~~~~~-~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      .......++++.+. ..++. .....+..+...|++.+|.+||+|.+|++.|+.+...
T Consensus       298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~  355 (361)
T KOG1187|consen  298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL  355 (361)
T ss_pred             HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence            33456777777765 44443 5677799999999999999999999999999766543

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.5e-54  Score=376.88  Aligned_cols=249  Identities=17%  Similarity=0.233  Sum_probs=208.9

Q ss_pred             CCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCch-------HHHHHHHHHHHhcCCCcccccccceeeeCCc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD-------ARQFLEEARAVGQLRNRRLANLLGCCCEGDE  127 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  127 (359)
                      ++.|.+.+.||+|+||.|-+|. .++|+.||||++++.....       ...+.+|+++|++|+|||||+++++|..++.
T Consensus       171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds  250 (475)
T KOG0615|consen  171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS  250 (475)
T ss_pred             cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence            3456677889999999999998 6789999999998653221       2236799999999999999999999999999


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC---CCeEEeccCCcc
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMK  204 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~---~~~kl~DFg~a~  204 (359)
                      .|+||||+.||.|.+.+.  ....+.+..-..+++|++.|+.|||+. ||+||||||+|||+..+   ..+||+|||+|+
T Consensus       251 ~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~-GI~HRDiKPeNILl~~~~e~~llKItDFGlAK  327 (475)
T KOG0615|consen  251 SYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQ-GIIHRDIKPENILLSNDAEDCLLKITDFGLAK  327 (475)
T ss_pred             eEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHc-CcccccCCcceEEeccCCcceEEEecccchhh
Confidence            999999999999999997  556788888899999999999999999 99999999999999765   779999999999


Q ss_pred             cCCCC---CCcCCCccccCcccccCCC---CCCccchhhHHHHHHHHHhCCCCCCcchhHH-HhhhhhhhhccccccCCC
Q 018244          205 NSRDG---RSYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQF  277 (359)
Q Consensus       205 ~~~~~---~~~~~t~~y~aPE~~~~~~---~~~~~Di~slG~il~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~  277 (359)
                      .....   ++.+||+.|.|||++.+..   +..++|+||+||+||-+++|.+||.++..+. +.++....-..  ..+..
T Consensus       328 ~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~--f~p~~  405 (475)
T KOG0615|consen  328 VSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYA--FGPLQ  405 (475)
T ss_pred             ccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCccc--ccChh
Confidence            98755   4678999999999998765   3347899999999999999999998775544 33333221111  11122


Q ss_pred             ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ....+++..+||.+||..||++|||+.|+|++
T Consensus       406 w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h  437 (475)
T KOG0615|consen  406 WDRISEEALDLINWMLVVDPENRPSADEALNH  437 (475)
T ss_pred             hhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence            35688999999999999999999999999975

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-52  Score=381.19  Aligned_cols=253  Identities=27%  Similarity=0.399  Sum_probs=216.0

Q ss_pred             ccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCch--HHHHHHHHHHHhcCCCcccccccceeeeCC-cceEEEecCCC
Q 018244           61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGD-ERLLVAEYMPN  137 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~  137 (359)
                      +.+.+|.|+||+||+|.+.....||||.+.......  .+.|.+|+.+|.+++|||||+++|+|..+. .++|||||+++
T Consensus        45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~  124 (362)
T KOG0192|consen   45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG  124 (362)
T ss_pred             hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence            344479999999999999766559999998754333  458999999999999999999999999887 79999999999


Q ss_pred             CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-cccccCCCCCeeeCCCC-CeEEeccCCcccCCC----CCC
Q 018244          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER-ALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRD----GRS  211 (359)
Q Consensus       138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~-ivH~Dikp~NIll~~~~-~~kl~DFg~a~~~~~----~~~  211 (359)
                      |+|.+++.......+++..+..|+.||+.||.|||++ + ||||||||+|||++.++ ++||+|||+++....    ...
T Consensus       125 GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~-~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~  203 (362)
T KOG0192|consen  125 GSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE-GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTS  203 (362)
T ss_pred             CcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccC
Confidence            9999999754467899999999999999999999999 8 99999999999999997 999999999986553    233


Q ss_pred             cCCCccccCccccc--CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLR--TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       212 ~~~t~~y~aPE~~~--~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ..||+.|||||++.  ...|+.++||||||+++|||+||+.||.........    ..+.....++.++..+++.+..|+
T Consensus       204 ~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~----~~v~~~~~Rp~~p~~~~~~l~~l~  279 (362)
T KOG0192|consen  204 VAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVA----SAVVVGGLRPPIPKECPPHLSSLM  279 (362)
T ss_pred             CCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHH----HHHHhcCCCCCCCccCCHHHHHHH
Confidence            67899999999999  568999999999999999999999988766432222    222233344555666888999999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          290 SRCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      ..||+.||++||++.+++..|+.+.....
T Consensus       280 ~~CW~~dp~~RP~f~ei~~~l~~~~~~~~  308 (362)
T KOG0192|consen  280 ERCWLVDPSRRPSFLEIVSRLESIMSHIS  308 (362)
T ss_pred             HHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence            99999999999999999999998876443

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=9.2e-53  Score=386.76  Aligned_cols=244  Identities=17%  Similarity=0.213  Sum_probs=216.2

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ..|..-+.||+|||+.||.++. ..|..||+|++.+..   ....+++.+||++.+.|+|||||+++++|++.+++|||.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            5677777789999999999995 889999999998742   234677999999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---  209 (359)
                      |+|.+++|..+++  ....+++..++.+++||+.||.|||++ +|+|||||..|++++++.+|||+|||+|.....+   
T Consensus        98 ELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~-~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er  174 (592)
T KOG0575|consen   98 ELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSL-GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER  174 (592)
T ss_pred             EecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhc-CceecccchhheeecCcCcEEecccceeeeecCcccc
Confidence            9999999999997  567899999999999999999999999 9999999999999999999999999999887643   


Q ss_pred             -CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                       .+.+||+.|+|||++....++..+||||+||+||-||.|++||..............      .....|...+.++.+|
T Consensus       175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~------~~Y~~P~~ls~~A~dL  248 (592)
T KOG0575|consen  175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKL------NEYSMPSHLSAEAKDL  248 (592)
T ss_pred             cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHh------cCcccccccCHHHHHH
Confidence             467899999999999999999999999999999999999999988755544333322      1223466788999999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~  309 (359)
                      |.++|+.||.+|||+++|+++
T Consensus       249 I~~lL~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  249 IRKLLRPNPSERPSLDEVLDH  269 (592)
T ss_pred             HHHHhcCCcccCCCHHHHhcC
Confidence            999999999999999999975

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-52  Score=368.13  Aligned_cols=248  Identities=19%  Similarity=0.262  Sum_probs=211.3

Q ss_pred             CCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCC--CCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ..+|...++||.|+||+||+|+ ..++..||||.+...  .....+-+..|+.+|+.++|||||.+++++..++.+||||
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM   88 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM   88 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence            4577888889999999999999 456899999999877  3444666889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC------CCeEEeccCCcccC
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD------VNPRLSCFGLMKNS  206 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~------~~~kl~DFg~a~~~  206 (359)
                      |||+||+|.+|++  ..+.+++..+..++.|++.||++||++ +||||||||.||||+..      -.+||+|||+|+..
T Consensus        89 EyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~alq~L~~~-~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L  165 (429)
T KOG0595|consen   89 EYCNGGDLSDYIR--RRGRLPEATARHFMQQLASALQFLHEN-NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL  165 (429)
T ss_pred             EeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence            9999999999997  455899999999999999999999999 99999999999999754      56999999999998


Q ss_pred             CCCC---CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          207 RDGR---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       207 ~~~~---~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                      .++.   +.+|++-|||||++....|+.|+|+||+|+|+|++++|+.||......++......   ........+...+.
T Consensus       166 ~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k---~~~~~~~~~~~~s~  242 (429)
T KOG0595|consen  166 QPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKK---GNEIVPVLPAELSN  242 (429)
T ss_pred             CchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc---cccccCchhhhccC
Confidence            8664   56899999999999999999999999999999999999999987765554432211   11122233445566


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+.+|+...++.+|.+|.+..+....
T Consensus       243 ~~~~Ll~~ll~~~~~~~~~~~~~~~~  268 (429)
T KOG0595|consen  243 PLRELLISLLQRNPKDRISFEDFFDH  268 (429)
T ss_pred             chhhhhhHHHhcCccccCchHHhhhh
Confidence            67799999999999999888876543

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.8e-53  Score=355.25  Aligned_cols=250  Identities=18%  Similarity=0.231  Sum_probs=212.8

Q ss_pred             CcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccc-eeeeCCc-ceEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLG-CCCEGDE-RLLV  131 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~-~~~~~~~-~~lv  131 (359)
                      .+|+++++||.|+||+||++. ..+|..||.|.++.....  .......|+.+|++|+|||||++++ .+.+... ++||
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            468899999999999999998 778999999999855433  3456889999999999999999998 4555544 8999


Q ss_pred             EecCCCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhc--C-CCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          132 AEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTS--K-ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~--~-~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      ||||.+|+|.+.++..  .++.+++..+|+++.|++.||.++|+  . .-|+||||||.||+++.+|.+||+|||+++.+
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence            9999999999999753  46679999999999999999999999  3 13999999999999999999999999999998


Q ss_pred             CCCC----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCC-hHH
Q 018244          207 RDGR----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-SDE  281 (359)
Q Consensus       207 ~~~~----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  281 (359)
                      ....    +.+||+.||+||.+.+.+|+.++||||+||++|||+.-++||.+.....+...+.+.     ..++.| ...
T Consensus       179 ~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg-----d~~~~p~~~Y  253 (375)
T KOG0591|consen  179 SSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG-----DYPPLPDEHY  253 (375)
T ss_pred             cchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC-----CCCCCcHHHh
Confidence            7664    568999999999999999999999999999999999999999988665554444332     222234 678


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 018244          282 GTELVRLASRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       282 ~~~l~~li~~cl~~dp~~Rps~~~il~~L~  311 (359)
                      +.++..|+..|+..||++||+.-.++..+.
T Consensus       254 S~~l~~li~~ci~vd~~~RP~t~~~v~di~  283 (375)
T KOG0591|consen  254 STDLRELINMCIAVDPEQRPDTVPYVQDIQ  283 (375)
T ss_pred             hhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence            999999999999999999998655554443

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-51  Score=359.43  Aligned_cols=239  Identities=21%  Similarity=0.250  Sum_probs=209.8

Q ss_pred             CCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      +..++++++.||+|+||+||.++ .++++.+|+|++++...   ...+....|..+|..++||+||+++..|++++.+||
T Consensus        23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl  102 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL  102 (357)
T ss_pred             ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence            45677889999999999999998 55689999999987543   235668899999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC---
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR---  207 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~---  207 (359)
                      |+||+.||.|...|.  +.+.+++..+..++.+|+.||.|||++ |||||||||+|||+|.+|+++|+|||+++..-   
T Consensus       103 Vld~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~-gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~  179 (357)
T KOG0598|consen  103 VLDYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSK-GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG  179 (357)
T ss_pred             EEeccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhC-CeeeccCCHHHeeecCCCcEEEeccccchhcccCC
Confidence            999999999999997  567899999999999999999999999 99999999999999999999999999998532   


Q ss_pred             -CCCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          208 -DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       208 -~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                       .....+||+.|||||++.+..|+.++|+||||+++|||++|.+||.......+.+.....-     ....+...+.+++
T Consensus       180 ~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-----~~~~p~~ls~~ar  254 (357)
T KOG0598|consen  180 DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-----LPLPPGYLSEEAR  254 (357)
T ss_pred             CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-----CCCCCccCCHHHH
Confidence             3346789999999999999999999999999999999999999999887666555544432     1122344778999


Q ss_pred             HHHHHhcccCCCCCC
Q 018244          287 RLASRCLQYEPRERP  301 (359)
Q Consensus       287 ~li~~cl~~dp~~Rp  301 (359)
                      +++.++|+.||++|.
T Consensus       255 dll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  255 DLLKKLLKRDPRQRL  269 (357)
T ss_pred             HHHHHHhccCHHHhc
Confidence            999999999999996

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=3.1e-51  Score=347.00  Aligned_cols=249  Identities=20%  Similarity=0.291  Sum_probs=202.0

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc-h-HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-D-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .|+.++++|+|+||+||+|+. .+|+.||||++..+... . .+-.++|+++|++++|+|+|.++++|.....++||+||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            578899999999999999994 56999999999865432 2 33478999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC-CC---C
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR-DG---R  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~-~~---~  210 (359)
                      |+. ++.+.+.+ ....++...+..+++|++.|+.|+|++ +++||||||+|||++.+|.+||||||+|+... ++   +
T Consensus        83 ~dh-TvL~eLe~-~p~G~~~~~vk~~l~Q~l~ai~~cHk~-n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YT  159 (396)
T KOG0593|consen   83 CDH-TVLHELER-YPNGVPSELVKKYLYQLLKAIHFCHKN-NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYT  159 (396)
T ss_pred             cch-HHHHHHHh-ccCCCCHHHHHHHHHHHHHHhhhhhhc-CeecccCChhheEEecCCcEEeccchhhHhhcCCcchhh
Confidence            988 55555544 556789999999999999999999999 99999999999999999999999999999876 33   3


Q ss_pred             CcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcch-hHHHhh-------------------hhhhhhc
Q 018244          211 SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRD-------------------RNIQTLT  269 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~-~~~~~~-------------------~~~~~~~  269 (359)
                      .++.|.+|+|||.+.+ ..|..++||||+||++.||++|.+.+++.. .+....                   ..+..+.
T Consensus       160 DYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~  239 (396)
T KOG0593|consen  160 DYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVR  239 (396)
T ss_pred             hhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeee
Confidence            4567999999999998 569999999999999999999999887652 111110                   0000111


Q ss_pred             cccccCC-----CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          270 DSCLEGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       270 ~~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      -+.....     -.+..+.-+.+|+..||+.||++|++.++++.+
T Consensus       240 lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H  284 (396)
T KOG0593|consen  240 LPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH  284 (396)
T ss_pred             cCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence            0100000     012356688999999999999999999999864

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-51  Score=366.30  Aligned_cols=250  Identities=17%  Similarity=0.238  Sum_probs=207.1

Q ss_pred             CcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHH-HHHHHHHHHhcCC-CcccccccceeeeCC-cceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLR-NRRLANLLGCCCEGD-ERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~-~~~~e~~~l~~l~-h~niv~~~~~~~~~~-~~~lv~  132 (359)
                      ..|.++++||.|+||.||+|+ ...+..||||+++.....-.+ .-+||++.|++|. |||||++++++.+.+ .+++||
T Consensus        10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf   89 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF   89 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence            468899999999999999999 667889999999876433221 2478999999998 999999999999988 999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC---C
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---G  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~---~  209 (359)
                      |||+. +|.++++++ ...+++..+..|++||++||+|+|.+ |++|||+||+|||+..+..+||+|||+|+....   .
T Consensus        90 E~Md~-NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~-GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPY  166 (538)
T KOG0661|consen   90 EFMDC-NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH-GFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPY  166 (538)
T ss_pred             Hhhhh-hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc-CcccccCChhheEecccceeEecccccccccccCCCc
Confidence            99987 899999875 78999999999999999999999999 999999999999999999999999999998654   3


Q ss_pred             CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccc----------------
Q 018244          210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC----------------  272 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~----------------  272 (359)
                      +.++.|.+|+|||++.. +.|+.+.||||+|||++|+.+-++.|++...-.........+-.+.                
T Consensus       167 TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf  246 (538)
T KOG0661|consen  167 TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNF  246 (538)
T ss_pred             chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhcc
Confidence            56788999999998764 5699999999999999999999999987522111111111111110                


Q ss_pred             -cc---C----CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          273 -LE---G----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       273 -~~---~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                       +.   +    ..-+.++.++.+||.+|++.||++||||.+++++
T Consensus       247 ~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  247 RFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             CCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence             00   0    0112378899999999999999999999999986

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-50  Score=367.15  Aligned_cols=251  Identities=27%  Similarity=0.412  Sum_probs=216.2

Q ss_pred             ccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCC
Q 018244           59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      ..++++||+|-||.||.|.++....||+|.++... -..+.|.+|+++|++|+|+|||+++++|..+..++|||||++.|
T Consensus       208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G  286 (468)
T KOG0197|consen  208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG  286 (468)
T ss_pred             HHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence            46788899999999999999888799999998754 33567889999999999999999999999988999999999999


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCc--CC--
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--ST--  214 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~--~~--  214 (359)
                      +|.++|+...+..+...+.+.++.|||+|++||+++ ++|||||-+.||||+++..+||+|||+|+...++.-.  .+  
T Consensus       287 sLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~-~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~k  365 (468)
T KOG0197|consen  287 SLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK-NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGK  365 (468)
T ss_pred             cHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC-CccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCC
Confidence            999999876778899999999999999999999999 9999999999999999999999999999965544321  11  


Q ss_pred             -CccccCcccccCCCCCCccchhhHHHHHHHHHhCCC-CCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHh
Q 018244          215 -NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH-IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC  292 (359)
Q Consensus       215 -t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  292 (359)
                       ...|+|||.+..+.++.++|||||||+||||+|-.. |++.....     .....+....+-..|..++.++.++|..|
T Consensus       366 fPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~-----ev~~~le~GyRlp~P~~CP~~vY~lM~~C  440 (468)
T KOG0197|consen  366 FPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE-----EVLELLERGYRLPRPEGCPDEVYELMKSC  440 (468)
T ss_pred             CCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH-----HHHHHHhccCcCCCCCCCCHHHHHHHHHH
Confidence             357999999999999999999999999999999554 44443332     23334444455566788999999999999


Q ss_pred             cccCCCCCCCHHHHHHHHHHhhhc
Q 018244          293 LQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       293 l~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      |+.+|++|||++.+...|+.+...
T Consensus       441 W~~~P~~RPtF~~L~~~l~~~~~~  464 (468)
T KOG0197|consen  441 WHEDPEDRPTFETLREVLEDFFTS  464 (468)
T ss_pred             hhCCcccCCCHHHHHHHHHHhhhc
Confidence            999999999999999988887553

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=2.9e-49  Score=329.45  Aligned_cols=249  Identities=21%  Similarity=0.280  Sum_probs=206.1

Q ss_pred             CcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCch--HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ..|..++.+|+|.||.||+|+ ..+|+.||||++......+  .....+||+.|+.++|+||+.++++|-..+.+.||+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            357788889999999999999 6789999999998765443  3457899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC---
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~---  210 (359)
                      |++. +|...+++ +...++...+..|+.+++.||+|||++ .|+||||||.|+|++.+|.+||+|||+|+.+....   
T Consensus        82 fm~t-dLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~-~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~  158 (318)
T KOG0659|consen   82 FMPT-DLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSK-WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ  158 (318)
T ss_pred             eccc-cHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhh-hhhcccCCccceEEcCCCcEEeecccchhccCCCCccc
Confidence            9987 89999876 667899999999999999999999999 99999999999999999999999999999876543   


Q ss_pred             -CcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhh---------------------
Q 018244          211 -SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT---------------------  267 (359)
Q Consensus       211 -~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~---------------------  267 (359)
                       ..+.|.+|+|||.+.|.+ |+..+||||.|||+.||+-|.+.|++..--......+..                     
T Consensus       159 ~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~  238 (318)
T KOG0659|consen  159 THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKI  238 (318)
T ss_pred             ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHH
Confidence             235689999999998764 999999999999999999999877765211111111111                     


Q ss_pred             --hccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          268 --LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       268 --~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                        ...+.... .-..++.++.+|+.+||..||.+|+|+.+++++
T Consensus       239 ~~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  239 QQFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             hcCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence              11111111 123456778999999999999999999999976

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-49  Score=351.93  Aligned_cols=252  Identities=19%  Similarity=0.271  Sum_probs=206.8

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCC--cceEEEe
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERLLVAE  133 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e  133 (359)
                      ..+...+.||+|+||+||++.. ++|...|||.+...+....+.+.+|+.+|..++|||||+++|......  .++|+||
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME   96 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence            3456677789999999999995 458899999998765444677899999999999999999999855555  5899999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC-CCCeEEeccCCcccCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRD----  208 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~-~~~~kl~DFg~a~~~~~----  208 (359)
                      |+++|+|.+++.+... .+++..+..++.||+.||.|||++ |++||||||+|||++. ++.+||+|||+++....    
T Consensus        97 y~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~-g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~  174 (313)
T KOG0198|consen   97 YAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK-GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK  174 (313)
T ss_pred             ccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC-CEeccCcccceEEEeCCCCeEEeccCcccccccccccc
Confidence            9999999999986444 799999999999999999999999 9999999999999999 79999999999886652    


Q ss_pred             ---CCCcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHH
Q 018244          209 ---GRSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE  284 (359)
Q Consensus       209 ---~~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (359)
                         .....||+.|||||++..+. ...++|||||||++.||+||..|+...  .............. ..+.++...+.+
T Consensus       175 ~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig~~~-~~P~ip~~ls~~  251 (313)
T KOG0198|consen  175 SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIGRED-SLPEIPDSLSDE  251 (313)
T ss_pred             ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHhccC-CCCCCCcccCHH
Confidence               23567999999999999643 345999999999999999998877653  00111111111111 223567778899


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          285 LVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       285 l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      +++++.+|+..||++||||.++|++.--.
T Consensus       252 a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~  280 (313)
T KOG0198|consen  252 AKDFLRKCFKRDPEKRPTAEELLEHPFLK  280 (313)
T ss_pred             HHHHHHHHhhcCcccCcCHHHHhhChhhh
Confidence            99999999999999999999999875443

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.4e-49  Score=356.11  Aligned_cols=250  Identities=20%  Similarity=0.248  Sum_probs=204.5

Q ss_pred             CcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeC--CcceEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLV  131 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv  131 (359)
                      +.|+.+++||+|.||.||+|+ ..+|+.||+|++..+...  ...-..+||.+|++|.||||+++.+.....  ..+|+|
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV  196 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV  196 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence            457889999999999999999 678999999999876532  344568999999999999999999998876  689999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-  210 (359)
                      +|||+. +|..++.. ..-.+++.++..++.|++.||+|+|++ ||+|||||.+|||||++|.+||+|||+|++..... 
T Consensus       197 FeYMdh-DL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~-gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~  273 (560)
T KOG0600|consen  197 FEYMDH-DLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSR-GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS  273 (560)
T ss_pred             Eecccc-hhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhc-CeeeccccccceEEcCCCCEEeccccceeeccCCCC
Confidence            999998 79888853 456899999999999999999999999 99999999999999999999999999999765443 


Q ss_pred             ----CcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccc-------------
Q 018244          211 ----SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC-------------  272 (359)
Q Consensus       211 ----~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------------  272 (359)
                          ..+.|++|+|||.+.+.. |+.++|+||.||||.||++|++++++...-.....++...-.+.             
T Consensus       274 ~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~  353 (560)
T KOG0600|consen  274 APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHAT  353 (560)
T ss_pred             cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCccc
Confidence                345689999999999864 99999999999999999999998886532221111111000000             


Q ss_pred             -ccC--CC-------ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          273 -LEG--QF-------SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       273 -~~~--~~-------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                       ...  .+       -...+....+|+..+|..||++|.|+.++|+.
T Consensus       354 ~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s  400 (560)
T KOG0600|consen  354 IFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS  400 (560)
T ss_pred             ccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence             000  00       12346788999999999999999999999863

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-49  Score=359.78  Aligned_cols=248  Identities=18%  Similarity=0.269  Sum_probs=214.8

Q ss_pred             CCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      .-..|....++|+|+.|.||.|. ..++..||||++........+-+.+|+.+|+..+|+|||++++.|...+.+|.|||
T Consensus       271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME  350 (550)
T KOG0578|consen  271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVME  350 (550)
T ss_pred             hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence            34456667788999999999998 66788999999998877777789999999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |++||+|.+.+   ....+++.++..|++++++||+|||.+ ||+|||||.+|||++.+|.+||+|||++......    
T Consensus       351 ym~ggsLTDvV---t~~~~~E~qIA~Icre~l~aL~fLH~~-gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR  426 (550)
T KOG0578|consen  351 YMEGGSLTDVV---TKTRMTEGQIAAICREILQGLKFLHAR-GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKR  426 (550)
T ss_pred             ecCCCchhhhh---hcccccHHHHHHHHHHHHHHHHHHHhc-ceeeeccccceeEeccCCcEEEeeeeeeeccccccCcc
Confidence            99999999999   556799999999999999999999999 9999999999999999999999999998776543    


Q ss_pred             CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ...+||+.|||||++....|++++||||||++.+||+-|++||..+.--..   ..............+...+..+++|+
T Consensus       427 ~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrA---lyLIa~ng~P~lk~~~klS~~~kdFL  503 (550)
T KOG0578|consen  427 STMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---LYLIATNGTPKLKNPEKLSPELKDFL  503 (550)
T ss_pred             ccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHH---HHHHhhcCCCCcCCccccCHHHHHHH
Confidence            467899999999999999999999999999999999999998875422111   11111122223344567889999999


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 018244          290 SRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+||..|+++|+++.++|++
T Consensus       504 ~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  504 DRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             HHHhhcchhcCCCHHHHhcC
Confidence            99999999999999999976

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-49  Score=332.79  Aligned_cols=236  Identities=18%  Similarity=0.215  Sum_probs=209.9

Q ss_pred             CCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCch---HHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      ..++++++.||.|+||.|.+++ ..+|..+|+|++.+.....   .+...+|..+|+.+.||+++++.+.|.+.+++++|
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv  122 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV  122 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence            4567889999999999999999 4568899999998765443   44578899999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-C
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-R  210 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-~  210 (359)
                      |||++||.|.++++  +.+.+++..++.++.||+.||+|||++ +|++||+||+|||+|.+|.+||+|||+|+..... -
T Consensus       123 meyv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~-~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~  199 (355)
T KOG0616|consen  123 MEYVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSL-DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTW  199 (355)
T ss_pred             EeccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhc-CeeeccCChHHeeeccCCcEEEEeccceEEecCcEE
Confidence            99999999999997  667899999999999999999999999 9999999999999999999999999999987654 3


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      +.+||+.|+|||+++..+|+.++|.|||||++|||+.|.+||.......+.+.+...      .-.+|...+.++++|+.
T Consensus       200 TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~------~v~fP~~fs~~~kdLl~  273 (355)
T KOG0616|consen  200 TLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEG------KVKFPSYFSSDAKDLLK  273 (355)
T ss_pred             EecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhC------cccCCcccCHHHHHHHH
Confidence            668999999999999999999999999999999999999999887654444443332      12467788899999999


Q ss_pred             HhcccCCCCC
Q 018244          291 RCLQYEPRER  300 (359)
Q Consensus       291 ~cl~~dp~~R  300 (359)
                      .+|+.|-.+|
T Consensus       274 ~LL~vD~t~R  283 (355)
T KOG0616|consen  274 KLLQVDLTKR  283 (355)
T ss_pred             HHHhhhhHhh
Confidence            9999999999

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-49  Score=356.80  Aligned_cols=247  Identities=20%  Similarity=0.237  Sum_probs=213.0

Q ss_pred             cCCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcC-CCcccccccceeeeCCcc
Q 018244           54 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDER  128 (359)
Q Consensus        54 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~  128 (359)
                      ....+|.+.+.||.|+|++|++|+ ...++.+|||++.+.-.   ...+.+.+|-.+|..| .||.|++++-.|.+...+
T Consensus        70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL  149 (604)
T KOG0592|consen   70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL  149 (604)
T ss_pred             CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence            345567778888999999999999 56789999999976422   2245678899999999 799999999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      |+|+||+++|.|.++|.  +-+.+++...+.++.||+.||+|||++ |||||||||+|||||.+++++|+|||.|+...+
T Consensus       150 YFvLe~A~nGdll~~i~--K~Gsfde~caR~YAAeIldAleylH~~-GIIHRDlKPENILLd~dmhikITDFGsAK~l~~  226 (604)
T KOG0592|consen  150 YFVLEYAPNGDLLDLIK--KYGSFDETCARFYAAEILDALEYLHSN-GIIHRDLKPENILLDKDGHIKITDFGSAKILSP  226 (604)
T ss_pred             EEEEEecCCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence            99999999999999997  557899999999999999999999999 999999999999999999999999999986542


Q ss_pred             C-----------------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccc
Q 018244          209 G-----------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS  271 (359)
Q Consensus       209 ~-----------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~  271 (359)
                      .                 ..++||..|.+||++.....+..+|+|+||||||+|+.|.+||-....-...+.+..     
T Consensus       227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~-----  301 (604)
T KOG0592|consen  227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQA-----  301 (604)
T ss_pred             hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHH-----
Confidence            1                 246799999999999999999999999999999999999999987654443333322     


Q ss_pred             cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       272 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                       +.-.++...++.+.+|+.+.|..||.+|+|+++|-++
T Consensus       302 -l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  302 -LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             -hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence             2334667778899999999999999999999888764

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-47  Score=351.66  Aligned_cols=244  Identities=20%  Similarity=0.232  Sum_probs=208.9

Q ss_pred             CCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCC----CC-chHHHHHHHHHHHhcCC-CcccccccceeeeCCcc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS----AW-PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDER  128 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~----~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~  128 (359)
                      ...|.+.+.||+|+||+|+.|. ..++..||+|++.+.    .. ...+.+.+|+.+++.++ ||||+++++++......
T Consensus        16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~   95 (370)
T KOG0583|consen   16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI   95 (370)
T ss_pred             cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence            4578888899999999999998 556899999987764    11 22445678999999998 99999999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC-CCeEEeccCCcccCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSR  207 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~-~~~kl~DFg~a~~~~  207 (359)
                      ++||||+.||.|.+++.+  .+.+.+..+..+++|++.|++|+|++ ||+||||||+|||++.+ +++||+|||++....
T Consensus        96 ~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~-gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~  172 (370)
T KOG0583|consen   96 YIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSR-GIVHRDLKPENILLDGNEGNLKLSDFGLSAISP  172 (370)
T ss_pred             EEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence            999999999999999974  67899999999999999999999999 99999999999999999 999999999999772


Q ss_pred             -C---CCCcCCCccccCcccccCCC-CC-CccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHH
Q 018244          208 -D---GRSYSTNLAFTPPEYLRTGR-VT-PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE  281 (359)
Q Consensus       208 -~---~~~~~~t~~y~aPE~~~~~~-~~-~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (359)
                       .   .....||+.|+|||++.+.. |+ .++||||+||+||.|++|..||.......+......    .  ...++...
T Consensus       173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~----~--~~~~p~~~  246 (370)
T KOG0583|consen  173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRK----G--EFKIPSYL  246 (370)
T ss_pred             CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhc----C--CccCCCCc
Confidence             2   35678999999999999877 86 589999999999999999999987544433333111    1  12234445


Q ss_pred             -HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          282 -GTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       282 -~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                       +.++..|+.+||..||.+|+|+.+++.
T Consensus       247 ~S~~~~~Li~~mL~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  247 LSPEARSLIEKMLVPDPSTRITLLEILE  274 (370)
T ss_pred             CCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence             899999999999999999999999993

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-47  Score=338.62  Aligned_cols=255  Identities=16%  Similarity=0.216  Sum_probs=211.9

Q ss_pred             cCCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCch-HHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           54 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        54 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      .+-++|++...||.|.-++||+|. .+.+..||||++....... .+.+.+|++.|+.++||||++++..|..+..+|+|
T Consensus        23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV  102 (516)
T KOG0582|consen   23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV  102 (516)
T ss_pred             CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence            355789999999999999999998 6778999999999765443 57899999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--  209 (359)
                      |.||.+||+.+.++..-...+++..+..|.++++.||.|||++ |.||||||+.||||+++|.|||+|||.+-.....  
T Consensus       103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~-G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~  181 (516)
T KOG0582|consen  103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN-GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD  181 (516)
T ss_pred             ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc-CceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence            9999999999999876677799999999999999999999999 9999999999999999999999999975432211  


Q ss_pred             ------CCcCCCccccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCC----
Q 018244          210 ------RSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF----  277 (359)
Q Consensus       210 ------~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----  277 (359)
                            +...||++|||||++..  ..|+.|+||||||++..||.+|..||.......+.-..++.-.........    
T Consensus       182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~  261 (516)
T KOG0582|consen  182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDE  261 (516)
T ss_pred             eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHH
Confidence                  45678999999999553  359999999999999999999999987654333222222221111111111    


Q ss_pred             ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ....+..+++++..||.+||.+|||+.+++..
T Consensus       262 ~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh  293 (516)
T KOG0582|consen  262 DKKFSKSFREMIALCLVKDPSKRPTASKLLKH  293 (516)
T ss_pred             hhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence            22356789999999999999999999999864

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=5.2e-48  Score=351.14  Aligned_cols=242  Identities=19%  Similarity=0.253  Sum_probs=212.4

Q ss_pred             cccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .|.+.+.+|+|+||.||||+ ..+.+.||+|.+.+....  +.+.+.+|+++++.++|||||.++++|+...++++|+||
T Consensus         3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~   82 (808)
T KOG0597|consen    3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY   82 (808)
T ss_pred             chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence            45566667999999999998 556889999999876533  356789999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----  210 (359)
                      +.| +|..++.  ....++++.+..++.+++.||.|||++ +|+|||+||.|||++..|.+|++|||+|+.....+    
T Consensus        83 a~g-~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~-rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vlt  158 (808)
T KOG0597|consen   83 AVG-DLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSN-RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLT  158 (808)
T ss_pred             hhh-hHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhc-CcccccCCcceeeecCCCceeechhhhhhhcccCceeee
Confidence            977 9999997  667899999999999999999999999 99999999999999999999999999999877654    


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ...||+-|||||.+.+..|+..+|+||+|||+||+++|++||...........+..+.      ..++...+..+.+++.
T Consensus       159 sikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~------v~~p~~~S~~f~nfl~  232 (808)
T KOG0597|consen  159 SIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDP------VKPPSTASSSFVNFLQ  232 (808)
T ss_pred             eccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCC------CCCcccccHHHHHHHH
Confidence            4579999999999999999999999999999999999999998765544433333321      2345678899999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~  309 (359)
                      ..|.+||.+|.|..+++.+
T Consensus       233 gLL~kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  233 GLLIKDPAQRLTWTDLLGH  251 (808)
T ss_pred             HHhhcChhhcccHHHHhcC
Confidence            9999999999999999865

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=1.5e-47  Score=347.35  Aligned_cols=248  Identities=16%  Similarity=0.154  Sum_probs=207.8

Q ss_pred             CCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      ...++.++..||+||||.||.|+ ..+|..+|+|+++++..   ...+.++.|-.+|....+|.||+++..|++.+++||
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            56788899999999999999999 55799999999997643   335568889999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC--
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--  208 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~--  208 (359)
                      ||||++||++..+|.  ....|++..+..++.+++.|+.-||+. |+|||||||+|+|||..|++||+|||++.....  
T Consensus       219 iMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~-gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~  295 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQL-GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH  295 (550)
T ss_pred             EEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHc-CcccccCChhheeecCCCCEeeccccccchhhhhh
Confidence            999999999999997  677899999999999999999999999 999999999999999999999999999742110  


Q ss_pred             -----------------------C--------------------------CCcCCCccccCcccccCCCCCCccchhhHH
Q 018244          209 -----------------------G--------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFG  239 (359)
Q Consensus       209 -----------------------~--------------------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG  239 (359)
                                             .                          ...+|||.|+|||++.+..|+..+|+||||
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG  375 (550)
T KOG0605|consen  296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG  375 (550)
T ss_pred             hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence                                   0                          024689999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCC---HHHHHH
Q 018244          240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN---PRSLVT  308 (359)
Q Consensus       240 ~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~il~  308 (359)
                      ||+||||.|.+||..+...........-  ...+........+.++.+||.+|+. ||++|..   ++||-+
T Consensus       376 ~ImyEmLvGyPPF~s~tp~~T~rkI~nw--r~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~  444 (550)
T KOG0605|consen  376 CIMYEMLVGYPPFCSETPQETYRKIVNW--RETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK  444 (550)
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHH--hhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence            9999999999999887655443322211  1111112223466899999999999 9999975   555544

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=1.7e-46  Score=346.10  Aligned_cols=253  Identities=21%  Similarity=0.322  Sum_probs=202.5

Q ss_pred             cccccccCCCCCCcEEEEEEe------CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcC-CCcccccccceeeeCC-cc
Q 018244           58 MENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGD-ER  128 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~-~~  128 (359)
                      +|++.+.||.|+||.||+|..      .++..||||++..... .....+.+|+.++..+ +||||+++++++...+ .+
T Consensus         8 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~   87 (338)
T cd05102           8 RLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPL   87 (338)
T ss_pred             HceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCce
Confidence            577888899999999999973      2356799999975432 2345688999999999 8999999999887644 58


Q ss_pred             eEEEecCCCCCHhhhhhcCC------------------------------------------------------------
Q 018244          129 LLVAEYMPNDTLAKHLFHWE------------------------------------------------------------  148 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~------------------------------------------------------------  148 (359)
                      ++||||+++|+|.+++....                                                            
T Consensus        88 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (338)
T cd05102          88 MVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLW  167 (338)
T ss_pred             EEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccc
Confidence            89999999999999986421                                                            


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC------CcCCCccccCcc
Q 018244          149 TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPE  222 (359)
Q Consensus       149 ~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE  222 (359)
                      ...+++..+..++.||+.||+|||++ +++||||||+|||++.++.+||+|||+++......      ...++..|+|||
T Consensus       168 ~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  246 (338)
T cd05102         168 KSPLTMEDLICYSFQVARGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPE  246 (338)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcH
Confidence            13478889999999999999999999 99999999999999999999999999997643221      223457899999


Q ss_pred             cccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCC
Q 018244          223 YLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP  301 (359)
Q Consensus       223 ~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp  301 (359)
                      ++.+..++.++||||||+++|||++ |..||............    .........+...+.++.+|+.+||+.||++||
T Consensus       247 ~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP  322 (338)
T cd05102         247 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQR----LKDGTRMRAPENATPEIYRIMLACWQGDPKERP  322 (338)
T ss_pred             HhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHH----HhcCCCCCCCCCCCHHHHHHHHHHccCChhhCc
Confidence            9998889999999999999999997 88887654322111111    111111223445677899999999999999999


Q ss_pred             CHHHHHHHHHHhhh
Q 018244          302 NPRSLVTALVTLQK  315 (359)
Q Consensus       302 s~~~il~~L~~~~~  315 (359)
                      |+.++++.|+.+..
T Consensus       323 s~~el~~~l~~~~~  336 (338)
T cd05102         323 TFSALVEILGDLLQ  336 (338)
T ss_pred             CHHHHHHHHHHHHh
Confidence            99999999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=4.4e-47  Score=325.70  Aligned_cols=256  Identities=18%  Similarity=0.221  Sum_probs=207.7

Q ss_pred             HHhcCCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCch--HHHHHHHHHHHhcCCCcccccccceeee--C
Q 018244           51 TATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCE--G  125 (359)
Q Consensus        51 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~--~  125 (359)
                      ...+..++|+++.+|++|+||.||+|+ .++++.||+|+++......  --..++||.+|.+++|||||.+..+...  -
T Consensus        70 ~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~  149 (419)
T KOG0663|consen   70 GGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNM  149 (419)
T ss_pred             cCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccc
Confidence            345566788999999999999999999 5578999999998765322  2246899999999999999999887754  3


Q ss_pred             CcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCccc
Q 018244          126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (359)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~  205 (359)
                      +.+|||||||+. +|.+++.. ..+.+...++.-++.|++.|++|||.+ .|+||||||+|+|+.+.|.+||+|||+|+.
T Consensus       150 d~iy~VMe~~Eh-DLksl~d~-m~q~F~~~evK~L~~QlL~glk~lH~~-wilHRDLK~SNLLm~~~G~lKiaDFGLAR~  226 (419)
T KOG0663|consen  150 DKIYIVMEYVEH-DLKSLMET-MKQPFLPGEVKTLMLQLLRGLKHLHDN-WILHRDLKTSNLLLSHKGILKIADFGLARE  226 (419)
T ss_pred             ceeeeeHHHHHh-hHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHhhc-eeEecccchhheeeccCCcEEecccchhhh
Confidence            579999999988 79998865 457899999999999999999999999 999999999999999999999999999998


Q ss_pred             CCCC----CCcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccc---------
Q 018244          206 SRDG----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS---------  271 (359)
Q Consensus       206 ~~~~----~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~---------  271 (359)
                      ....    +..+.|.+|+|||.+.+.+ |+.++|+||+|||+.||+++++.|++...-...+.++..+-.+         
T Consensus       227 ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~  306 (419)
T KOG0663|consen  227 YGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS  306 (419)
T ss_pred             hcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence            7655    3456799999999999865 9999999999999999999999888653222211111111110         


Q ss_pred             ----------------cccCCCChH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          272 ----------------CLEGQFSSD-EGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       272 ----------------~~~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                      .++..+... .++...+|+..+|.+||.+|.|+.+.|++
T Consensus       307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h  361 (419)
T KOG0663|consen  307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH  361 (419)
T ss_pred             ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence                            111112221 45788999999999999999999999875

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-46  Score=349.93  Aligned_cols=239  Identities=19%  Similarity=0.289  Sum_probs=210.0

Q ss_pred             CCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcC-CCcccccccceeeeCCcce
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  129 (359)
                      +..++++++.||+|+||+|+++. ..+++.+|||.+++...   .+.+..+.|.+++... +||.+++++..|++.+++|
T Consensus       366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~  445 (694)
T KOG0694|consen  366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF  445 (694)
T ss_pred             cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence            45677899999999999999999 45688999999997643   3466778888888887 4999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC---
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS---  206 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~---  206 (359)
                      +||||+.||++....   ....+++..+..++..|+.||.|||++ ||||||||.+|||+|.+|.+||+|||+++..   
T Consensus       446 fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~-~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~  521 (694)
T KOG0694|consen  446 FVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHEN-GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ  521 (694)
T ss_pred             EEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhc-CceeeecchhheEEcccCcEEecccccccccCCC
Confidence            999999999844333   557899999999999999999999999 9999999999999999999999999999853   


Q ss_pred             -CCCCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          207 -RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       207 -~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                       ....+..||+.|+|||++.+..|+.++|+|||||+||||+.|+.||+++..+.+.+.+..+      ...+|...+.++
T Consensus       522 g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d------~~~yP~~ls~ea  595 (694)
T KOG0694|consen  522 GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND------EVRYPRFLSKEA  595 (694)
T ss_pred             CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC------CCCCCCcccHHH
Confidence             3445778999999999999999999999999999999999999999988877776665542      234677789999


Q ss_pred             HHHHHHhcccCCCCCCCH
Q 018244          286 VRLASRCLQYEPRERPNP  303 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~  303 (359)
                      .+++.++|.++|++|..+
T Consensus       596 ~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  596 IAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             HHHHHHHhccCcccccCC
Confidence            999999999999999865

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=9.2e-46  Score=332.63  Aligned_cols=245  Identities=16%  Similarity=0.235  Sum_probs=203.3

Q ss_pred             cCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCch---HHHHHHHHHHHhcCCCcccccccceeee----CCcceEEEecCC
Q 018244           64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLVAEYMP  136 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~  136 (359)
                      .+|+|++|.||+|.. +|..||||.+.......   .+.+.+|+.+|++++||||+++++++.+    ....++||||++
T Consensus        27 ~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~  105 (283)
T PHA02988         27 LIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCT  105 (283)
T ss_pred             EEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCC
Confidence            459999999999998 57799999998654333   4567899999999999999999999877    346899999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-CCcCCC
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTN  215 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-~~~~~t  215 (359)
                      +|+|.+++.  ....+++.....++.|++.||.|||+..+++||||||+||++++++.+||+|||+++..... ....++
T Consensus       106 ~g~L~~~l~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~  183 (283)
T PHA02988        106 RGYLREVLD--KEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNF  183 (283)
T ss_pred             CCcHHHHHh--hCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCc
Confidence            999999996  34578999999999999999999998448899999999999999999999999998865433 344678


Q ss_pred             ccccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhc
Q 018244          216 LAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL  293 (359)
Q Consensus       216 ~~y~aPE~~~~--~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  293 (359)
                      ..|+|||++.+  ..++.++||||||+++|||++|..||............    .........+...+..+.+++.+||
T Consensus       184 ~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i----~~~~~~~~~~~~~~~~l~~li~~cl  259 (283)
T PHA02988        184 MVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLI----INKNNSLKLPLDCPLEIKCIVEACT  259 (283)
T ss_pred             ccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHH----HhcCCCCCCCCcCcHHHHHHHHHHh
Confidence            89999999976  67999999999999999999999998765433322221    1111222334456788999999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHhhh
Q 018244          294 QYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       294 ~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      +.||++|||+.++++.|+.++.
T Consensus       260 ~~dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        260 SHDSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             cCCcccCcCHHHHHHHHHHHHh
Confidence            9999999999999999988753

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-46  Score=334.03  Aligned_cols=253  Identities=16%  Similarity=0.165  Sum_probs=207.4

Q ss_pred             CCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCc--------------hHHHHHHHHHHHhcCCCccccccc
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--------------DARQFLEEARAVGQLRNRRLANLL  119 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--------------~~~~~~~e~~~l~~l~h~niv~~~  119 (359)
                      ....|.++++||+|.||.|-+|. ..+++.||||++.+....              ..++..+||.+|+++.|||||+++
T Consensus        95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li  174 (576)
T KOG0585|consen   95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI  174 (576)
T ss_pred             ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence            35678899999999999999998 557899999999753211              245789999999999999999999


Q ss_pred             ceeeeC--CcceEEEecCCCCCHhhhhhcCCCCC-CCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeE
Q 018244          120 GCCCEG--DERLLVAEYMPNDTLAKHLFHWETQP-MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR  196 (359)
Q Consensus       120 ~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~k  196 (359)
                      ++..++  +.+|||+|||..|.+...-   .... +++.+++.|+++++.||.|||.+ |||||||||+|+||+++|.+|
T Consensus       175 EvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Q-giiHRDIKPsNLLl~~~g~VK  250 (576)
T KOG0585|consen  175 EVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQ-GIIHRDIKPSNLLLSSDGTVK  250 (576)
T ss_pred             EeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhc-CeeccccchhheEEcCCCcEE
Confidence            999876  5799999999988765432   3334 99999999999999999999999 999999999999999999999


Q ss_pred             EeccCCcccCCCC---------CCcCCCccccCcccccCCC----CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhh
Q 018244          197 LSCFGLMKNSRDG---------RSYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR  263 (359)
Q Consensus       197 l~DFg~a~~~~~~---------~~~~~t~~y~aPE~~~~~~----~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~  263 (359)
                      |+|||.+..+..+         ....||+.|+|||.+.++.    .+.+.||||+||+||.|+.|+-||.++..-...+.
T Consensus       251 IsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~K  330 (576)
T KOG0585|consen  251 ISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDK  330 (576)
T ss_pred             eeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHH
Confidence            9999998765222         2467999999999998743    35689999999999999999999988765555444


Q ss_pred             hhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          264 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      +....+    ......+..+++++||.+||.+||++|.+..+|..+.-..+.
T Consensus       331 Ivn~pL----~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  331 IVNDPL----EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             HhcCcc----cCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence            443222    222223578899999999999999999999998876554443

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-47  Score=338.63  Aligned_cols=244  Identities=15%  Similarity=0.254  Sum_probs=209.7

Q ss_pred             cccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .|..+..||+|+||.||+|. ...++.||+|++...... ..+.+.+|+.+|..++++||.++++.+..+..++++||||
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~   93 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC   93 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence            45566778999999999998 456889999999976544 3678899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----CCC
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRS  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----~~~  211 (359)
                      .||++.+.++  .+..+.+..+.-++++++.||.|||.. +.+|||||+.|||+..+|.+||+|||.+-....    ...
T Consensus        94 ~gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~-~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~t  170 (467)
T KOG0201|consen   94 GGGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSE-KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKT  170 (467)
T ss_pred             cCcchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhc-ceecccccccceeEeccCcEEEEecceeeeeechhhcccc
Confidence            9999999995  444558999999999999999999999 999999999999999999999999999876543    357


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ++||+-|||||++.+..|+.++||||||++.+||.+|.+|+.....     .....++....++.....+++.+++|+..
T Consensus       171 fvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP-----mrvlflIpk~~PP~L~~~~S~~~kEFV~~  245 (467)
T KOG0201|consen  171 FVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP-----MRVLFLIPKSAPPRLDGDFSPPFKEFVEA  245 (467)
T ss_pred             ccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc-----ceEEEeccCCCCCccccccCHHHHHHHHH
Confidence            7899999999999988999999999999999999999987754322     12222333333444455788899999999


Q ss_pred             hcccCCCCCCCHHHHHHH
Q 018244          292 CLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~  309 (359)
                      ||++||+.||||.+++.+
T Consensus       246 CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  246 CLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             HhhcCcccCcCHHHHhhh
Confidence            999999999999999864

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.2e-46  Score=341.58  Aligned_cols=247  Identities=19%  Similarity=0.200  Sum_probs=221.2

Q ss_pred             CcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCch--HHHHHHHHHHHhcCCCcccccccceeeeCCc-ceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDE-RLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~lv~  132 (359)
                      +.|..++.+|.|+||.++.++ ..+++.+++|.+.......  .....+|+.++++++|||||.+.+.|..++. ++|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            467888999999999999998 4467899999998654333  3467899999999999999999999999888 99999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---  209 (359)
                      +||+||+|.+.+.+.++..++++.+..|+.|++.|+.|||++ +|+|||||+.||+++.++.|+|+|||+|+.....   
T Consensus        84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~-~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~  162 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN-RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL  162 (426)
T ss_pred             eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh-hhhcccchhhhhhccccCceeecchhhhhhcCCchhh
Confidence            999999999999887778899999999999999999999988 9999999999999999999999999999987665   


Q ss_pred             -CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                       .+..||+.|+.||.+.+.+|+.|+|||||||++|||++-+++|.......+...+......     ..+...+.+++.+
T Consensus       163 a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~-----Plp~~ys~el~~l  237 (426)
T KOG0589|consen  163 ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYS-----PLPSMYSSELRSL  237 (426)
T ss_pred             hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCC-----CCCccccHHHHHH
Confidence             3578999999999999999999999999999999999999999888777776666555433     3466788899999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~  309 (359)
                      +..||+++|+.||++.++|.+
T Consensus       238 v~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  238 VKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HHHHhhcCCccCCCHHHHhhC
Confidence            999999999999999999986

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-46  Score=337.22  Aligned_cols=243  Identities=18%  Similarity=0.187  Sum_probs=204.2

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      +|++++.||+|+||.||+|... +++.||+|++.....   ...+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   81 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME   81 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence            5778888999999999999954 688999999975322   234568889999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-CCc
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY  212 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-~~~  212 (359)
                      |+++|+|.+++.  ....+++..+..++.|++.||+|||++ +++||||||+|||++.++.+||+|||++...... ...
T Consensus        82 ~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~  158 (291)
T cd05612          82 YVPGGELFSYLR--NSGRFSNSTGLFYASEIVCALEYLHSK-EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTL  158 (291)
T ss_pred             CCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccc
Confidence            999999999996  445789999999999999999999999 9999999999999999999999999998865443 245


Q ss_pred             CCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHh
Q 018244          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC  292 (359)
Q Consensus       213 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  292 (359)
                      .||+.|+|||++.+..++.++|||||||++|+|++|+.||...............      ...++...+..+.+|+.+|
T Consensus       159 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~  232 (291)
T cd05612         159 CGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG------KLEFPRHLDLYAKDLIKKL  232 (291)
T ss_pred             cCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CcCCCccCCHHHHHHHHHH
Confidence            6899999999999888999999999999999999999998765433222221111      1123445577899999999


Q ss_pred             cccCCCCCCC-----HHHHHHH
Q 018244          293 LQYEPRERPN-----PRSLVTA  309 (359)
Q Consensus       293 l~~dp~~Rps-----~~~il~~  309 (359)
                      |+.||.+||+     +.+++++
T Consensus       233 l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         233 LVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             cCCCHHHccCCccCCHHHHhcC
Confidence            9999999995     7777754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.8e-47  Score=328.31  Aligned_cols=255  Identities=19%  Similarity=0.265  Sum_probs=204.5

Q ss_pred             cccccccCCCCCCcEEEEEE-eCCCcEEEEEEeC--CCCCchHHHHHHHHHHHhcCCCcccccccceeee-----CCcce
Q 018244           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFN--RSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE-----GDERL  129 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~~~  129 (359)
                      .|..++.||.|+||.|.+|. ..+|..||||++.  .......++..+|+++|+.++|+||+.+.+.+..     -+.+|
T Consensus        23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvY  102 (359)
T KOG0660|consen   23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVY  102 (359)
T ss_pred             eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeE
Confidence            34447888999999999998 5678999999998  4455567889999999999999999999998866     34689


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +|+|+|+. +|...++  .++.++...+..+++|++.||.|+|+. +++|||+||+|+|++.+..+||+|||+|+.....
T Consensus       103 iV~elMet-DL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSA-nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~  178 (359)
T KOG0660|consen  103 LVFELMET-DLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSA-NVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF  178 (359)
T ss_pred             EehhHHhh-HHHHHHH--cCccccHHHHHHHHHHHHHhcchhhcc-cccccccchhheeeccCCCEEeccccceeecccc
Confidence            99999954 8999885  445599999999999999999999999 9999999999999999999999999999987531


Q ss_pred             ------CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhh-------------------h
Q 018244          210 ------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-------------------R  263 (359)
Q Consensus       210 ------~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~-------------------~  263 (359)
                            +.++.|.+|.|||++.. ..|+.+.||||.|||+.||++|++.|++...-....                   .
T Consensus       179 ~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~  258 (359)
T KOG0660|consen  179 FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSE  258 (359)
T ss_pred             CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccH
Confidence                  35667999999998875 459999999999999999999999988652111100                   0


Q ss_pred             hhhhhccccc-cCC-----CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHhhhc
Q 018244          264 NIQTLTDSCL-EGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQKD  316 (359)
Q Consensus       264 ~~~~~~~~~~-~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~--L~~~~~~  316 (359)
                      .....+.... .+.     .-+..++.+.+|+.+||..||.+|+|++|+|++  |....+.
T Consensus       259 ~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp  319 (359)
T KOG0660|consen  259 KARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDP  319 (359)
T ss_pred             HHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCC
Confidence            0111111000 000     113567899999999999999999999999986  5555443

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=4.4e-46  Score=341.89  Aligned_cols=246  Identities=15%  Similarity=0.174  Sum_probs=206.1

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .+.+|.+.+.||+|+||.||+|.. .+++.||+|++....   ....+.+.+|+.+++.++||||+++++++...+..++
T Consensus        16 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   95 (329)
T PTZ00263         16 KLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYF   95 (329)
T ss_pred             CchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEE
Confidence            356788999999999999999995 468899999997542   1234568899999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-  209 (359)
                      ||||+.+|+|.+++.  ....+++..+..++.|++.||+|||++ +++||||||+|||++.++.+||+|||++...... 
T Consensus        96 v~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~  172 (329)
T PTZ00263         96 LLEFVVGGELFTHLR--KAGRFPNDVAKFYHAELVLAFEYLHSK-DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT  172 (329)
T ss_pred             EEcCCCCChHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence            999999999999986  445689999999999999999999999 9999999999999999999999999999876443 


Q ss_pred             CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ....||+.|+|||++.+..++.++|||||||++|+|++|..||..............    .  ...++...+..+.+|+
T Consensus       173 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~----~--~~~~p~~~~~~~~~li  246 (329)
T PTZ00263        173 FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILA----G--RLKFPNWFDGRARDLV  246 (329)
T ss_pred             ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhc----C--CcCCCCCCCHHHHHHH
Confidence            345689999999999988899999999999999999999999876533222211111    1  1123344567899999


Q ss_pred             HHhcccCCCCCCC-----HHHHHHH
Q 018244          290 SRCLQYEPRERPN-----PRSLVTA  309 (359)
Q Consensus       290 ~~cl~~dp~~Rps-----~~~il~~  309 (359)
                      .+||+.||.+||+     +++++.+
T Consensus       247 ~~~L~~dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        247 KGLLQTDHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             HHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            9999999999997     6777754

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=5e-46  Score=341.25  Aligned_cols=249  Identities=22%  Similarity=0.360  Sum_probs=206.4

Q ss_pred             cccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      +..+...||+|.||+||+|.|..  .||||+++.....  ..+.|.+|+..+++-+|.||+-+.|+|..+.. .||+.+|
T Consensus       393 ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwC  469 (678)
T KOG0193|consen  393 EVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWC  469 (678)
T ss_pred             Hhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhc
Confidence            34566778999999999999854  4999999876543  36679999999999999999999999988876 9999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC------C
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------G  209 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~------~  209 (359)
                      +|.+|..+++. ....++..+...|++||++|+.|||.+ +|||+|||..||++.+++.|||+|||++.....      .
T Consensus       470 eGsSLY~hlHv-~etkfdm~~~idIAqQiaqGM~YLHAK-~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~  547 (678)
T KOG0193|consen  470 EGSSLYTHLHV-QETKFDMNTTIDIAQQIAQGMDYLHAK-NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQL  547 (678)
T ss_pred             cCchhhhhccc-hhhhhhHHHHHHHHHHHHHhhhhhhhh-hhhhhhccccceEEccCCcEEEecccceeeeeeecccccc
Confidence            99999999975 446799999999999999999999999 999999999999999999999999999865322      1


Q ss_pred             CCcCCCccccCcccccC---CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccccc---CCCChHHHH
Q 018244          210 RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE---GQFSSDEGT  283 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~---~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  283 (359)
                      ....|...|||||+++.   .+|++.+||||||+++|||+||.-|+.....+.+    +..+-...+.   ......++.
T Consensus       548 ~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqI----ifmVGrG~l~pd~s~~~s~~pk  623 (678)
T KOG0193|consen  548 EQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQI----IFMVGRGYLMPDLSKIRSNCPK  623 (678)
T ss_pred             CCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhhe----EEEecccccCccchhhhccCHH
Confidence            23345678999999873   4699999999999999999999988875433322    2222111111   112356778


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      ++++|+..||.+++++||.+.+|+..|+.+..
T Consensus       624 ~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  624 AMKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             HHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence            99999999999999999999999998888766

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=8e-46  Score=333.52  Aligned_cols=248  Identities=17%  Similarity=0.220  Sum_probs=202.6

Q ss_pred             ccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      |+.++.||+|+||.||+|. ..+++.||+|.+.....   .....+.+|++++..++|+||+++++++.+.+..++||||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            4566778999999999998 45789999999875432   2234578899999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---CC
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RS  211 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---~~  211 (359)
                      +++|+|.+++.......+++..+..++.|++.||+|||+. +++||||||+|||+++++.++|+|||++......   ..
T Consensus        82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  160 (285)
T cd05631          82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE-RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRG  160 (285)
T ss_pred             cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecC
Confidence            9999999888654455789999999999999999999999 9999999999999999999999999999875433   23


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ..||..|+|||++.+..++.++|||||||++|+|++|+.||..................  ....++...+.++.+|+.+
T Consensus       161 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~li~~  238 (285)
T cd05631         161 RVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE--DQEEYSEKFSEDAKSICRM  238 (285)
T ss_pred             CCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc--ccccCCccCCHHHHHHHHH
Confidence            46789999999999889999999999999999999999998754321111111111111  1122345567889999999


Q ss_pred             hcccCCCCCCC-----HHHHHHH
Q 018244          292 CLQYEPRERPN-----PRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rps-----~~~il~~  309 (359)
                      ||+.||++||+     +++++++
T Consensus       239 ~l~~~P~~R~~~~~~~~~~~~~h  261 (285)
T cd05631         239 LLTKNPKERLGCRGNGAAGVKQH  261 (285)
T ss_pred             HhhcCHHHhcCCCCCCHHHHhcC
Confidence            99999999997     7777753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=6.1e-46  Score=327.05  Aligned_cols=243  Identities=19%  Similarity=0.195  Sum_probs=207.4

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCch---HHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      ++..+++++.||.|.-|+||++... .+..+|+|++.+.....   ..+...|.++|+.++||.++.++..|+.....|+
T Consensus        75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl  154 (459)
T KOG0610|consen   75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCL  154 (459)
T ss_pred             CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEE
Confidence            5677889999999999999999965 46899999999765443   3356779999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC---
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR---  207 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~---  207 (359)
                      +||||+||+|..+.++..+..+++..++.++.+|+.||+|||-. |||+|||||+||||-++|++.|+||.++....   
T Consensus       155 ~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml-GivYRDLKPENILvredGHIMLsDFDLS~~~~~~P  233 (459)
T KOG0610|consen  155 VMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML-GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP  233 (459)
T ss_pred             EEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh-ceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence            99999999999999888888999999999999999999999999 99999999999999999999999999853110   


Q ss_pred             ---------------------------------C------------------------CCCcCCCccccCcccccCCCCC
Q 018244          208 ---------------------------------D------------------------GRSYSTNLAFTPPEYLRTGRVT  230 (359)
Q Consensus       208 ---------------------------------~------------------------~~~~~~t~~y~aPE~~~~~~~~  230 (359)
                                                       .                        ....+||..|.|||++.+...+
T Consensus       234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg  313 (459)
T KOG0610|consen  234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG  313 (459)
T ss_pred             eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence                                             0                        0124678899999999999999


Q ss_pred             CccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCC
Q 018244          231 PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN  302 (359)
Q Consensus       231 ~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps  302 (359)
                      .++|+|+||+++|||+.|..||.+...+....+.+.    ..+.-......+..+++||+++|.+||.+|..
T Consensus       314 sAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~----~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg  381 (459)
T KOG0610|consen  314 SAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVG----QPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLG  381 (459)
T ss_pred             chhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhc----CCCcCCCCCcchhHHHHHHHHHhccChhhhhc
Confidence            999999999999999999999988765544333322    22222223367789999999999999999987

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=5.5e-46  Score=340.42  Aligned_cols=237  Identities=18%  Similarity=0.225  Sum_probs=200.1

Q ss_pred             cCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCC
Q 018244           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs  139 (359)
                      .||+|+||.||+|.. .+|+.||+|++....   ......+.+|+.+++.++||||+++++++...+..++||||+.+|+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~   81 (323)
T cd05571           2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE   81 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence            479999999999984 578899999997542   2234567889999999999999999999999999999999999999


Q ss_pred             HhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----CCCcCCC
Q 018244          140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYSTN  215 (359)
Q Consensus       140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----~~~~~~t  215 (359)
                      |.+++.  ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....    .....||
T Consensus        82 L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~-~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt  158 (323)
T cd05571          82 LFFHLS--RERVFSEDRARFYGAEIVSALGYLHSC-DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT  158 (323)
T ss_pred             HHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecC
Confidence            999886  445789999999999999999999999 999999999999999999999999999875322    1234689


Q ss_pred             ccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhccc
Q 018244          216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY  295 (359)
Q Consensus       216 ~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  295 (359)
                      +.|+|||++.+..++.++|||||||++|||++|..||...............      ...++...+.++.+|+.+||+.
T Consensus       159 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~~  232 (323)
T cd05571         159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLSPEAKSLLAGLLKK  232 (323)
T ss_pred             ccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHccC
Confidence            9999999999889999999999999999999999998765443332222111      1234456678899999999999


Q ss_pred             CCCCCC-----CHHHHHHH
Q 018244          296 EPRERP-----NPRSLVTA  309 (359)
Q Consensus       296 dp~~Rp-----s~~~il~~  309 (359)
                      ||++||     ++.+++++
T Consensus       233 dP~~R~~~~~~~~~~ll~h  251 (323)
T cd05571         233 DPKQRLGGGPEDAKEIMEH  251 (323)
T ss_pred             CHHHcCCCCCCCHHHHHcC
Confidence            999999     79998864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.5e-46  Score=343.36  Aligned_cols=244  Identities=18%  Similarity=0.234  Sum_probs=214.4

Q ss_pred             CcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ..|++-+.||.|+-|.|-.|+ ..+|+.+|||++.+..   ......+.+|+-+|+.+.|||++++++++.+..++|+|.
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            457778889999999999999 5689999999998652   122345789999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC--
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--  210 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~--  210 (359)
                      ||+++|.|++++.  .++.+++..+.+++.||+.|+.|+|.. +|+|||+||+|+|+|..+++||+|||+|....++.  
T Consensus        92 Eyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~-~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklL  168 (786)
T KOG0588|consen   92 EYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAF-NICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLL  168 (786)
T ss_pred             EecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhh-cceeccCCchhhhhhcccCEeeeccceeecccCCccc
Confidence            9999999999997  677899999999999999999999999 99999999999999999999999999998877664  


Q ss_pred             -CcCCCccccCcccccCCCCC-CccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          211 -SYSTNLAFTPPEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       211 -~~~~t~~y~aPE~~~~~~~~-~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                       +.+|.+.|.|||++.+.+|. .++||||.|||||.||||+-||.++....+........      ...|...+.++.+|
T Consensus       169 eTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~------f~MPs~Is~eaQdL  242 (786)
T KOG0588|consen  169 ETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGV------FEMPSNISSEAQDL  242 (786)
T ss_pred             cccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCc------ccCCCcCCHHHHHH
Confidence             67899999999999999986 58999999999999999999999776554433322211      12457788999999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+|+..||++|.|+++|+.+
T Consensus       243 Lr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  243 LRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             HHHHhccCccccccHHHHhhC
Confidence            999999999999999999987

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=4.9e-45  Score=335.29  Aligned_cols=251  Identities=18%  Similarity=0.226  Sum_probs=204.2

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .+|++++.||+|+||.||++.. .++..+|+|.+...... ..+.+.+|+++|+.++||||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (331)
T cd06649           5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   84 (331)
T ss_pred             ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence            5678899999999999999995 46889999999765322 245689999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--CCc
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSY  212 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--~~~  212 (359)
                      +++|+|.+++.  ....+++..+..++.|++.||.|||+..+++|+||||+|||++.++.++|+|||++......  ...
T Consensus        85 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  162 (331)
T cd06649          85 MDGGSLDQVLK--EAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF  162 (331)
T ss_pred             CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccC
Confidence            99999999986  34568999999999999999999998636999999999999999999999999998765432  345


Q ss_pred             CCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh--------------------------
Q 018244          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ--------------------------  266 (359)
Q Consensus       213 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~--------------------------  266 (359)
                      .+|..|+|||++.+..++.++||||||+++|+|++|+.||..............                          
T Consensus       163 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (331)
T cd06649         163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSG  242 (331)
T ss_pred             CCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccc
Confidence            688999999999988899999999999999999999999864332221110000                          


Q ss_pred             ----------------hhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          267 ----------------TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       267 ----------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                      .+.............+.++.+|+.+||+.||++|||+.+++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h  301 (331)
T cd06649         243 HGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH  301 (331)
T ss_pred             cccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence                            0000000000112356789999999999999999999999976

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.8e-46  Score=326.53  Aligned_cols=243  Identities=17%  Similarity=0.236  Sum_probs=212.7

Q ss_pred             CcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCch---HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ..|++.+.||+|.||.|-+|. ...|..||||.+.++...+   .-.+.+||++|..|+||||+.++++|...+...|||
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            468899999999999999998 5789999999998875544   345789999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC--
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--  210 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~--  210 (359)
                      ||..+|.|.+|+.  +.+.+++....++++||..|+.|+|.+ +++|||||.+|||+|.++++||+|||++..+...+  
T Consensus       133 EYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHkn-rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfL  209 (668)
T KOG0611|consen  133 EYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKN-RVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFL  209 (668)
T ss_pred             EecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhc-cceecccchhheeecCCCCeeeeccchhhhhccccHH
Confidence            9999999999998  567899999999999999999999999 99999999999999999999999999998877664  


Q ss_pred             -CcCCCccccCcccccCCCCC-CccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          211 -SYSTNLAFTPPEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       211 -~~~~t~~y~aPE~~~~~~~~-~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                       +++|++-|.+||++.+.+|. +.+|-||||++||-|+.|..||.+.....+..++.....       ..+..+.++.-|
T Consensus       210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaY-------rEP~~PSdA~gL  282 (668)
T KOG0611|consen  210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAY-------REPETPSDASGL  282 (668)
T ss_pred             HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccc-------cCCCCCchHHHH
Confidence             67899999999999999875 579999999999999999999988765544333222111       123344578899


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~  309 (359)
                      |.+||..||++|.|+.+|..+
T Consensus       283 IRwmLmVNP~RRATieDiAsH  303 (668)
T KOG0611|consen  283 IRWMLMVNPERRATIEDIASH  303 (668)
T ss_pred             HHHHHhcCcccchhHHHHhhh
Confidence            999999999999999999875

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=3.2e-46  Score=355.88  Aligned_cols=255  Identities=25%  Similarity=0.353  Sum_probs=214.0

Q ss_pred             cccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      +....++||+|+||.||+|...      +...||||.++..... ...+|++|+++|..++|||||+++|+|..++.+++
T Consensus       487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M  566 (774)
T KOG1026|consen  487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM  566 (774)
T ss_pred             heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE
Confidence            3456788999999999999842      3568999999987665 56789999999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcC--------CCCC----CCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEe
Q 018244          131 VAEYMPNDTLAKHLFHW--------ETQP----MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLS  198 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~--------~~~~----l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~  198 (359)
                      |+|||..|+|.++|+.+        .+..    ++..+.+.|+.|||.|+.||-++ .+|||||-..|+||.++..|||+
T Consensus       567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~-~FVHRDLATRNCLVge~l~VKIs  645 (774)
T KOG1026|consen  567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH-HFVHRDLATRNCLVGENLVVKIS  645 (774)
T ss_pred             EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-cccccchhhhhceeccceEEEec
Confidence            99999999999999753        1223    88999999999999999999999 99999999999999999999999


Q ss_pred             ccCCcccCCCCCCc------CCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccc
Q 018244          199 CFGLMKNSRDGRSY------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDS  271 (359)
Q Consensus       199 DFg~a~~~~~~~~~------~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~  271 (359)
                      |||+++......-+      .-..+|||||.+..++|+.++|||||||+|||++| |+.|+.+...+...+....    .
T Consensus       646 DfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~----g  721 (774)
T KOG1026|consen  646 DFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRA----G  721 (774)
T ss_pred             ccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHc----C
Confidence            99999876543322      22468999999999999999999999999999998 5556555444333322222    1


Q ss_pred             cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       272 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      .+ -..|..++.++.+||..||+.+|.+||+++||-..|+..-...+
T Consensus       722 ~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~  767 (774)
T KOG1026|consen  722 QL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP  767 (774)
T ss_pred             Cc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence            12 34577889999999999999999999999999999998765443

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7.9e-46  Score=304.63  Aligned_cols=245  Identities=21%  Similarity=0.255  Sum_probs=213.5

Q ss_pred             cccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCc---hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ++++-+.||.|-||.||.|+ .+++..||+|++.+++..   -..++.+|+++-..|+||||++++++|.+....||++|
T Consensus        23 dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilE  102 (281)
T KOG0580|consen   23 DFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILE  102 (281)
T ss_pred             hccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEE
Confidence            44566777999999999999 667889999999865422   24578999999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC--CCCC
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRS  211 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~--~~~~  211 (359)
                      |..+|+|...|.......+++...+.++.|+|.||.|+|.+ +++||||||+|+|++..+.+|++|||.+-...  ....
T Consensus       103 ya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k-~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~t  181 (281)
T KOG0580|consen  103 YAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKT  181 (281)
T ss_pred             ecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC-CcccCCCCHHHhccCCCCCeeccCCCceeecCCCCcee
Confidence            99999999999876677899999999999999999999999 99999999999999999999999999876654  3356


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      .+||..|.|||...+..++..+|+|++|++.||++.|.+||.....+........      ....+|...+.++.++|.+
T Consensus       182 lcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k------~~~~~p~~is~~a~dlI~~  255 (281)
T KOG0580|consen  182 LCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRK------VDLKFPSTISGGAADLISR  255 (281)
T ss_pred             eecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHH------ccccCCcccChhHHHHHHH
Confidence            7899999999999999999999999999999999999999987664443333222      1233557788899999999


Q ss_pred             hcccCCCCCCCHHHHHHH
Q 018244          292 CLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~  309 (359)
                      |+.++|.+|.+..+++++
T Consensus       256 ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  256 LLVKNPIERLALTEVMDH  273 (281)
T ss_pred             HhccCccccccHHHHhhh
Confidence            999999999999999875

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=2.2e-45  Score=338.26  Aligned_cols=246  Identities=17%  Similarity=0.199  Sum_probs=205.6

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeC-C-CcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLE-N-QFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      .+.+|.+++.||+|+||.||+|... . +..||+|.+....   ....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus        28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~  107 (340)
T PTZ00426         28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY  107 (340)
T ss_pred             ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence            4557888999999999999999843 3 3689999986432   223456888999999999999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +||||+.+|+|.+++.  ....+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++......
T Consensus       108 lv~Ey~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~  184 (340)
T PTZ00426        108 LVLEFVIGGEFFTFLR--RNKRFPNDVGCFYAAQIVLIFEYLQSL-NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR  184 (340)
T ss_pred             EEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence            9999999999999996  345689999999999999999999999 9999999999999999999999999999875433


Q ss_pred             -CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                       ....||+.|+|||++.+..++.++|||||||++|+|++|..||................      ..++...+..+.++
T Consensus       185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~------~~~p~~~~~~~~~l  258 (340)
T PTZ00426        185 TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGI------IYFPKFLDNNCKHL  258 (340)
T ss_pred             cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCC------CCCCCCCCHHHHHH
Confidence             34568999999999998889999999999999999999999987654332222221111      12345566789999


Q ss_pred             HHHhcccCCCCCC-----CHHHHHHH
Q 018244          289 ASRCLQYEPRERP-----NPRSLVTA  309 (359)
Q Consensus       289 i~~cl~~dp~~Rp-----s~~~il~~  309 (359)
                      +.+||+.||++|+     |+++++++
T Consensus       259 i~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        259 MKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             HHHHcccCHHHcCCCCCCCHHHHHcC
Confidence            9999999999995     88888765

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-45  Score=333.98  Aligned_cols=236  Identities=18%  Similarity=0.203  Sum_probs=197.2

Q ss_pred             CCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCH
Q 018244           65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (359)
Q Consensus        65 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL  140 (359)
                      ||+|+||.||+|.. .++..||+|.+....   ......+.+|+.++..++||||+++++++...+..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            59999999999995 468899999987532   23345678899999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CCcCCCc
Q 018244          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNL  216 (359)
Q Consensus       141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~~~~t~  216 (359)
                      .+++.  ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.++|+|||+++.....    ....||+
T Consensus        81 ~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  157 (312)
T cd05585          81 FHHLQ--REGRFDLSRARFYTAELLCALENLHKF-NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP  157 (312)
T ss_pred             HHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence            99986  345689999999999999999999999 9999999999999999999999999998754222    2346899


Q ss_pred             cccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccC
Q 018244          217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE  296 (359)
Q Consensus       217 ~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  296 (359)
                      .|+|||++.+..++.++|||||||++|+|++|..||...............      ...++...+.++.+++.+||+.|
T Consensus       158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~L~~d  231 (312)
T cd05585         158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE------PLRFPDGFDRDAKDLLIGLLSRD  231 (312)
T ss_pred             ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC------CCCCCCcCCHHHHHHHHHHcCCC
Confidence            999999999888999999999999999999999998765443332222111      12234556788999999999999


Q ss_pred             CCCCCC---HHHHHHH
Q 018244          297 PRERPN---PRSLVTA  309 (359)
Q Consensus       297 p~~Rps---~~~il~~  309 (359)
                      |++||+   +.+++.+
T Consensus       232 p~~R~~~~~~~e~l~h  247 (312)
T cd05585         232 PTRRLGYNGAQEIKNH  247 (312)
T ss_pred             HHHcCCCCCHHHHHcC
Confidence            999985   5565543

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=1.5e-44  Score=328.17  Aligned_cols=254  Identities=21%  Similarity=0.295  Sum_probs=199.3

Q ss_pred             CcccccccCCCCCCcEEEEEEeCC-----------------CcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLEN-----------------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANL  118 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~  118 (359)
                      .+|.+.+.||+|+||.||+|.+.+                 +..||+|.+...... ....+.+|++++..++||||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            367788889999999999997532                 346999999865333 34568999999999999999999


Q ss_pred             cceeeeCCcceEEEecCCCCCHhhhhhcCC-----------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 018244          119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE-----------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHD  181 (359)
Q Consensus       119 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~D  181 (359)
                      ++++...+..++||||+.+|+|.+++....                 ...+++..+..++.||+.||.|||+. +++|+|
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~ivH~d  163 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL-NFVHRD  163 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC-CccccC
Confidence            999999999999999999999999885421                 12468889999999999999999999 999999


Q ss_pred             CCCCCeeeCCCCCeEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhC--CCCCC
Q 018244          182 LNAYRIVFDDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG--KHIPP  253 (359)
Q Consensus       182 ikp~NIll~~~~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg--~~p~~  253 (359)
                      |||+|||++.++.+||+|||+++......      ...++..|+|||++.++.++.++||||||+++|+|+++  ..|+.
T Consensus       164 lkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~  243 (304)
T cd05096         164 LATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYG  243 (304)
T ss_pred             cchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCC
Confidence            99999999999999999999987653322      22346789999999888899999999999999999875  34444


Q ss_pred             cchhHHHhhhhhhhhcc--ccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 018244          254 SHALDLIRDRNIQTLTD--SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       254 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~  311 (359)
                      .................  .......+..++..+.+|+.+||+.||++|||+.+|.+.|+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         244 ELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             cCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            32222211111110000  01111123455678999999999999999999999988875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=1.5e-44  Score=321.99  Aligned_cols=251  Identities=19%  Similarity=0.269  Sum_probs=205.0

Q ss_pred             CCcccccccCCCCCCcEEEEEEeC----CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      ...|++.+.||+|+||.||+|.+.    .+..||+|.++..... ....+.+|+..++.++||||+++++++..++..++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            346778888999999999999743    3668999999865332 24568899999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      ||||+++|+|.+++.. ....+++..++.++.|++.||+|||+. +++||||||+||+++.++.++++|||.+.......
T Consensus        84 v~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~i~~al~~lH~~-~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~  161 (266)
T cd05064          84 VTEYMSNGALDSFLRK-HEGQLVAGQLMGMLPGLASGMKYLSEM-GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA  161 (266)
T ss_pred             EEEeCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence            9999999999999864 345789999999999999999999999 99999999999999999999999999876543221


Q ss_pred             -----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHH
Q 018244          211 -----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE  284 (359)
Q Consensus       211 -----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (359)
                           ...++..|+|||.+.+..++.++||||||+++||+++ |..||.............     .......+...+..
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  236 (266)
T cd05064         162 IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVE-----DGFRLPAPRNCPNL  236 (266)
T ss_pred             hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHH-----CCCCCCCCCCCCHH
Confidence                 1234568999999998899999999999999999775 888876543322221111     11112234556778


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          285 LVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       285 l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      +.+++.+||+.+|++|||+.++++.|.++
T Consensus       237 ~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         237 LHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            99999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.5e-45  Score=335.88  Aligned_cols=249  Identities=17%  Similarity=0.159  Sum_probs=205.8

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      .|.+++.||+|+||.||+|... ++..||+|++....   ......+.+|++++..++||||+++++++...+..++|||
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   81 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME   81 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence            5778889999999999999954 58899999997542   2234568889999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC-CCCc
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-GRSY  212 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~-~~~~  212 (359)
                      |+++|+|.+++.  ....+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++..... ....
T Consensus        82 ~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~  158 (333)
T cd05600          82 YVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHEL-GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSV  158 (333)
T ss_pred             CCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCc
Confidence            999999999996  445789999999999999999999999 999999999999999999999999999886544 2345


Q ss_pred             CCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh--hhccccccCCCChHHHHHHHHHHH
Q 018244          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ--TLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       213 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      .||+.|+|||++.+..++.++|||||||++|+|++|..||..............  ...............+.++.+++.
T Consensus       159 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~  238 (333)
T cd05600         159 VGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLIT  238 (333)
T ss_pred             ccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHH
Confidence            689999999999988999999999999999999999999876543332211111  000000000001245778999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~  309 (359)
                      +||..+|++|||+.+++++
T Consensus       239 ~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         239 KLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             HHhhChhhhcCCHHHHHhC
Confidence            9999999999999999975

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=1.5e-44  Score=320.79  Aligned_cols=250  Identities=22%  Similarity=0.369  Sum_probs=211.4

Q ss_pred             cccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCC
Q 018244           58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  137 (359)
                      +|.+++.||.|+||.||+|...++..+|+|.+..........+.+|+++++.++|+||+++++++......++||||+++
T Consensus         7 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   86 (261)
T cd05148           7 EFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEK   86 (261)
T ss_pred             HHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeeccc
Confidence            57788889999999999999877889999999877655567889999999999999999999999999999999999999


Q ss_pred             CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----CcC
Q 018244          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----SYS  213 (359)
Q Consensus       138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----~~~  213 (359)
                      ++|.+++.......+++..+..++.|++.||.|||++ +++|+||||+||++++++.+||+|||.+.......    ...
T Consensus        87 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~  165 (261)
T cd05148          87 GSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKK  165 (261)
T ss_pred             CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCC
Confidence            9999999765566789999999999999999999999 99999999999999999999999999987654332    223


Q ss_pred             CCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHh
Q 018244          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC  292 (359)
Q Consensus       214 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  292 (359)
                      ++..|+|||.+.+..++.++||||||+++|+|++ |..|+.............     .......+...+..+.+++.+|
T Consensus       166 ~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~  240 (261)
T cd05148         166 IPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT-----AGYRMPCPAKCPQEIYKIMLEC  240 (261)
T ss_pred             CceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH-----hCCcCCCCCCCCHHHHHHHHHH
Confidence            4568999999988889999999999999999998 777775543222221111     1112223455678899999999


Q ss_pred             cccCCCCCCCHHHHHHHHHHh
Q 018244          293 LQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       293 l~~dp~~Rps~~~il~~L~~~  313 (359)
                      |+.||++|||+.++++.|+.+
T Consensus       241 l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         241 WAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             cCCCchhCcCHHHHHHHHhcC
Confidence            999999999999999999753

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=5.2e-45  Score=334.53  Aligned_cols=237  Identities=18%  Similarity=0.233  Sum_probs=199.2

Q ss_pred             cCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCC
Q 018244           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs  139 (359)
                      .||+|+||.||++.. .++..||+|++....   ......+.+|+++++.++||||+++++++...+..++||||+++|+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~   81 (328)
T cd05593           2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE   81 (328)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence            469999999999984 568899999997542   2234567889999999999999999999999999999999999999


Q ss_pred             HhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CCcCCC
Q 018244          140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTN  215 (359)
Q Consensus       140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~~~~t  215 (359)
                      |.+++.  ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....    ....||
T Consensus        82 L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt  158 (328)
T cd05593          82 LFFHLS--RERVFSEDRTRFYGAEIVSALDYLHSG-KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT  158 (328)
T ss_pred             HHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCC
Confidence            998886  445789999999999999999999999 9999999999999999999999999998753221    234689


Q ss_pred             ccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhccc
Q 018244          216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY  295 (359)
Q Consensus       216 ~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  295 (359)
                      +.|+|||++.+..++.++|||||||++|+|++|+.||..............      ....++...+.++.+|+.+||+.
T Consensus       159 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~------~~~~~p~~~~~~~~~li~~~L~~  232 (328)
T cd05593         159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM------EDIKFPRTLSADAKSLLSGLLIK  232 (328)
T ss_pred             cCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc------CCccCCCCCCHHHHHHHHHHcCC
Confidence            999999999988899999999999999999999999876543332221111      11123455678899999999999


Q ss_pred             CCCCCC-----CHHHHHHH
Q 018244          296 EPRERP-----NPRSLVTA  309 (359)
Q Consensus       296 dp~~Rp-----s~~~il~~  309 (359)
                      ||++|+     ++.+++++
T Consensus       233 dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         233 DPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             CHHHcCCCCCCCHHHHhcC
Confidence            999997     89998865

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=1.7e-44  Score=320.53  Aligned_cols=251  Identities=22%  Similarity=0.318  Sum_probs=209.2

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      ..+|+++++||+|++|.||+|...++..||+|.+.... ...+.+.+|+.+++.++|+||+++++++...+..+++|||+
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM   83 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence            35678999999999999999998778889999987543 23567899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----  210 (359)
                      ++++|.+++.......+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.......     
T Consensus        84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~  162 (261)
T cd05072          84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK-NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE  162 (261)
T ss_pred             CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEecCCCcEEECCCccceecCCCceeccC
Confidence            999999999765556789999999999999999999999 99999999999999999999999999998765432     


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ...++..|+|||.+.+..++.++||||||+++|+|+| |..||...............     .........+.++.+++
T Consensus       163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li  237 (261)
T cd05072         163 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG-----YRMPRMENCPDELYDIM  237 (261)
T ss_pred             CCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHH
Confidence            2234567999999998889999999999999999998 88777654332222221111     11112234567899999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHh
Q 018244          290 SRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      .+||..+|++|||++++++.|+.+
T Consensus       238 ~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         238 KTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             HHHccCCcccCcCHHHHHHHHhcC
Confidence            999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=6.1e-46  Score=337.77  Aligned_cols=245  Identities=21%  Similarity=0.325  Sum_probs=209.3

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      |....-++-||.|+-|.||.|++.+. .||||+++.-.       ..+|+-|++|+|+||+.+.|+|.....+|||||||
T Consensus       123 Fe~IsELeWlGSGaQGAVF~Grl~ne-tVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfC  194 (904)
T KOG4721|consen  123 FEEISELEWLGSGAQGAVFLGRLHNE-TVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFC  194 (904)
T ss_pred             HHHhhhhhhhccCcccceeeeeccCc-eehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeecc
Confidence            33334456679999999999998654 69999886422       34789999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---CCc
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSY  212 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---~~~  212 (359)
                      ..|.|...|+  .++.++......|..+||.|+.|||.+ .|||||||.-||||..+..|||+|||.++...+.   -.+
T Consensus       195 a~GqL~~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~h-KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSF  271 (904)
T KOG4721|consen  195 AQGQLYEVLK--AGRPITPSLLVDWSKGIAGGMNYLHLH-KIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSF  271 (904)
T ss_pred             ccccHHHHHh--ccCccCHHHHHHHHHHhhhhhHHHHHh-hHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhh
Confidence            9999999997  677899999999999999999999999 9999999999999999999999999998876544   356


Q ss_pred             CCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHh
Q 018244          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC  292 (359)
Q Consensus       213 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  292 (359)
                      .||..|||||++...+.++|+|||||||||||||||..|+.+-...    .++..+-...+....|..+++.++-|+++|
T Consensus       272 aGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss----AIIwGVGsNsL~LpvPstcP~GfklL~Kqc  347 (904)
T KOG4721|consen  272 AGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS----AIIWGVGSNSLHLPVPSTCPDGFKLLLKQC  347 (904)
T ss_pred             hhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh----eeEEeccCCcccccCcccCchHHHHHHHHH
Confidence            8999999999999999999999999999999999999887644322    223333333344455678889999999999


Q ss_pred             cccCCCCCCCHHHHHHHHHHhhh
Q 018244          293 LQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       293 l~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      |+..|..||++.+|+.+|.-...
T Consensus       348 w~sKpRNRPSFrqil~HldIa~p  370 (904)
T KOG4721|consen  348 WNSKPRNRPSFRQILLHLDIASP  370 (904)
T ss_pred             HhcCCCCCccHHHHHHHHhhcCH
Confidence            99999999999999999886543

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=1.2e-44  Score=337.88  Aligned_cols=251  Identities=21%  Similarity=0.309  Sum_probs=201.2

Q ss_pred             cccccccCCCCCCcEEEEEEe------CCCcEEEEEEeCCCC-CchHHHHHHHHHHHhcC-CCcccccccceeeeCCcce
Q 018244           58 MENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  129 (359)
                      +|++.+.||+|+||.||+|++      .++..||||++.... ....+.+.+|+++|..+ +||||+++++++...+..+
T Consensus        36 ~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~  115 (375)
T cd05104          36 RLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTL  115 (375)
T ss_pred             HeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcce
Confidence            567788899999999999973      235689999997543 23345688999999999 8999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCC-------------------------------------------------------------
Q 018244          130 LVAEYMPNDTLAKHLFHWE-------------------------------------------------------------  148 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~-------------------------------------------------------------  148 (359)
                      +||||+++|+|.+++....                                                             
T Consensus       116 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (375)
T cd05104         116 VITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYI  195 (375)
T ss_pred             eeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceec
Confidence            9999999999999986421                                                             


Q ss_pred             ------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCC-----
Q 018244          149 ------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-----  211 (359)
Q Consensus       149 ------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~-----  211 (359)
                                  ...+++..+..++.||+.||.|||++ +++||||||+|||+++++.+||+|||+++.......     
T Consensus       196 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~  274 (375)
T cd05104         196 DQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK-NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKG  274 (375)
T ss_pred             ccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCchhhEEEECCCcEEEecCccceeccCcccccccC
Confidence                        12478899999999999999999999 999999999999999999999999999876543321     


Q ss_pred             -cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          212 -YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       212 -~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                       ..++..|+|||.+.+..++.++||||||+++|+|++ |..||..........    ...........+...+.++.+|+
T Consensus       275 ~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li  350 (375)
T cd05104         275 NARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFY----KMIKEGYRMLSPECAPSEMYDIM  350 (375)
T ss_pred             CCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHH----HHHHhCccCCCCCCCCHHHHHHH
Confidence             223467999999998899999999999999999998 776665432221111    11111111112233457899999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHh
Q 018244          290 SRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      .+||+.||++|||+.++++.|++.
T Consensus       351 ~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         351 KSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             HHHccCChhHCcCHHHHHHHHHhh
Confidence            999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=5.6e-45  Score=333.72  Aligned_cols=237  Identities=18%  Similarity=0.239  Sum_probs=198.2

Q ss_pred             cCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCC
Q 018244           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs  139 (359)
                      .||+|+||.||++.. .+|..||+|++....   ......+.+|+++++.++||||+++++++...+..++||||+++|+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~   81 (323)
T cd05595           2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE   81 (323)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence            479999999999984 568899999997542   2234567789999999999999999999999999999999999999


Q ss_pred             HhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CCcCCC
Q 018244          140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTN  215 (359)
Q Consensus       140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~~~~t  215 (359)
                      |..++.  ....+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||++......    ....||
T Consensus        82 L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt  158 (323)
T cd05595          82 LFFHLS--RERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT  158 (323)
T ss_pred             HHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCC
Confidence            998886  445789999999999999999999999 9999999999999999999999999998753221    234688


Q ss_pred             ccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhccc
Q 018244          216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY  295 (359)
Q Consensus       216 ~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  295 (359)
                      +.|+|||++.+..++.++|||||||++|+|++|+.||..............    .  ...++...++++.+++.+||+.
T Consensus       159 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~----~--~~~~p~~~~~~~~~li~~~L~~  232 (323)
T cd05595         159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM----E--EIRFPRTLSPEAKSLLAGLLKK  232 (323)
T ss_pred             cCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhc----C--CCCCCCCCCHHHHHHHHHHccC
Confidence            999999999988999999999999999999999998865543322222111    1  1123455678899999999999


Q ss_pred             CCCCCC-----CHHHHHHH
Q 018244          296 EPRERP-----NPRSLVTA  309 (359)
Q Consensus       296 dp~~Rp-----s~~~il~~  309 (359)
                      ||++||     ++.+++++
T Consensus       233 dP~~R~~~~~~~~~~~l~h  251 (323)
T cd05595         233 DPKQRLGGGPSDAKEVMEH  251 (323)
T ss_pred             CHHHhCCCCCCCHHHHHcC
Confidence            999998     88888764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-45  Score=302.08  Aligned_cols=255  Identities=19%  Similarity=0.196  Sum_probs=210.1

Q ss_pred             CCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCC-----cc
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ER  128 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~  128 (359)
                      |-++|++.+.||.|||+.||.++ ..++..+|+|++..+...+.+..++|++..++++|||+++++++.....     ..
T Consensus        19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~   98 (302)
T KOG2345|consen   19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA   98 (302)
T ss_pred             cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence            44689999999999999999999 7788999999999888788889999999999999999999999886554     48


Q ss_pred             eEEEecCCCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          129 LLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~--ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                      ||++.|...|||.+.+...  ++..+++.+++.|+.+|++||.+||.. .  ..||||||.|||+.+.+.++|.|||.+.
T Consensus        99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~  177 (302)
T KOG2345|consen   99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSAT  177 (302)
T ss_pred             EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcc
Confidence            9999999999999999754  456899999999999999999999998 6  9999999999999999999999999987


Q ss_pred             cCCCC---C----------CcCCCccccCcccccC---CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh-h
Q 018244          205 NSRDG---R----------SYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-T  267 (359)
Q Consensus       205 ~~~~~---~----------~~~~t~~y~aPE~~~~---~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~-~  267 (359)
                      ...-.   +          ...-|..|+|||.+.-   ...++++|||||||+||.|+.|..||.....   ..+.+. .
T Consensus       178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~---~GgSlaLA  254 (302)
T KOG2345|consen  178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ---QGGSLALA  254 (302)
T ss_pred             ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh---cCCeEEEe
Confidence            54321   1          1234789999999873   4578999999999999999999998853311   111111 1


Q ss_pred             hccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       268 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      +......-......++.+.+++++|++.||.+||++.+++..+..+
T Consensus       255 v~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  255 VQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             eeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence            1111111111234788999999999999999999999999988765

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=1.3e-44  Score=325.85  Aligned_cols=249  Identities=18%  Similarity=0.212  Sum_probs=198.9

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      +|.+++.||+|+||+||+|... ++..+|+|++.....  ...+.+.+|+++++.++||||+++++++...+..++||||
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY   81 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence            5778888999999999999964 678899999875432  2245678999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-----
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----  209 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-----  209 (359)
                      ++++.+..+..  ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++......     
T Consensus        82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  158 (287)
T cd07848          82 VEKNMLELLEE--MPNGVPPEKVRSYIYQLIKAIHWCHKN-DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY  158 (287)
T ss_pred             CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence            99876665443  345689999999999999999999999 9999999999999999999999999998865432     


Q ss_pred             CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh--------------------hhc
Q 018244          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ--------------------TLT  269 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~--------------------~~~  269 (359)
                      ....+++.|+|||++.+..++.++|||||||++|+|++|+.||+.............                    ...
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (287)
T cd07848         159 TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLR  238 (287)
T ss_pred             cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccc
Confidence            234578999999999988899999999999999999999998875432111000000                    000


Q ss_pred             ccccc------CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          270 DSCLE------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       270 ~~~~~------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+...      .......+.++.+|+.+||+.||++|||+++++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h  284 (287)
T cd07848         239 FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH  284 (287)
T ss_pred             cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            00000      00112256789999999999999999999998863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=2.7e-44  Score=323.02  Aligned_cols=250  Identities=24%  Similarity=0.371  Sum_probs=205.8

Q ss_pred             CcccccccCCCCCCcEEEEEEeCC------CcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      .++++++.||+|+||.||+|....      ...||+|.+...... ....+.+|++++..++||||+++++++......+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            467888999999999999998532      257999998755432 2456889999999999999999999999888999


Q ss_pred             EEEecCCCCCHhhhhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCe
Q 018244          130 LVAEYMPNDTLAKHLFHWET--------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP  195 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~  195 (359)
                      ++|||+++++|.+++.....              ..+++..+..++.|++.||.|||++ +++|+||||+||++++++.+
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~-~i~H~dlkp~Nil~~~~~~~  163 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH-HFVHRDLAARNCLVGEGLTV  163 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccccceEEEcCCCcE
Confidence            99999999999999864311              4578999999999999999999999 99999999999999999999


Q ss_pred             EEeccCCcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhh
Q 018244          196 RLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTL  268 (359)
Q Consensus       196 kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~  268 (359)
                      +|+|||++......      ....+++.|+|||.+.+..++.++||||||+++|||++ |..||.............   
T Consensus       164 ~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~---  240 (283)
T cd05048         164 KISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIR---  240 (283)
T ss_pred             EECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH---
Confidence            99999998764322      22345678999999988889999999999999999998 888876544332222111   


Q ss_pred             ccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 018244          269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT  312 (359)
Q Consensus       269 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~  312 (359)
                        .......+...+.++.+|+.+||+.||++|||+.++++.|+.
T Consensus       241 --~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         241 --SRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             --cCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence              111122345677899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=3.8e-44  Score=317.42  Aligned_cols=247  Identities=22%  Similarity=0.332  Sum_probs=203.0

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .+++.+++.||+|+||.||++.+.++..+|+|.+.... .....+.+|+++++.++||||+++++++...+..++||||+
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~   81 (256)
T cd05114           3 PSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM   81 (256)
T ss_pred             HHHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence            35677888999999999999998888889999987543 23467889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----  210 (359)
                      ++|+|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||.++......     
T Consensus        82 ~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~  159 (256)
T cd05114          82 ENGCLLNYLRQ-RQGKLSKDMLLSMCQDVCEGMEYLERN-SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSS  159 (256)
T ss_pred             CCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcceEEEcCCCeEEECCCCCccccCCCceeccC
Confidence            99999999864 234689999999999999999999999 99999999999999999999999999987643322     


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ...++..|+|||.+.+..++.++||||||+++|+|++ |+.||...............     .....+...+..+.+++
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~~~~li  234 (256)
T cd05114         160 GAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRG-----FRLYRPKLASMTVYEVM  234 (256)
T ss_pred             CCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-----CCCCCCCCCCHHHHHHH
Confidence            1233567999999998889999999999999999999 78777554322222111111     11112333456899999


Q ss_pred             HHhcccCCCCCCCHHHHHHHH
Q 018244          290 SRCLQYEPRERPNPRSLVTAL  310 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~L  310 (359)
                      .+||+.||++|||+.++++.|
T Consensus       235 ~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         235 YSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHHccCCcccCcCHHHHHHhh
Confidence            999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=1e-44  Score=338.06  Aligned_cols=251  Identities=22%  Similarity=0.340  Sum_probs=202.7

Q ss_pred             cccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcC-CCcccccccceeeeCCcce
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  129 (359)
                      +|.+.+.||+|+||.||+|...      ++..||+|.+...... ....+.+|+++++.+ +|+||+++++++......+
T Consensus        39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~  118 (374)
T cd05106          39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVL  118 (374)
T ss_pred             HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeE
Confidence            5678888999999999999731      2457999999765332 345688999999999 8999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCC-------------------------------------------------------------
Q 018244          130 LVAEYMPNDTLAKHLFHWE-------------------------------------------------------------  148 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~-------------------------------------------------------------  148 (359)
                      +||||+++|+|.+++....                                                             
T Consensus       119 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (374)
T cd05106         119 VITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSK  198 (374)
T ss_pred             EeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccccc
Confidence            9999999999999885321                                                             


Q ss_pred             -------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC------CcCCC
Q 018244          149 -------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR------SYSTN  215 (359)
Q Consensus       149 -------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~------~~~~t  215 (359)
                             ...+++..+.+++.||+.||.|||++ +++||||||+|||+++++.+||+|||+++......      ...++
T Consensus       199 ~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~  277 (374)
T cd05106         199 DEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK-NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLP  277 (374)
T ss_pred             chhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCc
Confidence                   12478889999999999999999999 99999999999999999999999999987654322      12234


Q ss_pred             ccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcc
Q 018244          216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ  294 (359)
Q Consensus       216 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  294 (359)
                      ..|+|||++.+..++.++||||||+++|+|++ |..||+.......    .............+...+.++.+++.+||+
T Consensus       278 ~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  353 (374)
T cd05106         278 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK----FYKMVKRGYQMSRPDFAPPEIYSIMKMCWN  353 (374)
T ss_pred             cceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH----HHHHHHcccCccCCCCCCHHHHHHHHHHcC
Confidence            67999999988889999999999999999997 8888765432211    111111111222233456789999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHh
Q 018244          295 YEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       295 ~dp~~Rps~~~il~~L~~~  313 (359)
                      .||++|||+.++++.|+++
T Consensus       354 ~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         354 LEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             CChhhCcCHHHHHHHHHHH
Confidence            9999999999999999876

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=4e-44  Score=318.60  Aligned_cols=250  Identities=22%  Similarity=0.338  Sum_probs=208.7

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .++.+.+.||.|+||.||+|.. +.+..||+|.+.... .....+.+|+++++.++|+||+++++++...+..+++|||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            4567778889999999999985 458899999987543 34567899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCC----
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS----  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~----  211 (359)
                      ++++|.+++.......+++..+..++.|++.||+|||++ +++|+||||+||++++++.+||+|||++........    
T Consensus        85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~  163 (263)
T cd05052          85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA  163 (263)
T ss_pred             CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEEcCCCcEEeCCCccccccccceeeccC
Confidence            999999999765556789999999999999999999999 999999999999999999999999999876544321    


Q ss_pred             -cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          212 -YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       212 -~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                       ...+..|+|||.+.+..++.++||||||+++|+|++ |..|++............     .......+...+.++.+++
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li  238 (263)
T cd05052         164 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----KGYRMERPEGCPPKVYELM  238 (263)
T ss_pred             CCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-----CCCCCCCCCCCCHHHHHHH
Confidence             123567999999998889999999999999999998 888876654333222211     1112233445678899999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHh
Q 018244          290 SRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      .+||+.||++|||+.++++.|+.+
T Consensus       239 ~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         239 RACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HHHccCCcccCCCHHHHHHHHHhh
Confidence            999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=1.4e-44  Score=325.93  Aligned_cols=252  Identities=17%  Similarity=0.236  Sum_probs=200.3

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ...+|.+++.||.|+||.||+|.. .++..||+|.+...... ....+.+|+++++.++||||+++++++......++||
T Consensus         3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~   82 (288)
T cd07871           3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF   82 (288)
T ss_pred             ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence            346788999999999999999985 46889999999754322 2446788999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---  209 (359)
                      ||+++ +|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....   
T Consensus        83 e~~~~-~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~  159 (288)
T cd07871          83 EYLDS-DLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKR-KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKT  159 (288)
T ss_pred             eCCCc-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEECcCcceeeccCCCcc
Confidence            99975 89988864 344678999999999999999999999 9999999999999999999999999998764322   


Q ss_pred             -CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhh-------------------
Q 018244          210 -RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL-------------------  268 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~-------------------  268 (359)
                       ....+++.|+|||.+.+ ..++.++||||+|+++|+|++|+.||................                   
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (288)
T cd07871         160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRS  239 (288)
T ss_pred             ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhc
Confidence             23456889999999875 458999999999999999999999887653322211111000                   


Q ss_pred             -ccccccC----CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          269 -TDSCLEG----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       269 -~~~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                       ..+....    ......+.++.+|+.+||+.||.+|||+++++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h  285 (288)
T cd07871         240 YLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH  285 (288)
T ss_pred             cccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence             0000000    0012245788999999999999999999999863

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=3.6e-44  Score=329.67  Aligned_cols=251  Identities=18%  Similarity=0.251  Sum_probs=201.9

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .+|++++.||.|+||.||+|... ++..+|+|.+...... ....+.+|+++++.++|+||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (333)
T cd06650           5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   84 (333)
T ss_pred             hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence            46788899999999999999954 6888999988765322 245688999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--CCc
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSY  212 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--~~~  212 (359)
                      +++|+|.+++.  ....+++..+..++.|++.||.|||+..+++|+||||+|||++.++.+||+|||++......  ...
T Consensus        85 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~  162 (333)
T cd06650          85 MDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF  162 (333)
T ss_pred             CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccC
Confidence            99999999986  34568999999999999999999997537999999999999999999999999998754332  345


Q ss_pred             CCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhh----------------------------
Q 018244          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN----------------------------  264 (359)
Q Consensus       213 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~----------------------------  264 (359)
                      .++..|+|||++.+..++.++|||||||++|+|++|+.||............                            
T Consensus       163 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (333)
T cd06650         163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYG  242 (333)
T ss_pred             CCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhc
Confidence            6889999999999888999999999999999999999988654322111000                            


Q ss_pred             -----------hhhhccccccCCC-ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          265 -----------IQTLTDSCLEGQF-SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       265 -----------~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                 ............. ....+.++.+|+.+||+.||++|||+.+++.+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h  299 (333)
T cd06650         243 PDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH  299 (333)
T ss_pred             ccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence                       0000000000000 11245679999999999999999999999865

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.6e-44  Score=314.64  Aligned_cols=252  Identities=18%  Similarity=0.214  Sum_probs=203.0

Q ss_pred             CCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcc-cccccceeeeCC-----
Q 018244           56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRR-LANLLGCCCEGD-----  126 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~-----  126 (359)
                      ...|..+++||+|+||+||+|+ ..+|+.||+|++......  ......+|+.+|+.|+|+| |+.+++++...+     
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~   89 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI   89 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence            3456778888999999999999 567899999999876542  2345689999999999999 999999998877     


Q ss_pred             -cceEEEecCCCCCHhhhhhcCCC--CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCc
Q 018244          127 -ERLLVAEYMPNDTLAKHLFHWET--QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (359)
Q Consensus       127 -~~~lv~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a  203 (359)
                       .+++|+||++. +|..++.....  ..++...+..+++||+.||+|||++ +|+||||||.||||+++|.+||+|||+|
T Consensus        90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~-~IlHRDLKPQNlLi~~~G~lKlaDFGlA  167 (323)
T KOG0594|consen   90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH-GILHRDLKPQNLLISSSGVLKLADFGLA  167 (323)
T ss_pred             ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCcceEEECCCCcEeeeccchH
Confidence             78999999976 89999975432  4678899999999999999999999 9999999999999999999999999999


Q ss_pred             ccCCCC----CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccccc----
Q 018244          204 KNSRDG----RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE----  274 (359)
Q Consensus       204 ~~~~~~----~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----  274 (359)
                      +...-.    ....+|.+|+|||++.+. .|+...||||+|||+.||++++..|++...-.........+-.+...    
T Consensus       168 ra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~  247 (323)
T KOG0594|consen  168 RAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPG  247 (323)
T ss_pred             HHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCC
Confidence            976522    345679999999999987 59999999999999999999999888764322221111111111000    


Q ss_pred             --------CCC-----C-------hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          275 --------GQF-----S-------SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       275 --------~~~-----~-------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                              ..+     +       +....+..+++.+||+.+|.+|.|++.++.+
T Consensus       248 v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  248 VSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             ccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence                    000     0       1122488999999999999999999999986

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=1.4e-44  Score=335.15  Aligned_cols=246  Identities=17%  Similarity=0.172  Sum_probs=197.5

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      .+.+|..++.||.|+||.||+|.. .+++.||||++...... ....+.+|+++++.++|+||+++++++...+.+++||
T Consensus        72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  151 (353)
T PLN00034         72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL  151 (353)
T ss_pred             CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence            466788889999999999999985 46889999999754332 2456889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---  209 (359)
                      ||+++|+|.+..      ..++..+..++.||+.||.|||++ +++||||||+|||+++++.+||+|||++......   
T Consensus       152 e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~  224 (353)
T PLN00034        152 EFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRR-HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP  224 (353)
T ss_pred             ecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCCEEEcccccceeccccccc
Confidence            999999886533      356788899999999999999999 9999999999999999999999999998765432   


Q ss_pred             -CCcCCCccccCcccccC-----CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          210 -RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~-----~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                       ....||..|+|||++..     ...+.++|||||||++|||++|+.||.......+...... . ........+...+.
T Consensus       225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~  302 (353)
T PLN00034        225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCA-I-CMSQPPEAPATASR  302 (353)
T ss_pred             ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH-H-hccCCCCCCCccCH
Confidence             34568999999998753     2245689999999999999999998863321111110000 0 00111223345677


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ++.+|+.+||+.||++|||+.+++++
T Consensus       303 ~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        303 EFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcC
Confidence            89999999999999999999999874

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=2.6e-44  Score=345.41  Aligned_cols=247  Identities=18%  Similarity=0.198  Sum_probs=205.6

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-C-CcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-N-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ..|.+.+.||+|++|.||+|... + +..||+|.+..........+.+|+.+|+.++||||+++++++...+..+|||||
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~  146 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY  146 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence            45888899999999999999843 3 678999987665544456678899999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---
Q 018244          135 MPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       135 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---  209 (359)
                      +++|+|.+++...  ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....   
T Consensus       147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~  225 (478)
T PTZ00267        147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR-KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL  225 (478)
T ss_pred             CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC-CEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence            9999999987542  345689999999999999999999999 9999999999999999999999999999865432   


Q ss_pred             ---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       210 ---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                         ....||+.|+|||++.+..++.++|||||||++|+|++|+.||................     ....+...+.++.
T Consensus       226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~  300 (478)
T PTZ00267        226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGK-----YDPFPCPVSSGMK  300 (478)
T ss_pred             ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-----CCCCCccCCHHHH
Confidence               23458999999999998889999999999999999999999987654332222221111     1122345667899


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHH
Q 018244          287 RLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +++.+||..||++|||+.+++..
T Consensus       301 ~li~~~L~~dP~~Rps~~~~l~~  323 (478)
T PTZ00267        301 ALLDPLLSKNPALRPTTQQLLHT  323 (478)
T ss_pred             HHHHHHhccChhhCcCHHHHHhC
Confidence            99999999999999999998753

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-46  Score=309.51  Aligned_cols=247  Identities=20%  Similarity=0.231  Sum_probs=212.0

Q ss_pred             cccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCC--CCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .|.+-+.||+|+|+.||++. ..+|+.+|+|.++..  ...+.+++.+|+.+-+.|+||||+++.+.+......|||+|+
T Consensus        12 ~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~   91 (355)
T KOG0033|consen   12 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL   91 (355)
T ss_pred             hhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEec
Confidence            35666778999999999998 557888999988743  223577899999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC---CCCeEEeccCCcccCCCCC-
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDGR-  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~---~~~~kl~DFg~a~~~~~~~-  210 (359)
                      +.|+.|..-+-.  ...+++..+..+++||+.||.|+|.+ +|||||+||+|+++..   ..-+||+|||+|.....+. 
T Consensus        92 m~G~dl~~eIV~--R~~ySEa~aSH~~rQiLeal~yCH~n-~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~  168 (355)
T KOG0033|consen   92 VTGGELFEDIVA--REFYSEADASHCIQQILEALAYCHSN-GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEA  168 (355)
T ss_pred             ccchHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeeeeccCCCceeecccceEEEeCCccc
Confidence            999999877753  35678999999999999999999999 9999999999999953   3459999999999887554 


Q ss_pred             --CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          211 --SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       211 --~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                        ...||++|||||++...+|+..+|||+.|||||-|+.|..||.++....+.+++.....+  ..+...+..++++++|
T Consensus       169 ~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd--~~~~~w~~is~~Ak~L  246 (355)
T KOG0033|consen  169 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYD--YPSPEWDTVTPEAKSL  246 (355)
T ss_pred             cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccC--CCCcccCcCCHHHHHH
Confidence              356899999999999999999999999999999999999999987766666665554333  2233446778999999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+||..||.+|.|+.|+|++
T Consensus       247 vrrML~~dP~kRIta~EAL~H  267 (355)
T KOG0033|consen  247 IRRMLTVNPKKRITADEALKH  267 (355)
T ss_pred             HHHHhccChhhhccHHHHhCC
Confidence            999999999999999999875

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=3.3e-44  Score=325.85  Aligned_cols=250  Identities=18%  Similarity=0.197  Sum_probs=195.9

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .+|.+++.||.|+||.||+|... +++.||+|++...... ....+.+|+.+++.++||||+++++++......++||||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY   84 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence            56888999999999999999954 6889999999754322 234578899999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----C
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~  210 (359)
                      +. ++|.+++.. ....+++..+..++.|++.||+|||++ +++||||||+|||+++++.+||+|||++......    .
T Consensus        85 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  161 (303)
T cd07869          85 VH-TDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQR-YILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYS  161 (303)
T ss_pred             CC-cCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCC
Confidence            96 578887754 345689999999999999999999999 9999999999999999999999999998754322    2


Q ss_pred             CcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHH-Hhhhhhhhhc-----------------cc
Q 018244          211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLT-----------------DS  271 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~-~~~~~~~~~~-----------------~~  271 (359)
                      ...+|+.|+|||++.+. .++.++|||||||++|+|++|..||....... ..........                 ..
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (303)
T cd07869         162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPE  241 (303)
T ss_pred             CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccc
Confidence            34568899999998754 57889999999999999999999987531110 0000000000                 00


Q ss_pred             cccCCCC---------hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          272 CLEGQFS---------SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       272 ~~~~~~~---------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ......+         ...+.++.+|+.+||+.||++|||+.+++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h  288 (303)
T cd07869         242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH  288 (303)
T ss_pred             cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence            0000000         0123578899999999999999999999863

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.3e-45  Score=337.82  Aligned_cols=246  Identities=15%  Similarity=0.133  Sum_probs=200.4

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      +|.+++.||.|+||+||+|.. .+++.||||++....   ......+.+|+.+|..++||||+++++++.+++..++|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (364)
T cd05599           2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME   81 (364)
T ss_pred             CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence            577888899999999999995 468899999997532   1234557889999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC---
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~---  210 (359)
                      |+.+|+|.+++.  ....+++..+..++.|++.||+|||++ +++||||||+|||++.++.++|+|||++.......   
T Consensus        82 ~~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~  158 (364)
T cd05599          82 YLPGGDMMTLLM--KKDTFTEEETRFYIAETILAIDSIHKL-GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE  158 (364)
T ss_pred             CCCCcHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence            999999999986  345689999999999999999999999 99999999999999999999999999986532110   


Q ss_pred             ---------------------------------------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCC
Q 018244          211 ---------------------------------------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI  251 (359)
Q Consensus       211 ---------------------------------------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p  251 (359)
                                                             ...||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P  238 (364)
T cd05599         159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP  238 (364)
T ss_pred             ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence                                                   23589999999999988899999999999999999999999


Q ss_pred             CCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 018244          252 PPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN---PRSLVTA  309 (359)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~il~~  309 (359)
                      |.............. .. ...........++++.+|+.+|+. +|.+|++   +.+++++
T Consensus       239 f~~~~~~~~~~~i~~-~~-~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h  296 (364)
T cd05599         239 FCSDNPQETYRKIIN-WK-ETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH  296 (364)
T ss_pred             CCCCCHHHHHHHHHc-CC-CccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence            876543222211111 00 001111112356789999999996 9999997   8888774

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.5e-45  Score=335.44  Aligned_cols=254  Identities=24%  Similarity=0.365  Sum_probs=212.8

Q ss_pred             ccccCCCCCCcEEEEEEeCC--C---cEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           61 IVSEHGEKAPNVVYKGKLEN--Q---FRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~~~--~---~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      +.++||+|+||.||+|++..  +   ..||||......   .....++.+|.++|+.++|||||+++|++.....++|||
T Consensus       161 l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivm  240 (474)
T KOG0194|consen  161 LGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVM  240 (474)
T ss_pred             ccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEE
Confidence            44788999999999998532  2   238999998532   344678999999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCC-
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-  211 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~-  211 (359)
                      |+|.||+|.++|+. ....++..++..++.+.|.||+|||++ +++||||-..|+|++.++.+||+|||+++....... 
T Consensus       241 El~~gGsL~~~L~k-~~~~v~~~ek~~~~~~AA~Gl~YLh~k-~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~  318 (474)
T KOG0194|consen  241 ELCNGGSLDDYLKK-NKKSLPTLEKLRFCYDAARGLEYLHSK-NCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMK  318 (474)
T ss_pred             EecCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHhHHHHHHHC-CCcchhHhHHHheecCCCeEEeCccccccCCcceeec
Confidence            99999999999975 333799999999999999999999999 999999999999999999999999999887652221 


Q ss_pred             ---cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          212 ---YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       212 ---~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                         ..-...|+|||.+..+.|+.++|||||||++||+++ |..|+++...........    ....+...+...+.++..
T Consensus       319 ~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~----~~~~r~~~~~~~p~~~~~  394 (474)
T KOG0194|consen  319 KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIV----KNGYRMPIPSKTPKELAK  394 (474)
T ss_pred             cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHH----hcCccCCCCCCCHHHHHH
Confidence               123468999999999999999999999999999999 777777765544433331    222333445677889999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHHHhhhcccCC
Q 018244          288 LASRCLQYEPRERPNPRSLVTALVTLQKDTEVS  320 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~  320 (359)
                      ++.+||..||++||||.++.+.|+.+.......
T Consensus       395 ~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~~  427 (474)
T KOG0194|consen  395 VMKQCWKKDPEDRPTMSTIKKKLEALEKKKEAF  427 (474)
T ss_pred             HHHHhccCChhhccCHHHHHHHHHHHHhccccc
Confidence            999999999999999999999999998766643

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-44  Score=335.32  Aligned_cols=246  Identities=20%  Similarity=0.202  Sum_probs=204.1

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      +|.+++.||+|+||+||+|... ++..||+|++....   ......+.+|++++..++|+||+++++++.+.+..++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME   81 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence            5778889999999999999954 68899999997542   1334568889999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC---
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~---  210 (359)
                      |+++++|.+++..  ...+++..+..++.|++.||+|||+. |++||||||+|||++.++.+||+|||++.......   
T Consensus        82 ~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~  158 (350)
T cd05573          82 YMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKL-GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE  158 (350)
T ss_pred             CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence            9999999999974  36799999999999999999999999 99999999999999999999999999987654322   


Q ss_pred             ------------------------------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHH
Q 018244          211 ------------------------------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI  260 (359)
Q Consensus       211 ------------------------------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~  260 (359)
                                                    ...||+.|+|||++.+..++.++|||||||++|+|++|+.||........
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~  238 (350)
T cd05573         159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET  238 (350)
T ss_pred             ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence                                          34578999999999999999999999999999999999999876543322


Q ss_pred             hhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCC-HHHHHHH
Q 018244          261 RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN-PRSLVTA  309 (359)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-~~~il~~  309 (359)
                      ...... .. ...........++++.+|+.+||. ||.+||+ +.+++++
T Consensus       239 ~~~i~~-~~-~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         239 YNKIIN-WK-ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             HHHHhc-cC-CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            221111 00 111111112257889999999997 9999999 9999975

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=2.7e-44  Score=329.41  Aligned_cols=241  Identities=19%  Similarity=0.286  Sum_probs=197.0

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHH---hcCCCcccccccceeeeCCcceEE
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAV---GQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l---~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      |++++.||+|+||.||+|.. .+++.||||++....   ....+.+.+|++++   +.++||||+++++++...+..++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            56788899999999999984 468899999997532   12234566666554   566899999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC---
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---  208 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~---  208 (359)
                      |||+++++|..++.   ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++....   
T Consensus        81 ~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~  156 (324)
T cd05589          81 MEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHEN-KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD  156 (324)
T ss_pred             EcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC
Confidence            99999999998873   45799999999999999999999999 999999999999999999999999999875322   


Q ss_pred             -CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          209 -GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       209 -~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                       .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...............      ....+...+.++.+
T Consensus       157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~  230 (324)
T cd05589         157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND------EVRYPRFLSREAIS  230 (324)
T ss_pred             cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHH
Confidence             22456889999999999888999999999999999999999998765433322221111      11234456788999


Q ss_pred             HHHHhcccCCCCCC-----CHHHHHHH
Q 018244          288 LASRCLQYEPRERP-----NPRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rp-----s~~~il~~  309 (359)
                      ++.+||+.||++||     ++.+++++
T Consensus       231 li~~~L~~dP~~R~~~~~~~~~~l~~~  257 (324)
T cd05589         231 IMRRLLRRNPERRLGSGEKDAEDVKKQ  257 (324)
T ss_pred             HHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence            99999999999999     56666654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.3e-45  Score=321.23  Aligned_cols=244  Identities=23%  Similarity=0.272  Sum_probs=193.8

Q ss_pred             cccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCC-----cceEEEe
Q 018244           60 NIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERLLVAE  133 (359)
Q Consensus        60 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e  133 (359)
                      .-.+.+|.|+||.||+|.. .+++.||||++..+..    .-.+|+++|+.++|||||++.-+|....     ...+|||
T Consensus        27 ~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVle  102 (364)
T KOG0658|consen   27 EAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLE  102 (364)
T ss_pred             EeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHH
Confidence            3445569999999999994 4578999999976542    2346999999999999999988886432     4568999


Q ss_pred             cCCCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC-CCeEEeccCCcccCCCCC
Q 018244          134 YMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~-~~~kl~DFg~a~~~~~~~  210 (359)
                      |++. +|.++++..  .+..++.-.+.-+++||++||+|||+. +|+||||||.|+|+|.+ |.+||||||.|+....+.
T Consensus       103 ymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~-~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e  180 (364)
T KOG0658|consen  103 YMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH-GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE  180 (364)
T ss_pred             hchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc-CcccCCCChheEEEcCCCCeEEeccCCcceeeccCC
Confidence            9987 899998642  356788888999999999999999998 99999999999999965 999999999999876655


Q ss_pred             ---CcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhh------------------
Q 018244          211 ---SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL------------------  268 (359)
Q Consensus       211 ---~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~------------------  268 (359)
                         ++.-|.-|+|||.+.+.. |+.+.||||.||++.||+-|++.|+++............+                  
T Consensus       181 pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~  260 (364)
T KOG0658|consen  181 PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEF  260 (364)
T ss_pred             CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccc
Confidence               445588999999999865 9999999999999999999999998763322211111110                  


Q ss_pred             -----ccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          269 -----TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       269 -----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                           ....+...+....++++.+|+.++|.++|.+|.++.+++.+
T Consensus       261 ~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h  306 (364)
T KOG0658|consen  261 KFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH  306 (364)
T ss_pred             cCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence                 00000011334567899999999999999999999999864

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=9.1e-44  Score=319.04  Aligned_cols=249  Identities=22%  Similarity=0.326  Sum_probs=205.2

Q ss_pred             CcccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      ..|.+++.||+|+||.||+|...      ++..||+|.+...... ..+.+.+|+++|+.++|+||+++++++......+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            35778888999999999999853      2478999999865544 3567899999999999999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCC------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEE
Q 018244          130 LVAEYMPNDTLAKHLFHWE------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL  197 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl  197 (359)
                      +||||+++++|.+++....            ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~h~dlkp~nili~~~~~~kl  163 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ-HFVHRDLATRNCLVGYDLVVKI  163 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-CeeccccccceEEEcCCCeEEE
Confidence            9999999999999996431            24578999999999999999999999 9999999999999999999999


Q ss_pred             eccCCcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhcc
Q 018244          198 SCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTD  270 (359)
Q Consensus       198 ~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~  270 (359)
                      +|||++......      ....+++.|+|||++.+..++.++||||||+++|+|++ |..||..............    
T Consensus       164 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~----  239 (280)
T cd05049         164 GDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQ----  239 (280)
T ss_pred             CCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc----
Confidence            999998754321      22334678999999998899999999999999999998 8888765433322222111    


Q ss_pred             ccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 018244          271 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       271 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~  311 (359)
                       ......+...+..+.+++.+||+.||++|||+.++++.|+
T Consensus       240 -~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         240 -GRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             -CCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence             1111223446678999999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=3.7e-44  Score=328.33  Aligned_cols=238  Identities=18%  Similarity=0.242  Sum_probs=197.3

Q ss_pred             ccCCCCCCcEEEEEEe----CCCcEEEEEEeCCCC----CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           63 SEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      +.||+|+||.||++..    .++..||+|++....    ......+.+|+.+|+.++||||+++++++...+..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5679999999999984    357889999987532    12234577899999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----C
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~  210 (359)
                      +++++|.+++.  ....+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||+++.....    .
T Consensus        82 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  158 (323)
T cd05584          82 LSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQ-GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH  158 (323)
T ss_pred             CCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence            99999999986  345688899999999999999999999 9999999999999999999999999998753222    2


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ...||+.|+|||++.+..++.++||||||+++|+|++|+.||.............    ..  ....+...+.++.+++.
T Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~li~  232 (323)
T cd05584         159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKIL----KG--KLNLPPYLTPEARDLLK  232 (323)
T ss_pred             ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHH----cC--CCCCCCCCCHHHHHHHH
Confidence            3468899999999998889999999999999999999999987654332222111    11  11234456778999999


Q ss_pred             HhcccCCCCCC-----CHHHHHHH
Q 018244          291 RCLQYEPRERP-----NPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rp-----s~~~il~~  309 (359)
                      +||+.||++||     ++.+++++
T Consensus       233 ~~l~~~p~~R~~~~~~~~~~l~~h  256 (323)
T cd05584         233 KLLKRNPSSRLGAGPGDAAEVQSH  256 (323)
T ss_pred             HHcccCHhHcCCCCCCCHHHHhcC
Confidence            99999999999     78888764

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=8.6e-44  Score=315.29  Aligned_cols=247  Identities=23%  Similarity=0.349  Sum_probs=203.7

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      .+|.+++.||+|+||+||+|...++..+|+|.+.... ...+.+.+|+.+++.++||||+++++++......++||||+.
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            4678889999999999999998777779999987544 234678999999999999999999999998889999999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----C
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S  211 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----~  211 (359)
                      +|+|.+++... ...+++..++.++.|++.||+|||+. +++|+||||+||++++++.+||+|||.++......     .
T Consensus        83 ~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~  160 (256)
T cd05113          83 NGCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESK-QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVG  160 (256)
T ss_pred             CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCC
Confidence            99999998642 33689999999999999999999999 99999999999999999999999999987654322     1


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ..++..|+|||.+.+..++.++||||||+++|+|++ |..|+...............     .....+...+..+.+++.
T Consensus       161 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~  235 (256)
T cd05113         161 SKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQG-----LRLYRPHLASEKVYAIMY  235 (256)
T ss_pred             CccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcC-----CCCCCCCCCCHHHHHHHH
Confidence            224567999999998889999999999999999998 88776544332222222111     111123335678999999


Q ss_pred             HhcccCCCCCCCHHHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~L~  311 (359)
                      +||+.||++|||+.+++..|+
T Consensus       236 ~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         236 SCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHcCCCcccCCCHHHHHHhhC
Confidence            999999999999999998763

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=1.7e-43  Score=323.12  Aligned_cols=253  Identities=18%  Similarity=0.270  Sum_probs=204.4

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCc----EEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQF----RIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .+|++++.||+|+||.||+|.+. ++.    .||+|.+..... ...+.+.+|+.+++.++||||+++++++... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            46788888999999999999853 333    489999875432 3356788999999999999999999998764 6789


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      ++||+++|+|.+++.. ....+++..+..++.||+.||+|||+. +++||||||+|||+++++.+||+|||+++......
T Consensus        86 v~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~-~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~  163 (316)
T cd05108          86 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEER-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE  163 (316)
T ss_pred             eeecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHhc-CeeccccchhheEecCCCcEEEccccccccccCCC
Confidence            9999999999999974 345688999999999999999999999 99999999999999999999999999998765332


Q ss_pred             C------cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          211 S------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       211 ~------~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                      .      ..++..|+|||.+.+..++.++||||||+++|||++ |..|+..........     ..........+..++.
T Consensus       164 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  238 (316)
T cd05108         164 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-----ILEKGERLPQPPICTI  238 (316)
T ss_pred             cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH-----HHhCCCCCCCCCCCCH
Confidence            1      123567999999998899999999999999999998 887776543322211     1111111122344567


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT  317 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~  317 (359)
                      ++.+++.+||..||++|||+.+++..|..+.++.
T Consensus       239 ~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~  272 (316)
T cd05108         239 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP  272 (316)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999998886543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=5.9e-45  Score=323.31  Aligned_cols=244  Identities=27%  Similarity=0.455  Sum_probs=195.3

Q ss_pred             ccccCCCCCCcEEEEEEeC-----CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           61 IVSEHGEKAPNVVYKGKLE-----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      +.+.||.|+||.||+|.+.     .+..|+||.++..... ..+.+.+|++.+++++||||++++|++...+..++|+||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            4567899999999999965     3678999999764333 367899999999999999999999999988889999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-----
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----  209 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-----  209 (359)
                      +++|+|.+++.......+++..+..|+.|++.||.|||++ +++|+||+++||++++++.+||+|||++......     
T Consensus        83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~  161 (259)
T PF07714_consen   83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN-NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKN  161 (259)
T ss_dssp             -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT-TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999875567899999999999999999999999 9999999999999999999999999998876322     


Q ss_pred             -CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                       ........|+|||.+.+..++.++||||||+++|||++ |+.|+............     ........+..++..+.+
T Consensus       162 ~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  236 (259)
T PF07714_consen  162 DSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL-----KQGQRLPIPDNCPKDIYS  236 (259)
T ss_dssp             STTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH-----HTTEETTSBTTSBHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccceeccchhHHHHH
Confidence             22335678999999998889999999999999999999 56666544322222111     111222334556778999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVTAL  310 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~L  310 (359)
                      ++.+||+.||++|||+.++++.|
T Consensus       237 li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  237 LIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHT-SSGGGS--HHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHhcC
Confidence            99999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=1.3e-44  Score=331.66  Aligned_cols=237  Identities=19%  Similarity=0.244  Sum_probs=198.0

Q ss_pred             cCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCC
Q 018244           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs  139 (359)
                      .||+|+||.||++.. .++..||+|.+....   ......+.+|++++..++||||+++.+++...+..++||||+++|+
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~   81 (325)
T cd05594           2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE   81 (325)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence            479999999999984 578899999997532   2234567889999999999999999999999999999999999999


Q ss_pred             HhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CCcCC
Q 018244          140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYST  214 (359)
Q Consensus       140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~~~~  214 (359)
                      |..++.  ....+++..+..++.||+.||.|||+ . +++||||||+|||++.++.+||+|||+++.....    ....|
T Consensus        82 L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~-~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  158 (325)
T cd05594          82 LFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG  158 (325)
T ss_pred             HHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcC-CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccC
Confidence            999886  44578999999999999999999997 6 9999999999999999999999999998753221    23468


Q ss_pred             CccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcc
Q 018244          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ  294 (359)
Q Consensus       215 t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  294 (359)
                      |+.|+|||++.+..++.++||||||+++|+|++|..||..............    .  ...++...++++.+++.+||+
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~----~--~~~~p~~~~~~~~~li~~~L~  232 (325)
T cd05594         159 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM----E--EIRFPRTLSPEAKSLLSGLLK  232 (325)
T ss_pred             CcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhc----C--CCCCCCCCCHHHHHHHHHHhh
Confidence            9999999999988899999999999999999999999876543332222111    1  112344567789999999999


Q ss_pred             cCCCCCC-----CHHHHHHH
Q 018244          295 YEPRERP-----NPRSLVTA  309 (359)
Q Consensus       295 ~dp~~Rp-----s~~~il~~  309 (359)
                      .||++|+     ++.+++++
T Consensus       233 ~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         233 KDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             cCHHHhCCCCCCCHHHHhcC
Confidence            9999997     89998865

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=2.7e-44  Score=334.47  Aligned_cols=246  Identities=13%  Similarity=0.082  Sum_probs=197.6

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      +|++++.||+|+||+||+|.. .+++.||+|++....   ......+.+|+.++..++|+||+++++.+.+....++|||
T Consensus         2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E   81 (363)
T cd05628           2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME   81 (363)
T ss_pred             CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence            567888899999999999984 468899999997532   1223567889999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |+++|+|.+++.  ....+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.....    
T Consensus        82 ~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~-givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~  158 (363)
T cd05628          82 FLPGGDMMTLLM--KKDTLTEEETQFYIAETVLAIDSIHQL-GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE  158 (363)
T ss_pred             CCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence            999999999996  446799999999999999999999999 9999999999999999999999999998753211    


Q ss_pred             -----------------------------------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCc
Q 018244          210 -----------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (359)
Q Consensus       210 -----------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~  254 (359)
                                                         ....||+.|+|||++.+..++.++|||||||++|||++|..||..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~  238 (363)
T cd05628         159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (363)
T ss_pred             ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence                                               124689999999999988999999999999999999999999876


Q ss_pred             chhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCC---CCCCHHHHHHH
Q 018244          255 HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR---ERPNPRSLVTA  309 (359)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~---~Rps~~~il~~  309 (359)
                      ................  .........+.++.+++.+++. +|.   .||++++++++
T Consensus       239 ~~~~~~~~~i~~~~~~--~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~h  293 (363)
T cd05628         239 ETPQETYKKVMNWKET--LIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTN  293 (363)
T ss_pred             CCHHHHHHHHHcCcCc--ccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCC
Confidence            5433322221110000  0000112356788899988664 444   45899999886

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.5e-43  Score=314.54  Aligned_cols=249  Identities=21%  Similarity=0.321  Sum_probs=206.8

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      ..+++.+.||+|++|.||+|...++..||+|.+.... ...+.+.+|+.++++++|+||+++++++...+..+++|||++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (261)
T cd05068           6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK   84 (261)
T ss_pred             hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeeccc
Confidence            3567888899999999999997777889999997654 235678899999999999999999999999999999999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC--CcCC
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--SYST  214 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~--~~~~  214 (359)
                      +++|.+++.......+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||+++......  ...+
T Consensus        85 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  163 (261)
T cd05068          85 YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ-NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREG  163 (261)
T ss_pred             CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCC
Confidence            99999999754445789999999999999999999999 99999999999999999999999999988654322  1122


Q ss_pred             ---CccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          215 ---NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       215 ---t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                         +..|+|||.+.+..++.++||||||+++|+|++ |+.||..............     ......+...+..+.+++.
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~  238 (261)
T cd05068         164 AKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQ-----GYRMPCPPGCPKELYDIML  238 (261)
T ss_pred             CcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----CCCCCCCCcCCHHHHHHHH
Confidence               357999999998889999999999999999999 8877765433222211111     1111223456678999999


Q ss_pred             HhcccCCCCCCCHHHHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTALVT  312 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~L~~  312 (359)
                      +||+.+|++||++.+++..|+.
T Consensus       239 ~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         239 DCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             HHhhcCcccCCCHHHHHHHHhc
Confidence            9999999999999999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=2.6e-44  Score=336.61  Aligned_cols=247  Identities=17%  Similarity=0.160  Sum_probs=198.5

Q ss_pred             cccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      .|.+++.||+|+||+||+|. ..++..||+|++....   ......+.+|++++..++|+||+++++++.+.+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            56788899999999999998 4568899999997543   2234568899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC-----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-----  208 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~-----  208 (359)
                      |+++|+|.+++.  ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++.....     
T Consensus        82 ~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~~LH~~-givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~  158 (381)
T cd05626          82 YIPGGDMMSLLI--RMEVFPEVLARFYIAELTLAIESVHKM-GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK  158 (381)
T ss_pred             cCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence            999999999986  345689999999999999999999999 999999999999999999999999998753210     


Q ss_pred             ----------------------------------------------CCCcCCCccccCcccccCCCCCCccchhhHHHHH
Q 018244          209 ----------------------------------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLL  242 (359)
Q Consensus       209 ----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il  242 (359)
                                                                    .....||+.|+|||++.+..++.++|||||||++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il  238 (381)
T cd05626         159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL  238 (381)
T ss_pred             cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence                                                          0124688999999999988899999999999999


Q ss_pred             HHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHh--cccCCCCCCCHHHHHHH
Q 018244          243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC--LQYEPRERPNPRSLVTA  309 (359)
Q Consensus       243 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c--l~~dp~~Rps~~~il~~  309 (359)
                      |||++|..||.............. . ............+.++.+|+.+|  +..++..||++.+++++
T Consensus       239 ~elltG~~Pf~~~~~~~~~~~i~~-~-~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h  305 (381)
T cd05626         239 FEMLVGQPPFLAPTPTETQLKVIN-W-ENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH  305 (381)
T ss_pred             HHHHhCCCCCcCCCHHHHHHHHHc-c-ccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            999999999876433222111111 0 00011111123567899999884  45566669999999875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=1.4e-43  Score=319.42  Aligned_cols=254  Identities=23%  Similarity=0.319  Sum_probs=207.4

Q ss_pred             CcccccccCCCCCCcEEEEEEe------CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      ..|.+.+.+|.|+||.||++..      .++..+|+|.+..........+.+|+++++.++|+||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            3567778889999999999974      2356799999986654556678999999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEec
Q 018244          131 VAEYMPNDTLAKHLFHWE-----------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC  199 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~D  199 (359)
                      ||||+++++|.+++....           ...+++..+..++.|++.||+|||++ +++||||||+||++++++.++|+|
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~-~i~H~dlkp~Nili~~~~~~kl~d  163 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIGD  163 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccCcceEEEccCCcEEecc
Confidence            999999999999986321           23589999999999999999999999 999999999999999999999999


Q ss_pred             cCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhcccc
Q 018244          200 FGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSC  272 (359)
Q Consensus       200 Fg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~  272 (359)
                      ||++.......      ...++..|+|||.+.+..++.++||||||+++|+|++ |..||................    
T Consensus       164 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~----  239 (288)
T cd05093         164 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR----  239 (288)
T ss_pred             CCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----
Confidence            99987653321      2234668999999998889999999999999999998 777765543322222211111    


Q ss_pred             ccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       273 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                       ....+...+.++.+|+.+||+.||.+|||+.++++.|+.+.+.
T Consensus       240 -~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         240 -VLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             -cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence             1112234567899999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.2e-44  Score=321.73  Aligned_cols=248  Identities=17%  Similarity=0.212  Sum_probs=203.0

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc---hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      |++++.||+|+||+||++.. .++..||+|.+......   ....+.+|+.+++.++|+||+++++.+..++..++||||
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence            56777889999999999985 46889999999754322   234567899999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC---C
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---S  211 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~---~  211 (359)
                      +.+|+|.+++.......+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||++.......   .
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  160 (285)
T cd05605          82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE-RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG  160 (285)
T ss_pred             cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence            9999999888654445789999999999999999999999 99999999999999999999999999988754332   3


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ..|+..|+|||++.+..++.++||||+|+++|+|++|..||...............+..  ....++...+..+.+|+.+
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~  238 (285)
T cd05605         161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE--DQEEYSEKFSEAARSICRQ  238 (285)
T ss_pred             ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh--cccccCcccCHHHHHHHHH
Confidence            46789999999999888999999999999999999999998764332211111111111  1122344567789999999


Q ss_pred             hcccCCCCCC-----CHHHHHHH
Q 018244          292 CLQYEPRERP-----NPRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rp-----s~~~il~~  309 (359)
                      ||+.||++||     ++++++++
T Consensus       239 ~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         239 LLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             HccCCHHHhcCCCCCCHHHHhcC
Confidence            9999999999     77787654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=8.8e-44  Score=320.89  Aligned_cols=249  Identities=18%  Similarity=0.223  Sum_probs=194.0

Q ss_pred             cccccccCCCCCCcEEEEEEe-C-CCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcC---CCcccccccceeee-----C
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-E-NQFRIAVKRFNRSAWP--DARQFLEEARAVGQL---RNRRLANLLGCCCE-----G  125 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l---~h~niv~~~~~~~~-----~  125 (359)
                      .|++++.||+|+||.||+|.. . ++..||+|.+......  ....+.+|+.+++.+   +||||+++++++..     .
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            577888999999999999985 3 4678999998754322  233556777777665   69999999998852     4


Q ss_pred             CcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCccc
Q 018244          126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (359)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~  205 (359)
                      ...++||||++ ++|.+++.......+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++..
T Consensus        82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~-~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~  159 (290)
T cd07862          82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLARI  159 (290)
T ss_pred             CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence            56899999996 5899998765556789999999999999999999999 999999999999999999999999999876


Q ss_pred             CCCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhc-------------
Q 018244          206 SRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT-------------  269 (359)
Q Consensus       206 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~-------------  269 (359)
                      ....   ....+|+.|+|||.+.+..++.++||||||+++|+|++|..||.................             
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  239 (290)
T cd07862         160 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL  239 (290)
T ss_pred             ccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcc
Confidence            5433   234578999999999888899999999999999999999988865432211111110000             


Q ss_pred             -ccccc--C-----CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          270 -DSCLE--G-----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       270 -~~~~~--~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                       .....  .     ......+..+.+|+.+||+.||++|||+.++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         240 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             cchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence             00000  0     011234567899999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1e-43  Score=326.38  Aligned_cols=247  Identities=19%  Similarity=0.173  Sum_probs=212.0

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc---hHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP---DARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv  131 (359)
                      ..|.+.+.||.|.||.||+++.+ +|..+|+|.+.+....   ..+.+.+|+++|+.+. |||||.+++.|.+...+++|
T Consensus        35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv  114 (382)
T KOG0032|consen   35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV  114 (382)
T ss_pred             ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence            35677788999999999999954 5999999999876443   3467899999999998 99999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC----CCeEEeccCCcccCC
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD----VNPRLSCFGLMKNSR  207 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~----~~~kl~DFg~a~~~~  207 (359)
                      ||++.||.|.+.+...   .+++..+..++.|++.|++|||+. |++||||||+|+|+...    +.+|++|||++....
T Consensus       115 mEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~-gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~  190 (382)
T KOG0032|consen  115 MELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSL-GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK  190 (382)
T ss_pred             EEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence            9999999999999764   499999999999999999999999 99999999999999633    579999999999877


Q ss_pred             CC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHH
Q 018244          208 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE  284 (359)
Q Consensus       208 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (359)
                      .+   ....||+.|+|||++....|+..+||||+|+++|.|++|.+||...............-.  ..........+..
T Consensus       191 ~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~--~f~~~~w~~is~~  268 (382)
T KOG0032|consen  191 PGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF--DFTSEPWDDISES  268 (382)
T ss_pred             CCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC--CCCCCCccccCHH
Confidence            63   356899999999999999999999999999999999999999988765444332222111  1222334567889


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          285 LVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       285 l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+++..|+..||.+|+|+.++|++
T Consensus       269 akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  269 AKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             HHHHHHHhcccCcccCCCHHHHhcC
Confidence            9999999999999999999999985

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=4.1e-44  Score=328.19  Aligned_cols=237  Identities=19%  Similarity=0.230  Sum_probs=196.1

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCC-cccccccceeeeCCcceEEE
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRN-RRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~  132 (359)
                      +|.+++.||+|+||.||+|.. .+++.||+|++....   ....+.+..|.+++..+.| ++|+++++++...+..++||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            467888999999999999985 457889999997532   2334567889999999976 46888999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----  208 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----  208 (359)
                      ||+++|+|.+++.  ....+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||++.....    
T Consensus        81 E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~  157 (324)
T cd05587          81 EYVNGGDLMYHIQ--QVGKFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT  157 (324)
T ss_pred             cCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCc
Confidence            9999999999886  345689999999999999999999999 999999999999999999999999999874321    


Q ss_pred             CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          209 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       209 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                      .....||+.|+|||++.+..++.++||||||+++|+|+||+.||..............      ....++...+.++.++
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~------~~~~~~~~~~~~~~~l  231 (324)
T cd05587         158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIME------HNVSYPKSLSKEAVSI  231 (324)
T ss_pred             eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHc------CCCCCCCCCCHHHHHH
Confidence            1234689999999999988899999999999999999999999876543332222211      1122345567789999


Q ss_pred             HHHhcccCCCCCCCH
Q 018244          289 ASRCLQYEPRERPNP  303 (359)
Q Consensus       289 i~~cl~~dp~~Rps~  303 (359)
                      +.+||..||.+|++.
T Consensus       232 i~~~l~~~P~~R~~~  246 (324)
T cd05587         232 CKGLLTKHPAKRLGC  246 (324)
T ss_pred             HHHHhhcCHHHcCCC
Confidence            999999999999976

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=4.5e-44  Score=327.27  Aligned_cols=231  Identities=20%  Similarity=0.257  Sum_probs=193.0

Q ss_pred             cCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEecCCCC
Q 018244           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      .||+|+||+||+|.. .++..||+|++....   ....+.+..|..++..+ +||||+++++++...+..++||||+++|
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g   81 (320)
T cd05590           2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG   81 (320)
T ss_pred             eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence            479999999999995 468899999987532   22345677888888877 6999999999999999999999999999


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----CCCcCC
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----~~~~~~  214 (359)
                      +|.+++.  ....+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++.....    .....|
T Consensus        82 ~L~~~i~--~~~~l~~~~~~~~~~ql~~~L~~lH~~-~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~g  158 (320)
T cd05590          82 DLMFHIQ--KSRRFDEARARFYAAEITSALMFLHDK-GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCG  158 (320)
T ss_pred             hHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccccccc
Confidence            9999886  445789999999999999999999999 999999999999999999999999999875322    123468


Q ss_pred             CccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcc
Q 018244          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ  294 (359)
Q Consensus       215 t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  294 (359)
                      |+.|+|||++.+..++.++||||||+++|+|++|+.||...............      ....+...+.++.+++.+||+
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~L~  232 (320)
T cd05590         159 TPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND------EVVYPTWLSQDAVDILKAFMT  232 (320)
T ss_pred             CccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHcc
Confidence            99999999999888999999999999999999999998765443332222211      112334467789999999999


Q ss_pred             cCCCCCCCH
Q 018244          295 YEPRERPNP  303 (359)
Q Consensus       295 ~dp~~Rps~  303 (359)
                      .||++||++
T Consensus       233 ~dP~~R~~~  241 (320)
T cd05590         233 KNPTMRLGS  241 (320)
T ss_pred             cCHHHCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=1e-43  Score=318.52  Aligned_cols=245  Identities=16%  Similarity=0.202  Sum_probs=196.8

Q ss_pred             CCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCH
Q 018244           65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (359)
Q Consensus        65 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL  140 (359)
                      ||+|+||.||++.. .+|..+|+|.+.....   .....+..|+++++.++||||+++++++..+...++||||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            59999999999984 4688999999975321   1233456799999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC---CcCCCcc
Q 018244          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---SYSTNLA  217 (359)
Q Consensus       141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~---~~~~t~~  217 (359)
                      .+++.......+++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||++.......   ...++..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~  159 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSM-DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNG  159 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC-CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCC
Confidence            9988655556789999999999999999999999 99999999999999999999999999987654432   3457889


Q ss_pred             ccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCC
Q 018244          218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP  297 (359)
Q Consensus       218 y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp  297 (359)
                      |+|||++.+..++.++|||||||++|+|++|..||...................... ......+.++.+|+.+||+.||
T Consensus       160 y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~~P  238 (277)
T cd05607         160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVK-FEHQNFTEESKDICRLFLAKKP  238 (277)
T ss_pred             ccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccc-cccccCCHHHHHHHHHHhccCH
Confidence            999999998889999999999999999999999886532211111111111111111 1112456789999999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 018244          298 RERPNPRSLVTALV  311 (359)
Q Consensus       298 ~~Rps~~~il~~L~  311 (359)
                      ++||++.++++.+.
T Consensus       239 ~~R~~~~~~~~~~~  252 (277)
T cd05607         239 EDRLGSREKNDDPR  252 (277)
T ss_pred             hhCCCCccchhhhh
Confidence            99999987764433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=2e-43  Score=317.46  Aligned_cols=251  Identities=23%  Similarity=0.351  Sum_probs=203.6

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-----CCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      ++++++.+.||+|+||.||+|..     ..+..+|+|.+...... ....+.+|+.+++.++||||+++++++......+
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   83 (283)
T cd05090           4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC   83 (283)
T ss_pred             hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence            45678889999999999999984     24678999999754332 3456889999999999999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCC---------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWE---------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN  194 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~  194 (359)
                      ++|||+++++|.+++....               ...+++..+..++.|++.||.|||++ +++|+||||+||++++++.
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~nili~~~~~  162 (283)
T cd05090          84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH-FFVHKDLAARNILIGEQLH  162 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc-CeehhccccceEEEcCCCc
Confidence            9999999999999985321               23578999999999999999999999 9999999999999999999


Q ss_pred             eEEeccCCcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhh
Q 018244          195 PRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQT  267 (359)
Q Consensus       195 ~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~  267 (359)
                      +||+|||+++.....      ....++..|+|||.+.+..++.++||||||+++|+|++ |..||.............. 
T Consensus       163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-  241 (283)
T cd05090         163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRK-  241 (283)
T ss_pred             EEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-
Confidence            999999998765332      22334567999999988889999999999999999998 7777755432222111111 


Q ss_pred             hccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 018244          268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT  312 (359)
Q Consensus       268 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~  312 (359)
                          ......+...+..+.+++.+||+.||++||++.++++.|+.
T Consensus       242 ----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         242 ----RQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             ----CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence                11112334556789999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6.8e-45  Score=304.46  Aligned_cols=252  Identities=19%  Similarity=0.202  Sum_probs=206.9

Q ss_pred             hcCCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCC----ch----HHHHHHHHHHHhcCC-Cccccccccee
Q 018244           53 TSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW----PD----ARQFLEEARAVGQLR-NRRLANLLGCC  122 (359)
Q Consensus        53 ~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~----~~----~~~~~~e~~~l~~l~-h~niv~~~~~~  122 (359)
                      ...|..|.-.+.+|.|..++|-++. ..+|..+|+|++.....    +.    .+.-.+|+.+|+++. ||+|+++.++|
T Consensus        13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y   92 (411)
T KOG0599|consen   13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY   92 (411)
T ss_pred             hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence            3445566666667999999999987 55788899999874321    11    234567999999995 99999999999


Q ss_pred             eeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCC
Q 018244          123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (359)
Q Consensus       123 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~  202 (359)
                      ..+..+++|+|.|+.|.|.+++.  ..-.+++....+|++|+..|+.|||.+ +||||||||+|||+|++.++||+|||+
T Consensus        93 es~sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~-~IVHRDLKpENILlddn~~i~isDFGF  169 (411)
T KOG0599|consen   93 ESDAFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHAR-NIVHRDLKPENILLDDNMNIKISDFGF  169 (411)
T ss_pred             cCcchhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHh-hhhhcccChhheeeccccceEEeccce
Confidence            99999999999999999999996  667899999999999999999999999 999999999999999999999999999


Q ss_pred             cccCCCCC---CcCCCccccCcccccC------CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccc
Q 018244          203 MKNSRDGR---SYSTNLAFTPPEYLRT------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL  273 (359)
Q Consensus       203 a~~~~~~~---~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  273 (359)
                      ++...++.   ..+||++|.|||.+..      ..|+..+|+||+|||+|-|+.|.+||.....-.+........  -..
T Consensus       170 a~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGk--yqF  247 (411)
T KOG0599|consen  170 ACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGK--YQF  247 (411)
T ss_pred             eeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcc--ccc
Confidence            99988775   5689999999998763      358889999999999999999998876543222221111111  111


Q ss_pred             cCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ......+.+.+.++||.+||+.||.+|.|++|+|.+
T Consensus       248 ~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH  283 (411)
T KOG0599|consen  248 RSPEWADISATVKDLISRLLQVDPTKRITAKEALAH  283 (411)
T ss_pred             CCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence            222335678899999999999999999999999975

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=2.4e-43  Score=318.26  Aligned_cols=253  Identities=22%  Similarity=0.312  Sum_probs=207.9

Q ss_pred             CcccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .+|.+.+.||+|+||.||+|...      ++..+|+|.+........+.+.+|+++++.++|+||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            45677788999999999999742      355799999886665556678999999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeE
Q 018244          131 VAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR  196 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~k  196 (359)
                      ||||+++++|.+++....              ...+++..++.++.|++.||+|||++ +++|+||||+||++++++.++
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~Nil~~~~~~~~  163 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ-HFVHRDLATRNCLVGANLLVK  163 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccCcceEEEccCCcEE
Confidence            999999999999986422              23489999999999999999999999 999999999999999999999


Q ss_pred             EeccCCcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhc
Q 018244          197 LSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLT  269 (359)
Q Consensus       197 l~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~  269 (359)
                      |+|||++......      ....++..|+|||.+.+..++.++||||||+++|+|+| |..|+.........+....   
T Consensus       164 l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~---  240 (291)
T cd05094         164 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ---  240 (291)
T ss_pred             ECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhC---
Confidence            9999998754332      22345678999999998889999999999999999999 8887655433222221111   


Q ss_pred             cccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       270 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                        ......+...+..+.+++.+||+.||++|||+.++++.|+.+.+
T Consensus       241 --~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         241 --GRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             --CCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence              11112233456789999999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=4.8e-44  Score=333.22  Aligned_cols=248  Identities=16%  Similarity=0.139  Sum_probs=203.6

Q ss_pred             cCCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        54 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      ....+|.+++.||+|+||.||+|.. .++..||+|++....   ......+.+|+.+++.++||||+++++++.++...+
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~  119 (370)
T cd05596          40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY  119 (370)
T ss_pred             CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            4556788999999999999999985 468899999996432   123345778999999999999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +||||+++|+|.+++.   ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++......
T Consensus       120 lv~Ey~~gg~L~~~l~---~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~  195 (370)
T cd05596         120 MVMEYMPGGDLVNLMS---NYDIPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN  195 (370)
T ss_pred             EEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence            9999999999999884   34588999999999999999999999 9999999999999999999999999998765432


Q ss_pred             -----CCcCCCccccCcccccCC----CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCC--
Q 018244          210 -----RSYSTNLAFTPPEYLRTG----RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS--  278 (359)
Q Consensus       210 -----~~~~~t~~y~aPE~~~~~----~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--  278 (359)
                           ....||+.|+|||++.+.    .++.++|||||||++|+|++|..||.............    .......++  
T Consensus       196 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~----~~~~~~~~~~~  271 (370)
T cd05596         196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM----DHKNSLTFPDD  271 (370)
T ss_pred             CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHH----cCCCcCCCCCc
Confidence                 234689999999998753    37889999999999999999999987654432222211    111111122  


Q ss_pred             hHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 018244          279 SDEGTELVRLASRCLQYEPRE--RPNPRSLVTA  309 (359)
Q Consensus       279 ~~~~~~l~~li~~cl~~dp~~--Rps~~~il~~  309 (359)
                      ...+.++.+|+.+||+.+|++  |+|+.+++++
T Consensus       272 ~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         272 IEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             CCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence            245788999999999999988  9999999875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=9.9e-44  Score=319.08  Aligned_cols=242  Identities=19%  Similarity=0.247  Sum_probs=195.7

Q ss_pred             CCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc---hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCH
Q 018244           65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (359)
Q Consensus        65 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL  140 (359)
                      ||+|+||+||++.. .+++.+|+|.+......   ..+.+..|+++++.++|+||+++.+++......++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            59999999999984 46889999998754322   234567899999999999999999999999999999999999999


Q ss_pred             hhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----CcCC
Q 018244          141 AKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----SYST  214 (359)
Q Consensus       141 ~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----~~~~  214 (359)
                      .+++...  ....+++..+..++.||+.||.|||++ +++||||||+||++++++.++|+|||++.......    ...|
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g  159 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR-RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAG  159 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCC
Confidence            8877432  345689999999999999999999999 99999999999999999999999999987654332    3467


Q ss_pred             CccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcc
Q 018244          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ  294 (359)
Q Consensus       215 t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  294 (359)
                      |+.|+|||.+.+..++.++||||||+++|+|++|+.||...................  ....+...+.++.+++.+||+
T Consensus       160 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~  237 (280)
T cd05608         160 TPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLA  237 (280)
T ss_pred             CcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhc
Confidence            899999999999999999999999999999999999886542211111111111111  112344567889999999999


Q ss_pred             cCCCCCC-----CHHHHHHH
Q 018244          295 YEPRERP-----NPRSLVTA  309 (359)
Q Consensus       295 ~dp~~Rp-----s~~~il~~  309 (359)
                      .||++||     ++++++++
T Consensus       238 ~~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         238 KDPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             CCHHHhcCCCCCCHHHHhcC
Confidence            9999999     66666653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.9e-44  Score=335.06  Aligned_cols=246  Identities=16%  Similarity=0.112  Sum_probs=198.0

Q ss_pred             cccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      +|.+++.||.|+||+||+|. ..+++.||||++....   ....+.+.+|+++++.++||||+++++++.+....|+|||
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E   81 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME   81 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence            56788889999999999998 4578899999986532   1224567889999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |+++|+|.+++.  ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....    
T Consensus        82 ~~~gg~L~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~-givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~  158 (377)
T cd05629          82 FLPGGDLMTMLI--KYDTFSEDVTRFYMAECVLAIEAVHKL-GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA  158 (377)
T ss_pred             CCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence            999999999986  345689999999999999999999999 9999999999999999999999999998632110    


Q ss_pred             -----------------------------------------------CCcCCCccccCcccccCCCCCCccchhhHHHHH
Q 018244          210 -----------------------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLL  242 (359)
Q Consensus       210 -----------------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il  242 (359)
                                                                     ....||+.|+|||++.+..++.++|||||||++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil  238 (377)
T cd05629         159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM  238 (377)
T ss_pred             cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence                                                           023588999999999988899999999999999


Q ss_pred             HHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCC---CCHHHHHHH
Q 018244          243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER---PNPRSLVTA  309 (359)
Q Consensus       243 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R---ps~~~il~~  309 (359)
                      |||++|..||.............. ... ..........+.++.+|+.+||. +|.+|   +|+.+++.+
T Consensus       239 ~elltG~~Pf~~~~~~~~~~~i~~-~~~-~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h  305 (377)
T cd05629         239 FECLIGWPPFCSENSHETYRKIIN-WRE-TLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH  305 (377)
T ss_pred             hhhhcCCCCCCCCCHHHHHHHHHc-cCC-ccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence            999999999865433222111111 000 01101112356789999999997 77765   599998875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=4.1e-44  Score=335.52  Aligned_cols=246  Identities=17%  Similarity=0.157  Sum_probs=197.8

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      .|.+++.||+|+||+||+|.. .++..||+|.+.....   .....+.+|+.+++.++|+||+++++.+.+.+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            467888999999999999984 5688999999975421   224568889999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC-----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-----  208 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~-----  208 (359)
                      |+++|+|.+++.+  ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++.....     
T Consensus        82 ~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH~~-~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~  158 (382)
T cd05625          82 YIPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVHKM-GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK  158 (382)
T ss_pred             CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence            9999999999863  45689999999999999999999999 999999999999999999999999999753210     


Q ss_pred             ----------------------------------------------CCCcCCCccccCcccccCCCCCCccchhhHHHHH
Q 018244          209 ----------------------------------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLL  242 (359)
Q Consensus       209 ----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il  242 (359)
                                                                    .....||+.|+|||++.+..++.++|||||||++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil  238 (382)
T cd05625         159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL  238 (382)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence                                                          0123578999999999988999999999999999


Q ss_pred             HHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 018244          243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN---PRSLVTA  309 (359)
Q Consensus       243 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~il~~  309 (359)
                      |||++|+.||...............  ............++++.+++.+|+ .+|++|++   +.+++++
T Consensus       239 ~elltG~~Pf~~~~~~~~~~~i~~~--~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h  305 (382)
T cd05625         239 YEMLVGQPPFLAQTPLETQMKVINW--QTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH  305 (382)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcc--CCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence            9999999998765332221111110  011111112345678899998876 59999987   8877754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-44  Score=341.54  Aligned_cols=252  Identities=17%  Similarity=0.152  Sum_probs=210.1

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCC-cEEEEEEeCCCCCchHHHHHHHHHHHhcCC-Ccccccccce-eeeC------Cc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQ-FRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGC-CCEG------DE  127 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~-~~~~------~~  127 (359)
                      ....+.+.|.+|||+.||.|....+ ..+|+|++...+....+.+.+||++|+.|+ |+|||.+++. ....      -.
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E  116 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE  116 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence            3556778889999999999996554 899999999888788888999999999997 9999999993 3221      25


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      ++|.||||.||+|-+++..+....|++.++++|++|+++|+++||.. ..|||||||-+||||..+|..||||||.|...
T Consensus       117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~  196 (738)
T KOG1989|consen  117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTK  196 (738)
T ss_pred             EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccc
Confidence            78999999999999999877677799999999999999999999987 34999999999999999999999999998643


Q ss_pred             CCC--C-----------CcCCCccccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcc
Q 018244          207 RDG--R-----------SYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD  270 (359)
Q Consensus       207 ~~~--~-----------~~~~t~~y~aPE~~~---~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~  270 (359)
                      -..  .           ...+|+.|+|||++.   +...++|+|||||||+||-|+....||.....-.+.....     
T Consensus       197 ~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y-----  271 (738)
T KOG1989|consen  197 ILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNY-----  271 (738)
T ss_pred             cCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccc-----
Confidence            211  1           124689999999875   5679999999999999999999999997663322222222     


Q ss_pred             ccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          271 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       271 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                         .-...+..+..+.+||..||+.||++||++-+++..+-.+...
T Consensus       272 ---~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~  314 (738)
T KOG1989|consen  272 ---SFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK  314 (738)
T ss_pred             ---cCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence               1122357889999999999999999999999999998887653

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=4.8e-43  Score=311.58  Aligned_cols=249  Identities=23%  Similarity=0.333  Sum_probs=203.7

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      ..|.+.++||+|+||.||+|...++..||+|.+..... ..+.+.+|+++++.++|+||+++++++. ....++||||++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~   83 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS   83 (262)
T ss_pred             HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCC
Confidence            35788999999999999999976666799999985432 3457899999999999999999999874 456899999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----C
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S  211 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----~  211 (359)
                      +|+|.+++.......+++..+..++.|++.||+|||++ +++|+||||+||++++++.++|+|||.+.......     .
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~  162 (262)
T cd05071          84 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG  162 (262)
T ss_pred             CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcccEEEcCCCcEEeccCCceeeccccccccccC
Confidence            99999999754445689999999999999999999999 99999999999999999999999999987654332     2


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ..++..|+|||++.+..++.++||||||+++|+|+| |..||..............     ......+...+..+.+++.
T Consensus       163 ~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~  237 (262)
T cd05071         163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-----GYRMPCPPECPESLHDLMC  237 (262)
T ss_pred             CcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhc-----CCCCCCccccCHHHHHHHH
Confidence            234567999999988889999999999999999999 6666654433222211111     1111223456778999999


Q ss_pred             HhcccCCCCCCCHHHHHHHHHHh
Q 018244          291 RCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      +||+.||++|||+.++++.|+..
T Consensus       238 ~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         238 QCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             HHccCCcccCCCHHHHHHHHHHh
Confidence            99999999999999999998864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=7.4e-44  Score=326.10  Aligned_cols=237  Identities=17%  Similarity=0.236  Sum_probs=196.3

Q ss_pred             cCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEecCCCC
Q 018244           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      .||+|+||.||+|.. .++..||+|++....   ......+..|.+++..+ +||||+++++++...+..++||||+++|
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   81 (321)
T cd05591           2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG   81 (321)
T ss_pred             ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence            579999999999985 457899999997542   22344577888888876 7999999999999999999999999999


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CCcCC
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYST  214 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~~~~  214 (359)
                      +|..++.  ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++......    ....|
T Consensus        82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  158 (321)
T cd05591          82 DLMFQIQ--RSRKFDEPRSRFYAAEVTLALMFLHRH-GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCG  158 (321)
T ss_pred             cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEEeecccceecccCCcccccccc
Confidence            9999886  445789999999999999999999999 9999999999999999999999999998753222    23457


Q ss_pred             CccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcc
Q 018244          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ  294 (359)
Q Consensus       215 t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  294 (359)
                      |+.|+|||++.+..++.++||||||+++|+|++|+.||...............      ....+...+.++.+++.+||+
T Consensus       159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~ll~~~L~  232 (321)
T cd05591         159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD------DVLYPVWLSKEAVSILKAFMT  232 (321)
T ss_pred             CccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHhc
Confidence            89999999999888999999999999999999999998765443332222111      112234456789999999999


Q ss_pred             cCCCCCC-------CHHHHHHH
Q 018244          295 YEPRERP-------NPRSLVTA  309 (359)
Q Consensus       295 ~dp~~Rp-------s~~~il~~  309 (359)
                      .||++||       ++.+++++
T Consensus       233 ~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         233 KNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             cCHHHcCCCCCCCCCHHHHhcC
Confidence            9999999       77777754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=6.6e-44  Score=325.62  Aligned_cols=235  Identities=19%  Similarity=0.224  Sum_probs=194.0

Q ss_pred             cCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEecCCCC
Q 018244           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      .||+|+||.||+|.. .++..||+|.+....   .........|..++..+ +||||+++++++.+.+..++||||+.+|
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g   81 (316)
T cd05620           2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG   81 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence            579999999999995 468899999997542   12344567788888754 8999999999999999999999999999


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----CCCcCC
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----~~~~~~  214 (359)
                      +|.+++.  ....+++..+..++.|++.||+|||++ +++||||||+|||++.++.++|+|||+++....    .....|
T Consensus        82 ~L~~~i~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (316)
T cd05620          82 DLMFHIQ--DKGRFDLYRATFYAAEIVCGLQFLHSK-GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCG  158 (316)
T ss_pred             cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCC
Confidence            9999886  345689999999999999999999999 999999999999999999999999999875321    234568


Q ss_pred             CccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcc
Q 018244          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ  294 (359)
Q Consensus       215 t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  294 (359)
                      |+.|+|||++.+..++.++||||||+++|+|++|..||...............      ....+...+.++.+++.+||+
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~  232 (316)
T cd05620         159 TPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD------TPHYPRWITKESKDILEKLFE  232 (316)
T ss_pred             CcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHHHHcc
Confidence            99999999999889999999999999999999999998765443332221111      122334467789999999999


Q ss_pred             cCCCCCCCHH-HHH
Q 018244          295 YEPRERPNPR-SLV  307 (359)
Q Consensus       295 ~dp~~Rps~~-~il  307 (359)
                      .||++||++. +++
T Consensus       233 ~dP~~R~~~~~~~~  246 (316)
T cd05620         233 RDPTRRLGVVGNIR  246 (316)
T ss_pred             CCHHHcCCChHHHH
Confidence            9999999985 555

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=1.8e-43  Score=317.79  Aligned_cols=252  Identities=20%  Similarity=0.273  Sum_probs=204.4

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCCch-HHHHHHHHHHHhcCCCcccccccceeeeCCc
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDE  127 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  127 (359)
                      ++.+|++++.||.|+||.||+|...      .+..||+|++....... .+.+.+|+.++..++||||+++++++.....
T Consensus         3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~   82 (283)
T cd05091           3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP   82 (283)
T ss_pred             CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc
Confidence            3456788999999999999999853      24789999998654332 4568899999999999999999999999999


Q ss_pred             ceEEEecCCCCCHhhhhhcC--------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHW--------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV  193 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~  193 (359)
                      .++++||+.+++|.+++...              ....+++..+..++.|++.||.|||+. +++||||||+||++++++
T Consensus        83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~-gi~H~dlkp~Nil~~~~~  161 (283)
T cd05091          83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH-HVVHKDLATRNVLVFDKL  161 (283)
T ss_pred             eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc-CccccccchhheEecCCC
Confidence            99999999999999998521              123578889999999999999999999 999999999999999999


Q ss_pred             CeEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhh
Q 018244          194 NPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQ  266 (359)
Q Consensus       194 ~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~  266 (359)
                      .+||+|||+++......      ...+++.|+|||.+.++.++.++||||||+++|||++ |..|+............. 
T Consensus       162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~-  240 (283)
T cd05091         162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIR-  240 (283)
T ss_pred             ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-
Confidence            99999999987653322      2234678999999988889999999999999999998 666665443222221111 


Q ss_pred             hhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 018244          267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT  312 (359)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~  312 (359)
                         . ......+..++..+.+|+.+||+.+|++||++++|+..|+.
T Consensus       241 ---~-~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         241 ---N-RQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             ---c-CCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence               1 11122345577889999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=3.5e-43  Score=311.99  Aligned_cols=248  Identities=24%  Similarity=0.351  Sum_probs=204.6

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      .+|++++.||+|+||.||+|...++..+|+|.+..... ..+.+.+|+.+++.++|+|++++++++. ....+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~   83 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS   83 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence            35788889999999999999987878899999976543 3467899999999999999999999875 456899999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----C
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S  211 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----~  211 (359)
                      +++|.+++.......+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||++.......     .
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  162 (260)
T cd05070          84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM-NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQG  162 (260)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccC
Confidence            99999999754455689999999999999999999999 99999999999999999999999999987654322     1


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ..++..|+|||.+.+..++.++||||||+++|+|++ |..||.............     .......+...+..+.+|+.
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~  237 (260)
T cd05070         163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVE-----RGYRMPCPQDCPISLHELML  237 (260)
T ss_pred             CCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-----cCCCCCCCCcCCHHHHHHHH
Confidence            223567999999988889999999999999999999 777776543222221111     11122234456778999999


Q ss_pred             HhcccCCCCCCCHHHHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTALVT  312 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~L~~  312 (359)
                      +||..+|++|||+.++++.|+.
T Consensus       238 ~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         238 QCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHcccCcccCcCHHHHHHHHhc
Confidence            9999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=3.6e-43  Score=312.94  Aligned_cols=255  Identities=16%  Similarity=0.189  Sum_probs=207.3

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      .+|.+.+.||.|+||.||+|+. .++..||||.+....   ......+.+|+++++.++||||+++++++...+..++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            4677888899999999999994 578899999886432   222446788999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          133 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       133 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      ||+++++|.+++...  ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++.......
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~  160 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  160 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence            999999999888532  234588999999999999999999999 99999999999999999999999999987654332


Q ss_pred             ----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       211 ----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                          ...++..|+|||.+.+..++.++|+||||+++|+|++|+.|+.....+...  ....+.............+..+.
T Consensus       161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  238 (267)
T cd08228         161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFS--LCQKIEQCDYPPLPTEHYSEKLR  238 (267)
T ss_pred             HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHH--HHHHHhcCCCCCCChhhcCHHHH
Confidence                345778999999998888999999999999999999999988654322111  00111111111112234567899


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 018244          287 RLASRCLQYEPRERPNPRSLVTALVTLQ  314 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~L~~~~  314 (359)
                      +++.+||+.+|++|||+.++++.++++.
T Consensus       239 ~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         239 ELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             HHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            9999999999999999999999998863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=5e-44  Score=328.80  Aligned_cols=247  Identities=18%  Similarity=0.209  Sum_probs=198.3

Q ss_pred             cccccccCCCCCCcEEEEEEe----CCCcEEEEEEeCCCC----CchHHHHHHHHHHHhcC-CCcccccccceeeeCCcc
Q 018244           58 MENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSA----WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDER  128 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~  128 (359)
                      +|++++.||+|+||.||++..    .++..||+|++....    ....+.+.+|++++..+ +|+||+++++++...+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            367888899999999999874    357899999987532    12245678899999999 499999999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      ++||||+++|+|.+++.  ....+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++....
T Consensus        81 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~  157 (332)
T cd05614          81 HLILDYVSGGEMFTHLY--QRDNFSEDEVRFYSGEIILALEHLHKL-GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLS  157 (332)
T ss_pred             EEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHeEECCCCCEEEeeCcCCccccc
Confidence            99999999999999986  445689999999999999999999999 999999999999999999999999999876432


Q ss_pred             C-----CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHH
Q 018244          209 G-----RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       209 ~-----~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                      .     ....||..|+|||++.+. .++.++||||||+++|+|++|..||...............+..  .....+...+
T Consensus       158 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  235 (332)
T cd05614         158 EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK--CDPPFPSFIG  235 (332)
T ss_pred             cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--CCCCCCCCCC
Confidence            2     234689999999999865 4788999999999999999999988543211111111111111  1122344567


Q ss_pred             HHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 018244          283 TELVRLASRCLQYEPRERP-----NPRSLVTA  309 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rp-----s~~~il~~  309 (359)
                      ..+.+++.+||+.||++||     ++++++++
T Consensus       236 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  267 (332)
T cd05614         236 PEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH  267 (332)
T ss_pred             HHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence            7899999999999999999     67787764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=3e-44  Score=335.78  Aligned_cols=247  Identities=17%  Similarity=0.164  Sum_probs=199.9

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ++|.+++.||+|+||.||+|.. .+++.||+|++....   ......+.+|+++|+.++|+||+++++.+.+++.+++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            3678899999999999999984 568899999987532   122456788999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----  208 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----  208 (359)
                      ||+++|+|.+++.  ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++.....    
T Consensus        81 E~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~  157 (376)
T cd05598          81 DYIPGGDMMSLLI--RLGIFEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS  157 (376)
T ss_pred             eCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence            9999999999996  445689999999999999999999999 999999999999999999999999999743210    


Q ss_pred             -------------------------------------------CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHH
Q 018244          209 -------------------------------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL  245 (359)
Q Consensus       209 -------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el  245 (359)
                                                                 .....||+.|+|||++.+..++.++|||||||++|+|
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel  237 (376)
T cd05598         158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM  237 (376)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence                                                       0123588999999999988899999999999999999


Q ss_pred             HhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCC---CHHHHHHH
Q 018244          246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP---NPRSLVTA  309 (359)
Q Consensus       246 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~il~~  309 (359)
                      ++|+.||.............. . ............+.++.+++.+|+ .+|.+|+   |+.+++++
T Consensus       238 l~G~~Pf~~~~~~~~~~~i~~-~-~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         238 LVGQPPFLADTPAETQLKVIN-W-ETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             hhCCCCCCCCCHHHHHHHHhc-c-CccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence            999999876543222111110 0 001111112345678899999977 5999999   89999875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=2.1e-43  Score=330.91  Aligned_cols=254  Identities=20%  Similarity=0.282  Sum_probs=204.1

Q ss_pred             CcccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCC-CcccccccceeeeCCcc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLR-NRRLANLLGCCCEGDER  128 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~  128 (359)
                      ..|.+.+.||+|+||.||+|+..      .+..||||++...... ..+.+.+|+++|+.+. ||||+++++++...+..
T Consensus        37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~  116 (400)
T cd05105          37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPI  116 (400)
T ss_pred             cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCce
Confidence            35677888999999999999842      1346999999764332 2456899999999996 99999999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCC------------------------------------------------------------
Q 018244          129 LLVAEYMPNDTLAKHLFHWE------------------------------------------------------------  148 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~------------------------------------------------------------  148 (359)
                      +|||||+++|+|.+++....                                                            
T Consensus       117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (400)
T cd05105         117 YIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKE  196 (400)
T ss_pred             EEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhh
Confidence            99999999999999875421                                                            


Q ss_pred             ----------------------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCC
Q 018244          149 ----------------------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN  194 (359)
Q Consensus       149 ----------------------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~  194 (359)
                                                        ...+++..+..++.|++.||.|||++ +++|+||||+|||+++++.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivH~dikp~Nill~~~~~  275 (400)
T cd05105         197 ASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK-NCVHRDLAARNVLLAQGKI  275 (400)
T ss_pred             hhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChHhEEEeCCCE
Confidence                                              12478888999999999999999999 9999999999999999999


Q ss_pred             eEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhh
Q 018244          195 PRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQT  267 (359)
Q Consensus       195 ~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~  267 (359)
                      +||+|||+++......      ...++..|+|||.+.+..++.++||||||+++|+|++ |..|++....+......   
T Consensus       276 ~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~---  352 (400)
T cd05105         276 VKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNK---  352 (400)
T ss_pred             EEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHH---
Confidence            9999999987653322      2234578999999998889999999999999999997 88777654322111111   


Q ss_pred             hccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       268 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                       .........+...+.++.+++.+||+.||++|||+.++.+.|+++.+
T Consensus       353 -~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         353 -IKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             -HhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence             11111122334567789999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=3.7e-43  Score=311.78  Aligned_cols=248  Identities=23%  Similarity=0.337  Sum_probs=205.3

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      ..|+++++||+|+||.||+|...++..||+|.+..... ....+.+|+.+++.++|+||+++++++. .+..+++|||+.
T Consensus         6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~   83 (260)
T cd05067           6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYME   83 (260)
T ss_pred             HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCC
Confidence            35788899999999999999988888999999986543 3567899999999999999999999874 567899999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----C
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S  211 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----~  211 (359)
                      +++|.+++.......+++.++..++.|++.||+|||+. +++|+||||+||++++++.++|+|||++.......     .
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~-~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~  162 (260)
T cd05067          84 NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK-NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREG  162 (260)
T ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccC
Confidence            99999998755556789999999999999999999999 99999999999999999999999999987655221     2


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ..++..|+|||.+.+..++.++||||||+++|+|++ |+.||.............     .......+...+.++.+++.
T Consensus       163 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~  237 (260)
T cd05067         163 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLE-----RGYRMPRPDNCPEELYELMR  237 (260)
T ss_pred             CcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHH-----cCCCCCCCCCCCHHHHHHHH
Confidence            234568999999998889999999999999999999 888876543322221111     11111223445678999999


Q ss_pred             HhcccCCCCCCCHHHHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTALVT  312 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~L~~  312 (359)
                      +||+.+|++|||+++++..|+.
T Consensus       238 ~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         238 LCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHccCChhhCCCHHHHHHHhhc
Confidence            9999999999999999998875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.6e-43  Score=329.01  Aligned_cols=245  Identities=17%  Similarity=0.175  Sum_probs=195.0

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      .-..|.+++.||.|+||.||+|.. .++..||+|....      ..+.+|+++|+.++||||+++++++......++|+|
T Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e  163 (391)
T PHA03212         90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP  163 (391)
T ss_pred             ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEe
Confidence            345689999999999999999984 5688999997542      346789999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC-----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-----  208 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~-----  208 (359)
                      ++. ++|..++.  ....+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++.....     
T Consensus       164 ~~~-~~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~ylH~~-~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~  239 (391)
T PHA03212        164 RYK-TDLYCYLA--AKRNIAICDILAIERSVLRAIQYLHEN-RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANK  239 (391)
T ss_pred             cCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHhEEEcCCCCEEEEeCCcccccccccccc
Confidence            995 58888886  345689999999999999999999999 999999999999999999999999999875322     


Q ss_pred             CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchh--------HHHh---h--------------h
Q 018244          209 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL--------DLIR---D--------------R  263 (359)
Q Consensus       209 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~--------~~~~---~--------------~  263 (359)
                      .....||+.|+|||++.+..++.++|||||||++|+|++|..|+.....        ....   .              .
T Consensus       240 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~  319 (391)
T PHA03212        240 YYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQA  319 (391)
T ss_pred             cccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhH
Confidence            1234689999999999988899999999999999999999977643210        0000   0              0


Q ss_pred             hhh----hhccc--cccCCC-----ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          264 NIQ----TLTDS--CLEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       264 ~~~----~~~~~--~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ...    .....  ......     ....+.++.+|+.+||+.||++|||+.+++++
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h  376 (391)
T PHA03212        320 NLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF  376 (391)
T ss_pred             HHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence            000    00000  000000     01245689999999999999999999999964

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=5.9e-43  Score=311.58  Aligned_cols=249  Identities=22%  Similarity=0.312  Sum_probs=203.8

Q ss_pred             cccccccCCCCCCcEEEEEEeC----CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      +|.+.+.||+|+||+||+|.+.    +...||+|.+...... ....+.+|+.+++.++|+||+++++++...+..+++|
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~   84 (266)
T cd05033           5 YVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIIT   84 (266)
T ss_pred             HceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEE
Confidence            4667778899999999999864    2457999998754322 3456889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC--
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--  210 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~--  210 (359)
                      ||+++++|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||++.......  
T Consensus        85 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~  162 (266)
T cd05033          85 EYMENGSLDKFLRE-NDGKFTVGQLVGMLRGIASGMKYLSEM-NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEAT  162 (266)
T ss_pred             EcCCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCCEEECccchhhcccccccc
Confidence            99999999999864 334789999999999999999999999 99999999999999999999999999998764211  


Q ss_pred             ----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       211 ----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                          ...++..|+|||.+.+..++.++||||||+++|+|++ |..|+...............     .....+...+..+
T Consensus       163 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l  237 (266)
T cd05033         163 YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDG-----YRLPPPMDCPSAL  237 (266)
T ss_pred             eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHH
Confidence                1223567999999998889999999999999999998 88777544322222211111     1112234556789


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          286 VRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      .+++.+||+.+|++||++.++++.|..+
T Consensus       238 ~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         238 YQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             HHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            9999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=1.3e-43  Score=323.73  Aligned_cols=236  Identities=19%  Similarity=0.253  Sum_probs=193.0

Q ss_pred             cCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEecCCCC
Q 018244           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      .||+|+||.||+|.. .++..||+|++....   ....+.+..|..++..+ +||||+++++++...+..++||||+++|
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg   81 (316)
T cd05592           2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG   81 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence            579999999999995 457899999997532   12234456677777654 7999999999999999999999999999


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----CCCcCC
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----~~~~~~  214 (359)
                      +|.+++.  ....+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.....    .....|
T Consensus        82 ~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~g  158 (316)
T cd05592          82 DLMFHIQ--SSGRFDEARARFYAAEIICGLQFLHKK-GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCG  158 (316)
T ss_pred             cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccC
Confidence            9999886  345689999999999999999999999 999999999999999999999999999875432    223468


Q ss_pred             CccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcc
Q 018244          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ  294 (359)
Q Consensus       215 t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  294 (359)
                      |+.|+|||++.+..++.++|||||||++|+|++|..||..............      ....++...+.++.+++.+||+
T Consensus       159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~------~~~~~~~~~~~~~~~ll~~~l~  232 (316)
T cd05592         159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN------DRPHFPRWISKEAKDCLSKLFE  232 (316)
T ss_pred             CccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc------CCCCCCCCCCHHHHHHHHHHcc
Confidence            9999999999988899999999999999999999999876543332222111      1122344567789999999999


Q ss_pred             cCCCCCCCHH-HHHH
Q 018244          295 YEPRERPNPR-SLVT  308 (359)
Q Consensus       295 ~dp~~Rps~~-~il~  308 (359)
                      .||++||++. ++++
T Consensus       233 ~~P~~R~~~~~~l~~  247 (316)
T cd05592         233 RDPTKRLGVDGDIRQ  247 (316)
T ss_pred             CCHHHcCCChHHHHc
Confidence            9999999875 4544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=8.1e-44  Score=326.11  Aligned_cols=237  Identities=18%  Similarity=0.229  Sum_probs=196.6

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEE
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      +|++++.||+|+||.||+|.. .++..||+|.+.....   ...+.+..|..++..+ +|++|+++++++...+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            467788899999999999985 4578999999875421   2234567788888877 5899999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----  208 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----  208 (359)
                      ||+++|+|.+++.  ....+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||+++....    
T Consensus        81 E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~  157 (323)
T cd05616          81 EYVNGGDLMYQIQ--QVGRFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT  157 (323)
T ss_pred             cCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc
Confidence            9999999999886  345689999999999999999999999 999999999999999999999999999875432    


Q ss_pred             CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          209 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       209 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                      .....||+.|+|||++.+..++.++|||||||++|+|++|+.||..............    .  ...++...+.++.++
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~----~--~~~~p~~~s~~~~~l  231 (323)
T cd05616         158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME----H--NVAYPKSMSKEAVAI  231 (323)
T ss_pred             cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHh----C--CCCCCCcCCHHHHHH
Confidence            2245689999999999999999999999999999999999999876544333222211    1  122345567889999


Q ss_pred             HHHhcccCCCCCCCH
Q 018244          289 ASRCLQYEPRERPNP  303 (359)
Q Consensus       289 i~~cl~~dp~~Rps~  303 (359)
                      +.+||+.||++|++.
T Consensus       232 i~~~l~~~p~~R~~~  246 (323)
T cd05616         232 CKGLMTKHPGKRLGC  246 (323)
T ss_pred             HHHHcccCHHhcCCC
Confidence            999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=2.5e-43  Score=316.40  Aligned_cols=250  Identities=21%  Similarity=0.290  Sum_probs=203.8

Q ss_pred             CCcccccccCCCCCCcEEEEEEe------CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      +.++.+.++||+|+||.||++..      .++..+|+|.+..........+.+|+++++.++|+||+++++++......+
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL   83 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence            45677888999999999999963      235689999988766555678999999999999999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCC-------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeE
Q 018244          130 LVAEYMPNDTLAKHLFHWET-------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR  196 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~k  196 (359)
                      ++|||+++++|.+++.....             ..+++..+..++.|++.||+|||+. +++|+||||+||++++++.++
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-~i~H~dlkp~nil~~~~~~~k  162 (280)
T cd05092          84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL-HFVHRDLATRNCLVGQGLVVK  162 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC-CeecccccHhhEEEcCCCCEE
Confidence            99999999999999864321             3588999999999999999999999 999999999999999999999


Q ss_pred             EeccCCcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhc
Q 018244          197 LSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLT  269 (359)
Q Consensus       197 l~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~  269 (359)
                      |+|||++......      ....+++.|+|||.+.+..++.++||||||+++|+|++ |..||.............    
T Consensus       163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~----  238 (280)
T cd05092         163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT----  238 (280)
T ss_pred             ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH----
Confidence            9999998754322      12234578999999998889999999999999999998 777765432221111111    


Q ss_pred             cccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 018244          270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       270 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~  311 (359)
                      . ......+...+..+.+++.+||+.||++||++.++++.|+
T Consensus       239 ~-~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         239 Q-GRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             c-CccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            1 1111223445678999999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.3e-43  Score=326.65  Aligned_cols=248  Identities=19%  Similarity=0.275  Sum_probs=194.1

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeCC-----cce
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERL  129 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~  129 (359)
                      .|++.+.||+|+||.||+|.. .++..||||.+....  ......+.+|+++++.++||||+++++++....     ..+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            367888899999999999994 568899999987432  223456889999999999999999999885432     479


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +||||+. ++|.+++.  ....+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++.....
T Consensus        81 lv~e~~~-~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~  156 (338)
T cd07859          81 VVFELME-SDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVAFND  156 (338)
T ss_pred             EEEecCC-CCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence            9999995 58998886  345689999999999999999999999 9999999999999999999999999998754321


Q ss_pred             -------CCcCCCccccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhh------------------
Q 018244          210 -------RSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD------------------  262 (359)
Q Consensus       210 -------~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~------------------  262 (359)
                             ....+|..|+|||++.+  ..++.++|||||||++|+|++|+.||..........                  
T Consensus       157 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~  236 (338)
T cd07859         157 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVR  236 (338)
T ss_pred             cCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence                   23467899999999875  568999999999999999999998886543211100                  


Q ss_pred             -hhhhhhcc---ccccCC---CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          263 -RNIQTLTD---SCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       263 -~~~~~~~~---~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                       ........   ......   .....+.++.+++.+||+.||++|||+.+++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         237 NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence             00000000   000000   001245678999999999999999999999975

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=1.3e-43  Score=323.63  Aligned_cols=236  Identities=19%  Similarity=0.229  Sum_probs=193.6

Q ss_pred             cCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEecCCCC
Q 018244           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      .||+|+||+||+|.. .++..||+|.+....   .........|..++..+ +||||+++++++.+.+..++||||+++|
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g   81 (316)
T cd05619           2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG   81 (316)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence            579999999999995 457899999997542   12344566788888764 8999999999999999999999999999


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----CCCcCC
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----~~~~~~  214 (359)
                      +|.+++.  ....+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++.....    .....|
T Consensus        82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~LH~~-~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (316)
T cd05619          82 DLMFHIQ--SCHKFDLPRATFYAAEIICGLQFLHSK-GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCG  158 (316)
T ss_pred             cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecC
Confidence            9999986  345689999999999999999999999 999999999999999999999999999875322    223468


Q ss_pred             CccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcc
Q 018244          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ  294 (359)
Q Consensus       215 t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  294 (359)
                      |..|+|||++.+..++.++|||||||++|+|++|..||..............      ....++...+.++.+++.+||+
T Consensus       159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~------~~~~~~~~~~~~~~~li~~~l~  232 (316)
T cd05619         159 TPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRM------DNPCYPRWLTREAKDILVKLFV  232 (316)
T ss_pred             CccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh------CCCCCCccCCHHHHHHHHHHhc
Confidence            8999999999988899999999999999999999999876543322221111      0112334466789999999999


Q ss_pred             cCCCCCCCHH-HHHH
Q 018244          295 YEPRERPNPR-SLVT  308 (359)
Q Consensus       295 ~dp~~Rps~~-~il~  308 (359)
                      .||++||++. ++++
T Consensus       233 ~~P~~R~~~~~~l~~  247 (316)
T cd05619         233 REPERRLGVKGDIRQ  247 (316)
T ss_pred             cCHhhcCCChHHHHc
Confidence            9999999997 5544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=5.3e-43  Score=311.87  Aligned_cols=255  Identities=17%  Similarity=0.215  Sum_probs=208.3

Q ss_pred             CcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ..|.+.+.||.|++|.||+|. ..++..+|||.+.....   .....+.+|+.+++.++|+||+++++++..++..+++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            467788889999999999999 45788999998875322   23456889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          133 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       133 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      ||+++++|.+++...  ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++.......
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  160 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence            999999999988632  245689999999999999999999999 99999999999999999999999999987654332


Q ss_pred             ----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       211 ----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                          ...++..|+|||.+.+..++.++|+||||+++|+|++|..|+.....+....  ...+.............+..+.
T Consensus       161 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  238 (267)
T cd08229         161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--CKKIEQCDYPPLPSDHYSEELR  238 (267)
T ss_pred             cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHH--hhhhhcCCCCCCCcccccHHHH
Confidence                3457789999999998889999999999999999999999886543221111  0111111111112234677899


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 018244          287 RLASRCLQYEPRERPNPRSLVTALVTLQ  314 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~L~~~~  314 (359)
                      +++.+||+.||++|||+.+|++.++++.
T Consensus       239 ~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         239 QLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             HHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            9999999999999999999999988763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=3.6e-43  Score=323.37  Aligned_cols=253  Identities=21%  Similarity=0.305  Sum_probs=201.9

Q ss_pred             cccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcC-CCcccccccceeeeC-Ccc
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG-DER  128 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-~~~  128 (359)
                      .|++++.||.|+||.||+|...      +++.||+|++...... ..+.+.+|++++..+ +|+||+++++++... ..+
T Consensus         8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~   87 (337)
T cd05054           8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPL   87 (337)
T ss_pred             HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCE
Confidence            6788899999999999999632      2468999998754322 245678899999999 799999999988654 568


Q ss_pred             eEEEecCCCCCHhhhhhcCC-----------------------------------------------------------C
Q 018244          129 LLVAEYMPNDTLAKHLFHWE-----------------------------------------------------------T  149 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~-----------------------------------------------------------~  149 (359)
                      +++|||+++++|.+++....                                                           .
T Consensus        88 ~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (337)
T cd05054          88 MVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYK  167 (337)
T ss_pred             EEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhh
Confidence            89999999999999885321                                                           1


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC------CCcCCCccccCccc
Q 018244          150 QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEY  223 (359)
Q Consensus       150 ~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~  223 (359)
                      ..+++..+..++.||+.||.|||++ +|+||||||+||++++++.++|+|||++......      ....++..|+|||+
T Consensus       168 ~~l~~~~~~~~~~qi~~aL~~lH~~-~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~  246 (337)
T cd05054         168 EPLTLEDLISYSFQVARGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPES  246 (337)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHH
Confidence            2689999999999999999999999 9999999999999999999999999999865332      12334678999999


Q ss_pred             ccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCC
Q 018244          224 LRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN  302 (359)
Q Consensus       224 ~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps  302 (359)
                      +.+..++.++|||||||++|+|++ |..||............    .........+...+.++.+++.+||+.+|++|||
T Consensus       247 ~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs  322 (337)
T cd05054         247 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRR----LKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPT  322 (337)
T ss_pred             hcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHH----HhccCCCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence            999999999999999999999998 88877543221111111    1111111223445678999999999999999999


Q ss_pred             HHHHHHHHHHhhh
Q 018244          303 PRSLVTALVTLQK  315 (359)
Q Consensus       303 ~~~il~~L~~~~~  315 (359)
                      +.++++.|+++..
T Consensus       323 ~~ell~~l~~~~~  335 (337)
T cd05054         323 FSELVEILGDLLQ  335 (337)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.3e-43  Score=310.75  Aligned_cols=246  Identities=24%  Similarity=0.355  Sum_probs=201.8

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      .++.+.+.||+|+||.||+|.+.++..+|+|.+..... ....+.+|+++++.++|+||+++++++...+..++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA   82 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence            45678888999999999999987777899999875432 34568889999999999999999999999999999999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCC-----
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-----  211 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~-----  211 (359)
                      +++|.+++... ...+++..+..++.|++.||+|||+. +++|+||||+||++++++.+||+|||+++.......     
T Consensus        83 ~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~  160 (256)
T cd05059          83 NGCLLNYLRER-KGKLGTEWLLDMCSDVCEAMEYLESN-GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQG  160 (256)
T ss_pred             CCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC-CcccccccHhhEEECCCCcEEECCcccceecccccccccCC
Confidence            99999998642 34789999999999999999999999 999999999999999999999999999876543221     


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ..++..|+|||.+.+..++.++||||||+++|+|++ |..||.............     .......+...+.++.+++.
T Consensus       161 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~  235 (256)
T cd05059         161 TKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVS-----AGYRLYRPKLAPTEVYTIMY  235 (256)
T ss_pred             CCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH-----cCCcCCCCCCCCHHHHHHHH
Confidence            122357999999998889999999999999999999 676665432222211111     11112233446778999999


Q ss_pred             HhcccCCCCCCCHHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTAL  310 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~L  310 (359)
                      +||..+|++|||+.++++.|
T Consensus       236 ~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         236 SCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHhcCChhhCcCHHHHHHHh
Confidence            99999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=2.5e-43  Score=314.06  Aligned_cols=251  Identities=16%  Similarity=0.154  Sum_probs=202.9

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ...+|.+++.||+|+||.||+|+. .++..||+|++..........+.+|+.+++.++||||+++++++...+..++|||
T Consensus         7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e   86 (267)
T cd06646           7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME   86 (267)
T ss_pred             chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence            345788999999999999999994 5788999999976654556678899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |+++++|.+++.  ....+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++......    
T Consensus        87 ~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~  163 (267)
T cd06646          87 YCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLAYLHSK-GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKR  163 (267)
T ss_pred             CCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCCCEEECcCccceeeccccccc
Confidence            999999999886  345689999999999999999999999 9999999999999999999999999998765322    


Q ss_pred             CCcCCCccccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhh-hhhhccccccCCCChHHHHHH
Q 018244          210 RSYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-IQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~---~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l  285 (359)
                      ....++..|+|||.+.   ...++.++||||||+++|+|++|+.|+............ ......+.  .......+..+
T Consensus       164 ~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  241 (267)
T cd06646         164 KSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPK--LKDKTKWSSTF  241 (267)
T ss_pred             CccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCC--CccccccCHHH
Confidence            2345778999999885   344788999999999999999999887543211110000 00000010  01122356789


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHH
Q 018244          286 VRLASRCLQYEPRERPNPRSLVTAL  310 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~~~il~~L  310 (359)
                      .+++.+||+.+|++|||++++++.|
T Consensus       242 ~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         242 HNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             HHHHHHHhhCChhhCcCHHHHhcCC
Confidence            9999999999999999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=1.4e-43  Score=323.89  Aligned_cols=237  Identities=19%  Similarity=0.261  Sum_probs=196.6

Q ss_pred             cCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC---CchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEecCCCC
Q 018244           64 EHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      .||.|+||+||+|... ++..||+|.+....   ......+.+|+.++..+ +||||+++++++...+..++||||+++|
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~   81 (318)
T cd05570           2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG   81 (318)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence            5799999999999854 57899999998542   22345677889999888 6999999999999999999999999999


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CCcCC
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYST  214 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~~~~  214 (359)
                      +|..++.  ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||+++.....    ....|
T Consensus        82 ~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (318)
T cd05570          82 DLMFHIQ--RSGRFDEPRARFYAAEIVLGLQFLHER-GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCG  158 (318)
T ss_pred             CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceec
Confidence            9999886  345799999999999999999999999 9999999999999999999999999998653221    23457


Q ss_pred             CccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcc
Q 018244          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ  294 (359)
Q Consensus       215 t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  294 (359)
                      |..|+|||++.+..++.++|||||||++|+|++|..||..............    .  ...++...+..+.+|+.+||+
T Consensus       159 ~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~----~--~~~~~~~~~~~~~~li~~~l~  232 (318)
T cd05570         159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILE----D--EVRYPRWLSKEAKSILKSFLT  232 (318)
T ss_pred             CccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHc----C--CCCCCCcCCHHHHHHHHHHcc
Confidence            8999999999998999999999999999999999999876543332222111    1  112344567789999999999


Q ss_pred             cCCCCCCCH-----HHHHHH
Q 018244          295 YEPRERPNP-----RSLVTA  309 (359)
Q Consensus       295 ~dp~~Rps~-----~~il~~  309 (359)
                      .||++|||+     .+++++
T Consensus       233 ~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         233 KNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             CCHHHcCCCCCCCHHHHhcC
Confidence            999999999     777654

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=7.1e-43  Score=308.50  Aligned_cols=241  Identities=24%  Similarity=0.366  Sum_probs=196.1

Q ss_pred             cCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCHh
Q 018244           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA  141 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~  141 (359)
                      .||+|+||.||+|.. .+++.+|+|.+..... .....+.+|+++++.++||||+++++++......++||||+++++|.
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   81 (252)
T cd05084           2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL   81 (252)
T ss_pred             ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence            579999999999985 4788999998865432 23456899999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCC------cCCC
Q 018244          142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS------YSTN  215 (359)
Q Consensus       142 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~------~~~t  215 (359)
                      +++.. ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++........      ...+
T Consensus        82 ~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~  159 (252)
T cd05084          82 TFLRT-EGPRLKVKELIQMVENAAAGMEYLESK-HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIP  159 (252)
T ss_pred             HHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCc
Confidence            99864 344689999999999999999999999 999999999999999999999999999876443211      1123


Q ss_pred             ccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcc
Q 018244          216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ  294 (359)
Q Consensus       216 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  294 (359)
                      ..|+|||.+.++.++.++||||||+++|+|++ |..|+............     ........+...+..+.+++.+||+
T Consensus       160 ~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li~~~l~  234 (252)
T cd05084         160 VKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAI-----EQGVRLPCPELCPDAVYRLMERCWE  234 (252)
T ss_pred             eeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHH-----HcCCCCCCcccCCHHHHHHHHHHcC
Confidence            56999999998889999999999999999998 66655433222111111     1111222344556789999999999


Q ss_pred             cCCCCCCCHHHHHHHHH
Q 018244          295 YEPRERPNPRSLVTALV  311 (359)
Q Consensus       295 ~dp~~Rps~~~il~~L~  311 (359)
                      .+|++|||+.++++.|+
T Consensus       235 ~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         235 YDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             CChhhCcCHHHHHHHHh
Confidence            99999999999998875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=4.3e-44  Score=328.93  Aligned_cols=247  Identities=16%  Similarity=0.127  Sum_probs=201.4

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      +|.+++.||+|+||+||+|.. .++..||+|++.....   ...+.+.+|+.+++.++|+||+++++++.+.+..++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME   81 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence            577888899999999999984 4688999999985432   234567889999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC---
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~---  210 (359)
                      |+++|+|.+++.. ....+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++.......   
T Consensus        82 ~~~~~~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~lH~~-~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~  159 (330)
T cd05601          82 YQPGGDLLSLLNR-YEDQFDEDMAQFYLAELVLAIHSVHQM-GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN  159 (330)
T ss_pred             CCCCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence            9999999999964 335799999999999999999999999 99999999999999999999999999997654332   


Q ss_pred             --CcCCCccccCccccc------CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHH
Q 018244          211 --SYSTNLAFTPPEYLR------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       211 --~~~~t~~y~aPE~~~------~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                        ...+|+.|+|||++.      ...++.++||||||+++|+|++|..||...............  ............+
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~  237 (330)
T cd05601         160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNF--QRFLKFPEDPKVS  237 (330)
T ss_pred             eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcC--CCccCCCCCCCCC
Confidence              235789999999987      455789999999999999999999998765433222211111  0001111112456


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .++.+|+..||+ +|.+|||+.+++.+
T Consensus       238 ~~~~~li~~ll~-~p~~R~t~~~l~~h  263 (330)
T cd05601         238 SDFLDLIQSLLC-GQKERLGYEGLCCH  263 (330)
T ss_pred             HHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence            789999999998 99999999999864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=1.9e-43  Score=339.88  Aligned_cols=247  Identities=17%  Similarity=0.211  Sum_probs=204.2

Q ss_pred             CcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCC-------
Q 018244           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD-------  126 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-------  126 (359)
                      ..|.+.+.||+|+||+||+|. ..++..||||.+.....  .....+.+|+.++..++|+||+++++.+...+       
T Consensus        32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~  111 (496)
T PTZ00283         32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV  111 (496)
T ss_pred             CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence            477888889999999999998 45789999999976532  23456788999999999999999988775432       


Q ss_pred             -cceEEEecCCCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCc
Q 018244          127 -ERLLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (359)
Q Consensus       127 -~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a  203 (359)
                       .+++||||+++|+|.+++...  ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus       112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~-~IiHrDLKP~NILl~~~~~vkL~DFGls  190 (496)
T PTZ00283        112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK-HMIHRDIKSANILLCSNGLVKLGDFGFS  190 (496)
T ss_pred             eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEeCCCCEEEEecccC
Confidence             368999999999999998642  235689999999999999999999999 9999999999999999999999999998


Q ss_pred             ccCCC------CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCC
Q 018244          204 KNSRD------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF  277 (359)
Q Consensus       204 ~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (359)
                      +....      .....||+.|+|||++.+..++.++||||||+++|||++|+.||................     ....
T Consensus       191 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~-----~~~~  265 (496)
T PTZ00283        191 KMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGR-----YDPL  265 (496)
T ss_pred             eeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC-----CCCC
Confidence            76432      234568999999999999899999999999999999999999987654433322222111     1123


Q ss_pred             ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +...++++.+++.+||+.||++|||+.+++++
T Consensus       266 ~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        266 PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            45567889999999999999999999999864

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=1e-42  Score=312.34  Aligned_cols=253  Identities=18%  Similarity=0.246  Sum_probs=201.9

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCc----EEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .+|++++.||.|+||+||+|.+ .++.    .+|+|.+..... ....++..|+..+..+.||||+++++++. ....++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence            3567788899999999999985 3343    478888764432 22456778888999999999999999875 456789


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      ++||+++|+|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||++++++.+||+|||+++......
T Consensus        86 i~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~  163 (279)
T cd05111          86 VTQLSPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEH-RMVHRNLAARNILLKSDSIVQIADFGVADLLYPDD  163 (279)
T ss_pred             EEEeCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence            9999999999999964 345789999999999999999999999 99999999999999999999999999997653321


Q ss_pred             ------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       211 ------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                            ...++..|+|||.+.++.++.++||||||+++|||++ |..|+.........+.     .........+...+.
T Consensus       164 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  238 (279)
T cd05111         164 KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDL-----LEKGERLAQPQICTI  238 (279)
T ss_pred             cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-----HHCCCcCCCCCCCCH
Confidence                  2235678999999998889999999999999999998 8887765433222111     111111112233456


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT  317 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~  317 (359)
                      ++.+++.+||..||++|||+.++++.|..+.++.
T Consensus       239 ~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~  272 (279)
T cd05111         239 DVYMVMVKCWMIDENVRPTFKELANEFTRMARDP  272 (279)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence            7899999999999999999999999999876644

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-44  Score=327.85  Aligned_cols=244  Identities=20%  Similarity=0.233  Sum_probs=207.5

Q ss_pred             ccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCch---HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      |.-+..||.|+||.||-|. ..+...||||++.-+....   ...+..|+..|++++|||++.+.|+|......||||||
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence            4446677999999999998 5678899999998765444   45688999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCcCC
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST  214 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~  214 (359)
                      |-| |-.|++.- ...++.+..+..|+.+.++||+|||+. +.||||||+.|||+++.|.|||+|||.|....+.++++|
T Consensus       108 ClG-SAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~-~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvG  184 (948)
T KOG0577|consen  108 CLG-SASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSH-NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVG  184 (948)
T ss_pred             Hhc-cHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHh-hHHhhhccccceEecCCCeeeeccccchhhcCchhcccC
Confidence            965 78887743 456799999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             CccccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          215 NLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       215 t~~y~aPE~~~---~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      |+.|||||++.   .+.|+-++||||||++..||.-.++|.+..........+ ...-.+.   ....+++..+++++..
T Consensus       185 TPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHI-AQNesPt---Lqs~eWS~~F~~Fvd~  260 (948)
T KOG0577|consen  185 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI-AQNESPT---LQSNEWSDYFRNFVDS  260 (948)
T ss_pred             CccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHH-HhcCCCC---CCCchhHHHHHHHHHH
Confidence            99999999886   567999999999999999999999776654332221111 1111111   2256789999999999


Q ss_pred             hcccCCCCCCCHHHHHHH
Q 018244          292 CLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~  309 (359)
                      ||++-|.+|||.++++.+
T Consensus       261 CLqKipqeRptse~ll~H  278 (948)
T KOG0577|consen  261 CLQKIPQERPTSEELLKH  278 (948)
T ss_pred             HHhhCcccCCcHHHHhhc
Confidence            999999999999998863

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=4.5e-44  Score=327.12  Aligned_cols=234  Identities=17%  Similarity=0.193  Sum_probs=194.9

Q ss_pred             ccCCCCCCcEEEEEEe----CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           63 SEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      +.||+|+||.||++..    .+|..+|+|++......  ....+.+|+++|+.++||||+++++++...+..++||||+.
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5679999999999874    35789999999754322  23456789999999999999999999999999999999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CCc
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSY  212 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~~  212 (359)
                      +|+|.+++.  ....+++..+..++.||+.||.|||+. +++||||||+||++++++.+||+|||++......    ...
T Consensus        82 ~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~  158 (318)
T cd05582          82 GGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSL-GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF  158 (318)
T ss_pred             CCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence            999999986  445689999999999999999999999 9999999999999999999999999998765433    234


Q ss_pred             CCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHh
Q 018244          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC  292 (359)
Q Consensus       213 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  292 (359)
                      .||+.|+|||.+.+..++.++||||||+++|+|++|+.||..............    .  ....+...+.++.+|+.+|
T Consensus       159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~----~--~~~~p~~~~~~~~~li~~~  232 (318)
T cd05582         159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILK----A--KLGMPQFLSPEAQSLLRAL  232 (318)
T ss_pred             cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHc----C--CCCCCCCCCHHHHHHHHHH
Confidence            678999999999988899999999999999999999998876543322221111    1  1123445677899999999


Q ss_pred             cccCCCCCCCHHH
Q 018244          293 LQYEPRERPNPRS  305 (359)
Q Consensus       293 l~~dp~~Rps~~~  305 (359)
                      |+.||++|||+.+
T Consensus       233 l~~~P~~R~~a~~  245 (318)
T cd05582         233 FKRNPANRLGAGP  245 (318)
T ss_pred             hhcCHhHcCCCCC
Confidence            9999999999554

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1.5e-43  Score=329.60  Aligned_cols=249  Identities=16%  Similarity=0.142  Sum_probs=201.6

Q ss_pred             hcCCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcc
Q 018244           53 TSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (359)
Q Consensus        53 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  128 (359)
                      ......|++++.||+|+||.||+|.. .++..+|+|.+....   ......+.+|+.+++.++||||+++++++.++...
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL  118 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence            33446788999999999999999995 468899999986421   12344578899999999999999999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      ++||||+++|+|.+++.   ...+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||++.....
T Consensus       119 ~lv~Ey~~gg~L~~~l~---~~~~~~~~~~~~~~qil~aL~~LH~~-~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~  194 (370)
T cd05621         119 YMVMEYMPGGDLVNLMS---NYDVPEKWAKFYTAEVVLALDAIHSM-GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE  194 (370)
T ss_pred             EEEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEECCCCCEEEEecccceeccc
Confidence            99999999999999984   34589999999999999999999999 999999999999999999999999999986543


Q ss_pred             C-----CCcCCCccccCcccccCC----CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCC-
Q 018244          209 G-----RSYSTNLAFTPPEYLRTG----RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-  278 (359)
Q Consensus       209 ~-----~~~~~t~~y~aPE~~~~~----~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-  278 (359)
                      .     ....||+.|+|||++.+.    .++.++|||||||++|+|++|..||............    ........++ 
T Consensus       195 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i----~~~~~~~~~p~  270 (370)
T cd05621         195 TGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKI----MDHKNSLNFPE  270 (370)
T ss_pred             CCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHH----HhCCcccCCCC
Confidence            2     244689999999998754    3788999999999999999999998765433222221    1111111122 


Q ss_pred             -hHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 018244          279 -SDEGTELVRLASRCLQYEPRE--RPNPRSLVTA  309 (359)
Q Consensus       279 -~~~~~~l~~li~~cl~~dp~~--Rps~~~il~~  309 (359)
                       ...+..+.+++..||..++.+  |+|+.+++++
T Consensus       271 ~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         271 DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             cccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence             245778999999999865544  8899999886

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=1.7e-43  Score=324.78  Aligned_cols=241  Identities=16%  Similarity=0.224  Sum_probs=194.6

Q ss_pred             cCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEecCCCC
Q 018244           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      .||+|+||.||+|.. .++..||+|++....   ......+.+|..++..+ +||||+++++++...+..++||||+++|
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g   81 (329)
T cd05588           2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG   81 (329)
T ss_pred             eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            469999999999985 468899999998542   22345578899999998 6999999999999999999999999999


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----CCCcCC
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----~~~~~~  214 (359)
                      +|.+++.  ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++....    .....|
T Consensus        82 ~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  158 (329)
T cd05588          82 DLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHER-GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCG  158 (329)
T ss_pred             CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccC
Confidence            9998886  446799999999999999999999999 999999999999999999999999999875221    224568


Q ss_pred             CccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHH-----HhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       215 t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      |+.|+|||++.+..++.++||||||+++|+|++|+.||.......     ........+...  ....+...+.++.+++
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li  236 (329)
T cd05588         159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKASSVL  236 (329)
T ss_pred             CccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC--CCCCCCCCCHHHHHHH
Confidence            999999999998889999999999999999999999885321100     000011111111  1123455677899999


Q ss_pred             HHhcccCCCCCCC------HHHHHHH
Q 018244          290 SRCLQYEPRERPN------PRSLVTA  309 (359)
Q Consensus       290 ~~cl~~dp~~Rps------~~~il~~  309 (359)
                      .+||+.||.+|||      +.+++++
T Consensus       237 ~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05588         237 KGFLNKDPKERLGCHPQTGFRDIKSH  262 (329)
T ss_pred             HHHhccCHHHcCCCCCCCCHHHHhcC
Confidence            9999999999998      5666643

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=9.2e-43  Score=315.43  Aligned_cols=256  Identities=20%  Similarity=0.279  Sum_probs=205.6

Q ss_pred             CCcccccccCCCCCCcEEEEEEeC-CC--cEEEEEEeCCCC-CchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLE-NQ--FRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l  130 (359)
                      +++|.+.+.||.|+||.||+|... ++  ..+|+|.+.... ....+.+.+|++++.++ +||||+++++++......++
T Consensus         1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l   80 (297)
T cd05089           1 WEDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI   80 (297)
T ss_pred             CccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence            356788889999999999999854 33  347888887432 23345688999999999 79999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeE
Q 018244          131 VAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR  196 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~k  196 (359)
                      ++||+++++|.+++....              ...+++..+..++.|++.||+|||+. +++|+||||+|||+++++.+|
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~~~k  159 (297)
T cd05089          81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK-QFIHRDLAARNVLVGENLASK  159 (297)
T ss_pred             EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCcCCcceEEECCCCeEE
Confidence            999999999999986421              13588999999999999999999999 999999999999999999999


Q ss_pred             EeccCCcccCCCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhcccc
Q 018244          197 LSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSC  272 (359)
Q Consensus       197 l~DFg~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~  272 (359)
                      |+|||++......   .....+..|+|||++.+..++.++||||||+++|+|++ |..||..............     .
T Consensus       160 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~-----~  234 (297)
T cd05089         160 IADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-----G  234 (297)
T ss_pred             ECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc-----C
Confidence            9999998643321   11222457999999988889999999999999999997 8888765543332222111     1


Q ss_pred             ccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 018244          273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT  317 (359)
Q Consensus       273 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~  317 (359)
                      .....+...+..+.+|+.+||+.+|.+|||+.++++.|+.+....
T Consensus       235 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~  279 (297)
T cd05089         235 YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR  279 (297)
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            111223446678999999999999999999999999998887644

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1.6e-43  Score=324.11  Aligned_cols=232  Identities=20%  Similarity=0.230  Sum_probs=190.6

Q ss_pred             cCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHH-HHhcCCCcccccccceeeeCCcceEEEecCCCC
Q 018244           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      .||+|+||+||+|.. .++..||+|++.....   .....+.+|.. +++.++||||+++++++...+..++||||+.+|
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g   81 (323)
T cd05575           2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG   81 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence            479999999999995 4688999999975321   22334555554 567899999999999999999999999999999


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CCcCC
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYST  214 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~~~~  214 (359)
                      +|..++.  ....+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++.....    ....|
T Consensus        82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (323)
T cd05575          82 ELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCG  158 (323)
T ss_pred             CHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccC
Confidence            9999886  445789999999999999999999999 9999999999999999999999999998753221    23458


Q ss_pred             CccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcc
Q 018244          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ  294 (359)
Q Consensus       215 t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  294 (359)
                      |+.|+|||++.+..++.++||||||+++|+|++|..||................      ...+...+..+.+++.+||+
T Consensus       159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~~~li~~~l~  232 (323)
T cd05575         159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKP------LRLKPNISVSARHLLEGLLQ  232 (323)
T ss_pred             ChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC------CCCCCCCCHHHHHHHHHHhh
Confidence            899999999998889999999999999999999999987654433322222111      11233457789999999999


Q ss_pred             cCCCCCCCHH
Q 018244          295 YEPRERPNPR  304 (359)
Q Consensus       295 ~dp~~Rps~~  304 (359)
                      .||.+||++.
T Consensus       233 ~~p~~R~~~~  242 (323)
T cd05575         233 KDRTKRLGAK  242 (323)
T ss_pred             cCHHhCCCCC
Confidence            9999999985

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=6.7e-43  Score=314.20  Aligned_cols=254  Identities=20%  Similarity=0.306  Sum_probs=201.6

Q ss_pred             cccccccCCCCCCcEEEEEEe-----CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeee--CCcceE
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLL  130 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~l  130 (359)
                      .+++++.||+|+||.||+|..     .++..||+|.+........+.+.+|+++++.++||||+++++++..  ....++
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   84 (284)
T cd05081           5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL   84 (284)
T ss_pred             cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence            577888999999999999974     2578899999987665556678999999999999999999998754  346899


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      ||||+++++|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||++.......
T Consensus        85 v~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~aL~~LH~~-~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~  162 (284)
T cd05081          85 VMEYLPYGSLRDYLQK-HRERLDHRKLLLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKIGDFGLTKVLPQDK  162 (284)
T ss_pred             EEEecCCCCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHhhEEECCCCeEEECCCcccccccCCC
Confidence            9999999999999864 334689999999999999999999999 99999999999999999999999999988654332


Q ss_pred             C-------cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhh---h--------hhhhhcccc
Q 018244          211 S-------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---R--------NIQTLTDSC  272 (359)
Q Consensus       211 ~-------~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~---~--------~~~~~~~~~  272 (359)
                      .       ..++..|+|||++.+..++.++||||||+++|||++|..++..........   .        .........
T Consensus       163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (284)
T cd05081         163 EYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN  242 (284)
T ss_pred             cceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcC
Confidence            1       122345999999998889999999999999999999876543222111100   0        000111111


Q ss_pred             ccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       273 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      .....+...+.++.+|+.+||+.+|++|||+.++++.|+.+
T Consensus       243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         243 GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            11122344567899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=5.9e-43  Score=314.43  Aligned_cols=251  Identities=23%  Similarity=0.314  Sum_probs=199.8

Q ss_pred             cccccCCCCCCcEEEEEEe-----CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeC--CcceEE
Q 018244           60 NIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLV  131 (359)
Q Consensus        60 ~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv  131 (359)
                      .+++.||+|+||+||++..     .++..||+|.+..... .....+.+|+++|+.++||||+++++++...  ...+++
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            6788899999999988652     3577899999976532 2355688999999999999999999987653  357899


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-  210 (359)
                      |||+.+++|.+++.   ...+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||++....... 
T Consensus        87 ~e~~~~~~l~~~~~---~~~l~~~~~~~i~~~l~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~  162 (283)
T cd05080          87 MEYVPLGSLRDYLP---KHKLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE  162 (283)
T ss_pred             ecCCCCCCHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence            99999999999985   34699999999999999999999999 99999999999999999999999999988654322 


Q ss_pred             ------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHH--Hhh--------hhhhhhcccccc
Q 018244          211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL--IRD--------RNIQTLTDSCLE  274 (359)
Q Consensus       211 ------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~--~~~--------~~~~~~~~~~~~  274 (359)
                            ...++..|+|||.+.+..++.++||||||+++|+|+||..|+.......  ...        ............
T Consensus       163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (283)
T cd05080         163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR  242 (283)
T ss_pred             hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCC
Confidence                  1234567999999988889999999999999999999998764322110  000        001111111111


Q ss_pred             CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 018244          275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ  314 (359)
Q Consensus       275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~  314 (359)
                      ...+...+..+.+++.+||+.||++|||++++++.|+.+.
T Consensus       243 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         243 LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            2234456688999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=1.7e-43  Score=324.70  Aligned_cols=241  Identities=17%  Similarity=0.223  Sum_probs=193.9

Q ss_pred             cCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEecCCCC
Q 018244           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      .||+|+||.||+|.. .++..||+|++....   ......+.+|+.++..+ +||||+++++++...+..++||||+++|
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~   81 (329)
T cd05618           2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG   81 (329)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence            469999999999995 467899999998642   22345577889888777 7999999999999999999999999999


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----CCCcCC
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----~~~~~~  214 (359)
                      +|..++.  ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++....    .....|
T Consensus        82 ~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~g  158 (329)
T cd05618          82 DLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG  158 (329)
T ss_pred             CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccC
Confidence            9998886  445799999999999999999999999 999999999999999999999999999875322    223468


Q ss_pred             CccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhH-----HHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-----LIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       215 t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      |..|+|||++.+..++.++||||||+++|+|++|..||......     .........+...  ....+...+..+.+++
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~ll  236 (329)
T cd05618         159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKAASVL  236 (329)
T ss_pred             CccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC--CCCCCCCCCHHHHHHH
Confidence            99999999999889999999999999999999999988521100     0000011111111  1234556678899999


Q ss_pred             HHhcccCCCCCCCH------HHHHHH
Q 018244          290 SRCLQYEPRERPNP------RSLVTA  309 (359)
Q Consensus       290 ~~cl~~dp~~Rps~------~~il~~  309 (359)
                      .+||+.||++|||+      .+++++
T Consensus       237 ~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05618         237 KSFLNKDPKERLGCHPQTGFADIQGH  262 (329)
T ss_pred             HHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence            99999999999984      566543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=1e-42  Score=307.96  Aligned_cols=245  Identities=20%  Similarity=0.265  Sum_probs=205.2

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      |.+.+.||+|++|.||+|.. .++..|++|.+....  ......+.+|+++++.++||||+++++++...+..++||||+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA   81 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence            56677889999999999995 468899999987542  234567889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----C
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----~  211 (359)
                      ++++|.+++.......+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......    .
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~-~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~  160 (256)
T cd08529          82 ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT  160 (256)
T ss_pred             CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence            999999999765456799999999999999999999999 99999999999999999999999999988654432    2


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ..++..|+|||++.+..++.++|+||||+++|+|++|..||...............     .....+...+.++.+++.+
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~  235 (256)
T cd08529         161 IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRG-----VFPPVSQMYSQQLAQLIDQ  235 (256)
T ss_pred             cccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-----CCCCCccccCHHHHHHHHH
Confidence            35678999999999888999999999999999999999988655432222211111     1122233566789999999


Q ss_pred             hcccCCCCCCCHHHHHHH
Q 018244          292 CLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~  309 (359)
                      ||+.+|++||++.++++.
T Consensus       236 ~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         236 CLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             HccCCcccCcCHHHHhhC
Confidence            999999999999999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=8.3e-43  Score=308.85  Aligned_cols=249  Identities=25%  Similarity=0.351  Sum_probs=204.4

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceee-eCCcceEEEec
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCC-EGDERLLVAEY  134 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~  134 (359)
                      ..+|.+.+.||+|+||.||++... +..+|+|.+....  ..+.+.+|+.+++.++|+|++++++++. ..+..+++|||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   81 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence            456788889999999999999864 6679999987543  2456889999999999999999999764 45678999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-CcC
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-SYS  213 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-~~~  213 (359)
                      +++++|.+++.......+++..+..++.|++.||+|||++ +++|+||||+||++++++.+||+|||++....... ...
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~  160 (256)
T cd05082          82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK  160 (256)
T ss_pred             CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeccccchheEEEcCCCcEEecCCccceeccccCCCCc
Confidence            9999999999765555689999999999999999999999 99999999999999999999999999987654332 333


Q ss_pred             CCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHh
Q 018244          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC  292 (359)
Q Consensus       214 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  292 (359)
                      .+..|+|||++.+..++.++||||||+++|+|++ |+.|+..............     ......+...+..+.+++.+|
T Consensus       161 ~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~  235 (256)
T cd05082         161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-----GYKMDAPDGCPPVVYDVMKQC  235 (256)
T ss_pred             cceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-----CCCCCCCCCCCHHHHHHHHHH
Confidence            4568999999988889999999999999999998 8877765443332221111     111223345677899999999


Q ss_pred             cccCCCCCCCHHHHHHHHHHh
Q 018244          293 LQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       293 l~~dp~~Rps~~~il~~L~~~  313 (359)
                      |+.+|++|||+.++++.|+.+
T Consensus       236 l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         236 WHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             hcCChhhCcCHHHHHHHHhcC
Confidence            999999999999999988753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1e-42  Score=308.19  Aligned_cols=249  Identities=26%  Similarity=0.390  Sum_probs=207.8

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      .+|++.+.+|.|+||.||+|... +..||+|.+..... ..+++.+|+.+++.++|+||+++++++...+..++||||++
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   83 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA   83 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence            45677888899999999999875 67899999986653 46678999999999999999999999998899999999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCC-cCCC
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-YSTN  215 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~-~~~t  215 (359)
                      +++|.+++.......+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||.+........ ...+
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~  162 (256)
T cd05039          84 KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK-NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLP  162 (256)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccchhcccceEEEeCCCCEEEcccccccccccccccCCCc
Confidence            99999999755545799999999999999999999999 999999999999999999999999999887643322 2335


Q ss_pred             ccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcc
Q 018244          216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ  294 (359)
Q Consensus       216 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  294 (359)
                      ..|+|||.+.++.++.++||||||+++|++++ |..|+..............     ......+...++.+.+++.+||.
T Consensus       163 ~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~  237 (256)
T cd05039         163 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEK-----GYRMEAPEGCPPEVYKVMKDCWE  237 (256)
T ss_pred             ccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc-----CCCCCCccCCCHHHHHHHHHHhc
Confidence            67999999988889999999999999999997 8877765543332221111     11122234456789999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHh
Q 018244          295 YEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       295 ~dp~~Rps~~~il~~L~~~  313 (359)
                      .+|++|||+.++++.|+.+
T Consensus       238 ~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         238 LDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             cChhhCcCHHHHHHHHhcC
Confidence            9999999999999998753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=8.4e-43  Score=316.58  Aligned_cols=257  Identities=21%  Similarity=0.298  Sum_probs=204.9

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeC-CCc--EEEEEEeCCCCC-chHHHHHHHHHHHhcC-CCcccccccceeeeCCcce
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQF--RIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  129 (359)
                      .+.+|.+.+.||+|+||.||+|... ++.  .+|+|.+..... .....+.+|+.++.++ +|+||+++++++...+..+
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~   84 (303)
T cd05088           5 EWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY   84 (303)
T ss_pred             chhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence            3567788888999999999999853 443  468887765332 2345688899999999 8999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCe
Q 018244          130 LVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP  195 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~  195 (359)
                      +||||+++++|.+++....              ...+++..+..++.|++.||+|||++ +++||||||+|||+++++.+
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~dlkp~Nili~~~~~~  163 (303)
T cd05088          85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVA  163 (303)
T ss_pred             EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC-CccccccchheEEecCCCcE
Confidence            9999999999999986421              23578999999999999999999999 99999999999999999999


Q ss_pred             EEeccCCcccCCCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccc
Q 018244          196 RLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDS  271 (359)
Q Consensus       196 kl~DFg~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~  271 (359)
                      ||+|||++......   .....+..|+|||.+.+..++.++||||||+++|+|+| |..||............     ..
T Consensus       164 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-----~~  238 (303)
T cd05088         164 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-----PQ  238 (303)
T ss_pred             EeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHH-----hc
Confidence            99999998643221   11223567999999988889999999999999999998 88877644332222111     11


Q ss_pred             cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 018244          272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT  317 (359)
Q Consensus       272 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~  317 (359)
                      ......+...+.++.+|+.+||+.+|++|||+.+++..|..+....
T Consensus       239 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~  284 (303)
T cd05088         239 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  284 (303)
T ss_pred             CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            1111223345678999999999999999999999999998876544

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=2.4e-43  Score=312.71  Aligned_cols=239  Identities=24%  Similarity=0.374  Sum_probs=194.4

Q ss_pred             cCCCCCCcEEEEEEeCC--------CcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           64 EHGEKAPNVVYKGKLEN--------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .||.|+||.||+|....        ...+|+|.+........+.+.+|+.+++.++|||++++++++..+...++||||+
T Consensus         2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~   81 (258)
T cd05078           2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV   81 (258)
T ss_pred             CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence            57999999999998532        2358888887655445567889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCC--------eEEeccCCcccCC
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--------PRLSCFGLMKNSR  207 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~--------~kl~DFg~a~~~~  207 (359)
                      ++|+|.+++.. ....+++..+..++.||+.||+|||++ +++||||||+||+++.++.        ++++|||++....
T Consensus        82 ~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~  159 (258)
T cd05078          82 KFGSLDTYLKK-NKNLINISWKLEVAKQLAWALHFLEDK-GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL  159 (258)
T ss_pred             CCCcHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence            99999999864 344689999999999999999999999 9999999999999987765        6999999988776


Q ss_pred             CCCCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          208 DGRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       208 ~~~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                      ......++..|+|||++.+. .++.++||||||+++|+|++|..++...........    ....  ....+...+.++.
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~  233 (258)
T cd05078         160 PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ----FYED--RHQLPAPKWTELA  233 (258)
T ss_pred             CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH----HHHc--cccCCCCCcHHHH
Confidence            66666788999999999864 478999999999999999999644433211111110    1111  1123344557899


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHH
Q 018244          287 RLASRCLQYEPRERPNPRSLVTAL  310 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~L  310 (359)
                      +++.+||+.||++|||++++++.|
T Consensus       234 ~li~~~l~~~p~~Rps~~~il~~l  257 (258)
T cd05078         234 NLINQCMDYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             HHHHHHhccChhhCCCHHHHHHhc
Confidence            999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.1e-42  Score=309.29  Aligned_cols=238  Identities=19%  Similarity=0.343  Sum_probs=192.2

Q ss_pred             cCCCCCCcEEEEEEeCC-------------CcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           64 EHGEKAPNVVYKGKLEN-------------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .||+|+||.||+|.+..             ...||+|.+..........+.+|+.++..++||||+++++++......++
T Consensus         2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l   81 (262)
T cd05077           2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM   81 (262)
T ss_pred             ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence            57999999999998432             23689999876554445578889999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCC-------eEEeccCCc
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN-------PRLSCFGLM  203 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~-------~kl~DFg~a  203 (359)
                      ||||+++|+|..++.. ....+++..+..++.||+.||+|||++ +++||||||+|||++.++.       ++++|||++
T Consensus        82 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~  159 (262)
T cd05077          82 VEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDK-DLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP  159 (262)
T ss_pred             EEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhC-CeECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence            9999999999888753 345689999999999999999999999 9999999999999987654       899999998


Q ss_pred             ccCCCCCCcCCCccccCccccc-CCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHH
Q 018244          204 KNSRDGRSYSTNLAFTPPEYLR-TGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE  281 (359)
Q Consensus       204 ~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (359)
                      ..........++..|+|||.+. +..++.++||||||+++|+|++ |..|+..........     ......  ......
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-----~~~~~~--~~~~~~  232 (262)
T cd05077         160 ITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-----FYEGQC--MLVTPS  232 (262)
T ss_pred             ccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-----HHhcCc--cCCCCC
Confidence            8766656667888999999887 4568899999999999999984 666554432211111     001100  112234


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 018244          282 GTELVRLASRCLQYEPRERPNPRSLVTAL  310 (359)
Q Consensus       282 ~~~l~~li~~cl~~dp~~Rps~~~il~~L  310 (359)
                      +.++.+|+.+||+.||++||++.+|++.|
T Consensus       233 ~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         233 CKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             hHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            56799999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=1.6e-42  Score=307.85  Aligned_cols=247  Identities=22%  Similarity=0.322  Sum_probs=202.6

Q ss_pred             cccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCC
Q 018244           58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  137 (359)
                      .|.+...||.|++|.||+|....+..+|+|.+.... ...+.+.+|+++++.++|+|++++++++. .+..+++|||+.+
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~   84 (260)
T cd05069           7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGK   84 (260)
T ss_pred             HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCC
Confidence            467778899999999999997776679999887543 23456889999999999999999998875 4578999999999


Q ss_pred             CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----Cc
Q 018244          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----SY  212 (359)
Q Consensus       138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----~~  212 (359)
                      ++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++.......     ..
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~  163 (260)
T cd05069          85 GSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM-NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGA  163 (260)
T ss_pred             CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCC
Confidence            9999999754455689999999999999999999999 99999999999999999999999999997654322     22


Q ss_pred             CCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       213 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      .++..|+|||.+.+..++.++||||||+++|+|+| |..|+..............     ......+...+..+.+++.+
T Consensus       164 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~  238 (260)
T cd05069         164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVER-----GYRMPCPQGCPESLHELMKL  238 (260)
T ss_pred             ccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCcccCHHHHHHHHH
Confidence            34567999999988889999999999999999999 7777765433222211111     11122334567789999999


Q ss_pred             hcccCCCCCCCHHHHHHHHHH
Q 018244          292 CLQYEPRERPNPRSLVTALVT  312 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~L~~  312 (359)
                      ||..||++||+++++++.|+.
T Consensus       239 ~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         239 CWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HccCCcccCcCHHHHHHHHhc
Confidence            999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-42  Score=308.07  Aligned_cols=249  Identities=24%  Similarity=0.376  Sum_probs=207.2

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      .+|.+.+.||.|+||.||+|...++..+|||.+..... ..+.+.+|+.+++.++|+||+++++++......++||||++
T Consensus         6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   84 (261)
T cd05034           6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS   84 (261)
T ss_pred             hheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence            45678888999999999999987778899999986543 35678999999999999999999999998889999999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----C
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S  211 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----~  211 (359)
                      +++|.+++.......+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||++.......     .
T Consensus        85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~-~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~  163 (261)
T cd05034          85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR-NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREG  163 (261)
T ss_pred             CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhc
Confidence            99999999765556789999999999999999999999 99999999999999999999999999987654321     1


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ...+..|+|||.+.+..++.++||||||+++|+|++ |+.||...............     .....+...+.++.+++.
T Consensus       164 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~  238 (261)
T cd05034         164 AKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERG-----YRMPRPPNCPEELYDLML  238 (261)
T ss_pred             cCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHH
Confidence            223468999999998889999999999999999998 88877654332222211111     111223344678999999


Q ss_pred             HhcccCCCCCCCHHHHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTALVT  312 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~L~~  312 (359)
                      +||+.+|++||+++++++.|+.
T Consensus       239 ~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         239 QCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHcccCcccCCCHHHHHHHHhc
Confidence            9999999999999999998875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=1.2e-42  Score=308.01  Aligned_cols=241  Identities=20%  Similarity=0.259  Sum_probs=197.0

Q ss_pred             cCCCCCCcEEEEEEe---CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCC
Q 018244           64 EHGEKAPNVVYKGKL---ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      +||+|+||.||+|.+   .++..+|+|++......  ..+.+.+|+.+++.+.|+||+++++++. .+..++||||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            579999999999964   35788999998754322  3457889999999999999999999875 45779999999999


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-------C
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-------S  211 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-------~  211 (359)
                      +|.+++.  ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++.......       .
T Consensus        81 ~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  157 (257)
T cd05116          81 PLNKFLQ--KNKHVTEKNITELVHQVSMGMKYLEET-NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH  157 (257)
T ss_pred             cHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence            9999986  345689999999999999999999999 99999999999999999999999999987654322       1


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ..++..|+|||.+....++.++||||||+++|||++ |..||...........     +........+...+.++.+++.
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~-----i~~~~~~~~~~~~~~~l~~li~  232 (257)
T cd05116         158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQM-----IESGERMECPQRCPPEMYDLMK  232 (257)
T ss_pred             CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-----HHCCCCCCCCCCCCHHHHHHHH
Confidence            123468999999988889999999999999999998 8887765432222111     1111222344556788999999


Q ss_pred             HhcccCCCCCCCHHHHHHHHHHh
Q 018244          291 RCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      +||+.||++||++.+|...|++.
T Consensus       233 ~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         233 LCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             HHhccCchhCcCHHHHHHHHhcc
Confidence            99999999999999999998764

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=7.6e-43  Score=315.81  Aligned_cols=250  Identities=18%  Similarity=0.230  Sum_probs=207.9

Q ss_pred             hcCCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           53 TSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        53 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      .+....|.+++.||.|++|.||+|.. .++..||+|.+........+.+.+|+.+++.+.|+|++++++.+......++|
T Consensus        16 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv   95 (296)
T cd06654          16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV   95 (296)
T ss_pred             CCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence            34456788899999999999999984 56889999999876666667789999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--  209 (359)
                      |||+++++|.+++.   ...+++.++..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......  
T Consensus        96 ~e~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~-gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~  171 (296)
T cd06654          96 MEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  171 (296)
T ss_pred             ecccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence            99999999999984   34689999999999999999999999 9999999999999999999999999998764332  


Q ss_pred             --CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       210 --~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                        ....+++.|+|||.+.+..++.++||||||+++|+|++|+.||............   ..........+...+..+.+
T Consensus       172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~  248 (296)
T cd06654         172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI---ATNGTPELQNPEKLSAIFRD  248 (296)
T ss_pred             ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHH---hcCCCCCCCCccccCHHHHH
Confidence              2346788999999999888999999999999999999999988654321111111   11111111123456678999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ++.+||..||++|||+.++++.
T Consensus       249 li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         249 FLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             HHHHHCcCCcccCcCHHHHhhC
Confidence            9999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=1.7e-43  Score=328.80  Aligned_cols=195  Identities=18%  Similarity=0.194  Sum_probs=174.6

Q ss_pred             cccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-Cc-----ccccccceeeeCCcceE
Q 018244           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NR-----RLANLLGCCCEGDERLL  130 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~~~~~~~~~~~~~l  130 (359)
                      .|.+++.||+|+||.|.+|. .++++.||||+++... .-..+...|+.+|..|+ |.     |+|+++++|...+++||
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            56889999999999999998 5679999999998653 33556778999999997 53     89999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC--CCCeEEeccCCcccCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~--~~~~kl~DFg~a~~~~~  208 (359)
                      |+|.+.. +|.++++.++...++...++.++.||+.||.+||.. +|||+||||+||||.+  ...+||+|||.+.....
T Consensus       266 VfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l-~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q  343 (586)
T KOG0667|consen  266 VFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL-GIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ  343 (586)
T ss_pred             eehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCChhheeeccCCcCceeEEecccccccCC
Confidence            9999965 899999988888999999999999999999999999 9999999999999974  45799999999988765


Q ss_pred             CC-CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcc
Q 018244          209 GR-SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (359)
Q Consensus       209 ~~-~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~  255 (359)
                      .- .+.-+.-|+|||++.+.+|+.+.||||||||+.||++|.+.|+++
T Consensus       344 ~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~  391 (586)
T KOG0667|consen  344 RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD  391 (586)
T ss_pred             cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence            43 556678899999999999999999999999999999999888765

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=8.2e-43  Score=308.64  Aligned_cols=246  Identities=16%  Similarity=0.198  Sum_probs=205.3

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      +|.+.+.||.|+||.||++.. .++..+|+|.+.... ....+.+.+|+.+++.++|+||+++++.+...+..+++|||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            367788899999999999984 468899999986532 234567888999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----C
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----~  211 (359)
                      ++++|.+++.......+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||.+.......    .
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~  159 (255)
T cd08219          81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK-RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT  159 (255)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEECCCCcEEEcccCcceeeccccccccc
Confidence            999999988654556789999999999999999999999 99999999999999999999999999987654332    3


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ..++..|+|||++.+..++.++|+||||+++|+|++|..||...............     .....+...+..+.+++.+
T Consensus       160 ~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~  234 (255)
T cd08219         160 YVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQG-----SYKPLPSHYSYELRSLIKQ  234 (255)
T ss_pred             ccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcC-----CCCCCCcccCHHHHHHHHH
Confidence            45788899999999888999999999999999999999998765433222111111     1112234466789999999


Q ss_pred             hcccCCCCCCCHHHHHHH
Q 018244          292 CLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~  309 (359)
                      ||+.||++|||+.+++..
T Consensus       235 ~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         235 MFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHhCCcccCCCHHHHhhc
Confidence            999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1.9e-42  Score=310.45  Aligned_cols=253  Identities=20%  Similarity=0.277  Sum_probs=203.1

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCc----EEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .++++++.||.|+||+||+|.+ .++.    .||+|.+...... ....+.+|+.++..++|+||+++++++.. ...++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l   85 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL   85 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence            3567788889999999999984 3444    4899998754332 34568899999999999999999999865 45789


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      ++||+++|+|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+|||+++++.+||+|||+++......
T Consensus        86 ~~~~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~-~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~  163 (279)
T cd05109          86 VTQLMPYGCLLDYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEV-RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE  163 (279)
T ss_pred             EEEcCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccccceEEEcCCCcEEECCCCceeeccccc
Confidence            9999999999999864 345689999999999999999999999 99999999999999999999999999988654322


Q ss_pred             C------cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          211 S------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       211 ~------~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                      .      ..++..|+|||.+.+..++.++||||||+++|||++ |..|+..........     ..........+...+.
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  238 (279)
T cd05109         164 TEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPD-----LLEKGERLPQPPICTI  238 (279)
T ss_pred             ceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-----HHHCCCcCCCCccCCH
Confidence            1      223567999999998889999999999999999998 777765433222211     1111111222345667


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT  317 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~  317 (359)
                      ++.+++.+||+.||++|||+.++++.|+.+....
T Consensus       239 ~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         239 DVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence            8999999999999999999999999998876543

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=1.4e-43  Score=329.23  Aligned_cols=246  Identities=12%  Similarity=0.096  Sum_probs=198.1

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      +|++++.||+|+||.||+|.. .++..||+|++....   ......+.+|+.++..++|+||+++++.+.+.+..++|||
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E   81 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME   81 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            567888899999999999985 468899999997432   2234567889999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |+++|+|.+++.  ....+++..+..++.|++.||.|||++ +++||||||+|||++.++.++|+|||++......    
T Consensus        82 ~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~~L~~lH~~-givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~  158 (360)
T cd05627          82 FLPGGDMMTLLM--KKDTLSEEATQFYIAETVLAIDAIHQL-GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE  158 (360)
T ss_pred             CCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence            999999999986  445789999999999999999999999 9999999999999999999999999998643211    


Q ss_pred             -----------------------------------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCc
Q 018244          210 -----------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (359)
Q Consensus       210 -----------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~  254 (359)
                                                         ....||+.|+|||++.+..++.++|||||||++|||++|..||..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~  238 (360)
T cd05627         159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (360)
T ss_pred             cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence                                               123588999999999988999999999999999999999999876


Q ss_pred             chhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 018244          255 HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN---PRSLVTA  309 (359)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~il~~  309 (359)
                      ............. . ...........+.++.+|+.+++. ||.+|++   +.+++++
T Consensus       239 ~~~~~~~~~i~~~-~-~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h  293 (360)
T cd05627         239 ETPQETYRKVMNW-K-ETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH  293 (360)
T ss_pred             CCHHHHHHHHHcC-C-CceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence            5433322221110 0 000000112356789999999874 9999985   5666654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=3e-43  Score=334.45  Aligned_cols=247  Identities=21%  Similarity=0.262  Sum_probs=192.4

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeC--------Cc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG--------DE  127 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--------~~  127 (359)
                      ..|.+.+.||+|+||.||+|.. .++..||||++....    ....+|+.+|+.++|+||+++++++...        ..
T Consensus        66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  141 (440)
T PTZ00036         66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF  141 (440)
T ss_pred             CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence            4688889999999999999985 568899999886532    2345799999999999999998877432        24


Q ss_pred             ceEEEecCCCCCHhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC-CeEEeccCCcc
Q 018244          128 RLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMK  204 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~-~~kl~DFg~a~  204 (359)
                      +++||||+++ +|.+++..  .....+++..+..++.||+.||+|||+. +|+||||||+|||++.++ .+||+|||+++
T Consensus       142 l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~-~IiHrDLKp~NILl~~~~~~vkL~DFGla~  219 (440)
T PTZ00036        142 LNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK-FICHRDLKPQNLLIDPNTHTLKLCDFGSAK  219 (440)
T ss_pred             EEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCcCHHHEEEcCCCCceeeeccccch
Confidence            6799999976 67776643  2456789999999999999999999999 999999999999999654 79999999998


Q ss_pred             cCCCC---CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhc-----------
Q 018244          205 NSRDG---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT-----------  269 (359)
Q Consensus       205 ~~~~~---~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~-----------  269 (359)
                      .....   ....+|+.|+|||++.+. .++.++|||||||++|+|++|..||...............+.           
T Consensus       220 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  299 (440)
T PTZ00036        220 NLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMN  299 (440)
T ss_pred             hccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhc
Confidence            65433   245678999999998764 689999999999999999999998876432211111111000           


Q ss_pred             ------------cccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          270 ------------DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       270 ------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                  ...+...++...+.++.+|+.+||..||.+|||+.+++++
T Consensus       300 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h  351 (440)
T PTZ00036        300 PNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD  351 (440)
T ss_pred             hhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence                        0001111223356789999999999999999999999865

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=1.1e-42  Score=311.83  Aligned_cols=248  Identities=21%  Similarity=0.340  Sum_probs=199.2

Q ss_pred             cccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      +|++.+.||+|+||.||+|...      .+..||+|.+..... .....+.+|+.+++.++|+||+++++++......++
T Consensus         7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~l   86 (277)
T cd05062           7 KITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV   86 (277)
T ss_pred             HceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEE
Confidence            4677788899999999999743      256799999865332 234568899999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCC
Q 018244          131 VAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~  202 (359)
                      ||||+++++|.+++....        ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||+
T Consensus        87 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~vH~dlkp~Nil~~~~~~~~l~dfg~  165 (277)
T cd05062          87 IMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGM  165 (277)
T ss_pred             EEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCcchheEEEcCCCCEEECCCCC
Confidence            999999999999986421        23467889999999999999999999 999999999999999999999999999


Q ss_pred             cccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccC
Q 018244          203 MKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEG  275 (359)
Q Consensus       203 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  275 (359)
                      +.......      ...++..|+|||.+.+..++.++||||||+++|+|++ |..|+..............    . ...
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~----~-~~~  240 (277)
T cd05062         166 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVME----G-GLL  240 (277)
T ss_pred             ccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc----C-CcC
Confidence            87543221      2234678999999998889999999999999999999 5666655433222211111    1 111


Q ss_pred             CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 018244          276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~  311 (359)
                      ..+...+..+.+++.+||+.||++|||+.++++.|+
T Consensus       241 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         241 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            223445678999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=1.9e-43  Score=323.99  Aligned_cols=235  Identities=17%  Similarity=0.193  Sum_probs=191.8

Q ss_pred             cCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHH-HHhcCCCcccccccceeeeCCcceEEEecCCCC
Q 018244           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      .||+|+||+||+|.. .+|..+|+|++....   ......+..|.. +++.++||||+++++++...+..++||||+.+|
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~   81 (325)
T cd05604           2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG   81 (325)
T ss_pred             ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence            579999999999984 568899999997532   122334555554 567789999999999999999999999999999


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----CCCcCC
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----~~~~~~  214 (359)
                      +|..++.  ....+++..+..++.||+.||.|||++ |++||||||+|||+++++.+||+|||+++....    .....|
T Consensus        82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~-givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g  158 (325)
T cd05604          82 ELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSI-NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCG  158 (325)
T ss_pred             CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccC
Confidence            9998886  456789999999999999999999999 999999999999999999999999999875322    223468


Q ss_pred             CccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcc
Q 018244          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ  294 (359)
Q Consensus       215 t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  294 (359)
                      |+.|+|||++.+..++.++|||||||++|+|++|..||................      .......+..+.+++.+||+
T Consensus       159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ll~~ll~  232 (325)
T cd05604         159 TPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP------LVLRPGASLTAWSILEELLE  232 (325)
T ss_pred             ChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCC------ccCCCCCCHHHHHHHHHHhc
Confidence            899999999999899999999999999999999999987654433322222111      11223456789999999999


Q ss_pred             cCCCCCCCHHHHH
Q 018244          295 YEPRERPNPRSLV  307 (359)
Q Consensus       295 ~dp~~Rps~~~il  307 (359)
                      .||.+||++.+.+
T Consensus       233 ~~p~~R~~~~~~~  245 (325)
T cd05604         233 KDRQRRLGAKEDF  245 (325)
T ss_pred             cCHHhcCCCCCCH
Confidence            9999999886433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=3e-43  Score=322.61  Aligned_cols=235  Identities=20%  Similarity=0.211  Sum_probs=190.9

Q ss_pred             cCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHH-HHHhcCCCcccccccceeeeCCcceEEEecCCCC
Q 018244           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEA-RAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~-~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      .||+|+||+||+|.. .++..||+|++.....   .....+.+|. .+++.++|+||+++++++...+..++||||+++|
T Consensus         2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~   81 (325)
T cd05602           2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG   81 (325)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence            579999999999995 4678899999975321   1223344444 4567889999999999999999999999999999


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----CCCcCC
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----~~~~~~  214 (359)
                      +|.+++.  ....+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++....    .....|
T Consensus        82 ~L~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~-giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~g  158 (325)
T cd05602          82 ELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCG  158 (325)
T ss_pred             cHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccC
Confidence            9999986  345688899999999999999999999 999999999999999999999999999875322    223468


Q ss_pred             CccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcc
Q 018244          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ  294 (359)
Q Consensus       215 t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  294 (359)
                      |+.|+|||++.+..++.++||||||+++|+|++|..||...............      ....+...+..+.+++.+||+
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~  232 (325)
T cd05602         159 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------PLQLKPNITNSARHLLEGLLQ  232 (325)
T ss_pred             CccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC------CcCCCCCCCHHHHHHHHHHcc
Confidence            99999999999888999999999999999999999998765433322222111      112234567789999999999


Q ss_pred             cCCCCCCCHHHHH
Q 018244          295 YEPRERPNPRSLV  307 (359)
Q Consensus       295 ~dp~~Rps~~~il  307 (359)
                      .||.+||++.+.+
T Consensus       233 ~~p~~R~~~~~~~  245 (325)
T cd05602         233 KDRTKRLGAKDDF  245 (325)
T ss_pred             cCHHHCCCCCCCH
Confidence            9999999987544

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=1e-43  Score=297.42  Aligned_cols=289  Identities=18%  Similarity=0.232  Sum_probs=226.9

Q ss_pred             CcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEEEe
Q 018244           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      .+.+.++.||.|+.|.|++++ ...|...|||.+.+... +..++++..+.++..-. +|.||+.+|||..+..++|.||
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe  171 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME  171 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence            445678889999999999999 45689999999987643 34566788888777664 8999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---C
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---R  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---~  210 (359)
                      .|.. .+..++++ -.+++++..+-++...++.||.||..+++|+|||+||+|||+|+.|++||||||++...-+.   .
T Consensus       172 lMs~-C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAht  249 (391)
T KOG0983|consen  172 LMST-CAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHT  249 (391)
T ss_pred             HHHH-HHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccccc
Confidence            9844 56666654 56679999999999999999999999889999999999999999999999999999876543   3


Q ss_pred             CcCCCccccCcccccC---CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~---~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                      ...|-+.|||||.+.-   ..|+..+||||||++++||.||+.|+.....+...-.++..-..+.++.  ...+++++++
T Consensus       250 rsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~--~~gFSp~F~~  327 (391)
T KOG0983|consen  250 RSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPG--HMGFSPDFQS  327 (391)
T ss_pred             cccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCc--ccCcCHHHHH
Confidence            4567889999999874   3589999999999999999999999988655543333332222233332  2337899999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHHHhhhcccCCccccchhHHHHHHhhcccccccccccccccc
Q 018244          288 LASRCLQYEPRERPNPRSLVTALVTLQKDTEVSCFLFSSQFTYALLRLHIWSSSQIQQPARLCF  351 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (359)
                      ++..||++|+.+||...+++++  .+...-+........++.......+....++.....++++
T Consensus       328 fv~~CL~kd~r~RP~Y~~Ll~h--~Fi~~ye~a~~dVa~WF~dV~~~~~~~~~~~~~s~~~~p~  389 (391)
T KOG0983|consen  328 FVKDCLTKDHRKRPKYNKLLEH--PFIKRYETAEVDVASWFKDVMAKTESPRTSGVLSQPHLPF  389 (391)
T ss_pred             HHHHHhhcCcccCcchHHHhcC--cceeecchhhccHHHHHHHHHhcccccccCCcccCCCCcc
Confidence            9999999999999999999875  2222333334555677777776665566666555555554

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.1e-42  Score=314.21  Aligned_cols=251  Identities=22%  Similarity=0.310  Sum_probs=204.8

Q ss_pred             cccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcC-CCcccccccceeeeCCcce
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  129 (359)
                      +|.+.+.||+|+||.||++...      ....+|+|.+..... .....+.+|++++..+ +|+||+++++++......+
T Consensus        13 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~   92 (293)
T cd05053          13 RLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLY   92 (293)
T ss_pred             HeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeE
Confidence            4677888899999999999853      236799999875432 2345688999999999 7999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcC--------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCe
Q 018244          130 LVAEYMPNDTLAKHLFHW--------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP  195 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~  195 (359)
                      ++|||+++|+|.+++...              ....+++..+..++.|++.||.|||++ +++|+||||+||++++++.+
T Consensus        93 li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivH~dlkp~Nil~~~~~~~  171 (293)
T cd05053          93 VVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK-KCIHRDLAARNVLVTEDHVM  171 (293)
T ss_pred             EEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC-CccccccceeeEEEcCCCeE
Confidence            999999999999998642              235689999999999999999999999 99999999999999999999


Q ss_pred             EEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhh
Q 018244          196 RLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTL  268 (359)
Q Consensus       196 kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~  268 (359)
                      ||+|||+++......      ...++..|+|||.+.+..++.++||||||+++|+|++ |..|+..............  
T Consensus       172 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~--  249 (293)
T cd05053         172 KIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKE--  249 (293)
T ss_pred             EeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHc--
Confidence            999999988654322      1223567999999988889999999999999999998 8877765543332221111  


Q ss_pred             ccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 018244          269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ  314 (359)
Q Consensus       269 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~  314 (359)
                         ......+...+..+.+|+.+||+.||++|||+.++++.|+.+.
T Consensus       250 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         250 ---GYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             ---CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence               1112234455678999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.3e-42  Score=310.89  Aligned_cols=238  Identities=24%  Similarity=0.382  Sum_probs=190.9

Q ss_pred             cCCCCCCcEEEEEEeC-------------------------CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccc
Q 018244           64 EHGEKAPNVVYKGKLE-------------------------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANL  118 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~-------------------------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~  118 (359)
                      .||+|+||.||+|.+.                         ....||+|.+..........+.+|+.+++.++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            5799999999999741                         124689999876544445578889999999999999999


Q ss_pred             cceeeeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC-----
Q 018244          119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-----  193 (359)
Q Consensus       119 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~-----  193 (359)
                      ++++......++||||+++|+|..++.. ....+++..+..++.|++.||+|||++ +++||||||+||+++..+     
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~dlkp~Nill~~~~~~~~~  159 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDK-NLVHGNVCAKNILLARLGLAEGT  159 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcC-CccCCCCCcccEEEeccCcccCc
Confidence            9999999999999999999999988854 345789999999999999999999999 999999999999997643     


Q ss_pred             --CeEEeccCCcccCCCCCCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHH-hCCCCCCcchhHHHhhhhhhhhc
Q 018244          194 --NPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLL-SGKHIPPSHALDLIRDRNIQTLT  269 (359)
Q Consensus       194 --~~kl~DFg~a~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ell-tg~~p~~~~~~~~~~~~~~~~~~  269 (359)
                        .++++|||++..........++..|+|||.+.+ ..++.++||||||+++|||+ +|..|+..........     ..
T Consensus       160 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~-----~~  234 (274)
T cd05076         160 SPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKER-----FY  234 (274)
T ss_pred             cceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHH-----HH
Confidence              389999999876554455567889999998875 45889999999999999985 6777765432221111     11


Q ss_pred             cccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 018244          270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL  310 (359)
Q Consensus       270 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L  310 (359)
                      ..  ....+.....++.+++.+||+.+|++|||+.++++.|
T Consensus       235 ~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         235 EK--KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             Hh--ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            11  1112223346799999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=5.8e-43  Score=326.60  Aligned_cols=247  Identities=18%  Similarity=0.216  Sum_probs=195.9

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeCC-----cceE
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERLL  130 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~l  130 (359)
                      +++++.||+|+||.||+|.. .++..||+|.+....  ....+.+.+|+.+++.++|+||+++++++...+     ..++
T Consensus         2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l   81 (372)
T cd07853           2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV   81 (372)
T ss_pred             CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence            56778889999999999995 578899999987532  223467889999999999999999999998776     7899


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-  209 (359)
                      ||||+.+ +|.+.+.  ....+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||++...... 
T Consensus        82 v~e~~~~-~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~  157 (372)
T cd07853          82 VTELMQS-DLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSA-GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE  157 (372)
T ss_pred             Eeecccc-CHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChHHEEECCCCCEEeccccceeecccCc
Confidence            9999974 7888775  455799999999999999999999999 9999999999999999999999999998765432 


Q ss_pred             ----CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh------------------
Q 018244          210 ----RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ------------------  266 (359)
Q Consensus       210 ----~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~------------------  266 (359)
                          ....++..|+|||.+.+. .++.++|||||||++|||++|+.||..............                  
T Consensus       158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~  237 (372)
T cd07853         158 SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGAR  237 (372)
T ss_pred             cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHH
Confidence                123567899999998874 478999999999999999999998865432111110000                  


Q ss_pred             -hhccccccC-------CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          267 -TLTDSCLEG-------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       267 -~~~~~~~~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                       .+.......       ......++++.+|+.+||+.||++|||+.+++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         238 AHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             HHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence             000000000       1122346789999999999999999999999875

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=3.4e-42  Score=306.49  Aligned_cols=254  Identities=19%  Similarity=0.226  Sum_probs=207.6

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ..|.+.+.||.|+||.||+|... ++..||+|.++...   ....+.+.+|+++++.++|+|++++++++...+..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            35778888899999999999965 78899999886432   222457889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          133 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       133 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      ||+++++|.+++...  ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~  160 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK-RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  160 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecCCcChhhEEECCCCcEEEeccceeeeccCCC
Confidence            999999999988642  345689999999999999999999999 99999999999999999999999999987654322


Q ss_pred             ----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCC-hHHHHHH
Q 018244          211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-SDEGTEL  285 (359)
Q Consensus       211 ----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l  285 (359)
                          ...++..|+|||.+.+..++.++||||||+++|+|++|..|+..........  ...+... .....+ ...+.++
T Consensus       161 ~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~  237 (267)
T cd08224         161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--CKKIEKC-DYPPLPADHYSEEL  237 (267)
T ss_pred             cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHH--HhhhhcC-CCCCCChhhcCHHH
Confidence                2457788999999998889999999999999999999999886543221110  0001111 111122 2556789


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 018244          286 VRLASRCLQYEPRERPNPRSLVTALVTLQ  314 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~~~il~~L~~~~  314 (359)
                      .+++.+||..+|++|||+.++++.|+.+.
T Consensus       238 ~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         238 RDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             HHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            99999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=2.9e-42  Score=305.51  Aligned_cols=242  Identities=30%  Similarity=0.430  Sum_probs=203.1

Q ss_pred             cCCCCCCcEEEEEEeCC----CcEEEEEEeCCCCCch-HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCC
Q 018244           64 EHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      .||.|+||.||+|....    +..+|+|.+....... .+.+.+|++.+..++|+||+++++++......++||||++++
T Consensus         2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   81 (262)
T cd00192           2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGG   81 (262)
T ss_pred             ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCC
Confidence            57999999999999543    7889999998765433 567899999999999999999999999999999999999999


Q ss_pred             CHhhhhhcCC-------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--
Q 018244          139 TLAKHLFHWE-------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (359)
Q Consensus       139 sL~~~l~~~~-------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--  209 (359)
                      +|.+++....       ...+++..++.++.|++.||+|||++ +++|+||+|+||++++++.++|+|||.+......  
T Consensus        82 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~  160 (262)
T cd00192          82 DLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY  160 (262)
T ss_pred             cHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC-CcccCccCcceEEECCCCcEEEcccccccccccccc
Confidence            9999997531       36789999999999999999999999 9999999999999999999999999999876543  


Q ss_pred             ----CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHH
Q 018244          210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE  284 (359)
Q Consensus       210 ----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (359)
                          ....++..|+|||.+....++.++||||||+++|+|++ |..|+..............     ......+...+.+
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~  235 (262)
T cd00192         161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK-----GYRLPKPEYCPDE  235 (262)
T ss_pred             cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----CCCCCCCccCChH
Confidence                23456788999999988889999999999999999999 5777765533322222211     1122334556788


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHH
Q 018244          285 LVRLASRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       285 l~~li~~cl~~dp~~Rps~~~il~~L~  311 (359)
                      +.+++.+||+.||++|||+.++++.|+
T Consensus       236 ~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         236 LYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             HHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            999999999999999999999998763

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=5.2e-43  Score=320.68  Aligned_cols=237  Identities=17%  Similarity=0.232  Sum_probs=195.2

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEEEe
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      |++++.||+|+||+||+|.. .++..||+|++....   ....+.+..|..++..+. |++|+++++++...+..++|||
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME   81 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence            45667789999999999984 468899999997532   223455778899998886 5778889999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |+++|+|.+++.  ....+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||+++.....    
T Consensus        82 y~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~  158 (323)
T cd05615          82 YVNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRR-GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTT  158 (323)
T ss_pred             CCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEEeccccccccCCCCccc
Confidence            999999999986  445699999999999999999999999 9999999999999999999999999998754322    


Q ss_pred             CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ....||+.|+|||++.+..++.++||||||+++|+|++|..||..............    .  ....+...+.++.+++
T Consensus       159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~----~--~~~~p~~~~~~~~~li  232 (323)
T cd05615         159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME----H--NVSYPKSLSKEAVSIC  232 (323)
T ss_pred             cCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh----C--CCCCCccCCHHHHHHH
Confidence            234589999999999988899999999999999999999999876543332222211    1  1123445677899999


Q ss_pred             HHhcccCCCCCCCHH
Q 018244          290 SRCLQYEPRERPNPR  304 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~  304 (359)
                      .+||+.||.+|++..
T Consensus       233 ~~~l~~~p~~R~~~~  247 (323)
T cd05615         233 KGLMTKHPSKRLGCG  247 (323)
T ss_pred             HHHcccCHhhCCCCC
Confidence            999999999999853

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=1.9e-42  Score=312.59  Aligned_cols=257  Identities=17%  Similarity=0.197  Sum_probs=207.0

Q ss_pred             HHHHHhcCCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCC
Q 018244           48 TLRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD  126 (359)
Q Consensus        48 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~  126 (359)
                      +++..-.....|++++.||.|+||.||+|.. .++..+|+|.+........+.+.+|+.+++.++|+||+++++.+....
T Consensus         3 ~~~~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   82 (292)
T cd06644           3 HVRRDLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG   82 (292)
T ss_pred             hhhcccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC
Confidence            3444444556789999999999999999995 458899999998766555677889999999999999999999999999


Q ss_pred             cceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      ..++||||+++++|..++.+ ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++...
T Consensus        83 ~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~  160 (292)
T cd06644          83 KLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSM-KIIHRDLKAGNVLLTLDGDIKLADFGVSAKN  160 (292)
T ss_pred             eEEEEEecCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcC-CeeecCCCcceEEEcCCCCEEEccCccceec
Confidence            99999999999999888754 345689999999999999999999999 9999999999999999999999999987654


Q ss_pred             CCC----CCcCCCccccCcccccC-----CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCC
Q 018244          207 RDG----RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF  277 (359)
Q Consensus       207 ~~~----~~~~~t~~y~aPE~~~~-----~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (359)
                      ...    ....++..|+|||.+.+     ..++.++||||||+++|+|++|..|+.............. ...  .....
T Consensus       161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~--~~~~~  237 (292)
T cd06644         161 VKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK-SEP--PTLSQ  237 (292)
T ss_pred             cccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhc-CCC--ccCCC
Confidence            322    23456789999999853     3478899999999999999999988765432211111110 000  01112


Q ss_pred             ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +...+.++.+++.+||..||++||++.++++.
T Consensus       238 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  269 (292)
T cd06644         238 PSKWSMEFRDFLKTALDKHPETRPSAAQLLEH  269 (292)
T ss_pred             CcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            34556789999999999999999999999864

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=2.1e-42  Score=314.11  Aligned_cols=254  Identities=19%  Similarity=0.298  Sum_probs=205.6

Q ss_pred             CcccccccCCCCCCcEEEEEEe--------CCCcEEEEEEeCCCC-CchHHHHHHHHHHHhcC-CCcccccccceeeeCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL--------ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGD  126 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~  126 (359)
                      .+|.+.+.||+|+||.||+|..        .++..||+|.+.... ......+.+|+.+++.+ +||||+++++++....
T Consensus        15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~   94 (304)
T cd05101          15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   94 (304)
T ss_pred             HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC
Confidence            3566778889999999999973        124579999987543 23356788999999999 7999999999999999


Q ss_pred             cceEEEecCCCCCHhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC
Q 018244          127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD  192 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~  192 (359)
                      ..++||||+++|+|.+++....              ...+++..+..++.||+.||.|||++ |++|+||||+||+++++
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-givH~dlkp~Nili~~~  173 (304)
T cd05101          95 PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ-KCIHRDLAARNVLVTEN  173 (304)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC-CeeecccccceEEEcCC
Confidence            9999999999999999987532              23578889999999999999999999 99999999999999999


Q ss_pred             CCeEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhh
Q 018244          193 VNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI  265 (359)
Q Consensus       193 ~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~  265 (359)
                      +.+||+|||+++......      ...++..|+|||++.+..++.++||||||+++|+|++ |..|+.............
T Consensus       174 ~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~  253 (304)
T cd05101         174 NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK  253 (304)
T ss_pred             CcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH
Confidence            999999999988654322      2234567999999998889999999999999999998 666665544333322211


Q ss_pred             hhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      .     ......+...+..+.+++.+||+.+|++|||+.++++.|+++...
T Consensus       254 ~-----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~  299 (304)
T cd05101         254 E-----GHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL  299 (304)
T ss_pred             c-----CCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence            1     111122345677899999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=2.4e-42  Score=306.25  Aligned_cols=242  Identities=20%  Similarity=0.284  Sum_probs=196.6

Q ss_pred             cCCCCCCcEEEEEEeC---CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCC
Q 018244           64 EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs  139 (359)
                      .||+|+||.||+|.+.   .+..||+|.+...... ..+.+.+|+.+++.++|+||+++++++. ....++||||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            3799999999999753   3557999999765432 2456889999999999999999999885 457899999999999


Q ss_pred             HhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCC-------c
Q 018244          140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-------Y  212 (359)
Q Consensus       140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~-------~  212 (359)
                      |.+++.. ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++........       .
T Consensus        81 L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  158 (257)
T cd05115          81 LNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGK-NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG  158 (257)
T ss_pred             HHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhc-CeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence            9999864 345789999999999999999999999 999999999999999999999999999875443221       1


Q ss_pred             CCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       213 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      .++..|+|||.+.+..++.++||||||+++|++++ |..||..........     ..........+...+.++.+++.+
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~  233 (257)
T cd05115         159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMS-----FIEQGKRLDCPAECPPEMYALMKD  233 (257)
T ss_pred             CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHH-----HHHCCCCCCCCCCCCHHHHHHHHH
Confidence            22467999999988889999999999999999996 887776543222211     111112223345567889999999


Q ss_pred             hcccCCCCCCCHHHHHHHHHHh
Q 018244          292 CLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      ||..||++||++.++.+.|+.+
T Consensus       234 c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         234 CWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HcCCChhhCcCHHHHHHHHhhh
Confidence            9999999999999999999875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=1.9e-42  Score=314.81  Aligned_cols=254  Identities=21%  Similarity=0.295  Sum_probs=206.2

Q ss_pred             CcccccccCCCCCCcEEEEEEeC--------CCcEEEEEEeCCCC-CchHHHHHHHHHHHhcC-CCcccccccceeeeCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGD  126 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~  126 (359)
                      ..|.+.+.||+|+||.||+|...        +...+|+|.+.... ......+.+|+.+++.+ +|+||+++++++...+
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   97 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            36788899999999999999742        23469999998643 23345688899999999 7999999999999999


Q ss_pred             cceEEEecCCCCCHhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC
Q 018244          127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD  192 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~  192 (359)
                      ..++||||+++|+|.+++....              ...+++..+..++.|++.||+|||++ +++|+||||+||+++.+
T Consensus        98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-gi~H~dlkp~Nill~~~  176 (307)
T cd05098          98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTED  176 (307)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC-CcccccccHHheEEcCC
Confidence            9999999999999999996532              13588999999999999999999999 99999999999999999


Q ss_pred             CCeEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhh
Q 018244          193 VNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI  265 (359)
Q Consensus       193 ~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~  265 (359)
                      +.++|+|||++.......      ...++..|+|||.+.+..++.++||||||+++|+|++ |..|+.............
T Consensus       177 ~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~  256 (307)
T cd05098         177 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK  256 (307)
T ss_pred             CcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH
Confidence            999999999987654321      1123467999999998889999999999999999998 777766544332222111


Q ss_pred             hhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                           .......+...+.++.+|+.+||+.+|++|||+.++++.|+.+...
T Consensus       257 -----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~  302 (307)
T cd05098         257 -----EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL  302 (307)
T ss_pred             -----cCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence                 1112223445677899999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=1.7e-42  Score=314.33  Aligned_cols=251  Identities=20%  Similarity=0.302  Sum_probs=203.6

Q ss_pred             cccccccCCCCCCcEEEEEEe------CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcC-CCcccccccceeeeCCcce
Q 018244           58 MENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  129 (359)
                      ++.+.+.||+|+||.||+|..      ..+..||+|.+..... ...+.+.+|+++++++ +|+||+++++++...+..+
T Consensus        36 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~  115 (302)
T cd05055          36 NLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPIL  115 (302)
T ss_pred             HeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceE
Confidence            466778889999999999973      1345799999876432 2345688999999999 7999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      ++|||+++|+|.+++.......+++.++..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++......
T Consensus       116 lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~  194 (302)
T cd05055         116 VITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNVLLTHGKIVKICDFGLARDIMND  194 (302)
T ss_pred             EEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeehhhhccceEEEcCCCeEEECCCcccccccCC
Confidence            999999999999999754444589999999999999999999999 9999999999999999999999999998765432


Q ss_pred             C------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHH
Q 018244          210 R------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       210 ~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                      .      ...++..|+|||.+.+..++.++||||||+++|+|++ |..|+............    .........+...+
T Consensus       195 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~  270 (302)
T cd05055         195 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKL----IKEGYRMAQPEHAP  270 (302)
T ss_pred             CceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHH----HHcCCcCCCCCCCC
Confidence            2      1234578999999998889999999999999999998 88877654332211111    11111112223456


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      .++.+++.+||+.+|++|||+.++++.|+++
T Consensus       271 ~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         271 AEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            7899999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2.1e-42  Score=311.02  Aligned_cols=253  Identities=18%  Similarity=0.309  Sum_probs=200.0

Q ss_pred             ccccccCCCCCCcEEEEEEe-----CCCcEEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeeeC--CcceE
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL  130 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l  130 (359)
                      |.+++.||+|+||.||.|..     .++..||+|.+.... ......+.+|+++++.++||||+++.+++...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (284)
T cd05079           6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL   85 (284)
T ss_pred             hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence            57788899999999999973     357789999987553 22345789999999999999999999998775  56899


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      ||||+++++|.+++.. ....+++..+..++.|++.||+|||++ +++|+||||+||++++++.++|+|||++.......
T Consensus        86 v~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~~i~~aL~~lH~~-gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~  163 (284)
T cd05079          86 IMEFLPSGSLKEYLPR-NKNKINLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK  163 (284)
T ss_pred             EEEccCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccchheEEEcCCCCEEECCCccccccccCc
Confidence            9999999999999864 334689999999999999999999999 99999999999999999999999999988654322


Q ss_pred             -------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHh----------hhhhhhhccccc
Q 018244          211 -------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR----------DRNIQTLTDSCL  273 (359)
Q Consensus       211 -------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~----------~~~~~~~~~~~~  273 (359)
                             ...++..|+|||.+.+..++.++||||||+++|+|+++..|..........          ............
T Consensus       164 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (284)
T cd05079         164 EYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGK  243 (284)
T ss_pred             cceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCc
Confidence                   234556799999998888999999999999999999987553221110000          000000011111


Q ss_pred             cCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      ....+...+..+.+|+.+||+.||++|||+.++++.|+.+
T Consensus       244 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         244 RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            1122344678899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=4.1e-43  Score=321.18  Aligned_cols=232  Identities=19%  Similarity=0.234  Sum_probs=190.2

Q ss_pred             cCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHH-HHhcCCCcccccccceeeeCCcceEEEecCCCC
Q 018244           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      .||+|+||.||+|+. .++..||+|++.....   .....+.+|.. +++.++||||+++++++.+.+..++||||+++|
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   81 (321)
T cd05603           2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG   81 (321)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence            579999999999995 4688999999875321   12334555554 678899999999999999999999999999999


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----CCCcCC
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----~~~~~~  214 (359)
                      +|...+.  ....+++..+..++.||+.||.|||+. +++||||||+||+++.++.+||+|||+++....    .....|
T Consensus        82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (321)
T cd05603          82 ELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCG  158 (321)
T ss_pred             CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccC
Confidence            9998886  445688999999999999999999999 999999999999999999999999999875322    123457


Q ss_pred             CccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcc
Q 018244          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ  294 (359)
Q Consensus       215 t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  294 (359)
                      |+.|+|||.+.+..++.++|||||||++|+|++|..||...............      ....+...+.++.+++.+||+
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~  232 (321)
T cd05603         159 TPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK------PLQLPGGKTVAACDLLVGLLH  232 (321)
T ss_pred             CcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHcc
Confidence            89999999999888999999999999999999999998766443333222211      112344566789999999999


Q ss_pred             cCCCCCCCHH
Q 018244          295 YEPRERPNPR  304 (359)
Q Consensus       295 ~dp~~Rps~~  304 (359)
                      .||.+||++.
T Consensus       233 ~~p~~R~~~~  242 (321)
T cd05603         233 KDQRRRLGAK  242 (321)
T ss_pred             CCHhhcCCCC
Confidence            9999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=5.8e-43  Score=325.95  Aligned_cols=256  Identities=17%  Similarity=0.139  Sum_probs=203.0

Q ss_pred             HHHHhcCCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeee
Q 018244           49 LRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCE  124 (359)
Q Consensus        49 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~  124 (359)
                      +....-....|.+++.||+|+||.||+|.. .++..+|+|++....   ......+.+|+.+++.++||||+++++.+..
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~  114 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  114 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            333444557888999999999999999995 468899999986422   1223457789999999999999999999999


Q ss_pred             CCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                      +...++||||+++|+|.+++.   ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NIll~~~~~ikL~DfG~a~  190 (371)
T cd05622         115 DRYLYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCM  190 (371)
T ss_pred             CCEEEEEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence            999999999999999999984   34588999999999999999999999 99999999999999999999999999987


Q ss_pred             cCCCC-----CCcCCCccccCcccccCC----CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccC
Q 018244          205 NSRDG-----RSYSTNLAFTPPEYLRTG----RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG  275 (359)
Q Consensus       205 ~~~~~-----~~~~~t~~y~aPE~~~~~----~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  275 (359)
                      .....     ....||+.|+|||++.+.    .++.++|||||||++|+|++|..||.................  ....
T Consensus       191 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~--~~~~  268 (371)
T cd05622         191 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN--SLTF  268 (371)
T ss_pred             EcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--cccC
Confidence            65432     244689999999998753    278899999999999999999999876543322222111100  0111


Q ss_pred             CCChHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHH
Q 018244          276 QFSSDEGTELVRLASRCLQYEPRE--RPNPRSLVTAL  310 (359)
Q Consensus       276 ~~~~~~~~~l~~li~~cl~~dp~~--Rps~~~il~~L  310 (359)
                      ......+..+.+++.+||..++.+  |+++.+++++.
T Consensus       269 ~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~  305 (371)
T cd05622         269 PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL  305 (371)
T ss_pred             CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence            112356788999999999844433  67999988763

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=4.1e-42  Score=303.20  Aligned_cols=241  Identities=25%  Similarity=0.399  Sum_probs=199.6

Q ss_pred             cCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCch-HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCHhh
Q 018244           64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK  142 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~  142 (359)
                      .||+|+||.||+|...++..+|+|.+....... ...+.+|+++++.++||||+++++++......++||||+++++|.+
T Consensus         2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   81 (250)
T cd05085           2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS   81 (250)
T ss_pred             ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence            469999999999998788899999987654332 3468899999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----CcCCCcc
Q 018244          143 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----SYSTNLA  217 (359)
Q Consensus       143 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----~~~~t~~  217 (359)
                      ++.. ....+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||++.......     ...++..
T Consensus        82 ~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~  159 (250)
T cd05085          82 FLRK-KKDELKTKQLVKFALDAAAGMAYLESK-NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIK  159 (250)
T ss_pred             HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCccc
Confidence            8864 345689999999999999999999999 99999999999999999999999999987543321     1233567


Q ss_pred             ccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccC
Q 018244          218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE  296 (359)
Q Consensus       218 y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  296 (359)
                      |+|||++.+..++.++||||||+++|++++ |..||..............     ......+...+.++.+++.+||+.+
T Consensus       160 y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~  234 (250)
T cd05085         160 WTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEK-----GYRMSCPQKCPDDVYKVMQRCWDYK  234 (250)
T ss_pred             ccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHHHHcccC
Confidence            999999998889999999999999999998 8878765433322221111     1122234456788999999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 018244          297 PRERPNPRSLVTALV  311 (359)
Q Consensus       297 p~~Rps~~~il~~L~  311 (359)
                      |++|||+.++++.|.
T Consensus       235 p~~Rp~~~~l~~~l~  249 (250)
T cd05085         235 PENRPKFSELQKELA  249 (250)
T ss_pred             cccCCCHHHHHHHhc
Confidence            999999999998764

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.8e-42  Score=307.20  Aligned_cols=249  Identities=22%  Similarity=0.330  Sum_probs=200.2

Q ss_pred             ccccccCCCCCCcEEEEEEeC-C---CcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCc-----
Q 018244           59 ENIVSEHGEKAPNVVYKGKLE-N---QFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE-----  127 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-----  127 (359)
                      |.+.+.||+|+||.||+|... +   +..||+|.+.....  .....+.+|+..++.++|+||+++++++.....     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            356677899999999999853 2   36799999986432  234578999999999999999999998866544     


Q ss_pred             -ceEEEecCCCCCHhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCC
Q 018244          128 -RLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (359)
Q Consensus       128 -~~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~  202 (359)
                       .++++||+++|+|..++...    ....+++..+..++.|++.||.|||++ +++|+||||+||++++++.+||+|||+
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~  159 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR-NFIHRDLAARNCMLREDMTVCVADFGL  159 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CeeccccchheEEECCCCeEEECCccc
Confidence             79999999999999988532    234689999999999999999999999 999999999999999999999999999


Q ss_pred             cccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccC
Q 018244          203 MKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEG  275 (359)
Q Consensus       203 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  275 (359)
                      ++......      ....+..|+|||.+.+..++.++||||||+++|||++ |..|+..............     ....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~  234 (273)
T cd05035         160 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRH-----GNRL  234 (273)
T ss_pred             eeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCC
Confidence            88654332      1223568999999988889999999999999999999 7777655433222211111     1112


Q ss_pred             CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      ..+...+.++.+++.+||+.||++|||+.++++.|+.+
T Consensus       235 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         235 KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            23455677899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=9.2e-43  Score=315.42  Aligned_cols=253  Identities=17%  Similarity=0.232  Sum_probs=209.3

Q ss_pred             HHHhcCCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcc
Q 018244           50 RTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (359)
Q Consensus        50 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  128 (359)
                      ....+....|.+++.||.|+||.||+|.. .++..||+|.+........+.+.+|+.+++.++|+||+++++++......
T Consensus        12 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~   91 (297)
T cd06656          12 VSVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL   91 (297)
T ss_pred             cccCChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEE
Confidence            33445557889999999999999999994 57889999999876655567788999999999999999999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      ++||||+++++|.+++.   ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus        92 ~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~-~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~  167 (297)
T cd06656          92 WVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALDFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  167 (297)
T ss_pred             EEeecccCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence            99999999999999984   35689999999999999999999999 999999999999999999999999999876543


Q ss_pred             CC----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHH
Q 018244          209 GR----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE  284 (359)
Q Consensus       209 ~~----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (359)
                      ..    ...+++.|+|||.+.+..++.++|+||||+++|+|++|..||.........   .............+...+..
T Consensus       168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  244 (297)
T cd06656         168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL---YLIATNGTPELQNPERLSAV  244 (297)
T ss_pred             CccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe---eeeccCCCCCCCCccccCHH
Confidence            32    345678999999999888999999999999999999999888653221110   00000111111123445677


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          285 LVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       285 l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+++.+||+.||++|||+.+++++
T Consensus       245 ~~~li~~~l~~~p~~Rps~~~il~~  269 (297)
T cd06656         245 FRDFLNRCLEMDVDRRGSAKELLQH  269 (297)
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcC
Confidence            9999999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=2.5e-42  Score=312.42  Aligned_cols=254  Identities=17%  Similarity=0.246  Sum_probs=209.0

Q ss_pred             HHHHhcCCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCc
Q 018244           49 LRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE  127 (359)
Q Consensus        49 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  127 (359)
                      +......-..|.+++.||.|++|.||+|. ..++..||+|.+........+.+.+|+.+++.++|+||+++++++...+.
T Consensus        11 ~~~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   90 (296)
T cd06655          11 IVSIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDE   90 (296)
T ss_pred             HHhcCCCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCce
Confidence            33344444668899999999999999998 45788999999987665556778999999999999999999999999999


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      .++|+||+++++|..++.   ...+++.++..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++....
T Consensus        91 ~~lv~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~-~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~  166 (296)
T cd06655          91 LFVVMEYLAGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHAN-QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQIT  166 (296)
T ss_pred             EEEEEEecCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEccCccchhcc
Confidence            999999999999999884   34689999999999999999999999 99999999999999999999999999987654


Q ss_pred             CCC----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          208 DGR----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       208 ~~~----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                      ...    ...++..|+|||.+.+..++.++||||||+++|+|++|..||.............   .........+...+.
T Consensus       167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  243 (296)
T cd06655         167 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA---TNGTPELQNPEKLSP  243 (296)
T ss_pred             cccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hcCCcccCCcccCCH
Confidence            332    3357789999999998889999999999999999999998886543211111100   000011112344667


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+.+++.+||..||++|||+.+++.+
T Consensus       244 ~~~~li~~~l~~dp~~Rpt~~~il~~  269 (296)
T cd06655         244 IFRDFLNRCLEMDVEKRGSAKELLQH  269 (296)
T ss_pred             HHHHHHHHHhhcChhhCCCHHHHhhC
Confidence            89999999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=1.1e-42  Score=313.27  Aligned_cols=250  Identities=15%  Similarity=0.164  Sum_probs=193.8

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcC---CCcccccccceeee-----CC
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQL---RNRRLANLLGCCCE-----GD  126 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l---~h~niv~~~~~~~~-----~~  126 (359)
                      .|++++.||+|+||+||+|.. .+++.||+|.+......  ....+.+|+++++.+   +||||+++++++..     ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            367888899999999999985 46889999998754322  123456677777665   69999999998864     24


Q ss_pred             cceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      ..+++|||+.+ +|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++...
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili~~~~~~kl~dfg~~~~~  158 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTSGGQVKLADFGLARIY  158 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEECccCccccc
Confidence            57999999975 898888654455689999999999999999999999 9999999999999999999999999998865


Q ss_pred             CCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhc--------------
Q 018244          207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT--------------  269 (359)
Q Consensus       207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~--------------  269 (359)
                      ...   ....+|..|+|||++.+..++.++|||||||++|+|++|.+||.................              
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T cd07863         159 SCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLP  238 (288)
T ss_pred             cCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccc
Confidence            433   234578899999999988899999999999999999999988755422211111100000              


Q ss_pred             ccccc-------CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          270 DSCLE-------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       270 ~~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .....       .......+.++.+++.+||+.||++|||+.+++.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h  285 (288)
T cd07863         239 RGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH  285 (288)
T ss_pred             ccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            00000       00112356778999999999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=3.8e-42  Score=304.64  Aligned_cols=242  Identities=22%  Similarity=0.297  Sum_probs=198.6

Q ss_pred             cCCCCCCcEEEEEEeCC--C--cEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCC
Q 018244           64 EHGEKAPNVVYKGKLEN--Q--FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      .||+|++|.||+|.+.+  +  ..||+|.+..... ...+.+.+|++++++++|+||+++++++.. ...++||||++++
T Consensus         2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~   80 (257)
T cd05040           2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLG   80 (257)
T ss_pred             cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCC
Confidence            56999999999998533  3  3699999987765 456678999999999999999999999988 8899999999999


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-------C
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-------S  211 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-------~  211 (359)
                      +|.+++.......+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++.......       .
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  159 (257)
T cd05040          81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEH  159 (257)
T ss_pred             cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC-CccccccCcccEEEecCCEEEeccccccccccccccceecccC
Confidence            999999754335789999999999999999999999 99999999999999999999999999988654321       2


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ..++..|+|||.+.+..++.++||||||+++|+|++ |..|+..............    .......+...+..+.+++.
T Consensus       160 ~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~  235 (257)
T cd05040         160 LKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDK----EGERLERPEACPQDIYNVML  235 (257)
T ss_pred             CCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh----cCCcCCCCccCCHHHHHHHH
Confidence            345678999999998889999999999999999998 8888754322222111111    11111123345678999999


Q ss_pred             HhcccCCCCCCCHHHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~L~  311 (359)
                      +||+.+|++|||+.++++.|.
T Consensus       236 ~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         236 QCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHCCCCcccCCCHHHHHHHhc
Confidence            999999999999999998875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=1.2e-42  Score=316.35  Aligned_cols=251  Identities=18%  Similarity=0.267  Sum_probs=199.0

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ...|.+++.||+|+||+||+|.. .++..||+|.+...... ....+.+|+++++.++||||+++++++..++..++|||
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   84 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE   84 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence            45688999999999999999985 46788999998754322 23457789999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |+++ +|.+++.. ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++......    
T Consensus        85 ~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~  161 (309)
T cd07872          85 YLDK-DLKQYMDD-CGNIMSMHNVKIFLYQILRGLAYCHRR-KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTY  161 (309)
T ss_pred             CCCC-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEECccccceecCCCcccc
Confidence            9976 78888754 345689999999999999999999999 9999999999999999999999999998764332    


Q ss_pred             CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhh-----------------ccc
Q 018244          210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL-----------------TDS  271 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~-----------------~~~  271 (359)
                      ....++..|+|||.+.+ ..++.++||||||+++|+|+||+.||................                 ...
T Consensus       162 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (309)
T cd07872         162 SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNY  241 (309)
T ss_pred             ccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhh
Confidence            23456889999998875 458899999999999999999999887543321111110000                 000


Q ss_pred             cccC-------CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          272 CLEG-------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       272 ~~~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ....       ......+.++.+|+.+||+.||.+|||+.+++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  286 (309)
T cd07872         242 NFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH  286 (309)
T ss_pred             hcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence            0000       0012346789999999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=2.4e-42  Score=310.36  Aligned_cols=246  Identities=16%  Similarity=0.202  Sum_probs=200.7

Q ss_pred             ccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCC
Q 018244           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  137 (359)
                      |++++.||.|+||.||+|... ++..+|+|.+........+.+.+|+++++.++|+|++++++++...+..++|+||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            577888999999999999954 5778999999766555567788999999999999999999999999999999999999


Q ss_pred             CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CCcC
Q 018244          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYS  213 (359)
Q Consensus       138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~~~  213 (359)
                      ++|..++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......    ....
T Consensus        87 ~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~-~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  164 (282)
T cd06643          87 GAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHEN-KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI  164 (282)
T ss_pred             CcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEEccCCCEEEcccccccccccccccccccc
Confidence            999888754 345789999999999999999999999 9999999999999999999999999998654322    2345


Q ss_pred             CCccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          214 TNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       214 ~t~~y~aPE~~~-----~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                      ++..|+|||++.     +..++.++|||||||++|+|++|+.||............... ..  .....+...+.++.++
T Consensus       165 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~l  241 (282)
T cd06643         165 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-EP--PTLAQPSRWSSEFKDF  241 (282)
T ss_pred             ccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhc-CC--CCCCCccccCHHHHHH
Confidence            788999999984     344778999999999999999999887654322111111110 00  0111233456789999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+||+.||++|||+.+++++
T Consensus       242 i~~~l~~~p~~Rp~~~~il~~  262 (282)
T cd06643         242 LKKCLEKNVDARWTTTQLLQH  262 (282)
T ss_pred             HHHHccCChhhCcCHHHHhcC
Confidence            999999999999999998764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=2.4e-42  Score=308.11  Aligned_cols=250  Identities=22%  Similarity=0.296  Sum_probs=203.0

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CC---cEEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQ---FRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      .+|++.+.||+|+||.||+|... ++   ..||+|.+.... ......+..|+.+++.++||||+++++++......++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            46778888999999999999854 33   369999987643 22356789999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCC
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS  211 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~  211 (359)
                      |||+++++|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++........
T Consensus        84 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~l~~al~~lH~~-g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~  161 (269)
T cd05065          84 TEFMENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEM-NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS  161 (269)
T ss_pred             EecCCCCcHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence            999999999999864 345689999999999999999999999 999999999999999999999999999876433211


Q ss_pred             -------cC--CCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHH
Q 018244          212 -------YS--TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE  281 (359)
Q Consensus       212 -------~~--~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (359)
                             ..  .+..|+|||.+.+..++.++||||||+++||+++ |..||..............     ......+...
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~-----~~~~~~~~~~  236 (269)
T cd05065         162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQ-----DYRLPPPMDC  236 (269)
T ss_pred             ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHc-----CCcCCCcccC
Confidence                   11  1347999999998889999999999999999886 8887765433222221111     1111223455


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          282 GTELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       282 ~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      +..+.+++.+||..+|++||++.+++..|+.+
T Consensus       237 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         237 PTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            67899999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.8e-42  Score=311.08  Aligned_cols=255  Identities=22%  Similarity=0.329  Sum_probs=205.5

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-----CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeee--CCcc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCE--GDER  128 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~  128 (359)
                      ..+++++.||+|+||.||+|...     ++..+|+|.+...... ..+.+.+|+++++.++|+||+++++++..  ....
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            45778888999999999999853     3678999999866543 45678999999999999999999999877  5578


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      +++|||+++++|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||.+.....
T Consensus        84 ~lv~e~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  161 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQR-HRDQINLKRLLLFSSQICKGMDYLGSQ-RYIHRDLAARNILVESEDLVKISDFGLAKVLPE  161 (284)
T ss_pred             EEEEecCCCCCHHHHHHh-CccccCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence            999999999999999964 233589999999999999999999999 999999999999999999999999999987653


Q ss_pred             CC-------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHh----------hhhhhhhccc
Q 018244          209 GR-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR----------DRNIQTLTDS  271 (359)
Q Consensus       209 ~~-------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~----------~~~~~~~~~~  271 (359)
                      ..       ...++..|+|||.+.+..++.++||||||+++|+|++|..|+.........          ..........
T Consensus       162 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd05038         162 DKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKE  241 (284)
T ss_pred             CCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHc
Confidence            22       123345699999998888999999999999999999999887543222111          0111111111


Q ss_pred             cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       272 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      ......+...+.++.+++.+||+.+|++|||+.++++.|+.+
T Consensus       242 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         242 GERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             CCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            111122334557899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.8e-42  Score=308.93  Aligned_cols=249  Identities=23%  Similarity=0.366  Sum_probs=202.9

Q ss_pred             CcccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      .+|.+.+.||.|+||.||+|...      .+..||+|.+..... .....+.+|+.+++.++|+||+++++++......+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   85 (277)
T cd05032           6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL   85 (277)
T ss_pred             HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence            35678888999999999999853      246899999875532 33456889999999999999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccC
Q 018244          130 LVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG  201 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg  201 (359)
                      +||||+++|+|.+++....        ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||
T Consensus        86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~di~p~nill~~~~~~kl~dfg  164 (277)
T cd05032          86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK-KFVHRDLAARNCMVAEDLTVKIGDFG  164 (277)
T ss_pred             EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccChheEEEcCCCCEEECCcc
Confidence            9999999999999986422        23478899999999999999999999 99999999999999999999999999


Q ss_pred             CcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhcccccc
Q 018244          202 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE  274 (359)
Q Consensus       202 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~  274 (359)
                      +++.....      ....++..|+|||.+.+..++.++||||||+++|+++| |..|+.............     ....
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~-----~~~~  239 (277)
T cd05032         165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI-----DGGH  239 (277)
T ss_pred             cchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh-----cCCC
Confidence            98754332      22345678999999988889999999999999999998 887776543322222111     1111


Q ss_pred             CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 018244          275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~  311 (359)
                      ...+...+.++.+++.+||+.+|++|||+.++++.|+
T Consensus       240 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         240 LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            2234445788999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=3.9e-42  Score=310.26  Aligned_cols=251  Identities=20%  Similarity=0.283  Sum_probs=203.6

Q ss_pred             ccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           59 ENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      |++.+.||+|+||.||+|...      ....+|+|.+..... .....+.+|+++++.++||||+++++.+...+..+++
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI   81 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence            567788899999999999842      235699998875442 2345788999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee
Q 018244          132 AEYMPNDTLAKHLFHWE----------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF  189 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll  189 (359)
                      +||+.+++|.+++....                      ...+++..++.++.|++.||.|||+. +++|+||||+||++
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~ivH~dikp~nill  160 (290)
T cd05045          82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM-KLVHRDLAARNVLV  160 (290)
T ss_pred             EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC-CeehhhhhhheEEE
Confidence            99999999999875321                      23578999999999999999999999 99999999999999


Q ss_pred             CCCCCeEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhh
Q 018244          190 DDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRD  262 (359)
Q Consensus       190 ~~~~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~  262 (359)
                      ++++.++|+|||+++......      ...++..|+|||.+.+..++.++||||||+++|+|++ |..|+..........
T Consensus       161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~  240 (290)
T cd05045         161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFN  240 (290)
T ss_pred             cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            999999999999987643321      2234568999999988889999999999999999998 887776543332222


Q ss_pred             hhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          263 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      ..     ........+...+.++.+++.+||+.+|++||++.++++.|+++..
T Consensus       241 ~~-----~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         241 LL-----KTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV  288 (290)
T ss_pred             HH-----hCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence            11     1111222344566789999999999999999999999999998743

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=2.7e-42  Score=310.51  Aligned_cols=248  Identities=19%  Similarity=0.233  Sum_probs=200.0

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc---hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      |+..+.||.|+||+||+|.. .+++.+|+|.+......   ....+.+|+++|+.++|+||+.+.+.+..++..+++|||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            34556679999999999985 56889999998754322   234578899999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---CC
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RS  211 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---~~  211 (359)
                      +++++|.+++.......+++..+..++.|++.||.|||+. +|+|+||||+||++++++.++|+|||++......   ..
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~  160 (285)
T cd05632          82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE-NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRG  160 (285)
T ss_pred             ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccC
Confidence            9999999888654455799999999999999999999999 9999999999999999999999999998764332   23


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ..|+..|+|||.+.+..++.++|+||||+++|+|++|..||...................  ...++...+.++.+|+..
T Consensus       161 ~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~  238 (285)
T cd05632         161 RVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET--EEVYSAKFSEEAKSICKM  238 (285)
T ss_pred             CCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc--ccccCccCCHHHHHHHHH
Confidence            467899999999998889999999999999999999999887543222211111111111  112334566789999999


Q ss_pred             hcccCCCCCCC-----HHHHHHH
Q 018244          292 CLQYEPRERPN-----PRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rps-----~~~il~~  309 (359)
                      ||+.||++|||     +.+++.+
T Consensus       239 ~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         239 LLTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             HccCCHhHcCCCcccChHHHHcC
Confidence            99999999999     5566653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=1.7e-42  Score=308.69  Aligned_cols=248  Identities=15%  Similarity=0.156  Sum_probs=201.0

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      ..|.+.+.||+|+||.||+|.. .++..||+|.+..........+.+|+.+++.++||||+++++++...+..++||||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            4677888899999999999984 568899999998765555566888999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CC
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~  211 (359)
                      ++++|.+++.  ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......    ..
T Consensus        89 ~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~  165 (267)
T cd06645          89 GGGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSK-GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKS  165 (267)
T ss_pred             CCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEECcceeeeEccCccccccc
Confidence            9999999986  345789999999999999999999999 9999999999999999999999999998754322    33


Q ss_pred             cCCCccccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhh-hhhhccccccCCCChHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-IQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       212 ~~~t~~y~aPE~~~---~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                      ..++..|+|||.+.   ...++.++|+|||||++|+|++|..|+............ ......+...  .....+..+.+
T Consensus       166 ~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  243 (267)
T cd06645         166 FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLK--DKMKWSNSFHH  243 (267)
T ss_pred             ccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCccc--ccCCCCHHHHH
Confidence            46789999999874   445888999999999999999999887543211111000 0000111000  11134567999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ++.+||+.+|++|||+++++++
T Consensus       244 li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         244 FVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             HHHHHccCCchhCcCHHHHhcC
Confidence            9999999999999999998863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.2e-42  Score=311.61  Aligned_cols=254  Identities=20%  Similarity=0.275  Sum_probs=199.0

Q ss_pred             CcccccccCCCCCCcEEEEEEeCC---------------CcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLEN---------------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLG  120 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~  120 (359)
                      .+|++.+.||+|+||.||+|....               ...||+|.+...... ....+.+|+++++.++|+|++++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            368888999999999999987532               235899999765322 3456889999999999999999999


Q ss_pred             eeeeCCcceEEEecCCCCCHhhhhhcCC----------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC
Q 018244          121 CCCEGDERLLVAEYMPNDTLAKHLFHWE----------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD  190 (359)
Q Consensus       121 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~  190 (359)
                      ++...+..++||||+++++|.+++....          ...+++..++.++.|++.||.|||+. +++|+||||+||+++
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~Nill~  163 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL-NFVHRDLATRNCLVG  163 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc-CeeccccChhhEEEc
Confidence            9999999999999999999999985421          12468899999999999999999999 999999999999999


Q ss_pred             CCCCeEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhC--CCCCCcchhHHHhh
Q 018244          191 DDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG--KHIPPSHALDLIRD  262 (359)
Q Consensus       191 ~~~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg--~~p~~~~~~~~~~~  262 (359)
                      +++.+||+|||++.......      ...++..|+|||.+.++.++.++||||||+++|+|+++  ..||..........
T Consensus       164 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~  243 (295)
T cd05097         164 NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIE  243 (295)
T ss_pred             CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHH
Confidence            99999999999987643322      12335689999999988899999999999999999984  44554332222211


Q ss_pred             hhhhhhc--cccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 018244          263 RNIQTLT--DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       263 ~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~  311 (359)
                      .......  ........+...+..+.+|+.+||+.||++|||+.+|++.|+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         244 NTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            1111000  000111123345678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=3.4e-42  Score=313.32  Aligned_cols=250  Identities=17%  Similarity=0.238  Sum_probs=200.6

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      +|++++.||+|+||.||++.. .++..+|+|.+...... ...++.+|++++..++||||+++++++..++..++||||+
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~   81 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM   81 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence            577888899999999999984 46888999998765332 2456889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC--CCCcC
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSYS  213 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~--~~~~~  213 (359)
                      ++++|.+++..  ...+++..+..++.|++.||.|||+..+++|+||||+||++++++.++|+|||++.....  .....
T Consensus        82 ~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  159 (308)
T cd06615          82 DGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV  159 (308)
T ss_pred             CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCC
Confidence            99999999963  466899999999999999999999743899999999999999999999999999876433  23456


Q ss_pred             CCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhh---hhhhcc--------------------
Q 018244          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN---IQTLTD--------------------  270 (359)
Q Consensus       214 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~---~~~~~~--------------------  270 (359)
                      ++..|+|||.+.+..++.++|+||||+++|+|++|..|+............   ......                    
T Consensus       160 ~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (308)
T cd06615         160 GTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAI  239 (308)
T ss_pred             CCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhH
Confidence            788999999998888999999999999999999999887643221111000   000000                    


Q ss_pred             --------ccccCCCC-hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          271 --------SCLEGQFS-SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       271 --------~~~~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                              .......+ ...+.++.+++.+||..||++|||+.+++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         240 FELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             HHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                    00000011 1246679999999999999999999999876

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=2.5e-42  Score=320.79  Aligned_cols=248  Identities=15%  Similarity=0.189  Sum_probs=195.0

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeCC------
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD------  126 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------  126 (359)
                      ...|.+++.||+|+||.||+|.. .++..||+|.+....  ......+.+|+.+++.++||||+++++++....      
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   99 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ   99 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence            35788899999999999999985 468899999997542  233556889999999999999999999886543      


Q ss_pred             cceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      ..++||||+++ +|.+.+.    ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus       100 ~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~-~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~  173 (359)
T cd07876         100 DVYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTA  173 (359)
T ss_pred             eeEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence            47999999976 5766663    2478899999999999999999999 9999999999999999999999999998764


Q ss_pred             CCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhh------------------h
Q 018244          207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN------------------I  265 (359)
Q Consensus       207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~------------------~  265 (359)
                      ...   ....+|..|+|||++.+..++.++||||||+++|+|++|+.||............                  .
T Consensus       174 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (359)
T cd07876         174 CTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTV  253 (359)
T ss_pred             ccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence            332   2346788999999999889999999999999999999999988654211100000                  0


Q ss_pred             hhhccc--ccc----------------CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          266 QTLTDS--CLE----------------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       266 ~~~~~~--~~~----------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ......  ...                .......+.++.+|+.+||+.||++|||+.+++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  315 (359)
T cd07876         254 RNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH  315 (359)
T ss_pred             HHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence            000000  000                00011234678999999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-42  Score=319.11  Aligned_cols=249  Identities=18%  Similarity=0.145  Sum_probs=197.5

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      +|++++.||+|+||+||++.. .+++.||+|++....   ....+.+.+|+.++..++|+||+++++++...+..++|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (331)
T cd05597           2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD   81 (331)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence            578889999999999999994 468899999997421   1224457889999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC---
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~---  210 (359)
                      |+++|+|.+++.. ....+++..+..++.||+.||+|||++ +++||||||+|||++.++.+||+|||++.......   
T Consensus        82 ~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~  159 (331)
T cd05597          82 YYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQL-GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ  159 (331)
T ss_pred             cCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence            9999999999864 345689999999999999999999999 99999999999999999999999999987654322   


Q ss_pred             --CcCCCccccCcccccC-----CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          211 --SYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       211 --~~~~t~~y~aPE~~~~-----~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                        ...||+.|+|||++..     ..++.++|||||||++|+|++|+.||..................... .......+.
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~  238 (331)
T cd05597         160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQF-PPDVTDVSE  238 (331)
T ss_pred             ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccC-CCccCCCCH
Confidence              2358999999999873     35788999999999999999999998765432222111111000000 111123577


Q ss_pred             HHHHHHHHhcccCCCC--CCCHHHHHHH
Q 018244          284 ELVRLASRCLQYEPRE--RPNPRSLVTA  309 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~--Rps~~~il~~  309 (359)
                      ++.+++.+|+..++++  |+++.+++++
T Consensus       239 ~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         239 EAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             HHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            8999999988654443  7899999876

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.5e-42  Score=305.84  Aligned_cols=245  Identities=18%  Similarity=0.211  Sum_probs=200.8

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc-----hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-----DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      .|.+.+.||.|++|.||+|.. .++..+|+|.+......     ....+.+|+++++.++||||+++++++...+..++|
T Consensus         3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v   82 (263)
T cd06625           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIF   82 (263)
T ss_pred             cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEE
Confidence            355666779999999999984 56889999998754221     234678899999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--  209 (359)
                      +||+++++|.+++.  ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++......  
T Consensus        83 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~  159 (263)
T cd06625          83 MEYMPGGSVKDQLK--AYGALTETVTRKYTRQILEGVEYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS  159 (263)
T ss_pred             EEECCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence            99999999999986  345689999999999999999999999 9999999999999999999999999998754332  


Q ss_pred             -----CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHH
Q 018244          210 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE  284 (359)
Q Consensus       210 -----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (359)
                           ....++..|+|||.+.+..++.++||||||+++|+|++|+.||...........    ..........+...+..
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  235 (263)
T cd06625         160 SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFK----IATQPTNPQLPSHVSPD  235 (263)
T ss_pred             ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHH----HhccCCCCCCCccCCHH
Confidence                 223467889999999988899999999999999999999988755322111111    11111122344556778


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          285 LVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       285 l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+++.+||..+|++|||+.+++++
T Consensus       236 ~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         236 ARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             HHHHHHHHhhcCcccCCCHHHHhhC
Confidence            9999999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=5.1e-42  Score=306.39  Aligned_cols=247  Identities=23%  Similarity=0.316  Sum_probs=195.8

Q ss_pred             ccccCCCCCCcEEEEEEeCC-Cc--EEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeC------Ccce
Q 018244           61 IVSEHGEKAPNVVYKGKLEN-QF--RIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DERL  129 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~  129 (359)
                      +.+.||+|+||.||+|...+ +.  .+|+|.+....  ....+.+.+|+++++.++|+||+++++++...      ...+
T Consensus         3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   82 (272)
T cd05075           3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV   82 (272)
T ss_pred             cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence            45678999999999998644 32  69999987643  23356788999999999999999999987432      2468


Q ss_pred             EEEecCCCCCHhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCccc
Q 018244          130 LVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~  205 (359)
                      ++|||+.+|+|.+++...    ....+++..+..++.|++.||.|||++ +++|+||||+|||+++++.++|+|||+++.
T Consensus        83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  161 (272)
T cd05075          83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKK  161 (272)
T ss_pred             EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhheEEcCCCCEEECCCCcccc
Confidence            999999999999887421    234589999999999999999999999 999999999999999999999999999887


Q ss_pred             CCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCC
Q 018244          206 SRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFS  278 (359)
Q Consensus       206 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (359)
                      .....      ...++..|+|||.+.+..++.++||||||+++|+|++ |..||.............     .......+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~  236 (272)
T cd05075         162 IYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLR-----QGNRLKQP  236 (272)
T ss_pred             cCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-----cCCCCCCC
Confidence            54322      2234568999999998889999999999999999999 677776533222211111     11111223


Q ss_pred             hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          279 SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      ...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus       237 ~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         237 PDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            45667899999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=2.8e-42  Score=323.17  Aligned_cols=251  Identities=20%  Similarity=0.292  Sum_probs=202.3

Q ss_pred             cccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCCch-HHHHHHHHHHHhcCC-CcccccccceeeeCCcce
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLR-NRRLANLLGCCCEGDERL  129 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~  129 (359)
                      .+.+.+.||+|+||.||+|++.      .+..||+|++....... .+.+.+|+++|..+. ||||+++++++......+
T Consensus        38 ~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~  117 (401)
T cd05107          38 NLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIY  117 (401)
T ss_pred             HeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcE
Confidence            4567788899999999999853      24679999998653332 446889999999997 999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCC------------------------------------------------------------
Q 018244          130 LVAEYMPNDTLAKHLFHWET------------------------------------------------------------  149 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~------------------------------------------------------------  149 (359)
                      +||||+++|+|.+++.....                                                            
T Consensus       118 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (401)
T cd05107         118 IITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKG  197 (401)
T ss_pred             EEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchh
Confidence            99999999999999864211                                                            


Q ss_pred             ------------------------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC
Q 018244          150 ------------------------------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV  193 (359)
Q Consensus       150 ------------------------------------~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~  193 (359)
                                                          ..+++..+..++.|++.||.|||+. +++||||||+|||+++++
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrdlkp~NiLl~~~~  276 (401)
T cd05107         198 TVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK-NCVHRDLAARNVLICEGK  276 (401)
T ss_pred             hhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CcCcccCCcceEEEeCCC
Confidence                                                2467788899999999999999999 999999999999999999


Q ss_pred             CeEEeccCCcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhh
Q 018244          194 NPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQ  266 (359)
Q Consensus       194 ~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~  266 (359)
                      .+||+|||+++.....      ....++..|+|||.+.+..++.++||||||+++|||++ |..|+..........    
T Consensus       277 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~----  352 (401)
T cd05107         277 LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFY----  352 (401)
T ss_pred             EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHH----
Confidence            9999999998764321      12345678999999998889999999999999999998 777765432221111    


Q ss_pred             hhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      .......+...+...+.++.+|+.+||..+|++||++.++++.|+.+
T Consensus       353 ~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~  399 (401)
T cd05107         353 NAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL  399 (401)
T ss_pred             HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            11111122223445678899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-43  Score=326.71  Aligned_cols=249  Identities=17%  Similarity=0.214  Sum_probs=207.3

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCC-CcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      -+.+++++.||.|+||.||+|..++ +...|.|++.-......+.|+-||++|..++||+||++++.|...+.++|+.||
T Consensus        31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF  110 (1187)
T KOG0579|consen   31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF  110 (1187)
T ss_pred             HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence            3457899999999999999999554 555678888877777788999999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC----CCCC
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS----RDGR  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~----~~~~  210 (359)
                      |.||-+...+.. -++.+++.++..+++|++.||.|||++ +|||||||+.|||++-+|.++|+|||.+-..    ....
T Consensus       111 C~GGAVDaimlE-L~r~LtE~QIqvvc~q~ldALn~LHs~-~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRD  188 (1187)
T KOG0579|consen  111 CGGGAVDAIMLE-LGRVLTEDQIQVVCYQVLDALNWLHSQ-NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRD  188 (1187)
T ss_pred             cCCchHhHHHHH-hccccchHHHHHHHHHHHHHHHHHhhc-chhhhhccccceEEEecCcEeeecccccccchhHHhhhc
Confidence            999988887765 567899999999999999999999999 9999999999999999999999999987543    2345


Q ss_pred             CcCCCccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          211 SYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~-----~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                      .+.||+.|||||++.     ..+|+.++||||||++|.||..+.+|...-.  .++.-.......+ .....|..++..+
T Consensus       189 sFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln--pMRVllKiaKSeP-PTLlqPS~Ws~~F  265 (1187)
T KOG0579|consen  189 SFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN--PMRVLLKIAKSEP-PTLLQPSHWSRSF  265 (1187)
T ss_pred             cccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc--hHHHHHHHhhcCC-CcccCcchhhhHH
Confidence            789999999999876     3569999999999999999999996543322  1211111111111 1122467889999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHH
Q 018244          286 VRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+++..||.+||..||++.+++++
T Consensus       266 ~DfLk~cL~Knp~~Rp~aaqll~H  289 (1187)
T KOG0579|consen  266 SDFLKRCLVKNPRNRPPAAQLLKH  289 (1187)
T ss_pred             HHHHHHHHhcCCccCCCHHHHhhC
Confidence            999999999999999999999874

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-43  Score=344.40  Aligned_cols=252  Identities=25%  Similarity=0.385  Sum_probs=207.9

Q ss_pred             ccccccCCCCCCcEEEEEEeCC--C----cEEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           59 ENIVSEHGEKAPNVVYKGKLEN--Q----FRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~~--~----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      -.+...||+|+||.||.|...+  +    ..||||.+.+.. .....+|.+|..+|+.++|||||+++|++.+....+|+
T Consensus       694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~  773 (1025)
T KOG1095|consen  694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLIL  773 (1025)
T ss_pred             eEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEE
Confidence            3455678999999999998543  3    349999998764 34467899999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcC-----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          132 AEYMPNDTLAKHLFHW-----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~-----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      +|||.+|+|..+|++.     ....++....+.++.|||+|+.||+++ +.|||||.+.|+||+....|||+|||+|+..
T Consensus       774 leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~-~fvHRDLAaRNCLL~~~r~VKIaDFGlArDi  852 (1025)
T KOG1095|consen  774 LEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK-HFVHRDLAARNCLLDERRVVKIADFGLARDI  852 (1025)
T ss_pred             ehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC-CCcCcchhhhheeecccCcEEEcccchhHhh
Confidence            9999999999999863     145789999999999999999999999 9999999999999999999999999999954


Q ss_pred             CCCCCc------CCCccccCcccccCCCCCCccchhhHHHHHHHHHhCC-CCCCcchhHHHhhhhhhhhccccccCCCCh
Q 018244          207 RDGRSY------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK-HIPPSHALDLIRDRNIQTLTDSCLEGQFSS  279 (359)
Q Consensus       207 ~~~~~~------~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (359)
                      .+..-+      .-...|||||.+..+.++.++|||||||++||++|.. .|++........    ....... +...|.
T Consensus       853 y~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~----~~~~~gg-RL~~P~  927 (1025)
T KOG1095|consen  853 YDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVL----LDVLEGG-RLDPPS  927 (1025)
T ss_pred             hhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHH----HHHHhCC-ccCCCC
Confidence            433211      1125799999999999999999999999999999955 444443222221    1111222 445677


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          280 DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       280 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      .++..+.+||.+||+.+|++||++..|++.+..+...
T Consensus       928 ~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~  964 (1025)
T KOG1095|consen  928 YCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA  964 (1025)
T ss_pred             CCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence            8899999999999999999999999999988887653

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=6.5e-42  Score=303.87  Aligned_cols=248  Identities=20%  Similarity=0.310  Sum_probs=204.0

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      ..|++.+.||+|+||.||++...++..+|+|.+.... .....+.+|+++++.++|+||+++++++.. ...+++|||++
T Consensus         6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~   83 (260)
T cd05073           6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMA   83 (260)
T ss_pred             cceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCC
Confidence            3577888899999999999997777789999887543 235678899999999999999999999877 77899999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----C
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S  211 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----~  211 (359)
                      +++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||.+.......     .
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~  162 (260)
T cd05073          84 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG  162 (260)
T ss_pred             CCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccC
Confidence            99999999764556788999999999999999999999 99999999999999999999999999987654322     1


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ..++..|+|||++....++.++|+||||+++|++++ |..||...............     .....+...+.++.+++.
T Consensus       163 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~  237 (260)
T cd05073         163 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-----YRMPRPENCPEELYNIMM  237 (260)
T ss_pred             CcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-----CCCCCcccCCHHHHHHHH
Confidence            223467999999998889999999999999999999 78777654332222211111     111123445678999999


Q ss_pred             HhcccCCCCCCCHHHHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTALVT  312 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~L~~  312 (359)
                      +||+.+|++||++.+++..|+.
T Consensus       238 ~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         238 RCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHcccCcccCcCHHHHHHHHhc
Confidence            9999999999999999998875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=5.5e-42  Score=305.53  Aligned_cols=250  Identities=22%  Similarity=0.299  Sum_probs=203.0

Q ss_pred             CcccccccCCCCCCcEEEEEEeC----CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      .+|++.+.||+|+||.||+|...    .+..+|+|.+..... ...+.+.+|+.+++.++||||+++++++...+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            45677888999999999999853    234799999876432 2345789999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCC
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS  211 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~  211 (359)
                      |||+++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus        84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd05066          84 TEYMENGSLDAFLRK-HDGQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  161 (267)
T ss_pred             EEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeehhhchhcEEECCCCeEEeCCCCcccccccccc
Confidence            999999999999964 345689999999999999999999999 999999999999999999999999999886543321


Q ss_pred             -------cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          212 -------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       212 -------~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                             ..++..|+|||.+.+..++.++|+||||+++|++++ |..|+...............     .....+...+.
T Consensus       162 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~  236 (267)
T cd05066         162 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG-----YRLPAPMDCPA  236 (267)
T ss_pred             eeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCC-----CcCCCCCCCCH
Confidence                   112457999999998889999999999999999886 88877544322221111111     11122334567


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      .+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       237 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         237 ALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             HHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            899999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=7e-43  Score=320.38  Aligned_cols=236  Identities=19%  Similarity=0.234  Sum_probs=191.5

Q ss_pred             cCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEecCCCC
Q 018244           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      .||+|+||.||+|.. .++..||+|++.....   ...+.+.+|+.++..+ +|+||+++++++...+..++||||+++|
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   81 (327)
T cd05617           2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG   81 (327)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence            479999999999984 5678999999986432   2345578899999888 6999999999999999999999999999


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----CCCcCC
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----~~~~~~  214 (359)
                      +|..++.  ....+++..+..++.|++.||+|||++ +++||||||+|||++.++.+||+|||+++....    .....|
T Consensus        82 ~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (327)
T cd05617          82 DLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHER-GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCG  158 (327)
T ss_pred             cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccC
Confidence            9998886  345799999999999999999999999 999999999999999999999999999875321    223568


Q ss_pred             CccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHH---HhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL---IRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       215 t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      |+.|+|||++.+..++.++||||||+++|+|++|..||.......   ............  ....+...+..+.+++.+
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li~~  236 (327)
T cd05617         159 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK--PIRIPRFLSVKASHVLKG  236 (327)
T ss_pred             CcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC--CCCCCCCCCHHHHHHHHH
Confidence            999999999998899999999999999999999999885321100   000011111111  122445567789999999


Q ss_pred             hcccCCCCCCCHH
Q 018244          292 CLQYEPRERPNPR  304 (359)
Q Consensus       292 cl~~dp~~Rps~~  304 (359)
                      ||+.||++|+++.
T Consensus       237 ~L~~dP~~R~~~~  249 (327)
T cd05617         237 FLNKDPKERLGCQ  249 (327)
T ss_pred             HhccCHHHcCCCC
Confidence            9999999999853

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=2e-42  Score=321.06  Aligned_cols=248  Identities=15%  Similarity=0.205  Sum_probs=196.1

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeC------C
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------D  126 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~  126 (359)
                      ...|.+++.||+|+||.||+|.. ..+..||+|.+....  ......+.+|+.+++.++||||+++++++...      .
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   95 (355)
T cd07874          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ   95 (355)
T ss_pred             hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence            45788889999999999999984 468899999997543  22345678899999999999999999988654      3


Q ss_pred             cceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      ..++||||+++ +|.+.+.    ..+++..+..++.|++.||.|||++ |++||||||+|||++.++.+||+|||+++..
T Consensus        96 ~~~lv~e~~~~-~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDikp~Nill~~~~~~kl~Dfg~~~~~  169 (355)
T cd07874          96 DVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTA  169 (355)
T ss_pred             eeEEEhhhhcc-cHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHHEEECCCCCEEEeeCcccccC
Confidence            46999999976 6777663    2488999999999999999999999 9999999999999999999999999999865


Q ss_pred             CCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhh----------------
Q 018244          207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT----------------  267 (359)
Q Consensus       207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~----------------  267 (359)
                      ...   ....+|..|+|||++.+..++.++||||||+++|+|++|+.||...............                
T Consensus       170 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (355)
T cd07874         170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV  249 (355)
T ss_pred             CCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHH
Confidence            443   2346789999999999888999999999999999999999988654321111100000                


Q ss_pred             --hccc----------cc--------cCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          268 --LTDS----------CL--------EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       268 --~~~~----------~~--------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                        ....          ..        ........+.++.+|+.+||+.||++|||+.+++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             HHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence              0000          00        000112235678999999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=1.4e-42  Score=312.31  Aligned_cols=248  Identities=19%  Similarity=0.271  Sum_probs=200.6

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc---hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      |++.+.||+|+||+||++.. .+++.+|+|.+......   ....+.+|+.+++.++|+|++.+++.+...+..++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            34556679999999999984 46889999998754322   234577899999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC---C
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---S  211 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~---~  211 (359)
                      +.+++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......   .
T Consensus        82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  160 (285)
T cd05630          82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG  160 (285)
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccC
Confidence            9999999988654455789999999999999999999999 99999999999999999999999999987654332   2


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ..|+..|+|||.+.+..++.++||||||+++|+|++|..||.......... ........ .....+...+.++.+|+.+
T Consensus       161 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~li~~  238 (285)
T cd05630         161 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE-EVERLVKE-VQEEYSEKFSPDARSLCKM  238 (285)
T ss_pred             CCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHH-HHHhhhhh-hhhhcCccCCHHHHHHHHH
Confidence            467899999999998889999999999999999999999887532211110 11111111 1112334566789999999


Q ss_pred             hcccCCCCCCC-----HHHHHHH
Q 018244          292 CLQYEPRERPN-----PRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rps-----~~~il~~  309 (359)
                      ||+.||++|||     +.+++++
T Consensus       239 ~l~~~p~~R~s~~~~~~~~~~~h  261 (285)
T cd05630         239 LLCKDPKERLGCQGGGAREVKEH  261 (285)
T ss_pred             HhhcCHHHccCCCCCchHHHHcC
Confidence            99999999999     7888764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=5.2e-42  Score=303.62  Aligned_cols=246  Identities=18%  Similarity=0.187  Sum_probs=205.2

Q ss_pred             cccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .|+.++.||.|+||.||.+. ..++..+++|.+....  ......+.+|+++++.++|+||+++++++.+.+..+++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            36778888999999999998 4568899999987543  23355688999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----  210 (359)
                      +++++|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||++++++.+||+|||++.......    
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~  159 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA-GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAE  159 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCChHhEEEeCCCCEEECcCcceEEccccccccc
Confidence            9999999999754456789999999999999999999999 99999999999999999999999999987654332    


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ...+++.|+|||.+.+..++.++||||||+++|+|++|..||..............    .. ....+...+.++.+++.
T Consensus       160 ~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~i~  234 (256)
T cd08221         160 TVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQ----GN-YTPVVSVYSSELISLVH  234 (256)
T ss_pred             ccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc----CC-CCCCccccCHHHHHHHH
Confidence            34578899999999888889999999999999999999988865433222211111    11 11122445678999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~  309 (359)
                      +||..+|++|||+.++++.
T Consensus       235 ~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         235 SLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             HHcccCcccCCCHHHHhhC
Confidence            9999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-43  Score=327.84  Aligned_cols=241  Identities=18%  Similarity=0.301  Sum_probs=205.1

Q ss_pred             cCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCHhh
Q 018244           64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK  142 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~  142 (359)
                      .||+|.||+||-|+ ..++.++|||.+........+.+.+||.+.+.|+|.|||+++|.+..++++-|.||-++||+|.+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            46999999999999 56688999999998776777788999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCC--CHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC-CCCCeEEeccCCcccCCC----CCCcCCC
Q 018244          143 HLFHWETQPM--KWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRD----GRSYSTN  215 (359)
Q Consensus       143 ~l~~~~~~~l--~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~-~~~~~kl~DFg~a~~~~~----~~~~~~t  215 (359)
                      +++. +=+++  ++.++..+..||++||.|||.+ .|||||||-+|||++ -.|.+||+|||.++....    ..++.||
T Consensus       662 LLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen-~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGT  739 (1226)
T KOG4279|consen  662 LLRS-KWGPLKDNESTMNFYTKQILEGLKYLHEN-KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGT  739 (1226)
T ss_pred             HHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhc-ceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccc
Confidence            9965 44556  7889999999999999999999 999999999999997 478999999998876543    3467899


Q ss_pred             ccccCcccccCCC--CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhc
Q 018244          216 LAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL  293 (359)
Q Consensus       216 ~~y~aPE~~~~~~--~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  293 (359)
                      ..|||||++..+.  |..++|||||||++.||.||++||..-.......-...   .-..-+..|.+.+.+++.+|.+|+
T Consensus       740 LQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVG---myKvHP~iPeelsaeak~FilrcF  816 (1226)
T KOG4279|consen  740 LQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVG---MYKVHPPIPEELSAEAKNFILRCF  816 (1226)
T ss_pred             hhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhc---ceecCCCCcHHHHHHHHHHHHHHc
Confidence            9999999998764  99999999999999999999998864322211111111   111234567889999999999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 018244          294 QYEPRERPNPRSLVTA  309 (359)
Q Consensus       294 ~~dp~~Rps~~~il~~  309 (359)
                      ..||.+||+++++|..
T Consensus       817 epd~~~R~sA~~LL~D  832 (1226)
T KOG4279|consen  817 EPDPCDRPSAKDLLQD  832 (1226)
T ss_pred             CCCcccCccHHHhccC
Confidence            9999999999999864

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=8.3e-42  Score=304.73  Aligned_cols=246  Identities=21%  Similarity=0.254  Sum_probs=190.1

Q ss_pred             cCCCCCCcEEEEEEeCC---CcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCC
Q 018244           64 EHGEKAPNVVYKGKLEN---QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs  139 (359)
                      .||+|+||.||+|...+   +..+|+|.+...... ....+.+|+.+++.++||||+++++++.+....++||||+++|+
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD   81 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence            57999999999998543   457999998765432 23468889999999999999999999999999999999999999


Q ss_pred             HhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC------
Q 018244          140 LAKHLFHWE---TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR------  210 (359)
Q Consensus       140 L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~------  210 (359)
                      |.+++....   ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.......      
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~  160 (269)
T cd05087          82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN-NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPD  160 (269)
T ss_pred             HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEEcCCCcEEECCccccccccCcceeecCC
Confidence            999986422   23467788889999999999999999 99999999999999999999999999987543321      


Q ss_pred             CcCCCccccCcccccCC-------CCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHH
Q 018244          211 SYSTNLAFTPPEYLRTG-------RVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~-------~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                      ...++..|+|||++.+.       .++.++||||||+++|||++ |..||.............................+
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (269)
T cd05087         161 QLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLS  240 (269)
T ss_pred             CcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCC
Confidence            23456789999988642       35789999999999999996 88887654322221111111111111111122345


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~~L~  311 (359)
                      ..+.+++..|| .+|++|||+++|+..|.
T Consensus       241 ~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         241 DRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             hHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            67899999999 68999999999998764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=5.2e-42  Score=307.39  Aligned_cols=248  Identities=20%  Similarity=0.304  Sum_probs=200.5

Q ss_pred             cccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .|.+++.||+|++|.||+|...      .+..||+|.+...... ....+.+|+.+++.++|+||+++++++.+....++
T Consensus         7 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   86 (277)
T cd05036           7 SITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFI   86 (277)
T ss_pred             HcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEE
Confidence            4667788899999999999864      3568999988754433 24568899999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC---CeEEeccCC
Q 018244          131 VAEYMPNDTLAKHLFHWE-----TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFGL  202 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~---~~kl~DFg~  202 (359)
                      ||||+++++|.+++....     ...+++..+..++.||+.||+|||++ +++|+||||+||+++.++   .+||+|||+
T Consensus        87 v~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~nil~~~~~~~~~~kl~dfg~  165 (277)
T cd05036          87 LLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN-HFIHRDIAARNCLLTCKGPGRVAKIADFGM  165 (277)
T ss_pred             EEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchheEEEeccCCCcceEeccCcc
Confidence            999999999999986432     12589999999999999999999999 999999999999998654   599999999


Q ss_pred             cccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccC
Q 018244          203 MKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEG  275 (359)
Q Consensus       203 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  275 (359)
                      ++......      ....+..|+|||++.+..++.++|||||||++|+|++ |..||...........     .......
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~-----~~~~~~~  240 (277)
T cd05036         166 ARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEF-----VTGGGRL  240 (277)
T ss_pred             ccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-----HHcCCcC
Confidence            88653221      1222457999999998889999999999999999997 8877765433322211     1111122


Q ss_pred             CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 018244          276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~  311 (359)
                      ..+...+..+.+++.+||+.+|++|||+.++++.|.
T Consensus       241 ~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         241 DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            234456678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=3.5e-42  Score=308.82  Aligned_cols=245  Identities=18%  Similarity=0.238  Sum_probs=197.8

Q ss_pred             cccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      +|++++.||+|+||.||+|. ..++..||+|.+..... .....+.+|++++++++||||+++++++...+..++||||+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            46778889999999999998 45788999999875532 23456889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--CCcC
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS  213 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--~~~~  213 (359)
                      ++++|..+.      .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......  ....
T Consensus        82 ~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~  154 (279)
T cd06619          82 DGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSL-KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYV  154 (279)
T ss_pred             CCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCC
Confidence            999986543      478889999999999999999999 9999999999999999999999999998765433  3456


Q ss_pred             CCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHH---hhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI---RDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       214 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ++..|+|||++.+..++.++|+||||+++|+|++|..||........   .....................+.++.+++.
T Consensus       155 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  234 (279)
T cd06619         155 GTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFIT  234 (279)
T ss_pred             CChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHH
Confidence            78899999999988899999999999999999999988754211100   000111111111111112235678999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~  309 (359)
                      +||+.||++||++++++++
T Consensus       235 ~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         235 QCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             HHhhCChhhCCCHHHHhcC
Confidence            9999999999999999875

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.8e-43  Score=314.05  Aligned_cols=244  Identities=17%  Similarity=0.254  Sum_probs=209.8

Q ss_pred             cccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCch--HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      -|.+-+.||+|-|++|-+|+ .-.|..||||++.+.....  ...+++|++.|+.++|||||+++++......+|||.|+
T Consensus        19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL   98 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL   98 (864)
T ss_pred             eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence            35666778999999999998 4578999999998765443  34689999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC-CCCeEEeccCCcccCCCCC---
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRDGR---  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~-~~~~kl~DFg~a~~~~~~~---  210 (359)
                      -++|+|.+||.. ....+.+....+++.||+.|+.|+|+. ++|||||||+||.+.+ -|-|||+|||++..+.++.   
T Consensus        99 GD~GDl~DyImK-He~Gl~E~La~kYF~QI~~AI~YCHqL-HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~  176 (864)
T KOG4717|consen   99 GDGGDLFDYIMK-HEEGLNEDLAKKYFAQIVHAISYCHQL-HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLT  176 (864)
T ss_pred             cCCchHHHHHHh-hhccccHHHHHHHHHHHHHHHHHHhhh-hhhcccCCcceeEEeeecCceEeeeccccccCCCcchhh
Confidence            999999999986 345799999999999999999999999 9999999999998864 5889999999999887764   


Q ss_pred             CcCCCccccCcccccCCCCCC-ccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTP-ESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~-~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ..+|++.|.|||++.+..|+. ++||||||||||.|++|+.||+...-..    .+-.+++..  ...|...+.++++||
T Consensus       177 TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE----TLTmImDCK--YtvPshvS~eCrdLI  250 (864)
T KOG4717|consen  177 TSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE----TLTMIMDCK--YTVPSHVSKECRDLI  250 (864)
T ss_pred             cccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh----hhhhhhccc--ccCchhhhHHHHHHH
Confidence            567899999999999999875 7899999999999999999987543221    222233322  245788999999999


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 018244          290 SRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~  309 (359)
                      ..||..||.+|.|.++|...
T Consensus       251 ~sMLvRdPkkRAslEeI~s~  270 (864)
T KOG4717|consen  251 QSMLVRDPKKRASLEEIVST  270 (864)
T ss_pred             HHHHhcCchhhccHHHHhcc
Confidence            99999999999999999864

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.8e-42  Score=301.58  Aligned_cols=241  Identities=27%  Similarity=0.414  Sum_probs=199.1

Q ss_pred             cCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCHhh
Q 018244           64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK  142 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~  142 (359)
                      .||.|+||.||+|...+++.||+|.+...... ....+.+|+++++.++|+||+++++++......++||||+.+++|.+
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~   81 (251)
T cd05041           2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT   81 (251)
T ss_pred             ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence            57999999999999766889999998865443 45678999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCC------cCCCc
Q 018244          143 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS------YSTNL  216 (359)
Q Consensus       143 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~------~~~t~  216 (359)
                      ++.. ....+++..+..++.+++.||.|||++ +++|+||||+||+++.++.++|+|||++........      ...+.
T Consensus        82 ~l~~-~~~~~~~~~~~~~~~~~~~~l~~lH~~-~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~  159 (251)
T cd05041          82 FLRK-KKNRLTVKKLLQMSLDAAAGMEYLESK-NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPI  159 (251)
T ss_pred             HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCccee
Confidence            9864 344688999999999999999999999 999999999999999999999999999876542221      12245


Q ss_pred             cccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhccc
Q 018244          217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY  295 (359)
Q Consensus       217 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  295 (359)
                      .|+|||.+.++.++.++|+||||+++|+|+| |..|+.............     .......+...+.++.+++.+||..
T Consensus       160 ~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~~~l~~  234 (251)
T cd05041         160 KWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE-----SGYRMPAPQLCPEEIYRLMLQCWAY  234 (251)
T ss_pred             ccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHh-----cCCCCCCCccCCHHHHHHHHHHhcc
Confidence            7999999988889999999999999999999 666665443222221111     1111223345667899999999999


Q ss_pred             CCCCCCCHHHHHHHHH
Q 018244          296 EPRERPNPRSLVTALV  311 (359)
Q Consensus       296 dp~~Rps~~~il~~L~  311 (359)
                      +|++|||+.++++.|+
T Consensus       235 ~p~~Rp~~~ell~~l~  250 (251)
T cd05041         235 DPENRPSFSEIYNELQ  250 (251)
T ss_pred             ChhhCcCHHHHHHHhh
Confidence            9999999999999875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.4e-42  Score=303.12  Aligned_cols=249  Identities=14%  Similarity=0.162  Sum_probs=204.2

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .+|.+.+.+|.|+||.||+|.. .++..+|+|.+........+.+.+|+++++.++||||+++++++......+++|||+
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~   82 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC   82 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence            3577888899999999999985 457889999998766556678899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CC
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~  211 (359)
                      .+++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++......    ..
T Consensus        83 ~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~  160 (262)
T cd06613          83 GGGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHET-GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKS  160 (262)
T ss_pred             CCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCChhhEEECCCCCEEECccccchhhhhhhhcccc
Confidence            99999998864 235789999999999999999999999 9999999999999999999999999998765432    23


Q ss_pred             cCCCccccCcccccCC---CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTG---RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                      ..++..|+|||.+.+.   .++.++|+||||+++|+|++|..|+................... .........+.++.++
T Consensus       161 ~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l  239 (262)
T cd06613         161 FIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPP-PKLKDKEKWSPVFHDF  239 (262)
T ss_pred             ccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC-ccccchhhhhHHHHHH
Confidence            4567889999999876   78899999999999999999998876543221111111100000 0111234457789999


Q ss_pred             HHHhcccCCCCCCCHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~  308 (359)
                      +.+||..+|.+|||+.+++.
T Consensus       240 i~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         240 IKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             HHHHcCCChhhCCCHHHHhc
Confidence            99999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=6.3e-42  Score=303.06  Aligned_cols=247  Identities=21%  Similarity=0.331  Sum_probs=202.7

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      ..++.+.+.||.|+||.||+|.+.++..+|+|.+..... ....+.+|+++++.++|||++++++++......++||||+
T Consensus         3 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (256)
T cd05112           3 PSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM   81 (256)
T ss_pred             hhHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence            356778889999999999999977677899999875432 3457889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----  210 (359)
                      .+++|.+++.. ....+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.......     
T Consensus        82 ~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~  159 (256)
T cd05112          82 EHGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESS-NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST  159 (256)
T ss_pred             CCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccccceEEEcCCCeEEECCCcceeecccCcccccC
Confidence            99999999864 345689999999999999999999999 99999999999999999999999999987543321     


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ...++..|+|||.+.++.++.++||||||+++|+|++ |..||...............     .....+...+..+.+|+
T Consensus       160 ~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~  234 (256)
T cd05112         160 GTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAG-----FRLYKPRLASQSVYELM  234 (256)
T ss_pred             CCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCC-----CCCCCCCCCCHHHHHHH
Confidence            1223568999999998889999999999999999998 88777654332222211110     11111233467899999


Q ss_pred             HHhcccCCCCCCCHHHHHHHH
Q 018244          290 SRCLQYEPRERPNPRSLVTAL  310 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~L  310 (359)
                      .+||+.+|++|||+.++++.|
T Consensus       235 ~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         235 QHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             HHHcccChhhCCCHHHHHHhh
Confidence            999999999999999999876

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-44  Score=305.26  Aligned_cols=244  Identities=17%  Similarity=0.228  Sum_probs=210.1

Q ss_pred             ccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCC
Q 018244           59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  137 (359)
                      +.++++||+|+||.||+|. ...|..+|+|.+...  .+.+++..|+.++++++.+++|+++|.|-....++||||||..
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA  112 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA  112 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence            4688899999999999998 457999999999864  4578899999999999999999999999999999999999999


Q ss_pred             CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----CCCcC
Q 018244          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS  213 (359)
Q Consensus       138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----~~~~~  213 (359)
                      |++.+.++. +..++++..+..+++..+.||+|||.. .-+|||||+.|||++-+|.+||+|||.|....+    .+...
T Consensus       113 GSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~-~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVI  190 (502)
T KOG0574|consen  113 GSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDL-KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVI  190 (502)
T ss_pred             CcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHH-HHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccc
Confidence            999998865 567899999999999999999999998 889999999999999999999999999987654    35678


Q ss_pred             CCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhc
Q 018244          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL  293 (359)
Q Consensus       214 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  293 (359)
                      ||+-|||||++..-.|+.++||||||++..||..|++|+.+-..  + ...+.....+.....-|..++.++.+++++||
T Consensus       191 GTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP--M-RAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CL  267 (502)
T KOG0574|consen  191 GTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP--M-RAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCL  267 (502)
T ss_pred             cCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc--c-ceeEeccCCCCCCCCChHhhhhHHHHHHHHHh
Confidence            99999999999999999999999999999999999987754321  1 11111122222222345678999999999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 018244          294 QYEPRERPNPRSLVTA  309 (359)
Q Consensus       294 ~~dp~~Rps~~~il~~  309 (359)
                      -+.|++|-|+.+++++
T Consensus       268 iK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  268 IKKPEERKTALRLCEH  283 (502)
T ss_pred             cCCHHHHHHHHHHhhh
Confidence            9999999999998874

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=5.6e-42  Score=309.96  Aligned_cols=254  Identities=19%  Similarity=0.275  Sum_probs=200.6

Q ss_pred             CcccccccCCCCCCcEEEEEEeCC-----------------CcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLEN-----------------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANL  118 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~  118 (359)
                      .+|++++.||+|+||.||+|...+                 +..||+|.+...... ..+.+.+|+++++.++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   84 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL   84 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            467889999999999999987532                 245899998865433 35678899999999999999999


Q ss_pred             cceeeeCCcceEEEecCCCCCHhhhhhcCC---------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee
Q 018244          119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF  189 (359)
Q Consensus       119 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll  189 (359)
                      ++++...+..+++|||+++++|.+++....         ...+++..++.++.|++.||+|||+. +++|+||||+||++
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~-~i~H~dlkp~Nili  163 (296)
T cd05051          85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL-NFVHRDLATRNCLV  163 (296)
T ss_pred             EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc-Cccccccchhceee
Confidence            999999999999999999999999986432         12689999999999999999999999 99999999999999


Q ss_pred             CCCCCeEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh--CCCCCCcchhHHHh
Q 018244          190 DDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS--GKHIPPSHALDLIR  261 (359)
Q Consensus       190 ~~~~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt--g~~p~~~~~~~~~~  261 (359)
                      ++++.++|+|||++.......      ...++..|+|||.+.+..++.++||||||+++|+|++  +..|+.........
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~  243 (296)
T cd05051         164 GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVI  243 (296)
T ss_pred             cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHH
Confidence            999999999999987643221      2334678999999998889999999999999999998  44555432221111


Q ss_pred             hhhhhhhc--cccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 018244          262 DRNIQTLT--DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       262 ~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~  311 (359)
                      ........  ........+...+.++.+++.+||+.||++|||+.++++.|+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         244 ENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             HHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            11111100  000111123345678999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=6.9e-42  Score=305.17  Aligned_cols=245  Identities=20%  Similarity=0.280  Sum_probs=187.8

Q ss_pred             cCCCCCCcEEEEEEeCC---CcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCC
Q 018244           64 EHGEKAPNVVYKGKLEN---QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs  139 (359)
                      +||+|+||.||+|...+   ...+|+|.+...... ....+.+|+..++.++|+||+++++.+......++||||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            57999999999997433   346888887654322 24567899999999999999999999999999999999999999


Q ss_pred             HhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC------C
Q 018244          140 LAKHLFHWE---TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------R  210 (359)
Q Consensus       140 L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~------~  210 (359)
                      |.+++....   ....++..+..++.||+.||+|||++ +++||||||+||++++++.+||+|||++......      .
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~  160 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA-DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKD  160 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc-CEecccccHhheEecCCCcEEEeccccccccccchheeccC
Confidence            999986532   23356788899999999999999999 9999999999999999999999999998653222      2


Q ss_pred             CcCCCccccCcccccC-------CCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHH
Q 018244          211 SYSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~-------~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                      ...++..|+|||++..       ..++.++||||||+++|+|++ |..|+.........................+...+
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (269)
T cd05042         161 CHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYS  240 (269)
T ss_pred             CCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCC
Confidence            2234567999998753       346789999999999999999 56565443221111111111111111122334566


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVTAL  310 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~~L  310 (359)
                      ..+.+++..|| .||++|||+++|++.|
T Consensus       241 ~~~~~~~~~~~-~dp~~Rpt~~~v~~~l  267 (269)
T cd05042         241 DRWYEVMQFCW-LDPETRPTAEEVHELL  267 (269)
T ss_pred             HHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence            77889999999 5999999999999876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=8.2e-42  Score=311.66  Aligned_cols=254  Identities=22%  Similarity=0.316  Sum_probs=204.6

Q ss_pred             cccccccCCCCCCcEEEEEEeC--------CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcC-CCcccccccceeeeCCc
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDE  127 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~  127 (359)
                      +|.+.+.||+|+||.||+|...        ....+|+|.+..... .....+.+|+++++.+ .||||+++++++.....
T Consensus        13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~   92 (314)
T cd05099          13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGP   92 (314)
T ss_pred             HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCc
Confidence            4567888999999999999741        245799999875432 2355688999999999 69999999999998889


Q ss_pred             ceEEEecCCCCCHhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV  193 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~  193 (359)
                      .+++|||+++|+|.+++....              ...+++..+..++.|++.||.|||++ |++|+||||+||++++++
T Consensus        93 ~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-gi~H~dlkp~Nill~~~~  171 (314)
T cd05099          93 LYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR-RCIHRDLAARNVLVTEDN  171 (314)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC-CeeeccccceeEEEcCCC
Confidence            999999999999999996532              23588999999999999999999999 999999999999999999


Q ss_pred             CeEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhh
Q 018244          194 NPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQ  266 (359)
Q Consensus       194 ~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~  266 (359)
                      .+||+|||+++......      ...++..|+|||.+.+..++.++||||||+++|+|++ |..||..............
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~  251 (314)
T cd05099         172 VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLRE  251 (314)
T ss_pred             cEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence            99999999997654321      1123457999999998889999999999999999999 7777765433222221111


Q ss_pred             hhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 018244          267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT  317 (359)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~  317 (359)
                           ......+...+.++.+++.+||+.||++|||+.++++.|..+....
T Consensus       252 -----~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~  297 (314)
T cd05099         252 -----GHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV  297 (314)
T ss_pred             -----CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence                 1111233455678999999999999999999999999999886543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=3.7e-42  Score=315.68  Aligned_cols=248  Identities=15%  Similarity=0.149  Sum_probs=193.6

Q ss_pred             ccccCCCC--CCcEEEEEE-eCCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           61 IVSEHGEK--APNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        61 ~~~~lg~G--~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      +++.||+|  +|++||++. ..+|+.||+|.+.....  ...+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            45677888  788999998 45789999999976532  22345778999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC-------
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-------  208 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~-------  208 (359)
                      ++|+|.+++.......+++..+..++.|++.||.|||++ +++||||||+|||++.++.++++||+.......       
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV  160 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence            999999999654455689999999999999999999999 999999999999999999999999986433211       


Q ss_pred             ----CCCcCCCccccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccc-----------
Q 018244          209 ----GRSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS-----------  271 (359)
Q Consensus       209 ----~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~-----------  271 (359)
                          .....++..|+|||++.+  ..++.++|||||||++|+|++|..||...................           
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (327)
T cd08227         161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEE  240 (327)
T ss_pred             cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhh
Confidence                112245678999999976  358899999999999999999999886432211111100000000           


Q ss_pred             -----------------------------cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          272 -----------------------------CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       272 -----------------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                                   ..........++.+.+|+.+||+.||++|||+++++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~  307 (327)
T cd08227         241 LTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  307 (327)
T ss_pred             cccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence                                         00000112346789999999999999999999999874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.5e-42  Score=308.87  Aligned_cols=250  Identities=16%  Similarity=0.222  Sum_probs=204.7

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ....|.+++.||.|+||.||+|.. .++..+|+|.+........+.+.+|+++++.++|+||+++++++..+...++|||
T Consensus         3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd06611           3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE   82 (280)
T ss_pred             chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence            445688999999999999999995 4688999999987655556678899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |+++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......    
T Consensus        83 ~~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~  160 (280)
T cd06611          83 FCDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSH-KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR  160 (280)
T ss_pred             ccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEECCCCCEEEccCccchhhccccccc
Confidence            9999999998864 345699999999999999999999999 9999999999999999999999999987654332    


Q ss_pred             CCcCCCccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHH
Q 018244          210 RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE  284 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~-----~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (359)
                      ....++..|+|||.+.     ...++.++|+||||+++|+|++|+.||.............. ...  .....+...+.+
T Consensus       161 ~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~  237 (280)
T cd06611         161 DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILK-SEP--PTLDQPSKWSSS  237 (280)
T ss_pred             ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhc-CCC--CCcCCcccCCHH
Confidence            2345788999999875     33477899999999999999999988765422211111110 000  011123446678


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          285 LVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       285 l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+++.+||+.+|++|||+.+++++
T Consensus       238 ~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         238 FNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             HHHHHHHHhccChhhCcCHHHHhcC
Confidence            9999999999999999999999875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=6.2e-42  Score=316.17  Aligned_cols=253  Identities=21%  Similarity=0.284  Sum_probs=199.7

Q ss_pred             cccccccCCCCCCcEEEEEEe------CCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcC-CCcccccccceeeeC-Ccc
Q 018244           58 MENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG-DER  128 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-~~~  128 (359)
                      +|++.+.||.|+||.||+|..      .+++.||||.+...... ....+.+|+.++..+ +|+||+++++++... ...
T Consensus         8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~   87 (343)
T cd05103           8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL   87 (343)
T ss_pred             HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCce
Confidence            678899999999999999973      34678999999764322 345688999999999 689999999988654 467


Q ss_pred             eEEEecCCCCCHhhhhhcCC------------------------------------------------------------
Q 018244          129 LLVAEYMPNDTLAKHLFHWE------------------------------------------------------------  148 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~------------------------------------------------------------  148 (359)
                      +++|||+++|+|.+++....                                                            
T Consensus        88 ~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (343)
T cd05103          88 MVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAE  167 (343)
T ss_pred             EEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhh
Confidence            89999999999999986421                                                            


Q ss_pred             -----CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC------CcCCCcc
Q 018244          149 -----TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR------SYSTNLA  217 (359)
Q Consensus       149 -----~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~------~~~~t~~  217 (359)
                           ...+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++.......      ...++..
T Consensus       168 ~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~  246 (343)
T cd05103         168 QEDLYKKVLTLEDLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK  246 (343)
T ss_pred             hhhhhhccCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcc
Confidence                 12367888999999999999999999 99999999999999999999999999987643221      1234567


Q ss_pred             ccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccC
Q 018244          218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE  296 (359)
Q Consensus       218 y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  296 (359)
                      |+|||.+.+..++.++||||||+++|+|++ |..|++..........    ..........+...+.++.+++.+||+.|
T Consensus       247 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~cl~~~  322 (343)
T cd05103         247 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----RLKEGTRMRAPDYTTPEMYQTMLDCWHGE  322 (343)
T ss_pred             eECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHH----HHhccCCCCCCCCCCHHHHHHHHHHccCC
Confidence            999999988889999999999999999997 7777654322111111    11111111222334567999999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 018244          297 PRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       297 p~~Rps~~~il~~L~~~~~  315 (359)
                      |++|||+.++++.|+.+.+
T Consensus       323 p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         323 PSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             hhhCcCHHHHHHHHHHHHh
Confidence            9999999999999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=7.9e-42  Score=304.58  Aligned_cols=248  Identities=21%  Similarity=0.281  Sum_probs=201.0

Q ss_pred             ccccccCCCCCCcEEEEEEeC-CC---cEEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           59 ENIVSEHGEKAPNVVYKGKLE-NQ---FRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      |...+.||+|+||.||+|... ++   ..+|+|.+.... ....+.+.+|+++++.++|+||+++.+++...+..++|||
T Consensus         7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (268)
T cd05063           7 ITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITE   86 (268)
T ss_pred             ceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEE
Confidence            445666799999999999854 33   379999987653 2335678899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCC--
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS--  211 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~--  211 (359)
                      |+++++|.+++.. ....+++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||++........  
T Consensus        87 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~  164 (268)
T cd05063          87 YMENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDM-NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGT  164 (268)
T ss_pred             cCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEEcCCCcEEECCCccceecccccccc
Confidence            9999999999864 345789999999999999999999999 999999999999999999999999999876543211  


Q ss_pred             -----cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          212 -----YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       212 -----~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                           ...+..|+|||++.+..++.++||||||+++|+|++ |..|+..............     ......+...+.++
T Consensus       165 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~~  239 (268)
T cd05063         165 YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAIND-----GFRLPAPMDCPSAV  239 (268)
T ss_pred             eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhc-----CCCCCCCCCCCHHH
Confidence                 112346999999988889999999999999999997 8888765432222211111     11112233456789


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          286 VRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      .+++.+||+.+|++||++.++++.|+++
T Consensus       240 ~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         240 YQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            9999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=9.9e-42  Score=302.85  Aligned_cols=244  Identities=24%  Similarity=0.318  Sum_probs=192.4

Q ss_pred             cCCCCCCcEEEEEEeC----CCcEEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeee-CCcceEEEecCCC
Q 018244           64 EHGEKAPNVVYKGKLE----NQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLVAEYMPN  137 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~  137 (359)
                      .||+|+||.||+|...    +...+|+|.+.... ....+.+.+|+.+++.++||||+++++++.. +...+++|||+.+
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~   81 (262)
T cd05058           2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH   81 (262)
T ss_pred             cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence            4699999999999843    24579999986432 2345678899999999999999999997753 5568999999999


Q ss_pred             CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--------
Q 018244          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--------  209 (359)
Q Consensus       138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--------  209 (359)
                      |+|.+++.. ....+++..+..++.|++.||+|||+. +++|+||||+|||+++++.+||+|||+++.....        
T Consensus        82 ~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  159 (262)
T cd05058          82 GDLRNFIRS-ETHNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH  159 (262)
T ss_pred             CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence            999999864 334567888899999999999999999 9999999999999999999999999998754321        


Q ss_pred             CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCC-CCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI-PPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                      ....++..|+|||.+.+..++.++||||||+++|||++|..| +............    . .......+...+..+.++
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~l  234 (262)
T cd05058         160 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYL----L-QGRRLLQPEYCPDPLYEV  234 (262)
T ss_pred             ccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH----h-cCCCCCCCCcCCHHHHHH
Confidence            122346689999999888899999999999999999996554 4332211111111    1 111111223346789999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHHHhh
Q 018244          289 ASRCLQYEPRERPNPRSLVTALVTLQ  314 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~L~~~~  314 (359)
                      +.+||+.+|++||++.++++.|+.+.
T Consensus       235 i~~cl~~~p~~Rp~~~~il~~l~~~~  260 (262)
T cd05058         235 MLSCWHPKPEMRPTFSELVSRIEQIF  260 (262)
T ss_pred             HHHHcCCChhhCCCHHHHHHHHHHHh
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=9.1e-42  Score=306.18  Aligned_cols=253  Identities=19%  Similarity=0.236  Sum_probs=204.9

Q ss_pred             CcccccccCCCCCCcEEEEEEeCC-----CcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeee-CCcce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~  129 (359)
                      ..|.+.+.||+|+||.||+|...+     +..||+|.+..... ...+.+.+|+.+++.++|+||+++++++.. +...+
T Consensus         6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~   85 (280)
T cd05043           6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPF   85 (280)
T ss_pred             hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCE
Confidence            356677788999999999999654     68899999875432 235568899999999999999999998766 56789


Q ss_pred             EEEecCCCCCHhhhhhcCCC------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCc
Q 018244          130 LVAEYMPNDTLAKHLFHWET------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a  203 (359)
                      +++||+++++|.+++.....      ..+++..+..++.|++.||+|||++ +++|+||||+||++++++.+||+|||++
T Consensus        86 ~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~p~nil~~~~~~~kl~d~g~~  164 (280)
T cd05043          86 VLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR-GVIHKDIAARNCVIDEELQVKITDNALS  164 (280)
T ss_pred             EEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCHhhEEEcCCCcEEECCCCCc
Confidence            99999999999999864322      4689999999999999999999999 9999999999999999999999999999


Q ss_pred             ccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCC
Q 018244          204 KNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQ  276 (359)
Q Consensus       204 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  276 (359)
                      +......      ...++..|+|||++.+..++.++||||||+++|++++ |+.||.............     ......
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-----~~~~~~  239 (280)
T cd05043         165 RDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLK-----DGYRLA  239 (280)
T ss_pred             ccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHH-----cCCCCC
Confidence            8653321      2334668999999988889999999999999999999 888776543222221111     111112


Q ss_pred             CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       277 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      .+..+++++.+++.+||..||++|||+.++++.|+.+.+
T Consensus       240 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~  278 (280)
T cd05043         240 QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA  278 (280)
T ss_pred             CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            233456789999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=6.7e-42  Score=308.36  Aligned_cols=250  Identities=22%  Similarity=0.332  Sum_probs=201.4

Q ss_pred             CcccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      .+|++++.||.|+||.||+|...      ++..+|+|.+...... ....+.+|+.+++.+.||||+++++++..+...+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~   84 (288)
T cd05050           5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC   84 (288)
T ss_pred             HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence            45778889999999999999853      4678999998765432 2456889999999999999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCC--------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee
Q 018244          130 LVAEYMPNDTLAKHLFHWE--------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF  189 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll  189 (359)
                      ++|||+++|+|.+++....                    ...+++..++.++.|++.||.|||++ +++|+||||+||++
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~-~i~H~dl~p~nil~  163 (288)
T cd05050          85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER-KFVHRDLATRNCLV  163 (288)
T ss_pred             EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC-CeecccccHhheEe
Confidence            9999999999999996421                    12478889999999999999999999 99999999999999


Q ss_pred             CCCCCeEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhh
Q 018244          190 DDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRD  262 (359)
Q Consensus       190 ~~~~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~  262 (359)
                      ++++.++|+|||++.......      ....+..|+|||.+.+..++.++||||||+++|+|++ |..||..........
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~  243 (288)
T cd05050         164 GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIY  243 (288)
T ss_pred             cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            999999999999987543221      2233567999999988889999999999999999998 766765433222211


Q ss_pred             hhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 018244          263 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT  312 (359)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~  312 (359)
                      .    +.... ....+...+.++.+|+.+||+.||++|||+.++++.|++
T Consensus       244 ~----~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         244 Y----VRDGN-VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             H----HhcCC-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            1    11111 111234456789999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=8.6e-42  Score=307.70  Aligned_cols=251  Identities=24%  Similarity=0.345  Sum_probs=200.3

Q ss_pred             CcccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      .+|.+++.||+|+||.||+|...      .+..||+|.+..... .....+.+|+.+++.++|+||+++++++......+
T Consensus         6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   85 (288)
T cd05061           6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL   85 (288)
T ss_pred             HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE
Confidence            46778889999999999999743      245799999875432 22345788999999999999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccC
Q 018244          130 LVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG  201 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg  201 (359)
                      +||||+++|+|.+++....        ...+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||
T Consensus        86 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dikp~nili~~~~~~~L~Dfg  164 (288)
T cd05061          86 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFG  164 (288)
T ss_pred             EEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCCChheEEEcCCCcEEECcCC
Confidence            9999999999999996422        13456778899999999999999999 99999999999999999999999999


Q ss_pred             CcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhcccccc
Q 018244          202 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE  274 (359)
Q Consensus       202 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~  274 (359)
                      +++.....      ....++..|+|||.+.+..++.++||||||+++|||++ |..|+.............    .. ..
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~----~~-~~  239 (288)
T cd05061         165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM----DG-GY  239 (288)
T ss_pred             ccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH----cC-CC
Confidence            98754322      12234567999999998889999999999999999998 566665433222221111    11 11


Q ss_pred             CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      ...+...+..+.+++.+||+.||++|||+.++++.|+..
T Consensus       240 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~  278 (288)
T cd05061         240 LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD  278 (288)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence            122334567899999999999999999999999988875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=8.2e-42  Score=305.06  Aligned_cols=245  Identities=14%  Similarity=0.207  Sum_probs=196.4

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-CCcccccccceeeeC------Ccce
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEG------DERL  129 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~------~~~~  129 (359)
                      .|.+.+.||.|+||.||+|.. .++..+|+|.+.... .....+.+|+.++..+ +|+||+++++++...      ...+
T Consensus         7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~   85 (272)
T cd06637           7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW   85 (272)
T ss_pred             hhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEE
Confidence            355667789999999999985 468899999997654 3345788899999998 699999999998753      4578


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      ++|||+++++|.+++.......+++..+..++.|++.||+|||++ +++|+||||+||++++++.++|+|||++......
T Consensus        86 iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~  164 (272)
T cd06637          86 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT  164 (272)
T ss_pred             EEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHEEECCCCCEEEccCCCceecccc
Confidence            999999999999998764556789999999999999999999999 9999999999999999999999999998764322


Q ss_pred             ----CCcCCCccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChH
Q 018244          210 ----RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD  280 (359)
Q Consensus       210 ----~~~~~t~~y~aPE~~~-----~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (359)
                          ....++..|+|||++.     +..++.++||||||+++|+|++|..||...........    .............
T Consensus       165 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~  240 (272)
T cd06637         165 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL----IPRNPAPRLKSKK  240 (272)
T ss_pred             cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH----HhcCCCCCCCCCC
Confidence                2346788999999986     33588899999999999999999988754321111110    0111111112234


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          281 EGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       281 ~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                      .+.++.+|+.+||..||.+|||+.+++.
T Consensus       241 ~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         241 WSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             cCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            5678999999999999999999999876

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-41  Score=303.37  Aligned_cols=245  Identities=22%  Similarity=0.310  Sum_probs=196.0

Q ss_pred             cCCCCCCcEEEEEEeC-CCc--EEEEEEeCCCC-CchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEecCCCC
Q 018244           64 EHGEKAPNVVYKGKLE-NQF--RIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      .||+|+||.||+|... ++.  .+|+|.+.... ....+.+.+|++++.++ +||||+++++++...+..+++|||+++|
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   81 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG   81 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence            4699999999999864 343  57889887533 23345788999999999 7999999999999999999999999999


Q ss_pred             CHhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          139 TLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       139 sL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                      +|.+++....              ...+++..+..++.|++.||+|||+. +++|+||||+||++++++.+||+|||++.
T Consensus        82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~nili~~~~~~kl~dfgl~~  160 (270)
T cd05047          82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVAKIADFGLSR  160 (270)
T ss_pred             cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccccceEEEcCCCeEEECCCCCcc
Confidence            9999986422              13578999999999999999999999 99999999999999999999999999986


Q ss_pred             cCCCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChH
Q 018244          205 NSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD  280 (359)
Q Consensus       205 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (359)
                      .....   .....+..|+|||++....++.++||||||+++|+|++ |..||............     ........+..
T Consensus       161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~-----~~~~~~~~~~~  235 (270)
T cd05047         161 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-----PQGYRLEKPLN  235 (270)
T ss_pred             ccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHH-----hCCCCCCCCCc
Confidence            43211   11223567999999988889999999999999999997 88887554332221111     11111122334


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 018244          281 EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ  314 (359)
Q Consensus       281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~  314 (359)
                      .+.++.+++.+||+.||.+|||+.+++..|+.+.
T Consensus       236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         236 CDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            5678999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=9.8e-42  Score=308.56  Aligned_cols=253  Identities=20%  Similarity=0.291  Sum_probs=198.2

Q ss_pred             cccccccCCCCCCcEEEEEEeC-----------------CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCccccccc
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-----------------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLL  119 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~  119 (359)
                      +|.+.+.||+|+||.||++...                 ++..+|+|.+...... ....+.+|+++++.++|+||++++
T Consensus         6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~   85 (296)
T cd05095           6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLL   85 (296)
T ss_pred             hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence            4678888999999999998532                 2446999999865322 346789999999999999999999


Q ss_pred             ceeeeCCcceEEEecCCCCCHhhhhhcCC---------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC
Q 018244          120 GCCCEGDERLLVAEYMPNDTLAKHLFHWE---------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD  190 (359)
Q Consensus       120 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~  190 (359)
                      +++...+..++||||+++++|.+++....         ...+++..+..++.|++.||+|||+. +++|+||||+||+++
T Consensus        86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dlkp~Nili~  164 (296)
T cd05095          86 AVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL-NFVHRDLATRNCLVG  164 (296)
T ss_pred             EEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC-CeecccCChheEEEc
Confidence            99999999999999999999999986422         12477889999999999999999999 999999999999999


Q ss_pred             CCCCeEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh--CCCCCCcchhHHHhh
Q 018244          191 DDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS--GKHIPPSHALDLIRD  262 (359)
Q Consensus       191 ~~~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt--g~~p~~~~~~~~~~~  262 (359)
                      .++.++|+|||++.......      ...++..|+|||...++.++.++||||||+++|||++  |..|+..........
T Consensus       165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~  244 (296)
T cd05095         165 KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIE  244 (296)
T ss_pred             CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence            99999999999987653322      1223568999999888889999999999999999998  555654332222111


Q ss_pred             hhhhhhcc--ccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 018244          263 RNIQTLTD--SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       263 ~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~  311 (359)
                      ........  .......+..++..+.+|+.+||+.||++|||+.++++.|+
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         245 NTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            11000000  00011122345678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=8.3e-42  Score=307.39  Aligned_cols=250  Identities=17%  Similarity=0.254  Sum_probs=202.8

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      +|++++.||+|+||.||+|... ++..+|+|.+.... ......+.+|+++++.++|+||+++++.+...+..++||||+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            5788999999999999999964 68899999987542 223457889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--CCc
Q 018244          136 PNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSY  212 (359)
Q Consensus       136 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--~~~  212 (359)
                      ++++|.+++.... ...+++..+..++.|++.||.|||+..+++|+||||+||+++.++.++|+|||++......  ...
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  161 (286)
T cd06622          82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTN  161 (286)
T ss_pred             CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccC
Confidence            9999998885421 2378999999999999999999996339999999999999999999999999998765332  234


Q ss_pred             CCCccccCcccccCCC------CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          213 STNLAFTPPEYLRTGR------VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       213 ~~t~~y~aPE~~~~~~------~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                      .++..|+|||.+.+..      ++.++||||||+++|+|++|..||........... ...... ......+...+.++.
T Consensus       162 ~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~  239 (286)
T cd06622         162 IGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQ-LSAIVD-GDPPTLPSGYSDDAQ  239 (286)
T ss_pred             CCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHH-HHHHhh-cCCCCCCcccCHHHH
Confidence            5678999999986543      57899999999999999999998865433222111 111111 112234455788999


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHH
Q 018244          287 RLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +++.+||..+|++||++.++++.
T Consensus       240 ~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         240 DFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             HHHHHHcccCcccCCCHHHHhcC
Confidence            99999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=6.7e-42  Score=302.69  Aligned_cols=247  Identities=25%  Similarity=0.368  Sum_probs=202.6

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      +.+|.+.+.||+|+||.||++.. ++..+|+|.+....  ....+.+|+.+++.++|||++++++++... ..+++|||+
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~   80 (254)
T cd05083           5 LQKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM   80 (254)
T ss_pred             HHHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence            45678888999999999999975 56689999987543  245788999999999999999999998654 579999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-CcCC
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-SYST  214 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-~~~~  214 (359)
                      ++++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++....... ....
T Consensus        81 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  159 (254)
T cd05083          81 SKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK-KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKL  159 (254)
T ss_pred             CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCC
Confidence            999999999765555689999999999999999999999 99999999999999999999999999987654332 2233


Q ss_pred             CccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhc
Q 018244          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL  293 (359)
Q Consensus       215 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  293 (359)
                      +..|+|||.+.+..++.++|+||||+++|+|++ |..||..............     ......+...+..+.+++.+||
T Consensus       160 ~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l  234 (254)
T cd05083         160 PVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEK-----GYRMEPPEGCPADVYVLMTSCW  234 (254)
T ss_pred             CceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhC-----CCCCCCCCcCCHHHHHHHHHHc
Confidence            567999999988889999999999999999998 8877765543332222111     1111223445678999999999


Q ss_pred             ccCCCCCCCHHHHHHHHHH
Q 018244          294 QYEPRERPNPRSLVTALVT  312 (359)
Q Consensus       294 ~~dp~~Rps~~~il~~L~~  312 (359)
                      +.+|++||++++++..|+.
T Consensus       235 ~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         235 ETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             CCChhhCcCHHHHHHHHcc
Confidence            9999999999999988763

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=7.3e-42  Score=338.93  Aligned_cols=255  Identities=19%  Similarity=0.187  Sum_probs=203.5

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc---hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ..|++++.||+|+||.||+|.. .++..||+|++......   ..+.+.+|+++++.++||||+++++++.+.+..+++|
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            4678889999999999999985 45889999999754322   2456889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCC---------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCc
Q 018244          133 EYMPNDTLAKHLFHWE---------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a  203 (359)
                      ||++||+|.+++....         ...+++..+..++.||+.||+|||++ +++||||||+||+++.++.++|+|||++
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~-GIIHRDLKPeNILLd~dg~vKLiDFGLA  160 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK-GVLHRDLKPDNILLGLFGEVVILDWGAA  160 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC-CccccCCchheEEEcCCCCEEEEecCcc
Confidence            9999999999886311         23456778899999999999999999 9999999999999999999999999998


Q ss_pred             ccCCCC----------------------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHh
Q 018244          204 KNSRDG----------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR  261 (359)
Q Consensus       204 ~~~~~~----------------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~  261 (359)
                      ......                      ....||+.|+|||++.+..++.++|||||||++|||+||..||.........
T Consensus       161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~  240 (932)
T PRK13184        161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS  240 (932)
T ss_pred             eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh
Confidence            765110                      1235899999999999989999999999999999999999988653322111


Q ss_pred             hhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhhh
Q 018244          262 DRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP-NPRSLVTALVTLQK  315 (359)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-s~~~il~~L~~~~~  315 (359)
                      ..  .....+. ........+..+.+++.+||+.||++|| +++++++.|+....
T Consensus       241 ~~--~~i~~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq  292 (932)
T PRK13184        241 YR--DVILSPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ  292 (932)
T ss_pred             hh--hhccChh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            11  1111110 0001124567799999999999999996 66777777877654

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=8.7e-42  Score=302.27  Aligned_cols=246  Identities=16%  Similarity=0.181  Sum_probs=202.2

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeC-CcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG-DERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e  133 (359)
                      .|++++.||.|++|.||++.. .+++.+|+|.+.....  ...+.+.+|+++++.++|+|++++++.+... ...+++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            367888999999999999994 4578899999875432  2345688899999999999999999887643 45789999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |+++++|.+++.......+++.++..++.|++.||.+||++ +++|+||||+||+++.++.++|+|||++......    
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~-~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~  159 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK-HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMA  159 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCchhEEEecCCcEEEecccceEEecccCCcc
Confidence            99999999999764456789999999999999999999999 9999999999999999999999999998765432    


Q ss_pred             CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ....+++.|+|||.+.+..++.++||||||+++|+|++|+.||................     ....+...+..+.+++
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li  234 (257)
T cd08223         160 STLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK-----LPPMPKDYSPELGELI  234 (257)
T ss_pred             ccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC-----CCCCccccCHHHHHHH
Confidence            23456789999999998889999999999999999999998886543332221111111     1123345677899999


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 018244          290 SRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+||+.||++|||+.+++.+
T Consensus       235 ~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         235 ATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             HHHhccCcccCCCHHHHhcC
Confidence            99999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=5.1e-42  Score=308.54  Aligned_cols=254  Identities=20%  Similarity=0.267  Sum_probs=205.3

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ..+|++++.||+|+||+||++.. .++..||+|++..... ...+.+.+|+++++.++||||+++++++...+..++|||
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME   83 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence            35688899999999999999984 4688999998875432 235678899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC--CCC
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRS  211 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~--~~~  211 (359)
                      |+++++|.+++.  ....+++..+..++.+++.||.|||+..+++|+||+|+||++++++.++|+|||++.....  ...
T Consensus        84 ~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~  161 (284)
T cd06620          84 FMDCGSLDRIYK--KGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADT  161 (284)
T ss_pred             cCCCCCHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCc
Confidence            999999999886  3456899999999999999999999743899999999999999999999999999865432  223


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHH----h---hhhhhhhccccccCCCC-hHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI----R---DRNIQTLTDSCLEGQFS-SDEGT  283 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~----~---~~~~~~~~~~~~~~~~~-~~~~~  283 (359)
                      ..++..|+|||++.+..++.++||||||+++|+|++|..||........    .   ........... ....+ ...+.
T Consensus       162 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  240 (284)
T cd06620         162 FVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-PPRLPSSDFPE  240 (284)
T ss_pred             cccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-CCCCCchhcCH
Confidence            4678999999999888899999999999999999999998875432100    0   00111111111 11111 23567


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVT  312 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~  312 (359)
                      ++.+|+.+||+.||++|||+.+++++..-
T Consensus       241 ~~~~li~~~l~~dp~~Rpt~~e~~~~~~~  269 (284)
T cd06620         241 DLRDFVDACLLKDPTERPTPQQLCAMPPF  269 (284)
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence            89999999999999999999999986443

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.3e-41  Score=301.40  Aligned_cols=243  Identities=23%  Similarity=0.340  Sum_probs=196.9

Q ss_pred             ccCCCCCCcEEEEEEeC-C---CcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCC
Q 018244           63 SEHGEKAPNVVYKGKLE-N---QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  137 (359)
                      ++||+|+||.||+|... .   +..+|+|.+...... ..+.+.+|+++++.+.|+||+++++++. .+..++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            35799999999999742 2   368999999866542 3557889999999999999999999875 4568999999999


Q ss_pred             CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCc-----
Q 018244          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY-----  212 (359)
Q Consensus       138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~-----  212 (359)
                      |+|.+++..  ...+++..+..++.|++.||.|||.. +++|+||||+||+++.++.++|+|||+++........     
T Consensus        80 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~  156 (257)
T cd05060          80 GPLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT  156 (257)
T ss_pred             CcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhc-CeeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence            999999974  34789999999999999999999999 9999999999999999999999999998865433221     


Q ss_pred             --CCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          213 --STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       213 --~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                        .++..|+|||.+.+..++.++||||||+++|+|++ |..||............     ........+...+..+.+++
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~li  231 (257)
T cd05060         157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAML-----ESGERLPRPEECPQEIYSIM  231 (257)
T ss_pred             CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-----HcCCcCCCCCCCCHHHHHHH
Confidence              12357999999998889999999999999999998 88776543222211111     11111223445667899999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHhh
Q 018244          290 SRCLQYEPRERPNPRSLVTALVTLQ  314 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~L~~~~  314 (359)
                      .+||..+|++|||+.++++.|+.+.
T Consensus       232 ~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         232 LSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             HHHhcCChhhCcCHHHHHHHHHhcc
Confidence            9999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=5.3e-42  Score=319.27  Aligned_cols=248  Identities=15%  Similarity=0.192  Sum_probs=195.8

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeC------C
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------D  126 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~  126 (359)
                      ...|.+++.||+|+||.||+|.. ..+..||||++....  ......+.+|+.+++.++||||+++++++...      .
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~  102 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  102 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence            35788889999999999999984 468889999997542  23345688999999999999999999987543      3


Q ss_pred             cceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      ..++||||+++ +|.+.+.    ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus       103 ~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~  176 (364)
T cd07875         103 DVYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTA  176 (364)
T ss_pred             eEEEEEeCCCC-CHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhC-CeecCCCCHHHEEECCCCcEEEEeCCCcccc
Confidence            57999999976 6777764    2488999999999999999999999 9999999999999999999999999999865


Q ss_pred             CCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcc-------------
Q 018244          207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD-------------  270 (359)
Q Consensus       207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~-------------  270 (359)
                      ...   ....+|..|+|||++.+..++.++|||||||++|+|++|+.||..................             
T Consensus       177 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (364)
T cd07875         177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV  256 (364)
T ss_pred             CCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHH
Confidence            443   2346789999999999889999999999999999999999988654321111111100000             


Q ss_pred             -----cc--c----------------cCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          271 -----SC--L----------------EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       271 -----~~--~----------------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                           ..  .                ........+.++.+|+.+||+.||++|||+.+++++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             HHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence                 00  0                000011134578999999999999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.9e-42  Score=306.02  Aligned_cols=243  Identities=15%  Similarity=0.227  Sum_probs=202.4

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      +|.+++.||.|++|.||+|.. .++..+|+|.+.... ......+.+|+++++.++|+||+++++++.+....++|+||+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC   81 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence            567788889999999999995 468899999987653 334566889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CC
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~  211 (359)
                      ++++|.+++..   ..+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||+++.....    ..
T Consensus        82 ~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~  157 (274)
T cd06609          82 GGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEE-GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT  157 (274)
T ss_pred             CCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence            99999999853   3789999999999999999999999 9999999999999999999999999998776543    23


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChH-HHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD-EGTELVRLAS  290 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~  290 (359)
                      ..++..|+|||.+.+..++.++||||||+++|+|+||..||............     ........+.. .+.++.+++.
T Consensus       158 ~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~  232 (274)
T cd06609         158 FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLI-----PKNNPPSLEGNKFSKPFKDFVS  232 (274)
T ss_pred             ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHh-----hhcCCCCCcccccCHHHHHHHH
Confidence            45678899999999888999999999999999999999887543321111111     11111112222 5678999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~  309 (359)
                      +||..+|++|||+++++++
T Consensus       233 ~~l~~~p~~Rpt~~~il~~  251 (274)
T cd06609         233 LCLNKDPKERPSAKELLKH  251 (274)
T ss_pred             HHhhCChhhCcCHHHHhhC
Confidence            9999999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=6.8e-42  Score=305.07  Aligned_cols=253  Identities=17%  Similarity=0.249  Sum_probs=202.4

Q ss_pred             HHHHhcCCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCc
Q 018244           49 LRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE  127 (359)
Q Consensus        49 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  127 (359)
                      ++.+++++.....+   |+|+||.||+|. ..++..||+|.+........+.+.+|+.+++.++|+||+++++++..++.
T Consensus         3 ~~~~~~~~~~~~~l---g~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   79 (268)
T cd06624           3 YEYEYDENGERVVL---GKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGF   79 (268)
T ss_pred             cccccccCCceEEE---ecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCE
Confidence            34456666665554   999999999998 44678899999987765666788999999999999999999999999999


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCC--CHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC-CCCeEEeccCCcc
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPM--KWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMK  204 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~-~~~~kl~DFg~a~  204 (359)
                      .++|+||+++++|.+++... ...+  ++..+..++.|++.||+|||++ +++|+||||+||+++. ++.++|+|||++.
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~h~dl~p~nil~~~~~~~~~l~dfg~~~  157 (268)
T cd06624          80 FKIFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDN-QIVHRDIKGDNVLVNTYSGVVKISDFGTSK  157 (268)
T ss_pred             EEEEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence            99999999999999998642 2344  8888999999999999999999 9999999999999986 6799999999987


Q ss_pred             cCCCC----CCcCCCccccCcccccCCC--CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCC
Q 018244          205 NSRDG----RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS  278 (359)
Q Consensus       205 ~~~~~----~~~~~t~~y~aPE~~~~~~--~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (359)
                      .....    ....++..|+|||.+.+..  ++.++||||||+++|+|++|+.|+............   ..........+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~  234 (268)
T cd06624         158 RLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFK---VGMFKIHPEIP  234 (268)
T ss_pred             ecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhh---hhhhccCCCCC
Confidence            54322    2345788999999987643  788999999999999999999887543211111000   00001112334


Q ss_pred             hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          279 SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ...++++.+++.+||+.+|++|||+.+++.+
T Consensus       235 ~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         235 ESLSAEAKNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             cccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence            5567889999999999999999999999864

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-42  Score=316.91  Aligned_cols=253  Identities=21%  Similarity=0.295  Sum_probs=210.1

Q ss_pred             ccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchH-HHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCC
Q 018244           59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  137 (359)
                      ..+.++||+|-||.|..+....+..||||.++.....+. +.|.+|+++|.+|+|||||+++|+|..++.+++|+||+.+
T Consensus       540 L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEn  619 (807)
T KOG1094|consen  540 LRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMEN  619 (807)
T ss_pred             eehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhc
Confidence            456788999999999999988889999999998765554 7899999999999999999999999999999999999999


Q ss_pred             CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCc-----
Q 018244          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY-----  212 (359)
Q Consensus       138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~-----  212 (359)
                      |+|.+++..+....+......+|+.||+.|++||.+. ++|||||.+.|+|+|.++++||+|||+++....+..+     
T Consensus       620 GDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~-nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr  698 (807)
T KOG1094|consen  620 GDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL-NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGR  698 (807)
T ss_pred             CcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh-chhhccccccceeecCcccEEecCcccccccccCCceeeecc
Confidence            9999999865444455566778999999999999999 9999999999999999999999999999976555432     


Q ss_pred             -CCCccccCcccccCCCCCCccchhhHHHHHHHHHh--CCCCCCcchhHHHhhhhhhhhccccc---cCCCChHHHHHHH
Q 018244          213 -STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS--GKHIPPSHALDLIRDRNIQTLTDSCL---EGQFSSDEGTELV  286 (359)
Q Consensus       213 -~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~  286 (359)
                       +-..+|||||.+..++++.++|+|+||+++||+++  ...|+.....+...+.. ..+.+...   ....|.-++..+.
T Consensus       699 ~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~-~~~~~~~~~~~~l~~P~~cp~~ly  777 (807)
T KOG1094|consen  699 AVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENA-GEFFRDQGRQVVLSRPPACPQGLY  777 (807)
T ss_pred             eeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhh-hhhcCCCCcceeccCCCcCcHHHH
Confidence             22479999999999999999999999999999854  55566544333333222 22222211   1223556788999


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          287 RLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      ++|..||..|-++|||++++...|+..
T Consensus       778 elml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  778 ELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             HHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            999999999999999999999888754

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=4.1e-42  Score=317.48  Aligned_cols=248  Identities=19%  Similarity=0.250  Sum_probs=195.2

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeC------C
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG------D  126 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~  126 (359)
                      ...|.+++.||.|+||+||+|.. .++..||||.+.....  .....+.+|+++|+.++|+||+++++++...      .
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07878          14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN   93 (343)
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence            35688889999999999999984 5688999999975432  2345677899999999999999999987543      3


Q ss_pred             cceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      ..++++|++ +++|.+++   ....+++..+..++.||+.||.|||++ +|+||||||+||++++++.+||+|||++...
T Consensus        94 ~~~~~~~~~-~~~l~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~  168 (343)
T cd07878          94 EVYLVTNLM-GADLNNIV---KCQKLSDEHVQFLIYQLLRGLKYIHSA-GIIHRDLKPSNVAVNEDCELRILDFGLARQA  168 (343)
T ss_pred             cEEEEeecC-CCCHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecccCChhhEEECCCCCEEEcCCccceec
Confidence            468999998 67898877   345699999999999999999999999 9999999999999999999999999999875


Q ss_pred             CCC-CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh------------------
Q 018244          207 RDG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ------------------  266 (359)
Q Consensus       207 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~------------------  266 (359)
                      ... ....+|..|+|||++.+ ..++.++||||||+++|+|++|..||+.............                  
T Consensus       169 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (343)
T cd07878         169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHA  248 (343)
T ss_pred             CCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhH
Confidence            543 34568899999999876 4688999999999999999999998875422111100000                  


Q ss_pred             -hhccccccCC-------CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          267 -TLTDSCLEGQ-------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       267 -~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                       ..... +...       .....++.+.+|+.+||..||++|||+.+++++
T Consensus       249 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         249 RKYIQS-LPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             HHHhhc-cccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence             00000 0000       001134568899999999999999999999975

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=9.9e-43  Score=308.63  Aligned_cols=245  Identities=25%  Similarity=0.377  Sum_probs=199.9

Q ss_pred             ccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHH--HHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDAR--QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~--~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      |++++.||+|+||+||++... ++..+|+|.+.........  ...+|+.+++.++||||+++++++......++||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            678889999999999999954 5678999999987544332  2456999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC----CCCCC
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS----RDGRS  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~----~~~~~  211 (359)
                      ++++|.+++.  ....+++..+..++.|++.||.+||+. +++|+||||+||++++++.++|+|||.+...    .....
T Consensus        81 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~-~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~  157 (260)
T PF00069_consen   81 PGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSK-GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP  157 (260)
T ss_dssp             TTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHT-TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred             cccccccccc--ccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccc
Confidence            9999999996  456789999999999999999999999 9999999999999999999999999998752    22234


Q ss_pred             cCCCccccCccccc-CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHh---hhhhhhhccccccCCCChHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLR-TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR---DRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       212 ~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                      ..++..|+|||++. +..++.++||||+|+++|+|++|..|+.........   ..........  ...........+.+
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~  235 (260)
T PF00069_consen  158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPS--SSQQSREKSEELRD  235 (260)
T ss_dssp             SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHH--HTTSHTTSHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccc--cccccchhHHHHHH
Confidence            56788999999998 778999999999999999999999888765111111   1111111110  00111122478999


Q ss_pred             HHHHhcccCCCCCCCHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~  308 (359)
                      ++.+||+.||++|||+.++++
T Consensus       236 li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  236 LIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHHHSSSSGGGSTTHHHHHT
T ss_pred             HHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999986

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.3e-41  Score=301.29  Aligned_cols=236  Identities=25%  Similarity=0.392  Sum_probs=190.3

Q ss_pred             cCCCCCCcEEEEEEeCC-C----------cEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           64 EHGEKAPNVVYKGKLEN-Q----------FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      .||+|+||.||+|...+ +          ..+++|.+...... ...+.+|+.+++.++|+||+++++++.. ...++||
T Consensus         2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~   79 (259)
T cd05037           2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE   79 (259)
T ss_pred             cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence            57999999999999654 3          25888887655433 5678899999999999999999999988 7789999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC-------CeEEeccCCccc
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-------NPRLSCFGLMKN  205 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~-------~~kl~DFg~a~~  205 (359)
                      ||+++|+|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++       .++|+|||++..
T Consensus        80 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~  157 (259)
T cd05037          80 EYVKFGPLDVFLHR-EKNNVSLHWKLDVAKQLASALHYLEDK-KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT  157 (259)
T ss_pred             EcCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhhC-CeecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence            99999999999864 233789999999999999999999999 999999999999999887       799999999987


Q ss_pred             CCCCCCcCCCccccCcccccCC--CCCCccchhhHHHHHHHHHhC-CCCCCcchhHHHhhhhhhhhccccccCCCChHHH
Q 018244          206 SRDGRSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSG-KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       206 ~~~~~~~~~t~~y~aPE~~~~~--~~~~~~Di~slG~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                      ........++..|+|||++.+.  .++.++||||||+++|+|++| ..|+.......... ...   .   ....+....
T Consensus       158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~-~~~---~---~~~~~~~~~  230 (259)
T cd05037         158 VLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER-FYQ---D---QHRLPMPDC  230 (259)
T ss_pred             cccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH-HHh---c---CCCCCCCCc
Confidence            6665556677889999999876  689999999999999999996 44443321111110 000   0   011112223


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVTAL  310 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~~L  310 (359)
                      ..+.+++.+||..+|++|||+.++++.|
T Consensus       231 ~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         231 AELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             hHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            7899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.5e-41  Score=302.48  Aligned_cols=242  Identities=18%  Similarity=0.278  Sum_probs=199.0

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCch---------HHHHHHHHHHHhcCCCcccccccceeeeCCcc
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---------ARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  128 (359)
                      |.+.+.||.|++|.||+|.. .++..+|+|.+.......         .+.+.+|+.+++.++||||+++++++...+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            44556789999999999985 467899999887543221         24578899999999999999999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      ++||||+++++|.+++.  ....+++..+..++.|++.||.|||++ +++|+||+|+||++++++.++|+|||.++....
T Consensus        82 ~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~~l~~~l~~lH~~-~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~  158 (267)
T cd06628          82 NIFLEYVPGGSVAALLN--NYGAFEETLVRNFVRQILKGLNYLHNR-GIIHRDIKGANILVDNKGGIKISDFGISKKLEA  158 (267)
T ss_pred             EEEEEecCCCCHHHHHH--hccCccHHHHHHHHHHHHHHHHHHHhc-CcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence            99999999999999996  345689999999999999999999999 999999999999999999999999999876542


Q ss_pred             C----------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCC
Q 018244          209 G----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS  278 (359)
Q Consensus       209 ~----------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (359)
                      .          ....++..|+|||.+.+..++.++|+||||+++|+|++|..||..........    .... ......+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~-~~~~~~~  233 (267)
T cd06628         159 NSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIF----KIGE-NASPEIP  233 (267)
T ss_pred             ccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHH----HHhc-cCCCcCC
Confidence            1          12346788999999998889999999999999999999999886542211111    1111 1122334


Q ss_pred             hHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          279 SDEGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                      ...+..+.+++.+||+.||++||++.++++
T Consensus       234 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         234 SNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             cccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            456788999999999999999999999886

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=1.1e-41  Score=305.29  Aligned_cols=243  Identities=16%  Similarity=0.273  Sum_probs=201.1

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .|..++.||.|+||.||+|.. .++..||+|.+..... ...+.+.+|+++++.++|+||+++++++......++||||+
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence            456777889999999999985 4578899999875432 33456889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----C
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----~  211 (359)
                      ++++|.+++.   ...+++..+..++.|++.||.|||++ +++|+||+|+||++++++.++|+|||++.......    .
T Consensus        85 ~~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~-~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (277)
T cd06642          85 GGGSALDLLK---PGPLEETYIATILREILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT  160 (277)
T ss_pred             CCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcC-CeeccCCChheEEEeCCCCEEEccccccccccCcchhhhc
Confidence            9999999884   45789999999999999999999999 99999999999999999999999999987654332    2


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ..++..|+|||++.+..++.++||||||+++|+|++|..|+..........     ..............+.++.+++.+
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~  235 (277)
T cd06642         161 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF-----LIPKNSPPTLEGQYSKPFKEFVEA  235 (277)
T ss_pred             ccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh-----hhhcCCCCCCCcccCHHHHHHHHH
Confidence            356788999999998889999999999999999999998875432211111     111111122233456789999999


Q ss_pred             hcccCCCCCCCHHHHHHH
Q 018244          292 CLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~  309 (359)
                      ||+.+|++|||+.+++.+
T Consensus       236 ~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         236 CLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             HccCCcccCcCHHHHHHh
Confidence            999999999999999985

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=7.5e-42  Score=310.03  Aligned_cols=252  Identities=17%  Similarity=0.254  Sum_probs=200.1

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      .+..|.+++.||.|+||.||+|.. .++..||+|.+...... ....+.+|+.+++.++|+||+++++++......++||
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~   83 (301)
T cd07873           4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF   83 (301)
T ss_pred             cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence            466789999999999999999985 46789999998754322 2345778999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---  209 (359)
                      ||+++ +|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++......   
T Consensus        84 e~~~~-~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~  160 (301)
T cd07873          84 EYLDK-DLKQYLDD-CGNSINMHNVKLFLFQLLRGLNYCHRR-KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT  160 (301)
T ss_pred             ecccc-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc
Confidence            99974 89888864 345689999999999999999999999 9999999999999999999999999998764322   


Q ss_pred             -CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh-----------hhcc------
Q 018244          210 -RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-----------TLTD------  270 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~-----------~~~~------  270 (359)
                       ....++..|+|||.+.+. .++.++||||||+++|+|++|+.||..............           ....      
T Consensus       161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (301)
T cd07873         161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS  240 (301)
T ss_pred             ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence             223457899999998754 478899999999999999999998875433221110000           0000      


Q ss_pred             ---ccccC----CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          271 ---SCLEG----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       271 ---~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                         +....    ......+.++.+|+.+||+.||.+|||+.+++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h  286 (301)
T cd07873         241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH  286 (301)
T ss_pred             cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence               00000    0112356788999999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=1.7e-41  Score=302.76  Aligned_cols=252  Identities=21%  Similarity=0.285  Sum_probs=203.5

Q ss_pred             CcccccccCCCCCCcEEEEEEeCC----CcEEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      .++.+.+.||.|+||.||+|...+    ...||+|...... ....+.+.+|+.+++.++|+||+++++++.+ ...++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv   84 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV   84 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence            346677788999999999998533    3469999887654 3345678999999999999999999998865 567899


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-  210 (359)
                      |||+++|+|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++...... 
T Consensus        85 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  162 (270)
T cd05056          85 MELAPLGELRSYLQV-NKYSLDLASLILYSYQLSTALAYLESK-RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY  162 (270)
T ss_pred             EEcCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccChheEEEecCCCeEEccCceeeecccccc
Confidence            999999999999964 344689999999999999999999999 99999999999999999999999999987654332 


Q ss_pred             ----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       211 ----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                          ...++..|+|||.+....++.++||||||+++|++++ |..||..............     ......+...+..+
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  237 (270)
T cd05056         163 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIEN-----GERLPMPPNCPPTL  237 (270)
T ss_pred             eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-----CCcCCCCCCCCHHH
Confidence                1223457999999988889999999999999999986 8888765533222111111     11112334566789


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          286 VRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      .+++.+||..+|++|||+.++++.|+.+..+
T Consensus       238 ~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~  268 (270)
T cd05056         238 YSLMTKCWAYDPSKRPRFTELKAQLSDILQE  268 (270)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            9999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.7e-41  Score=303.04  Aligned_cols=251  Identities=18%  Similarity=0.261  Sum_probs=205.1

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CC----cEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQ----FRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~----~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .+|++++.||+|+||.||+|... +|    ..+|+|.+...... ....+.+|+.+++.++|+||+++++++.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            35678888999999999999853 33    26899988765432 34678899999999999999999999877 78999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      ||||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||+++......
T Consensus        86 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~-~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~  163 (279)
T cd05057          86 ITQLMPLGCLLDYVRN-HKDNIGSQYLLNWCVQIAKGMSYLEEK-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE  163 (279)
T ss_pred             EEecCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CEEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence            9999999999999864 344689999999999999999999998 99999999999999999999999999998655332


Q ss_pred             C------cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          211 S------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       211 ~------~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                      .      ..++..|+|||.+....++.++|+||||+++||+++ |..|+..............     ......+...+.
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~  238 (279)
T cd05057         164 KEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEK-----GERLPQPPICTI  238 (279)
T ss_pred             cceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhC-----CCCCCCCCCCCH
Confidence            2      112467999999988889999999999999999998 8888766543333221111     111122334557


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      .+.+++.+||..||++|||+.++++.|..+.+
T Consensus       239 ~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         239 DVYMVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            89999999999999999999999999998755

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-42  Score=319.23  Aligned_cols=235  Identities=17%  Similarity=0.178  Sum_probs=188.7

Q ss_pred             CCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcC---CCcccccccceeeeCCcceEEEecCCC
Q 018244           65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL---RNRRLANLLGCCCEGDERLLVAEYMPN  137 (359)
Q Consensus        65 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~~  137 (359)
                      ||+|+||+||+|.. .++..||+|++.....   ........|..++..+   .||||+++++++...+..++||||+.+
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            59999999999985 4688999999875321   1223455667777665   699999999999999999999999999


Q ss_pred             CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----CCCcC
Q 018244          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS  213 (359)
Q Consensus       138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----~~~~~  213 (359)
                      |+|.+++.  ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.++|+|||++.....    .....
T Consensus        81 g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~-~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  157 (330)
T cd05586          81 GELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKY-DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC  157 (330)
T ss_pred             ChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence            99999886  456789999999999999999999999 999999999999999999999999999875322    22456


Q ss_pred             CCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCC-hHHHHHHHHHHHH
Q 018244          214 TNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-SDEGTELVRLASR  291 (359)
Q Consensus       214 ~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~  291 (359)
                      ||..|+|||++.+. .++.++|||||||++|+|++|..||................      ..++ ...+.++.+++.+
T Consensus       158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~~~~li~~  231 (330)
T cd05586         158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGK------VRFPKNVLSDEGRQFVKG  231 (330)
T ss_pred             CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCC------CCCCCccCCHHHHHHHHH
Confidence            89999999998765 48899999999999999999999987654433322211110      0111 2356789999999


Q ss_pred             hcccCCCCCC----CHHHHHH
Q 018244          292 CLQYEPRERP----NPRSLVT  308 (359)
Q Consensus       292 cl~~dp~~Rp----s~~~il~  308 (359)
                      ||+.||++||    ++.++++
T Consensus       232 ~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         232 LLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             HcCCCHHHCCCCCCCHHHHhc
Confidence            9999999998    5666655

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=7.9e-42  Score=324.14  Aligned_cols=243  Identities=18%  Similarity=0.210  Sum_probs=191.1

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      .|.+.+.||.|+||.||+|... .+..||||....      ..+.+|+++|++++|+||+++++++......++|||++.
T Consensus       170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~  243 (461)
T PHA03211        170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR  243 (461)
T ss_pred             CeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC
Confidence            4778889999999999999954 578899996432      335689999999999999999999999999999999995


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC------C
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------R  210 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~------~  210 (359)
                       ++|.+++.. ....+++..+..|+.|++.||.|||++ +|+||||||+|||++.++.++|+|||+++.....      .
T Consensus       244 -~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~  320 (461)
T PHA03211        244 -SDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGE-GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHY  320 (461)
T ss_pred             -CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CEEECcCCHHHEEECCCCCEEEcccCCceeccccccccccc
Confidence             588888854 344799999999999999999999999 9999999999999999999999999998765332      1


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcch------------hHHHhhhhhh--hhcc------
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA------------LDLIRDRNIQ--TLTD------  270 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~------------~~~~~~~~~~--~~~~------  270 (359)
                      ...||..|+|||++.+..++.++|||||||++|||++|..++....            ...+......  .+..      
T Consensus       321 ~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l  400 (461)
T PHA03211        321 GIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRL  400 (461)
T ss_pred             ccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHH
Confidence            2458999999999998899999999999999999999876543211            0011100000  0000      


Q ss_pred             ---------ccccCCCC-------hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          271 ---------SCLEGQFS-------SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       271 ---------~~~~~~~~-------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                               ........       ...+.++.+|+.+||+.||.+|||+.|+|++
T Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        401 VSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             HHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence                     00000000       0234578999999999999999999999975

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=3.4e-42  Score=316.36  Aligned_cols=249  Identities=16%  Similarity=0.128  Sum_probs=197.6

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      +|.+++.||+|+||+||+++. .++..||+|.+....   ......+.+|+.++..++|+||+++++++...+..++|||
T Consensus         2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E   81 (331)
T cd05624           2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD   81 (331)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            578889999999999999995 467889999987521   1223457889999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC---
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~---  210 (359)
                      |+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.......   
T Consensus        82 y~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~~L~~lH~~-~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  159 (331)
T cd05624          82 YYVGGDLLTLLSK-FEDRLPEDMARFYIAEMVLAIHSIHQL-HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ  159 (331)
T ss_pred             CCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCchHHEEEcCCCCEEEEeccceeeccCCCcee
Confidence            9999999999964 245789999999999999999999999 99999999999999999999999999987654332   


Q ss_pred             --CcCCCccccCcccccC-----CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          211 --SYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       211 --~~~~t~~y~aPE~~~~-----~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                        ...||+.|+|||++.+     +.++.++||||||+++|+|++|+.||.................... .+......+.
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~-~p~~~~~~~~  238 (331)
T cd05624         160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ-FPSHITDVSE  238 (331)
T ss_pred             eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCccc-CCCccccCCH
Confidence              2458999999999875     4578899999999999999999999876543222211111100000 0111133567


Q ss_pred             HHHHHHHHhcccCCCC--CCCHHHHHHH
Q 018244          284 ELVRLASRCLQYEPRE--RPNPRSLVTA  309 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~--Rps~~~il~~  309 (359)
                      ++.+++.+|+..++.+  |+++++++++
T Consensus       239 ~~~~li~~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         239 EAKDLIQRLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             HHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence            8999999999876544  4688888764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=1.1e-41  Score=301.40  Aligned_cols=246  Identities=17%  Similarity=0.191  Sum_probs=204.8

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .|.+++.||+|+||.||++.. .++..||+|.+....  ....+.+.+|+.+++.++|+||+++++++...+..++|+||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            367788899999999999984 568899999987532  22345788999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----  210 (359)
                      +.+++|.+++.......+++.++..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++.......    
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~  159 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELAR  159 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhh
Confidence            9999999998654445689999999999999999999999 99999999999999999999999999987654432    


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ...++..|+|||++.+..++.++|+||||+++|+|++|..|+...............     .....+...+.++.+++.
T Consensus       160 ~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~  234 (256)
T cd08218         160 TCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRG-----SYPPVSSHYSYDLRNLVS  234 (256)
T ss_pred             hccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcC-----CCCCCcccCCHHHHHHHH
Confidence            345778899999999888999999999999999999999888654333222111111     111233456778999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~  309 (359)
                      +||+.+|++||++.+++.+
T Consensus       235 ~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         235 QLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             HHhhCChhhCcCHHHHhhC
Confidence            9999999999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=2.1e-41  Score=303.51  Aligned_cols=244  Identities=16%  Similarity=0.258  Sum_probs=203.8

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ..|..++.||.|+||.||+|.. .++..||+|.+..... .....+.+|+.+++.+.|+||+++++++.+....++||||
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence            3566788899999999999985 4588999999875432 3356788999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----  210 (359)
                      +++++|.+++.   ...+++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++.......    
T Consensus        84 ~~~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~-~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~  159 (277)
T cd06640          84 LGGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN  159 (277)
T ss_pred             CCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CccCcCCChhhEEEcCCCCEEEcccccceeccCCccccc
Confidence            99999999884   35689999999999999999999999 99999999999999999999999999987654322    


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ...++..|+|||.+.+..++.++|+||||+++|+|++|..|+..........     ..............+..+.+++.
T Consensus       160 ~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~  234 (277)
T cd06640         160 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF-----LIPKNNPPTLTGEFSKPFKEFID  234 (277)
T ss_pred             cccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh-----hhhcCCCCCCchhhhHHHHHHHH
Confidence            2356788999999988889999999999999999999998876543221111     11111122334567788999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~  309 (359)
                      +||+.+|++||++.+++..
T Consensus       235 ~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         235 ACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             HHcccCcccCcCHHHHHhC
Confidence            9999999999999999876

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=1e-41  Score=306.50  Aligned_cols=250  Identities=19%  Similarity=0.225  Sum_probs=196.5

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      +|.+++.||.|++|.||+|.. .++..||+|.+.....  ...+.+.+|+.+++.++||||+++++++..+...++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            467788899999999999995 4688999999875432  2245688899999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          135 MPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       135 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      +. ++|.+++.... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......    
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  158 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR-RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVY  158 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccc
Confidence            97 58888886433 35789999999999999999999999 9999999999999999999999999998755432    


Q ss_pred             CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhh--------------------
Q 018244          210 RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL--------------------  268 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~--------------------  268 (359)
                      ....+++.|+|||.+.+. .++.++||||||+++|+|+||+.||................                    
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
T cd07861         159 THEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNT  238 (285)
T ss_pred             cCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhh
Confidence            223457889999988754 47889999999999999999998886442211100000000                    


Q ss_pred             cccccc---CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          269 TDSCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       269 ~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ......   .......+.++.+++.+||..||++|||+.+++..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~  282 (285)
T cd07861         239 FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH  282 (285)
T ss_pred             ccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence            000000   00112356788999999999999999999998863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4.6e-41  Score=311.88  Aligned_cols=243  Identities=13%  Similarity=0.168  Sum_probs=190.3

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      .|.+++.||.|+||.||+|... ++..||+|.....      ....|+.+++.++|+||+++++++......++|+||+.
T Consensus        67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  140 (357)
T PHA03209         67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS  140 (357)
T ss_pred             CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC
Confidence            5888999999999999999954 5778999975532      23568999999999999999999999999999999995


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---CCcC
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYS  213 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---~~~~  213 (359)
                       ++|.+++.. ....+++..+..|+.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....   ....
T Consensus       141 -~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~  217 (357)
T PHA03209        141 -SDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQ-RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLA  217 (357)
T ss_pred             -CcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEEecCccccccccCccccccc
Confidence             588888864 455789999999999999999999999 9999999999999999999999999998754322   2346


Q ss_pred             CCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchh----HHHh--hhhhhhhc------ccccc-------
Q 018244          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIR--DRNIQTLT------DSCLE-------  274 (359)
Q Consensus       214 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~----~~~~--~~~~~~~~------~~~~~-------  274 (359)
                      ||..|+|||++.+..++.++|||||||++|||+++..++.....    ....  ...+....      .....       
T Consensus       218 gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  297 (357)
T PHA03209        218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRL  297 (357)
T ss_pred             ccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHH
Confidence            88999999999988999999999999999999987655432110    0000  00000000      00000       


Q ss_pred             ------------CC-------CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          275 ------------GQ-------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       275 ------------~~-------~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                  ..       .....+.++.+||.+||+.||++|||+.+++++
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h  351 (357)
T PHA03209        298 VRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY  351 (357)
T ss_pred             HHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence                        00       001234567789999999999999999999875

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=1.5e-41  Score=302.21  Aligned_cols=244  Identities=17%  Similarity=0.226  Sum_probs=199.7

Q ss_pred             ccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc------hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      |.+.+.||.|+||.||+|...++..+|+|.+......      ....+.+|+++++.++|+||+++++++.+.+..++++
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM   81 (265)
T ss_pred             ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence            5566778999999999999878889999998754321      1345888999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----  208 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----  208 (359)
                      ||+++++|.+++.+  ...+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++.....    
T Consensus        82 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~  158 (265)
T cd06631          82 EFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLHNN-CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH  158 (265)
T ss_pred             ecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc
Confidence            99999999999963  35689999999999999999999999 999999999999999999999999998875421    


Q ss_pred             ------CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHH
Q 018244          209 ------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       209 ------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                            .....++..|+|||.+.+..++.++||||||+++|+|++|..||............ .  .........+...+
T Consensus       159 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~  235 (265)
T cd06631         159 GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYI-G--AHRGLMPRLPDSFS  235 (265)
T ss_pred             ccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHh-h--hccCCCCCCCCCCC
Confidence                  12345788999999999888999999999999999999999888643211111000 0  00011122344567


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                      .++.+++.+||+.+|++|||+.+++.
T Consensus       236 ~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         236 AAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             HHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            78999999999999999999999885

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=2.4e-41  Score=299.14  Aligned_cols=245  Identities=16%  Similarity=0.204  Sum_probs=202.3

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .+|.+.+.||.|+||.||+|... ++..+|+|.+.....  .+.+.+|+++++.++|+||+++++++......++++||+
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~   80 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC   80 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence            35677888899999999999965 478999999876432  567899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----C
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----~  211 (359)
                      .+++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.......    .
T Consensus        81 ~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~  158 (256)
T cd06612          81 GAGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSN-KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT  158 (256)
T ss_pred             CCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEECCCCcEEEcccccchhcccCcccccc
Confidence            99999999854 346789999999999999999999999 99999999999999999999999999988654332    3


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ..++..|+|||++.+..++.++||||||+++|+|++|+.|+.............   .........+...+.++.+++.+
T Consensus       159 ~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~  235 (256)
T cd06612         159 VIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIP---NKPPPTLSDPEKWSPEFNDFVKK  235 (256)
T ss_pred             ccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhc---cCCCCCCCchhhcCHHHHHHHHH
Confidence            346789999999998889999999999999999999998876432211110000   00001111233456789999999


Q ss_pred             hcccCCCCCCCHHHHHH
Q 018244          292 CLQYEPRERPNPRSLVT  308 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~  308 (359)
                      ||+.||++|||+.+++.
T Consensus       236 ~l~~~P~~Rps~~~il~  252 (256)
T cd06612         236 CLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             HHhcChhhCcCHHHHhc
Confidence            99999999999999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=2.1e-41  Score=301.30  Aligned_cols=250  Identities=20%  Similarity=0.289  Sum_probs=202.8

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      +|++.+.+|.|+||+||+|.. .++..+|+|++..... .....+.+|+++++.++|+||+++++.+...+..++|+||+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~   81 (267)
T cd06610           2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL   81 (267)
T ss_pred             cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence            567888899999999999994 4688999999975432 24567899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----
Q 018244          136 PNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----  210 (359)
                      ++++|.+++..... ..+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.......    
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~-~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~  160 (267)
T cd06610          82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN-GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR  160 (267)
T ss_pred             CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence            99999999975332 5689999999999999999999999 99999999999999999999999999987654332    


Q ss_pred             ----CcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccC-CCChHHHHH
Q 018244          211 ----SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG-QFSSDEGTE  284 (359)
Q Consensus       211 ----~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  284 (359)
                          ...++..|+|||.+... .++.++|+||||+++|+|++|+.|+............... ....... ......+..
T Consensus       161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  239 (267)
T cd06610         161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN-DPPSLETGADYKKYSKS  239 (267)
T ss_pred             cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC-CCCCcCCccccccccHH
Confidence                23578899999998876 6889999999999999999999887654322111111111 0111111 111245688


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          285 LVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       285 l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+++.+||..||++|||+.+++.+
T Consensus       240 ~~~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         240 FRKMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhhC
Confidence            9999999999999999999999863

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=8.7e-42  Score=320.55  Aligned_cols=243  Identities=16%  Similarity=0.199  Sum_probs=195.1

Q ss_pred             cccccccCCCCCCcEEEEEEeC---CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .|.+++.||.|+||.||+|...   .+..||+|.+...     ....+|+++|+.++||||+++++++......+++||+
T Consensus        93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~  167 (392)
T PHA03207         93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK  167 (392)
T ss_pred             ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence            5889999999999999999743   3578999988653     2346799999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----  210 (359)
                      +. ++|.+++.  ....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.++|+|||++.......    
T Consensus       168 ~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~-givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~  243 (392)
T PHA03207        168 YK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGR-GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ  243 (392)
T ss_pred             cC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEcCCCCEEEccCccccccCccccccc
Confidence            96 57888884  456799999999999999999999999 99999999999999999999999999987654321    


Q ss_pred             --CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHh---hhhhhh------------------
Q 018244          211 --SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR---DRNIQT------------------  267 (359)
Q Consensus       211 --~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~---~~~~~~------------------  267 (359)
                        ...||+.|+|||++.+..++.++|||||||++|+|++|+.||.........   ......                  
T Consensus       244 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~  323 (392)
T PHA03207        244 CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCK  323 (392)
T ss_pred             ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHH
Confidence              346899999999999889999999999999999999999998654211000   000000                  


Q ss_pred             -h--ccccccCCC--C-----hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          268 -L--TDSCLEGQF--S-----SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       268 -~--~~~~~~~~~--~-----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                       +  ........+  +     ...+.++.++|.+||..||++|||+.+++.+
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        324 HFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             HHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence             0  000000000  0     1235678899999999999999999999986

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=2.9e-41  Score=306.52  Aligned_cols=251  Identities=20%  Similarity=0.299  Sum_probs=200.3

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCc----EEEEEEeCCCCCch-HHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      +++.++.||+|+||.||+|.+ .++.    .+|+|.+....... ...+.+|+.+++.++||||+++++++... ..+++
T Consensus         8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v   86 (303)
T cd05110           8 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLV   86 (303)
T ss_pred             hceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceee
Confidence            456777889999999999985 3443    57999887654322 34688999999999999999999998654 57799


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-  210 (359)
                      +||+++|+|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||++++++.+||+|||+++...... 
T Consensus        87 ~e~~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~  164 (303)
T cd05110          87 TQLMPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEER-RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK  164 (303)
T ss_pred             ehhcCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhc-CeeccccccceeeecCCCceEEccccccccccCccc
Confidence            999999999999864 344689999999999999999999999 99999999999999999999999999998654322 


Q ss_pred             -----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHH
Q 018244          211 -----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE  284 (359)
Q Consensus       211 -----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (359)
                           ...++..|+|||.+.+..++.++||||||+++|||++ |+.|+...........     .........+...+.+
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  239 (303)
T cd05110         165 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDL-----LEKGERLPQPPICTID  239 (303)
T ss_pred             ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-----HHCCCCCCCCCCCCHH
Confidence                 1234568999999998889999999999999999997 7777765432222211     1111111122345678


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          285 LVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       285 l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      +.+++.+||..+|++||++.++++.|+.+..+
T Consensus       240 ~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~  271 (303)
T cd05110         240 VYMVMVKCWMIDADSRPKFKELAAEFSRMARD  271 (303)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=3e-41  Score=310.60  Aligned_cols=253  Identities=20%  Similarity=0.302  Sum_probs=204.8

Q ss_pred             cccccccCCCCCCcEEEEEEeC--------CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcC-CCcccccccceeeeCCc
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDE  127 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~  127 (359)
                      .|.+.+.||+|+||.||+|...        .+..+|+|.+..... ...+.+.+|+++++++ +|+||+++++++...+.
T Consensus        13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~   92 (334)
T cd05100          13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP   92 (334)
T ss_pred             HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence            4678889999999999999732        123689998875432 2356788999999999 79999999999999999


Q ss_pred             ceEEEecCCCCCHhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV  193 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~  193 (359)
                      .++++||+++|+|.+++....              ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++
T Consensus        93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-givH~dlkp~Nill~~~~  171 (334)
T cd05100          93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDN  171 (334)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC-CeeccccccceEEEcCCC
Confidence            999999999999999986422              23578899999999999999999999 999999999999999999


Q ss_pred             CeEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhh
Q 018244          194 NPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQ  266 (359)
Q Consensus       194 ~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~  266 (359)
                      .+||+|||+++......      ...++..|+|||.+.+..++.++||||||+++|+|++ |..|+..............
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  251 (334)
T cd05100         172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKE  251 (334)
T ss_pred             cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            99999999987654322      1223467999999998889999999999999999998 7777765543333222111


Q ss_pred             hhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                           ......+...+..+.+++.+||+.+|++|||+.++++.|+.+...
T Consensus       252 -----~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~  296 (334)
T cd05100         252 -----GHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV  296 (334)
T ss_pred             -----CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence                 111223345567899999999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-41  Score=308.66  Aligned_cols=246  Identities=18%  Similarity=0.174  Sum_probs=201.8

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc---hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      +|++.+.||.|++|.||+|... ++..+|+|.+......   ..+.+.+|+++++.++|+||+++++.+......++|||
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   81 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD   81 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence            5677888899999999999954 5889999999865433   34568889999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |+.+++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......    
T Consensus        82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~  160 (316)
T cd05574          82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL-GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV  160 (316)
T ss_pred             ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC-CeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence            99999999998754556799999999999999999999999 9999999999999999999999999987653221    


Q ss_pred             -----------------------------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHH
Q 018244          210 -----------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI  260 (359)
Q Consensus       210 -----------------------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~  260 (359)
                                                   ....|+..|+|||++.+..++.++||||||+++|+|++|..||........
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~  240 (316)
T cd05574         161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET  240 (316)
T ss_pred             ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence                                         123567889999999988899999999999999999999999865543222


Q ss_pred             hhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCC----HHHHHH
Q 018244          261 RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN----PRSLVT  308 (359)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~il~  308 (359)
                      ....    .............+..+.+++.+||..||++|||    ++++++
T Consensus       241 ~~~~----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         241 FSNI----LKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             HHHH----hcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence            1111    1111111111225788999999999999999999    666665

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=4.6e-41  Score=299.80  Aligned_cols=246  Identities=18%  Similarity=0.225  Sum_probs=186.4

Q ss_pred             cCCCCCCcEEEEEEeCCC---cEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCC
Q 018244           64 EHGEKAPNVVYKGKLENQ---FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs  139 (359)
                      +||+|+||.||+|...++   ..+++|.+..... ...+.+.+|+.+++.++||||+++++.+......++||||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            579999999999974332   3566777665432 335678999999999999999999999999999999999999999


Q ss_pred             HhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC------CCC
Q 018244          140 LAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------GRS  211 (359)
Q Consensus       140 L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~------~~~  211 (359)
                      |.+++....  ....++..+..++.||+.||+|||+. +++|+||||+|||++.++.++|+|||++.....      ...
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  160 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH-NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD  160 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CeeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence            999986432  23467778899999999999999999 999999999999999999999999999764221      223


Q ss_pred             cCCCccccCcccccC-------CCCCCccchhhHHHHHHHHHhCCC-CCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          212 YSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLSGKH-IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~-------~~~~~~~Di~slG~il~elltg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                      ..++..|+|||++..       ..++.++||||||+++|||+++.. |+......................+......+.
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (268)
T cd05086         161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSE  240 (268)
T ss_pred             CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcH
Confidence            456789999998753       235789999999999999998644 443322111111111111111111222334567


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~  311 (359)
                      .+.+++..|| .+|++|||++++++.|.
T Consensus       241 ~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         241 RWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             HHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            8899999999 67999999999988763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=2.8e-41  Score=298.71  Aligned_cols=246  Identities=18%  Similarity=0.207  Sum_probs=203.5

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .|++++.||.|++|.||+|.. .++..+|+|.+.....  .....+.+|+++++.++|||++++++.+...+..++||||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            367788889999999999984 5688999999876432  2355788999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC-CCeEEeccCCcccCCCCC---
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDGR---  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~-~~~kl~DFg~a~~~~~~~---  210 (359)
                      +++++|.+++.......+++..+..++.|++.||.|||++ +++|+||+|+||+++++ +.++|+|||++.......   
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~  159 (256)
T cd08220          81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK-LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY  159 (256)
T ss_pred             CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc
Confidence            9999999999764455689999999999999999999999 99999999999999855 458999999988665432   


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ...++..|+|||.+.+..++.++||||||+++|+|++|+.|+...............     .....+...+.++.+++.
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~  234 (256)
T cd08220         160 TVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSG-----TFAPISDRYSPDLRQLIL  234 (256)
T ss_pred             ccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhc-----CCCCCCCCcCHHHHHHHH
Confidence            345678999999999888899999999999999999999888655433222221111     111233446778999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~  309 (359)
                      +||+.||++|||+.+++++
T Consensus       235 ~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         235 SMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             HHccCChhhCCCHHHHhhC
Confidence            9999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=7.6e-42  Score=314.23  Aligned_cols=249  Identities=17%  Similarity=0.137  Sum_probs=197.6

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      +|.+++.||+|+||+||++... ++..+|+|.+....   ......+.+|+.++..++|+||+++++++.+.+..++|||
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD   81 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence            5778889999999999999954 57789999986421   1223457889999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |+++|+|.+++.+ ....+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||++......    
T Consensus        82 y~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~-~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~  159 (332)
T cd05623          82 YYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQL-HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ  159 (332)
T ss_pred             ccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence            9999999999964 345689999999999999999999999 9999999999999999999999999998754322    


Q ss_pred             -CCcCCCccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          210 -RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~-----~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                       ....||+.|+|||++.     ...++.++|||||||++|||++|+.||................... .........+.
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~-~~p~~~~~~s~  238 (332)
T cd05623         160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF-QFPAQVTDVSE  238 (332)
T ss_pred             ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccc-cCCCccccCCH
Confidence             1346899999999986     3458889999999999999999999987654332222211110000 01111234578


Q ss_pred             HHHHHHHHhcccCCCC--CCCHHHHHHH
Q 018244          284 ELVRLASRCLQYEPRE--RPNPRSLVTA  309 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~--Rps~~~il~~  309 (359)
                      ++.+|+.+|+..++++  |+++.+++++
T Consensus       239 ~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         239 DAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             HHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            8999999999765544  6899998876

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=1.3e-41  Score=307.07  Aligned_cols=241  Identities=17%  Similarity=0.239  Sum_probs=198.3

Q ss_pred             cccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCH
Q 018244           62 VSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL  140 (359)
                      ...||.|+||.||++.. .++..||||.+........+.+.+|+.+++.++|+||+++++.+..++..++||||+++++|
T Consensus        27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L  106 (292)
T cd06658          27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL  106 (292)
T ss_pred             hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence            34579999999999985 46889999999766555566789999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CCcCCCc
Q 018244          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNL  216 (359)
Q Consensus       141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~~~~t~  216 (359)
                      .+++.   ...+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||++......    ....++.
T Consensus       107 ~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~  182 (292)
T cd06658         107 TDIVT---HTRMNEEQIATVCLSVLRALSYLHNQ-GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTP  182 (292)
T ss_pred             HHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCc
Confidence            99884   34689999999999999999999999 9999999999999999999999999998754322    2345788


Q ss_pred             cccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccC
Q 018244          217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE  296 (359)
Q Consensus       217 ~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  296 (359)
                      .|+|||.+.+..++.++||||||+++|||++|..|+........... ..........  .....+..+.+++.+||..|
T Consensus       183 ~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~  259 (292)
T cd06658         183 YWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRR-IRDNLPPRVK--DSHKVSSVLRGFLDLMLVRE  259 (292)
T ss_pred             cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhcCCCccc--cccccCHHHHHHHHHHccCC
Confidence            99999999888899999999999999999999998865432211111 1111111111  11235668999999999999


Q ss_pred             CCCCCCHHHHHHH
Q 018244          297 PRERPNPRSLVTA  309 (359)
Q Consensus       297 p~~Rps~~~il~~  309 (359)
                      |++|||++++++.
T Consensus       260 P~~Rpt~~~il~~  272 (292)
T cd06658         260 PSQRATAQELLQH  272 (292)
T ss_pred             hhHCcCHHHHhhC
Confidence            9999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=3.9e-41  Score=301.26  Aligned_cols=250  Identities=20%  Similarity=0.307  Sum_probs=201.1

Q ss_pred             CcccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      ..|.++..||.|+||.||+|...      +...+|+|.+...... ..+.+.+|++++++++|+||+++++++.+.+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            45678888999999999999853      2467999998765433 3567899999999999999999999999989999


Q ss_pred             EEEecCCCCCHhhhhhcCCC-------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCC
Q 018244          130 LVAEYMPNDTLAKHLFHWET-------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~  202 (359)
                      +||||+++|+|.+++.....       ..+++..+..++.|++.||+|||++ +++|+||||+||+++.++.++++|||+
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dlkp~Nili~~~~~~~l~~~~~  163 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA-RFVHRDLAARNCLVSSQREVKVSLLSL  163 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc-CcccCcCccceEEEeCCCcEEEccccc
Confidence            99999999999999974331       2689999999999999999999999 999999999999999999999999999


Q ss_pred             cccCCCC-----CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCC
Q 018244          203 MKNSRDG-----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQ  276 (359)
Q Consensus       203 a~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  276 (359)
                      +......     ....++..|+|||.+.+..++.++||||||+++|+|++ |..||.............    .......
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~----~~~~~~~  239 (275)
T cd05046         164 SKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQ----AGKLELP  239 (275)
T ss_pred             ccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHH----cCCcCCC
Confidence            8654322     22344667999999988888999999999999999999 566664332221111111    1111111


Q ss_pred             CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 018244          277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       277 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~  311 (359)
                      .+...+..+.+++.+||+.+|++|||+.++++.|.
T Consensus       240 ~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         240 VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            23446678999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=2.2e-41  Score=309.26  Aligned_cols=243  Identities=15%  Similarity=0.221  Sum_probs=183.7

Q ss_pred             ccCCCCCCcEEEEEEeC---CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeee--CCcceEEEecCCC
Q 018244           63 SEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVAEYMPN  137 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~  137 (359)
                      .+||+|+||+||+|...   ++..+|+|.+.....  ...+.+|+++|+.++||||+++++++..  ....+++|||+.+
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH   84 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence            46799999999999854   467899999975432  3457889999999999999999998854  3568899999865


Q ss_pred             CCHhhhhhcC-------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee----CCCCCeEEeccCCcccC
Q 018244          138 DTLAKHLFHW-------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       138 gsL~~~l~~~-------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll----~~~~~~kl~DFg~a~~~  206 (359)
                       +|.+++...       ....+++..+..++.||+.||.|||++ +++||||||+|||+    +.++.+||+|||+++..
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~  162 (317)
T cd07868          85 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  162 (317)
T ss_pred             -CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence             788877531       123589999999999999999999999 99999999999999    45678999999999765


Q ss_pred             CCC-------CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHH---------hhhhhhh--
Q 018244          207 RDG-------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI---------RDRNIQT--  267 (359)
Q Consensus       207 ~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~---------~~~~~~~--  267 (359)
                      ...       ....+|+.|+|||++.+. .++.++||||+||++|+|++|+.||.....+..         .......  
T Consensus       163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (317)
T cd07868         163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG  242 (317)
T ss_pred             CCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcC
Confidence            432       234678899999999864 588999999999999999999988853221100         0000000  


Q ss_pred             ------------------hccccccCC------------CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          268 ------------------LTDSCLEGQ------------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       268 ------------------~~~~~~~~~------------~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                        .........            .....+..+.+|+.+||+.||++|||+++++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h  314 (317)
T cd07868         243 FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD  314 (317)
T ss_pred             CCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence                              000000000            000123468899999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8e-43  Score=310.06  Aligned_cols=268  Identities=19%  Similarity=0.226  Sum_probs=217.6

Q ss_pred             cCCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCc---hHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           54 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        54 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      +.|..|+++   |+|+||.||-+. ..+|+.+|.|.+.+....   .....++|-++|.+++.+.||.+-..|.+++.++
T Consensus       185 n~F~~~Rvl---GkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC  261 (591)
T KOG0986|consen  185 NTFRVYRVL---GKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC  261 (591)
T ss_pred             cceeeeEEE---ecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence            457777777   999999999998 457999999998754322   2334688999999999999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      ||+..|.||+|.-+|.+.....+++..+..++.+|+.||.+||+. +||+||+||+|||+|+.|+++|+|+|+|.....+
T Consensus       262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~-~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g  340 (591)
T KOG0986|consen  262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR-RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG  340 (591)
T ss_pred             EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc-ceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence            999999999999999876677899999999999999999999999 9999999999999999999999999999987766


Q ss_pred             C---CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          210 R---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       210 ~---~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                      .   ..+||.+|||||++.++.|+.+.|+|||||++|||+.|+.||.......-.+...+....  ....++...+++++
T Consensus       341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~--~~~ey~~kFS~eak  418 (591)
T KOG0986|consen  341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE--DPEEYSDKFSEEAK  418 (591)
T ss_pred             CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc--chhhcccccCHHHH
Confidence            5   347899999999999999999999999999999999999998754322111111111111  12345677899999


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHhhhcccCCccccchhHHHHHHhh
Q 018244          287 RLASRCLQYEPRERPNPRSLVTALVTLQKDTEVSCFLFSSQFTYALLRL  335 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~~~~~~~~~~~~~~~~  335 (359)
                      +|....|++||++|.....-        ...++...+.+...+|..+..
T Consensus       419 slc~~LL~Kdp~~RLGcrg~--------ga~evk~HpfFk~lnw~rlea  459 (591)
T KOG0986|consen  419 SLCEGLLTKDPEKRLGCRGE--------GAQEVKEHPFFKDLNWRRLEA  459 (591)
T ss_pred             HHHHHHHccCHHHhccCCCc--------CcchhhhCcccccCCHhHHhc
Confidence            99999999999999865521        233444555555555555444

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=2.2e-41  Score=306.44  Aligned_cols=242  Identities=17%  Similarity=0.221  Sum_probs=199.0

Q ss_pred             ccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCC
Q 018244           61 IVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs  139 (359)
                      ....||.|+||.||+|.. .++..||+|.+........+.+.+|+.++..+.||||+++++++..++..++|+||+++++
T Consensus        25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~  104 (297)
T cd06659          25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA  104 (297)
T ss_pred             hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence            344679999999999985 4688999999976554556678899999999999999999999999999999999999999


Q ss_pred             HhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CCcCCC
Q 018244          140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTN  215 (359)
Q Consensus       140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~~~~t  215 (359)
                      |.+++.   ...+++..++.++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++......    ....++
T Consensus       105 L~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~  180 (297)
T cd06659         105 LTDIVS---QTRLNEEQIATVCESVLQALCYLHSQ-GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGT  180 (297)
T ss_pred             HHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecC
Confidence            999873   35689999999999999999999999 9999999999999999999999999998754332    234578


Q ss_pred             ccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhccc
Q 018244          216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY  295 (359)
Q Consensus       216 ~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  295 (359)
                      ..|+|||++.+..++.++||||||+++|+|++|..||............ ......  ........+.++.+++.+||+.
T Consensus       181 ~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~l~~~i~~~l~~  257 (297)
T cd06659         181 PYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL-RDSPPP--KLKNAHKISPVLRDFLERMLTR  257 (297)
T ss_pred             ccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-hccCCC--CccccCCCCHHHHHHHHHHhcC
Confidence            8999999999888999999999999999999999887644221111111 000000  1111234567899999999999


Q ss_pred             CCCCCCCHHHHHHH
Q 018244          296 EPRERPNPRSLVTA  309 (359)
Q Consensus       296 dp~~Rps~~~il~~  309 (359)
                      +|++||++.+++++
T Consensus       258 ~P~~Rps~~~ll~~  271 (297)
T cd06659         258 EPQERATAQELLDH  271 (297)
T ss_pred             CcccCcCHHHHhhC
Confidence            99999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=5.6e-41  Score=305.18  Aligned_cols=248  Identities=19%  Similarity=0.214  Sum_probs=201.7

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      ...|.+++.||.|+||+||+|.. .++..||+|.+.....   .....+.+|+.+++.++||||+++.+++...+..++|
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv   93 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV   93 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence            34577888899999999999985 4688999999865432   2235688999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCC
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS  211 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~  211 (359)
                      +||+.+ +|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++........
T Consensus        94 ~e~~~g-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~-~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~  170 (307)
T cd06607          94 MEYCLG-SASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSH-ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANS  170 (307)
T ss_pred             HHhhCC-CHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEECCCCCEEEeecCcceecCCCCC
Confidence            999974 77777653 345689999999999999999999999 999999999999999999999999999987776666


Q ss_pred             cCCCccccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       212 ~~~t~~y~aPE~~~---~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                      ..++..|+|||++.   ...++.++||||||+++|+|+||..|+............    .............+..+.++
T Consensus       171 ~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l  246 (307)
T cd06607         171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI----AQNDSPTLSSNDWSDYFRNF  246 (307)
T ss_pred             ccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHH----hcCCCCCCCchhhCHHHHHH
Confidence            77888999999874   355888999999999999999999887654221111110    00001111123466789999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVTAL  310 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~L  310 (359)
                      +.+||..||++|||+.+++.+.
T Consensus       247 i~~~l~~~p~~Rp~~~~il~~~  268 (307)
T cd06607         247 VDSCLQKIPQDRPSSEELLKHR  268 (307)
T ss_pred             HHHHhcCChhhCcCHHHHhcCh
Confidence            9999999999999999998753

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=2e-41  Score=325.07  Aligned_cols=249  Identities=18%  Similarity=0.158  Sum_probs=187.7

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCC------cccccccceeeeC-Ccc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN------RRLANLLGCCCEG-DER  128 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~~~~~~~~~-~~~  128 (359)
                      ..|++++.||+|+||+||+|.. ..+..||||++.... ........|++++..++|      .+++++++++... ...
T Consensus       129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~  207 (467)
T PTZ00284        129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM  207 (467)
T ss_pred             CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence            4588888999999999999985 467889999996432 123345567777776654      4588888888764 468


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC---------------
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---------------  193 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~---------------  193 (359)
                      ++|||++ +++|.+++.  ....+++..+..|+.||+.||.|||++.+|+||||||+|||++.++               
T Consensus       208 ~iv~~~~-g~~l~~~l~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~  284 (467)
T PTZ00284        208 CIVMPKY-GPCLLDWIM--KHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDP  284 (467)
T ss_pred             EEEEecc-CCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCC
Confidence            8999988 668988886  3467999999999999999999999733999999999999998765               


Q ss_pred             -CeEEeccCCcccCCC-CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh-----
Q 018244          194 -NPRLSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-----  266 (359)
Q Consensus       194 -~~kl~DFg~a~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~-----  266 (359)
                       .+||+|||.+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..............     
T Consensus       285 ~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~  364 (467)
T PTZ00284        285 CRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRL  364 (467)
T ss_pred             ceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Confidence             499999998765433 2355789999999999999999999999999999999999999865432111000000     


Q ss_pred             --------------hhccc--cccCCC---------------ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          267 --------------TLTDS--CLEGQF---------------SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       267 --------------~~~~~--~~~~~~---------------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                    .+...  .+....               .......+.+||.+||+.||++|||++|++++
T Consensus       365 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H  438 (467)
T PTZ00284        365 PSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH  438 (467)
T ss_pred             CHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence                          00000  000000               00124568899999999999999999999974

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=3.2e-41  Score=303.31  Aligned_cols=249  Identities=20%  Similarity=0.252  Sum_probs=197.5

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .|++++.||+|++|.||+|... +++.||+|++.....  ...+.+.+|+++++.++|+|++++++++......++||||
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~   81 (286)
T cd07847           2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY   81 (286)
T ss_pred             ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence            5778888999999999999964 688999999865432  2234578999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----  210 (359)
                      +++++|..++.  ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......    
T Consensus        82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  158 (286)
T cd07847          82 CDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKH-NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYT  158 (286)
T ss_pred             cCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCChhhEEEcCCCcEEECccccceecCCCccccc
Confidence            99988877764  344689999999999999999999999 99999999999999999999999999988765433    


Q ss_pred             CcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhh---hhhh-----------------c
Q 018244          211 SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN---IQTL-----------------T  269 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~---~~~~-----------------~  269 (359)
                      ...++..|+|||.+.+ ..++.++||||||+++|+|++|..||............   ....                 .
T Consensus       159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T cd07847         159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS  238 (286)
T ss_pred             CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence            3456788999999876 45788999999999999999999888654321111000   0000                 0


Q ss_pred             cccccCCC-----ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          270 DSCLEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       270 ~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+......     ....+..+.+|+.+||+.||++|||+.+++.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~  283 (286)
T cd07847         239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH  283 (286)
T ss_pred             CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence            00000000     01246789999999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.2e-42  Score=311.53  Aligned_cols=247  Identities=17%  Similarity=0.192  Sum_probs=201.4

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEEE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~  132 (359)
                      -..|.++++||.||.+.||++...+...+|+|++.....  ....-|.+|+..|.+|+ |.+||++++|-..++.+|+||
T Consensus       360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm  439 (677)
T KOG0596|consen  360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM  439 (677)
T ss_pred             cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence            357899999999999999999987777899888765432  23566999999999996 999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC--
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--  210 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~--  210 (359)
                      ||-+. +|...|.........| .+..+..||++|+.++|.. ||||.||||.|+|+- .|.+||+|||+|.....++  
T Consensus       440 E~Gd~-DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~-gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTs  515 (677)
T KOG0596|consen  440 ECGDI-DLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQH-GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTS  515 (677)
T ss_pred             ecccc-cHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHh-ceeecCCCcccEEEE-eeeEEeeeechhcccCccccc
Confidence            99755 8999997643333334 8889999999999999999 999999999999997 6799999999999877664  


Q ss_pred             ----CcCCCccccCcccccCC-----------CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccC
Q 018244          211 ----SYSTNLAFTPPEYLRTG-----------RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG  275 (359)
Q Consensus       211 ----~~~~t~~y~aPE~~~~~-----------~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  275 (359)
                          ..+||+.||+||.+...           +.+.++||||||||||+|+.|+.||..-..   ....+..+.++...-
T Consensus       516 I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n---~~aKl~aI~~P~~~I  592 (677)
T KOG0596|consen  516 IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN---QIAKLHAITDPNHEI  592 (677)
T ss_pred             eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH---HHHHHHhhcCCCccc
Confidence                45799999999988632           266899999999999999999988764322   123445555554433


Q ss_pred             CCChHH-HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          276 QFSSDE-GTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       276 ~~~~~~-~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .++..- ..++.++++.||+.||++|||+.++|++
T Consensus       593 efp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  593 EFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             cccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence            333322 2339999999999999999999999975

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=4e-41  Score=300.13  Aligned_cols=242  Identities=22%  Similarity=0.348  Sum_probs=196.2

Q ss_pred             cCCCCCCcEEEEEEeCC-------CcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           64 EHGEKAPNVVYKGKLEN-------QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .||+|+||.||+|+..+       +..+|+|.+..... .....+.+|+++++.++||||+++++++......++||||+
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM   81 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence            46999999999998542       25799998865432 33567889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC-----CeEEeccCCccc
Q 018244          136 PNDTLAKHLFHWE-----TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-----NPRLSCFGLMKN  205 (359)
Q Consensus       136 ~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~-----~~kl~DFg~a~~  205 (359)
                      ++++|.+++....     ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++     .++|+|||++..
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~  160 (269)
T cd05044          82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM-HFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD  160 (269)
T ss_pred             CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC-CcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence            9999999996432     23478899999999999999999999 999999999999999877     899999999875


Q ss_pred             CCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCC
Q 018244          206 SRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFS  278 (359)
Q Consensus       206 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (359)
                      .....      ...++..|+|||.+.++.++.++||||||+++|+|++ |..||...........     .........+
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~-----~~~~~~~~~~  235 (269)
T cd05044         161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQH-----VTAGGRLQKP  235 (269)
T ss_pred             cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHH-----HhcCCccCCc
Confidence            43221      2234578999999998899999999999999999998 8887765432221111     1111122234


Q ss_pred             hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 018244          279 SDEGTELVRLASRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~  311 (359)
                      ...+..+.+++.+||..+|++|||+.++++.|+
T Consensus       236 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         236 ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            456788999999999999999999999999876

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=3.8e-41  Score=300.79  Aligned_cols=248  Identities=19%  Similarity=0.213  Sum_probs=197.1

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc----------hHHHHHHHHHHHhcCCCcccccccceeeeCCc
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP----------DARQFLEEARAVGQLRNRRLANLLGCCCEGDE  127 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  127 (359)
                      |.+.+.||.|++|.||+|.. .++..+|+|.+......          ..+.+.+|+.+++.++|+|++++++++...+.
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   82 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY   82 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence            55667789999999999984 46889999988642111          12457789999999999999999999999999


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      .++||||+++++|.+++..  ...+++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++....
T Consensus        83 ~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~  159 (272)
T cd06629          83 LSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSK-GILHRDLKADNLLVDADGICKISDFGISKKSD  159 (272)
T ss_pred             eEEEEecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhC-CeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence            9999999999999999864  35789999999999999999999999 99999999999999999999999999987654


Q ss_pred             CC------CCcCCCccccCcccccCCC--CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCCh
Q 018244          208 DG------RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS  279 (359)
Q Consensus       208 ~~------~~~~~t~~y~aPE~~~~~~--~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (359)
                      ..      ....++..|+|||.+....  ++.++|+||||+++|++++|..|+...........................
T Consensus       160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (272)
T cd06629         160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSM  239 (272)
T ss_pred             ccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccc
Confidence            32      1235678999999987654  788999999999999999999887543221111110000011111111223


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          280 DEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       280 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ..+.++.+++.+||..+|++|||+.+++++
T Consensus       240 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         240 NLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             cCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            456789999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=4.5e-41  Score=305.54  Aligned_cols=249  Identities=17%  Similarity=0.134  Sum_probs=201.3

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      +|.+++.||+|+||.||++.. ..+..||+|.+.....   .....+.+|+++++.++||||+++++.+..++..++|||
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME   81 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence            567788899999999999995 4578999999876532   224567889999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |+++++|.+++..  ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||+++.....    
T Consensus        82 ~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~  158 (305)
T cd05609          82 YVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNY-GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN  158 (305)
T ss_pred             cCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence            9999999999963  35689999999999999999999999 9999999999999999999999999988642110    


Q ss_pred             ---------------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccccc
Q 018244          210 ---------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE  274 (359)
Q Consensus       210 ---------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  274 (359)
                                     ....++..|+|||.+.+..++.++|+||||+++|+|++|..||..................   .
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~---~  235 (305)
T cd05609         159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE---W  235 (305)
T ss_pred             ccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC---C
Confidence                           1234577899999998888999999999999999999999988765433322222111110   0


Q ss_pred             CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 018244          275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT  312 (359)
Q Consensus       275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~  312 (359)
                      .......+.++.+++.+||+.||++||++.++.+.|+.
T Consensus       236 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         236 PEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             CCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence            11112456789999999999999999997666666554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=7.6e-41  Score=296.06  Aligned_cols=245  Identities=28%  Similarity=0.432  Sum_probs=199.9

Q ss_pred             cccccCCCCCCcEEEEEEeCC-----CcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           60 NIVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        60 ~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      .+.+.||.|+||.||++...+     +..||+|.+...... ..+.+.+|+..+..++|+||+++++++.+.+..+++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            356678999999999999643     378999999766543 46678999999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCC--
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS--  211 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~--  211 (359)
                      |+++++|.+++.......+++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||++........  
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~-~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~  160 (258)
T smart00219       82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK-NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK  160 (258)
T ss_pred             ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC-CeeecccccceEEEccCCeEEEcccCCceecccccccc
Confidence            99999999999653333389999999999999999999999 999999999999999999999999999876554321  


Q ss_pred             ---cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          212 ---YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       212 ---~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                         ..++..|+|||.+.+..++.++||||+|+++|+|++ |..|+...............     .....+...+.++.+
T Consensus       161 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  235 (258)
T smart00219      161 KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKG-----YRLPKPENCPPEIYK  235 (258)
T ss_pred             cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-----CCCCCCCcCCHHHHH
Confidence               225678999999988889999999999999999998 66666543322222111111     111223346778999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVTAL  310 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~L  310 (359)
                      ++.+||..||++|||+.++++.|
T Consensus       236 ~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      236 LMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHHCcCChhhCcCHHHHHhhC
Confidence            99999999999999999998754

Phosphotransferases. Tyrosine-specific kinase subfamily.

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=2.4e-41  Score=336.64  Aligned_cols=249  Identities=17%  Similarity=0.207  Sum_probs=196.8

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeC--Ccce
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL  129 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~  129 (359)
                      .+..|.+++.||.|+||+||+|.. ..+..||+|.+.....  .....+..|+.+|+.|+|||||+++++|...  ..+|
T Consensus        11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly   90 (1021)
T PTZ00266         11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY   90 (1021)
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence            346789999999999999999994 4577899999875432  2345688999999999999999999988653  5689


Q ss_pred             EEEecCCCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcC------CCcccccCCCCCeeeCC----------
Q 018244          130 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSK------ERALYHDLNAYRIVFDD----------  191 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~------~~ivH~Dikp~NIll~~----------  191 (359)
                      |||||+++|+|.++|...  ....+++..++.|+.||+.||.|||+.      .+|+|+||||+||||+.          
T Consensus        91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~  170 (1021)
T PTZ00266         91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA  170 (1021)
T ss_pred             EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence            999999999999998642  235799999999999999999999984      15999999999999964          


Q ss_pred             -------CCCeEEeccCCcccCCCC---CCcCCCccccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCCCcchhHH
Q 018244          192 -------DVNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL  259 (359)
Q Consensus       192 -------~~~~kl~DFg~a~~~~~~---~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~elltg~~p~~~~~~~~  259 (359)
                             .+.+||+|||++......   ....+|+.|+|||++.+  ..++.++|||||||+||+|+||..||.......
T Consensus       171 ~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~  250 (1021)
T PTZ00266        171 QANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFS  250 (1021)
T ss_pred             cccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHH
Confidence                   345899999999865433   34468999999999864  348899999999999999999999986432111


Q ss_pred             HhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          260 IRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                      .........  +   .......+.++.+||..||..+|++|||+.+++.
T Consensus       251 qli~~lk~~--p---~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        251 QLISELKRG--P---DLPIKGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             HHHHHHhcC--C---CCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            110111100  0   0111234678999999999999999999999985

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=4.8e-41  Score=302.20  Aligned_cols=249  Identities=21%  Similarity=0.268  Sum_probs=198.7

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      +|.+.+.||.|++|.||+|.. .++..||+|.+.....  .....+.+|+.+++.++|+||+++++++..+...++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            367888899999999999995 4688999999986542  2345788999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----  210 (359)
                      + +++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......    
T Consensus        81 ~-~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~  157 (286)
T cd07832          81 M-PSDLSEVLRD-EERPLPEAQVKSYMRMLLKGVAYMHAN-GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLY  157 (286)
T ss_pred             c-CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcc
Confidence            9 9999999864 346799999999999999999999999 99999999999999999999999999988665432    


Q ss_pred             -CcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhc-------------------
Q 018244          211 -SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT-------------------  269 (359)
Q Consensus       211 -~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~-------------------  269 (359)
                       ...++..|+|||.+.+.. ++.++||||+|+++|+|++|..++.................                   
T Consensus       158 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T cd07832         158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKI  237 (286)
T ss_pred             ccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcc
Confidence             345788999999987544 68899999999999999999766654321111100000000                   


Q ss_pred             -ccccc----CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          270 -DSCLE----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       270 -~~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                       .....    .......+..+.+++.+||+.||++|||+++++.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         238 TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence             00000    00112345889999999999999999999999864

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=1.9e-41  Score=304.74  Aligned_cols=248  Identities=18%  Similarity=0.203  Sum_probs=194.3

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      |.+++.||.|+||.||+|.. .+|..+|+|.+......  ....+.+|+++++.++|+||+++++++.+....++|+||+
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC   81 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence            66778899999999999995 46889999998754221  2345778999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----C
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----~  211 (359)
                      .+ +|.+++.. ....+++..++.++.||+.||.|||+. +++|+||||+||+++.++.++|+|||++.......    .
T Consensus        82 ~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  158 (284)
T cd07839          82 DQ-DLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSH-NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSA  158 (284)
T ss_pred             CC-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCC
Confidence            75 78887754 345689999999999999999999999 99999999999999999999999999987654322    2


Q ss_pred             cCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcch-hHHHhhhhhh--------------hhccccccC
Q 018244          212 YSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNIQ--------------TLTDSCLEG  275 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~-~~~~~~~~~~--------------~~~~~~~~~  275 (359)
                      ..++..|+|||.+.+.. ++.++||||||+++|+|+||+.|+.... ..........              .........
T Consensus       159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07839         159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYP  238 (284)
T ss_pred             CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccC
Confidence            34578999999987654 7889999999999999999998754321 1111000000              000000000


Q ss_pred             ---------CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          276 ---------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       276 ---------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                               ......+.++.+++.+||+.||.+|||+++++.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h  281 (284)
T cd07839         239 MYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH  281 (284)
T ss_pred             CCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence                     0112356789999999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=4.9e-41  Score=303.09  Aligned_cols=243  Identities=19%  Similarity=0.235  Sum_probs=202.2

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      .|.+++.||.|++|.||++.. .+++.+|+|.+.....   ...+.+.+|+++++.++||||+++++++......++|||
T Consensus         2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (290)
T cd05580           2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME   81 (290)
T ss_pred             ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence            577888899999999999985 4688999999875422   234568899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-CCc
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY  212 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-~~~  212 (359)
                      |+++++|.+++..  ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++...... ...
T Consensus        82 ~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~-~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~  158 (290)
T cd05580          82 YVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSL-DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTL  158 (290)
T ss_pred             cCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCC
Confidence            9999999999863  46789999999999999999999999 9999999999999999999999999998876544 234


Q ss_pred             CCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHh
Q 018244          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC  292 (359)
Q Consensus       213 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  292 (359)
                      .+++.|+|||.+.+...+.++||||||+++|+|++|..|+.............    .  .....+...+..+.+++.+|
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~----~--~~~~~~~~~~~~l~~li~~~  232 (290)
T cd05580         159 CGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKIL----E--GKVRFPSFFSPDAKDLIRNL  232 (290)
T ss_pred             CCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh----c--CCccCCccCCHHHHHHHHHH
Confidence            57889999999988888999999999999999999998886554222211111    1  11123444577899999999


Q ss_pred             cccCCCCCC-----CHHHHHHH
Q 018244          293 LQYEPRERP-----NPRSLVTA  309 (359)
Q Consensus       293 l~~dp~~Rp-----s~~~il~~  309 (359)
                      |..||.+|+     ++++++++
T Consensus       233 l~~~p~~R~~~~~~~~~~l~~~  254 (290)
T cd05580         233 LQVDLTKRLGNLKNGVNDIKNH  254 (290)
T ss_pred             ccCCHHHccCcccCCHHHHHcC
Confidence            999999998     67776653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.9e-42  Score=313.43  Aligned_cols=249  Identities=21%  Similarity=0.342  Sum_probs=216.5

Q ss_pred             cccccCCCCCCcEEEEEEeCC-CcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCC
Q 018244           60 NIVSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        60 ~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      .+..+||-|-||.||.|.|+. ...||||.++.+.. ..++|+.|..+|+.++|||+|+++|+|.....+|||+|||..|
T Consensus       270 tMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yG  348 (1157)
T KOG4278|consen  270 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYG  348 (1157)
T ss_pred             eeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCc
Confidence            345678999999999999764 66799999987653 4788999999999999999999999999999999999999999


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCC--cCC--
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS--YST--  214 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~--~~~--  214 (359)
                      +|.+||++.....++.-.++.++.||..|+.||..+ ++|||||...|.|+.++..||++|||++++...+.-  ..|  
T Consensus       349 NLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk-nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAK  427 (1157)
T KOG4278|consen  349 NLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAK  427 (1157)
T ss_pred             cHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh-hhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCcc
Confidence            999999988888889899999999999999999999 999999999999999999999999999998766542  233  


Q ss_pred             -CccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHh
Q 018244          215 -NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC  292 (359)
Q Consensus       215 -t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  292 (359)
                       .+.|+|||.+..+.++.++|||+|||+|||+.| |..|+++-....     ...++....+-..+..+++.+.+||.+|
T Consensus       428 FPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSq-----VY~LLEkgyRM~~PeGCPpkVYeLMraC  502 (1157)
T KOG4278|consen  428 FPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----VYGLLEKGYRMDGPEGCPPKVYELMRAC  502 (1157)
T ss_pred             CcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHH-----HHHHHhccccccCCCCCCHHHHHHHHHH
Confidence             467999999999999999999999999999987 556666653332     3344444455556778889999999999


Q ss_pred             cccCCCCCCCHHHHHHHHHHhhh
Q 018244          293 LQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       293 l~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      |+..|.+||++.|+.+.++.+..
T Consensus       503 W~WsPsDRPsFaeiHqafEtmf~  525 (1157)
T KOG4278|consen  503 WNWSPSDRPSFAEIHQAFETMFS  525 (1157)
T ss_pred             hcCCcccCccHHHHHHHHHHHhc
Confidence            99999999999999999998754

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=5.1e-41  Score=301.63  Aligned_cols=246  Identities=14%  Similarity=0.203  Sum_probs=196.7

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-CCcccccccceeee------CCcc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE------GDER  128 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~------~~~~  128 (359)
                      ..|.+.+.+|.|+||.||+|.. .++..+|+|.+.... .....+..|+.+++.+ +|+||+++++++..      ....
T Consensus        16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   94 (282)
T cd06636          16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL   94 (282)
T ss_pred             hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence            3556777789999999999995 568899999986543 2345678899999998 69999999999853      4568


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      +++|||+++|+|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus        95 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~  173 (282)
T cd06636          95 WLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR  173 (282)
T ss_pred             EEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEeeCcchhhhhc
Confidence            9999999999999999765566789999999999999999999999 999999999999999999999999999875432


Q ss_pred             ----CCCcCCCccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCCh
Q 018244          209 ----GRSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS  279 (359)
Q Consensus       209 ----~~~~~~t~~y~aPE~~~-----~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (359)
                          .....++..|+|||.+.     ...++.++||||||+++|+|++|..||.........    ..............
T Consensus       174 ~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~  249 (282)
T cd06636         174 TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL----FLIPRNPPPKLKSK  249 (282)
T ss_pred             cccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh----hhHhhCCCCCCccc
Confidence                22345788999999886     345888999999999999999999887543211111    11111111111123


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          280 DEGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       280 ~~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                      ..+.++.+++.+||+.||.+|||+.++++
T Consensus       250 ~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         250 KWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             ccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            45678999999999999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=2.5e-40  Score=302.25  Aligned_cols=253  Identities=17%  Similarity=0.223  Sum_probs=204.9

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      |..++.||+|+||.||+|.. .++..+|+|.+.....   .....+.+|+++++.++|+|++++++++......++||||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            56777889999999999994 4688999999875432   2245688899999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCcCC
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST  214 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~  214 (359)
                      +.+ +|.+.+.. ....+++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++..........+
T Consensus       107 ~~g-~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~-~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  183 (317)
T cd06635         107 CLG-SASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVG  183 (317)
T ss_pred             CCC-CHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcccEEECCCCCEEEecCCCccccCCcccccC
Confidence            975 78777753 345689999999999999999999999 999999999999999999999999999887776666778


Q ss_pred             CccccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          215 NLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       215 t~~y~aPE~~~---~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      +..|+|||.+.   .+.++.++||||||+++|+|++|..||............    .............+..+.+++.+
T Consensus       184 ~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~  259 (317)
T cd06635         184 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI----AQNESPTLQSNEWSDYFRNFVDS  259 (317)
T ss_pred             CccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHH----HhccCCCCCCccccHHHHHHHHH
Confidence            89999999974   356889999999999999999999887654222111111    11111111223456789999999


Q ss_pred             hcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          292 CLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      ||+.+|.+||++.++++.+-.......
T Consensus       260 ~l~~~p~~Rpt~~~il~~~~~~~~~~~  286 (317)
T cd06635         260 CLQKIPQDRPTSEELLKHMFVLRERPE  286 (317)
T ss_pred             HccCCcccCcCHHHHHhChhhhccCcc
Confidence            999999999999999987665544333

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=7.3e-41  Score=296.30  Aligned_cols=243  Identities=20%  Similarity=0.216  Sum_probs=199.8

Q ss_pred             ccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC-----chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-----PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      |...+.||+|++|.||+|... ++..||+|.+.....     ...+.+.+|+++++.++|+||+++++++......++++
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL   81 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence            445567899999999999965 788999999875432     23457889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---  209 (359)
                      ||+++++|.+++.+  ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++......   
T Consensus        82 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~  158 (258)
T cd06632          82 ELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDR-NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFA  158 (258)
T ss_pred             EecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEccCccceeccccccc
Confidence            99999999999863  34689999999999999999999999 9999999999999999999999999998765433   


Q ss_pred             CCcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          210 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                      ....++..|+|||.+.... ++.++|+||||+++|+|++|+.||...........    ..........+...+.++.++
T Consensus       159 ~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l  234 (258)
T cd06632         159 KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFK----IGRSKELPPIPDHLSDEAKDF  234 (258)
T ss_pred             cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHH----HHhcccCCCcCCCcCHHHHHH
Confidence            3445788899999988766 89999999999999999999988755431111111    111011122344567889999


Q ss_pred             HHHhcccCCCCCCCHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~  308 (359)
                      +.+||+.+|++|||+.+++.
T Consensus       235 i~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         235 ILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             HHHHhhcCcccCcCHHHHhc
Confidence            99999999999999999985

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=6.1e-41  Score=298.68  Aligned_cols=247  Identities=18%  Similarity=0.275  Sum_probs=199.5

Q ss_pred             ccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCC------chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW------PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      |...+.||+|++|.||+|. ..++..+|+|.+.....      ...+.+.+|+++++.++|+||+++++++.+.+..++|
T Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v   81 (268)
T cd06630           2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF   81 (268)
T ss_pred             ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence            4455667999999999998 46788999999975331      1245688999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC-CeEEeccCCcccCCCC-
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~-~~kl~DFg~a~~~~~~-  209 (359)
                      +||+++++|.+++.  ....+++..+..++.|++.||.|||++ +++|+||+|+||+++.++ .++|+|||.+...... 
T Consensus        82 ~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~ql~~al~~LH~~-~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~  158 (268)
T cd06630          82 VEWMAGGSVSHLLS--KYGAFKEAVIINYTEQLLRGLSYLHEN-QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG  158 (268)
T ss_pred             EeccCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence            99999999999986  345689999999999999999999999 999999999999998775 5999999998765432 


Q ss_pred             -------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHH
Q 018244          210 -------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       210 -------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                             ....++..|+|||.+.+..++.++||||+|+++|+|++|..|+........... .............+...+
T Consensus       159 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  237 (268)
T cd06630         159 TGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLAL-IFKIASATTAPSIPEHLS  237 (268)
T ss_pred             ccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHH-HHHHhccCCCCCCchhhC
Confidence                   123567899999999888899999999999999999999988754322111111 111111111233445677


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .++.+++.+||..+|++|||+.++++.
T Consensus       238 ~~~~~~i~~~l~~~p~~R~~~~~ll~~  264 (268)
T cd06630         238 PGLRDVTLRCLELQPEDRPPSRELLKH  264 (268)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence            889999999999999999999999853

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=4.7e-41  Score=302.45  Aligned_cols=244  Identities=16%  Similarity=0.223  Sum_probs=199.6

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCC
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  137 (359)
                      +...+.||.|++|.||++.. .++..+|+|.+........+.+.+|+.+++.++|+|++++++++...+..++++||+++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            33445669999999999984 56889999998765545556788999999999999999999999999999999999999


Q ss_pred             CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CCcC
Q 018244          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYS  213 (359)
Q Consensus       138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~~~  213 (359)
                      ++|.+++..   ..+++..+..++.|++.||+|||++ +++|+||+|+||+++.++.++|+|||.+......    ....
T Consensus       101 ~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~  176 (285)
T cd06648         101 GALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ-GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLV  176 (285)
T ss_pred             CCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCChhhEEEcCCCcEEEcccccchhhccCCccccccc
Confidence            999999853   5689999999999999999999999 9999999999999999999999999987654332    2345


Q ss_pred             CCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhc
Q 018244          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL  293 (359)
Q Consensus       214 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  293 (359)
                      ++..|+|||.+.+..++.++||||||+++|+|++|..||............... ..+.  ...+...+..+.+++.+||
T Consensus       177 ~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~l~~li~~~l  253 (285)
T cd06648         177 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN-LPPK--LKNLHKVSPRLRSFLDRML  253 (285)
T ss_pred             CCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc-CCCC--CcccccCCHHHHHHHHHHc
Confidence            788999999998888999999999999999999999887654322211111111 1111  1112235678999999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 018244          294 QYEPRERPNPRSLVTA  309 (359)
Q Consensus       294 ~~dp~~Rps~~~il~~  309 (359)
                      +.+|++|||+.+++++
T Consensus       254 ~~~p~~Rpt~~~il~~  269 (285)
T cd06648         254 VRDPAQRATAAELLNH  269 (285)
T ss_pred             ccChhhCcCHHHHccC
Confidence            9999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=8.8e-41  Score=296.70  Aligned_cols=246  Identities=18%  Similarity=0.235  Sum_probs=203.1

Q ss_pred             cccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeee--CCcceEEE
Q 018244           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVA  132 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~  132 (359)
                      +|++++.||.|+||.||++. ..++..+|+|.+.....  ...+.+.+|+++++.++|+||+++++++..  ....+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            36788889999999999998 45678999999875432  234568889999999999999999998754  34679999


Q ss_pred             ecCCCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhh-----cCCCcccccCCCCCeeeCCCCCeEEeccCCccc
Q 018244          133 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCT-----SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (359)
Q Consensus       133 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH-----~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~  205 (359)
                      ||+++++|.+++...  ....+++..++.++.|++.||.|||     +. +++|+||+|+||++++++.++|+|||++..
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~-~i~h~dl~p~nili~~~~~~kl~d~g~~~~  159 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN-TVLHRDLKPANIFLDANNNVKLGDFGLAKI  159 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC-cceecCCCHHHEEEecCCCEEEeccccccc
Confidence            999999999998642  2467899999999999999999999     87 999999999999999999999999999887


Q ss_pred             CCCCC----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHH
Q 018244          206 SRDGR----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE  281 (359)
Q Consensus       206 ~~~~~----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (359)
                      .....    ...++..|+|||.+.+..++.++|+||||+++|+|++|..|+............     ........+...
T Consensus       160 ~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~  234 (265)
T cd08217         160 LGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKI-----KEGKFRRIPYRY  234 (265)
T ss_pred             ccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHH-----hcCCCCCCcccc
Confidence            65433    345788999999999888999999999999999999999888765432222111     111122344566


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          282 GTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       282 ~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.++.+++.+||+.+|++|||+.+|+++
T Consensus       235 ~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         235 SSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            7889999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=4.4e-41  Score=299.11  Aligned_cols=249  Identities=18%  Similarity=0.254  Sum_probs=202.1

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      +|++++.||.|++|.||++... +++.+|+|.+..... .....+.+|+++++.++||||+++++.+......++++||+
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence            4667788899999999999954 688999999987543 33456889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--CCc
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSY  212 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--~~~  212 (359)
                      ++++|.+++... ...+++..+..++.|++.||.|||+ . +++|+||||+||++++++.++|+|||.+......  ...
T Consensus        82 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~-~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~  159 (265)
T cd06605          82 DGGSLDKILKEV-QGRIPERILGKIAVAVLKGLTYLHEKH-KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTF  159 (265)
T ss_pred             CCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHcCCC-CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcc
Confidence            999999998642 2678999999999999999999999 7 9999999999999999999999999998754322  225


Q ss_pred             CCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHH-hhhhhhhhccccccCCCChH-HHHHHHHHHH
Q 018244          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI-RDRNIQTLTDSCLEGQFSSD-EGTELVRLAS  290 (359)
Q Consensus       213 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~  290 (359)
                      .++..|+|||.+.+..++.++||||||+++|+|++|..|+........ ............ ....+.. .+.++.++|.
T Consensus       160 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~  238 (265)
T cd06605         160 VGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP-PPRLPSGKFSPDFQDFVN  238 (265)
T ss_pred             cCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC-CCCCChhhcCHHHHHHHH
Confidence            678899999999988899999999999999999999988765411000 000011111111 1112222 6778999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~  309 (359)
                      +||..||++|||+.+++.+
T Consensus       239 ~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         239 LCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             HHcCCCchhCcCHHHHhhC
Confidence            9999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=5.2e-41  Score=303.41  Aligned_cols=248  Identities=18%  Similarity=0.234  Sum_probs=204.0

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ....|.+++.||+|+||.||++.. .++..||+|.+........+.+.+|+.+++.++|||++++++++...+..++|+|
T Consensus        17 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e   96 (293)
T cd06647          17 PKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME   96 (293)
T ss_pred             chhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence            345778889999999999999984 4678899999876555556678999999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC---
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~---  210 (359)
                      |+++++|.+++.   ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++.......   
T Consensus        97 ~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~-gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~  172 (293)
T cd06647          97 YLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR  172 (293)
T ss_pred             cCCCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhC-CEeeccCCHHHEEEcCCCCEEEccCcceeccccccccc
Confidence            999999999984   34688999999999999999999999 99999999999999999999999999876544332   


Q ss_pred             -CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       211 -~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                       ...+++.|+|||.+....++.++|+||||+++|++++|..||...........   ...........+...+..+.+++
T Consensus       173 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li  249 (293)
T cd06647         173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL---IATNGTPELQNPEKLSAIFRDFL  249 (293)
T ss_pred             ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee---hhcCCCCCCCCccccCHHHHHHH
Confidence             23567889999999888899999999999999999999998865432111000   00011111112234567899999


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 018244          290 SRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+||..+|++||++.+++.+
T Consensus       250 ~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         250 NRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             HHHccCChhhCcCHHHHhcC
Confidence            99999999999999999865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=1.6e-40  Score=295.21  Aligned_cols=243  Identities=18%  Similarity=0.259  Sum_probs=199.9

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      |.+.+.||.|+||.||+|.. .++..||+|.+......  ..+.+.+|+++++.++|+||+++++++...+..++|+||+
T Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC   81 (264)
T ss_pred             ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence            66778889999999999985 46889999999866543  5667899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----  210 (359)
                      ++++|.+++.  ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.+||+|||++.......     
T Consensus        82 ~~~~L~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~  158 (264)
T cd06626          82 SGGTLEELLE--HGRILDEHVIRVYTLQLLEGLAYLHSH-GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGE  158 (264)
T ss_pred             CCCcHHHHHh--hcCCCChHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccc
Confidence            9999999986  344588999999999999999999999 99999999999999999999999999987654332     


Q ss_pred             ---CcCCCccccCcccccCCC---CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCCh--HHH
Q 018244          211 ---SYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS--DEG  282 (359)
Q Consensus       211 ---~~~~t~~y~aPE~~~~~~---~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  282 (359)
                         ...++..|+|||++.+..   ++.++||||||+++|++++|..||...............    ......+.  ..+
T Consensus       159 ~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~  234 (264)
T cd06626         159 EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA----GHKPPIPDSLQLS  234 (264)
T ss_pred             cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc----CCCCCCCcccccC
Confidence               234678999999998766   889999999999999999999988643211111101110    11112222  236


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                      ..+.+++.+||+.+|++|||+.+++.
T Consensus       235 ~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         235 PEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHhc
Confidence            78999999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=6.4e-41  Score=301.25  Aligned_cols=249  Identities=18%  Similarity=0.246  Sum_probs=196.8

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      |+.++.||.|++|.||+|.. .++..||||.+.....  .....+.+|+++++.++||||+++++++...+..++||||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (284)
T cd07860           2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL   81 (284)
T ss_pred             ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence            56788889999999999985 4688999999875432  22356889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----C
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----~  211 (359)
                      . ++|.+++.......+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++.......    .
T Consensus        82 ~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~  159 (284)
T cd07860          82 H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH  159 (284)
T ss_pred             c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccc
Confidence            6 5899988655566789999999999999999999999 99999999999999999999999999987654322    2


Q ss_pred             cCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcc--------------------
Q 018244          212 YSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD--------------------  270 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~--------------------  270 (359)
                      ..++..|+|||.+.+.. ++.++||||||+++|+|+||+.||..................                    
T Consensus       160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd07860         160 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFP  239 (284)
T ss_pred             ccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcc
Confidence            34578899999887654 688899999999999999999988654321111110000000                    


Q ss_pred             cccc---CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          271 SCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       271 ~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ....   .......+.++.+++.+||+.||++|||+++++.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  281 (284)
T cd07860         240 KWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH  281 (284)
T ss_pred             cccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence            0000   00012245678999999999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=8.7e-41  Score=297.65  Aligned_cols=244  Identities=18%  Similarity=0.215  Sum_probs=194.6

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC-----chHHHHHHHHHHHhcCCCcccccccceeeeC--Ccce
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-----PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL  129 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~  129 (359)
                      .|...+.||+|+||.||+|.. .++..||+|.+.....     .....+.+|+.+++.++||||+++++++...  ...+
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT   82 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence            355667779999999999985 4688999999864321     2234688899999999999999999988653  5678


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +++||+++++|.+++.  ....+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus        83 l~~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~LH~~-~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~  159 (266)
T cd06651          83 IFMEYMPGGSVKDQLK--AYGALTESVTRKYTRQILEGMSYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI  159 (266)
T ss_pred             EEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEccCCCccccccc
Confidence            9999999999999986  344689999999999999999999999 9999999999999999999999999998754321


Q ss_pred             -------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHH
Q 018244          210 -------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       210 -------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                             ....++..|+|||.+.+..++.++||||||+++|+|++|+.||.........    ............+...+
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~----~~~~~~~~~~~~~~~~~  235 (266)
T cd06651         160 CMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAI----FKIATQPTNPQLPSHIS  235 (266)
T ss_pred             cccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHH----HHHhcCCCCCCCchhcC
Confidence                   1234678999999999888999999999999999999999887644221111    11111111223344556


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+.+++ +||..+|++|||+++++++
T Consensus       236 ~~~~~li-~~~~~~p~~Rp~~~eil~h  261 (266)
T cd06651         236 EHARDFL-GCIFVEARHRPSAEELLRH  261 (266)
T ss_pred             HHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence            7788888 7888999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.2e-40  Score=299.86  Aligned_cols=248  Identities=14%  Similarity=0.147  Sum_probs=195.3

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-CCcccccccceee-----eCCcce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCC-----EGDERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~-----~~~~~~  129 (359)
                      .+|++++.||+|+||.||+|.. .++..+|+|.+.... .....+.+|+.+++.+ +|+||+++++++.     .++..+
T Consensus        18 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~   96 (286)
T cd06638          18 DTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLW   96 (286)
T ss_pred             cceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEE
Confidence            4567888899999999999985 467899999886533 2235678899999999 6999999999874     345689


Q ss_pred             EEEecCCCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          130 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      +||||+++++|.+++...  ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++....
T Consensus        97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~  175 (286)
T cd06638          97 LVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN-KTIHRDVKGNNILLTTEGGVKLVDFGVSAQLT  175 (286)
T ss_pred             EEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC-CccccCCCHHhEEECCCCCEEEccCCceeecc
Confidence            999999999999987532  345688999999999999999999999 99999999999999999999999999987654


Q ss_pred             CC----CCcCCCccccCcccccC-----CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCC
Q 018244          208 DG----RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS  278 (359)
Q Consensus       208 ~~----~~~~~t~~y~aPE~~~~-----~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (359)
                      ..    ....++..|+|||++..     ..++.++||||||+++|+|++|+.|+.............. ....  ....+
T Consensus       176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~-~~~~--~~~~~  252 (286)
T cd06638         176 STRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPR-NPPP--TLHQP  252 (286)
T ss_pred             cCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccc-cCCC--cccCC
Confidence            32    23457889999998853     3478899999999999999999988765422111110000 0000  11112


Q ss_pred             hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          279 SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ...+.++.+++.+||+.||++|||+.++++.
T Consensus       253 ~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         253 ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             CCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            3345679999999999999999999999875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=1.1e-40  Score=296.74  Aligned_cols=244  Identities=16%  Similarity=0.178  Sum_probs=196.2

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC-----chHHHHHHHHHHHhcCCCcccccccceeeeC--Ccce
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-----PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL  129 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~  129 (359)
                      .|.+.+.||+|+||.||+|.. .++..||+|.+.....     ...+.+.+|+++++.++|+||+++++++.+.  ..++
T Consensus         3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (265)
T cd06652           3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLS   82 (265)
T ss_pred             cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEE
Confidence            456677789999999999985 5688999998864321     2245688899999999999999999988764  4678


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC-
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-  208 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~-  208 (359)
                      ++|||+++++|.+++..  ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++..... 
T Consensus        83 ~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~  159 (265)
T cd06652          83 IFMEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSN-MIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI  159 (265)
T ss_pred             EEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence            99999999999999863  34588999999999999999999999 999999999999999999999999999875432 


Q ss_pred             ------CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHH
Q 018244          209 ------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       209 ------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                            .....++..|+|||.+.+..++.++||||||+++|+|++|+.||...........    ..........+...+
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~  235 (265)
T cd06652         160 CLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFK----IATQPTNPVLPPHVS  235 (265)
T ss_pred             cccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHH----HhcCCCCCCCchhhC
Confidence                  1234578899999999888899999999999999999999988764422211111    111111223445667


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ..+.+++.+||. +|++||+++++++.
T Consensus       236 ~~~~~~i~~~l~-~p~~Rp~~~~il~~  261 (265)
T cd06652         236 DHCRDFLKRIFV-EAKLRPSADELLRH  261 (265)
T ss_pred             HHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence            789999999995 89999999998863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=2.2e-40  Score=295.45  Aligned_cols=249  Identities=17%  Similarity=0.258  Sum_probs=200.3

Q ss_pred             ccccccCCCCCCcEEEEEEeCC--CcEEEEEEeCCCC----------CchHHHHHHHHHHHhc-CCCcccccccceeeeC
Q 018244           59 ENIVSEHGEKAPNVVYKGKLEN--QFRIAVKRFNRSA----------WPDARQFLEEARAVGQ-LRNRRLANLLGCCCEG  125 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~  125 (359)
                      |.+.+.||.|+||.||+|....  +..+|+|.+....          ......+.+|+.++.+ ++|+||+++++++...
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   81 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN   81 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence            5677888999999999999654  7889999886432          1123457788888875 6899999999999999


Q ss_pred             CcceEEEecCCCCCHhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCc
Q 018244          126 DERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (359)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a  203 (359)
                      +..+++|||+++++|.+++..  .....+++..++.++.|++.||.|||+..+++|+||+|+||+++.++.++|+|||.+
T Consensus        82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~  161 (269)
T cd08528          82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLA  161 (269)
T ss_pred             CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccce
Confidence            999999999999999998743  134568999999999999999999996338999999999999999999999999998


Q ss_pred             ccCCCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChH
Q 018244          204 KNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD  280 (359)
Q Consensus       204 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (359)
                      ......   ....++..|+|||.+.+..++.++||||||+++|+|++|..|+.................    .......
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~  237 (269)
T cd08528         162 KQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVY----EPLPEGM  237 (269)
T ss_pred             eecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccC----CcCCccc
Confidence            865544   234578899999999988899999999999999999999988765433222221111111    1111123


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 018244          281 EGTELVRLASRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~L~  311 (359)
                      .+..+.+++.+||+.||++|||+.++..+++
T Consensus       238 ~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         238 YSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             CCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            4678999999999999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=1.2e-40  Score=296.94  Aligned_cols=251  Identities=15%  Similarity=0.146  Sum_probs=196.4

Q ss_pred             HHHHHHhcCCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-CCcccccccceeee
Q 018244           47 ETLRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE  124 (359)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~  124 (359)
                      .+.....++|..++.++ +|+|+||.||++.. .++..+|+|.+........     |+.....+ +|+||+++++++..
T Consensus         7 ~~~~~~~~~~~~~~~~~-lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~   80 (267)
T PHA03390          7 SELVQFLKNCEIVKKLK-LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTT   80 (267)
T ss_pred             HHHHHHHHhhcccccee-ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEec
Confidence            33333444444444443 59999999999984 5688899999875432221     22222222 69999999999999


Q ss_pred             CCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC-CeEEeccCCc
Q 018244          125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLM  203 (359)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~-~~kl~DFg~a  203 (359)
                      .+..++||||+++++|.+++..  ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++ .++|+|||++
T Consensus        81 ~~~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~~l~dfg~~  157 (267)
T PHA03390         81 LKGHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKH-NIIHNDIKLENVLYDRAKDRIYLCDYGLC  157 (267)
T ss_pred             CCeeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence            9999999999999999999963  34899999999999999999999999 999999999999999888 9999999999


Q ss_pred             ccCCCCCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          204 KNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       204 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                      ..........++..|+|||++.+..++.++||||||+++|+|++|..||..................  .........+.
T Consensus       158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  235 (267)
T PHA03390        158 KIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ--KKLPFIKNVSK  235 (267)
T ss_pred             eecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc--ccCCcccccCH
Confidence            8877666677899999999999888999999999999999999999988644322211111111111  11122345778


Q ss_pred             HHHHHHHHhcccCCCCCCC-HHHHHH
Q 018244          284 ELVRLASRCLQYEPRERPN-PRSLVT  308 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps-~~~il~  308 (359)
                      .+.+++.+||+.||.+||+ ++++++
T Consensus       236 ~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        236 NANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             HHHHHHHHHhccChhhCCchHHHHhc
Confidence            8999999999999999996 588875

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=4.8e-41  Score=297.86  Aligned_cols=244  Identities=19%  Similarity=0.210  Sum_probs=202.3

Q ss_pred             ccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      |++.+.||.|+||.||+|... ++..||+|.+.....   ...+.+.+|++++++++||||+++++.+..+...++|+||
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (258)
T cd05578           2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL   81 (258)
T ss_pred             ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence            677888899999999999954 588999999975432   2356789999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---CC
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RS  211 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---~~  211 (359)
                      +.+++|.+++..  ...+++..+..++.|++.||.|||++ +++|+||+|+||++++++.++|+|||++......   ..
T Consensus        82 ~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~  158 (258)
T cd05578          82 LLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSK-GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTS  158 (258)
T ss_pred             CCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccc
Confidence            999999999863  35789999999999999999999999 9999999999999999999999999998765543   23


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ..++..|+|||.+.+..++.++|+||||+++|+|++|..|+......... ........  .....+...+.++.+++.+
T Consensus       159 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~i~~  235 (258)
T cd05578         159 TSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRD-QIRAKQET--ADVLYPATWSTEAIDAINK  235 (258)
T ss_pred             cCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHH-HHHHHhcc--ccccCcccCcHHHHHHHHH
Confidence            45778899999998888999999999999999999999988765421000 00111110  1223445567899999999


Q ss_pred             hcccCCCCCCCH--HHHHH
Q 018244          292 CLQYEPRERPNP--RSLVT  308 (359)
Q Consensus       292 cl~~dp~~Rps~--~~il~  308 (359)
                      ||+.||.+||++  +++++
T Consensus       236 ~l~~~p~~R~~~~~~~l~~  254 (258)
T cd05578         236 LLERDPQKRLGDNLKDLKN  254 (258)
T ss_pred             HccCChhHcCCccHHHHhc
Confidence            999999999999  66553

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-41  Score=309.12  Aligned_cols=250  Identities=24%  Similarity=0.356  Sum_probs=212.4

Q ss_pred             ccCCCCCCcEEEEEEeC---C--CcEEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           63 SEHGEKAPNVVYKGKLE---N--QFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~---~--~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      +.||.|-||.||+|+..   .  .-.||||..+.+. ..+.+.|+.|.-+|+.++|||||+++|+|.+ ...|||||.++
T Consensus       395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL~~  473 (974)
T KOG4257|consen  395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMELAP  473 (974)
T ss_pred             HhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEeccc
Confidence            45799999999999842   2  3468999998754 3446789999999999999999999999965 46899999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCcCC--
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST--  214 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~--  214 (359)
                      -|.|..|+.. ++..++......+++||+.||+|||++ +.|||||...|||+.....|||+|||+++...+..-+..  
T Consensus       474 ~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSk-rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~  551 (974)
T KOG4257|consen  474 LGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESK-RFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASR  551 (974)
T ss_pred             chhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhh-chhhhhhhhhheeecCcceeeecccchhhhccccchhhccc
Confidence            9999999976 567899999999999999999999999 999999999999999999999999999998877654432  


Q ss_pred             ---CccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          215 ---NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       215 ---t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                         ...|||||.+.-.+++.++|||-|||.+||+++ |..||.+-..     ......+....+...|+.+++.+..|+.
T Consensus       552 ~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN-----sDVI~~iEnGeRlP~P~nCPp~LYslms  626 (974)
T KOG4257|consen  552 GKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN-----SDVIGHIENGERLPCPPNCPPALYSLMS  626 (974)
T ss_pred             cccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc-----cceEEEecCCCCCCCCCCCChHHHHHHH
Confidence               357999999999999999999999999999876 7778775422     2233334444556678889999999999


Q ss_pred             HhcccCCCCCCCHHHHHHHHHHhhhcccCC
Q 018244          291 RCLQYEPRERPNPRSLVTALVTLQKDTEVS  320 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~L~~~~~~~~~~  320 (359)
                      +||++||.+||.+.++...|..+.......
T Consensus       627 kcWayeP~kRPrftei~~~lsdv~qeek~~  656 (974)
T KOG4257|consen  627 KCWAYEPSKRPRFTEIKAILSDVLQEEKIN  656 (974)
T ss_pred             HHhccCcccCCcHHHHHHHHHHHHHHhhhh
Confidence            999999999999999999999987754443

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=6.4e-41  Score=301.90  Aligned_cols=251  Identities=18%  Similarity=0.211  Sum_probs=195.4

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEEEec
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ++..++.||+|+||.||++.. .++..+|+|.+..... .....+.+|+.++.++. |+||+++++++..+...+++|||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            445667789999999999984 4688999999875432 23456889999999996 99999999999998899999999


Q ss_pred             CCCCCHhhhh---hcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--
Q 018244          135 MPNDTLAKHL---FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (359)
Q Consensus       135 ~~~gsL~~~l---~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--  209 (359)
                      +.. ++.++.   .......+++..+..++.|++.||+|||+..+++||||||+||+++.++.++|+|||++......  
T Consensus        85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~  163 (288)
T cd06616          85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA  163 (288)
T ss_pred             ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCc
Confidence            865 555543   22234679999999999999999999997448999999999999999999999999998754332  


Q ss_pred             -CCcCCCccccCcccccCC---CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          210 -RSYSTNLAFTPPEYLRTG---RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                       ....++..|+|||.+.+.   .++.++||||||+++|+|++|+.||..................+..........+.++
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  243 (288)
T cd06616         164 KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSF  243 (288)
T ss_pred             cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHH
Confidence             234578899999999876   5889999999999999999999887654211000000000011111112223467789


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHH
Q 018244          286 VRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+|+.+||+.||++|||+++++..
T Consensus       244 ~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         244 VNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             HHHHHHHccCChhhCcCHHHHhcC
Confidence            999999999999999999999875

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=1.3e-40  Score=294.67  Aligned_cols=245  Identities=17%  Similarity=0.250  Sum_probs=201.6

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      |.+.+.||.|+||.||+|.. .++..+|+|.+.....  ...+.+.+|+++++.++|+||+++++.+......++|+||+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   81 (257)
T cd08225           2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC   81 (257)
T ss_pred             ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence            56677889999999999995 4578899999876422  23456789999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCC-eEEeccCCcccCCCCC----
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN-PRLSCFGLMKNSRDGR----  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~-~kl~DFg~a~~~~~~~----  210 (359)
                      ++++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++. ++|+|||.+.......    
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~  160 (257)
T cd08225          82 DGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR-KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY  160 (257)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence            999999999764455689999999999999999999999 9999999999999998754 6999999987655432    


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ...+++.|+|||.+.+..++.++|+||||+++|+|++|..|+................     ........+.++.+++.
T Consensus       161 ~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~  235 (257)
T cd08225         161 TCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY-----FAPISPNFSRDLRSLIS  235 (257)
T ss_pred             ccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccc-----CCCCCCCCCHHHHHHHH
Confidence            2357888999999988889999999999999999999998886543322222111111     11223345678999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~  309 (359)
                      +||..+|++|||+.+++..
T Consensus       236 ~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         236 QLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             HHhccChhhCcCHHHHhhC
Confidence            9999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3.3e-40  Score=297.26  Aligned_cols=250  Identities=17%  Similarity=0.233  Sum_probs=199.1

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeC--CcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e  133 (359)
                      .|+.++.||.|++|.||+|.. .++..+|+|.+..... .....+.+|+++++.++||||+++++++...  ..+++|||
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   81 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME   81 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence            456778889999999999995 4688999999986533 2356689999999999999999999988653  46899999


Q ss_pred             cCCCCCHhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--
Q 018244          134 YMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--  209 (359)
                      |+++++|.+++..  .....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++......  
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~  160 (287)
T cd06621          82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR-KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA  160 (287)
T ss_pred             ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEecCCeEEEeecccccccccccc
Confidence            9999999988653  2345689999999999999999999999 9999999999999999999999999998754432  


Q ss_pred             CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchh-----HHHhhhhhhhhccccccCCCC--hHHH
Q 018244          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-----DLIRDRNIQTLTDSCLEGQFS--SDEG  282 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~  282 (359)
                      ....++..|+|||.+.+..++.++||||||+++|+|++|..|+.....     ...... ......+.......  ...+
T Consensus       161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  239 (287)
T cd06621         161 GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSY-IVNMPNPELKDEPGNGIKWS  239 (287)
T ss_pred             ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHH-HhcCCchhhccCCCCCCchH
Confidence            234567889999999988899999999999999999999988765411     001100 00001111111111  2356


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+.+++.+||+.+|++|||+.+++..
T Consensus       240 ~~~~~li~~~l~~~p~~Rpt~~eil~~  266 (287)
T cd06621         240 EEFKDFIKQCLEKDPTRRPTPWDMLEH  266 (287)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence            789999999999999999999999874

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=2.3e-40  Score=296.73  Aligned_cols=243  Identities=16%  Similarity=0.250  Sum_probs=201.4

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .|.+++.||.|+||.||+|.. .++..+|+|.+..... .....+.+|+.++..++||||+++++++..+...++||||+
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            356777889999999999985 4688999999875432 23456889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----C
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----~  211 (359)
                      ++++|.+++.   ...+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++.......    .
T Consensus        85 ~~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (277)
T cd06641          85 GGGSALDLLE---PGPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT  160 (277)
T ss_pred             CCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccC-CeecCCCCHHhEEECCCCCEEEeecccceecccchhhhcc
Confidence            9999999984   45689999999999999999999999 99999999999999999999999999987654332    2


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ..++..|+|||.+.+..++.++|+||||+++|+|++|..|+...........     .........+...+.++.+++.+
T Consensus       161 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~  235 (277)
T cd06641         161 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFL-----IPKNNPPTLEGNYSKPLKEFVEA  235 (277)
T ss_pred             ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHH-----HhcCCCCCCCcccCHHHHHHHHH
Confidence            3567889999999888889999999999999999999988764332211111     11111222334456789999999


Q ss_pred             hcccCCCCCCCHHHHHHH
Q 018244          292 CLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~  309 (359)
                      ||+.+|++||++.+++.+
T Consensus       236 ~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         236 CLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             HccCChhhCcCHHHHHhC
Confidence            999999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=8.2e-41  Score=300.77  Aligned_cols=249  Identities=19%  Similarity=0.265  Sum_probs=196.6

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .|++++.||.|+||.||+|... +++.+|+|.+......  ..+.+.+|+++++.++||||+++++++..+...++|+||
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF   81 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence            5678889999999999999964 5889999998754322  245678899999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----  210 (359)
                      +++++|..+..  ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.......    
T Consensus        82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~  158 (286)
T cd07846          82 VDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSH-NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYT  158 (286)
T ss_pred             CCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccC
Confidence            99988887764  334589999999999999999999999 99999999999999999999999999987654322    


Q ss_pred             CcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh---h-----------------hc
Q 018244          211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ---T-----------------LT  269 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~---~-----------------~~  269 (359)
                      ...++..|+|||++.+. .++.++||||||+++|+|++|..||+.............   .                 ..
T Consensus       159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T cd07846         159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMR  238 (286)
T ss_pred             cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccc
Confidence            23467889999998753 478899999999999999999987764322110000000   0                 00


Q ss_pred             cccccC-----CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          270 DSCLEG-----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       270 ~~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+....     ......+..+.+|+.+||+.+|++|||+.+++..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  283 (286)
T cd07846         239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH  283 (286)
T ss_pred             cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence            000000     0012346789999999999999999999998863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-40  Score=296.30  Aligned_cols=247  Identities=15%  Similarity=0.181  Sum_probs=198.0

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-CCcccccccceeeeCC------cc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGD------ER  128 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~------~~  128 (359)
                      ..|.+++.||.|++|.||+|.. .++..+|+|.+..... ..+.+.+|+.+++.+ .|+||+++++++....      ..
T Consensus         6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   84 (275)
T cd06608           6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL   84 (275)
T ss_pred             hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence            4677888899999999999996 4678899999876543 346788999999999 6999999999997644      48


Q ss_pred             eEEEecCCCCCHhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          129 LLVAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      ++||||+++++|.+++....  ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++...
T Consensus        85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~  163 (275)
T cd06608          85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN-KVIHRDIKGQNILLTKNAEVKLVDFGVSAQL  163 (275)
T ss_pred             EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHHHEEEccCCeEEECCCccceec
Confidence            99999999999999886433  46789999999999999999999999 9999999999999999999999999998764


Q ss_pred             CCC----CCcCCCccccCcccccC-----CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCC
Q 018244          207 RDG----RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF  277 (359)
Q Consensus       207 ~~~----~~~~~t~~y~aPE~~~~-----~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (359)
                      ...    ....++..|+|||.+..     ..++.++||||||+++|+|++|..||...............   .......
T Consensus       164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~  240 (275)
T cd06608         164 DSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN---PPPTLKS  240 (275)
T ss_pred             ccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc---CCCCCCc
Confidence            332    23457889999998753     24778999999999999999999888643221111111111   0001111


Q ss_pred             ChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          278 SSDEGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                      +...+.++.+++.+||..||++|||+.+++.
T Consensus       241 ~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         241 PENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             hhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            2335678999999999999999999999986

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=3.1e-40  Score=297.19  Aligned_cols=250  Identities=17%  Similarity=0.226  Sum_probs=203.9

Q ss_pred             cCCCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           54 SGFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        54 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      +....|.....+|.|++|.||+|... ++..+|+|++..... ..+.+.+|++.++.++|+|++++++++......++++
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   94 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM   94 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence            33445667778899999999999965 688999999986543 4567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---  209 (359)
                      ||+++++|.+++.... ..+++..+..++.|++.||.|||+. |++|+||+|+||+++.++.++|+|||++......   
T Consensus        95 e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~-gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  172 (286)
T cd06614          95 EYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQ-NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK  172 (286)
T ss_pred             eccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCChhhEEEcCCCCEEECccchhhhhccchhh
Confidence            9999999999997522 4799999999999999999999998 9999999999999999999999999987654432   


Q ss_pred             -CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                       ....++..|+|||.+.+..++.++|+||||+++|+|++|..|+.................   .........+..+.++
T Consensus       173 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~l  249 (286)
T cd06614         173 RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGI---PPLKNPEKWSPEFKDF  249 (286)
T ss_pred             hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC---CCCcchhhCCHHHHHH
Confidence             233467889999999888899999999999999999999988765432211111111000   0111122356789999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+||+.+|.+|||+.+++..
T Consensus       250 i~~~l~~~p~~Rpt~~~il~~  270 (286)
T cd06614         250 LNKCLVKDPEKRPSAEELLQH  270 (286)
T ss_pred             HHHHhccChhhCcCHHHHhhC
Confidence            999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1.1e-40  Score=304.42  Aligned_cols=242  Identities=15%  Similarity=0.233  Sum_probs=182.8

Q ss_pred             ccCCCCCCcEEEEEEeC---CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeee--CCcceEEEecCCC
Q 018244           63 SEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVAEYMPN  137 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~  137 (359)
                      .+||+|+||+||+|...   ++..||+|.+.....  ...+.+|+++++.++||||+++++++..  ....++||||+.+
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH   84 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence            35799999999999854   357899999875432  3457889999999999999999998854  4568999999875


Q ss_pred             CCHhhhhhcC-------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee----CCCCCeEEeccCCcccC
Q 018244          138 DTLAKHLFHW-------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       138 gsL~~~l~~~-------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll----~~~~~~kl~DFg~a~~~  206 (359)
                       +|.+++...       ....+++..+..++.|++.||.|||+. +++||||||+||++    +.++.+||+|||+++..
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~  162 (317)
T cd07867          85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  162 (317)
T ss_pred             -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence             787776421       123588999999999999999999999 99999999999999    46679999999999865


Q ss_pred             CCC-------CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHh---------hhhh----
Q 018244          207 RDG-------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR---------DRNI----  265 (359)
Q Consensus       207 ~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~---------~~~~----  265 (359)
                      ...       ....+|..|+|||++.+. .++.++||||||+++|||+||..||.....+...         ....    
T Consensus       163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (317)
T cd07867         163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMG  242 (317)
T ss_pred             CCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcC
Confidence            432       234568899999998764 4889999999999999999999887532211000         0000    


Q ss_pred             -------hh---------hccccccC------------CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          266 -------QT---------LTDSCLEG------------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       266 -------~~---------~~~~~~~~------------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                             ..         ........            .........+.+|+.+||..||.+|||+.++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~  313 (317)
T cd07867         243 FPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ  313 (317)
T ss_pred             CCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence                   00         00000000            001112356889999999999999999999986

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=2e-40  Score=299.12  Aligned_cols=249  Identities=18%  Similarity=0.266  Sum_probs=194.5

Q ss_pred             CCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ...|.+++.||.|++|.||+|... ++..||+|.+...... ....+.+|+++++.++|+||+++++++...+..++|||
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE   83 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence            356888899999999999999954 6889999998754322 23456789999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |+.+ +|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++.....    
T Consensus        84 ~~~~-~L~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~  160 (291)
T cd07844          84 YLDT-DLKQYMDD-CGGGLSMHNVRLFLFQLLRGLAYCHQR-RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTY  160 (291)
T ss_pred             cCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCHHHEEEcCCCCEEECccccccccCCCCccc
Confidence            9985 89998864 334789999999999999999999999 9999999999999999999999999998754321    


Q ss_pred             CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchh-HHHhhhhhhh-----------hc-------
Q 018244          210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNIQT-----------LT-------  269 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~-~~~~~~~~~~-----------~~-------  269 (359)
                      ....++..|+|||.+.+ ..++.++||||+|+++|+|++|..||..... ..........           ..       
T Consensus       161 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (291)
T cd07844         161 SNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKP  240 (291)
T ss_pred             cccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccc
Confidence            12245778999999875 4588899999999999999999988854421 1000000000           00       


Q ss_pred             -------cccccCCCChHHH--HHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          270 -------DSCLEGQFSSDEG--TELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       270 -------~~~~~~~~~~~~~--~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                             ....... .....  .++.+++.+||+.+|++|||+.+++.
T Consensus       241 ~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         241 YSFPFYPPRPLINH-APRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             ccccccCChhHHHh-CcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence                   0000000 00122  67889999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=1.1e-40  Score=301.12  Aligned_cols=252  Identities=17%  Similarity=0.219  Sum_probs=198.5

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCch--HHHHHHHHHHHhcCCCcccccccceeeeC--Ccce
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL  129 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~  129 (359)
                      +...|.+++.||.|+||.||+|... +++.+|+|.++......  ...+.+|+.++..++||||+++++++...  ...+
T Consensus         3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~   82 (293)
T cd07843           3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY   82 (293)
T ss_pred             chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence            3457888889999999999999964 58899999997554322  23567899999999999999999998877  8899


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +||||+++ +|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++......
T Consensus        83 lv~e~~~~-~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~  159 (293)
T cd07843          83 MVMEYVEH-DLKSLMET-MKQPFLQSEVKCLMLQLLSGVAHLHDN-WILHRDLKTSNLLLNNRGILKICDFGLAREYGSP  159 (293)
T ss_pred             EEehhcCc-CHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence            99999975 89888864 334689999999999999999999999 9999999999999999999999999998865443


Q ss_pred             ----CCcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhh-----------------
Q 018244          210 ----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT-----------------  267 (359)
Q Consensus       210 ----~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~-----------------  267 (359)
                          ....++..|+|||.+.+.. ++.++|+||||+++|+|++|..||...............                 
T Consensus       160 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (293)
T cd07843         160 LKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPG  239 (293)
T ss_pred             ccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccch
Confidence                2334678899999987654 688999999999999999999887644221111110000                 


Q ss_pred             --------hccccccCCCChH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          268 --------LTDSCLEGQFSSD-EGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       268 --------~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                              .........++.. .++.+.+++.+||+.||++|||+.+++..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         240 AKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             hcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence                    0000011112222 46789999999999999999999999863

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-41  Score=291.40  Aligned_cols=243  Identities=18%  Similarity=0.229  Sum_probs=208.4

Q ss_pred             CcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCch---HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      .++..++.||+|.||.|-.++ ...++.+|+|++++.....   ...-..|-++|+..+||.+..+...|+..+.+|+||
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM  247 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM  247 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence            456678888999999999998 5679999999998764332   334577999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC----CC
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS----RD  208 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~----~~  208 (359)
                      ||+.||.|.-.+.  ..+.+++.....+..+|+.||.|||++ +||+||+|.+|.|+|.+|++||+|||+++..    ..
T Consensus       248 eyanGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~-~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t  324 (516)
T KOG0690|consen  248 EYANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSR-NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDT  324 (516)
T ss_pred             EEccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhC-CeeeeechhhhheeccCCceEeeecccchhcccccce
Confidence            9999999998886  567799999999999999999999999 9999999999999999999999999998753    23


Q ss_pred             CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          209 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       209 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                      ....+||+.|+|||++....|..++|+|.+||++|||++|+-||+....+.+.+-+...      .-.+|...+++++.|
T Consensus       325 ~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e------d~kFPr~ls~eAktL  398 (516)
T KOG0690|consen  325 TKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME------DLKFPRTLSPEAKTL  398 (516)
T ss_pred             eccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh------hccCCccCCHHHHHH
Confidence            35788999999999999999999999999999999999999999876555444333221      124677888999999


Q ss_pred             HHHhcccCCCCCC-----CHHHHHH
Q 018244          289 ASRCLQYEPRERP-----NPRSLVT  308 (359)
Q Consensus       289 i~~cl~~dp~~Rp-----s~~~il~  308 (359)
                      +..+|.+||.+|.     .+.||.+
T Consensus       399 LsGLL~kdP~kRLGgGpdDakEi~~  423 (516)
T KOG0690|consen  399 LSGLLKKDPKKRLGGGPDDAKEIMR  423 (516)
T ss_pred             HHHHhhcChHhhcCCCchhHHHHHh
Confidence            9999999999995     4555543

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=3.6e-40  Score=294.60  Aligned_cols=249  Identities=20%  Similarity=0.286  Sum_probs=196.1

Q ss_pred             ccccccCCCCCCcEEEEEEeC----CCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeCC------
Q 018244           59 ENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD------  126 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------  126 (359)
                      |.+.+.||+|+||.||+|.+.    ++..||||++....  ....+.+.+|+++++.++||||+++++++....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            345677899999999999843    36789999997643  233556889999999999999999999886532      


Q ss_pred             cceEEEecCCCCCHhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCC
Q 018244          127 ERLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~  202 (359)
                      ..++++||+.+|+|.+++...    ....+++..+..++.|++.||+|||++ +++|+||||+||++++++.+||+|||+
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~nili~~~~~~kl~dfg~  159 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK-NFIHRDLAARNCMLNENMTVCVADFGL  159 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccchhhEEEcCCCCEEECcccc
Confidence            247889999999998877421    223578999999999999999999999 999999999999999999999999999


Q ss_pred             cccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccC
Q 018244          203 MKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEG  275 (359)
Q Consensus       203 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  275 (359)
                      ++......      ...++..|++||.+.+..++.++||||||+++|+|++ |..|+..............     ....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~  234 (273)
T cd05074         160 SKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIK-----GNRL  234 (273)
T ss_pred             cccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHc-----CCcC
Confidence            88654321      2234568999999988889999999999999999999 6766654432222111111     0111


Q ss_pred             CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      ..+...+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       235 ~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         235 KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            12234567899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-40  Score=293.90  Aligned_cols=242  Identities=17%  Similarity=0.161  Sum_probs=192.7

Q ss_pred             ccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCch---HHHHHHHHHHH-hcCCCcccccccceeeeCCcceEEEecCCC
Q 018244           63 SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---ARQFLEEARAV-GQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~e~~~l-~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  137 (359)
                      +.||.|+||.||+|.. .++..||+|.+.......   ...+..|..++ ...+|+|++++++++...+..++|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            4579999999999985 468899999987543211   22344454444 445899999999999999999999999999


Q ss_pred             CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCcCCCcc
Q 018244          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA  217 (359)
Q Consensus       138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~t~~  217 (359)
                      ++|.+++.  ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++..........++..
T Consensus        82 ~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  158 (260)
T cd05611          82 GDCASLIK--TLGGLPEDWAKQYIAEVVLGVEDLHQR-GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPD  158 (260)
T ss_pred             CCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcC
Confidence            99999986  345689999999999999999999999 999999999999999999999999999887665556678899


Q ss_pred             ccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCC
Q 018244          218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP  297 (359)
Q Consensus       218 y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp  297 (359)
                      |+|||.+.+..++.++||||||+++|+|++|..|+..................  .........+.++.+++.+||+.||
T Consensus       159 y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p  236 (260)
T cd05611         159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRIN--WPEEVKEFCSPEAVDLINRLLCMDP  236 (260)
T ss_pred             ccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC--CCCcccccCCHHHHHHHHHHccCCH
Confidence            99999998888899999999999999999999988655433322211111110  1111223456889999999999999


Q ss_pred             CCCCCHHHHHHH
Q 018244          298 RERPNPRSLVTA  309 (359)
Q Consensus       298 ~~Rps~~~il~~  309 (359)
                      ++|||+.++.+.
T Consensus       237 ~~R~~~~~~~~~  248 (260)
T cd05611         237 AKRLGANGYQEI  248 (260)
T ss_pred             HHccCCCcHHHH
Confidence            999977655443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-40  Score=299.34  Aligned_cols=248  Identities=20%  Similarity=0.280  Sum_probs=197.8

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .|++.+.||+|++|.||+|... +++.||+|.+....  ....+.+.+|+++++.++|+||+++++++..++..+++|||
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   81 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY   81 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence            4778888999999999999954 58899999987542  22346788999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----  210 (359)
                      ++++.+..+..  ....+++..+..++.|++.||.|||++ +++|+||+|+||++++++.++|+|||++.......    
T Consensus        82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~  158 (288)
T cd07833          82 VERTLLELLEA--SPGGLPPDAVRSYIWQLLQAIAYCHSH-NIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL  158 (288)
T ss_pred             CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc
Confidence            99876665553  345689999999999999999999999 99999999999999999999999999987755432    


Q ss_pred             -CcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh----------------------
Q 018244          211 -SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ----------------------  266 (359)
Q Consensus       211 -~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~----------------------  266 (359)
                       ...++..|+|||++.+. .++.++||||||+++|+|++|..|+..............                      
T Consensus       159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T cd07833         159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGV  238 (288)
T ss_pred             cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccc
Confidence             34567889999999888 789999999999999999999988764321110000000                      


Q ss_pred             hhccc----cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          267 TLTDS----CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       267 ~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                      .....    .....++...+.++.+|+.+||..+|++|||+++++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence            00000    0000122234788999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=2.4e-40  Score=299.65  Aligned_cols=248  Identities=21%  Similarity=0.192  Sum_probs=195.3

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc-----hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-----DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      |.+++.||.|++|.||+|.. .++..||+|.+......     ....+..|+++++.++|+||+++++++.+.+..++||
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF   81 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence            56677889999999999995 46889999999765432     2345678999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC--
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--  210 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~--  210 (359)
                      ||+ +++|.+++... ...+++..+..++.||+.||.|||++ +++|+||+|+||+++.++.++|+|||++.......  
T Consensus        82 e~~-~~~L~~~i~~~-~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~  158 (298)
T cd07841          82 EFM-ETDLEKVIKDK-SIVLTPADIKSYMLMTLRGLEYLHSN-WILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK  158 (298)
T ss_pred             ccc-CCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc
Confidence            999 88999999642 23699999999999999999999999 99999999999999999999999999988654432  


Q ss_pred             --CcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhh-----------------cc
Q 018244          211 --SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL-----------------TD  270 (359)
Q Consensus       211 --~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~-----------------~~  270 (359)
                        ...++..|+|||.+.+ ..++.++||||||+++|+|++|..+|................                 ..
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (298)
T cd07841         159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVE  238 (298)
T ss_pred             ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccc
Confidence              2345678999998865 457889999999999999999976665432111110000000                 00


Q ss_pred             ccccC-----CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          271 SCLEG-----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       271 ~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .....     ......+..+.+++.+||+.||++|||+.+++..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         239 FKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             ccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            00000     0112346789999999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=3.9e-40  Score=292.63  Aligned_cols=244  Identities=19%  Similarity=0.284  Sum_probs=204.2

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      +|++.+.||.|++|.||+|... +++.||+|.+..... .....+.+|+..+..++|+|++++++++......++||||+
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM   81 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence            4667788899999999999965 589999999987654 33567899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----  210 (359)
                      ++++|.+++..  ...+++..++.++.|++.||.|||+ . +++|+||+|+||+++.++.++|+|||.+.......    
T Consensus        82 ~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~-~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~  158 (264)
T cd06623          82 DGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKR-HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCN  158 (264)
T ss_pred             CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccC-CCccCCCCHHHEEECCCCCEEEccCccceecccCCCccc
Confidence            99999999963  3678999999999999999999999 8 99999999999999999999999999988654433    


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcch---hHHHhhhhhhhhccccccCCCChH-HHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNIQTLTDSCLEGQFSSD-EGTELV  286 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~  286 (359)
                      ...++..|+|||.+.+..++.++|+||||+++|+|++|..|+....   .......    +.... ....+.. .+..+.
T Consensus       159 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~l~  233 (264)
T cd06623         159 TFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQA----ICDGP-PPSLPAEEFSPEFR  233 (264)
T ss_pred             ceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHH----HhcCC-CCCCCcccCCHHHH
Confidence            2346789999999998889999999999999999999998875542   1111111    11111 1122333 678899


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHH
Q 018244          287 RLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +++.+||..+|++|||+.++++.
T Consensus       234 ~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         234 DFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             HHHHHHccCChhhCCCHHHHHhC
Confidence            99999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=2.3e-40  Score=296.77  Aligned_cols=241  Identities=18%  Similarity=0.247  Sum_probs=194.3

Q ss_pred             CCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCH
Q 018244           65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (359)
Q Consensus        65 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL  140 (359)
                      ||+|+||+||+|.. .+|..+|+|.+.....   .....+.+|+++++.++||||+++++++...+..++||||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            59999999999984 4688999999875321   2234567899999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---CCcCCCcc
Q 018244          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLA  217 (359)
Q Consensus       141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---~~~~~t~~  217 (359)
                      .+++.......+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++......   ....++..
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  159 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR-RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPG  159 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCC
Confidence            9999754545789999999999999999999999 9999999999999999999999999998765432   23456788


Q ss_pred             ccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCC
Q 018244          218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP  297 (359)
Q Consensus       218 y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp  297 (359)
                      |+|||.+.+..++.++||||||+++|+|++|+.||..................  .....+...++.+.+++.+||+.||
T Consensus       160 y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p  237 (277)
T cd05577         160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE--MAVEYPDKFSPEAKDLCEALLQKDP  237 (277)
T ss_pred             cCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc--ccccCCccCCHHHHHHHHHHccCCh
Confidence            99999998888999999999999999999999888654321111111111111  1122334567889999999999999


Q ss_pred             CCCC-----CHHHHHH
Q 018244          298 RERP-----NPRSLVT  308 (359)
Q Consensus       298 ~~Rp-----s~~~il~  308 (359)
                      ++||     ++.+++.
T Consensus       238 ~~R~~~~~~~~~~ll~  253 (277)
T cd05577         238 EKRLGCRGGSADEVRE  253 (277)
T ss_pred             hHccCCCcccHHHHHh
Confidence            9999     5665654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.4e-40  Score=294.74  Aligned_cols=243  Identities=18%  Similarity=0.247  Sum_probs=198.5

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC-CchHHHHHHHHHHHhcCC---CcccccccceeeeCCcceEEE
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~  132 (359)
                      .|.+++.||.|+||.||+|.. .++..+|+|.+.... ....+.+.+|+.+++.++   |||++++++++......++||
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            356778889999999999994 578899999987643 233567888999999996   999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC--
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--  210 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~--  210 (359)
                      ||+++++|.+++.   ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.......  
T Consensus        82 e~~~~~~L~~~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~  157 (277)
T cd06917          82 EYAEGGSVRTLMK---AGPIAEKYISVIIREVLVALKYIHKV-GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK  157 (277)
T ss_pred             ecCCCCcHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccc
Confidence            9999999999984   34789999999999999999999999 99999999999999999999999999987654332  


Q ss_pred             --CcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCCh-HHHHHHH
Q 018244          211 --SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS-DEGTELV  286 (359)
Q Consensus       211 --~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~  286 (359)
                        ...++..|+|||.+.++ .++.++|+||||+++|+|++|..|+............     ........+. ..+.++.
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  232 (277)
T cd06917         158 RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLI-----PKSKPPRLEDNGYSKLLR  232 (277)
T ss_pred             cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcc-----ccCCCCCCCcccCCHHHH
Confidence              34577889999998754 4788999999999999999999888654322111110     0001111112 2567899


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHH
Q 018244          287 RLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +++.+||+.||++||++.+++..
T Consensus       233 ~~i~~~l~~~p~~R~~~~~il~~  255 (277)
T cd06917         233 EFVAACLDEEPKERLSAEELLKS  255 (277)
T ss_pred             HHHHHHcCCCcccCcCHHHHhhC
Confidence            99999999999999999999864

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=4.3e-40  Score=297.01  Aligned_cols=248  Identities=15%  Similarity=0.121  Sum_probs=195.9

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-CCcccccccceeeeC-----Ccce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEG-----DERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-----~~~~  129 (359)
                      ..|.+++.||+|+||.||+|.. .+++.+|+|.+.... .....+.+|+.++..+ +|||++++++++...     ...+
T Consensus        22 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~  100 (291)
T cd06639          22 DTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLW  100 (291)
T ss_pred             CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeE
Confidence            4567778889999999999995 568899999987543 2245677899999999 799999999998754     3589


Q ss_pred             EEEecCCCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          130 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      +||||+++++|.+++...  ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++....
T Consensus       101 lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~  179 (291)
T cd06639         101 LVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN-RIIHRDVKGNNILLTTEGGVKLVDFGVSAQLT  179 (291)
T ss_pred             EEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEEcCCCCEEEeecccchhcc
Confidence            999999999999987531  345689999999999999999999999 99999999999999999999999999987644


Q ss_pred             CC----CCcCCCccccCcccccCC-----CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCC
Q 018244          208 DG----RSYSTNLAFTPPEYLRTG-----RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS  278 (359)
Q Consensus       208 ~~----~~~~~t~~y~aPE~~~~~-----~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (359)
                      ..    ....++..|+|||.+...     .++.++||||||+++|+|++|+.|+..............   ........+
T Consensus       180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~  256 (291)
T cd06639         180 STRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPR---NPPPTLLHP  256 (291)
T ss_pred             cccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhc---CCCCCCCcc
Confidence            32    234578899999998643     268899999999999999999988765422111111100   000011112


Q ss_pred             hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          279 SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ...+..+.+++.+||+.+|++|||+.+++++
T Consensus       257 ~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         257 EKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             cccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            3455679999999999999999999999864

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=5.7e-40  Score=289.00  Aligned_cols=247  Identities=18%  Similarity=0.246  Sum_probs=204.6

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      +|...+.||+|++|.||++... ++..+++|++..........+.+|++.++.++|+|++++++++......++++||++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            3567778899999999999964 688999999987665456788999999999999999999999999999999999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---CCcC
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYS  213 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---~~~~  213 (359)
                      +++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.+......   ....
T Consensus        81 ~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~-~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~  158 (253)
T cd05122          81 GGSLKDLLKS-TNQTLTESQIAYVCKELLKGLEYLHSN-GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMV  158 (253)
T ss_pred             CCcHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhcC-CEecCCCCHHHEEEccCCeEEEeecccccccccccccccee
Confidence            9999999864 225789999999999999999999998 9999999999999999999999999998876554   3456


Q ss_pred             CCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhc
Q 018244          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL  293 (359)
Q Consensus       214 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  293 (359)
                      ++..|+|||.+.+..++.++||||||+++|+|++|+.|+................. +  ........+..+.+++.+||
T Consensus       159 ~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~i~~~l  235 (253)
T cd05122         159 GTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGP-P--GLRNPEKWSDEFKDFLKKCL  235 (253)
T ss_pred             cCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCC-C--CcCcccccCHHHHHHHHHHc
Confidence            78899999999988899999999999999999999988765522211111111000 0  00111223678999999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 018244          294 QYEPRERPNPRSLVTA  309 (359)
Q Consensus       294 ~~dp~~Rps~~~il~~  309 (359)
                      +.||++|||+.+++..
T Consensus       236 ~~~p~~R~t~~~~l~~  251 (253)
T cd05122         236 QKNPEKRPTAEQLLKH  251 (253)
T ss_pred             cCChhhCCCHHHHhcC
Confidence            9999999999998863

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=3.5e-40  Score=296.24  Aligned_cols=246  Identities=18%  Similarity=0.242  Sum_probs=193.1

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC-chHHHHHHHHHH-HhcCCCcccccccceeeeCCcceEEEec
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARA-VGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      +|.+++.||+|+||.||+|.. .+|..||+|.+..... .....+..|+.. ++.++||||+++++++......+++|||
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~   81 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV   81 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence            567888899999999999995 4689999999976532 223455566665 6667899999999999999999999999


Q ss_pred             CCCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC--
Q 018244          135 MPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~--  210 (359)
                      ++ |+|.+++...  ....+++..++.++.|++.||+|||++.+++|+||||+||+++.++.+||+|||++.......  
T Consensus        82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~  160 (283)
T cd06617          82 MD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAK  160 (283)
T ss_pred             hc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence            97 5888877542  335789999999999999999999985489999999999999999999999999987654322  


Q ss_pred             -CcCCCccccCcccccC----CCCCCccchhhHHHHHHHHHhCCCCCCcchh--HHHhhhhhhhhccccccCCCChHHHH
Q 018244          211 -SYSTNLAFTPPEYLRT----GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL--DLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       211 -~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~il~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                       ...++..|+|||.+.+    ..++.++|+||||+++|+|++|..|+.....  ....     ...............+.
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~  235 (283)
T cd06617         161 TIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLK-----QVVEEPSPQLPAEKFSP  235 (283)
T ss_pred             ccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHH-----HHHhcCCCCCCccccCH
Confidence             2457889999998865    3468899999999999999999988753211  1111     11111111111123567


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ++.+++.+||..+|++|||+.+++..
T Consensus       236 ~l~~li~~~l~~~p~~Rp~~~~il~~  261 (283)
T cd06617         236 EFQDFVNKCLKKNYKERPNYPELLQH  261 (283)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcC
Confidence            89999999999999999999999874

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=4.1e-40  Score=292.55  Aligned_cols=239  Identities=16%  Similarity=0.189  Sum_probs=196.7

Q ss_pred             CCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCH
Q 018244           65 HGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (359)
Q Consensus        65 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL  140 (359)
                      ||.|++|.||+|+.. ++..+|+|.+.....   ...+.+.+|+++++.++||||+++++++.++...++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            599999999999954 588999999975432   2345688999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---CCcCCCcc
Q 018244          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLA  217 (359)
Q Consensus       141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---~~~~~t~~  217 (359)
                      .+++..  ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++......   ....++..
T Consensus        81 ~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~-~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~  157 (262)
T cd05572          81 WTILRD--RGLFDEYTARFYIACVVLAFEYLHNR-GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE  157 (262)
T ss_pred             HHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcC
Confidence            999963  34689999999999999999999998 9999999999999999999999999998876543   23457889


Q ss_pred             ccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCC
Q 018244          218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP  297 (359)
Q Consensus       218 y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp  297 (359)
                      |+|||.+.+..++.++|+||||+++|+|++|..|+.....+...  .............++...+.++.+++.+||+.||
T Consensus       158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  235 (262)
T cd05572         158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPME--IYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNP  235 (262)
T ss_pred             ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHH--HHHHHhccCCCCCCCcccCHHHHHHHHHHccCCh
Confidence            99999998888999999999999999999999988655311111  1111111112223444457889999999999999


Q ss_pred             CCCCC-----HHHHHH
Q 018244          298 RERPN-----PRSLVT  308 (359)
Q Consensus       298 ~~Rps-----~~~il~  308 (359)
                      ++||+     ++++++
T Consensus       236 ~~R~~~~~~~~~~l~~  251 (262)
T cd05572         236 EERLGNLKGGIKDIKK  251 (262)
T ss_pred             hhCcCCcccCHHHHhc
Confidence            99999     677665

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=4.2e-40  Score=297.26  Aligned_cols=241  Identities=17%  Similarity=0.222  Sum_probs=197.8

Q ss_pred             cccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCH
Q 018244           62 VSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL  140 (359)
                      ...||+|+||.||++.. .++..||+|.+..........+.+|+.+++.++|+|++++++++...+..+++|||+++++|
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  104 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL  104 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence            34569999999999985 57889999998765544566789999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CCcCCCc
Q 018244          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNL  216 (359)
Q Consensus       141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~~~~t~  216 (359)
                      .+++.   ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++......    ....++.
T Consensus       105 ~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~-givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  180 (292)
T cd06657         105 TDIVT---HTRMNEEQIAAVCLAVLKALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTP  180 (292)
T ss_pred             HHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCc
Confidence            99873   34689999999999999999999999 9999999999999999999999999987654332    2345788


Q ss_pred             cccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccC
Q 018244          217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE  296 (359)
Q Consensus       217 ~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  296 (359)
                      .|+|||.+.+..++.++|+||+|+++|+|++|..|+.............. ......  ......+..+.+++.+||+.|
T Consensus       181 ~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~l~~li~~~l~~~  257 (292)
T cd06657         181 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-NLPPKL--KNLHKVSPSLKGFLDRLLVRD  257 (292)
T ss_pred             cccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-hCCccc--CCcccCCHHHHHHHHHHHhCC
Confidence            99999999888889999999999999999999998765432222111111 111110  012335667999999999999


Q ss_pred             CCCCCCHHHHHHH
Q 018244          297 PRERPNPRSLVTA  309 (359)
Q Consensus       297 p~~Rps~~~il~~  309 (359)
                      |.+||++.+++.+
T Consensus       258 P~~R~~~~~ll~~  270 (292)
T cd06657         258 PAQRATAAELLKH  270 (292)
T ss_pred             cccCcCHHHHhcC
Confidence            9999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-41  Score=285.52  Aligned_cols=259  Identities=17%  Similarity=0.128  Sum_probs=205.1

Q ss_pred             ccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-Ccccccccceeee----CCcceEEEecCC
Q 018244           63 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCE----GDERLLVAEYMP  136 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~----~~~~~lv~e~~~  136 (359)
                      +.||-|-.|.|-.+. ..+|+.+|+|++...     .+.++|+++.-... |||||.++++|..    ...+.+|||.++
T Consensus        68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~me  142 (400)
T KOG0604|consen   68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECME  142 (400)
T ss_pred             hhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeeccc
Confidence            457999999999998 557899999998743     45678999887774 9999999998864    346789999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC---CCCeEEeccCCcccCCCCC---
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDGR---  210 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~---~~~~kl~DFg~a~~~~~~~---  210 (359)
                      ||.|++.+.++....+++.++..|+.||+.|+.|||+. +|.||||||+|+|...   |..+||+|||+|+......   
T Consensus       143 GGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~-nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~  221 (400)
T KOG0604|consen  143 GGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM-NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLM  221 (400)
T ss_pred             chHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc-chhhccCChhheeeecCCCCcceEecccccccccCCCcccc
Confidence            99999999988888999999999999999999999999 9999999999999964   5679999999999876433   


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccc--ccCCCChHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC--LEGQFSSDEGTELVRL  288 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l  288 (359)
                      +..-|+.|.|||++...+|+..+|+||+||++|-|++|.+||+...-..+..+-...+....  ......+..+++++++
T Consensus       222 TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdl  301 (400)
T KOG0604|consen  222 TPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDL  301 (400)
T ss_pred             CCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHH
Confidence            34458999999999999999999999999999999999999976532222111111111111  1112235678999999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHHHhhhcccCCccccchhH
Q 018244          289 ASRCLQYEPRERPNPRSLVTALVTLQKDTEVSCFLFSSQF  328 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~~~~~~~~~  328 (359)
                      |+.+|+.+|.+|.|+.+++++--- .....++..+...+.
T Consensus       302 IR~LLkt~PteRlTI~~~m~hpwi-~~~~~vp~tpl~t~~  340 (400)
T KOG0604|consen  302 IRKLLKTEPTERLTIEEVMDHPWI-NQYEAVPQTPLSTSR  340 (400)
T ss_pred             HHHHhcCCchhheeHHHhhcCchh-cccccCCCCCchhhh
Confidence            999999999999999999876322 223344444444333

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=8.5e-40  Score=297.55  Aligned_cols=248  Identities=19%  Similarity=0.207  Sum_probs=200.4

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ..|..++.||.|+||.||+|.. .++..+|+|.+.....   .....+.+|+++++.++|+|++++.+++......++||
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   94 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence            3466777889999999999995 4678899999864321   23456788999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCc
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY  212 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~  212 (359)
                      ||+. |+|.+.+.. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.........
T Consensus        95 e~~~-~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~  171 (308)
T cd06634          95 EYCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF  171 (308)
T ss_pred             EccC-CCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHhEEECCCCcEEECCcccceeecCcccc
Confidence            9996 578877653 345689999999999999999999999 9999999999999999999999999999877766667


Q ss_pred             CCCccccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          213 STNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       213 ~~t~~y~aPE~~~---~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      .++..|+|||.+.   ...++.++||||||+++|+|++|..|+...............    ..........+..+.+++
T Consensus       172 ~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li  247 (308)
T cd06634         172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQSGHWSEYFRNFV  247 (308)
T ss_pred             cCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhc----CCCCcCcccccHHHHHHH
Confidence            7889999999875   345788999999999999999999887654222111111111    011111234667899999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHH
Q 018244          290 SRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~L~  311 (359)
                      .+||+.+|++||++.+++....
T Consensus       248 ~~cl~~~P~~Rp~~~~ll~~~~  269 (308)
T cd06634         248 DSCLQKIPQDRPTSEVLLKHRF  269 (308)
T ss_pred             HHHhhCCcccCCCHHHHhhCcc
Confidence            9999999999999999997643

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=7.4e-40  Score=300.56  Aligned_cols=243  Identities=17%  Similarity=0.201  Sum_probs=190.1

Q ss_pred             CCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCHhh
Q 018244           66 GEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK  142 (359)
Q Consensus        66 g~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~  142 (359)
                      |.|+||+||+|.. .+++.||+|.+......  ..+.+.+|+.+++.++||||+++++++..++..++|+||+.+++|.+
T Consensus         9 g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~   88 (328)
T cd08226           9 GFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANS   88 (328)
T ss_pred             cccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHH
Confidence            4449999999985 57899999998754322  24568899999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-----------CC
Q 018244          143 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----------RS  211 (359)
Q Consensus       143 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-----------~~  211 (359)
                      ++.......+++..+..++.|++.||+|||++ +++||||||+||+++.++.++++||+.+......           ..
T Consensus        89 ~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (328)
T cd08226          89 LLKTYFPEGMSEALIGNILFGALRGLNYLHQN-GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQF  167 (328)
T ss_pred             HHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccccccc
Confidence            98764455689999999999999999999999 9999999999999999999999999754322110           11


Q ss_pred             cCCCccccCcccccCC--CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh-----------------------
Q 018244          212 YSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-----------------------  266 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~--~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~-----------------------  266 (359)
                      ..++..|+|||++.+.  .++.++||||||+++|+|++|..||..............                       
T Consensus       168 ~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (328)
T cd08226         168 STSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQ  247 (328)
T ss_pred             ccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccch
Confidence            2235679999999764  478899999999999999999998865432111100000                       


Q ss_pred             ------------------hhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          267 ------------------TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       267 ------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                        ...............+..+.+|+.+||..||++|||+.+++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~  308 (328)
T cd08226         248 SGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH  308 (328)
T ss_pred             hhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence                              0000001111123467789999999999999999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=7.3e-40  Score=295.52  Aligned_cols=249  Identities=18%  Similarity=0.204  Sum_probs=192.6

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCch-HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ..|.+++.||+|+||.||+|.. .++..||+|.+....... ...+.+|+++++.++|+||+++++++..+...++||||
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEY   84 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEec
Confidence            4577888999999999999984 568899999997543222 34577899999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----C
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~  210 (359)
                      +. ++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++.....    .
T Consensus        85 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  161 (291)
T cd07870          85 MH-TDLAQYMIQ-HPGGLHPYNVRLFMFQLLRGLAYIHGQ-HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYS  161 (291)
T ss_pred             cc-CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCC
Confidence            96 577777653 334678888999999999999999999 9999999999999999999999999998754322    2


Q ss_pred             CcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh----------------------h
Q 018244          211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ----------------------T  267 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~----------------------~  267 (359)
                      ...++..|+|||.+.+. .++.++||||||+++|+|++|..||.........-....                      .
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (291)
T cd07870         162 SEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPE  241 (291)
T ss_pred             CccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccch
Confidence            33467899999998754 478899999999999999999988754321100000000                      0


Q ss_pred             hccccccCCC-----ChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          268 LTDSCLEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       268 ~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                      ..........     ....+..+.+++.+|+..||.+|||+.+++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         242 WFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             hccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence            0000000000     0012467899999999999999999999875

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.7e-40  Score=320.22  Aligned_cols=252  Identities=16%  Similarity=0.180  Sum_probs=184.6

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCC--CcEEEEEEeC--------------C---CCCchHHHHHHHHHHHhcCCCcccc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLEN--QFRIAVKRFN--------------R---SAWPDARQFLEEARAVGQLRNRRLA  116 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~--------------~---~~~~~~~~~~~e~~~l~~l~h~niv  116 (359)
                      ...|++++.||+|+||+||+|..+.  +...++|.+.              +   ........+.+|+.+|+.++|+||+
T Consensus       147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv  226 (501)
T PHA03210        147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL  226 (501)
T ss_pred             hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence            3578999999999999999987432  2222222111              0   1112234578999999999999999


Q ss_pred             cccceeeeCCcceEEEecCCCCCHhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC
Q 018244          117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV  193 (359)
Q Consensus       117 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~  193 (359)
                      ++++++...+..++|+|++.+ +|.+++....   ........+..++.||+.||.|||++ +|+||||||+|||++.++
T Consensus       227 ~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~-gIiHrDLKP~NILl~~~~  304 (501)
T PHA03210        227 KIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK-KLIHRDIKLENIFLNCDG  304 (501)
T ss_pred             cEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCC
Confidence            999999999999999999854 7777764321   12234567788999999999999999 999999999999999999


Q ss_pred             CeEEeccCCcccCCCCC-----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchh----HHHhhhh
Q 018244          194 NPRLSCFGLMKNSRDGR-----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRDRN  264 (359)
Q Consensus       194 ~~kl~DFg~a~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~----~~~~~~~  264 (359)
                      .+||+|||+++......     ...||..|+|||++.+..++.++|||||||++|||++|..++.....    .......
T Consensus       305 ~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~  384 (501)
T PHA03210        305 KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKII  384 (501)
T ss_pred             CEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHH
Confidence            99999999998654332     34689999999999998999999999999999999999865432211    1110000


Q ss_pred             ----------------hhhhcccc-c---cCCC-----ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          265 ----------------IQTLTDSC-L---EGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       265 ----------------~~~~~~~~-~---~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                      ....+... .   ....     ....+.++.+++.+||+.||.+|||+.|++.+
T Consensus       385 ~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h  454 (501)
T PHA03210        385 DSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL  454 (501)
T ss_pred             HhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence                            00000000 0   0000     01134567888999999999999999999875

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-41  Score=319.97  Aligned_cols=252  Identities=21%  Similarity=0.313  Sum_probs=214.3

Q ss_pred             cccccCCCCCCcEEEEEEeC----CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           60 NIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        60 ~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .+-+.||.|.||.|++|.++    ....||||.++....+ ...+|+.|..+|.+++||||+++.|+......+.||+||
T Consensus       632 ~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEy  711 (996)
T KOG0196|consen  632 KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEY  711 (996)
T ss_pred             EEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhh
Confidence            45566799999999999864    2467999999976543 356799999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCC-cC
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-YS  213 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~-~~  213 (359)
                      |++|+|..+|+.++ +.+++.++.-+++.|+.|+.||-+. +.|||||.+.|||++.+...|++|||+++...++.. ..
T Consensus       712 MENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm-~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~y  789 (996)
T KOG0196|consen  712 MENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAY  789 (996)
T ss_pred             hhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhc-CchhhhhhhhheeeccceEEEeccccceeecccCCCccc
Confidence            99999999998755 4599999999999999999999999 999999999999999999999999999998765541 11


Q ss_pred             C------CccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          214 T------NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       214 ~------t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                      .      ..+|+|||.+..++++.++||||||++|||.++ |..|+.+.......+.     +....+...|.+++..|.
T Consensus       790 tt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIka-----Ie~gyRLPpPmDCP~aL~  864 (996)
T KOG0196|consen  790 TTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA-----IEQGYRLPPPMDCPAALY  864 (996)
T ss_pred             cccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHH-----HHhccCCCCCCCCcHHHH
Confidence            1      268999999999999999999999999999876 6666655443333322     233344455788999999


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          287 RLASRCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      +||..||++|-.+||.+.+|+..|.++.....
T Consensus       865 qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~  896 (996)
T KOG0196|consen  865 QLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPN  896 (996)
T ss_pred             HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCch
Confidence            99999999999999999999999999877544

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=7.6e-40  Score=294.11  Aligned_cols=249  Identities=18%  Similarity=0.228  Sum_probs=195.8

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      |++++.||.|++|.||+|.. .+|..||+|++.....  .....+.+|++.++.++|+|++++++++..++..+++|||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            45677889999999999985 4789999999875432  22356788999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CC
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~  211 (359)
                      + ++|.+++.......+++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++......    ..
T Consensus        81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~-~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~  158 (283)
T cd07835          81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH-RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH  158 (283)
T ss_pred             C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCc
Confidence            5 5899988654445789999999999999999999999 9999999999999999999999999998764322    12


Q ss_pred             cCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhh-----------------hc---c
Q 018244          212 YSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT-----------------LT---D  270 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~-----------------~~---~  270 (359)
                      ..++..|+|||++.+. .++.++||||||+++|+|++|..||...............                 ..   .
T Consensus       159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd07835         159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFP  238 (283)
T ss_pred             cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcc
Confidence            3457889999988764 4788999999999999999999887644221110000000                 00   0


Q ss_pred             c---cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          271 S---CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       271 ~---~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .   ..........+..+.+++.+||+.||++|||++++++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  280 (283)
T cd07835         239 KWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH  280 (283)
T ss_pred             cccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            0   00001122345789999999999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.9e-41  Score=311.63  Aligned_cols=240  Identities=16%  Similarity=0.207  Sum_probs=195.4

Q ss_pred             ccCCCCCCcEEEEEEe-CCCcEEEEEEeCCC----CCchHHHHHHHHHHHhcCCCcccccccceeeeCCc--ceEEEecC
Q 018244           63 SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS----AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE--RLLVAEYM  135 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~~  135 (359)
                      ..||+|+|-+||+|.. .+|..||.-.++..    .....+.|..|+.+|+.|+|+||++++.+|.+..+  ..+|+|.+
T Consensus        46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~  125 (632)
T KOG0584|consen   46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF  125 (632)
T ss_pred             hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence            3479999999999985 45777875555432    22335789999999999999999999999988766  78899999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCcccccCCCCCeeeCC-CCCeEEeccCCcccCCCC--CC
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-ERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRDG--RS  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~ivH~Dikp~NIll~~-~~~~kl~DFg~a~~~~~~--~~  211 (359)
                      ..|+|..|++  +.+.++...+..|++||+.||.|||++ +.|+|||||.+||+|+. .|.|||+|+|+|......  ..
T Consensus       126 TSGtLr~Y~k--k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aks  203 (632)
T KOG0584|consen  126 TSGTLREYRK--KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKS  203 (632)
T ss_pred             cCCcHHHHHH--HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccce
Confidence            9999999998  556788999999999999999999987 67999999999999985 589999999999876654  45


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ..|||.|||||+.. ..|++.+|||||||.++||+|+..|+...........   .+.....+..+..--.++++++|.+
T Consensus       204 vIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYK---KV~SGiKP~sl~kV~dPevr~fIek  279 (632)
T KOG0584|consen  204 VIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYK---KVTSGIKPAALSKVKDPEVREFIEK  279 (632)
T ss_pred             eccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHH---HHHcCCCHHHhhccCCHHHHHHHHH
Confidence            68999999999988 8899999999999999999999988876543322111   1111111111222234689999999


Q ss_pred             hcccCCCCCCCHHHHHHH
Q 018244          292 CLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~  309 (359)
                      ||.. .++|||+.|+|..
T Consensus       280 Cl~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  280 CLAT-KSERLSAKELLKD  296 (632)
T ss_pred             HhcC-chhccCHHHHhhC
Confidence            9999 9999999999975

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=6.3e-40  Score=294.25  Aligned_cols=239  Identities=18%  Similarity=0.186  Sum_probs=187.3

Q ss_pred             CCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc---hHHHHHHHHHH---HhcCCCcccccccceeeeCCcceEEEecCCC
Q 018244           65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARA---VGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (359)
Q Consensus        65 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~---l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  137 (359)
                      ||+|+||.||++.. .++..+|+|.+......   ....+.+|..+   +....|+||+.+.+++...+..++||||+++
T Consensus         2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (279)
T cd05633           2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNG   81 (279)
T ss_pred             cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCC
Confidence            69999999999995 46889999998754321   12223444433   3344799999999999999999999999999


Q ss_pred             CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--CCcCCC
Q 018244          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYSTN  215 (359)
Q Consensus       138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--~~~~~t  215 (359)
                      ++|.+++.  ....+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++......  ....++
T Consensus        82 ~~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  158 (279)
T cd05633          82 GDLHYHLS--QHGVFSEKEMRFYATEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT  158 (279)
T ss_pred             CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCC
Confidence            99999886  345699999999999999999999999 9999999999999999999999999998754332  234678


Q ss_pred             ccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcc
Q 018244          216 LAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ  294 (359)
Q Consensus       216 ~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  294 (359)
                      ..|+|||.+.+ ..++.++||||+|+++|+|++|..||..........  ..... .......+...+.++.+++.+||+
T Consensus       159 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~li~~~l~  235 (279)
T cd05633         159 HGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRMT-LTVNVELPDSFSPELKSLLEGLLQ  235 (279)
T ss_pred             cCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH--HHHHh-hcCCcCCccccCHHHHHHHHHHhc
Confidence            99999999874 458899999999999999999999886432111110  00000 011122344567889999999999


Q ss_pred             cCCCCCC-----CHHHHHHH
Q 018244          295 YEPRERP-----NPRSLVTA  309 (359)
Q Consensus       295 ~dp~~Rp-----s~~~il~~  309 (359)
                      .||++||     |+++++++
T Consensus       236 ~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         236 RDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             CCHHHhcCCCCCCHHHHHhC
Confidence            9999999     58888764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=9.4e-40  Score=293.20  Aligned_cols=247  Identities=18%  Similarity=0.210  Sum_probs=192.0

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCC-CcccccccceeeeC--CcceEEEe
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLR-NRRLANLLGCCCEG--DERLLVAE  133 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~--~~~~lv~e  133 (359)
                      |++++.||+|+||.||+|.. .++..||+|.+..... .......+|+..+.++. |+|++++++++.+.  +..++|||
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            56778899999999999984 5688999999875422 22234567899999985 99999999999887  88999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---C
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---R  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---~  210 (359)
                      |+.+ +|.+.+.. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++. +.+||+|||++......   .
T Consensus        81 ~~~~-~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~  156 (282)
T cd07831          81 LMDM-NLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRN-GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT  156 (282)
T ss_pred             cCCc-cHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CceecccCHHHEEEcC-CCeEEEecccccccccCCCcC
Confidence            9974 88888764 235789999999999999999999999 9999999999999999 99999999998765433   2


Q ss_pred             CcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhh----------hccc--cccCCC
Q 018244          211 SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT----------LTDS--CLEGQF  277 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~----------~~~~--~~~~~~  277 (359)
                      ...++..|+|||.+.. ..++.++|||||||++|+|++|..||...............          ....  .....+
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (282)
T cd07831         157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF  236 (282)
T ss_pred             CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence            3456889999997654 45788999999999999999999888654321111000000          0000  000000


Q ss_pred             -----------ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          278 -----------SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       278 -----------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                 ....+.++.+++.+||+.+|++|||++++++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  279 (282)
T cd07831         237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH  279 (282)
T ss_pred             cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence                       12356889999999999999999999999864

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=7.6e-40  Score=295.82  Aligned_cols=251  Identities=19%  Similarity=0.219  Sum_probs=195.8

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ..|++.+.||.|++|.||+|... +++.||+|.+.....  ...+.+.+|+++++.++|+||+++++++......++|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            46788899999999999999954 688999999875432  223567889999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC-CCCeEEeccCCcccCCCC---
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~-~~~~kl~DFg~a~~~~~~---  209 (359)
                      |+++ +|.+++.......+++..+..++.||+.||+|||++ +++|+||+|+||+++. ++.+||+|||++......   
T Consensus        82 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~  159 (294)
T PLN00009         82 YLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH-RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT  159 (294)
T ss_pred             cccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCcceEEEECCCCEEEEcccccccccCCCccc
Confidence            9964 788887654444578899999999999999999999 9999999999999985 567999999998764322   


Q ss_pred             -CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccc----------------
Q 018244          210 -RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS----------------  271 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~----------------  271 (359)
                       ....+++.|+|||.+.+. .++.++||||||+++|+|+||..||..................+                
T Consensus       160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (294)
T PLN00009        160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKS  239 (294)
T ss_pred             cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhh
Confidence             233567899999988764 57889999999999999999998886442211111100000000                


Q ss_pred             ---cccC----CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          272 ---CLEG----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       272 ---~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                         ....    ......+.++.+++.+||+.+|++||++.++++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~  284 (294)
T PLN00009        240 AFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH  284 (294)
T ss_pred             hcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence               0000    0112346779999999999999999999999864

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=1e-39  Score=302.69  Aligned_cols=247  Identities=15%  Similarity=0.194  Sum_probs=194.9

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeC------Cc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DE  127 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~  127 (359)
                      ..|.+++.||+|+||.||+|.. .++..||+|.+....  ......+.+|+.+++.++|+||+++++++...      ..
T Consensus        16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   95 (353)
T cd07850          16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQD   95 (353)
T ss_pred             cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCc
Confidence            5677888899999999999994 578899999987532  23345678899999999999999999988643      35


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      .++||||+.+ +|.+.+..    .+++..+..++.|++.||+|||++ |++|+||||+||+++.++.+||+|||++....
T Consensus        96 ~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~-gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~  169 (353)
T cd07850          96 VYLVMELMDA-NLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  169 (353)
T ss_pred             EEEEEeccCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence            7999999965 88888742    289999999999999999999999 99999999999999999999999999998654


Q ss_pred             CCC---CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh------------------
Q 018244          208 DGR---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ------------------  266 (359)
Q Consensus       208 ~~~---~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~------------------  266 (359)
                      ...   ...++..|+|||.+.+..++.++||||||+++|+|++|+.||..............                  
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (353)
T cd07850         170 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVR  249 (353)
T ss_pred             CCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhh
Confidence            432   34567899999999988899999999999999999999988865421110000000                  


Q ss_pred             hhc---------------ccccc----CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          267 TLT---------------DSCLE----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       267 ~~~---------------~~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ...               .....    .......+..+.+++.+||+.||++|||+.++++.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         250 NYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             HHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            000               00000    00012346678999999999999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.6e-40  Score=306.23  Aligned_cols=249  Identities=19%  Similarity=0.280  Sum_probs=215.3

Q ss_pred             HhcCCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCch--HHHHHHHHHHHhcCCCcccccccceeeeCCcc
Q 018244           52 ATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (359)
Q Consensus        52 ~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  128 (359)
                      ..+.+..|.+++.||+|.|++|.+|+ ..++..||||.+.+.....  ...+.+|+++|+.|.|||||+++.+......+
T Consensus        51 ~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~l  130 (596)
T KOG0586|consen   51 DSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATL  130 (596)
T ss_pred             ccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeeccee
Confidence            34566778999999999999999998 4568899999998875433  45689999999999999999999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      |+||||+.+|.+++++.  +.+.+.+..+..++.|+..|++|||++ +|+|||||++||||+.+.++||+|||++..+..
T Consensus       131 ylV~eya~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k-~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~  207 (596)
T KOG0586|consen  131 YLVMEYASGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSK-NIVHRDLKAENILLDENMNIKIADFGFSTFFDY  207 (596)
T ss_pred             EEEEEeccCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhc-ceeccccchhhcccccccceeeeccccceeecc
Confidence            99999999999999997  555677789999999999999999999 999999999999999999999999999998775


Q ss_pred             C---CCcCCCccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHH
Q 018244          209 G---RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE  284 (359)
Q Consensus       209 ~---~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (359)
                      +   .+..|++.|.|||++.+..| .+.+|+||+|+++|-|+.|.-||.+..........+...      -..+...+.+
T Consensus       208 ~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk------~rIp~~ms~d  281 (596)
T KOG0586|consen  208 GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGK------YRIPFYMSCD  281 (596)
T ss_pred             cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeee------ecccceeech
Confidence            4   46789999999999998876 468999999999999999999998776554443332211      1234556788


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          285 LVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       285 l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.++|+++|-.+|.+|++++++...
T Consensus       282 ce~lLrk~lvl~Pskr~~~dqim~~  306 (596)
T KOG0586|consen  282 CEDLLRKFLVLNPSKRGPCDQIMKD  306 (596)
T ss_pred             hHHHHHHhhccCccccCCHHHhhhh
Confidence            9999999999999999999998764

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=2.5e-39  Score=295.07  Aligned_cols=244  Identities=19%  Similarity=0.214  Sum_probs=197.4

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      |..+++||+|+||+||+|+. .++..||+|.+.....   .....+.+|+++++.++|+|++++++++.+....++||||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            44556689999999999985 4688999999875432   2235678899999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCcCC
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST  214 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~  214 (359)
                      +.+ +|.+++.. ....+++..+..++.|++.||.|||++ +++|+||+|+||++++++.++|+|||++..........+
T Consensus       103 ~~~-~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~  179 (313)
T cd06633         103 CLG-SASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVG  179 (313)
T ss_pred             CCC-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccc
Confidence            964 78777754 345689999999999999999999999 999999999999999999999999999877666666678


Q ss_pred             CccccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          215 NLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       215 t~~y~aPE~~~---~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      +..|+|||++.   ...++.++||||||+++|+|++|..|+................    .........+..+.+++.+
T Consensus       180 ~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~  255 (313)
T cd06633         180 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND----SPTLQSNEWTDSFRGFVDY  255 (313)
T ss_pred             cccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC----CCCCCccccCHHHHHHHHH
Confidence            88999999985   3558889999999999999999998876543211111111110    1111123345679999999


Q ss_pred             hcccCCCCCCCHHHHHHH
Q 018244          292 CLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~  309 (359)
                      ||+.+|++||++.+++.+
T Consensus       256 ~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         256 CLQKIPQERPASAELLRH  273 (313)
T ss_pred             HccCChhhCcCHHHHhcC
Confidence            999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=1.4e-39  Score=287.60  Aligned_cols=245  Identities=20%  Similarity=0.246  Sum_probs=205.7

Q ss_pred             ccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      |.+.+.||.|++|.||++... ++..+|+|++.....  .....+.+|+++++.++|+|++++.+.+......++|+||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~   81 (258)
T cd08215           2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA   81 (258)
T ss_pred             ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence            667788899999999999954 688999999986543  34567889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC---
Q 018244          136 PNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~---  210 (359)
                      ++++|.+++....  ...+++..+..++.+++.||.|||+. +++|+||+|+||++++++.++|+|||++.......   
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~-~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~  160 (258)
T cd08215          82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR-KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA  160 (258)
T ss_pred             CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence            9999999987532  46799999999999999999999999 99999999999999999999999999987655442   


Q ss_pred             -CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       211 -~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                       ...+++.|+|||.+.+..++.++|+||+|+++|+|++|..|+................     ....+...+.++.+++
T Consensus       161 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i  235 (258)
T cd08215         161 KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ-----YPPIPSQYSSELRNLV  235 (258)
T ss_pred             cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC-----CCCCCCCCCHHHHHHH
Confidence             3356788999999988889999999999999999999998876553332222221111     1223345667899999


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 018244          290 SRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+||..+|++|||+.++++.
T Consensus       236 ~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         236 SSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             HHHcCCChhhCcCHHHHhcC
Confidence            99999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=1.7e-39  Score=287.07  Aligned_cols=245  Identities=18%  Similarity=0.225  Sum_probs=203.5

Q ss_pred             ccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeC--CcceEEEe
Q 018244           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLVAE  133 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e  133 (359)
                      |.+.+.||+|++|.||+|... ++..|++|++.....  ...+.+.+|++.+++++|+||+++++.+...  ...++++|
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   81 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE   81 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence            456677899999999999965 688999999976543  3356788999999999999999999999888  88999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC---
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~---  210 (359)
                      |+++++|.+++..  ...+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+.......   
T Consensus        82 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~-~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~  158 (260)
T cd06606          82 YVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSN-GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGE  158 (260)
T ss_pred             ecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEcCCCCEEEcccccEEecccccccc
Confidence            9999999999864  33899999999999999999999998 99999999999999999999999999988765443   


Q ss_pred             ---CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          211 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       211 ---~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                         ...++..|+|||.+.+...+.++||||||+++|+|++|..|+........   ..............+...+..+.+
T Consensus       159 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~  235 (260)
T cd06606         159 GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA---ALYKIGSSGEPPEIPEHLSEEAKD  235 (260)
T ss_pred             cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH---HHHhccccCCCcCCCcccCHHHHH
Confidence               34567899999999988899999999999999999999988765431111   111111111222344556789999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ++.+||..||++||++.+++.+
T Consensus       236 ~i~~~l~~~p~~Rp~~~~ll~~  257 (260)
T cd06606         236 FLRKCLRRDPKKRPTADELLQH  257 (260)
T ss_pred             HHHHhCcCChhhCCCHHHHhhC
Confidence            9999999999999999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-39  Score=285.80  Aligned_cols=242  Identities=19%  Similarity=0.257  Sum_probs=203.0

Q ss_pred             ccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      |.+.+.||.|++|.||++... ++..+|+|.+.....  .....+.+|++++..++|+|++++++++......+++|||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA   81 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence            567788899999999999854 678999999987654  34567899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCC----
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS----  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~----  211 (359)
                      ++++|.+++..  ...+++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++........    
T Consensus        82 ~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  158 (254)
T cd06627          82 ENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQ-GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDAS  158 (254)
T ss_pred             CCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccc
Confidence            99999999863  36789999999999999999999999 999999999999999999999999999887654432    


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ..++..|+|||...+..++.++||||+|+++|+|++|..|+.............     .......+...+..+.+++.+
T Consensus       159 ~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~  233 (254)
T cd06627         159 VVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV-----QDDHPPLPEGISPELKDFLMQ  233 (254)
T ss_pred             cccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh-----ccCCCCCCCCCCHHHHHHHHH
Confidence            457889999999987778899999999999999999998876433111111111     111223345567889999999


Q ss_pred             hcccCCCCCCCHHHHHH
Q 018244          292 CLQYEPRERPNPRSLVT  308 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~  308 (359)
                      ||..+|++|||+.+++.
T Consensus       234 ~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         234 CFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HHhCChhhCcCHHHHhc
Confidence            99999999999999885

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=9.9e-42  Score=335.25  Aligned_cols=240  Identities=17%  Similarity=0.202  Sum_probs=202.5

Q ss_pred             ccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCC
Q 018244           63 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs  139 (359)
                      ..+|.|.||.||.|. ..+|...|+|-+......  ....+.+|..+|..|+|||+|+++|+-.+.+.++|.||||.+|+
T Consensus      1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~Gs 1320 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGS 1320 (1509)
T ss_pred             cccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCc
Confidence            356999999999999 678999999988754332  34567889999999999999999999999999999999999999


Q ss_pred             HhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--------CC
Q 018244          140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--------RS  211 (359)
Q Consensus       140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--------~~  211 (359)
                      |.+++.  .++..++.....+..|++.|++|||+. |||||||||+||+++.+|.+|++|||.|......        +.
T Consensus      1321 La~ll~--~gri~dE~vt~vyt~qll~gla~LH~~-gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~ 1397 (1509)
T KOG4645|consen 1321 LASLLE--HGRIEDEMVTRVYTKQLLEGLAYLHEH-GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQS 1397 (1509)
T ss_pred             HHHHHH--hcchhhhhHHHHHHHHHHHHHHHHHhc-CceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHh
Confidence            999996  556788889999999999999999999 9999999999999999999999999999876543        24


Q ss_pred             cCCCccccCcccccCCC---CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~---~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                      ..||+.|||||++.+.+   ...++||||+|||++||+||+.|+.....+.......    .....+.+|...+.+-.++
T Consensus      1398 ~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V----~~gh~Pq~P~~ls~~g~dF 1473 (1509)
T KOG4645|consen 1398 MMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHV----AAGHKPQIPERLSSEGRDF 1473 (1509)
T ss_pred             hcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHH----hccCCCCCchhhhHhHHHH
Confidence            57899999999998643   5678999999999999999999875443322221111    2223345677799999999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~  309 (359)
                      +..||..||++|.++.++++.
T Consensus      1474 le~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1474 LEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             HHHHHhcCchhhhHHHHHHHh
Confidence            999999999999999887764

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.2e-39  Score=300.34  Aligned_cols=258  Identities=17%  Similarity=0.251  Sum_probs=200.1

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeC-----Ccce
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERL  129 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~  129 (359)
                      .|.+++.||.|+||+||+|.. .++..||||.+....  ......+.+|+.+++.++|+||+++++++...     ...+
T Consensus         6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~   85 (337)
T cd07858           6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVY   85 (337)
T ss_pred             ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEE
Confidence            467788889999999999984 568899999987532  22345678899999999999999999988654     3479


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +|+||+. ++|.+++.  ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++......
T Consensus        86 lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~  161 (337)
T cd07858          86 IVYELMD-TDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSA-NVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK  161 (337)
T ss_pred             EEEeCCC-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence            9999996 58988886  345799999999999999999999999 9999999999999999999999999998865433


Q ss_pred             ----CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhh-------------------hhh
Q 018244          210 ----RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-------------------RNI  265 (359)
Q Consensus       210 ----~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~-------------------~~~  265 (359)
                          ....++..|+|||.+.. ..++.++||||||+++|+|++|+.||..........                   ...
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (337)
T cd07858         162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA  241 (337)
T ss_pred             cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence                23456789999998865 458899999999999999999998886532111000                   000


Q ss_pred             hhhcc---ccccC---CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHhhhcccC
Q 018244          266 QTLTD---SCLEG---QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQKDTEV  319 (359)
Q Consensus       266 ~~~~~---~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~--L~~~~~~~~~  319 (359)
                      .....   .....   ......+.++.+++.+||+.+|++|||+++++++  +..+......
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~  303 (337)
T cd07858         242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDE  303 (337)
T ss_pred             hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccC
Confidence            00000   00000   0112456789999999999999999999999987  6665544433

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-39  Score=292.63  Aligned_cols=248  Identities=19%  Similarity=0.253  Sum_probs=198.7

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      |.+++.||.|++|.||+|.. .+++.+|+|.+......  ....+.+|+++++.++|+||+++++++..+...++|+||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            45677889999999999985 46889999998765433  3456888999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----C
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----~  211 (359)
                      ++ +|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||.+.......    .
T Consensus        81 ~~-~l~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~  157 (283)
T cd05118          81 DT-DLYKLIKD-RQRGLPESLIKSYLYQLLQGLAFCHSH-GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTH  157 (283)
T ss_pred             CC-CHHHHHHh-hcccCCHHHHHHHHHHHHHHHHHHHHC-CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccC
Confidence            76 88888764 336789999999999999999999999 99999999999999999999999999987665432    3


Q ss_pred             cCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccc------------------
Q 018244          212 YSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC------------------  272 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~------------------  272 (359)
                      ..++..|+|||.+.+. .++.++|+||||+++|+|+||+.||+.................+.                  
T Consensus       158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (283)
T cd05118         158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF  237 (283)
T ss_pred             ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence            4567789999998876 688999999999999999999988865432211111100000000                  


Q ss_pred             ------ccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          273 ------LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       273 ------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                            .........+.++.+++.+||+.||.+||++.+++..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~  280 (283)
T cd05118         238 PKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH  280 (283)
T ss_pred             ccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence                  0000112356789999999999999999999999863

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=2.2e-39  Score=286.48  Aligned_cols=245  Identities=16%  Similarity=0.228  Sum_probs=204.0

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      |++.+.+|.|++|.||++.. .++..+|+|.+.....  .....+.+|+++++.++|+||+++.+++......++||||+
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (256)
T cd08530           2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA   81 (256)
T ss_pred             ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence            66778889999999999984 4688999999976432  23456788999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--CC
Q 018244          136 PNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RS  211 (359)
Q Consensus       136 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--~~  211 (359)
                      ++++|.+++.+.  ....+++..++.++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++......  ..
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~-~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~  160 (256)
T cd08530          82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ-KILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT  160 (256)
T ss_pred             CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEEecCCcEEEeeccchhhhccCCccc
Confidence            999999988642  235689999999999999999999999 9999999999999999999999999998765443  23


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ..++..|+|||.+.+..++.++|+||||+++|+|++|+.|+..............     ......+...+.++.+++.+
T Consensus       161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~  235 (256)
T cd08530         161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQR-----GKYPPIPPIYSQDLQNFIRS  235 (256)
T ss_pred             ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-----CCCCCCchhhCHHHHHHHHH
Confidence            3567899999999988899999999999999999999998876543332222211     11122334567889999999


Q ss_pred             hcccCCCCCCCHHHHHHH
Q 018244          292 CLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~  309 (359)
                      ||..+|++|||+.++++.
T Consensus       236 ~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         236 MLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             HcCCCcccCCCHHHHhcC
Confidence            999999999999999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=6.2e-40  Score=302.07  Aligned_cols=253  Identities=17%  Similarity=0.255  Sum_probs=195.3

Q ss_pred             CcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeeeCC-----cce
Q 018244           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~  129 (359)
                      .+|.+.+.||+|+||.||+|. ..++..||+|.+.... ......+.+|+.+++.++|+||+++++++....     ..+
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   84 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY   84 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence            357788889999999999998 4568899999987432 223456788999999999999999999876543     479


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +++||+.+ +|.+++   ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus        85 lv~e~~~~-~l~~~~---~~~~l~~~~~~~i~~ql~~aL~~LH~~-~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~  159 (336)
T cd07849          85 IVQELMET-DLYKLI---KTQHLSNDHIQYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE  159 (336)
T ss_pred             EEehhccc-CHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence            99999975 788877   445799999999999999999999999 9999999999999999999999999998765432


Q ss_pred             C-------CcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhh-----------hhh---
Q 018244          210 R-------SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------IQT---  267 (359)
Q Consensus       210 ~-------~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~-----------~~~---  267 (359)
                      .       ...++..|+|||.+.+ ..++.++||||||+++|+|++|+.||............           ...   
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (336)
T cd07849         160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIIS  239 (336)
T ss_pred             ccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhc
Confidence            1       2356788999998765 45889999999999999999999888654221110000           000   


Q ss_pred             -----hcccc-ccCC-----CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHhh
Q 018244          268 -----LTDSC-LEGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQ  314 (359)
Q Consensus       268 -----~~~~~-~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~--L~~~~  314 (359)
                           ..... ....     .....+.++.+++.+||+.||++|||+.+++++  ++...
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         240 LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             hhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence                 00000 0000     011235679999999999999999999999986  55443

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=1.5e-39  Score=296.14  Aligned_cols=252  Identities=21%  Similarity=0.246  Sum_probs=196.1

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCch--HHHHHHHHHHHhcCCCcccccccceeeeC--Ccce
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL  129 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~  129 (359)
                      +...|++++.||.|+||.||+|.. .+|..||+|.+.......  ...+.+|+.+++.++|+||+++++++...  +..+
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF   84 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence            456788999999999999999995 468899999987543221  23466899999999999999999998754  4689


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +||||+.+ +|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++......
T Consensus        85 lv~e~~~~-~l~~~l~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~  161 (309)
T cd07845          85 LVMEYCEQ-DLASLLDN-MPTPFSESQVKCLMLQLLRGLQYLHEN-FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP  161 (309)
T ss_pred             EEEecCCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence            99999975 78888764 346789999999999999999999999 9999999999999999999999999998865433


Q ss_pred             ----CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcc--------------
Q 018244          210 ----RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD--------------  270 (359)
Q Consensus       210 ----~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~--------------  270 (359)
                          ....++..|+|||.+.+ ..++.++||||||+++|+|++|..||..................              
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (309)
T cd07845         162 AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPL  241 (309)
T ss_pred             cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccc
Confidence                12234678999999875 45789999999999999999999888654322211111100000              


Q ss_pred             --c-ccc-CCC------ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          271 --S-CLE-GQF------SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       271 --~-~~~-~~~------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                        . ... ...      ....++++.+++.+||+.||++|||+++++.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h  290 (309)
T cd07845         242 VGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES  290 (309)
T ss_pred             cccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence              0 000 000      01246778999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-39  Score=291.52  Aligned_cols=248  Identities=21%  Similarity=0.244  Sum_probs=196.1

Q ss_pred             ccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeC--CcceEEEe
Q 018244           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLVAE  133 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e  133 (359)
                      |.+++.||.|++|.||+|+.. ++..+|+|.+....  ......+.+|+++++.++|+|++++++++...  ...++|+|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            467788899999999999954 58899999998763  23345688899999999999999999999888  78999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC---
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~---  210 (359)
                      |+++ +|.+++.. ....+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++.......   
T Consensus        81 ~~~~-~l~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~-~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~  157 (287)
T cd07840          81 YMDH-DLTGLLDS-PEVKFTESQIKCYMKQLLEGLQYLHSN-GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD  157 (287)
T ss_pred             cccc-cHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence            9975 89888854 235789999999999999999999999 99999999999999999999999999988665432   


Q ss_pred             --CcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccc----------------
Q 018244          211 --SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS----------------  271 (359)
Q Consensus       211 --~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~----------------  271 (359)
                        ...++..|+|||.+.+. .++.++||||||+++|+|++|..||..................+                
T Consensus       158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T cd07840         158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN  237 (287)
T ss_pred             ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhh
Confidence              23457789999987653 57899999999999999999998886543322111111000000                


Q ss_pred             ---------cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          272 ---------CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       272 ---------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                               .....+....+..+.+++.+||+.+|++|||+.+++..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  284 (287)
T cd07840         238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH  284 (287)
T ss_pred             ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence                     00000011126789999999999999999999998863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=2.8e-39  Score=294.91  Aligned_cols=240  Identities=18%  Similarity=0.210  Sum_probs=187.3

Q ss_pred             CCcEEEEEE-eCCCcEEEEEEeCCC--CCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCHhhhhh
Q 018244           69 APNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF  145 (359)
Q Consensus        69 ~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~  145 (359)
                      ++|.||.++ ..+++.||||++...  .....+.+.+|+++++.++|+||+++++++...+..+++|||+++|+|.+++.
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~   91 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK   91 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence            444555555 336889999999765  23345678999999999999999999999999999999999999999999997


Q ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-----------CCcCC
Q 018244          146 HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----------RSYST  214 (359)
Q Consensus       146 ~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-----------~~~~~  214 (359)
                      ......+++..+..++.|++.||.|||++ +|+|+||||+||+++.++.++|+|||.+......           ....+
T Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~-~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (314)
T cd08216          92 THFPEGLPELAIAFILKDVLNALDYIHSK-GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVK  170 (314)
T ss_pred             HhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccc
Confidence            55456789999999999999999999999 9999999999999999999999999987643211           22345


Q ss_pred             CccccCcccccCC--CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh----hhc-------------------
Q 018244          215 NLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ----TLT-------------------  269 (359)
Q Consensus       215 t~~y~aPE~~~~~--~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~----~~~-------------------  269 (359)
                      +..|+|||.+.+.  .++.++||||||+++|+|++|..||..............    ...                   
T Consensus       171 ~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (314)
T cd08216         171 NLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSN  250 (314)
T ss_pred             cccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccc
Confidence            6789999998763  488899999999999999999998865322111100000    000                   


Q ss_pred             -----cccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          270 -----DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       270 -----~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                           ............+.++.+++.+||..||++|||+++++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  295 (314)
T cd08216         251 EHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH  295 (314)
T ss_pred             cccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence                 0000011123456789999999999999999999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=2e-39  Score=293.15  Aligned_cols=250  Identities=16%  Similarity=0.182  Sum_probs=193.0

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCC-CcccccccceeeeCCc-----c
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLR-NRRLANLLGCCCEGDE-----R  128 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~-----~  128 (359)
                      .|++.+.||+|+||.||+|.. .+++.||+|.+......  ....+.+|+.+++.+. |+||+++++++...+.     .
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~   81 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL   81 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence            467778889999999999995 46889999998754322  2456788999999995 6999999999887665     8


Q ss_pred             eEEEecCCCCCHhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC-CCCeEEeccCCcc
Q 018244          129 LLVAEYMPNDTLAKHLFHWE---TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMK  204 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~-~~~~kl~DFg~a~  204 (359)
                      ++||||+++ +|.+++....   ...+++..++.++.||+.||.|||++ +++|+||||+||+++. ++.++|+|||++.
T Consensus        82 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~~~nil~~~~~~~~kl~dfg~~~  159 (295)
T cd07837          82 YLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH-GVMHRDLKPQNLLVDKQKGLLKIADLGLGR  159 (295)
T ss_pred             EEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEEecCCCeEEEeecccce
Confidence            999999986 7888876422   34689999999999999999999999 9999999999999998 8999999999987


Q ss_pred             cCCCC----CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccc--------
Q 018244          205 NSRDG----RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS--------  271 (359)
Q Consensus       205 ~~~~~----~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~--------  271 (359)
                      .....    ....+++.|+|||.+.+. .++.++||||||+++|+|++|..||...............+..+        
T Consensus       160 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (295)
T cd07837         160 AFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGV  239 (295)
T ss_pred             ecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcch
Confidence            54322    223457889999988754 47899999999999999999998886542211110000000000        


Q ss_pred             ----------ccc----CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          272 ----------CLE----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       272 ----------~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                ...    .......+..+.++|.+||..||.+|||+.+++.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~  291 (295)
T cd07837         240 SKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH  291 (295)
T ss_pred             hhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence                      000    00012356789999999999999999999998863

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=2.2e-39  Score=287.70  Aligned_cols=238  Identities=21%  Similarity=0.218  Sum_probs=195.4

Q ss_pred             CCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCH
Q 018244           65 HGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (359)
Q Consensus        65 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL  140 (359)
                      ||.|+||.||+++.. ++..+|+|.+.....   ...+.+.+|+++++.++|+||+++++.+......++++||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            589999999999965 488999999976543   3355688999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-----------
Q 018244          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----------  209 (359)
Q Consensus       141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-----------  209 (359)
                      .+++.+  ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++......           
T Consensus        81 ~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  157 (265)
T cd05579          81 ASLLEN--VGSLDEDVARIYIAEIVLALEYLHSN-GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE  157 (265)
T ss_pred             HHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHc-CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence            999864  34789999999999999999999999 9999999999999999999999999998754332           


Q ss_pred             -CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChH--HHHHHH
Q 018244          210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EGTELV  286 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~  286 (359)
                       ....++..|+|||.+....++.++||||||+++|+|++|..|+...............    .  ...+..  .+..+.
T Consensus       158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~  231 (265)
T cd05579         158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNG----K--IEWPEDVEVSDEAI  231 (265)
T ss_pred             ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC----C--cCCCccccCCHHHH
Confidence             1234677899999998888899999999999999999999988655433322221110    0  111222  367899


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHH
Q 018244          287 RLASRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~L~  311 (359)
                      +++.+||+.+|++|||+..+.+.|+
T Consensus       232 ~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         232 DLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             HHHHHHhcCCHhhcCCCccHHHHhc
Confidence            9999999999999999955554443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=1.9e-39  Score=291.59  Aligned_cols=249  Identities=16%  Similarity=0.238  Sum_probs=196.9

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .|++++.||.|++|.||+|+.. +|..||+|.+...... ....+.+|+.+++.++|+||+++++++...+..++||||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            3677888999999999999964 6889999999865432 2456788999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----C
Q 018244          136 PNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~  210 (359)
                      ++ +|.+++.... ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++......    .
T Consensus        81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~  158 (284)
T cd07836          81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN-RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFS  158 (284)
T ss_pred             Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccc
Confidence            85 8888876432 34689999999999999999999999 9999999999999999999999999998754332    2


Q ss_pred             CcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcc------------ccccCC-
Q 018244          211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD------------SCLEGQ-  276 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~------------~~~~~~-  276 (359)
                      ...++..|+|||.+.+. .++.++||||||+++|+|++|..||..................            +..... 
T Consensus       159 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07836         159 NEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTF  238 (284)
T ss_pred             cccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccc
Confidence            33467889999988764 4788999999999999999999887654322211111100000            000000 


Q ss_pred             ----------CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          277 ----------FSSDEGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       277 ----------~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                                .....+..+.+++.+||+.||++||++.++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         239 PRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             cCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                      11234577899999999999999999999885

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-39  Score=296.50  Aligned_cols=249  Identities=16%  Similarity=0.220  Sum_probs=193.0

Q ss_pred             ccccccCCCCCCcEEEEEEeC---CCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeC--CcceE
Q 018244           59 ENIVSEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL  130 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l  130 (359)
                      |.+++.||+|++|.||+|...   ++..||+|.+....   ....+.+.+|+.+++.++||||+++++++...  ...++
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence            667888999999999999954   47899999998743   23345678899999999999999999999988  78999


Q ss_pred             EEecCCCCCHhhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC----CCCeEEeccCCc
Q 018244          131 VAEYMPNDTLAKHLFHW---ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD----DVNPRLSCFGLM  203 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~----~~~~kl~DFg~a  203 (359)
                      ||||+++ +|.+++...   ....+++..++.++.|++.||+|||+. +++|+||||+||+++.    ++.+||+|||++
T Consensus        82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~  159 (316)
T cd07842          82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN-WVLHRDLKPANILVMGEGPERGVVKIGDLGLA  159 (316)
T ss_pred             EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence            9999975 677766432   223689999999999999999999999 9999999999999999    899999999998


Q ss_pred             ccCCCC-------CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHH-----hhhhh-----
Q 018244          204 KNSRDG-------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI-----RDRNI-----  265 (359)
Q Consensus       204 ~~~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~-----~~~~~-----  265 (359)
                      ......       ....++..|+|||.+.+. .++.++||||||+++|+|++|+.||........     .....     
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (316)
T cd07842         160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE  239 (316)
T ss_pred             cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence            865432       233567889999988764 578899999999999999999988764322110     00000     


Q ss_pred             -------------------hhhccccccCCCC-----------hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          266 -------------------QTLTDSCLEGQFS-----------SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       266 -------------------~~~~~~~~~~~~~-----------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                         ...........++           ...+.++.+++.+||+.||++|||+.+++.+
T Consensus       240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~  313 (316)
T cd07842         240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH  313 (316)
T ss_pred             HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence                               0000000000111           0344678999999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=3.5e-39  Score=291.56  Aligned_cols=250  Identities=12%  Similarity=0.056  Sum_probs=183.4

Q ss_pred             CcccccccCCCCCCcEEEEEEeCC----CcEEEEEEeCCCCCchH-----------HHHHHHHHHHhcCCCcccccccce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPDA-----------RQFLEEARAVGQLRNRRLANLLGC  121 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~-----------~~~~~e~~~l~~l~h~niv~~~~~  121 (359)
                      ..|.+.+.||+|+||+||+|...+    +..+|+|..........           .....+...+..+.|+|+++++++
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            468888999999999999998543    45567776443322111           112234455667789999999987


Q ss_pred             eeeCC----cceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEE
Q 018244          122 CCEGD----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL  197 (359)
Q Consensus       122 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl  197 (359)
                      +....    ..++++|++.. ++.+.+..  ....++..+..++.|++.||.|||+. +++||||||+|||++.++.++|
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiHrDiKp~Nill~~~~~~~l  167 (294)
T PHA02882         92 GSFKRCRMYYRFILLEKLVE-NTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEH-GISHGDIKPENIMVDGNNRGYI  167 (294)
T ss_pred             eeEecCCceEEEEEEehhcc-CHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCcEEE
Confidence            65543    34778888754 67666642  23467888999999999999999999 9999999999999999999999


Q ss_pred             eccCCcccCCCC-----------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchh-HHHhhhhh
Q 018244          198 SCFGLMKNSRDG-----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNI  265 (359)
Q Consensus       198 ~DFg~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~-~~~~~~~~  265 (359)
                      +|||+++.....           ....||+.|+|||+..+..++.++||||||+++|||++|..||..... ........
T Consensus       168 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~  247 (294)
T PHA02882        168 IDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAK  247 (294)
T ss_pred             EEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhH
Confidence            999998764311           223588999999999988999999999999999999999998865421 11111111


Q ss_pred             hhhccccccC-CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 018244          266 QTLTDSCLEG-QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL  310 (359)
Q Consensus       266 ~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L  310 (359)
                      .......... ......+..+.+++..||+.+|++||++.++++.|
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        248 CDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             HHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            1111110000 11233467899999999999999999999998865

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.1e-39  Score=286.56  Aligned_cols=244  Identities=16%  Similarity=0.186  Sum_probs=197.9

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC-----CchHHHHHHHHHHHhcCCCcccccccceeeeC--Ccce
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-----WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL  129 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~  129 (359)
                      .|++.+.||+|+||.||+|.. .++..||+|.+....     ......+.+|+++++.++|+||+++++++.+.  ...+
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (264)
T cd06653           3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS   82 (264)
T ss_pred             ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence            467778889999999999984 568899999875321     22345688999999999999999999998764  4578


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +++||+++++|.+++..  ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++.....
T Consensus        83 ~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~-~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  159 (264)
T cd06653          83 IFVEYMPGGSIKDQLKA--YGALTENVTRRYTRQILQGVSYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI  159 (264)
T ss_pred             EEEEeCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence            99999999999999863  34588999999999999999999999 9999999999999999999999999998754321


Q ss_pred             -------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHH
Q 018244          210 -------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       210 -------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                             ....++..|+|||.+.+..++.++|+||||+++|+|++|+.||.........    ............+...+
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~p~~~~  235 (264)
T cd06653         160 CMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAI----FKIATQPTKPMLPDGVS  235 (264)
T ss_pred             cccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHH----HHHHcCCCCCCCCcccC
Confidence                   1245788999999999888999999999999999999999888654222111    11111112233456677


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+.+++.+||. +|..|||+.+++.+
T Consensus       236 ~~~~~~i~~~l~-~~~~r~~~~~~~~~  261 (264)
T cd06653         236 DACRDFLKQIFV-EEKRRPTAEFLLRH  261 (264)
T ss_pred             HHHHHHHHHHhc-CcccCccHHHHhcC
Confidence            889999999999 57999999988763

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.7e-39  Score=298.36  Aligned_cols=253  Identities=21%  Similarity=0.316  Sum_probs=202.2

Q ss_pred             ccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeCC-----cceE
Q 018244           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERLL  130 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~l  130 (359)
                      |.+.+.||.|++|.||+|... ++..||+|.+....  ....+.+.+|+.+++.++|+||+++.+++....     ..++
T Consensus         2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l   81 (330)
T cd07834           2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI   81 (330)
T ss_pred             ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence            677788899999999999954 58899999997643  233567889999999999999999999998775     7899


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      +|||+.+ +|.+++.  ....+++..+..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++.......
T Consensus        82 v~e~~~~-~l~~~l~--~~~~l~~~~~~~i~~~l~~~l~~LH~~-gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~  157 (330)
T cd07834          82 VTELMET-DLHKVIK--SPQPLTDDHIQYFLYQILRGLKYLHSA-NVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE  157 (330)
T ss_pred             Eecchhh-hHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEcccCceEeecccc
Confidence            9999975 8988886  344899999999999999999999999 99999999999999999999999999988755432


Q ss_pred             -------CcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccc----------
Q 018244          211 -------SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC----------  272 (359)
Q Consensus       211 -------~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~----------  272 (359)
                             ...++..|+|||.+.+. .++.++|+||||+++|+|++|..||..................+.          
T Consensus       158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  237 (330)
T cd07834         158 DEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSE  237 (330)
T ss_pred             cccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhcccc
Confidence                   33567889999999887 789999999999999999999998876543221111111000000          


Q ss_pred             --------cc-------CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHhhh
Q 018244          273 --------LE-------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQK  315 (359)
Q Consensus       273 --------~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~--L~~~~~  315 (359)
                              ..       .......+.++.+++.+||+.+|++|||+.+++.+  ++.+..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~  297 (330)
T cd07834         238 KARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD  297 (330)
T ss_pred             chhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence                    00       00112246789999999999999999999999975  665544

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=4.1e-39  Score=291.43  Aligned_cols=250  Identities=18%  Similarity=0.264  Sum_probs=195.2

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeCC-CcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWP-DARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv  131 (359)
                      .+..|.+++.||+|++|.||+|...+ +..+|||.+...... ....+.+|+.++.... |+||+++++++......+++
T Consensus        13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v   92 (296)
T cd06618          13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC   92 (296)
T ss_pred             CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence            45667888999999999999999654 889999999765332 3445677887776765 99999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-  210 (359)
                      |||+.+ +|.+++.. ....+++..+..++.|++.||+|||+..+++|+||+|+||++++++.++|+|||++....... 
T Consensus        93 ~e~~~~-~l~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~  170 (296)
T cd06618          93 MELMST-CLDKLLKR-IQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA  170 (296)
T ss_pred             eeccCc-CHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc
Confidence            999854 77777654 345789999999999999999999973399999999999999999999999999987654322 


Q ss_pred             --CcCCCccccCcccccCCC----CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccc-cCCCChHHHH
Q 018244          211 --SYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL-EGQFSSDEGT  283 (359)
Q Consensus       211 --~~~~t~~y~aPE~~~~~~----~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  283 (359)
                        ...++..|+|||.+.+..    ++.++||||||+++|+|++|+.||.........   ......... ........+.
T Consensus       171 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  247 (296)
T cd06618         171 KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEV---LTKILQEEPPSLPPNEGFSP  247 (296)
T ss_pred             ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHH---HHHHhcCCCCCCCCCCCCCH
Confidence              234677899999987553    788999999999999999999888653211100   001111110 0011123567


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ++.+|+.+||+.||++|||+.+++.+
T Consensus       248 ~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         248 DFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhcC
Confidence            89999999999999999999999875

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=5.1e-39  Score=288.19  Aligned_cols=238  Identities=19%  Similarity=0.195  Sum_probs=187.9

Q ss_pred             CCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc---hHHHHHHHH---HHHhcCCCcccccccceeeeCCcceEEEecCCC
Q 018244           65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEA---RAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (359)
Q Consensus        65 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~---~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  137 (359)
                      ||+|+||.||+|.. .+++.||+|.+......   ....+..|.   +.++...||||+.+.+++...+..++||||+.+
T Consensus         2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g   81 (278)
T cd05606           2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG   81 (278)
T ss_pred             cccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCC
Confidence            69999999999984 56889999998754322   112233343   345556799999999999999999999999999


Q ss_pred             CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--CCcCCC
Q 018244          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYSTN  215 (359)
Q Consensus       138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--~~~~~t  215 (359)
                      |+|.+++.  ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......  ....|+
T Consensus        82 ~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  158 (278)
T cd05606          82 GDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT  158 (278)
T ss_pred             CcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCC
Confidence            99999886  345799999999999999999999999 9999999999999999999999999998754322  244678


Q ss_pred             ccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcc
Q 018244          216 LAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ  294 (359)
Q Consensus       216 ~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  294 (359)
                      ..|+|||.+.++ .++.++||||+|+++|+|++|..||............  ... .......+...+.++.+++.+||.
T Consensus       159 ~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~--~~~-~~~~~~~~~~~s~~~~~li~~~l~  235 (278)
T cd05606         159 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID--RMT-LTMAVELPDSFSPELRSLLEGLLQ  235 (278)
T ss_pred             cCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHH--HHh-hccCCCCCCcCCHHHHHHHHHHhh
Confidence            999999999754 5889999999999999999999988654211111000  000 001122334457889999999999


Q ss_pred             cCCCCCC-----CHHHHHH
Q 018244          295 YEPRERP-----NPRSLVT  308 (359)
Q Consensus       295 ~dp~~Rp-----s~~~il~  308 (359)
                      .+|.+||     ++.++++
T Consensus       236 ~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         236 RDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             cCHHhccCCCCCCHHHHHh
Confidence            9999999     9999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2e-39  Score=290.09  Aligned_cols=249  Identities=18%  Similarity=0.285  Sum_probs=195.0

Q ss_pred             ccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhc--CCCcccccccceeeeCC----cceEEE
Q 018244           59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQ--LRNRRLANLLGCCCEGD----ERLLVA  132 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~----~~~lv~  132 (359)
                      .++++.+|+|.||.||||.+.+ +.||||++...   +.+.|.+|-++...  ++|+||++++++-....    .++||+
T Consensus       212 l~l~eli~~Grfg~V~KaqL~~-~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt  287 (534)
T KOG3653|consen  212 LQLLELIGRGRFGCVWKAQLDN-RLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT  287 (534)
T ss_pred             hhhHHHhhcCccceeehhhccC-ceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence            3455566999999999999855 68999999853   34566666666554  58999999999887666    789999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC--------CCcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK--------ERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--------~~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                      +|.+.|+|.+||   +...++|....+|+..|++||+|||..        ..|+|||||..||||.+|++..|+|||+|.
T Consensus       288 ~fh~kGsL~dyL---~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl  364 (534)
T KOG3653|consen  288 EFHPKGSLCDYL---KANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLAL  364 (534)
T ss_pred             eeccCCcHHHHH---HhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeE
Confidence            999999999999   567899999999999999999999973        579999999999999999999999999998


Q ss_pred             cCCCCC------CcCCCccccCcccccCCC-CC-----CccchhhHHHHHHHHHhCCCCCC-------cc----------
Q 018244          205 NSRDGR------SYSTNLAFTPPEYLRTGR-VT-----PESVMYSFGTLLLDLLSGKHIPP-------SH----------  255 (359)
Q Consensus       205 ~~~~~~------~~~~t~~y~aPE~~~~~~-~~-----~~~Di~slG~il~elltg~~p~~-------~~----------  255 (359)
                      .+..+.      ..+||.+|||||++.+.- +.     ...||||+|.+||||++.-.-..       .-          
T Consensus       365 ~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hP  444 (534)
T KOG3653|consen  365 RLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHP  444 (534)
T ss_pred             EecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCC
Confidence            776543      457899999999998642 22     36899999999999998653221       11          


Q ss_pred             hhHHHhhhhhhhhccccccCCCCh-----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          256 ALDLIRDRNIQTLTDSCLEGQFSS-----DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      ..+.+...    .+....++.++.     ....-+++.+..||+.||+.|.|+.-+-+++..+.....
T Consensus       445 t~e~mq~~----VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~  508 (534)
T KOG3653|consen  445 TLEEMQEL----VVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE  508 (534)
T ss_pred             CHHHHHHH----HHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence            11111111    122223333333     245679999999999999999999999998888765443

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=3.3e-39  Score=293.62  Aligned_cols=251  Identities=18%  Similarity=0.218  Sum_probs=191.9

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCc----
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDE----  127 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----  127 (359)
                      ....|.+++.||.|+||.||+|.. .++..||||.+......  ....+.+|+++++.++||||+++++++.....    
T Consensus        10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (310)
T cd07865          10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR   89 (310)
T ss_pred             hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence            345688899999999999999995 46889999998654322  23356789999999999999999998876543    


Q ss_pred             ----ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCc
Q 018244          128 ----RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (359)
Q Consensus       128 ----~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a  203 (359)
                          .++||||+.+ +|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++
T Consensus        90 ~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~  166 (310)
T cd07865          90 YKGSFYLVFEFCEH-DLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRN-KILHRDMKAANILITKDGILKLADFGLA  166 (310)
T ss_pred             CCceEEEEEcCCCc-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEECCCCcEEECcCCCc
Confidence                4999999965 78887753 334689999999999999999999999 9999999999999999999999999998


Q ss_pred             ccCCCCC--------CcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcc---c
Q 018244          204 KNSRDGR--------SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD---S  271 (359)
Q Consensus       204 ~~~~~~~--------~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~---~  271 (359)
                      .......        ...++..|+|||.+.+.. ++.++||||||+++|+|++|..|+............ ..+..   +
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~-~~~~~~~~~  245 (310)
T cd07865         167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLI-SQLCGSITP  245 (310)
T ss_pred             ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HHHhCCCCh
Confidence            7653321        224567899999887654 788999999999999999999887654322111000 00000   0


Q ss_pred             c---------------ccCC---------CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          272 C---------------LEGQ---------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       272 ~---------------~~~~---------~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .               ....         .+...+..+.+++.+||..||++|||+++++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         246 EVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             hhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence            0               0000         001124567899999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-40  Score=320.71  Aligned_cols=254  Identities=17%  Similarity=0.137  Sum_probs=210.5

Q ss_pred             HHHHHhcCCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCC---CCchHHHHHHHHHHHhcCCCcccccccceee
Q 018244           48 TLRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCC  123 (359)
Q Consensus        48 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~  123 (359)
                      .+....-+-.+|.+++.||+|+||.|..++. .+++.+|+|++++-   ...+..-|..|-.+|..-..+=|++++..|+
T Consensus        66 ~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ  145 (1317)
T KOG0612|consen   66 KVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ  145 (1317)
T ss_pred             HHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc
Confidence            3444445667888999999999999999994 56889999999862   2233456888999999999999999999999


Q ss_pred             eCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCc
Q 018244          124 EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (359)
Q Consensus       124 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a  203 (359)
                      +..++|+||||++||+|..++.+.  ..+++..+..++..|..||.-||+. |.|||||||+|||||..|++||+|||.+
T Consensus       146 D~~~LYlVMdY~pGGDlltLlSk~--~~~pE~~ArFY~aEiVlAldslH~m-gyVHRDiKPDNvLld~~GHikLADFGsC  222 (1317)
T KOG0612|consen  146 DERYLYLVMDYMPGGDLLTLLSKF--DRLPEDWARFYTAEIVLALDSLHSM-GYVHRDIKPDNVLLDKSGHIKLADFGSC  222 (1317)
T ss_pred             CccceEEEEecccCchHHHHHhhc--CCChHHHHHHHHHHHHHHHHHHHhc-cceeccCCcceeEecccCcEeeccchhH
Confidence            999999999999999999999743  3799999999999999999999999 9999999999999999999999999988


Q ss_pred             ccCCCC-----CCcCCCccccCccccc----C-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccc
Q 018244          204 KNSRDG-----RSYSTNLAFTPPEYLR----T-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL  273 (359)
Q Consensus       204 ~~~~~~-----~~~~~t~~y~aPE~~~----~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  273 (359)
                      -....+     ...+|||.|++||++.    + +.|+..+|+||+||++|||+.|..||+.+..-.....+...    ..
T Consensus       223 lkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~h----k~  298 (1317)
T KOG0612|consen  223 LKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNH----KE  298 (1317)
T ss_pred             HhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhch----hh
Confidence            766643     2457999999999986    2 56999999999999999999999999987654443333322    11


Q ss_pred             cCCCC--hHHHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 018244          274 EGQFS--SDEGTELVRLASRCLQYEPRERPN---PRSLVTA  309 (359)
Q Consensus       274 ~~~~~--~~~~~~l~~li~~cl~~dp~~Rps---~~~il~~  309 (359)
                      ...+|  ...++++++||.+.+ -+|+.|..   ++++-.+
T Consensus       299 ~l~FP~~~~VSeeakdLI~~ll-~~~e~RLgrngiedik~H  338 (1317)
T KOG0612|consen  299 SLSFPDETDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNH  338 (1317)
T ss_pred             hcCCCcccccCHHHHHHHHHHh-cChhhhcccccHHHHHhC
Confidence            12233  457899999999988 46999987   7776553

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-40  Score=306.43  Aligned_cols=242  Identities=20%  Similarity=0.279  Sum_probs=204.1

Q ss_pred             ccccCCCCCCcEEEEEEeCC--C--cEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           61 IVSEHGEKAPNVVYKGKLEN--Q--FRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      +.+.||+|.||.|++|.|..  |  ..||||++...... ....|++|+.+|.+|+|+|+++++|+..+ ....+|||++
T Consensus       114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa  192 (1039)
T KOG0199|consen  114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA  192 (1039)
T ss_pred             HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence            44566999999999999753  3  46999999876544 46789999999999999999999999987 6788999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCc---
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---  212 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~---  212 (359)
                      +.|+|.+.|+......+-......++.|||.||.||.++ ++|||||-..|+|+...-.|||+|||+.+....+...   
T Consensus       193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk-rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm  271 (1039)
T KOG0199|consen  193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK-RLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM  271 (1039)
T ss_pred             ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh-hhhhhhhhhhhheecccceeeeecccceeccCCCCcceEe
Confidence            999999999876667888899999999999999999999 9999999999999999999999999999877655432   


Q ss_pred             ----CCCccccCcccccCCCCCCccchhhHHHHHHHHHhCC-CCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          213 ----STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK-HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       213 ----~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                          .....|+|||.+...+++.++|||+|||++|||+|+. .|+.+..-     ..+...++...+...+..+++++.+
T Consensus       272 ~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g-----~qIL~~iD~~erLpRPk~csedIY~  346 (1039)
T KOG0199|consen  272 APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG-----IQILKNIDAGERLPRPKYCSEDIYQ  346 (1039)
T ss_pred             cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH-----HHHHHhccccccCCCCCCChHHHHH
Confidence                2246799999999999999999999999999999855 45444321     1223334444445567889999999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ++..||..+|++|||+..|.+.
T Consensus       347 imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  347 IMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             HHHHhccCCccccccHHHHHHh
Confidence            9999999999999999999743

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=2.4e-39  Score=290.05  Aligned_cols=242  Identities=21%  Similarity=0.245  Sum_probs=200.5

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEEE
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~  132 (359)
                      +|.+.+.||.|+||.||+|.. .++..||+|++.....   .....+.+|+++++.+. |+||+++++++...+..++||
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   81 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL   81 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence            577888899999999999995 4788999999876322   22456788999999998 999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC--
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--  210 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~--  210 (359)
                      ||+.+++|.+++..  ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.......  
T Consensus        82 e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~-~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~  158 (280)
T cd05581          82 EYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSK-GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP  158 (280)
T ss_pred             cCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence            99999999999963  44799999999999999999999999 99999999999999999999999999987543322  


Q ss_pred             ----------------------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhh
Q 018244          211 ----------------------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL  268 (359)
Q Consensus       211 ----------------------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~  268 (359)
                                            ...++..|+|||.+.+..++.++||||||++++++++|..|+............    
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~----  234 (280)
T cd05581         159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKI----  234 (280)
T ss_pred             ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH----
Confidence                                  224578899999998888999999999999999999999887654322111111    


Q ss_pred             ccccccCCCChHHHHHHHHHHHHhcccCCCCCCCH----HHHHH
Q 018244          269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP----RSLVT  308 (359)
Q Consensus       269 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~----~~il~  308 (359)
                      ..  .....+...++.+.+++.+||+.+|++|||+    +++++
T Consensus       235 ~~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         235 LK--LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             Hh--cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            11  1123345557789999999999999999999    77664

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=9.5e-40  Score=319.86  Aligned_cols=246  Identities=19%  Similarity=0.214  Sum_probs=187.6

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeee--------
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCE--------  124 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--------  124 (359)
                      .+.+++.++.||+||||.||+++. -||..+|||++.... ......+.+|+.+|.+|+|||||+++..|.+        
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~  556 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL  556 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence            445666777789999999999994 489999999998764 2224568899999999999999999876500        


Q ss_pred             ----------------------------------------------------------------------C---------
Q 018244          125 ----------------------------------------------------------------------G---------  125 (359)
Q Consensus       125 ----------------------------------------------------------------------~---------  125 (359)
                                                                                            +         
T Consensus       557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~  636 (1351)
T KOG1035|consen  557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS  636 (1351)
T ss_pred             cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence                                                                                  0         


Q ss_pred             --------------------------------CcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 018244          126 --------------------------------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS  173 (359)
Q Consensus       126 --------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~  173 (359)
                                                      ..+||-||||+..+|.+++.++.. .-.....|+++++|+.||.|+|+
T Consensus       637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~-~~~~d~~wrLFreIlEGLaYIH~  715 (1351)
T KOG1035|consen  637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHF-NSQRDEAWRLFREILEGLAYIHD  715 (1351)
T ss_pred             CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhccc-chhhHHHHHHHHHHHHHHHHHHh
Confidence                                            124888999999777777743221 11467889999999999999999


Q ss_pred             CCCcccccCCCCCeeeCCCCCeEEeccCCcccCC----------------------CCCCcCCCccccCcccccCCC---
Q 018244          174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----------------------DGRSYSTNLAFTPPEYLRTGR---  228 (359)
Q Consensus       174 ~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~----------------------~~~~~~~t~~y~aPE~~~~~~---  228 (359)
                      . |+|||||||.||+++++..|||+|||+|+...                      ..+..+||.-|+|||++.+..   
T Consensus       716 ~-giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~  794 (1351)
T KOG1035|consen  716 Q-GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNK  794 (1351)
T ss_pred             C-ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccc
Confidence            9 99999999999999999999999999988611                      112456889999999998654   


Q ss_pred             CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccccc--CCCChHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 018244          229 VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE--GQFSSDEGTELVRLASRCLQYEPRERPNPRSL  306 (359)
Q Consensus       229 ~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i  306 (359)
                      |+.|+||||||+|++||+.   ||...... .  ..+..+.+..++  ..+.....+.-.++|.+|++.||++||||.|+
T Consensus       795 Yn~KiDmYSLGIVlFEM~y---PF~TsMER-a--~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eL  868 (1351)
T KOG1035|consen  795 YNSKIDMYSLGIVLFEMLY---PFGTSMER-A--SILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATEL  868 (1351)
T ss_pred             ccchhhhHHHHHHHHHHhc---cCCchHHH-H--HHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHH
Confidence            9999999999999999995   34433211 1  111122222211  22334455677899999999999999999999


Q ss_pred             HH
Q 018244          307 VT  308 (359)
Q Consensus       307 l~  308 (359)
                      |+
T Consensus       869 L~  870 (1351)
T KOG1035|consen  869 LN  870 (1351)
T ss_pred             hh
Confidence            86

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-40  Score=280.64  Aligned_cols=242  Identities=19%  Similarity=0.197  Sum_probs=197.1

Q ss_pred             cCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEEEecCCCCCHh
Q 018244           64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPNDTLA  141 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~gsL~  141 (359)
                      .||+|+|+.|-.++ ..+|..+|||++.+.......++.+|++++...+ |+||++++++|.++..+|||||-+.||+|.
T Consensus        85 ~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplL  164 (463)
T KOG0607|consen   85 LLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLL  164 (463)
T ss_pred             HhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHH
Confidence            47999999999998 7889999999999887666788999999999996 999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC---CCeEEeccCCcccCCCC---------
Q 018244          142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDG---------  209 (359)
Q Consensus       142 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~---~~~kl~DFg~a~~~~~~---------  209 (359)
                      +.|.  +...+++..+.+++.+|+.||.|||.+ ||.|||+||+|||...-   .-+||+||.+.......         
T Consensus       165 shI~--~~~~F~E~EAs~vvkdia~aLdFlH~k-gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP  241 (463)
T KOG0607|consen  165 SHIQ--KRKHFNEREASRVVKDIASALDFLHTK-GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTP  241 (463)
T ss_pred             HHHH--HhhhccHHHHHHHHHHHHHHHHHHhhc-CcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCc
Confidence            9998  567799999999999999999999999 99999999999999754   34999999886543322         


Q ss_pred             --CCcCCCccccCccccc---C--CCCCCccchhhHHHHHHHHHhCCCCCCcc-----hhHH-----Hhhhhhhhhcccc
Q 018244          210 --RSYSTNLAFTPPEYLR---T--GRVTPESVMYSFGTLLLDLLSGKHIPPSH-----ALDL-----IRDRNIQTLTDSC  272 (359)
Q Consensus       210 --~~~~~t~~y~aPE~~~---~--~~~~~~~Di~slG~il~elltg~~p~~~~-----~~~~-----~~~~~~~~~~~~~  272 (359)
                        .+.+|+..|||||+..   +  ..|+.++|.||||||+|-|++|..||.+.     .|+.     .-+..+-.-+...
T Consensus       242 ~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEG  321 (463)
T KOG0607|consen  242 ELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEG  321 (463)
T ss_pred             cccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhcc
Confidence              1235667899999764   2  34889999999999999999999999653     1111     0011111111111


Q ss_pred             ccCCCC----hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          273 LEGQFS----SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       273 ~~~~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      . ..+|    ...+.+..+++..++..|+.+|.++.+++++
T Consensus       322 k-YeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh  361 (463)
T KOG0607|consen  322 K-YEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH  361 (463)
T ss_pred             C-CcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence            1 1122    3578899999999999999999999999983

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=2.1e-39  Score=298.33  Aligned_cols=248  Identities=17%  Similarity=0.251  Sum_probs=193.8

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeee----CCcceE
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLL  130 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~l  130 (359)
                      .|.+.+.||.|++|.||+|.. .++..||+|++.....  .....+.+|+.+|+.++||||+++++++..    ....++
T Consensus         6 ~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l   85 (334)
T cd07855           6 RYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYV   85 (334)
T ss_pred             ceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEE
Confidence            466777889999999999984 5688999999875432  234567889999999999999999998763    346899


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      ||||+. ++|.+++.  ....+++..+..++.||+.||.|||++ +++|+||||+||++++++.+||+|||++.......
T Consensus        86 v~e~~~-~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~  161 (334)
T cd07855          86 VMDLME-SDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSA-NVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP  161 (334)
T ss_pred             EEehhh-hhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence            999996 58988885  345599999999999999999999999 99999999999999999999999999987643321


Q ss_pred             --------CcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhh-------------------
Q 018244          211 --------SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-------------------  262 (359)
Q Consensus       211 --------~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~-------------------  262 (359)
                              ...++..|+|||.+.+ ..++.++||||||+++|+|++|+.||..........                   
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  241 (334)
T cd07855         162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGS  241 (334)
T ss_pred             cCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhch
Confidence                    2356788999999865 458899999999999999999999886542211100                   


Q ss_pred             hhhhhhcccc-ccCCC-----ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          263 RNIQTLTDSC-LEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       263 ~~~~~~~~~~-~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .......... .....     ....+.++.+++.+||+.+|++|||+.+++.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  294 (334)
T cd07855         242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH  294 (334)
T ss_pred             hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            0000000000 00000     12346789999999999999999999999875

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=1.3e-40  Score=283.31  Aligned_cols=256  Identities=16%  Similarity=0.204  Sum_probs=197.2

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCC-----CcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeee-CCc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE-GDE  127 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~  127 (359)
                      ...|+.++.||+|.||.||+|...+     .+.+|+|.++....  .-....-+|+.+++.++|||++.+..++.. +..
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~  102 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK  102 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence            3478899999999999999996322     34699999986521  123457889999999999999999999988 678


Q ss_pred             ceEEEecCCCCCHhhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC----CCeEEecc
Q 018244          128 RLLVAEYMPNDTLAKHLFHW---ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD----VNPRLSCF  200 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~----~~~kl~DF  200 (359)
                      +++++||.+. +|...++..   +...++...+..|+.||+.|++|||++ =|+||||||.|||+..+    |.|||+||
T Consensus       103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N-WvlHRDLKPaNIlvmgdgperG~VKIaDl  180 (438)
T KOG0666|consen  103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN-WVLHRDLKPANILVMGDGPERGRVKIADL  180 (438)
T ss_pred             EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh-heeeccCCcceEEEeccCCccCeeEeecc
Confidence            9999999987 788888642   345788999999999999999999999 99999999999999876    99999999


Q ss_pred             CCcccCCCC-------CCcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhh---------h
Q 018244          201 GLMKNSRDG-------RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---------R  263 (359)
Q Consensus       201 g~a~~~~~~-------~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~---------~  263 (359)
                      |+++.+...       ...+.|.+|+|||.+.+.+ |+.+.||||.|||+.||+|-.+.|.....+.-..         .
T Consensus       181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~r  260 (438)
T KOG0666|consen  181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDR  260 (438)
T ss_pred             cHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHH
Confidence            999976543       3456689999999999875 9999999999999999999887765432111000         0


Q ss_pred             hhhhhcccc--------------------ccCCCC-----------hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 018244          264 NIQTLTDSC--------------------LEGQFS-----------SDEGTELVRLASRCLQYEPRERPNPRSLVTALVT  312 (359)
Q Consensus       264 ~~~~~~~~~--------------------~~~~~~-----------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~  312 (359)
                      ++..+-.+.                    ....+.           ..-++...+|+.++|..||-+|.|+++++++.--
T Consensus       261 If~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF  340 (438)
T KOG0666|consen  261 IFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYF  340 (438)
T ss_pred             HHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccccc
Confidence            000000000                    000000           0012348899999999999999999999987543


Q ss_pred             h
Q 018244          313 L  313 (359)
Q Consensus       313 ~  313 (359)
                      .
T Consensus       341 ~  341 (438)
T KOG0666|consen  341 T  341 (438)
T ss_pred             c
Confidence            3

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=6.5e-39  Score=287.99  Aligned_cols=249  Identities=16%  Similarity=0.267  Sum_probs=195.2

Q ss_pred             ccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEEEecC
Q 018244           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      |.+.+.||.|++|+||+|... ++..||+|.+...... ......+|+..++.++ |+|++++++++..++..++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            456778899999999999964 5788999998754322 2234567999999999 999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---CCc
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSY  212 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---~~~  212 (359)
                       +|+|.+++.......+++..+..++.|++.||.|||++ +++|+||+|+||++++++.++|+|||++......   ...
T Consensus        81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  158 (283)
T cd07830          81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH-GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDY  158 (283)
T ss_pred             -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCC
Confidence             77999988754445789999999999999999999999 9999999999999999999999999998866543   234


Q ss_pred             CCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhh-----------------hcccccc
Q 018244          213 STNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT-----------------LTDSCLE  274 (359)
Q Consensus       213 ~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~-----------------~~~~~~~  274 (359)
                      .++..|+|||.+.+ ..++.++|+||||+++++|++|..||+..............                 .......
T Consensus       159 ~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd07830         159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFP  238 (283)
T ss_pred             CCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccc
Confidence            56788999998864 45789999999999999999999888654221111000000                 0000000


Q ss_pred             -------CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          275 -------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       275 -------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                             .......+.++.+++.+||+.||++|||+++++..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  280 (283)
T cd07830         239 QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH  280 (283)
T ss_pred             ccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence                   00011125789999999999999999999998763

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=1e-38  Score=331.90  Aligned_cols=246  Identities=24%  Similarity=0.389  Sum_probs=196.5

Q ss_pred             ccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCC
Q 018244           61 IVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs  139 (359)
                      ....||+|+||.||+|.. .++..||||.+......    ...|++.+++++|||||+++++|.+.+..++||||+++|+
T Consensus       694 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~  769 (968)
T PLN00113        694 EENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKN  769 (968)
T ss_pred             cccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCc
Confidence            334569999999999995 57889999998754322    2346889999999999999999999999999999999999


Q ss_pred             HhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhh---cCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCcCCCc
Q 018244          140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCT---SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNL  216 (359)
Q Consensus       140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~t~  216 (359)
                      |.+++.     .++|..+..++.|++.||+|||   +. +++||||||+||+++.++..++. ||.+..........+|.
T Consensus       770 L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~  842 (968)
T PLN00113        770 LSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSP-AVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISS  842 (968)
T ss_pred             HHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCC-CeecCCCCHHhEEECCCCceEEE-eccccccccCCCccccc
Confidence            999994     3899999999999999999999   55 99999999999999998888876 66665544444557789


Q ss_pred             cccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchh-----HHHh-----hhhhhhhccccccC--CCChHHHHH
Q 018244          217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-----DLIR-----DRNIQTLTDSCLEG--QFSSDEGTE  284 (359)
Q Consensus       217 ~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~-----~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~  284 (359)
                      .|+|||++.+..++.++|||||||++|||+||+.|+.....     ..+.     ........++....  ..+.....+
T Consensus       843 ~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  922 (968)
T PLN00113        843 AYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVE  922 (968)
T ss_pred             cccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHH
Confidence            99999999988999999999999999999999998743210     0000     01111222222221  123345667


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 018244          285 LVRLASRCLQYEPRERPNPRSLVTALVTLQKDT  317 (359)
Q Consensus       285 l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~  317 (359)
                      +.+++.+||+.||++|||+.++++.|+.+.+..
T Consensus       923 ~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~  955 (968)
T PLN00113        923 VMNLALHCTATDPTARPCANDVLKTLESASRSS  955 (968)
T ss_pred             HHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence            889999999999999999999999999886533

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-39  Score=257.29  Aligned_cols=249  Identities=18%  Similarity=0.249  Sum_probs=202.2

Q ss_pred             cccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCch--HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .|...++||+|.||+||+|+ +.+++.||+|.+..+...+  .....+|+-+|+.++|.|||+++++...+..+-+|+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            45667788999999999999 6678999999998654222  34678999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----  210 (359)
                      |+. .|..+... -.+.++.+....++.|++.||.++|++ ++.|||+||.|.||+.+|.+||+|||+++.++-.-    
T Consensus        83 cdq-dlkkyfds-lng~~d~~~~rsfmlqllrgl~fchsh-nvlhrdlkpqnllin~ngelkladfglarafgipvrcys  159 (292)
T KOG0662|consen   83 CDQ-DLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHSH-NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS  159 (292)
T ss_pred             hhH-HHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhhh-hhhhccCCcceEEeccCCcEEecccchhhhcCCceEeee
Confidence            976 78888854 567899999999999999999999999 99999999999999999999999999999876543    


Q ss_pred             CcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccc--------------c
Q 018244          211 SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCL--------------E  274 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~--------------~  274 (359)
                      ..+.|.+|.+|.++.+.+ |+.+.|+||.|||+.|+.. |++.|++...+.........+-.+..              .
T Consensus       160 aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~y  239 (292)
T KOG0662|consen  160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPY  239 (292)
T ss_pred             ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCccc
Confidence            335689999999999876 8889999999999999976 56667776555443333332221110              1


Q ss_pred             CCCC---------hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          275 GQFS---------SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       275 ~~~~---------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.++         +..+..-++|+.+.+.-+|.+|.++++++++
T Consensus       240 p~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh  283 (292)
T KOG0662|consen  240 PIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH  283 (292)
T ss_pred             CCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence            1111         2234456899999999999999999998864

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=9.8e-39  Score=287.23  Aligned_cols=248  Identities=19%  Similarity=0.218  Sum_probs=193.9

Q ss_pred             ccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCch--HHHHHHHHHHHhcC---CCcccccccceeeeCCc-----
Q 018244           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPD--ARQFLEEARAVGQL---RNRRLANLLGCCCEGDE-----  127 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~-----  127 (359)
                      |++++.||.|+||.||+|+.. ++..+|+|.+.......  ...+.+|+.+++.+   .|+|++++++++...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            456778899999999999965 48899999997543221  33466777777666   59999999999988776     


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      .+++|||+.+ +|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~-~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~  158 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH-RIVHRDLKPQNILVTSDGQVKIADFGLARIYS  158 (287)
T ss_pred             eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence            9999999975 899888654445689999999999999999999999 99999999999999999999999999987754


Q ss_pred             CCC---CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhc---------------
Q 018244          208 DGR---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT---------------  269 (359)
Q Consensus       208 ~~~---~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~---------------  269 (359)
                      ...   ...++..|+|||.+.+..++.++|+||||+++|+|++|..||.................               
T Consensus       159 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (287)
T cd07838         159 FEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPR  238 (287)
T ss_pred             CCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccch
Confidence            332   23467889999999988899999999999999999999887765432221111111000               


Q ss_pred             ---ccccc---CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          270 ---DSCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       270 ---~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                         .....   .......+..+.+++.+||+.||++||++.+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         239 SSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             hhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence               00000   0011234678899999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=5.6e-39  Score=289.63  Aligned_cols=246  Identities=17%  Similarity=0.230  Sum_probs=195.1

Q ss_pred             ccccccCCCCCCcEEEEEEe----CCCcEEEEEEeCCCCC----chHHHHHHHHHHHhcC-CCcccccccceeeeCCcce
Q 018244           59 ENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW----PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  129 (359)
                      |++.+.||.|+||.||.|..    .+|..||+|++.....    ...+.+.+|++++..+ +|+||+.+++.+..+...+
T Consensus         2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (290)
T cd05613           2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH   81 (290)
T ss_pred             ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence            56778889999999999985    3688999999875321    2245678899999999 5999999999999988999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +||||+++++|.+++..  ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus        82 lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~  158 (290)
T cd05613          82 LILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED  158 (290)
T ss_pred             EEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence            99999999999999863  45688999999999999999999999 9999999999999999999999999998765432


Q ss_pred             C-----CcCCCccccCcccccCC--CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHH
Q 018244          210 R-----SYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       210 ~-----~~~~t~~y~aPE~~~~~--~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                      .     ...++..|+|||.+.+.  .++.++||||||+++|+|++|..|+...................  ...++...+
T Consensus       159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  236 (290)
T cd05613         159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS--EPPYPQEMS  236 (290)
T ss_pred             cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc--CCCCCccCC
Confidence            2     34578899999998753  46789999999999999999998875321111111111111111  112344567


Q ss_pred             HHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 018244          283 TELVRLASRCLQYEPRERP-----NPRSLVTA  309 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rp-----s~~~il~~  309 (359)
                      ..+.+++.+||+.||++||     ++.+++.+
T Consensus       237 ~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~  268 (290)
T cd05613         237 ALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH  268 (290)
T ss_pred             HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence            7899999999999999997     66666553

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=7.3e-39  Score=295.08  Aligned_cols=248  Identities=21%  Similarity=0.291  Sum_probs=192.4

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCC--CCchHHHHHHHHHHHhcC-CCcccccccceeeeC--CcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRS--AWPDARQFLEEARAVGQL-RNRRLANLLGCCCEG--DERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~--~~~~l  130 (359)
                      ..|.+.+.||.|+||.||+|... ++..+|+|++...  .......+.+|+.+++.+ +|+||+++++++...  ...++
T Consensus         7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l   86 (337)
T cd07852           7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL   86 (337)
T ss_pred             hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence            35677788899999999999954 6889999988643  223345677899999999 999999999988653  36899


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      ||||+++ +|..++..   ..+++..+..++.||+.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus        87 v~e~~~~-~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~-~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~  161 (337)
T cd07852          87 VFEYMET-DLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSG-NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE  161 (337)
T ss_pred             Eeccccc-CHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence            9999975 89998853   3789999999999999999999999 99999999999999999999999999987653322


Q ss_pred             ---------CcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhh----------------
Q 018244          211 ---------SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN----------------  264 (359)
Q Consensus       211 ---------~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~----------------  264 (359)
                               ...++..|+|||.+.+ ..++.++||||||+++|+|++|+.||............                
T Consensus       162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (337)
T cd07852         162 ENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIK  241 (337)
T ss_pred             ccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHH
Confidence                     2356788999998765 45788999999999999999999888643211110000                


Q ss_pred             ---hhhhcccccc------CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          265 ---IQTLTDSCLE------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       265 ---~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                         ...+......      .......+.++.+++.+||+.||++|||+.++++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         242 SPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             hhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence               0000000000      00112246789999999999999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=8.3e-39  Score=295.30  Aligned_cols=279  Identities=14%  Similarity=0.211  Sum_probs=206.3

Q ss_pred             CcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCC------c
Q 018244           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD------E  127 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~  127 (359)
                      ..|.+++.||.|+||.||+|. ..++..||||.+......  ....+.+|+++|+.++|+||+++++++....      .
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   94 (343)
T cd07880          15 DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHD   94 (343)
T ss_pred             cceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccce
Confidence            457788999999999999998 557889999998653222  2346789999999999999999999887654      3


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      .++||||+ +++|.+++.   ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++....
T Consensus        95 ~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~-gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~  169 (343)
T cd07880          95 FYLVMPFM-GTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQTD  169 (343)
T ss_pred             EEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence            58999999 668988874   45789999999999999999999999 99999999999999999999999999988654


Q ss_pred             CCC-CcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh-------------------
Q 018244          208 DGR-SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-------------------  266 (359)
Q Consensus       208 ~~~-~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~-------------------  266 (359)
                      ... ...++..|+|||.+.+ ..++.++|+||||+++|+|++|..||..............                   
T Consensus       170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (343)
T cd07880         170 SEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAK  249 (343)
T ss_pred             cCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHH
Confidence            432 3456889999999876 3588899999999999999999988865422111000000                   


Q ss_pred             hhcccc--c-c---CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHhhhcccC-CccccchhHHHHHHhhcc
Q 018244          267 TLTDSC--L-E---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQKDTEV-SCFLFSSQFTYALLRLHI  337 (359)
Q Consensus       267 ~~~~~~--~-~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~--L~~~~~~~~~-~~~~~~~~~~~~~~~~~~  337 (359)
                      ......  . .   .......+.++.+++.+|++.||++|||+.+++.+  ++........ ...+............++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (343)
T cd07880         250 NYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPEDETEAPPYDDSFDEVDQSLEE  329 (343)
T ss_pred             HHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCcccccCCCCccccHHhhccchHH
Confidence            000000  0 0   00112345679999999999999999999999953  5554332222 222233333334444455


Q ss_pred             ccc
Q 018244          338 WSS  340 (359)
Q Consensus       338 ~~~  340 (359)
                      |.+
T Consensus       330 ~~~  332 (343)
T cd07880         330 WKR  332 (343)
T ss_pred             HHH
Confidence            543

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=3.9e-39  Score=297.46  Aligned_cols=248  Identities=16%  Similarity=0.221  Sum_probs=192.6

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeC----------
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG----------  125 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----------  125 (359)
                      ..|.+.+.||.|+||.||+|.. .++..||+|.+........+.+.+|+++++.++||||+++++++...          
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            4678888899999999999985 56889999999776655567788999999999999999999876543          


Q ss_pred             ----CcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC-CCCCeEEecc
Q 018244          126 ----DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCF  200 (359)
Q Consensus       126 ----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~-~~~~~kl~DF  200 (359)
                          ...++||||+.+ +|.+++.   ...+++..+..++.|++.||.|||+. |++|+||||+||+++ +++.++|+||
T Consensus        85 ~~~~~~~~lv~e~~~~-~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~-givH~dikp~Nili~~~~~~~kl~df  159 (342)
T cd07854          85 LTELNSVYIVQEYMET-DLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANVFINTEDLVLKIGDF  159 (342)
T ss_pred             ccccceEEEEeecccc-cHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEcCCCceEEECCc
Confidence                357899999974 8988873   45689999999999999999999999 999999999999997 4567899999


Q ss_pred             CCcccCCCC-------CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhh-----
Q 018244          201 GLMKNSRDG-------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT-----  267 (359)
Q Consensus       201 g~a~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~-----  267 (359)
                      |.+......       ....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...............     
T Consensus       160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  239 (342)
T cd07854         160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR  239 (342)
T ss_pred             ccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence            998764322       12346778999998764 45788999999999999999999988643211111000000     


Q ss_pred             --------------hccccccCC-----CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          268 --------------LTDSCLEGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       268 --------------~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                    .........     .....+.++.+|+.+||+.||++|||+.+++.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  300 (342)
T cd07854         240 EEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH  300 (342)
T ss_pred             hHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence                          000000000     012345778999999999999999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=6.2e-39  Score=289.02  Aligned_cols=250  Identities=18%  Similarity=0.212  Sum_probs=198.0

Q ss_pred             ccccccCCCCCCcEEEEEEe----CCCcEEEEEEeCCCCC----chHHHHHHHHHHHhcC-CCcccccccceeeeCCcce
Q 018244           59 ENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW----PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  129 (359)
                      |.+.+.||.|++|.||++..    .++..||||.+.....    ...+.+.+|++++..+ +|+||+++++.+..+...+
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~   81 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH   81 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence            56778889999999999974    3567899999875321    2234578899999999 5999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +||||+++|+|.+++.  ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus        82 lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~-~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  158 (288)
T cd05583          82 LILDYVNGGELFTHLY--QREHFTESEVRVYIAEIVLALDHLHQL-GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE  158 (288)
T ss_pred             EEEecCCCCcHHHHHh--hcCCcCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence            9999999999999986  345689999999999999999999999 9999999999999999999999999998764432


Q ss_pred             C-----CcCCCccccCcccccCCC--CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHH
Q 018244          210 R-----SYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       210 ~-----~~~~t~~y~aPE~~~~~~--~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                      .     ...++..|+|||.+.+..  .+.++||||||+++|+|++|..|+...................  ....+...+
T Consensus       159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  236 (288)
T cd05583         159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS--KPPFPKTMS  236 (288)
T ss_pred             cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc--CCCCCcccC
Confidence            2     234688999999987655  7889999999999999999998875322111111111111111  112234456


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      ..+.+++.+||+.||++|||+.++.+.|...
T Consensus       237 ~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~  267 (288)
T cd05583         237 AEARDFIQKLLEKDPKKRLGANGADEIKNHP  267 (288)
T ss_pred             HHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence            7899999999999999999988887766553

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.2e-38  Score=294.11  Aligned_cols=253  Identities=15%  Similarity=0.221  Sum_probs=195.3

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCC------c
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD------E  127 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~  127 (359)
                      ..|.+...||.|+||.||+|.. .++..||+|.+.....  .....+.+|+++++.++|+||+++++++....      .
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            4677788889999999999994 5688999999875422  22346789999999999999999999986543      4


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      .++|+||+.. +|..++    ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||+++...
T Consensus        95 ~~lv~e~~~~-~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~  168 (342)
T cd07879          95 FYLVMPYMQT-DLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSA-GIIHRDLKPGNLAVNEDCELKILDFGLARHAD  168 (342)
T ss_pred             EEEEeccccc-CHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEeeCCCCcCCC
Confidence            5899999965 676654    23589999999999999999999999 99999999999999999999999999987654


Q ss_pred             CC-CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh-------------------
Q 018244          208 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-------------------  266 (359)
Q Consensus       208 ~~-~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~-------------------  266 (359)
                      .. ....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||..............                   
T Consensus       169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (342)
T cd07879         169 AEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAK  248 (342)
T ss_pred             CCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchH
Confidence            33 23456788999999876 4588899999999999999999999875432111110000                   


Q ss_pred             hhc---cccccCC---CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHhhh
Q 018244          267 TLT---DSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQK  315 (359)
Q Consensus       267 ~~~---~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~--L~~~~~  315 (359)
                      ...   .......   ..+..+.++.+|+.+||+.||++|||+.+++.+  ++...+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         249 SYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             HHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence            000   0000000   001245678999999999999999999999965  666654

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-38  Score=285.12  Aligned_cols=248  Identities=22%  Similarity=0.263  Sum_probs=196.4

Q ss_pred             ccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      |.+.+.||+|++|.||+|+.. +++.+|+|.+....  ....+.+.+|+.+++.++|+|++++++++......++||||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            455677899999999999954 58899999998753  223456788999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----C
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----~  211 (359)
                      .+ +|.+++... ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.+.......    .
T Consensus        81 ~~-~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~  157 (282)
T cd07829          81 DM-DLKKYLDKR-PGPLSPNLIKSIMYQLLRGLAYCHSH-RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTH  157 (282)
T ss_pred             Cc-CHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCc
Confidence            74 899999642 24799999999999999999999999 99999999999999999999999999987654332    2


Q ss_pred             cCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhh--------------------cc
Q 018244          212 YSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL--------------------TD  270 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~--------------------~~  270 (359)
                      ..++..|+|||.+.+. .++.++||||||+++|+|++|..||................                    ..
T Consensus       158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (282)
T cd07829         158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFP  237 (282)
T ss_pred             cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccccc
Confidence            3346789999998776 78899999999999999999988876543221111100000                    00


Q ss_pred             ccccC---CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          271 SCLEG---QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       271 ~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .....   ......+..+.+++.+||..||++||++.+++..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  279 (282)
T cd07829         238 KFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH  279 (282)
T ss_pred             ccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence            00000   0011236789999999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=1.3e-38  Score=288.82  Aligned_cols=250  Identities=21%  Similarity=0.235  Sum_probs=192.7

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCC-------
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD-------  126 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-------  126 (359)
                      ..|.+.+.||.|+||.||+|... +++.||+|.+.....  .....+.+|+++++.++|||++++++++.+..       
T Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~   86 (302)
T cd07864           7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKK   86 (302)
T ss_pred             hhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccc
Confidence            45677788899999999999964 588999999975432  22345778999999999999999999987654       


Q ss_pred             ---cceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCc
Q 018244          127 ---ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (359)
Q Consensus       127 ---~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a  203 (359)
                         ..++|+||+++ ++.+++.. ....+++..+..++.|++.||+|||+. +++|+||||+||++++++.+||+|||++
T Consensus        87 ~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~nili~~~~~~kl~dfg~~  163 (302)
T cd07864          87 DKGAFYLVFEYMDH-DLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKK-NFLHRDIKCSNILLNNKGQIKLADFGLA  163 (302)
T ss_pred             cCCcEEEEEcccCc-cHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCcEEeCccccc
Confidence               78999999986 77777754 345789999999999999999999999 9999999999999999999999999998


Q ss_pred             ccCCCCC-----CcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccc-----
Q 018244          204 KNSRDGR-----SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC-----  272 (359)
Q Consensus       204 ~~~~~~~-----~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~-----  272 (359)
                      .......     ...++..|+|||.+.+. .++.++||||||+++|+|++|+.||..................+.     
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (302)
T cd07864         164 RLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWP  243 (302)
T ss_pred             ccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence            8654332     12346789999988654 478899999999999999999988764322111100000000000     


Q ss_pred             ------cc----------C---CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          273 ------LE----------G---QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       273 ------~~----------~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                            ..          .   ......+..+.+++.+||+.||++|||+.+++..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  299 (302)
T cd07864         244 DVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS  299 (302)
T ss_pred             cccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                  00          0   0011246789999999999999999999998853

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-38  Score=279.04  Aligned_cols=232  Identities=22%  Similarity=0.243  Sum_probs=194.0

Q ss_pred             CCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc---hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCH
Q 018244           65 HGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (359)
Q Consensus        65 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL  140 (359)
                      ||.|+||.||++... ++..+|+|.+......   ....+.+|+++++.++|+||+++++.+..+...++||||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            599999999999954 5889999998765432   345788999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CCcCCCc
Q 018244          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNL  216 (359)
Q Consensus       141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~~~~t~  216 (359)
                      .+++..  ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......    ....++.
T Consensus        81 ~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~-~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~  157 (250)
T cd05123          81 FSHLSK--EGRFSEERARFYAAEIVLALEYLHSL-GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP  157 (250)
T ss_pred             HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence            999963  34689999999999999999999998 9999999999999999999999999998765442    2445678


Q ss_pred             cccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccC
Q 018244          217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE  296 (359)
Q Consensus       217 ~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  296 (359)
                      .|+|||...+...+.++|+||||+++|++++|..||..............      .....+...+..+.+++.+||..|
T Consensus       158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~i~~~l~~~  231 (250)
T cd05123         158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK------DPLRFPEFLSPEARDLISGLLQKD  231 (250)
T ss_pred             cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc------CCCCCCCCCCHHHHHHHHHHhcCC
Confidence            99999999888889999999999999999999988865433222211111      112234445778999999999999


Q ss_pred             CCCCCCHHH
Q 018244          297 PRERPNPRS  305 (359)
Q Consensus       297 p~~Rps~~~  305 (359)
                      |++|||+.+
T Consensus       232 p~~R~~~~~  240 (250)
T cd05123         232 PTKRLGSGG  240 (250)
T ss_pred             HhhCCCccc
Confidence            999999943

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=2.4e-38  Score=280.80  Aligned_cols=245  Identities=16%  Similarity=0.191  Sum_probs=195.5

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC-----CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA-----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      .|.+.+.||+|+||.||++... .+..+++|.++...     ......+..|+.+++.++||||+++++++.+....++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            3667788999999999999854 34446666655321     12234567899999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          132 AEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      |||+++++|.+++..  .....+++..+..++.|++.||.|||+. +++|+||+|+||++++ +.++|+|||++......
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~  158 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR-RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS  158 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc-CccccCCChhheEeec-CCEeecccCceeecCCC
Confidence            999999999988863  2345789999999999999999999999 9999999999999975 57999999998765332


Q ss_pred             ----CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       210 ----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                          ....++..|+|||.+.+..++.++|+||||+++|+|++|..|+..............     ......+...+.++
T Consensus       159 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  233 (260)
T cd08222         159 CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE-----GPTPSLPETYSRQL  233 (260)
T ss_pred             cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc-----CCCCCCcchhcHHH
Confidence                234567899999999888889999999999999999999998865432222211111     11222345667889


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHH
Q 018244          286 VRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+++.+||+.||++||++.++++.
T Consensus       234 ~~li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         234 NSIMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             HHHHHHHhcCChhhCcCHHHHhhC
Confidence            999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=2e-38  Score=291.99  Aligned_cols=249  Identities=18%  Similarity=0.176  Sum_probs=192.8

Q ss_pred             Cccccc-ccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCch--------------HHHHHHHHHHHhcCCCcccccccc
Q 018244           57 AMENIV-SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--------------ARQFLEEARAVGQLRNRRLANLLG  120 (359)
Q Consensus        57 ~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~h~niv~~~~  120 (359)
                      ..|..+ +.||.|+||+||+|.. .+++.||||.+.......              ...+.+|+++++.++|+||+++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            345544 4589999999999994 468899999987543221              124678999999999999999999


Q ss_pred             eeeeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEecc
Q 018244          121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF  200 (359)
Q Consensus       121 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DF  200 (359)
                      ++...+..++||||+. |+|.+++.  ....+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+||
T Consensus        88 ~~~~~~~~~lv~e~~~-~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~-~i~H~dl~~~nill~~~~~~kl~df  163 (335)
T PTZ00024         88 VYVEGDFINLVMDIMA-SDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKW-YFMHRDLSPANIFINSKGICKIADF  163 (335)
T ss_pred             EEecCCcEEEEEeccc-cCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccccHHHeEECCCCCEEECCc
Confidence            9999999999999997 58999886  345689999999999999999999999 9999999999999999999999999


Q ss_pred             CCcccCCCC------------------CCcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchhHHHh
Q 018244          201 GLMKNSRDG------------------RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR  261 (359)
Q Consensus       201 g~a~~~~~~------------------~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~~~~~  261 (359)
                      |++......                  ....++..|+|||.+.+.. ++.++||||||+++|+|++|..||.........
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~  243 (335)
T PTZ00024        164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL  243 (335)
T ss_pred             cceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            998755410                  1123467899999987644 688999999999999999999888654322111


Q ss_pred             hhhhhhhccccc---------------cC-------CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          262 DRNIQTLTDSCL---------------EG-------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       262 ~~~~~~~~~~~~---------------~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .........+..               ..       ......+.++.+++.+||+.+|++|||+.+++.+
T Consensus       244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~  313 (335)
T PTZ00024        244 GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH  313 (335)
T ss_pred             HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence            111000000000               00       0012245779999999999999999999999863

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-39  Score=299.91  Aligned_cols=240  Identities=19%  Similarity=0.212  Sum_probs=200.0

Q ss_pred             CCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      .+..|.+...+|.|+|+.|-.+. ..+++..++|++....    ....+|+.++... +||||+++.+.+.++.+.|+||
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~  395 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM  395 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence            46778888899999999999998 5567889999998762    2234577665555 6999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee-CCCCCeEEeccCCcccCCCCC-
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF-DDDVNPRLSCFGLMKNSRDGR-  210 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll-~~~~~~kl~DFg~a~~~~~~~-  210 (359)
                      |++.|+-+.+.+..  ..... ..+..|+.+|+.|+.|||.+ |+||||+||+|||+ ++.++++|+|||.++...... 
T Consensus       396 e~l~g~ell~ri~~--~~~~~-~e~~~w~~~lv~Av~~LH~~-gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~  471 (612)
T KOG0603|consen  396 ELLDGGELLRRIRS--KPEFC-SEASQWAAELVSAVDYLHEQ-GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCD  471 (612)
T ss_pred             hhccccHHHHHHHh--cchhH-HHHHHHHHHHHHHHHHHHhc-CeeecCCChhheeecCCCCcEEEEEechhhhCchhhc
Confidence            99999988887753  22233 77888999999999999998 99999999999999 589999999999998877662 


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ...-|..|.|||++....|++++||||||++||+|++|+.||.....+       ..+......+.+....+..+++|+.
T Consensus       472 tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~s~~vS~~AKdLl~  544 (612)
T KOG0603|consen  472 TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKFSECVSDEAKDLLQ  544 (612)
T ss_pred             ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCCccccccCHHHHHHHH
Confidence            224578999999999889999999999999999999999998776554       1122222233445778899999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~  309 (359)
                      +||+.||.+||++.++...
T Consensus       545 ~LL~~dP~~Rl~~~~i~~h  563 (612)
T KOG0603|consen  545 QLLQVDPALRLGADEIGAH  563 (612)
T ss_pred             HhccCChhhCcChhhhccC
Confidence            9999999999999999865

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.3e-38  Score=291.54  Aligned_cols=255  Identities=17%  Similarity=0.229  Sum_probs=195.3

Q ss_pred             HHHHHHhcCCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceee
Q 018244           47 ETLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCC  123 (359)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~  123 (359)
                      .++...+   ..|.+++.||+|+||.||+|. ..++..||+|++.....  ...+.+.+|+.+++.++|+||+++++++.
T Consensus        10 ~~~~~~~---~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~   86 (345)
T cd07877          10 KTIWEVP---ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT   86 (345)
T ss_pred             HHHhhcc---CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence            3444444   445677788999999999998 45788999999975422  22456788999999999999999999886


Q ss_pred             eC------CcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEE
Q 018244          124 EG------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL  197 (359)
Q Consensus       124 ~~------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl  197 (359)
                      ..      ...+++++++ +++|.+++.   ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|
T Consensus        87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~~~kl  161 (345)
T cd07877          87 PARSLEEFNDVYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKI  161 (345)
T ss_pred             ecccccccccEEEEehhc-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEEcCCCCEEE
Confidence            43      3467888887 678988874   34689999999999999999999999 9999999999999999999999


Q ss_pred             eccCCcccCCCCC-CcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh---------
Q 018244          198 SCFGLMKNSRDGR-SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ---------  266 (359)
Q Consensus       198 ~DFg~a~~~~~~~-~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~---------  266 (359)
                      +|||++....... ...++..|+|||.+.+ ..++.++||||||+++|+|++|+.||+.............         
T Consensus       162 ~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  241 (345)
T cd07877         162 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL  241 (345)
T ss_pred             ecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence            9999988654433 3467889999998876 4688899999999999999999988864322111000000         


Q ss_pred             ----------hhc---cccccCC---CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          267 ----------TLT---DSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       267 ----------~~~---~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                ...   .......   .....+.++.+++.+||+.||++|||+.+++.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         242 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             HhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence                      000   0000000   001235678999999999999999999999976

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=8.7e-39  Score=295.22  Aligned_cols=249  Identities=18%  Similarity=0.230  Sum_probs=196.2

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeCCc-----
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE-----  127 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-----  127 (359)
                      ...|.++..||.|++|.||+|.. .++..||+|++....  ....+.+.+|+.+++.++|+|++++.+++...+.     
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ   93 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence            45678888899999999999995 467899999987532  2234567889999999999999999998876554     


Q ss_pred             -ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          128 -RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       128 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                       .++|+||+ +++|.+++.   ...+++..+..++.|++.||.|||+. |++|+||||+||++++++.++|+|||++...
T Consensus        94 ~~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~-gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~  168 (343)
T cd07851          94 DVYLVTHLM-GADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCELKILDFGLARHT  168 (343)
T ss_pred             cEEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCCEEEccccccccc
Confidence             89999998 569999884   35799999999999999999999999 9999999999999999999999999998865


Q ss_pred             CCC-CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhh----------------
Q 018244          207 RDG-RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL----------------  268 (359)
Q Consensus       207 ~~~-~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~----------------  268 (359)
                      ... ....++..|+|||.+.+. .++.++||||||+++|+|++|+.||................                
T Consensus       169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  248 (343)
T cd07851         169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESA  248 (343)
T ss_pred             cccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhH
Confidence            433 344678889999998653 57889999999999999999999886543221111100000                


Q ss_pred             ---ccccc---cCC---CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          269 ---TDSCL---EGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       269 ---~~~~~---~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                         .....   ...   .....+.++.+++.+||+.||++|||+.+++.+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h  298 (343)
T cd07851         249 RNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH  298 (343)
T ss_pred             HHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence               00000   000   011236789999999999999999999999874

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=2.3e-38  Score=288.24  Aligned_cols=250  Identities=18%  Similarity=0.231  Sum_probs=190.9

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCch--HHHHHHHHHHHhcCCCcccccccceeeeCC------
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGD------  126 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------  126 (359)
                      ..+|.+++.||.|+||.||+|.. .++..+|+|.+.......  ...+.+|+++++.++|+||+++++++....      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            45788899999999999999995 468899999986543221  345678999999999999999999875543      


Q ss_pred             --cceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          127 --ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       127 --~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                        .+++|+||+.+ +|...+.. ....+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++.
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~  163 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHEN-HILHRDIKAANILIDNQGILKIADFGLAR  163 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEECcCccch
Confidence              46999999976 67776653 345799999999999999999999999 99999999999999999999999999987


Q ss_pred             cCCCCC---------------CcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhh-
Q 018244          205 NSRDGR---------------SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT-  267 (359)
Q Consensus       205 ~~~~~~---------------~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~-  267 (359)
                      ......               ...++..|+|||.+.+. .++.++||||||+++|+|++|..||............... 
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~  243 (311)
T cd07866         164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC  243 (311)
T ss_pred             hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            543221               12346789999988754 4889999999999999999999887643222111110000 


Q ss_pred             ----------------hccccccCCCC-------hHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          268 ----------------LTDSCLEGQFS-------SDEGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       268 ----------------~~~~~~~~~~~-------~~~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                                      ..........+       ......+.+++.+||..||++|||+.+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence                            00000000000       123367899999999999999999999875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=8.3e-40  Score=295.55  Aligned_cols=239  Identities=21%  Similarity=0.235  Sum_probs=201.3

Q ss_pred             ccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCC
Q 018244           63 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs  139 (359)
                      +.||+|-||+||-|+ .++|+.||||++.+-...  ...++++|+.+|+.+.||.||.+...|++++.+|.|||-+.|. 
T Consensus       570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD-  648 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD-  648 (888)
T ss_pred             hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch-
Confidence            457999999999999 567999999999865432  3467899999999999999999999999999999999999764 


Q ss_pred             HhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC---CCeEEeccCCcccCCCC---CCcC
Q 018244          140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDG---RSYS  213 (359)
Q Consensus       140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~---~~~kl~DFg~a~~~~~~---~~~~  213 (359)
                      ....+...+.+.+++.....++.||+.||.|||.+ +|+|+||||+|||+.+.   ..+||||||+|+.....   ...+
T Consensus       649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k-nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVV  727 (888)
T KOG4236|consen  649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFK-NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVV  727 (888)
T ss_pred             HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc-ceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhc
Confidence            55555555788999999999999999999999999 99999999999999643   57999999999998765   4678


Q ss_pred             CCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcc--hhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH--ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       214 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ||+.|+|||+++...|+.+-|+||.|||+|.-++|..||..+  ..+.+.+..+..      ......+.+..+.+||..
T Consensus       728 GTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMy------Pp~PW~eis~~AidlIn~  801 (888)
T KOG4236|consen  728 GTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMY------PPNPWSEISPEAIDLINN  801 (888)
T ss_pred             CCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhcccccc------CCCchhhcCHHHHHHHHH
Confidence            999999999999999999999999999999999999888654  222222222211      112235678899999999


Q ss_pred             hcccCCCCCCCHHHHHHH
Q 018244          292 CLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~  309 (359)
                      +|+..-.+|.|.+..+.+
T Consensus       802 LLqVkm~kRysvdk~lsh  819 (888)
T KOG4236|consen  802 LLQVKMRKRYSVDKSLSH  819 (888)
T ss_pred             HHHHHHHHhcchHhhccc
Confidence            999999999999887653

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=5.1e-38  Score=288.21  Aligned_cols=247  Identities=17%  Similarity=0.255  Sum_probs=193.3

Q ss_pred             cccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeee-CCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e  133 (359)
                      .|.+++.||.|+||.||+|. ..++..||+|.+....  ....+.+.+|+++++.++||||+++.+++.. ....++++|
T Consensus        11 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e   90 (328)
T cd07856          11 RYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTE   90 (328)
T ss_pred             ceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEee
Confidence            46778888999999999998 4478899999886432  2234567889999999999999999999865 457899999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-CCc
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY  212 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-~~~  212 (359)
                      |+ +++|.+++.   ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.+...... ...
T Consensus        91 ~~-~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~-~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~  165 (328)
T cd07856          91 LL-GTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGY  165 (328)
T ss_pred             hh-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEeECCCCCEEeCccccccccCCCcCCC
Confidence            98 458988873   45688899999999999999999999 9999999999999999999999999998765433 234


Q ss_pred             CCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhh-------------------hhhhhhcccc
Q 018244          213 STNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-------------------RNIQTLTDSC  272 (359)
Q Consensus       213 ~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~-------------------~~~~~~~~~~  272 (359)
                      .++..|+|||.+.+ ..++.++||||||+++|+|++|..||+.........                   ..........
T Consensus       166 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (328)
T cd07856         166 VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSL  245 (328)
T ss_pred             cccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhc
Confidence            56788999998876 468999999999999999999998886542211000                   0000000000


Q ss_pred             -ccCCCC-----hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          273 -LEGQFS-----SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       273 -~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                       .....+     ...+..+.+++.+||+.+|++|||+.+++..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         246 PKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             cccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence             000011     2245789999999999999999999999876

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=7.1e-39  Score=299.35  Aligned_cols=254  Identities=19%  Similarity=0.221  Sum_probs=196.1

Q ss_pred             ccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeeeCC------cceEEE
Q 018244           61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD------ERLLVA  132 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~~lv~  132 (359)
                      .-+.||+||||.||+|+ ..+|..||||.++... ....+.+.+|+++|++++|+|||+++++=.+..      ...+||
T Consensus        17 ~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvm   96 (732)
T KOG4250|consen   17 MDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVM   96 (732)
T ss_pred             ehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEE
Confidence            34567999999999999 6689999999998743 344677899999999999999999998765543      468999


Q ss_pred             ecCCCCCHhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC--CCC--CeEEeccCCcccCC
Q 018244          133 EYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDV--NPRLSCFGLMKNSR  207 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~--~~~--~~kl~DFg~a~~~~  207 (359)
                      |||.+|+|...+.+.+ ...+++..++.++.++..||.|||.+ ||+||||||.||++-  .+|  ..||+|||.|+..+
T Consensus        97 EyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn-~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~  175 (732)
T KOG4250|consen   97 EYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN-GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELD  175 (732)
T ss_pred             eecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCcEEEeecCCCceEEeeecccccccCC
Confidence            9999999999997643 45799999999999999999999999 999999999999994  223  48999999999988


Q ss_pred             CCC---CcCCCccccCccccc-CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHH-----Hhh----hhhhhhc--ccc
Q 018244          208 DGR---SYSTNLAFTPPEYLR-TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-----IRD----RNIQTLT--DSC  272 (359)
Q Consensus       208 ~~~---~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~-----~~~----~~~~~~~--~~~  272 (359)
                      ++.   +..||..|.+||... .+.|+..+|.|||||++|++.||..||-......     +..    ......+  ...
T Consensus       176 d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~  255 (732)
T KOG4250|consen  176 DNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEE  255 (732)
T ss_pred             CCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecc
Confidence            775   567999999999998 4789999999999999999999999985432221     000    0000000  000


Q ss_pred             cc------C--CCC----hHHHHHHHHHHHHhcccCCCCCC--CHHHHHHHHHHhhh
Q 018244          273 LE------G--QFS----SDEGTELVRLASRCLQYEPRERP--NPRSLVTALVTLQK  315 (359)
Q Consensus       273 ~~------~--~~~----~~~~~~l~~li~~cl~~dp~~Rp--s~~~il~~L~~~~~  315 (359)
                      ..      .  +++    ......+...+..+|..+|.+|-  .+.+....+..+-.
T Consensus       256 eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~  312 (732)
T KOG4250|consen  256 ENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN  312 (732)
T ss_pred             cCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence            00      0  111    22334566778888999999998  66666655555443

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=6.4e-38  Score=288.21  Aligned_cols=247  Identities=18%  Similarity=0.231  Sum_probs=189.3

Q ss_pred             ccccccCCCCCCcEEEEEEeC-C--CcEEEEEEeCCCC--CchHHHHHHHHHHHhcC-CCcccccccceeeeC----Ccc
Q 018244           59 ENIVSEHGEKAPNVVYKGKLE-N--QFRIAVKRFNRSA--WPDARQFLEEARAVGQL-RNRRLANLLGCCCEG----DER  128 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~----~~~  128 (359)
                      |.+.+.||.|+||.||++... .  +..||+|.+....  ....+.+.+|+.+++.+ .|+||+++++.+...    ...
T Consensus         2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~   81 (332)
T cd07857           2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL   81 (332)
T ss_pred             ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence            567788899999999999953 4  7789999987532  12245678899999999 599999999875432    457


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      ++++||+. ++|.+++.  ....+++..+..++.||+.||.|||+. +++|+||||+||++++++.++|+|||++.....
T Consensus        82 ~~~~e~~~-~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~  157 (332)
T cd07857          82 YLYEELME-ADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSA-NVLHRDLKPGNLLVNADCELKICDFGLARGFSE  157 (332)
T ss_pred             EEEEeccc-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence            88899986 58998886  455789999999999999999999999 999999999999999999999999999875432


Q ss_pred             C--------CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh-----------h-
Q 018244          209 G--------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-----------T-  267 (359)
Q Consensus       209 ~--------~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~-----------~-  267 (359)
                      .        ....++..|+|||.+.+ ..++.++||||+|+++|+|++|..||..............           . 
T Consensus       158 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (332)
T cd07857         158 NPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRI  237 (332)
T ss_pred             ccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence            2        22357889999998765 4588999999999999999999988765322111110000           0 


Q ss_pred             -------h---cccccc---CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          268 -------L---TDSCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       268 -------~---~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                             .   ......   .......+..+.+++.+||+.||++|||+.+++..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~  292 (332)
T cd07857         238 GSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH  292 (332)
T ss_pred             hhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence                   0   000000   00111235689999999999999999999999854

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=4e-40  Score=274.81  Aligned_cols=247  Identities=18%  Similarity=0.214  Sum_probs=197.1

Q ss_pred             cccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEecCC
Q 018244           60 NIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        60 ~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      +-++.||.|+||+|+|-. .+.|+..|||++..... ...++++.|.+...+- +.||||+++|.+-..+..||.||+|+
T Consensus        67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd  146 (361)
T KOG1006|consen   67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD  146 (361)
T ss_pred             HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence            345678999999999998 56799999999987654 3455688888766555 69999999999988899999999996


Q ss_pred             CCCHhhhhh---cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---C
Q 018244          137 NDTLAKHLF---HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---R  210 (359)
Q Consensus       137 ~gsL~~~l~---~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---~  210 (359)
                      - ||..+-+   ......+++..+-+|....+.||.||.....|+|||+||+|||++..|.+||||||++....+.   +
T Consensus       147 ~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT  225 (361)
T KOG1006|consen  147 I-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKT  225 (361)
T ss_pred             h-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhh
Confidence            5 6655443   2356679999999999999999999998779999999999999999999999999998765432   3


Q ss_pred             CcCCCccccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCC---hHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS---SDEGTEL  285 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l  285 (359)
                      ..+|-..|||||.+..  ..|+-++||||||++|||+.||..|+  ..|+...++..+...........+   .+.+..+
T Consensus       226 ~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPy--r~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~  303 (361)
T KOG1006|consen  226 VDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPY--RKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSM  303 (361)
T ss_pred             hccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCc--chHHHHHHHHHHHHcCCCCeecCcccccccCHHH
Confidence            4567789999999874  34899999999999999999999554  444444444433332221111222   3478899


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHH
Q 018244          286 VRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ..++.-||.+|-+.||...+++..
T Consensus       304 ~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  304 VRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             HHHHHHHhhcccccCcchhhhhcC
Confidence            999999999999999999998764

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.5e-40  Score=272.14  Aligned_cols=252  Identities=17%  Similarity=0.232  Sum_probs=195.3

Q ss_pred             CcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeC--------
Q 018244           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG--------  125 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--------  125 (359)
                      +.|..+.++|+|.||.||+|+ .+.|+.||+|++-..+..  -.....+|+++|..|+|+|++.+++.|...        
T Consensus        17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r   96 (376)
T KOG0669|consen   17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR   96 (376)
T ss_pred             hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence            457778888999999999999 455778999877543321  234568899999999999999999988643        


Q ss_pred             CcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCccc
Q 018244          126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (359)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~  205 (359)
                      ..+|+||.+|.. +|..++.+ ....++...+.+++.++..||.|+|++ .|+|||+||+|+||+.+|.+||+|||+++.
T Consensus        97 ~t~ylVf~~ceh-DLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~-kilHRDmKaaNvLIt~dgilklADFGlar~  173 (376)
T KOG0669|consen   97 ATFYLVFDFCEH-DLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRN-KILHRDMKAANVLITKDGILKLADFGLARA  173 (376)
T ss_pred             ceeeeeHHHhhh-hHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHh-hHHhhcccHhhEEEcCCceEEeeccccccc
Confidence            348999999987 79998854 456789999999999999999999999 999999999999999999999999999976


Q ss_pred             CCCCC--------CcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhh-------------
Q 018244          206 SRDGR--------SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-------------  263 (359)
Q Consensus       206 ~~~~~--------~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~-------------  263 (359)
                      +....        ..+.|.+|.+||.+.+.+ |+.+.|||+.|||+.||+|+.+.+++.........             
T Consensus       174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevW  253 (376)
T KOG0669|consen  174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVW  253 (376)
T ss_pred             eecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccC
Confidence            54322        234589999999998764 99999999999999999999988876532211110             


Q ss_pred             ------hhhhhc--cccccCCC--------ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 018244          264 ------NIQTLT--DSCLEGQF--------SSDEGTELVRLASRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       264 ------~~~~~~--~~~~~~~~--------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~  311 (359)
                            .+...+  .+...+.+        +..-.++..+|+.+++..||.+|+++.+++++--
T Consensus       254 P~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~  317 (376)
T KOG0669|consen  254 PNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDF  317 (376)
T ss_pred             CCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhh
Confidence                  000000  00000000        0112347899999999999999999999998643

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.8e-39  Score=282.19  Aligned_cols=238  Identities=19%  Similarity=0.239  Sum_probs=204.2

Q ss_pred             CcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCc---hHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv  131 (359)
                      .+++++..||+|+||.|.+|. ..+.+.+|||+++++...   +.+--+.|-++|... +-|.+++++..|++-+.+|+|
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV  428 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV  428 (683)
T ss_pred             cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence            467788889999999999998 456789999999876322   233345677777766 578999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC----
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----  207 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~----  207 (359)
                      |||+.||+|--.++  .-+.+.+..+..++.+|+-||-+||++ ||++||||.+||++|.+|.+||+|||+++.--    
T Consensus       429 MEyvnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~k-gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~  505 (683)
T KOG0696|consen  429 MEYVNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGV  505 (683)
T ss_pred             EEEecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcC-CeeeeeccccceEeccCCceEeeecccccccccCCc
Confidence            99999999998887  456788999999999999999999999 99999999999999999999999999987532    


Q ss_pred             CCCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          208 DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       208 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                      ...+..||+.|+|||++...+|..++|+|||||+||||+.|++||.++..+.+...+....      -.+|...+.++..
T Consensus       506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehn------vsyPKslSkEAv~  579 (683)
T KOG0696|consen  506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHN------VSYPKSLSKEAVA  579 (683)
T ss_pred             ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHcc------CcCcccccHHHHH
Confidence            2346789999999999999999999999999999999999999999887776665554432      2467888999999


Q ss_pred             HHHHhcccCCCCCCCH
Q 018244          288 LASRCLQYEPRERPNP  303 (359)
Q Consensus       288 li~~cl~~dp~~Rps~  303 (359)
                      +....|.++|.+|...
T Consensus       580 ickg~ltK~P~kRLGc  595 (683)
T KOG0696|consen  580 ICKGLLTKHPGKRLGC  595 (683)
T ss_pred             HHHHHhhcCCccccCC
Confidence            9999999999999643

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-39  Score=281.01  Aligned_cols=250  Identities=16%  Similarity=0.178  Sum_probs=199.5

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-C-c----ccccccceeeeCCcce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-N-R----RLANLLGCCCEGDERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-~----niv~~~~~~~~~~~~~  129 (359)
                      ..|.++..+|+|.||.|-.+.. ..+..||||+++.-. .-.+..+-|+++|+++. + |    -+|.+.++|...++.|
T Consensus        89 ~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC  167 (415)
T KOG0671|consen   89 NRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC  167 (415)
T ss_pred             cceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence            4688899999999999999984 457899999997533 22344667999999993 3 2    3788899999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC------------------
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD------------------  191 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~------------------  191 (359)
                      ||+|.+ |-|+.+++..+.-.+++..++..|++|++.+++|||+. +++|.||||+|||+.+                  
T Consensus       168 ivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~-kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~  245 (415)
T KOG0671|consen  168 IVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL-KLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRP  245 (415)
T ss_pred             EEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc-ceeecCCChheEEEeccceEEEeccCCccceecc
Confidence            999998 55999999887778899999999999999999999999 9999999999999931                  


Q ss_pred             --CCCeEEeccCCcccCCCCC-CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHH---Hhhhhh
Q 018244          192 --DVNPRLSCFGLMKNSRDGR-SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL---IRDRNI  265 (359)
Q Consensus       192 --~~~~kl~DFg~a~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~---~~~~~~  265 (359)
                        +..++|+|||.|+...... ..+.|..|.|||++.+-+++..+||||+||||+||+||...|+.+...+   +.+...
T Consensus       246 ~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIl  325 (415)
T KOG0671|consen  246 LKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERIL  325 (415)
T ss_pred             CCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhh
Confidence              3459999999999877665 4567999999999999999999999999999999999999887653111   111100


Q ss_pred             hh---------------------------------hcccccc----CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          266 QT---------------------------------LTDSCLE----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       266 ~~---------------------------------~~~~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                      ..                                 ..+++.+    -...+.....+.+|+..||..||.+|+|+.|+++
T Consensus       326 Gp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~  405 (415)
T KOG0671|consen  326 GPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS  405 (415)
T ss_pred             CCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence            00                                 0000000    0012345567999999999999999999999987


Q ss_pred             H
Q 018244          309 A  309 (359)
Q Consensus       309 ~  309 (359)
                      +
T Consensus       406 H  406 (415)
T KOG0671|consen  406 H  406 (415)
T ss_pred             C
Confidence            4

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=1e-37  Score=309.88  Aligned_cols=146  Identities=21%  Similarity=0.215  Sum_probs=130.6

Q ss_pred             CCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc---hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      +..|.+++.||.|+||+||+|... ++..||||++......   ....+.+|+.++..++|+||+++++++......+||
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV   82 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV   82 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence            457888999999999999999954 6889999999754322   235688899999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                      |||+.+++|.+++.  ....+++..++.|+.||+.||.|||.+ +|+||||||+|||++.++.+||+|||+++
T Consensus        83 mEy~~g~~L~~li~--~~~~l~~~~~~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          83 MEYLIGGDVKSLLH--IYGYFDEEMAVKYISEVALALDYLHRH-GIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             EeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            99999999999986  345689999999999999999999999 99999999999999999999999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=8.1e-38  Score=273.85  Aligned_cols=219  Identities=19%  Similarity=0.204  Sum_probs=178.4

Q ss_pred             CCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCHhhhhhc
Q 018244           68 KAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH  146 (359)
Q Consensus        68 G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~  146 (359)
                      |.+|.||++.. .+++.+|+|.+....     ...+|...+....||||+++++++...+..++||||+++|+|.+++..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            88999999994 578899999997643     233455555566799999999999999999999999999999999863


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-CCcCCCccccCccccc
Q 018244          147 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLR  225 (359)
Q Consensus       147 ~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-~~~~~t~~y~aPE~~~  225 (359)
                        ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++++|||.+...... ....++..|+|||.+.
T Consensus        79 --~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~  155 (237)
T cd05576          79 --FLNIPEECVKRWAAEMVVALDALHRE-GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGG  155 (237)
T ss_pred             --hcCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccC
Confidence              34689999999999999999999999 9999999999999999999999999987655433 2334567899999998


Q ss_pred             CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHH
Q 018244          226 TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR  304 (359)
Q Consensus       226 ~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~  304 (359)
                      +..++.++|+||+|+++|+|++|..|+.......          ........+...+..+.+++.+||+.||++|||+.
T Consensus       156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~  224 (237)
T cd05576         156 ISEETEACDWWSLGAILFELLTGKTLVECHPSGI----------NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAG  224 (237)
T ss_pred             CCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc----------ccccccCCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence            8889999999999999999999997654321110          00001123344567899999999999999999974

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-37  Score=274.78  Aligned_cols=250  Identities=17%  Similarity=0.229  Sum_probs=193.5

Q ss_pred             ccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC--CCcccccccceeeeCC----cceEEE
Q 018244           59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL--RNRRLANLLGCCCEGD----ERLLVA  132 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~~----~~~lv~  132 (359)
                      -.+++.+|+|.||.||+|.+. |+.||||+|....   ...+.+|.++.+.+  +|+||+.+++.-..++    .++||+
T Consensus       213 I~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvT  288 (513)
T KOG2052|consen  213 IVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVT  288 (513)
T ss_pred             eEEEEEecCccccceeecccc-CCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEee
Confidence            356778899999999999994 5689999998543   46678888877764  9999999998654432    589999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhc-------CCCcccccCCCCCeeeCCCCCeEEeccCCccc
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-------KERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-------~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~  205 (359)
                      +|.+.|||.|||   ....++.....+++..+|.||+|||.       ++.|.|||||..|||+..++...|+|+|+|-.
T Consensus       289 dYHe~GSL~DyL---~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~  365 (513)
T KOG2052|consen  289 DYHEHGSLYDYL---NRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  365 (513)
T ss_pred             ecccCCcHHHHH---hhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence            999999999999   55789999999999999999999996       36799999999999999999999999999865


Q ss_pred             CCC--------CCCcCCCccccCcccccCCC----C-C-CccchhhHHHHHHHHHhCC----------CCCCcc-----h
Q 018244          206 SRD--------GRSYSTNLAFTPPEYLRTGR----V-T-PESVMYSFGTLLLDLLSGK----------HIPPSH-----A  256 (359)
Q Consensus       206 ~~~--------~~~~~~t~~y~aPE~~~~~~----~-~-~~~Di~slG~il~elltg~----------~p~~~~-----~  256 (359)
                      ...        .+..+||.+|||||++...-    + + ..+||||||+|+||+....          .||.+-     .
T Consensus       366 h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs  445 (513)
T KOG2052|consen  366 HDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPS  445 (513)
T ss_pred             ecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCC
Confidence            433        24567999999999987431    2 2 3589999999999997532          233221     2


Q ss_pred             hHHHhhhhhhhhccccccCCC-ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          257 LDLIRDRNIQTLTDSCLEGQF-SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      .+.+++-...+...+...+.+ ..+....+.++|+.||..||.-|.|+--+-..|.++.+
T Consensus       446 ~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  446 FEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             HHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            222222222222222222222 23567788999999999999999999999988888764

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-37  Score=293.72  Aligned_cols=249  Identities=14%  Similarity=0.202  Sum_probs=207.4

Q ss_pred             CCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-CCcccccccceeee-----CCcc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE-----GDER  128 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~-----~~~~  128 (359)
                      -..+.++..+|.|.+|.||+++ .++++..|+|+..... ...+++..|.++|+.. .|||++.++|+|..     ++.+
T Consensus        18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqL   96 (953)
T KOG0587|consen   18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQL   96 (953)
T ss_pred             CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeE
Confidence            3456777788999999999999 6678889999887654 3345678899999998 49999999999864     4689


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      |||||||.+||..++++...+..+.|..+..|++.++.||.+||++ .++|||||-.|||++.++.|||+|||++...+.
T Consensus        97 WLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n-kviHRDikG~NiLLT~e~~VKLvDFGvSaQlds  175 (953)
T KOG0587|consen   97 WLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDS  175 (953)
T ss_pred             EEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc-ceeeecccCceEEEeccCcEEEeeeeeeeeeec
Confidence            9999999999999999987888999999999999999999999999 999999999999999999999999999876553


Q ss_pred             ----CCCcCCCccccCcccccCC-----CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCCh
Q 018244          209 ----GRSYSTNLAFTPPEYLRTG-----RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS  279 (359)
Q Consensus       209 ----~~~~~~t~~y~aPE~~~~~-----~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (359)
                          ..+..||+.|||||++...     .|+..+|+||||++..||.-|.+|+-+..-..   ..+.....+......+.
T Consensus       176 T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr---aLF~IpRNPPPkLkrp~  252 (953)
T KOG0587|consen  176 TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR---ALFLIPRNPPPKLKRPK  252 (953)
T ss_pred             ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh---hhccCCCCCCccccchh
Confidence                3567899999999998743     47888999999999999999997764432111   11222223333333467


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          280 DEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       280 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .++.++.++|..||.+|-++||++.+++++
T Consensus       253 kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  253 KWSKKFNDFISTCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             hHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence            789999999999999999999999998864

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-37  Score=294.40  Aligned_cols=249  Identities=20%  Similarity=0.270  Sum_probs=209.9

Q ss_pred             cccccCCCCCCcEEEEEEe-CCC----cEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           60 NIVSEHGEKAPNVVYKGKL-ENQ----FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        60 ~~~~~lg~G~~g~Vy~~~~-~~~----~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      +..+.||+|+||+||+|.+ +.|    -+||+|++..... +...++++|+-.|.+++|||+++++++|.... +-||++
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq  777 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ  777 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence            4567789999999999984 443    4799999876543 34668999999999999999999999998765 889999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCcC
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS  213 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~~  213 (359)
                      |++.|+|.++++. .+..+-....+.|.+||++||.|||.+ ++|||||-..|||+..-..+|+.|||+++....+....
T Consensus       778 ~mP~G~LlDyvr~-hr~~igsq~lLnw~~QIAkgM~YLe~q-rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey  855 (1177)
T KOG1025|consen  778 LMPLGCLLDYVRE-HRDNIGSQDLLNWCYQIAKGMKYLEEQ-RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY  855 (1177)
T ss_pred             hcccchHHHHHHH-hhccccHHHHHHHHHHHHHHHHHHHhc-chhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence            9999999999986 566788899999999999999999999 99999999999999999999999999999877654322


Q ss_pred             ------CCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          214 ------TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       214 ------~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                            ..+.|||=|.+....|+.++|||||||++||++| |..|+.....+.+     ..++....+...|+.++.++.
T Consensus       856 ~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI-----~dlle~geRLsqPpiCtiDVy  930 (1177)
T KOG1025|consen  856 SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI-----PDLLEKGERLSQPPICTIDVY  930 (1177)
T ss_pred             cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh-----hHHHhccccCCCCCCccHHHH
Confidence                  2357899999999999999999999999999988 6666665544443     333333344556778899999


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          287 RLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      .++.+||..|++.||+++++...+.++.++
T Consensus       931 ~~mvkCwmid~~~rp~fkel~~~fs~~ard  960 (1177)
T KOG1025|consen  931 MVMVKCWMIDADSRPTFKELAEEFSRMARD  960 (1177)
T ss_pred             HHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence            999999999999999999999988887654

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-38  Score=286.51  Aligned_cols=242  Identities=16%  Similarity=0.177  Sum_probs=207.6

Q ss_pred             cCCCcccccccCCCCCCcEEEEEEeCCCc-EEEEEEeCCCCCc---hHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           54 SGFAMENIVSEHGEKAPNVVYKGKLENQF-RIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        54 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~-~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      -.+++.+++..||-|+||.|=++...+.. .+|+|.+++....   ..+.+..|-++|...+.|.||+++..|.+...+|
T Consensus       417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvY  496 (732)
T KOG0614|consen  417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVY  496 (732)
T ss_pred             cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhh
Confidence            34567788999999999999999865543 4999998865333   3456888999999999999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      ++||-|-||.|+..++  +.+.++......++..+++|+.|||++ |||+|||||+|.++|.+|-+||.|||+|+....+
T Consensus       497 mLmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k-~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g  573 (732)
T KOG0614|consen  497 MLMEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRK-GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG  573 (732)
T ss_pred             hhHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhc-CceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence            9999999999999997  677899999999999999999999999 9999999999999999999999999999987765


Q ss_pred             C---CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          210 R---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       210 ~---~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                      .   +++||+.|.|||++.+...+.++|.||||+++|||++|.+||..-......+.++..+-.    -.+|......+.
T Consensus       574 ~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~----i~~Pr~I~k~a~  649 (732)
T KOG0614|consen  574 RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK----IEFPRRITKTAT  649 (732)
T ss_pred             CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh----hhcccccchhHH
Confidence            4   568999999999999999999999999999999999999999876433333333322221    235667778899


Q ss_pred             HHHHHhcccCCCCCCC
Q 018244          287 RLASRCLQYEPRERPN  302 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps  302 (359)
                      +||+++.+.+|.+|..
T Consensus       650 ~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  650 DLIKKLCRDNPTERLG  665 (732)
T ss_pred             HHHHHHHhcCcHhhhc
Confidence            9999999999999975

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-36  Score=295.03  Aligned_cols=247  Identities=21%  Similarity=0.306  Sum_probs=203.0

Q ss_pred             ccCCCCCCcEEEEEEeC--------CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEE
Q 018244           63 SEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      +.||.|+||.|++|...        ....||||.++.... .+.+.+..|+++|+.+ +|+||+.+.|+|...+..++|+
T Consensus       302 ~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~  381 (609)
T KOG0200|consen  302 KYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIV  381 (609)
T ss_pred             ceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEE
Confidence            36799999999999732        145799999986543 3466789999999999 5999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCC------C--------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEe
Q 018244          133 EYMPNDTLAKHLFHWE------T--------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLS  198 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~------~--------~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~  198 (359)
                      ||+..|+|..+++..+      .        ..++....+.+++||+.|++||++. ++|||||-+.|||+..+..+||+
T Consensus       382 Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~-~~vHRDLAaRNVLi~~~~~~kIa  460 (609)
T KOG0200|consen  382 EYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV-PCVHRDLAARNVLITKNKVIKIA  460 (609)
T ss_pred             EeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC-CccchhhhhhhEEecCCCEEEEc
Confidence            9999999999997643      0        2388999999999999999999999 99999999999999999999999


Q ss_pred             ccCCcccCCCCCCc-----CC--CccccCcccccCCCCCCccchhhHHHHHHHHHhCCC-CCCcchhHHHhhhhhhhhcc
Q 018244          199 CFGLMKNSRDGRSY-----ST--NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH-IPPSHALDLIRDRNIQTLTD  270 (359)
Q Consensus       199 DFg~a~~~~~~~~~-----~~--t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~-p~~~~~~~~~~~~~~~~~~~  270 (359)
                      |||+++.......+     .+  ...|||||.+....|+.++||||||++||||+|... |+++-..    ...+...+.
T Consensus       461 DFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~----~~~l~~~l~  536 (609)
T KOG0200|consen  461 DFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP----TEELLEFLK  536 (609)
T ss_pred             cccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc----HHHHHHHHh
Confidence            99999965443322     22  235999999999899999999999999999999554 4443110    111122344


Q ss_pred             ccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 018244          271 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ  314 (359)
Q Consensus       271 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~  314 (359)
                      ...+...|..++.++.++|..||+.+|++||++.++.+.+....
T Consensus       537 ~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l  580 (609)
T KOG0200|consen  537 EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL  580 (609)
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence            44455567778899999999999999999999999999999853

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.7e-37  Score=282.37  Aligned_cols=246  Identities=17%  Similarity=0.194  Sum_probs=194.5

Q ss_pred             HHHHHhcCCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCc---hHHHHHHHHHHHhcCCCcccccccceee
Q 018244           48 TLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCC  123 (359)
Q Consensus        48 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~  123 (359)
                      .|..+--+-+.+..|+.||-|+||.|.++. .++...+|+|.+.+.+.-   ....+..|-+||..-..+=||+++..|.
T Consensus       620 RLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQ  699 (1034)
T KOG0608|consen  620 RLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQ  699 (1034)
T ss_pred             HHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEec
Confidence            334444444567788899999999999998 556778999999865432   2344678999999999999999999999


Q ss_pred             eCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCc
Q 018244          124 EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (359)
Q Consensus       124 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a  203 (359)
                      +.+++|+||+|++||++-++|.  +.+.+.+..+..++.++.+|+++.|.. |+|||||||+|||||.+|.+||+|||++
T Consensus       700 DkdnLYFVMdYIPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkm-GFIHRDiKPDNILIDrdGHIKLTDFGLC  776 (1034)
T KOG0608|consen  700 DKDNLYFVMDYIPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNILIDRDGHIKLTDFGLC  776 (1034)
T ss_pred             cCCceEEEEeccCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhc-cceecccCccceEEccCCceeeeecccc
Confidence            9999999999999999999997  567899999999999999999999999 9999999999999999999999999997


Q ss_pred             ccCC---------CC-------------------------------------CCcCCCccccCcccccCCCCCCccchhh
Q 018244          204 KNSR---------DG-------------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYS  237 (359)
Q Consensus       204 ~~~~---------~~-------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Di~s  237 (359)
                      .-+.         .+                                     ...+||..|+|||++....|+..+|+||
T Consensus       777 TGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws  856 (1034)
T KOG0608|consen  777 TGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWS  856 (1034)
T ss_pred             ccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhH
Confidence            5321         00                                     1236899999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCcchhHHHh--hhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCC
Q 018244          238 FGTLLLDLLSGKHIPPSHALDLIR--DRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP  301 (359)
Q Consensus       238 lG~il~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp  301 (359)
                      .|||||||+.|+.||-...-....  -.+....++-    .+-.+.+.++.+||.+++. +++.|.
T Consensus       857 ~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~----~~~~~ls~e~~~li~kLc~-sad~RL  917 (1034)
T KOG0608|consen  857 VGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHI----PYQGNLSKEALDLIQKLCC-SADSRL  917 (1034)
T ss_pred             hhHHHHHHhhCCCCccCCCCCcceeeeeehhhcccc----ccccccCHHHHHHHHHHhc-Chhhhh
Confidence            999999999999998654321111  1111111111    1224566778888877653 477775

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=3.1e-36  Score=292.61  Aligned_cols=250  Identities=18%  Similarity=0.194  Sum_probs=167.6

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CC----CcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccce------ee
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-EN----QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGC------CC  123 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~------~~  123 (359)
                      ...+|.+.+.||+|+||.||+|+. .+    +..||+|++.....  .+....+  .+....+.+++.+...      ..
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            456788889999999999999995 44    68999999865332  1111111  1222223333333222      23


Q ss_pred             eCCcceEEEecCCCCCHhhhhhcCCCC------------------CCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCC
Q 018244          124 EGDERLLVAEYMPNDTLAKHLFHWETQ------------------PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY  185 (359)
Q Consensus       124 ~~~~~~lv~e~~~~gsL~~~l~~~~~~------------------~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~  185 (359)
                      .....+||+||+.+++|.+++......                  ......+..++.|++.||.|||++ +|+||||||+
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~-gIiHRDLKP~  284 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST-GIVHRDVKPQ  284 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC-CEEeCcCCHH
Confidence            456789999999999999988642110                  112345678999999999999999 9999999999


Q ss_pred             CeeeCC-CCCeEEeccCCcccCCCC-----CCcCCCccccCcccccCC----------------------CCCCccchhh
Q 018244          186 RIVFDD-DVNPRLSCFGLMKNSRDG-----RSYSTNLAFTPPEYLRTG----------------------RVTPESVMYS  237 (359)
Q Consensus       186 NIll~~-~~~~kl~DFg~a~~~~~~-----~~~~~t~~y~aPE~~~~~----------------------~~~~~~Di~s  237 (359)
                      |||++. ++.+||+|||+++.....     ....+++.|+|||.+...                      .++.++||||
T Consensus       285 NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS  364 (566)
T PLN03225        285 NIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS  364 (566)
T ss_pred             HEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence            999985 689999999999865432     345678999999965422                      2345679999


Q ss_pred             HHHHHHHHHhCCCCCCcchhHHHhhh-----hhhh---hccccccCC------CChHHHHHHHHHHHHhcccCCCCCCCH
Q 018244          238 FGTLLLDLLSGKHIPPSHALDLIRDR-----NIQT---LTDSCLEGQ------FSSDEGTELVRLASRCLQYEPRERPNP  303 (359)
Q Consensus       238 lG~il~elltg~~p~~~~~~~~~~~~-----~~~~---~~~~~~~~~------~~~~~~~~l~~li~~cl~~dp~~Rps~  303 (359)
                      |||++|||+++..++..........-     ....   .........      ..........+|+.+||++||++|||+
T Consensus       365 lGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta  444 (566)
T PLN03225        365 AGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISA  444 (566)
T ss_pred             HHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCH
Confidence            99999999997754433221111100     0000   000000000      001112345689999999999999999


Q ss_pred             HHHHHH
Q 018244          304 RSLVTA  309 (359)
Q Consensus       304 ~~il~~  309 (359)
                      .+++++
T Consensus       445 ~e~L~H  450 (566)
T PLN03225        445 KAALAH  450 (566)
T ss_pred             HHHhCC
Confidence            999986

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.9e-37  Score=271.74  Aligned_cols=248  Identities=21%  Similarity=0.270  Sum_probs=197.2

Q ss_pred             cccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCC-CCch------HHHHHHHHHHHhcCCCcccccccceeee-CCcc
Q 018244           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS-AWPD------ARQFLEEARAVGQLRNRRLANLLGCCCE-GDER  128 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~-~~~~------~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~  128 (359)
                      .|-++..||+|||+.||+|- +.....||||+-... ++.+      .+...+|.++.+.|.||.||++++||.- .+.+
T Consensus       464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF  543 (775)
T KOG1151|consen  464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF  543 (775)
T ss_pred             HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence            46677789999999999998 556778999987643 2222      2346789999999999999999999865 4678


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCcccccCCCCCeeeC---CCCCeEEeccCCcc
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-ERALYHDLNAYRIVFD---DDVNPRLSCFGLMK  204 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~ivH~Dikp~NIll~---~~~~~kl~DFg~a~  204 (359)
                      |-|.|||+|.+|.-||+  ....+++..+..|+.||+.||.||... ..|||-||||.|||+.   ..|.+||+|||+++
T Consensus       544 CTVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSK  621 (775)
T KOG1151|consen  544 CTVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSK  621 (775)
T ss_pred             eeeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhh
Confidence            99999999999999997  556789999999999999999999875 5799999999999995   45889999999999


Q ss_pred             cCCCCC-----------CcCCCccccCcccccCC----CCCCccchhhHHHHHHHHHhCCCCCCcchhH--HHhhhhhhh
Q 018244          205 NSRDGR-----------SYSTNLAFTPPEYLRTG----RVTPESVMYSFGTLLLDLLSGKHIPPSHALD--LIRDRNIQT  267 (359)
Q Consensus       205 ~~~~~~-----------~~~~t~~y~aPE~~~~~----~~~~~~Di~slG~il~elltg~~p~~~~~~~--~~~~~~~~~  267 (359)
                      ..+++.           ...||.+|++||.+.-+    +.+.++||||+|||+|.++.|+.||......  .+....+..
T Consensus       622 IMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlk  701 (775)
T KOG1151|consen  622 IMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILK  701 (775)
T ss_pred             hccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhc
Confidence            876542           34689999999988754    3789999999999999999999998654322  222222211


Q ss_pred             hccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       268 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ...  ......+..+.++..+|.+||++.-++|....++...
T Consensus       702 AtE--VqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d  741 (775)
T KOG1151|consen  702 ATE--VQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD  741 (775)
T ss_pred             cee--ccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence            111  1112234577889999999999999999988877643

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=100.00  E-value=4.8e-35  Score=255.84  Aligned_cols=233  Identities=21%  Similarity=0.246  Sum_probs=192.9

Q ss_pred             CCcEEEEEEeC-CCcEEEEEEeCCCCCch-HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCHhhhhhc
Q 018244           69 APNVVYKGKLE-NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH  146 (359)
Q Consensus        69 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~  146 (359)
                      +||.||+|... ++..+|+|++....... .+.+.+|++.++.++|+|++++++++......++++||+.+++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            57899999965 58899999998765444 67889999999999999999999999999999999999999999999864


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---CCcCCCccccCccc
Q 018244          147 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEY  223 (359)
Q Consensus       147 ~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---~~~~~t~~y~aPE~  223 (359)
                        ...+++..+..++.+++.++.|||+. +++|+||+|+||++++++.++|+|||.+......   ....++..|+|||.
T Consensus        81 --~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~  157 (244)
T smart00220       81 --RGRLSEDEARFYARQILSALEYLHSN-GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV  157 (244)
T ss_pred             --ccCCCHHHHHHHHHHHHHHHHHHHHc-CeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence              22389999999999999999999999 9999999999999999999999999998876553   34557789999999


Q ss_pred             ccCCCCCCccchhhHHHHHHHHHhCCCCCCc-chhHHHhhhhhhhhccccccCCCC-hHHHHHHHHHHHHhcccCCCCCC
Q 018244          224 LRTGRVTPESVMYSFGTLLLDLLSGKHIPPS-HALDLIRDRNIQTLTDSCLEGQFS-SDEGTELVRLASRCLQYEPRERP  301 (359)
Q Consensus       224 ~~~~~~~~~~Di~slG~il~elltg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dp~~Rp  301 (359)
                      +.+..++.++||||||+++++|++|..|+.. ............    ........ ...+.++.+++.+||..+|++||
T Consensus       158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp  233 (244)
T smart00220      158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGK----PKPPFPPPEWKISPEAKDLIRKLLVKDPEKRL  233 (244)
T ss_pred             HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhc----cCCCCccccccCCHHHHHHHHHHccCCchhcc
Confidence            9888889999999999999999999988765 222222111111    11100000 11567899999999999999999


Q ss_pred             CHHHHHH
Q 018244          302 NPRSLVT  308 (359)
Q Consensus       302 s~~~il~  308 (359)
                      ++.++++
T Consensus       234 ~~~~~~~  240 (244)
T smart00220      234 TAEEALQ  240 (244)
T ss_pred             CHHHHhh
Confidence            9999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7e-36  Score=257.09  Aligned_cols=243  Identities=17%  Similarity=0.250  Sum_probs=199.8

Q ss_pred             CCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcC-CCcccccccceeeeCCcce
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  129 (359)
                      ...++.++..||+|+|+.|..++ .++.+.+|+|++++...   ++..-...|-.+...- +||.+|.++.+|++...++
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf  327 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF  327 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence            35677888899999999999998 55678999999986532   2344456676666666 6999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC---
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS---  206 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~---  206 (359)
                      +|.||++||+|.-.+.  ..+.++++.+..+..+|+.||.|||+. ||++||+|.+|+|+|..|.+||+|+|+++..   
T Consensus       328 fvieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~r-giiyrdlkldnvlldaeghikltdygmcke~l~~  404 (593)
T KOG0695|consen  328 FVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHER-GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP  404 (593)
T ss_pred             EEEEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhc-CeeeeeccccceEEccCCceeecccchhhcCCCC
Confidence            9999999999987775  567899999999999999999999999 9999999999999999999999999998753   


Q ss_pred             -CCCCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHH----HhhhhhhhhccccccCCCChHH
Q 018244          207 -RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL----IRDRNIQTLTDSCLEGQFSSDE  281 (359)
Q Consensus       207 -~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  281 (359)
                       +...+..||+.|.|||++.+..|..++|+|+|||+++||+.|+.||.--..+.    ..+...+.++....  ++|...
T Consensus       405 gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi--riprsl  482 (593)
T KOG0695|consen  405 GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI--RIPRSL  482 (593)
T ss_pred             CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc--ccccee
Confidence             23356789999999999999999999999999999999999999986332211    12222333333332  345666


Q ss_pred             HHHHHHHHHHhcccCCCCCCC
Q 018244          282 GTELVRLASRCLQYEPRERPN  302 (359)
Q Consensus       282 ~~~l~~li~~cl~~dp~~Rps  302 (359)
                      +-.+..+++..|.+||.+|..
T Consensus       483 svkas~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  483 SVKASHVLKGFLNKDPKERLG  503 (593)
T ss_pred             ehhhHHHHHHhhcCCcHHhcC
Confidence            777889999999999999953

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=100.00  E-value=1.5e-34  Score=274.41  Aligned_cols=253  Identities=14%  Similarity=0.134  Sum_probs=177.7

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-----------------CCCcEEEEEEeCCCCCchHHH--------------HHHHH
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-----------------ENQFRIAVKRFNRSAWPDARQ--------------FLEEA  104 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~e~  104 (359)
                      .++|.+.++||+|+||+||+|..                 ..+..||||++........++              ...|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            34677788889999999999963                 235679999987543322222              33467


Q ss_pred             HHHhcCCCccc-----ccccceeee--------CCcceEEEecCCCCCHhhhhhcCC----------------------C
Q 018244          105 RAVGQLRNRRL-----ANLLGCCCE--------GDERLLVAEYMPNDTLAKHLFHWE----------------------T  149 (359)
Q Consensus       105 ~~l~~l~h~ni-----v~~~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~----------------------~  149 (359)
                      ..+.+++|.++     ++++++|..        ....+|||||+.+++|.+++....                      .
T Consensus       224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~  303 (507)
T PLN03224        224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ  303 (507)
T ss_pred             HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence            77777766544     677777653        346899999999999999886321                      1


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----CcCCCccccCcccc
Q 018244          150 QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----SYSTNLAFTPPEYL  224 (359)
Q Consensus       150 ~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----~~~~t~~y~aPE~~  224 (359)
                      ..+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++.......     ...+|+.|+|||.+
T Consensus       304 ~~~~~~~~~~i~~ql~~aL~~lH~~-~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l  382 (507)
T PLN03224        304 DKRDINVIKGVMRQVLTGLRKLHRI-GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEEL  382 (507)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhh
Confidence            2346778999999999999999999 99999999999999999999999999987543322     12337899999987


Q ss_pred             cCCC--------------------C--CCccchhhHHHHHHHHHhCCC-CCCcch-h-HHHhh--hhhh---hhcccccc
Q 018244          225 RTGR--------------------V--TPESVMYSFGTLLLDLLSGKH-IPPSHA-L-DLIRD--RNIQ---TLTDSCLE  274 (359)
Q Consensus       225 ~~~~--------------------~--~~~~Di~slG~il~elltg~~-p~~~~~-~-~~~~~--~~~~---~~~~~~~~  274 (359)
                      ....                    +  ..+.||||+||++|+|+++.. |+.... . .....  ....   ........
T Consensus       383 ~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~  462 (507)
T PLN03224        383 VMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYD  462 (507)
T ss_pred             cCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCC
Confidence            6322                    1  124799999999999999875 332210 0 00000  0000   00001111


Q ss_pred             CCCChHHHHHHHHHHHHhcccCC---CCCCCHHHHHHH
Q 018244          275 GQFSSDEGTELVRLASRCLQYEP---RERPNPRSLVTA  309 (359)
Q Consensus       275 ~~~~~~~~~~l~~li~~cl~~dp---~~Rps~~~il~~  309 (359)
                      -......++...+|+.+||..+|   .+|+|++++|++
T Consensus       463 ~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H  500 (507)
T PLN03224        463 FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH  500 (507)
T ss_pred             cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence            11123456889999999999876   689999999874

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=100.00  E-value=1.3e-35  Score=242.98  Aligned_cols=255  Identities=20%  Similarity=0.253  Sum_probs=200.9

Q ss_pred             HHHHHHHhcCCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-Ccccccccceee
Q 018244           46 IETLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCC  123 (359)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~  123 (359)
                      ++.......+.++|++++++|+|-|+.||.|. ..+.+.++||.++...   .+.+.+|+.+|..|. ||||+++++...
T Consensus        27 YE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~  103 (338)
T KOG0668|consen   27 YESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVK  103 (338)
T ss_pred             hhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhc
Confidence            34444445677899999999999999999998 5678889999998633   467899999999997 999999999998


Q ss_pred             eCC--cceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC-CCCeEEecc
Q 018244          124 EGD--ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCF  200 (359)
Q Consensus       124 ~~~--~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~-~~~~kl~DF  200 (359)
                      ++.  ...||+||+.+.+...+.     ..++.-.+..++.+++.||.|+|+. ||+|||+||.|++||. .-.++|+|+
T Consensus       104 Dp~SktpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~-GImHRDVKPhNvmIdh~~rkLrlIDW  177 (338)
T KOG0668|consen  104 DPESKTPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSM-GIMHRDVKPHNVMIDHELRKLRLIDW  177 (338)
T ss_pred             CccccCchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhc-CcccccCCcceeeechhhceeeeeec
Confidence            865  467999999997776655     3578888999999999999999999 9999999999999995 567999999


Q ss_pred             CCcccCCCCCCc---CCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchh--HHHhh------------
Q 018244          201 GLMKNSRDGRSY---STNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHAL--DLIRD------------  262 (359)
Q Consensus       201 g~a~~~~~~~~~---~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~--~~~~~------------  262 (359)
                      |+|.+..++..+   +.+..|..||.+..- .|+.+-|+|||||++..|+..+.||.....  +.+..            
T Consensus       178 GLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~  257 (338)
T KOG0668|consen  178 GLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYA  257 (338)
T ss_pred             chHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHH
Confidence            999998777544   446678999998864 488999999999999999999999864311  11100            


Q ss_pred             --hhhhhhccccccC-----------CC----C-hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          263 --RNIQTLTDSCLEG-----------QF----S-SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       263 --~~~~~~~~~~~~~-----------~~----~-~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                        ......+++....           .+    . .-.++++.+|+.+.|..|-.+|+|++|++.+
T Consensus       258 Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H  322 (338)
T KOG0668|consen  258 YLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH  322 (338)
T ss_pred             HHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence              0001111111110           00    0 1135889999999999999999999999865

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-36  Score=254.77  Aligned_cols=244  Identities=18%  Similarity=0.259  Sum_probs=190.1

Q ss_pred             ccCCCCCCcEEEEEEe-CCCcEEEEEEeCCC--CCchHHHHHHHHHHHhcCCCcccccccceeeeCC-----cceEEEec
Q 018244           63 SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERLLVAEY  134 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~  134 (359)
                      +-||.|+||.||.++. ++|+.||+|++...  +....+.+.+|+++|..++|.|++..++...-..     .+|.++|.
T Consensus        59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TEL  138 (449)
T KOG0664|consen   59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTEL  138 (449)
T ss_pred             CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHH
Confidence            4569999999999994 57999999998753  2334567899999999999999999988775542     57889999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCC---
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS---  211 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~---  211 (359)
                      +.. +|...+-  ..+.++.+.+.-+++||++||.|||+. +|.||||||.|.|++.|..+||+|||+++..+.+..   
T Consensus       139 mQS-DLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA-~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hM  214 (449)
T KOG0664|consen  139 MQS-DLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTA-NILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNM  214 (449)
T ss_pred             HHh-hhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhc-chhhccCCCccEEeccCceEEecccccccccchhhhhhh
Confidence            866 7888775  667899999999999999999999999 999999999999999999999999999998765542   


Q ss_pred             --cCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchh----HH------------H---hhhhhhhhc
Q 018244          212 --YSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHAL----DL------------I---RDRNIQTLT  269 (359)
Q Consensus       212 --~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~----~~------------~---~~~~~~~~~  269 (359)
                        .+.|..|.|||++.+.+ |+.+.||||.|||+.||+..+..|....-    +.            +   -++....++
T Consensus       215 TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~L  294 (449)
T KOG0664|consen  215 THEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVL  294 (449)
T ss_pred             HHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhh
Confidence              23578899999999765 99999999999999999988876653310    00            0   011111111


Q ss_pred             ccccc-CC--------CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 018244          270 DSCLE-GQ--------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL  310 (359)
Q Consensus       270 ~~~~~-~~--------~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L  310 (359)
                      ..... +.        .+.....+...++.+++..||++|.+..+++..+
T Consensus       295 R~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~  344 (449)
T KOG0664|consen  295 RAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR  344 (449)
T ss_pred             ccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence            11111 11        1123445678899999999999999999988764

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=100.00  E-value=6.5e-35  Score=235.34  Aligned_cols=197  Identities=17%  Similarity=0.199  Sum_probs=165.8

Q ss_pred             ccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEecC
Q 018244           59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      ...+.+||+|++|.|-+.+ ..+|...|+|.+...-. ...++.++|+++..+. .+|.+|.++|...+....+|.||.|
T Consensus        48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M  127 (282)
T KOG0984|consen   48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM  127 (282)
T ss_pred             hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh
Confidence            3456678999999999988 56899999999986532 3345678888876665 6999999999998889999999999


Q ss_pred             CCCCHhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC---
Q 018244          136 PNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (359)
Q Consensus       136 ~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~---  210 (359)
                      +. ||..+-.+  ..+..+++..+-+|+..++.||.|||++..++|||+||+|||++.+|.+|+||||++....+.-   
T Consensus       128 ~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt  206 (282)
T KOG0984|consen  128 DT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKT  206 (282)
T ss_pred             hh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHH
Confidence            65 77766543  2577899999999999999999999998899999999999999999999999999998765542   


Q ss_pred             CcCCCccccCcccccC----CCCCCccchhhHHHHHHHHHhCCCCCCcch
Q 018244          211 SYSTNLAFTPPEYLRT----GRVTPESVMYSFGTLLLDLLSGKHIPPSHA  256 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~il~elltg~~p~~~~~  256 (359)
                      ...|-..|||||.+..    ..|+-++||||||++++||.+++.|++...
T Consensus       207 ~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~  256 (282)
T KOG0984|consen  207 MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG  256 (282)
T ss_pred             HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence            2456788999998863    358999999999999999999998876543

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-35  Score=280.04  Aligned_cols=235  Identities=22%  Similarity=0.239  Sum_probs=179.2

Q ss_pred             CCCCCCcE-EEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEecCCCCCHhh
Q 018244           65 HGEKAPNV-VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPNDTLAK  142 (359)
Q Consensus        65 lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~  142 (359)
                      +|.|+.|+ ||+|... |+.||||++-...   ..-..+|++.|+.- .|||||++++.-.+..+.||..|.|.. +|.+
T Consensus       517 lG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-sL~d  591 (903)
T KOG1027|consen  517 LGYGSNGTVVFRGVYE-GREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-SLQD  591 (903)
T ss_pred             cccCCCCcEEEEEeeC-CceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-hHHH
Confidence            38888766 7999984 4589999987533   34568999999998 599999999999999999999999976 9999


Q ss_pred             hhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC---C--CCeEEeccCCcccCCCCC-----
Q 018244          143 HLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---D--VNPRLSCFGLMKNSRDGR-----  210 (359)
Q Consensus       143 ~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~---~--~~~kl~DFg~a~~~~~~~-----  210 (359)
                      ++...  +.........+....|++.||++||+. +||||||||.||||+.   +  ..++|+|||+++....+.     
T Consensus       592 lie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl-~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r  670 (903)
T KOG1027|consen  592 LIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL-KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSR  670 (903)
T ss_pred             HHhccccchhhcccccHHHHHHHHHHHHHHHHhc-ccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhc
Confidence            99642  111111133578899999999999998 9999999999999975   2  569999999998766543     


Q ss_pred             --CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          211 --SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       211 --~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                        ...||.+|+|||++....-+.++||||+||++|+.++|...+.++.....  .++..-......-....++  ++.+|
T Consensus       671 ~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--~NIl~~~~~L~~L~~~~d~--eA~dL  746 (903)
T KOG1027|consen  671 LSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--ANILTGNYTLVHLEPLPDC--EAKDL  746 (903)
T ss_pred             ccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh--hhhhcCccceeeeccCchH--HHHHH
Confidence              45689999999999998888899999999999999998544444332221  1111000000000001112  89999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~  309 (359)
                      |.+|++.+|..||++.+|+.+
T Consensus       747 I~~ml~~dP~~RPsa~~VL~H  767 (903)
T KOG1027|consen  747 ISRMLNPDPQLRPSATDVLNH  767 (903)
T ss_pred             HHHhcCCCcccCCCHHHHhCC
Confidence            999999999999999999874

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=8e-35  Score=269.82  Aligned_cols=250  Identities=16%  Similarity=0.183  Sum_probs=207.2

Q ss_pred             cCCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           54 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        54 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      +.-.+|+.+.++|.|.||.||||+ ...++..|+|+++.....+..-+.+|+-+++..+|||||-+++.+...+.++|.|
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence            445688999999999999999999 5678999999999887777777889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC----C
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----D  208 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~----~  208 (359)
                      |||.+|+|.+.-+  -.+.+++.++....+..++||+|||+. |-+|||||-.|||+++.|.+|++|||.+....    .
T Consensus        92 EycgggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~-gk~hRdiKGanilltd~gDvklaDfgvsaqitati~K  168 (829)
T KOG0576|consen   92 EYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQ-GKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAK  168 (829)
T ss_pred             EecCCCcccceee--ecccchhHHHHHHHhhhhccchhhhcC-CcccccccccceeecccCceeecccCchhhhhhhhhh
Confidence            9999999998664  677899999999999999999999999 99999999999999999999999999876543    4


Q ss_pred             CCCcCCCccccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCcc-hhHHHhhhhhhhhccccccCCCChHHHHH
Q 018244          209 GRSYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNIQTLTDSCLEGQFSSDEGTE  284 (359)
Q Consensus       209 ~~~~~~t~~y~aPE~~~---~~~~~~~~Di~slG~il~elltg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (359)
                      .....||+.|||||+..   .+.|...+|||++|+...|+---++|.... ......-......-.+.+  .-....++.
T Consensus       169 rksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~l--kDk~kws~~  246 (829)
T KOG0576|consen  169 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTL--KDKTKWSEF  246 (829)
T ss_pred             hhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcc--cCCccchHH
Confidence            46789999999999764   456999999999999999997766554322 111111111111111111  123457888


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHH
Q 018244          285 LVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       285 l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                      +-+|++.++.++|.+|||++.+|.
T Consensus       247 fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  247 FHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             HHHHHHHHhcCCCccCCChhhhee
Confidence            999999999999999999998775

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=100.00  E-value=2.8e-34  Score=259.47  Aligned_cols=250  Identities=15%  Similarity=0.149  Sum_probs=196.9

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCC------cccccccceeeeCCcce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN------RRLANLLGCCCEGDERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~~~~~~~~~~~~~  129 (359)
                      ..|.+.+..|+|-|++|..|.. ..|..||||++.... .-.+.-+.|+++|++|..      -|+++++..|...+++|
T Consensus       432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC  510 (752)
T KOG0670|consen  432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC  510 (752)
T ss_pred             ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence            4678888899999999999984 347799999998643 224456789999999952      38999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC-CCeEEeccCCcccCC
Q 018244          130 LVAEYMPNDTLAKHLFHW-ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSR  207 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~-~~~kl~DFg~a~~~~  207 (359)
                      ||||-+. .+|.+.|+.. ..-.|....+..++.|+..||..|... ||+|.||||+|||+++. ..+||||||.|....
T Consensus       511 lVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c-~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~  588 (752)
T KOG0670|consen  511 LVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC-GVLHADIKPDNILVNESKNILKLCDFGSASFAS  588 (752)
T ss_pred             EEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc-CeeecccCccceEeccCcceeeeccCccccccc
Confidence            9999885 4899999753 344678889999999999999999999 99999999999999864 669999999998766


Q ss_pred             CCC--CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhh----------------------
Q 018244          208 DGR--SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR----------------------  263 (359)
Q Consensus       208 ~~~--~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~----------------------  263 (359)
                      ...  .+..+.-|.|||++.|.+|+...|+||.||+||||.||+..|++...+.+..-                      
T Consensus       589 eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqH  668 (752)
T KOG0670|consen  589 ENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQH  668 (752)
T ss_pred             cccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhh
Confidence            553  34456789999999999999999999999999999999998887633322110                      


Q ss_pred             ------------------h---hhhhcccc------cc--CCCC---hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          264 ------------------N---IQTLTDSC------LE--GQFS---SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       264 ------------------~---~~~~~~~~------~~--~~~~---~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                        .   ....+.+.      +.  ..++   ......+.+|+.+||..||++|.|..++|.+
T Consensus       669 FD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H  746 (752)
T KOG0670|consen  669 FDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH  746 (752)
T ss_pred             cccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence                              0   00000000      00  0011   1244678999999999999999999998864

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-34  Score=261.72  Aligned_cols=201  Identities=14%  Similarity=0.149  Sum_probs=173.8

Q ss_pred             HHHhcCCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc-----h---HHHHHHHHHHHhcCC---Cccccc
Q 018244           50 RTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-----D---ARQFLEEARAVGQLR---NRRLAN  117 (359)
Q Consensus        50 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~---~~~~~~e~~~l~~l~---h~niv~  117 (359)
                      +...++|++|..++.+|.|+||.|+.|+. .+...|+||.+.+...-     .   .-.+-.||++|..++   |+||++
T Consensus       554 e~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlK  633 (772)
T KOG1152|consen  554 EKEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILK  633 (772)
T ss_pred             eeeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhh
Confidence            34557899999999999999999999995 45778999998764311     0   112456999999997   999999


Q ss_pred             ccceeeeCCcceEEEecC-CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeE
Q 018244          118 LLGCCCEGDERLLVAEYM-PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR  196 (359)
Q Consensus       118 ~~~~~~~~~~~~lv~e~~-~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~k  196 (359)
                      ++++|++++++||+||-- ++-+|++++.  .+..+++..+..|+.||+.|+++||+. ||||||||-+||+++.+|-+|
T Consensus       634 lLdfFEddd~yyl~te~hg~gIDLFd~IE--~kp~m~E~eAk~IFkQV~agi~hlh~~-~ivhrdikdenvivd~~g~~k  710 (772)
T KOG1152|consen  634 LLDFFEDDDYYYLETEVHGEGIDLFDFIE--FKPRMDEPEAKLIFKQVVAGIKHLHDQ-GIVHRDIKDENVIVDSNGFVK  710 (772)
T ss_pred             hhheeecCCeeEEEecCCCCCcchhhhhh--ccCccchHHHHHHHHHHHhcccccccc-CceecccccccEEEecCCeEE
Confidence            999999999999999964 5569999996  567799999999999999999999999 999999999999999999999


Q ss_pred             EeccCCcccCCC--CCCcCCCccccCcccccCCCCC-CccchhhHHHHHHHHHhCCCCCC
Q 018244          197 LSCFGLMKNSRD--GRSYSTNLAFTPPEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPP  253 (359)
Q Consensus       197 l~DFg~a~~~~~--~~~~~~t~~y~aPE~~~~~~~~-~~~Di~slG~il~elltg~~p~~  253 (359)
                      |+|||.+.....  ...+.||..|.|||++.+.+|- ...|||++|++||-++....|++
T Consensus       711 lidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  711 LIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             EeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            999999876544  4578899999999999998875 46899999999999998887765

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=100.00  E-value=4.6e-32  Score=231.39  Aligned_cols=206  Identities=25%  Similarity=0.372  Sum_probs=182.7

Q ss_pred             CCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCHhh
Q 018244           65 HGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK  142 (359)
Q Consensus        65 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~  142 (359)
                      ||.|++|.||++... ++..+++|.+...... ....+.+|++.++.++|++++++++++......++++||+++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            589999999999965 4889999999876533 34678999999999999999999999999899999999999899999


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC-CCCeEEeccCCcccCCCC----CCcCCCcc
Q 018244          143 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRDG----RSYSTNLA  217 (359)
Q Consensus       143 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~-~~~~kl~DFg~a~~~~~~----~~~~~t~~  217 (359)
                      ++... ...+++..+..++.+++.+|.+||+. +++|+||+|.||+++. ++.++|+|||.+......    ....+...
T Consensus        81 ~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~-~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~  158 (215)
T cd00180          81 LLKEN-EGKLSEDEILRILLQILEGLEYLHSN-GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPA  158 (215)
T ss_pred             HHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCC
Confidence            98642 24689999999999999999999999 9999999999999999 899999999998876553    33456788


Q ss_pred             ccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccC
Q 018244          218 FTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE  296 (359)
Q Consensus       218 y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  296 (359)
                      |++||.+... .++.++|+|++|+++++|                                     ..+.+++.+|++.|
T Consensus       159 ~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~~l~~~l~~~  201 (215)
T cd00180         159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELKDLIRKMLQKD  201 (215)
T ss_pred             ccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHHHHHHHHhhCC
Confidence            9999999877 788999999999999999                                     46899999999999


Q ss_pred             CCCCCCHHHHHHH
Q 018244          297 PRERPNPRSLVTA  309 (359)
Q Consensus       297 p~~Rps~~~il~~  309 (359)
                      |++||++.++++.
T Consensus       202 p~~R~~~~~l~~~  214 (215)
T cd00180         202 PEKRPSAKEILEH  214 (215)
T ss_pred             cccCcCHHHHhhC
Confidence            9999999999864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-33  Score=241.44  Aligned_cols=245  Identities=18%  Similarity=0.231  Sum_probs=189.8

Q ss_pred             cccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCC--CCchHHHHHHHHHHHhcCCCcccccccceeeeC------Ccc
Q 018244           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DER  128 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~  128 (359)
                      +|.-++-+|.|+- .|-.|- .-.+.+||+|++...  .....+...+|..++..+.|+||++++.+|.-.      ..+
T Consensus        18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~   96 (369)
T KOG0665|consen   18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV   96 (369)
T ss_pred             eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence            4555666688886 555554 235778999988654  344567789999999999999999999998654      357


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      |+||||+.. +|...+.    ..++-..+..+.+|++.|++|||+. ||+||||||+||++..++.+||.|||+|+....
T Consensus        97 y~v~e~m~~-nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~-~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~  170 (369)
T KOG0665|consen   97 YLVMELMDA-NLCQVIL----MELDHETISYILYQMLCGIKHLHSA-GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT  170 (369)
T ss_pred             HHHHHhhhh-HHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhc-ceeecccCcccceecchhheeeccchhhcccCc
Confidence            999999966 8988875    3467788999999999999999999 999999999999999999999999999987665


Q ss_pred             C---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchh-HHHhh--------------------hh
Q 018244          209 G---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRD--------------------RN  264 (359)
Q Consensus       209 ~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~-~~~~~--------------------~~  264 (359)
                      .   +.++.|..|.|||++.+..+.+.+||||+||++.||++|.-.|++... +.+..                    ..
T Consensus       171 ~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~  250 (369)
T KOG0665|consen  171 DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRN  250 (369)
T ss_pred             ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHH
Confidence            4   456778899999999998899999999999999999999987765310 00000                    00


Q ss_pred             ------------hhhh-ccccccC--CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          265 ------------IQTL-TDSCLEG--QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       265 ------------~~~~-~~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                  .... .+.....  ..+.-....+++++.+||..||++|.|++++|.+
T Consensus       251 yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H  310 (369)
T KOG0665|consen  251 YVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH  310 (369)
T ss_pred             HhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence                        0000 0000000  0111234678999999999999999999999987

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-32  Score=246.39  Aligned_cols=131  Identities=16%  Similarity=0.195  Sum_probs=113.4

Q ss_pred             CcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-----C---cccccccceeee---
Q 018244           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----N---RRLANLLGCCCE---  124 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~~~~~~~~---  124 (359)
                      .+|.++++||=|-|++||+|. ..+...||+|+.+... .-.+..+.||++|++++     |   ..||++++.|..   
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            368899999999999999998 5567789999987432 22455788999999984     2   369999999965   


Q ss_pred             -CCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee
Q 018244          125 -GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF  189 (359)
Q Consensus       125 -~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll  189 (359)
                       +.++|+|+|++ |.+|..+|....-+.++...+..|++||+.||.|||...||||.||||+|||+
T Consensus       157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl  221 (590)
T KOG1290|consen  157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLL  221 (590)
T ss_pred             CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeee
Confidence             45899999999 66999999887788899999999999999999999998899999999999999

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=6e-32  Score=226.60  Aligned_cols=251  Identities=19%  Similarity=0.215  Sum_probs=189.4

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-Ccccccccce-eeeCCcceEEEec
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGC-CCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~-~~~~~~~~lv~e~  134 (359)
                      .|.+.+.||+|.||.+-++.+ .+...+++|-+.+... ...+|.+|..---.|. |.||+.-+++ |+..+..++++||
T Consensus        25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t-t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~  103 (378)
T KOG1345|consen   25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT-TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF  103 (378)
T ss_pred             hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh-hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence            577888899999999999994 5678899999987653 4678999988777774 8999987764 6777888899999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC--CCCCeEEeccCCcccCCCCCCc
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDVNPRLSCFGLMKNSRDGRSY  212 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~--~~~~~kl~DFg~a~~~~~~~~~  212 (359)
                      ++.|+|.+-+   ....+.+....+++.|+++|+.|||++ ++||||||.+||||-  +...+||||||+.+..+..-..
T Consensus       104 aP~gdL~snv---~~~GigE~~~K~v~~ql~SAi~fMHsk-nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~  179 (378)
T KOG1345|consen  104 APRGDLRSNV---EAAGIGEANTKKVFAQLLSAIEFMHSK-NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY  179 (378)
T ss_pred             Cccchhhhhc---CcccccHHHHHHHHHHHHHHHHHhhcc-chhhcccccceEEEecCCccEEEeeecccccccCceehh
Confidence            9999999988   556789999999999999999999999 999999999999994  3457999999998765543322


Q ss_pred             -CCCccccCcccccC---CC--CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhh---ccccccCCCChHHHH
Q 018244          213 -STNLAFTPPEYLRT---GR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL---TDSCLEGQFSSDEGT  283 (359)
Q Consensus       213 -~~t~~y~aPE~~~~---~~--~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  283 (359)
                       .-+..|.|||.+..   ++  ..+.+|+|.||+++|.++||..|++....+.-........   ..+.++. .-...++
T Consensus       180 ~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~-~F~~fs~  258 (378)
T KOG1345|consen  180 LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPK-KFNPFSE  258 (378)
T ss_pred             hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCch-hhcccCH
Confidence             23568999997653   22  5788999999999999999998876332111111111111   1111111 1134567


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQ  314 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~~~  314 (359)
                      .+..+.++-|..+|++|=-..++-+.....+
T Consensus       259 ~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w  289 (378)
T KOG1345|consen  259 KALRLFKKSLTPRFKDRCKIWTAKKMRKCLW  289 (378)
T ss_pred             HHHHHHHHhcCCcccccchhHHHHHHHHHHH
Confidence            8999999999999999955555544444333

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.97  E-value=2.7e-32  Score=241.68  Aligned_cols=245  Identities=22%  Similarity=0.271  Sum_probs=191.9

Q ss_pred             CcccccccCCCCCCcEEEEEEeC----CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv  131 (359)
                      ..|..+.++|.|+|++||+|+..    .+..||+|.+...+..  ..+.+|+++|..+. +.||+++.+++..++...+|
T Consensus        36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p--~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~iv  113 (418)
T KOG1167|consen   36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP--SRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIV  113 (418)
T ss_pred             hhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc--hHHHHHHHHHHHhccchhhhcchhhhccCCeeEEE
Confidence            45678888999999999999843    4678999999876543  56889999999995 99999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC-CCCeEEeccCCcccCC---
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSR---  207 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~-~~~~kl~DFg~a~~~~---  207 (359)
                      +||++.....++..     .++...+..+++.++.||.++|.+ |||||||||+|+|.+. .+.-.|+|||+|...+   
T Consensus       114 lp~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~-GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~  187 (418)
T KOG1167|consen  114 LPYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKN-GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQ  187 (418)
T ss_pred             ecccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhcc-CccccCCCccccccccccCCceEEechhHHHHHhhh
Confidence            99999999988874     377889999999999999999999 9999999999999984 5789999999986100   


Q ss_pred             --------------C--C-----------------------------CCcCCCccccCcccccCCC-CCCccchhhHHHH
Q 018244          208 --------------D--G-----------------------------RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTL  241 (359)
Q Consensus       208 --------------~--~-----------------------------~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~i  241 (359)
                                    .  +                             -...||++|.|||++...+ .+.++||||.|+|
T Consensus       188 ~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI  267 (418)
T KOG1167|consen  188 QTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVI  267 (418)
T ss_pred             hhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccce
Confidence                          0  0                             0135799999999988654 7889999999999


Q ss_pred             HHHHHhCCCCCCcchhH--------------HHhh-----hh------------------hhhh-cccccc--------C
Q 018244          242 LLDLLSGKHIPPSHALD--------------LIRD-----RN------------------IQTL-TDSCLE--------G  275 (359)
Q Consensus       242 l~elltg~~p~~~~~~~--------------~~~~-----~~------------------~~~~-~~~~~~--------~  275 (359)
                      ++.+++++.||.....+              .+.+     +.                  ...+ ...+..        .
T Consensus       268 ~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~  347 (418)
T KOG1167|consen  268 LLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTERE  347 (418)
T ss_pred             eehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeec
Confidence            99999999998533110              0000     00                  0000 000000        0


Q ss_pred             CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ......+..+.+|+.+|+..||.+|.|++++|.+
T Consensus       348 ~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH  381 (418)
T KOG1167|consen  348 IGSDVFPALLLDLLDKCLELNPQKRITAEDALKH  381 (418)
T ss_pred             cccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence            1112234589999999999999999999999874

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.97  E-value=2.4e-31  Score=233.19  Aligned_cols=251  Identities=19%  Similarity=0.221  Sum_probs=199.5

Q ss_pred             ccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeC-CcceE
Q 018244           59 ENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEG-DERLL  130 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~l  130 (359)
                      .+....+-+|.||.||.|.|.      +.+.|-+|.++....+ ....++.|.-.|..+.|||+..+.+++.+. ...+.
T Consensus       286 v~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V  365 (563)
T KOG1024|consen  286 VRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFV  365 (563)
T ss_pred             eechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceE
Confidence            344445688999999999653      3456777877655432 355688899999999999999999998764 56788


Q ss_pred             EEecCCCCCHhhhhhc------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          131 VAEYMPNDTLAKHLFH------WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                      ++.+..-|+|..++..      ...+.++..++..++.|++.|++|||+. ++||.||...|.+||+...+||+|-.+++
T Consensus       366 ~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~-~ViHkDiAaRNCvIdd~LqVkltDsaLSR  444 (563)
T KOG1024|consen  366 LYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH-GVIHKDIAARNCVIDDQLQVKLTDSALSR  444 (563)
T ss_pred             EEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc-CcccchhhhhcceehhheeEEeccchhcc
Confidence            8999999999999972      1345778889999999999999999999 99999999999999999999999999998


Q ss_pred             cCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCC
Q 018244          205 NSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS  278 (359)
Q Consensus       205 ~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (359)
                      ..-+..      .......||+||.+....|+.++|+|||||+||||+|-...+..+.    ..-.....+....+-..|
T Consensus       445 DLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeI----DPfEm~~ylkdGyRlaQP  520 (563)
T KOG1024|consen  445 DLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEI----DPFEMEHYLKDGYRLAQP  520 (563)
T ss_pred             ccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcccc----CHHHHHHHHhccceecCC
Confidence            754432      2223468999999999999999999999999999998443333221    111223333344444567


Q ss_pred             hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 018244          279 SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ  314 (359)
Q Consensus       279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~  314 (359)
                      .++++++..+|.-||+.+|++||++++++.-|....
T Consensus       521 ~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~  556 (563)
T KOG1024|consen  521 FNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH  556 (563)
T ss_pred             CCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence            788999999999999999999999999999888753

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.97  E-value=1.6e-30  Score=224.92  Aligned_cols=193  Identities=23%  Similarity=0.259  Sum_probs=169.8

Q ss_pred             cccccCCCCCCcEEEEEEeCC-CcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCC
Q 018244           60 NIVSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (359)
Q Consensus        60 ~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  137 (359)
                      .+...+|.|++|.||++...+ +..+|+|.+...... ..+.+.+|++.++.++|+|++++++++......++++||+++
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~   81 (225)
T smart00221        2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG   81 (225)
T ss_pred             ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence            455677999999999999654 889999999876554 567889999999999999999999999988999999999999


Q ss_pred             CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-----CCc
Q 018244          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RSY  212 (359)
Q Consensus       138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-----~~~  212 (359)
                      ++|.+++..... .+++..+..++.+++.++.+||+. +++|+||+|+||+++.++.++|+|||.+......     ...
T Consensus        82 ~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~  159 (225)
T smart00221       82 GDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSL-GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTV  159 (225)
T ss_pred             CCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccce
Confidence            999999864221 289999999999999999999999 9999999999999999999999999998876554     345


Q ss_pred             CCCccccCcccc-cCCCCCCccchhhHHHHHHHHHhCCCCCCc
Q 018244          213 STNLAFTPPEYL-RTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (359)
Q Consensus       213 ~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~elltg~~p~~~  254 (359)
                      .++..|++||.+ ....++.++|+|+||+++++|++|+.||..
T Consensus       160 ~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      160 KGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             eccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            567889999998 556688899999999999999999999865

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.96  E-value=1.8e-29  Score=210.61  Aligned_cols=167  Identities=16%  Similarity=0.109  Sum_probs=128.7

Q ss_pred             CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCcCCCcc
Q 018244          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA  217 (359)
Q Consensus       138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~t~~  217 (359)
                      |+|.+++.. .+..+++..++.++.|++.||.|||+. +      ||+|||++.++.+++  ||++....... ..||+.
T Consensus         1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~-~------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~g~~~   69 (176)
T smart00750        1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQ-A------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SRVDPY   69 (176)
T ss_pred             CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhc-C------CcccEeEcCccceee--ccceEeecccc-CCCccc
Confidence            689999864 355799999999999999999999998 6      999999999999999  99988765443 367899


Q ss_pred             ccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhH-HHhhhhhhhhcccccc-CCCChHHHH--HHHHHHHHhc
Q 018244          218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIRDRNIQTLTDSCLE-GQFSSDEGT--ELVRLASRCL  293 (359)
Q Consensus       218 y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~--~l~~li~~cl  293 (359)
                      |+|||++.+..++.++|||||||++|||+||+.||...... ................ ...+...+.  ++.+++.+||
T Consensus        70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl  149 (176)
T smart00750       70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCA  149 (176)
T ss_pred             ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHH
Confidence            99999999999999999999999999999999887543211 1111111111111000 011223333  6999999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHhhh
Q 018244          294 QYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       294 ~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      +.||++|||+.++++++..+..
T Consensus       150 ~~~p~~Rp~~~~ll~~~~~~~~  171 (176)
T smart00750      150 SRLPQRREAANHYLAHCRALFA  171 (176)
T ss_pred             hcccccccCHHHHHHHHHHHHH
Confidence            9999999999999999877644

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.96  E-value=5.1e-30  Score=260.58  Aligned_cols=190  Identities=16%  Similarity=0.138  Sum_probs=139.3

Q ss_pred             CCC-ccccccccee-------eeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 018244          110 LRN-RRLANLLGCC-------CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHD  181 (359)
Q Consensus       110 l~h-~niv~~~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~D  181 (359)
                      ++| +||.+++++|       .....+++++||+ +++|.+++.. ....+++..+..++.||+.||.|||++ ||+|||
T Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-gIvHrD  105 (793)
T PLN00181         29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQ-GIVVHN  105 (793)
T ss_pred             hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhC-Ceeecc
Confidence            345 5777888877       2334677888987 5599999964 345699999999999999999999999 999999


Q ss_pred             CCCCCeeeCC-------------------CCCeEEeccCCcccCCCC--------------------CCcCCCccccCcc
Q 018244          182 LNAYRIVFDD-------------------DVNPRLSCFGLMKNSRDG--------------------RSYSTNLAFTPPE  222 (359)
Q Consensus       182 ikp~NIll~~-------------------~~~~kl~DFg~a~~~~~~--------------------~~~~~t~~y~aPE  222 (359)
                      |||+||||+.                   ++.+|++|||+++.....                    ....+|+.|+|||
T Consensus       106 lKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE  185 (793)
T PLN00181        106 VRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPE  185 (793)
T ss_pred             CCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChh
Confidence            9999999954                   455677777776532110                    0134678899999


Q ss_pred             cccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCC
Q 018244          223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN  302 (359)
Q Consensus       223 ~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps  302 (359)
                      ++.+..++.++|||||||+||||++|..|+..... ... ........+.     ..........++.+||+.||.+|||
T Consensus       186 ~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~L~~~P~~Rps  258 (793)
T PLN00181        186 EDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-TMS-SLRHRVLPPQ-----ILLNWPKEASFCLWLLHPEPSCRPS  258 (793)
T ss_pred             hhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-HHH-HHHHhhcChh-----hhhcCHHHHHHHHHhCCCChhhCcC
Confidence            99999999999999999999999998866542211 111 1111111110     1112345678899999999999999


Q ss_pred             HHHHHHH
Q 018244          303 PRSLVTA  309 (359)
Q Consensus       303 ~~~il~~  309 (359)
                      +.+++++
T Consensus       259 ~~eil~h  265 (793)
T PLN00181        259 MSELLQS  265 (793)
T ss_pred             hHHHhhc
Confidence            9999874

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.3e-27  Score=200.83  Aligned_cols=254  Identities=20%  Similarity=0.299  Sum_probs=202.0

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCch--HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      .++..+++-+|.....|..|+|+++.+ .+++|++.......  ...|..|.-.|+.+.||||+.+++.|..+.++.+|.
T Consensus       188 d~~~lnl~tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~is  266 (448)
T KOG0195|consen  188 DVSSLNLITKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIIS  266 (448)
T ss_pred             chhhhhhhhhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEee
Confidence            455667777888899999999999765 46668877654433  346888999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccc-cCCCCCeeeCCCCCeEEeccCCcccCCCCCC
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS  211 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~-Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~  211 (359)
                      .|++.|+|...++....-..+..++.+++.+|+.|++|||+...++-| -+....+++|++.+.+|+ .+-+++.-....
T Consensus       267 q~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsfqe~g  345 (448)
T KOG0195|consen  267 QYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQEVG  345 (448)
T ss_pred             eeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeeeeccc
Confidence            999999999999866566678889999999999999999998566666 799999999999888775 222333222222


Q ss_pred             cCCCccccCcccccCCCC---CCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRV---TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~---~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                      ..-.+.|++||.++..+-   -.++|+|||++++|||.|..-||.+-........    +--..++..+|+..+..+.+|
T Consensus       346 r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmk----ialeglrv~ippgis~hm~kl  421 (448)
T KOG0195|consen  346 RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK----IALEGLRVHIPPGISRHMNKL  421 (448)
T ss_pred             cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh----hhhccccccCCCCccHHHHHH
Confidence            333579999999986653   3479999999999999999988876533322211    122335556788889999999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHHHhh
Q 018244          289 ASRCLQYEPRERPNPRSLVTALVTLQ  314 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~L~~~~  314 (359)
                      +.-|+..||.+||.+..|+-.|+++.
T Consensus       422 m~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  422 MNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             HHHHhcCCCCcCCCcceehhhHHHhc
Confidence            99999999999999999999998864

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.94  E-value=2e-25  Score=203.86  Aligned_cols=259  Identities=16%  Similarity=0.142  Sum_probs=196.7

Q ss_pred             cccccccCCCCCCcEEEEEEeCCC--cEEEEEEeCCCCCchHHHHHHHHHHHhcCCC----ccccccccee-eeCCcceE
Q 018244           58 MENIVSEHGEKAPNVVYKGKLENQ--FRIAVKRFNRSAWPDARQFLEEARAVGQLRN----RRLANLLGCC-CEGDERLL  130 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~~~~~~-~~~~~~~l  130 (359)
                      .|.+.+.||+|+||.||.+.....  ..+|+|............+..|+.++..+..    +++..+++.+ ......++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            788999999999999999995443  4799998876543333367778888888863    5888888888 47778899


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC-----CCeEEeccCCccc
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-----VNPRLSCFGLMKN  205 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~-----~~~kl~DFg~a~~  205 (359)
                      ||+.+ |.+|.++......+.++..+...++.|++.+|.+||+. |++||||||+|+++...     ..+.|.|||+++.
T Consensus        99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~-G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~  176 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK-GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR  176 (322)
T ss_pred             EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc-CcccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence            99998 66999988654567899999999999999999999999 99999999999999854     4699999999982


Q ss_pred             CC---C-----------CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccc
Q 018244          206 SR---D-----------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS  271 (359)
Q Consensus       206 ~~---~-----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~  271 (359)
                      ..   .           .....||..|+++....+...+.+.|+||++.++.+++.|.-|+.......... ........
T Consensus       177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~-~~~~~~~~  255 (322)
T KOG1164|consen  177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKS-KFEKDPRK  255 (322)
T ss_pred             ccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHH-HHHHHhhh
Confidence            11   1           112348999999999999999999999999999999999986654332111111 11111111


Q ss_pred             cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccC
Q 018244          272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV  319 (359)
Q Consensus       272 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~  319 (359)
                      ..........+..+.++...+-..+...+|....+...++........
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~  303 (322)
T KOG1164|consen  256 LLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEGS  303 (322)
T ss_pred             hccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcCC
Confidence            111101223445677777777779999999999999998887665433

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.94  E-value=3e-26  Score=209.23  Aligned_cols=155  Identities=15%  Similarity=0.020  Sum_probs=122.2

Q ss_pred             cccccccCCCCCCcEEEEEEeC--CCcEEEEEEeCCCC-----CchHHHHHHHHHHHhcCCCccccc-ccceeeeCCcce
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE--NQFRIAVKRFNRSA-----WPDARQFLEEARAVGQLRNRRLAN-LLGCCCEGDERL  129 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~-~~~~~~~~~~~~  129 (359)
                      .|.+.+.||+|+||+||+|...  ++..+|||++....     ......+.+|+++|+.++|+|++. +++    .+..+
T Consensus        19 ~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~----~~~~~   94 (365)
T PRK09188         19 RFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA----TGKDG   94 (365)
T ss_pred             CceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----cCCcE
Confidence            5777888899999999999853  57778999875331     112456899999999999999985 433    24689


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccC-CCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL-NAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Di-kp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      |||||++|++|.. +.  ..   .   ...++.|++.||.|||+. ||+|||| ||+|||++.++.++|+|||+++....
T Consensus        95 LVmE~~~G~~L~~-~~--~~---~---~~~~~~~i~~aL~~lH~~-gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~  164 (365)
T PRK09188         95 LVRGWTEGVPLHL-AR--PH---G---DPAWFRSAHRALRDLHRA-GITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR  164 (365)
T ss_pred             EEEEccCCCCHHH-hC--cc---c---hHHHHHHHHHHHHHHHHC-CCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence            9999999999963 21  11   1   146789999999999999 9999999 99999999999999999999986543


Q ss_pred             CC------------CcCCCccccCcccccC
Q 018244          209 GR------------SYSTNLAFTPPEYLRT  226 (359)
Q Consensus       209 ~~------------~~~~t~~y~aPE~~~~  226 (359)
                      ..            ...+++.|+|||.+..
T Consensus       165 ~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        165 RGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             CcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            32            2345778999998874

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.93  E-value=1.5e-24  Score=197.42  Aligned_cols=247  Identities=22%  Similarity=0.260  Sum_probs=193.9

Q ss_pred             ccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc---hHHHHHHHHHHHhcCCCc-ccccccceeeeCCcceEEEec
Q 018244           59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNR-RLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e~  134 (359)
                      |.+.+.||.|+||.||++...  ..+|+|.+......   ....+.+|+.++..+.|+ +++++.+.+......+++++|
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            566778899999999999976  67999999865433   256789999999999988 799999999777778999999


Q ss_pred             CCCCCHhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC-CeEEeccCCcccCCCC---
Q 018244          135 MPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~-~~kl~DFg~a~~~~~~---  209 (359)
                      +.++++.+++..... ..++......++.|++.++.|+|.. +++|||+||+||+++..+ .++++|||.+......   
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~-~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~  158 (384)
T COG0515          80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK-GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST  158 (384)
T ss_pred             CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence            999999977753211 2689999999999999999999999 999999999999999988 7999999998754432   


Q ss_pred             -------CCcCCCccccCcccccC---CCCCCccchhhHHHHHHHHHhCCCCCCcchh----HHHhhhhhhhhccccccC
Q 018244          210 -------RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNIQTLTDSCLEG  275 (359)
Q Consensus       210 -------~~~~~t~~y~aPE~~~~---~~~~~~~Di~slG~il~elltg~~p~~~~~~----~~~~~~~~~~~~~~~~~~  275 (359)
                             ....++..|+|||.+.+   ..+....|+||+|++++++++|..|+.....    ............. ....
T Consensus       159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~  237 (384)
T COG0515         159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-SLAS  237 (384)
T ss_pred             ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc-cccc
Confidence                   45568899999999987   5788899999999999999999988655432    1111111111110 0000


Q ss_pred             CCC----hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          276 QFS----SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       276 ~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ...    ......+.+++..++..+|..|.+..+....
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            111    1123578999999999999999998887764

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.92  E-value=2.2e-24  Score=178.47  Aligned_cols=267  Identities=15%  Similarity=0.132  Sum_probs=208.3

Q ss_pred             CcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ..|+++++||+|+||.+|.|. ..+|..||||+-.....  ..++..|..+...|+ -..|..+..++.+...-.+||+.
T Consensus        15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL   92 (341)
T KOG1163|consen   15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL   92 (341)
T ss_pred             cceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence            368999999999999999998 78899999998764432  345677888888887 46888889899999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC---CCCeEEeccCCcccCCC---
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRD---  208 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~---~~~~kl~DFg~a~~~~~---  208 (359)
                      . |-||.+++.- ..+.++..+++-++-|++.-++|+|.+ +.+||||||+|+|..-   ...+.|+|||+|+...+   
T Consensus        93 L-GPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r-~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t  169 (341)
T KOG1163|consen   93 L-GPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLR-NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRT  169 (341)
T ss_pred             c-CccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhh-ccccccCCccceeeccccccceEEEEeccchhhhccccc
Confidence            8 6699998743 567899999999999999999999999 9999999999999963   45699999999986543   


Q ss_pred             --------CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccC---CC
Q 018244          209 --------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG---QF  277 (359)
Q Consensus       209 --------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~  277 (359)
                              +....||..|.+--...+...+...|+-|+|.+|.++..|.-|+++-....- .+..+.+.......   ..
T Consensus       170 ~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk-~QKyEkI~EkK~s~~ie~L  248 (341)
T KOG1163|consen  170 RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATK-KQKYEKISEKKMSTPIEVL  248 (341)
T ss_pred             cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhH-HHHHHHHHHhhcCCCHHHH
Confidence                    3456788889887666666677889999999999999999988876433211 11111111111110   11


Q ss_pred             ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccCCccccchhHH
Q 018244          278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVSCFLFSSQFT  329 (359)
Q Consensus       278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~~~~~~~~~~  329 (359)
                      -...+.++.-.+..|-..--++-|...-+-+.++-+.............+..
T Consensus       249 C~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~d~iyDW~~  300 (341)
T KOG1163|consen  249 CKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNHQYDYIYDWTM  300 (341)
T ss_pred             hCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccccCCeEeeHHH
Confidence            1335677889999999999999999998888888887777766666666654

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=5.5e-26  Score=220.58  Aligned_cols=245  Identities=16%  Similarity=0.080  Sum_probs=181.6

Q ss_pred             ccccCCCCCCcEEEEEE-eCCCcEEEEEEeCC---CCCc--h-HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNR---SAWP--D-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~---~~~~--~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ....+|.|++|.|+.+. ....+.++.|.+..   ....  . ...+..|+-+-..++|+|++..+..+.+.....-+||
T Consensus       322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE  401 (601)
T KOG0590|consen  322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME  401 (601)
T ss_pred             ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence            34456999999888877 33445556565432   1111  1 1125668888888999999988887777666666699


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      ||++ +|..++.+  ...++...+..++.|++.|+.|||.. |+.|||+|++|++++.+|.+||+|||.+..+.-.    
T Consensus       402 ~~~~-Dlf~~~~~--~~~~~~~e~~c~fKqL~~Gv~y~h~~-GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~  477 (601)
T KOG0590|consen  402 YCPY-DLFSLVMS--NGKLTPLEADCFFKQLLRGVKYLHSM-GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKN  477 (601)
T ss_pred             cccH-HHHHHHhc--ccccchhhhhHHHHHHHHHHHHHHhc-CceeccCccccEEEecCCceEEeecCcceeeccCcchh
Confidence            9999 99999863  34688889999999999999999999 9999999999999999999999999998765432    


Q ss_pred             ----CCcCCCccccCcccccCCCCCC-ccchhhHHHHHHHHHhCCCCCCcchhHHHh--hhhh-hhhccccccCCCChHH
Q 018244          210 ----RSYSTNLAFTPPEYLRTGRVTP-ESVMYSFGTLLLDLLSGKHIPPSHALDLIR--DRNI-QTLTDSCLEGQFSSDE  281 (359)
Q Consensus       210 ----~~~~~t~~y~aPE~~~~~~~~~-~~Di~slG~il~elltg~~p~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~  281 (359)
                          ....|+.+|+|||.+.+..|++ ..||||.|+++..|++|+.|+.........  .... .......-........
T Consensus       478 ~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  557 (601)
T KOG0590|consen  478 IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLL  557 (601)
T ss_pred             hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhc
Confidence                2346788999999999999987 589999999999999999766433221110  0000 0000000011122446


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          282 GTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       282 ~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +...+.+|.+||+.||.+|.|+++|++.
T Consensus       558 p~~~~~~~~~~l~~~P~~R~ti~~i~~d  585 (601)
T KOG0590|consen  558 PRETRIIIYRMLQLDPTKRITIEQILND  585 (601)
T ss_pred             hhhHHHHHHHHccCChhheecHHHHhhC
Confidence            7788999999999999999999999864

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.92  E-value=2.6e-25  Score=216.99  Aligned_cols=245  Identities=18%  Similarity=0.205  Sum_probs=182.2

Q ss_pred             cccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCC-CchHH---HHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA-WPDAR---QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~---~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ++...+.||.+.|=.|.+|+.+.|. |+||++-+.. .-...   +-.+|++ ...++|||.+.+.-+-......|||-+
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq  101 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ  101 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence            5677788999999999999998886 9999987654 22233   3344555 556689999999888777888899999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--C-
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--R-  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--~-  210 (359)
                      |+.. +|.|.+.  .+.-+...+...|+.|++.||..+|.. ||+|+|||.+||||+....+.|+||...+...-.  + 
T Consensus       102 yvkh-nLyDRlS--TRPFL~~iEKkWiaFQLL~al~qcH~~-gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP  177 (1431)
T KOG1240|consen  102 YVKH-NLYDRLS--TRPFLVLIEKKWIAFQLLKALSQCHKL-GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP  177 (1431)
T ss_pred             HHhh-hhhhhhc--cchHHHHHHHHHHHHHHHHHHHHHHHc-CccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence            9977 8999985  344567788899999999999999999 9999999999999999999999999876543211  1 


Q ss_pred             --------CcCCCccccCcccccCC----------C-CCCccchhhHHHHHHHHHhC-CCCCCcchhHHHhhhhhhhhcc
Q 018244          211 --------SYSTNLAFTPPEYLRTG----------R-VTPESVMYSFGTLLLDLLSG-KHIPPSHALDLIRDRNIQTLTD  270 (359)
Q Consensus       211 --------~~~~t~~y~aPE~~~~~----------~-~~~~~Di~slG~il~elltg-~~p~~~~~~~~~~~~~~~~~~~  270 (359)
                              +...-.+|.|||.+...          . .+++.||||+||++.||++. +++|.-...-..+.+. .....
T Consensus       178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~-~~~~e  256 (1431)
T KOG1240|consen  178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGN-ADDPE  256 (1431)
T ss_pred             ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccC-ccCHH
Confidence                    11112479999987541          2 67899999999999999886 4444433222222221 11111


Q ss_pred             ccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          271 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       271 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      ..+. .+   ....+++|+..|++.||++|.|+++.|+.-+++
T Consensus       257 ~~Le-~I---ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~  295 (1431)
T KOG1240|consen  257 QLLE-KI---EDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGL  295 (1431)
T ss_pred             HHHH-hC---cCccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence            1111 11   123699999999999999999999999874443

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.92  E-value=1.4e-24  Score=182.59  Aligned_cols=140  Identities=16%  Similarity=0.156  Sum_probs=110.1

Q ss_pred             cccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc--h------------------------HHHHHHHHHHHhcCCCccc
Q 018244           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--D------------------------ARQFLEEARAVGQLRNRRL  115 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~e~~~l~~l~h~ni  115 (359)
                      .+.||+|++|.||+|...+|+.||||+++.....  .                        .....+|++.+..+.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            4568999999999999778999999999754211  0                        0122359999999988877


Q ss_pred             ccccceeeeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCcccccCCCCCeeeCCCCC
Q 018244          116 ANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC-TSKERALYHDLNAYRIVFDDDVN  194 (359)
Q Consensus       116 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L-H~~~~ivH~Dikp~NIll~~~~~  194 (359)
                      .....+..  ...+|||||++++++.....  ....++...+..++.|++.+|.++ |+. |++||||||+|||++ ++.
T Consensus        82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~-giiHrDlkP~NIli~-~~~  155 (190)
T cd05147          82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDC-RLVHADLSEYNLLYH-DGK  155 (190)
T ss_pred             CCCcEEEe--cCCEEEEEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEE-CCc
Confidence            54433322  23489999999877765533  345789999999999999999999 688 999999999999998 578


Q ss_pred             eEEeccCCcccCC
Q 018244          195 PRLSCFGLMKNSR  207 (359)
Q Consensus       195 ~kl~DFg~a~~~~  207 (359)
                      ++|+|||++....
T Consensus       156 v~LiDFG~a~~~~  168 (190)
T cd05147         156 LYIIDVSQSVEHD  168 (190)
T ss_pred             EEEEEccccccCC
Confidence            9999999987543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.91  E-value=1.3e-24  Score=185.14  Aligned_cols=169  Identities=11%  Similarity=0.035  Sum_probs=131.9

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHH---------HHHHHHHHHhcCCCcccccccceeeeC--
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDAR---------QFLEEARAVGQLRNRRLANLLGCCCEG--  125 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~---------~~~~e~~~l~~l~h~niv~~~~~~~~~--  125 (359)
                      ..|+.++.+|.|+||.||.+.. ++..+|+|.+.........         .+.+|++.+.++.|++|..+.+++...  
T Consensus        31 ~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~  109 (232)
T PRK10359         31 YNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAER  109 (232)
T ss_pred             CceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccc
Confidence            3578888899999999999766 4567999999755433222         267899999999999999999886643  


Q ss_pred             ------CcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEec
Q 018244          126 ------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC  199 (359)
Q Consensus       126 ------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~D  199 (359)
                            ...+|+|||++|.+|.++..      ++.    ....+++.+|..+|+. |++|+|+||+||+++.+| ++|+|
T Consensus       110 ~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~-gi~H~Dikp~Nili~~~g-i~liD  177 (232)
T PRK10359        110 KTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQH-GMVSGDPHKGNFIVSKNG-LRIID  177 (232)
T ss_pred             ccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHc-CCccCCCChHHEEEeCCC-EEEEE
Confidence                  35789999999999988642      233    2456999999999999 999999999999999888 99999


Q ss_pred             cCCcccCCCCCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHH
Q 018244          200 FGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL  246 (359)
Q Consensus       200 Fg~a~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell  246 (359)
                      ||...........        ..++....|+.++|+||||+++..+.
T Consensus       178 fg~~~~~~e~~a~--------d~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        178 LSGKRCTAQRKAK--------DRIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             CCCcccccchhhH--------HHHHHHhHhcccccccceeEeehHHH
Confidence            9987655322211        11334455778999999999887654

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.91  E-value=1.9e-23  Score=180.39  Aligned_cols=251  Identities=16%  Similarity=0.196  Sum_probs=197.1

Q ss_pred             cccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEEEecC
Q 018244           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .|++-++||.|+||.++.|+ +-+++.||||.-...+  ...++..|.+..+.|. .++|...+.+..++-+-.||+|++
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL  106 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL  106 (449)
T ss_pred             cceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence            46788889999999999998 6688999999876543  3456777888888874 799999999888888899999998


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC-----CCeEEeccCCcccCCCC-
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-----VNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~-----~~~kl~DFg~a~~~~~~-  209 (359)
                       |-||.|++ +..++.++..++..++.|++.-++|+|.+ .+|+|||||+|+||..-     ..+.++|||+|+...+. 
T Consensus       107 -GPSLEDLF-D~CgR~FSvKTV~miA~Qmi~rie~vH~k-~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~  183 (449)
T KOG1165|consen  107 -GPSLEDLF-DLCGRRFSVKTVAMIAKQMITRIEYVHEK-DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK  183 (449)
T ss_pred             -CcCHHHHH-HHhcCcccHHhHHHHHHHHHHHHHHHHhc-ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence             66999977 45788999999999999999999999999 99999999999999743     35999999999875443 


Q ss_pred             ----------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCC---
Q 018244          210 ----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ---  276 (359)
Q Consensus       210 ----------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---  276 (359)
                                ++..||.+||+=-...+...+..-|+=|||-++++.|.|.-|+++-..+..++.- +.+-+. .+..   
T Consensus       184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kY-eKIGe~-Kr~T~i~  261 (449)
T KOG1165|consen  184 TKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKY-EKIGET-KRSTPIE  261 (449)
T ss_pred             ccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHH-HHhccc-cccCCHH
Confidence                      3457899999988888888899999999999999999999888765444333211 111111 1111   


Q ss_pred             -CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          277 -FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       277 -~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                       .-...+.++..-+...-..+-++-|+.+-+...+..+.+
T Consensus       262 ~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld  301 (449)
T KOG1165|consen  262 VLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD  301 (449)
T ss_pred             HHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence             112356677778888888888888988877666555543

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.90  E-value=5e-25  Score=205.07  Aligned_cols=224  Identities=16%  Similarity=0.168  Sum_probs=189.0

Q ss_pred             CCCCCCcEEEEEE----eCCCcEEEEEEeCCCCCch--HHHHHHHHHHHhcCC-CcccccccceeeeCCcceEEEecCCC
Q 018244           65 HGEKAPNVVYKGK----LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPN  137 (359)
Q Consensus        65 lg~G~~g~Vy~~~----~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~  137 (359)
                      +|.|+||.|+.+.    .+.|..+|+|+.++.....  ......|..++..++ ||.+|+++..++.+...+++.++..+
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg   81 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG   81 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence            6999999999875    2357889999987653221  113456888888887 99999999999999999999999999


Q ss_pred             CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCcCCCcc
Q 018244          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA  217 (359)
Q Consensus       138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~t~~  217 (359)
                      |.|...+.  +...+++.....+...++.|+.++|.. +++|+|+|++||+++.+|.+++.|||+++..-..+..+||..
T Consensus        82 g~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l-~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~e  158 (612)
T KOG0603|consen   82 GDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKL-GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYE  158 (612)
T ss_pred             chhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchh-HHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchh
Confidence            99988875  556678888899999999999999999 999999999999999999999999999998777776799999


Q ss_pred             ccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCC
Q 018244          218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP  297 (359)
Q Consensus       218 y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp  297 (359)
                      |||||++.  ....++|.||||+++++|+||..||..+....+        ..  .....+...+..+.+++..++..+|
T Consensus       159 ymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~~~~I--------l~--~~~~~p~~l~~~a~~~~~~l~~r~p  226 (612)
T KOG0603|consen  159 YRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDTMKRI--------LK--AELEMPRELSAEARSLFRQLFKRNP  226 (612)
T ss_pred             hhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHHHHHH--------hh--hccCCchhhhHHHHHHHHHHHhhCH
Confidence            99999998  668899999999999999999999887332222        11  1223567888999999999999999


Q ss_pred             CCCCCH
Q 018244          298 RERPNP  303 (359)
Q Consensus       298 ~~Rps~  303 (359)
                      ..|.-.
T Consensus       227 ~nrLg~  232 (612)
T KOG0603|consen  227 ENRLGA  232 (612)
T ss_pred             HHHhcc
Confidence            999755

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.90  E-value=3.2e-23  Score=174.84  Aligned_cols=141  Identities=15%  Similarity=0.133  Sum_probs=112.2

Q ss_pred             cccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCch--------------------------HHHHHHHHHHHhcCCCccc
Q 018244           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--------------------------ARQFLEEARAVGQLRNRRL  115 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~e~~~l~~l~h~ni  115 (359)
                      .+.||+|++|.||+|...+|..||||++.......                          .....+|.+.+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            45689999999999997789999999988652110                          1123578999999999988


Q ss_pred             ccccceeeeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCCCeeeCCCCC
Q 018244          116 ANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVN  194 (359)
Q Consensus       116 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~ivH~Dikp~NIll~~~~~  194 (359)
                      .....+...  ..+|||||++++++.....  ....++......++.|++.++.++|+ . |++||||||+||+++ ++.
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~-givHrDlkP~NIll~-~~~  155 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEA-GLVHGDLSEYNILYH-DGK  155 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhC-CEecCCCChhhEEEE-CCC
Confidence            655544433  3489999999875544322  33467888999999999999999999 8 999999999999999 889


Q ss_pred             eEEeccCCcccCCC
Q 018244          195 PRLSCFGLMKNSRD  208 (359)
Q Consensus       195 ~kl~DFg~a~~~~~  208 (359)
                      ++|+|||++.....
T Consensus       156 ~~liDFG~a~~~~~  169 (190)
T cd05145         156 PYIIDVSQAVELDH  169 (190)
T ss_pred             EEEEEcccceecCC
Confidence            99999999876543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.88  E-value=2.1e-22  Score=187.34  Aligned_cols=210  Identities=22%  Similarity=0.335  Sum_probs=164.9

Q ss_pred             HhcCCCcccccccceeeeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCC
Q 018244          107 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR  186 (359)
Q Consensus       107 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~N  186 (359)
                      |+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+.. ....+++.....++++++.||.|||+...-+|+.+++.|
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n   79 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN   79 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence            4678899999999999999999999999999999999965 577899999999999999999999998333999999999


Q ss_pred             eeeCCCCCeEEeccCCcccCCCC------CCcCCCccccCcccccCCC-------CCCccchhhHHHHHHHHHhCCCCCC
Q 018244          187 IVFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGR-------VTPESVMYSFGTLLLDLLSGKHIPP  253 (359)
Q Consensus       187 Ill~~~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~-------~~~~~Di~slG~il~elltg~~p~~  253 (359)
                      .++|.+..+||+|||+.......      .......-|.|||.+....       .+.+.||||||++++|+++...||.
T Consensus        80 Clvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~  159 (484)
T KOG1023|consen   80 CLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFD  159 (484)
T ss_pred             ceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccc
Confidence            99999999999999998776431      1112245799999988642       4667999999999999999999987


Q ss_pred             cchhHHHhhhhhhhhcc---ccccCCCC--hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 018244          254 SHALDLIRDRNIQTLTD---SCLEGQFS--SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT  317 (359)
Q Consensus       254 ~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~  317 (359)
                      ..............+.+   ...++...  .+..+++..++.+||..+|++||+++.+-..++.+....
T Consensus       160 ~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~  228 (484)
T KOG1023|consen  160 LRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG  228 (484)
T ss_pred             cccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence            64332221111111111   11111111  144557999999999999999999999999988887654

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.87  E-value=9.6e-23  Score=178.73  Aligned_cols=228  Identities=19%  Similarity=0.166  Sum_probs=146.9

Q ss_pred             ccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCC---c-------cccccccee----
Q 018244           61 IVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRN---R-------RLANLLGCC----  122 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h---~-------niv~~~~~~----  122 (359)
                      ..+.||.|+++.||.++.. +++.+|||++.....   ...+++.+|.-....+.+   |       .++.-++..    
T Consensus        16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~   95 (288)
T PF14531_consen   16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG   95 (288)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred             EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence            3455799999999999964 589999999875442   235566666655555432   1       122222222    


Q ss_pred             -----eeCC--------cceEEEecCCCCCHhhhhhc---CCC--CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCC
Q 018244          123 -----CEGD--------ERLLVAEYMPNDTLAKHLFH---WET--QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA  184 (359)
Q Consensus       123 -----~~~~--------~~~lv~e~~~~gsL~~~l~~---~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp  184 (359)
                           ....        +.+++|+-+.+ +|.+++..   ...  ..+....+..+..|+++.+++||+. |++|+||+|
T Consensus        96 ~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~-GlVHgdi~~  173 (288)
T PF14531_consen   96 KPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY-GLVHGDIKP  173 (288)
T ss_dssp             S-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-TEEEST-SG
T ss_pred             CCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc-ceEecccce
Confidence                 1111        34778887744 78877642   111  1234556678889999999999999 999999999


Q ss_pred             CCeeeCCCCCeEEeccCCcccCCCCCC-cCCCccccCcccccCC--------CCCCccchhhHHHHHHHHHhCCCCCCcc
Q 018244          185 YRIVFDDDVNPRLSCFGLMKNSRDGRS-YSTNLAFTPPEYLRTG--------RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (359)
Q Consensus       185 ~NIll~~~~~~kl~DFg~a~~~~~~~~-~~~t~~y~aPE~~~~~--------~~~~~~Di~slG~il~elltg~~p~~~~  255 (359)
                      +|++++.+|.+.|+||+.....+.... ...+..|.|||.....        .++.+.|.|+||+++|.|+++.-||...
T Consensus       174 ~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~  253 (288)
T PF14531_consen  174 ENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLS  253 (288)
T ss_dssp             GGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCC
T ss_pred             eeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCC
Confidence            999999999999999987765544332 3445789999976432        4788999999999999999999887654


Q ss_pred             hhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCC
Q 018244          256 ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER  300 (359)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R  300 (359)
                      ........         ...... +.++.++.||..+|+.||++|
T Consensus       254 ~~~~~~~~---------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  254 SPEADPEW---------DFSRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             GGGSTSGG---------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             Cccccccc---------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence            32211111         111223 778899999999999999988

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=7.1e-22  Score=174.47  Aligned_cols=192  Identities=16%  Similarity=0.153  Sum_probs=146.2

Q ss_pred             CCcccccccceeee---------------------------CCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHH
Q 018244          111 RNRRLANLLGCCCE---------------------------GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALH  163 (359)
Q Consensus       111 ~h~niv~~~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~q  163 (359)
                      +|||||+++++|.+                           +..+|+||..++. +|..++   ..+..+.....-++.|
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl---~~~~~s~r~~~~~laQ  349 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYL---WTRHRSYRTGRVILAQ  349 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHH---hcCCCchHHHHHHHHH
Confidence            69999999998854                           1346999998876 899999   5566778888899999


Q ss_pred             HHHHHHHhhcCCCcccccCCCCCeeeC--CC--CCeEEeccCCcccCCCC----------CCcCCCccccCcccccCCC-
Q 018244          164 IAEALEYCTSKERALYHDLNAYRIVFD--DD--VNPRLSCFGLMKNSRDG----------RSYSTNLAFTPPEYLRTGR-  228 (359)
Q Consensus       164 i~~~L~~LH~~~~ivH~Dikp~NIll~--~~--~~~kl~DFg~a~~~~~~----------~~~~~t~~y~aPE~~~~~~-  228 (359)
                      +++|+.|||.+ ||.|||+|.+|||+.  ++  ..+.|+|||.+--.+..          -...|.-.-||||+....+ 
T Consensus       350 lLEav~hL~~h-gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG  428 (598)
T KOG4158|consen  350 LLEAVTHLHKH-GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG  428 (598)
T ss_pred             HHHHHHHHHHc-cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence            99999999999 999999999999993  33  45899999986533321          1223566789999987432 


Q ss_pred             -----CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCH
Q 018244          229 -----VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP  303 (359)
Q Consensus       229 -----~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~  303 (359)
                           -..++|.|+.|.+-||+++...||+............++-    ..+..+..+++.+++|+...|+.||.+|++.
T Consensus       429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~----qLPalp~~vpp~~rqlV~~lL~r~pskRvsp  504 (598)
T KOG4158|consen  429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQES----QLPALPSRVPPVARQLVFDLLKRDPSKRVSP  504 (598)
T ss_pred             CceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhh----hCCCCcccCChHHHHHHHHHhcCCccccCCc
Confidence                 2358999999999999999999998743333322222211    1123456677889999999999999999988


Q ss_pred             HHHHHHHH
Q 018244          304 RSLVTALV  311 (359)
Q Consensus       304 ~~il~~L~  311 (359)
                      .-+-+.|.
T Consensus       505 ~iAANvl~  512 (598)
T KOG4158|consen  505 NIAANVLN  512 (598)
T ss_pred             cHHHhHHH
Confidence            76665544

>PRK10345 hypothetical protein; Provisional

Probab=99.87  E-value=8.2e-22  Score=167.34  Aligned_cols=132  Identities=14%  Similarity=0.120  Sum_probs=104.5

Q ss_pred             ccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-----CCcccccccceeeeCC---cce-EEEe
Q 018244           63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-----RNRRLANLLGCCCEGD---ERL-LVAE  133 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~~~~~~~~---~~~-lv~e  133 (359)
                      ..||+|+||.||. ...++. .+||++........+.+.+|+.+++.+     .||||+++++++.++.   .++ +|+|
T Consensus         8 ~~LG~G~~~~Vy~-hp~~~~-k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e   85 (210)
T PRK10345          8 SPLGTGRHRKCYA-HPEDAQ-RCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIAD   85 (210)
T ss_pred             ceecCCCceEEEE-CCCCcC-eEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEec
Confidence            4569999999996 323343 479998765545567799999999999     5799999999998864   333 7899


Q ss_pred             c--CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHH-HHhhcCCCcccccCCCCCeeeCC----CCCeEEeccCC
Q 018244          134 Y--MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEAL-EYCTSKERALYHDLNAYRIVFDD----DVNPRLSCFGL  202 (359)
Q Consensus       134 ~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L-~~LH~~~~ivH~Dikp~NIll~~----~~~~kl~DFg~  202 (359)
                      |  +.+|+|.+++.+   ..+++.  ..++.|++.++ +|||++ +|+||||||+|||++.    ++.++|+||+.
T Consensus        86 ~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~-~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G  155 (210)
T PRK10345         86 FDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDN-RIVTMELKPQNILCQRISESEVIPVVCDNIG  155 (210)
T ss_pred             CCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence            9  557999999953   346655  35678888888 999999 9999999999999973    34799999543

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.87  E-value=1.8e-21  Score=162.41  Aligned_cols=179  Identities=15%  Similarity=0.098  Sum_probs=135.5

Q ss_pred             ccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCch----HHHHHHHHHHHhcCC-CcccccccceeeeCCcceEEEecC
Q 018244           61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD----ARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      +...|++|+||+||.+.. .+..++.+.+.....-.    ...+.+|+++|++|. |+++++++++    +..+++|||+
T Consensus         6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI   80 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL   80 (218)
T ss_pred             cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence            345679999999997776 56678878777654321    124788999999995 5889999886    3569999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccC-CCCCeeeCCCCCeEEeccCCcccCCCCCCc--
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL-NAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--  212 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Di-kp~NIll~~~~~~kl~DFg~a~~~~~~~~~--  212 (359)
                      .|.+|.+.+.   ..      ...++.|++.+|.++|+. ||+|||| ||+|||++.++.++|+|||++.........  
T Consensus        81 ~G~~L~~~~~---~~------~~~~~~qi~~~L~~lH~~-GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r  150 (218)
T PRK12274         81 AGAAMYQRPP---RG------DLAYFRAARRLLQQLHRC-GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMR  150 (218)
T ss_pred             cCccHHhhhh---hh------hHHHHHHHHHHHHHHHHC-cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHH
Confidence            9988875442   11      135778999999999999 9999999 799999999999999999999865543310  


Q ss_pred             ---------------CCCccccCcccccCC-CCC-CccchhhHHHHHHHHHhCCCCCCc
Q 018244          213 ---------------STNLAFTPPEYLRTG-RVT-PESVMYSFGTLLLDLLSGKHIPPS  254 (359)
Q Consensus       213 ---------------~~t~~y~aPE~~~~~-~~~-~~~Di~slG~il~elltg~~p~~~  254 (359)
                                     ..++.|+.|+...-. ..+ ...+.++.|.-+|.++|++-+...
T Consensus       151 ~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~  209 (218)
T PRK12274        151 LLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE  209 (218)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence                           124567777643321 233 467899999999999999976543

>smart00090 RIO RIO-like kinase

Probab=99.85  E-value=6e-21  Score=165.90  Aligned_cols=157  Identities=14%  Similarity=0.037  Sum_probs=118.1

Q ss_pred             CHHHHHHHhcCCCcccccccCCCCCCcEEEEEE--eCCCcEEEEEEeCCCCCc------------------------hHH
Q 018244           45 SIETLRTATSGFAMENIVSEHGEKAPNVVYKGK--LENQFRIAVKRFNRSAWP------------------------DAR   98 (359)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~------------------------~~~   98 (359)
                      +..++.+..+.-..|.+.+.||.|++|.||+|.  ..+|..||+|++......                        ...
T Consensus        16 ~~~~~~~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (237)
T smart00090       16 TRLALYSLLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRL   95 (237)
T ss_pred             HHHHHHHHHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHH
Confidence            344555555555567888999999999999998  568999999998754311                        012


Q ss_pred             HHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-c
Q 018244           99 QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER-A  177 (359)
Q Consensus        99 ~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~-i  177 (359)
                      .+.+|+.++..+.+.+ +.+...+.. ...+|||||+++++|.....  ....+.......++.|++.+|.+||+. | +
T Consensus        96 ~~~~E~~~L~~L~~~~-i~~p~~~~~-~~~~lV~E~~~g~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~-g~i  170 (237)
T smart00090       96 WAEKEFRNLQRLYEAG-VPVPKPIAW-RRNVLVMEFIGGDGLPAPRL--KDVEPEEEEEFELYDDILEEMRKLYKE-GEL  170 (237)
T ss_pred             HHHHHHHHHHHHHhcC-CCCCeeeEe-cCceEEEEEecCCccccccc--ccCCcchHHHHHHHHHHHHHHHHHHhc-CCE
Confidence            3567999999997532 222222222 24589999999988876543  233456667789999999999999999 8 9


Q ss_pred             ccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          178 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       178 vH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      +|+||||+||+++ ++.++|+|||.+....
T Consensus       171 iH~Dikp~NIli~-~~~i~LiDFg~a~~~~  199 (237)
T smart00090      171 VHGDLSEYNILVH-DGKVVIIDVSQSVELD  199 (237)
T ss_pred             EeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence            9999999999999 8899999999987543

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=5.8e-21  Score=189.60  Aligned_cols=241  Identities=17%  Similarity=0.130  Sum_probs=176.9

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC---CcccccccceeeeCCcceEEEe
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ..|.+-+.+|.|+||+||.|+..+|+.||+|+-+....-.   |+=-.+++.+|+   -+.|..+...+...+.-+||+|
T Consensus       698 ~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~e  774 (974)
T KOG1166|consen  698 EKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSE  774 (974)
T ss_pred             eeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCcceeeee
Confidence            4567778899999999999998789999999887654221   122244455554   3456666666667778899999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC-------CCCCeEEeccCCccc-
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-------DDVNPRLSCFGLMKN-  205 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~-------~~~~~kl~DFg~a~~-  205 (359)
                      |.+.|||.+++.  ....++|.....++.|++..+.+||.. +|||+||||+|.||.       +...++|+|||-+-. 
T Consensus       775 y~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~-~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm  851 (974)
T KOG1166|consen  775 YSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAM-GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM  851 (974)
T ss_pred             ccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhc-ceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence            999999999996  667899999999999999999999999 999999999999993       345699999998754 


Q ss_pred             --CCCCC---CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChH
Q 018244          206 --SRDGR---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD  280 (359)
Q Consensus       206 --~~~~~---~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (359)
                        +.++.   ...+|-.+-.+|+..|.+++..+|.|.|+.+++.||.|+..-       ...+.......     .++..
T Consensus       852 ~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-------~~~g~~~~~~~-----~~~Ry  919 (974)
T KOG1166|consen  852 KLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-------VKNGSSWMVKT-----NFPRY  919 (974)
T ss_pred             eEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-------hcCCcceeccc-----cchhh
Confidence              33332   335678899999999999999999999999999999998321       11111111111     01122


Q ss_pred             HHHH-HHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          281 EGTE-LVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       281 ~~~~-l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      ...+ ..+++..+|..|-..=|...++...|+....
T Consensus       920 ~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~  955 (974)
T KOG1166|consen  920 WKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLA  955 (974)
T ss_pred             hhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHH
Confidence            2222 3355666666444444777777777777654

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.83  E-value=3.6e-21  Score=176.20  Aligned_cols=229  Identities=19%  Similarity=0.247  Sum_probs=152.5

Q ss_pred             cCCCCCCcEEEEEEeCC----CcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccc-------eeee-----CCc
Q 018244           64 EHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG-------CCCE-----GDE  127 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~-------~~~~-----~~~  127 (359)
                      ..+.++++.++.....+    ...++.+..............+++-.+....|.+..-+.+       .+..     ...
T Consensus       251 ~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~~~~  330 (516)
T KOG1033|consen  251 SSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGKKVY  330 (516)
T ss_pred             cccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhccccccccccc
Confidence            34555555555544222    2333444433333233344455666666655444333322       1111     235


Q ss_pred             ceEEEecCCCCCHhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          128 RLLVAEYMPNDTLAKHLFHW-ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      +||.|++|...+|.+++.++ .....++.....++.|++.|+.|   + +.+|+|+||.||++..+..+||+|||+....
T Consensus       331 lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k-~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~  406 (516)
T KOG1033|consen  331 LYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K-GLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ  406 (516)
T ss_pred             hhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c-cchhhhccccccccccchhhhhhhhhheeec
Confidence            88999999999999999743 34467888999999999999999   6 9999999999999999999999999997765


Q ss_pred             CCC----------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccC
Q 018244          207 RDG----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEG  275 (359)
Q Consensus       207 ~~~----------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  275 (359)
                      ...          ....||..||+||.+.+..|+.++||||||++|+||++ -...+.       .......+.+..+.+
T Consensus       407 ~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e-------r~~t~~d~r~g~ip~  479 (516)
T KOG1033|consen  407 DKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE-------RIATLTDIRDGIIPP  479 (516)
T ss_pred             ccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH-------HHHhhhhhhcCCCCh
Confidence            433          24568999999999999999999999999999999997 121111       111111111111111


Q ss_pred             CCChHHHHHHHHHHHHhcccCCCCCCCHH
Q 018244          276 QFSSDEGTELVRLASRCLQYEPRERPNPR  304 (359)
Q Consensus       276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~  304 (359)
                      .+ ..-.+.-..|+.+++...|.+||++.
T Consensus       480 ~~-~~d~p~e~~ll~~lls~~p~~RP~~~  507 (516)
T KOG1033|consen  480 EF-LQDYPEEYTLLQQLLSPSPEERPSAI  507 (516)
T ss_pred             HH-hhcCcHHHHHHHHhcCCCcccCchHH
Confidence            11 01123456899999999999999443

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.83  E-value=7.7e-20  Score=157.06  Aligned_cols=134  Identities=16%  Similarity=0.164  Sum_probs=112.9

Q ss_pred             ccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCch--------HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--------ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      +.||+|++|.||+|.. .|..+++|+........        ...+.+|+.++..+.|+++.....++...+..+++|||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            4679999999999987 55679999866432211        23577899999999999998888887778889999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCccc
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~  205 (359)
                      ++|++|.+++...     .+ .+..++.+++.+|.++|+. +++|+|++|+||+++ ++.++|+|||.+..
T Consensus        81 ~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~-~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         81 IEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSA-GIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             eCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhC-CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            9999999988531     12 7889999999999999999 999999999999999 78999999998764

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.82  E-value=1.6e-20  Score=183.59  Aligned_cols=202  Identities=18%  Similarity=0.172  Sum_probs=145.9

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .+++.|+.+..|+||.||.++++ ..+++|+| +++...     +.+.  +|.....|               +.|    
T Consensus        83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-----ilRn--ilt~a~np---------------fvv----  135 (1205)
T KOG0606|consen   83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-----ILRN--ILTFAGNP---------------FVV----  135 (1205)
T ss_pred             cccceeEeeccCCCCceeeeeccccccchhhc-ccccch-----hhhc--cccccCCc---------------cee----
Confidence            35567777899999999999854 46789994 443221     1111  22222222               222    


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC-------
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-------  208 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~-------  208 (359)
                        |+-...++  .-+.++..        ++.+++|||+. +|+|||+||+|.+|+.-|.+|++|||+.+..-.       
T Consensus       136 --gDc~tllk--~~g~lPvd--------mvla~Eylh~y-givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~  202 (1205)
T KOG0606|consen  136 --GDCATLLK--NIGPLPVD--------MVLAVEYLHSY-GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLK  202 (1205)
T ss_pred             --chhhhhcc--cCCCCcch--------hhHHhHhhccC-CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhh
Confidence              33334443  22233322        27899999999 999999999999999999999999999764211       


Q ss_pred             ------------CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCC
Q 018244          209 ------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ  276 (359)
Q Consensus       209 ------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  276 (359)
                                  ++...||+.|+|||++....|...+|+|++|+|+||.+-|..||.++.-+.+....+...+.   ...
T Consensus       203 eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~---wpE  279 (1205)
T KOG0606|consen  203 EGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE---WPE  279 (1205)
T ss_pred             hcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcc---ccc
Confidence                        12357899999999999999999999999999999999999999988666555444333322   122


Q ss_pred             CChHHHHHHHHHHHHhcccCCCCCC
Q 018244          277 FSSDEGTELVRLASRCLQYEPRERP  301 (359)
Q Consensus       277 ~~~~~~~~l~~li~~cl~~dp~~Rp  301 (359)
                      -......++++++.++|+.+|..|.
T Consensus       280 ~dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  280 EDEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             cCcCCCHHHHHHHHHHHHhChHhhc
Confidence            2445678899999999999999995

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.81  E-value=1.1e-19  Score=154.63  Aligned_cols=130  Identities=18%  Similarity=0.212  Sum_probs=107.0

Q ss_pred             CCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc--------hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           65 HGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        65 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      ||+|++|.||+|.+ ++..+++|........        ....+.+|++++..+.|+++.....++...+..++||||++
T Consensus         2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence            69999999999985 5567999986543211        12456789999999998887666666667778899999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      |++|.+++...   ..      .++.+++.+|.+||+. +++|+|++|+||+++ ++.++++|||++...
T Consensus        81 g~~l~~~~~~~---~~------~~~~~i~~~l~~lH~~-gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724        81 GKPLKDVIEEG---ND------ELLREIGRLVGKLHKA-GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             CccHHHHHhhc---HH------HHHHHHHHHHHHHHHC-CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence            99999887421   11      7899999999999999 999999999999999 889999999998653

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.81  E-value=3.9e-19  Score=151.07  Aligned_cols=138  Identities=17%  Similarity=0.129  Sum_probs=108.4

Q ss_pred             cccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc----------------------hHHHHHHHHHHHhcCCCcc-
Q 018244           58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP----------------------DARQFLEEARAVGQLRNRR-  114 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~e~~~l~~l~h~n-  114 (359)
                      .|.+.+.||.|+||.||++...+|..||||++......                      ......+|+.++..+.|++ 
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            36677888999999999999878999999987643210                      0113567888999988774 


Q ss_pred             -cccccceeeeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC
Q 018244          115 -LANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV  193 (359)
Q Consensus       115 -iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~  193 (359)
                       ++..++    ....++||||+++++|.....   .     .....++.+++.++.++|+. +++|+||||+||++++++
T Consensus        96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~---~-----~~~~~~~~~i~~~l~~lh~~-gi~H~Dl~p~Nill~~~~  162 (198)
T cd05144          96 PVPKPID----WNRHAVVMEYIDGVELYRVRV---L-----EDPEEVLDEILEEIVKAYKH-GIIHGDLSEFNILVDDDE  162 (198)
T ss_pred             CCCceee----cCCceEEEEEeCCcchhhccc---c-----ccHHHHHHHHHHHHHHHHHC-CCCcCCCCcccEEEcCCC
Confidence             333333    245689999999998876542   0     34567889999999999998 999999999999999999


Q ss_pred             CeEEeccCCcccCCC
Q 018244          194 NPRLSCFGLMKNSRD  208 (359)
Q Consensus       194 ~~kl~DFg~a~~~~~  208 (359)
                      .++|+|||++.....
T Consensus       163 ~~~liDfg~~~~~~~  177 (198)
T cd05144         163 KIYIIDWPQMVSTDH  177 (198)
T ss_pred             cEEEEECCccccCCC
Confidence            999999999865543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.79  E-value=6.5e-19  Score=171.56  Aligned_cols=134  Identities=19%  Similarity=0.175  Sum_probs=108.6

Q ss_pred             cccccCCCCCCcEEEEEEeCCCcEEEEEEe-CCC-CCc------hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRF-NRS-AWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        60 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~-~~~-~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      ...+.||+|+||+||+|.+.... +++|+. ... ...      ..+.+.+|++++..++|++++....++......++|
T Consensus       336 ~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv  414 (535)
T PRK09605        336 IPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIV  414 (535)
T ss_pred             CccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEE
Confidence            34566799999999999875543 444432 211 111      124578899999999999999888887777788999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      |||+++++|.+++.          ....++.+++.+|.+||+. +++||||||+|||+ +++.++|+|||+++..
T Consensus       415 ~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~-giiHrDlkp~NILl-~~~~~~liDFGla~~~  477 (535)
T PRK09605        415 MEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKA-GIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             EEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhC-CCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence            99999999999873          3567899999999999999 99999999999999 6789999999998753

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.75  E-value=3.5e-18  Score=138.23  Aligned_cols=135  Identities=15%  Similarity=0.037  Sum_probs=113.0

Q ss_pred             ccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCC--cccccccceeeeCCcceEEEecCCCC
Q 018244           61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN--RRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      +++.+|.|.++.||++...+ ..+++|.+.....  ...+.+|+.++..++|  .++++++++....+..+++|||++++
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~   78 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE   78 (155)
T ss_pred             cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence            34667999999999999755 6799999876543  4568889999999976  58899988888778899999999887


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC--CCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK--ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      .+..+         +......++.+++.+|+++|..  .+++|+|++|+||+++..+.++++|||.+....
T Consensus        79 ~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~  140 (155)
T cd05120          79 TLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGP  140 (155)
T ss_pred             ecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCC
Confidence            66543         5567788899999999999985  269999999999999998999999999876543

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.74  E-value=1.4e-17  Score=140.21  Aligned_cols=138  Identities=15%  Similarity=0.131  Sum_probs=97.0

Q ss_pred             cccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCch--HHHH----------------------HHHHHHHhcCCCcc--c
Q 018244           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--ARQF----------------------LEEARAVGQLRNRR--L  115 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~----------------------~~e~~~l~~l~h~n--i  115 (359)
                      .+.||+|+||.||+|...++..||||++.......  ...+                      ..|...+..+.+..  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            35679999999999997788999999987543211  1111                      24555555554332  2


Q ss_pred             ccccceeeeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCCCeeeCCCCC
Q 018244          116 ANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVN  194 (359)
Q Consensus       116 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~ivH~Dikp~NIll~~~~~  194 (359)
                      .+.++.    ...++||||++++.+......  ..... ..+..++.+++.++.++|. . +++|+||||+||+++ ++.
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~--~~~~~-~~~~~~~~~~~~~l~~lh~~~-~ivH~Dl~p~Nili~-~~~  152 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRLK--DVRLL-EDPEELYDQILELMRKLYREA-GLVHGDLSEYNILVD-DGK  152 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhhh--hhhhc-ccHHHHHHHHHHHHHHHhhcc-CcCcCCCChhhEEEE-CCc
Confidence            333322    246899999998544321111  10111 6678899999999999999 7 999999999999999 899


Q ss_pred             eEEeccCCcccCCC
Q 018244          195 PRLSCFGLMKNSRD  208 (359)
Q Consensus       195 ~kl~DFg~a~~~~~  208 (359)
                      ++|+|||.+.....
T Consensus       153 ~~liDfg~a~~~~~  166 (187)
T cd05119         153 VYIIDVPQAVEIDH  166 (187)
T ss_pred             EEEEECcccccccC
Confidence            99999999865443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.74  E-value=2.3e-17  Score=143.79  Aligned_cols=133  Identities=17%  Similarity=0.145  Sum_probs=102.3

Q ss_pred             CC-CCCCcEEEEEEeCCCcEEEEEEeCCCCC-------------chHHHHHHHHHHHhcCCCccc--ccccceeeeCCc-
Q 018244           65 HG-EKAPNVVYKGKLENQFRIAVKRFNRSAW-------------PDARQFLEEARAVGQLRNRRL--ANLLGCCCEGDE-  127 (359)
Q Consensus        65 lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~~~~-  127 (359)
                      +| .|+.|+||.+... +..++||.+.....             .....+.+|++++..|.|+++  +..+++...... 
T Consensus        39 lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~  117 (239)
T PRK01723         39 VGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGL  117 (239)
T ss_pred             eecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCc
Confidence            46 7888889999875 55799998864221             123457889999999998875  666665443222 


Q ss_pred             ---ceEEEecCCC-CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCc
Q 018244          128 ---RLLVAEYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (359)
Q Consensus       128 ---~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a  203 (359)
                         .++||||+++ .+|.+++.   ...++...    +.+++.+|.+||+. ||+|+||||+|||++.++.++|+|||.+
T Consensus       118 ~~~~~lV~e~l~G~~~L~~~l~---~~~l~~~~----~~~i~~~l~~lH~~-GI~HrDlkp~NILv~~~~~v~LIDfg~~  189 (239)
T PRK01723        118 FYRADILIERIEGARDLVALLQ---EAPLSEEQ----WQAIGQLIARFHDA-GVYHADLNAHNILLDPDGKFWLIDFDRG  189 (239)
T ss_pred             ceeeeEEEEecCCCCCHHHHHh---cCCCCHHH----HHHHHHHHHHHHHC-CCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence               2599999997 68988874   23455543    57899999999999 9999999999999999889999999987


Q ss_pred             ccC
Q 018244          204 KNS  206 (359)
Q Consensus       204 ~~~  206 (359)
                      ...
T Consensus       190 ~~~  192 (239)
T PRK01723        190 ELR  192 (239)
T ss_pred             ccC
Confidence            653

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.74  E-value=4.3e-19  Score=172.61  Aligned_cols=248  Identities=13%  Similarity=0.118  Sum_probs=188.5

Q ss_pred             CcccccccCCCCCCcEEEEEEe--CCCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv  131 (359)
                      ..|.+++.+|+|+|+.|-....  .....+|+|.+....  .........|..+-+.+. |+|++.+++.....+..+++
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~   99 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS   99 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence            4566777789999999988874  335567777776553  222334455777777786 99999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhh-cCCCcccccCCCCCeeeCCCC-CeEEeccCCcccCCC-
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT-SKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRD-  208 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~~ivH~Dikp~NIll~~~~-~~kl~DFg~a~~~~~-  208 (359)
                      ++|..++++.+-+........+......++.|+..++.|+| .. ++.|+||||+|.+++..+ .++++|||+|..... 
T Consensus       100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~-~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~  178 (601)
T KOG0590|consen  100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN-GVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK  178 (601)
T ss_pred             cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc-ccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence            99999999998873223225677778899999999999999 77 999999999999999999 999999999987665 


Q ss_pred             CC------CcCC-CccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccccc--CCCC
Q 018244          209 GR------SYST-NLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE--GQFS  278 (359)
Q Consensus       209 ~~------~~~~-t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~  278 (359)
                      ..      ...| ++.|+|||...+. ......|+||.|+++.-+++|..|........   .....+......  ....
T Consensus       179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~  255 (601)
T KOG0590|consen  179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD---GRYSSWKSNKGRFTQLPW  255 (601)
T ss_pred             CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc---ccceeecccccccccCcc
Confidence            21      3457 8999999999985 45668999999999999999997764332111   111111111101  1122


Q ss_pred             hHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          279 SDEGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                      ...+....+++.+++..+|+.|.+.+++-.
T Consensus       256 ~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  256 NSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             ccCChhhhhcccccccCCchhccccccccc
Confidence            345667889999999999999999998754

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.63  E-value=5.3e-16  Score=145.00  Aligned_cols=241  Identities=19%  Similarity=0.226  Sum_probs=183.6

Q ss_pred             cccccCCC--CCCcEEEEEEe---CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEE
Q 018244           60 NIVSEHGE--KAPNVVYKGKL---ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        60 ~~~~~lg~--G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv  131 (359)
                      .+.+.+|.  |.+|.||.+..   .++..+|+|.-+....  .....-.+|+.....++ |+|.++.+..+...+..++-
T Consensus       117 ~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiq  196 (524)
T KOG0601|consen  117 PISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQ  196 (524)
T ss_pred             ccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceee
Confidence            45667799  99999999986   3577899998543322  22333466788777774 99999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHH----HHHHhhcCCCcccccCCCCCeeeCCC-CCeEEeccCCcccC
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE----ALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNS  206 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~----~L~~LH~~~~ivH~Dikp~NIll~~~-~~~kl~DFg~a~~~  206 (359)
                      +|++. .+|.++... ....++...++.+..+..+    ||.++|+. +++|-|+||.||+...+ ...+++|||+...+
T Consensus       197 tE~~~-~sl~~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~-~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i  273 (524)
T KOG0601|consen  197 TELCG-ESLQSYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSN-NIVHDDLKPANIFTTSDWTSCKLTDFGLVSKI  273 (524)
T ss_pred             ecccc-chhHHhhhc-ccccCCchhhhhHHhhhhhcccccccccCCC-cccccccchhheecccccceeecCCcceeEEc
Confidence            99996 588888753 3344778888899999999    99999999 99999999999999988 88999999998876


Q ss_pred             CCCCC---------cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCC
Q 018244          207 RDGRS---------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF  277 (359)
Q Consensus       207 ~~~~~---------~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (359)
                      .....         ..+...|++||... +.++.+.|+||+|.++.+..++..++.......+.+..     .......+
T Consensus       274 ~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r-----~~~ip~e~  347 (524)
T KOG0601|consen  274 SDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR-----QGYIPLEF  347 (524)
T ss_pred             cCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc-----cccCchhh
Confidence            65431         13556799999987 66788999999999999999888766544222221111     11112223


Q ss_pred             ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      -...+.++...+.+|++.+|-.|++++.+.+.
T Consensus       348 ~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l  379 (524)
T KOG0601|consen  348 CEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL  379 (524)
T ss_pred             hcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence            33445567779999999999999999877653

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.61  E-value=2e-15  Score=142.70  Aligned_cols=140  Identities=17%  Similarity=0.130  Sum_probs=97.0

Q ss_pred             ccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHH----------------------------------------HHHH
Q 018244           63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDAR----------------------------------------QFLE  102 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~----------------------------------------~~~~  102 (359)
                      +.||.|++|.||+|++.+|+.||||+.+........                                        .+.+
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            357999999999999999999999998654211100                                        1334


Q ss_pred             HHHHHhcC----CCccccccccee-eeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHH-HHHHhhcCCC
Q 018244          103 EARAVGQL----RNRRLANLLGCC-CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE-ALEYCTSKER  176 (359)
Q Consensus       103 e~~~l~~l----~h~niv~~~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~-~L~~LH~~~~  176 (359)
                      |.+.+.++    ++.+-+.+-.++ ......+|||||++|++|.++... .....+   ...++..++. .+..+|.. |
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~-~~~~~~---~~~ia~~~~~~~l~ql~~~-g  277 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAAL-DEAGLD---RKALAENLARSFLNQVLRD-G  277 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHH-HhcCCC---HHHHHHHHHHHHHHHHHhC-C
Confidence            55544444    222223322222 223457899999999999887642 111222   3445666665 46788998 9


Q ss_pred             cccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       177 ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      ++|+|+||.||+++.++.++++|||++....
T Consensus       278 ~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       278 FFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence            9999999999999999999999999987654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.56  E-value=5.2e-15  Score=128.44  Aligned_cols=199  Identities=18%  Similarity=0.203  Sum_probs=141.5

Q ss_pred             HHHHHhcCCCcccccccceeeeCC-----cceEEEecCCCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcC-
Q 018244          103 EARAVGQLRNRRLANLLGCCCEGD-----ERLLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSK-  174 (359)
Q Consensus       103 e~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~-  174 (359)
                      -+..|-.+-|.|||+++.|+.+..     ...+++||+..|+|.++|++.  ....+......+|+.||+.||.|||+. 
T Consensus       117 vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~  196 (458)
T KOG1266|consen  117 VFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD  196 (458)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC
Confidence            345566667999999999997643     478999999999999999863  345677888899999999999999986 


Q ss_pred             CCcccccCCCCCeeeCCCCCeEEeccCCccc------C--CCCCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHH
Q 018244          175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------S--RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL  246 (359)
Q Consensus       175 ~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~------~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell  246 (359)
                      ..|+|+++..+.|++..+|-+|++--.....      .  .......+.++|.+||.-.....+.++|||+||+..++|.
T Consensus       197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema  276 (458)
T KOG1266|consen  197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA  276 (458)
T ss_pred             CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence            5689999999999999888888764221110      0  0111234567899999988777888999999999999998


Q ss_pred             hCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       247 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      -+..-..........+......+.        .-....-+.++..|++..|..||+|.+++-+
T Consensus       277 ilEiq~tnseS~~~~ee~ia~~i~--------~len~lqr~~i~kcl~~eP~~rp~ar~llfH  331 (458)
T KOG1266|consen  277 ILEIQSTNSESKVEVEENIANVII--------GLENGLQRGSITKCLEGEPNGRPDARLLLFH  331 (458)
T ss_pred             HheeccCCCcceeehhhhhhhhee--------eccCccccCcCcccccCCCCCCcchhhhhcC
Confidence            776322111111111111111110        0011223568999999999999999998765

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.54  E-value=8.1e-15  Score=140.25  Aligned_cols=144  Identities=15%  Similarity=0.100  Sum_probs=93.1

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCC-CcEEEEEEeCCCCCch----------------------------------HHH-
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWPD----------------------------------ARQ-   99 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~----------------------------------~~~-   99 (359)
                      |..+.. +.+|+|++|.||+|++.+ |+.||||+....-...                                  .+. 
T Consensus       119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l  197 (537)
T PRK04750        119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL  197 (537)
T ss_pred             HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence            455555 567999999999999876 9999999997542110                                  011 


Q ss_pred             -----HHHHHHHHhcCC----Ccccccccceeee-CCcceEEEecCCCCCHhhhhhcCCCC----CCCHHHHHHHHHHHH
Q 018244          100 -----FLEEARAVGQLR----NRRLANLLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQ----PMKWAMRLRVALHIA  165 (359)
Q Consensus       100 -----~~~e~~~l~~l~----h~niv~~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~----~l~~~~~~~i~~qi~  165 (359)
                           +.+|...+.++.    +.+.+.+-.++.+ ....+|||||++|+.+.+...-...+    .+....+..++.|+.
T Consensus       198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif  277 (537)
T PRK04750        198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF  277 (537)
T ss_pred             HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence                 233333333331    2333333333322 23567999999999998742111111    233444445555554


Q ss_pred             HHHHHhhcCCCcccccCCCCCeeeCCCC----CeEEeccCCcccCCC
Q 018244          166 EALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNSRD  208 (359)
Q Consensus       166 ~~L~~LH~~~~ivH~Dikp~NIll~~~~----~~kl~DFg~a~~~~~  208 (359)
                             .. |++|+|+||.||+++.++    .++++|||++...+.
T Consensus       278 -------~~-GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        278 -------RD-GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             -------hC-CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence                   45 999999999999999887    999999999876654

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.53  E-value=1.8e-13  Score=129.58  Aligned_cols=168  Identities=15%  Similarity=0.156  Sum_probs=133.8

Q ss_pred             EEE-EE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCHhhhhhcCCCC
Q 018244           73 VYK-GK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ  150 (359)
Q Consensus        73 Vy~-~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~  150 (359)
                      +|. |. ..++..|.|...+...........+-++-|+.++||||++++..+......|||+|-+.  -|..++.+    
T Consensus        27 ~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~----  100 (690)
T KOG1243|consen   27 LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE----  100 (690)
T ss_pred             cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH----
Confidence            443 43 55788899998887765445667888999999999999999999999999999999874  47777753    


Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCC----cCCCccccCcccccC
Q 018244          151 PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS----YSTNLAFTPPEYLRT  226 (359)
Q Consensus       151 ~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~----~~~t~~y~aPE~~~~  226 (359)
                       +........++||+.||.|||+..+++|++|.-+-|+++..|..||++|.++........    ...-..|..|+.+..
T Consensus       101 -l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~  179 (690)
T KOG1243|consen  101 -LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDP  179 (690)
T ss_pred             -hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCc
Confidence             346777888999999999999776999999999999999999999999998765443331    112235677766543


Q ss_pred             CCCCCccchhhHHHHHHHHHhCC
Q 018244          227 GRVTPESVMYSFGTLLLDLLSGK  249 (359)
Q Consensus       227 ~~~~~~~Di~slG~il~elltg~  249 (359)
                      ..  -..|.|.||+++++++.|.
T Consensus       180 s~--~s~D~~~Lg~li~el~ng~  200 (690)
T KOG1243|consen  180 SE--WSIDSWGLGCLIEELFNGS  200 (690)
T ss_pred             cc--cchhhhhHHHHHHHHhCcc
Confidence            32  4579999999999999993

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.51  E-value=9.4e-14  Score=114.86  Aligned_cols=128  Identities=15%  Similarity=0.073  Sum_probs=95.2

Q ss_pred             cccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccc-cccceeeeCCcceEEEecCCCCCH
Q 018244           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLA-NLLGCCCEGDERLLVAEYMPNDTL  140 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~~~gsL  140 (359)
                      ++.++.|.++.||++... +..+++|....... ....+.+|+.++..+.+.+++ +++.+  .....++||||++|.++
T Consensus         3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~~l   78 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGSEL   78 (170)
T ss_pred             eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCCcc
Confidence            345688999999999875 66899999865432 123457889999988655544 44433  23456899999999877


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-----cccccCCCCCeeeCCCCCeEEeccCCccc
Q 018244          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER-----ALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (359)
Q Consensus       141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~-----ivH~Dikp~NIll~~~~~~kl~DFg~a~~  205 (359)
                      ....       .   ....++.+++.+|+.||+. +     ++|+|++|+||+++ ++.++++|||.+..
T Consensus        79 ~~~~-------~---~~~~~~~~l~~~l~~LH~~-~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          79 LTED-------F---SDPENLEKIAKLLKKLHSS-PLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             cccc-------c---cCHHHHHHHHHHHHHHhCC-CCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            5431       1   1134568999999999998 6     49999999999999 67899999998753

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.48  E-value=6.1e-14  Score=131.29  Aligned_cols=244  Identities=16%  Similarity=0.101  Sum_probs=180.0

Q ss_pred             CcccccccCCCCCCcEEEEEEe--CCCcEEEEEEeCCCCCchHHH--HHHHHHHHhcC-CCcccccccceeeeCCcceEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSAWPDARQ--FLEEARAVGQL-RNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~--~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv  131 (359)
                      .++..+..||.|.|+.|++...  .++..+++|.+.........+  -..|+.+...+ .|.++++....|......+|=
T Consensus       265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip  344 (524)
T KOG0601|consen  265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIP  344 (524)
T ss_pred             CCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCc
Confidence            4566788889999999999874  367889999887664443333  35677777777 499999998888888888899


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC-CCeEEeccCCcccCCCCC
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~-~~~kl~DFg~a~~~~~~~  210 (359)
                      -|||.++++...+.  -...+++..++++..|++.++.++|+. .++|+|+||+||++..+ +..+++|||.+....-..
T Consensus       345 ~e~~~~~s~~l~~~--~~~~~d~~~~~~~~~q~~~~l~~i~s~-~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~  421 (524)
T KOG0601|consen  345 LEFCEGGSSSLRSV--TSQMLDEDPRLRLTAQILTALNVIHSK-LFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSS  421 (524)
T ss_pred             hhhhcCcchhhhhH--HHHhcCcchhhhhHHHHHhccccccch-hhhcccccccceeeccchhhhhccccccccccceec
Confidence            99999988876653  456688889999999999999999999 99999999999999876 889999999986533222


Q ss_pred             -CcCCCcccc--CcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          211 -SYSTNLAFT--PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       211 -~~~~t~~y~--aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                       ....+-++.  +++......+..++|++|||..+.+..++........ ..      ..+ ........ ......+..
T Consensus       422 ~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~-~~------~~i-~~~~~p~~-~~~~~~~q~  492 (524)
T KOG0601|consen  422 GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV-QS------LTI-RSGDTPNL-PGLKLQLQV  492 (524)
T ss_pred             ccccccccccccchhhccccccccccccccccccccccccCcccCcccc-cc------eee-ecccccCC-CchHHhhhh
Confidence             222233344  4555555668889999999999999999885433211 10      001 11111111 222377888


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVTALVT  312 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~L~~  312 (359)
                      +...+...++..||.+.++..+.+.
T Consensus       493 ~~kv~~~~~~~~~~l~~~l~~~~~~  517 (524)
T KOG0601|consen  493 LLKVMINPDRKRRPSAVELSLHSEF  517 (524)
T ss_pred             hhhhhcCCccccchhhhhhcccchh
Confidence            9999999999999999987765443

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.40  E-value=2.9e-12  Score=107.04  Aligned_cols=136  Identities=10%  Similarity=0.115  Sum_probs=98.1

Q ss_pred             ccCCCCCCcEEEEEEeCC-------CcEEEEEEeCCCCC----------------------chHHH----HHHHHHHHhc
Q 018244           63 SEHGEKAPNVVYKGKLEN-------QFRIAVKRFNRSAW----------------------PDARQ----FLEEARAVGQ  109 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~----------------------~~~~~----~~~e~~~l~~  109 (359)
                      +.||.|--+.||.|...+       +..+|||+......                      ...+.    ..+|++.|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            457899999999998442       47899998752110                      01112    2379999999


Q ss_pred             CCC--cccccccceeeeCCcceEEEecCCCCCHhh-hhhcCCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCcccccCCCC
Q 018244          110 LRN--RRLANLLGCCCEGDERLLVAEYMPNDTLAK-HLFHWETQPMKWAMRLRVALHIAEALEYC-TSKERALYHDLNAY  185 (359)
Q Consensus       110 l~h--~niv~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~qi~~~L~~L-H~~~~ivH~Dikp~  185 (359)
                      +..  -++.+.+++    ..-+|||||+.++.+.. .+   +...++......+..+++.+|..| |.. |++|+||++.
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~L---kd~~~~~~~~~~i~~~i~~~l~~l~H~~-glVHGDLs~~  154 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKL---KDAKLNDEEMKNAYYQVLSMMKQLYKEC-NLVHADLSEY  154 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhh---hccccCHHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHH
Confidence            854  355555543    46789999997653422 23   223455566778889999999999 787 9999999999


Q ss_pred             CeeeCCCCCeEEeccCCcccCC
Q 018244          186 RIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       186 NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      ||+++ ++.+.|+|||.+-..+
T Consensus       155 NIL~~-~~~v~iIDF~qav~~~  175 (197)
T cd05146         155 NMLWH-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             HEEEE-CCcEEEEECCCceeCC
Confidence            99997 4689999999876543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.40  E-value=1.6e-13  Score=135.32  Aligned_cols=242  Identities=15%  Similarity=0.118  Sum_probs=178.0

Q ss_pred             CcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ....+++-+-+|+++.++.+. -..|...+.|+.....   ..+.+....+-.++-...+|.++....-+......+|++
T Consensus       804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~  883 (1205)
T KOG0606|consen  804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVG  883 (1205)
T ss_pred             ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhh
Confidence            344556666889999999887 3345455555544322   112333444444554456677777776666677899999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC-----
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR-----  207 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~-----  207 (359)
                      +|..+++|...++  .....+.......+..+.++++|||.. .+.|+|++|.|++...++..+++|||......     
T Consensus       884 ~~~~~~~~~Skl~--~~~~~saepaRs~i~~~vqs~e~L~s~-~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~  960 (1205)
T KOG0606|consen  884 HYLNGGDLPSKLH--NSGCLSAEPARSPILERVQSLESLHSS-LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT  960 (1205)
T ss_pred             HHhccCCchhhhh--cCCCcccccccchhHHHHhhhhccccc-hhhcccccccchhhcccCCcccCccccccccccccCc
Confidence            9999999999886  444677777778888999999999998 79999999999999999999999998422110     


Q ss_pred             -------------------------C-----CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchh
Q 018244          208 -------------------------D-----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL  257 (359)
Q Consensus       208 -------------------------~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~  257 (359)
                                               .     .....+|+.|.+||...+......+|+|++|++++|.++|..||....-
T Consensus       961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tp 1040 (1205)
T KOG0606|consen  961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETP 1040 (1205)
T ss_pred             CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcch
Confidence                                     0     0123468899999999999999999999999999999999999877655


Q ss_pred             HHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHH
Q 018244          258 DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR  304 (359)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~  304 (359)
                      ....+........   ...-+...+..+.+++...+..+|.+|..+.
T Consensus      1041 q~~f~ni~~~~~~---~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1041 QQIFENILNRDIP---WPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             hhhhhccccCCCC---CCCCccccChhhhhhhhhhhccCchhccCcc
Confidence            4444333322221   1223455678899999999999999998776

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.37  E-value=2e-11  Score=112.58  Aligned_cols=215  Identities=17%  Similarity=0.166  Sum_probs=155.6

Q ss_pred             CCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeee----CCcceEEEecCCC-CCHhh
Q 018244           69 APNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLVAEYMPN-DTLAK  142 (359)
Q Consensus        69 ~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~-gsL~~  142 (359)
                      -..+.|++. .-+|..+++|+++............-++.++++.|.|+|++.++|..    +..+++||+|.++ ++|.+
T Consensus       288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d  367 (655)
T KOG3741|consen  288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD  367 (655)
T ss_pred             ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence            346789998 56899999999954433333344556889999999999999998874    3468999999876 57766


Q ss_pred             hhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          143 HLFHW-------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       143 ~l~~~-------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +-...             .+...++..+|.++.|+..||.+||+. |+.-+-|.|.+||++.+.+++|+..|+......+
T Consensus       368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss-GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d  446 (655)
T KOG3741|consen  368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS-GLACKTLDLKKILVTGKMRIRISGCGIMDVLQED  446 (655)
T ss_pred             HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc-CceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence            54322             123467899999999999999999999 9988999999999999999999998887655444


Q ss_pred             CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ..          |-+.   -..+-|.=.||.+++-|.||..--.  ..+.......         .......+.++++++
T Consensus       447 ~~----------~~le---~~Qq~D~~~lG~ll~aLAt~~~ns~--~~d~~~~s~~---------~~I~~~yS~D~rn~v  502 (655)
T KOG3741|consen  447 PT----------EPLE---SQQQNDLRDLGLLLLALATGTENSN--RTDSTQSSHL---------TRITTTYSTDLRNVV  502 (655)
T ss_pred             CC----------cchh---HHhhhhHHHHHHHHHHHhhcccccc--cccchHHHHH---------HHhhhhhhHHHHHHH
Confidence            31          1111   1234688899999999999963210  0010110000         112355677899999


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 018244          290 SRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~  309 (359)
                      ......++++ -++.+++.+
T Consensus       503 ~yl~s~~~~~-ksI~~llp~  521 (655)
T KOG3741|consen  503 EYLESLNFRE-KSIQDLLPM  521 (655)
T ss_pred             HHHHhcCccc-ccHHHHHHH
Confidence            9999999987 677777765

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.37  E-value=6.3e-12  Score=108.49  Aligned_cols=140  Identities=17%  Similarity=0.180  Sum_probs=107.9

Q ss_pred             ccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCc--ccccccceeeeC---CcceEEEecCC
Q 018244           63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNR--RLANLLGCCCEG---DERLLVAEYMP  136 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~~---~~~~lv~e~~~  136 (359)
                      +.+|.|..+.||+++..+|..+++|....... .....+.+|+++++.+.+.  ++.+++.+....   +..++||||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            34689999999999987767899999865432 1345678899999999753  456677766553   25689999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC------------------------------------------
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK------------------------------------------  174 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~------------------------------------------  174 (359)
                      |.++.+.+.   ...++......++.+++.+|..||+.                                          
T Consensus        84 G~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (223)
T cd05154          84 GRVLRDRLL---RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL  160 (223)
T ss_pred             CEecCCCCC---CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence            988877652   13567777888888888888888841                                          


Q ss_pred             -------------CCcccccCCCCCeeeCC--CCCeEEeccCCccc
Q 018244          175 -------------ERALYHDLNAYRIVFDD--DVNPRLSCFGLMKN  205 (359)
Q Consensus       175 -------------~~ivH~Dikp~NIll~~--~~~~kl~DFg~a~~  205 (359)
                                   ..++|+|++|.||+++.  ++.+.|+||+.+..
T Consensus       161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                         24589999999999998  56689999998764

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.35  E-value=1.4e-11  Score=99.22  Aligned_cols=144  Identities=16%  Similarity=0.123  Sum_probs=108.3

Q ss_pred             ccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc--------hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      .+..+-+|+-+.|+++.+. |+...||.-......        ...+..+|+++|.++.--.|.-..-++.+...-.|+|
T Consensus        11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M   89 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM   89 (229)
T ss_pred             cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence            3445578999999999985 445566654322111        1345678999999987667766666777888889999


Q ss_pred             ecCCC-CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC---CeEEeccCCcccC
Q 018244          133 EYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFGLMKNS  206 (359)
Q Consensus       133 e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~---~~kl~DFg~a~~~  206 (359)
                      ||++| -++.+++...............++..|-..+.-||.+ +++|+||..+||++..++   .+.++|||++...
T Consensus        90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n-diiHGDLTTSNill~~~~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen   90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN-DIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS  166 (229)
T ss_pred             EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC-CeecccccccceEEecCCCcCceEEEeecchhcc
Confidence            99977 4788888764444444555578999999999999999 999999999999996544   3689999997643

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.34  E-value=1.5e-11  Score=99.48  Aligned_cols=131  Identities=18%  Similarity=0.194  Sum_probs=100.4

Q ss_pred             cCCCCCCcEEEEEEeCCCcEEEEEEeCCCCC--ch------HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PD------ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .+++|+-+.+|.+.+-+. .+.+|.-.....  +.      ...-.+|+.++.+++--.|.-..=+..+++...|+|||+
T Consensus         3 ~i~~GAEa~i~~~~~~g~-~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I   81 (204)
T COG3642           3 LIKQGAEAIIYLTDFLGL-PAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI   81 (204)
T ss_pred             hhhCCcceeEEeeeccCc-ceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence            358899999999976443 466665433221  11      234567999999987666666666777888999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      +|..|.+++...         ...++..+-.-+.-||.. ||+|+||.++||++.++. +.++|||++...
T Consensus        82 ~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~-givHGDLTtsNiIl~~~~-i~~IDfGLg~~s  141 (204)
T COG3642          82 EGELLKDALEEA---------RPDLLREVGRLVGKLHKA-GIVHGDLTTSNIILSGGR-IYFIDFGLGEFS  141 (204)
T ss_pred             CChhHHHHHHhc---------chHHHHHHHHHHHHHHhc-CeecCCCccceEEEeCCc-EEEEECCccccc
Confidence            999888888532         256777888888899999 999999999999998654 999999998643

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.21  E-value=1.9e-10  Score=101.44  Aligned_cols=132  Identities=11%  Similarity=0.091  Sum_probs=97.9

Q ss_pred             EEEEEEeCCCcEEEEEEeCCCCCch-H----------HHHHHHHHHHhcCCCccccc--ccceeee-----CCcceEEEe
Q 018244           72 VVYKGKLENQFRIAVKRFNRSAWPD-A----------RQFLEEARAVGQLRNRRLAN--LLGCCCE-----GDERLLVAE  133 (359)
Q Consensus        72 ~Vy~~~~~~~~~vavK~~~~~~~~~-~----------~~~~~e~~~l~~l~h~niv~--~~~~~~~-----~~~~~lv~e  133 (359)
                      .|++..+ +|+.+.||......... .          ..+.+|...+..|..-+|..  .+++...     ....+||||
T Consensus        37 rvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte  115 (268)
T PRK15123         37 RTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE  115 (268)
T ss_pred             eEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence            3667766 56689999875444221 1          13778999998886544433  3455543     234689999


Q ss_pred             cCCCC-CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC-------CCCeEEeccCCccc
Q 018244          134 YMPND-TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-------DVNPRLSCFGLMKN  205 (359)
Q Consensus       134 ~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~-------~~~~kl~DFg~a~~  205 (359)
                      ++++. +|.+++........+......++.+++..+.-||.. |++|+|++++|||++.       +..+.|+||+.+..
T Consensus       116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~-Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA-GINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC-cCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            99875 799888543344566777889999999999999999 9999999999999975       46799999998753

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.16  E-value=1.6e-10  Score=96.20  Aligned_cols=126  Identities=19%  Similarity=0.174  Sum_probs=82.4

Q ss_pred             EEEEEEeCCCcEEEEEEeCCCCCc----------------------h----HHHHHHHHHHHhcCCCc--ccccccceee
Q 018244           72 VVYKGKLENQFRIAVKRFNRSAWP----------------------D----ARQFLEEARAVGQLRNR--RLANLLGCCC  123 (359)
Q Consensus        72 ~Vy~~~~~~~~~vavK~~~~~~~~----------------------~----~~~~~~e~~~l~~l~h~--niv~~~~~~~  123 (359)
                      .||.|...+|..+|||........                      .    .....+|.+.|.++..-  ++.+.+++. 
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-   79 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence            389999888999999987532100                      0    12356799999999765  455555442 


Q ss_pred             eCCcceEEEecCC--CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCcccccCCCCCeeeCCCCCeEEecc
Q 018244          124 EGDERLLVAEYMP--NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC-TSKERALYHDLNAYRIVFDDDVNPRLSCF  200 (359)
Q Consensus       124 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L-H~~~~ivH~Dikp~NIll~~~~~~kl~DF  200 (359)
                         .-.|||||++  |..+.. +..   ..++......++.+++..+..+ |.. |++|+|+.+.||+++++ .+.++||
T Consensus        80 ---~~~ivME~I~~~G~~~~~-l~~---~~~~~~~~~~~~~~il~~~~~~~~~~-givHGDLs~~NIlv~~~-~~~iIDf  150 (188)
T PF01163_consen   80 ---RNVIVMEYIGEDGVPLPR-LKD---VDLSPEEPKELLEEILEEIIKMLHKA-GIVHGDLSEYNILVDDG-KVYIIDF  150 (188)
T ss_dssp             ---TTEEEEE--EETTEEGGC-HHH---CGGGGSTHHHHHHHHHHHHHHHHHCT-TEEESS-STTSEEEETT-CEEE--G
T ss_pred             ---CCEEEEEecCCCccchhh-HHh---ccccchhHHHHHHHHHHHHHHHHHhc-CceecCCChhhEEeecc-eEEEEec
Confidence               4579999998  544433 322   1122344566777888866664 677 99999999999999977 9999999


Q ss_pred             CCcccCC
Q 018244          201 GLMKNSR  207 (359)
Q Consensus       201 g~a~~~~  207 (359)
                      |.+....
T Consensus       151 ~qav~~~  157 (188)
T PF01163_consen  151 GQAVDSS  157 (188)
T ss_dssp             TTEEETT
T ss_pred             CcceecC
Confidence            9876554

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=99.15  E-value=2.4e-09  Score=96.76  Aligned_cols=247  Identities=17%  Similarity=0.186  Sum_probs=154.9

Q ss_pred             ccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-CCcccccccce------e-eeCCcceEEEe
Q 018244           63 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGC------C-CEGDERLLVAE  133 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~------~-~~~~~~~lv~e  133 (359)
                      ..||+|+-+.+|-.- ..+  .|| |++.........+   -+..|... .||-+-.-+.+      . ......-++|.
T Consensus        17 r~LgqGgea~ly~l~e~~d--~VA-KIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP   90 (637)
T COG4248          17 RPLGQGGEADLYTLGEVRD--QVA-KIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMP   90 (637)
T ss_pred             ccccCCccceeeecchhhc--hhh-eeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecc
Confidence            357999999999654 322  244 7776554332222   23334443 35533221111      0 11122567777


Q ss_pred             cCCCCC-Hhhhhh----cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          134 YMPNDT-LAKHLF----HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       134 ~~~~gs-L~~~l~----~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      .+.+.. ...+..    +..-....|+...+.++.++.+.+-||.. |.+-+|+.++|+|+.+++.+.|.|-.....-..
T Consensus        91 ~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~-Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~n  169 (637)
T COG4248          91 KVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH-GHVVGDVNQNSFLVSDDSKVVLVDSDSFQINAN  169 (637)
T ss_pred             cCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc-CCcccccCccceeeecCceEEEEcccceeeccC
Confidence            776642 222221    11223568999999999999999999999 999999999999999999999999665444333


Q ss_pred             CC---CcCCCccccCccccc-----CCCCCCccchhhHHHHHHHHHhC-CCCCCcchh--------H-HHhhhhhhhhcc
Q 018244          209 GR---SYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSG-KHIPPSHAL--------D-LIRDRNIQTLTD  270 (359)
Q Consensus       209 ~~---~~~~t~~y~aPE~~~-----~~~~~~~~Di~slG~il~elltg-~~p~~~~~~--------~-~~~~~~~~~~~~  270 (359)
                      +.   ..+|...|++||.-.     +-.-+...|.|.||+++++++.| ++||.+-..        + .+....+..-.+
T Consensus       170 g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~  249 (637)
T COG4248         170 GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASD  249 (637)
T ss_pred             CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechh
Confidence            33   346778999999755     33456789999999999999887 777653211        0 111111111111


Q ss_pred             ccc-----cCCCC-hHHHHHHHHHHHHhcccC--CCCCCCHHHHHHHHHHhhhc
Q 018244          271 SCL-----EGQFS-SDEGTELVRLASRCLQYE--PRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       271 ~~~-----~~~~~-~~~~~~l~~li~~cl~~d--p~~Rps~~~il~~L~~~~~~  316 (359)
                      ...     ...++ .-.++++..|..+|+..-  +.-|||++..+..|..+.+.
T Consensus       250 ~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~  303 (637)
T COG4248         250 QRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQ  303 (637)
T ss_pred             ccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHh
Confidence            000     00111 225678899999999753  56899999998888777654

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.07  E-value=4.1e-11  Score=114.21  Aligned_cols=144  Identities=21%  Similarity=0.293  Sum_probs=104.6

Q ss_pred             HHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCC-------------cCCCccccCcccccCCCC
Q 018244          163 HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-------------YSTNLAFTPPEYLRTGRV  229 (359)
Q Consensus       163 qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~-------------~~~t~~y~aPE~~~~~~~  229 (359)
                      +++.||.|+|+..++||++|.|++|.++.++.+||+.|+++-.......             ......|.|||++.....
T Consensus       107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~  186 (700)
T KOG2137|consen  107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTN  186 (700)
T ss_pred             cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccccc
Confidence            4449999999998999999999999999999999999998765443211             122467999999998888


Q ss_pred             CCccchhhHHHHHHHHHhC-CCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          230 TPESVMYSFGTLLLDLLSG-KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       230 ~~~~Di~slG~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                      +.++|+||+|+++|.+..| +..+.........  .............+....+.++++=+.+++..++..||++..+..
T Consensus       187 ~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~--~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~  264 (700)
T KOG2137|consen  187 TPASDVFSLGVLIYTIYNGGKSIIAANGGLLSY--SFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLS  264 (700)
T ss_pred             cccccceeeeeEEEEEecCCcchhhccCCcchh--hhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhc
Confidence            9999999999999999844 4333222111111  111111111122234667789999999999999999997777654

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.96  E-value=1.6e-08  Score=87.02  Aligned_cols=147  Identities=15%  Similarity=0.098  Sum_probs=101.5

Q ss_pred             HHHHHhcCCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc----------------------hHHHHHHHHH
Q 018244           48 TLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP----------------------DARQFLEEAR  105 (359)
Q Consensus        48 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~e~~  105 (359)
                      .|....+.-.-+.+-..||-|--+.||.|..+.|..+|||.-......                      ......+|.+
T Consensus        82 AL~~l~~r~~ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~  161 (304)
T COG0478          82 ALHALVKRGIVEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFE  161 (304)
T ss_pred             HHHHHHHcChHHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHH
Confidence            333333333344555678999999999999999999999975321100                      1234678999


Q ss_pred             HHhcCCCc--ccccccceeeeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCC
Q 018244          106 AVGQLRNR--RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN  183 (359)
Q Consensus       106 ~l~~l~h~--niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dik  183 (359)
                      +|..|.-.  .+.+.+++-    .-.+||||++|-.|...-       ++......++..|+.-+.-+-.. |+||+|+.
T Consensus       162 ~L~~L~~~G~~VP~P~~~n----RHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~-GiVHGDlS  229 (304)
T COG0478         162 ALQRLYPEGVKVPKPIAWN----RHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRR-GIVHGDLS  229 (304)
T ss_pred             HHHHhhhcCCCCCCccccc----cceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHc-CccccCCc
Confidence            99999755  677776643    568999999886554322       12333334444555555444455 99999999


Q ss_pred             CCCeeeCCCCCeEEeccCCcccC
Q 018244          184 AYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       184 p~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      +=||+++++|.+.++||-.+...
T Consensus       230 efNIlV~~dg~~~vIDwPQ~v~~  252 (304)
T COG0478         230 EFNILVTEDGDIVVIDWPQAVPI  252 (304)
T ss_pred             hheEEEecCCCEEEEeCcccccC
Confidence            99999999999999999876543

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.88  E-value=1e-08  Score=98.01  Aligned_cols=141  Identities=13%  Similarity=0.061  Sum_probs=90.5

Q ss_pred             cCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchH------------------------------H----------HHHHH
Q 018244           64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA------------------------------R----------QFLEE  103 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~------------------------------~----------~~~~e  103 (359)
                      -++.++-|.||+|++++|+.||||+....-....                              +          .+.+|
T Consensus       132 PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~E  211 (517)
T COG0661         132 PIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRRE  211 (517)
T ss_pred             chhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHHH
Confidence            4588999999999999999999999864321100                              0          13345


Q ss_pred             HHHHhcCC----Cccccccccee-eeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHH-HHhhcCCCc
Q 018244          104 ARAVGQLR----NRRLANLLGCC-CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEAL-EYCTSKERA  177 (359)
Q Consensus       104 ~~~l~~l~----h~niv~~~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L-~~LH~~~~i  177 (359)
                      ...+.+++    ...-+++-.++ .......|+|||++|-.+.+...- +....+...+.   ..++.+. ..+-.. |+
T Consensus       212 A~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l-~~~g~d~k~ia---~~~~~~f~~q~~~d-gf  286 (517)
T COG0661         212 AANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAAL-KSAGIDRKELA---ELLVRAFLRQLLRD-GF  286 (517)
T ss_pred             HHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHH-HhcCCCHHHHH---HHHHHHHHHHHHhc-Cc
Confidence            54444442    12222222222 234567899999999888887432 23445533332   2222222 222234 99


Q ss_pred             ccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          178 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       178 vH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +|.|.+|.||+++.+|.+.+.|||+....++.
T Consensus       287 fHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~  318 (517)
T COG0661         287 FHADPHPGNILVRSDGRIVLLDFGIVGRLDPK  318 (517)
T ss_pred             cccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence            99999999999999999999999998766543

>PRK09902 hypothetical protein; Provisional

Probab=98.87  E-value=4.8e-08  Score=82.06  Aligned_cols=137  Identities=13%  Similarity=0.054  Sum_probs=101.3

Q ss_pred             CCCCCcEEEEEEeCCCcEEEEEEeCCCC------CchHHHHHHHHHHHhcCCCcc--cccccceee-eC----CcceEEE
Q 018244           66 GEKAPNVVYKGKLENQFRIAVKRFNRSA------WPDARQFLEEARAVGQLRNRR--LANLLGCCC-EG----DERLLVA  132 (359)
Q Consensus        66 g~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~-~~----~~~~lv~  132 (359)
                      |.||.+-|+.....+. .+=+|+-....      ......|.+|+..|..|..-+  +.+.. ++. ..    -..+||+
T Consensus        27 ~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT  104 (216)
T PRK09902         27 RRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT  104 (216)
T ss_pred             CCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence            6788888999876544 57777664221      113457899999999996433  44444 332 11    2368999


Q ss_pred             ecCCC-CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCC--eEEeccCCccc
Q 018244          133 EYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--PRLSCFGLMKN  205 (359)
Q Consensus       133 e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~--~kl~DFg~a~~  205 (359)
                      |-+.+ -+|.+++.+..-...+......++.+++..++-||+. |+.|+|+.+.||+++.++.  ++++||.-++.
T Consensus       105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~-Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV-NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            97753 5888888654444668888899999999999999999 9999999999999986667  99999986653

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.85  E-value=1.5e-08  Score=86.52  Aligned_cols=106  Identities=19%  Similarity=0.202  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHhcCCCcc--cccccceeeeCC----cceEEEecCCCC-CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 018244           98 RQFLEEARAVGQLRNRR--LANLLGCCCEGD----ERLLVAEYMPND-TLAKHLFHWETQPMKWAMRLRVALHIAEALEY  170 (359)
Q Consensus        98 ~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~----~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~  170 (359)
                      ....+|...+..|..-+  .++.+++.....    ..+||+|++++. +|.+++...  ..++......++.+++..++-
T Consensus        56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~--~~~~~~~~~~ll~~l~~~i~~  133 (206)
T PF06293_consen   56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQW--EQLDPSQRRELLRALARLIAK  133 (206)
T ss_pred             hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhh--cccchhhHHHHHHHHHHHHHH
Confidence            35678888888875443  445555555432    348999999874 799988632  226777788999999999999


Q ss_pred             hhcCCCcccccCCCCCeeeCCCC---CeEEeccCCcccC
Q 018244          171 CTSKERALYHDLNAYRIVFDDDV---NPRLSCFGLMKNS  206 (359)
Q Consensus       171 LH~~~~ivH~Dikp~NIll~~~~---~~kl~DFg~a~~~  206 (359)
                      ||.. |++|+|+++.|||++.++   .+.++||+-++..
T Consensus       134 lH~~-gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  134 LHDA-GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             HHHC-cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            9999 999999999999999877   8999999977653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.83  E-value=7.4e-08  Score=82.10  Aligned_cols=160  Identities=20%  Similarity=0.202  Sum_probs=113.2

Q ss_pred             cccccCHHHHHHHhcCCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCch-------------------HH--
Q 018244           40 VFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD-------------------AR--   98 (359)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-------------------~~--   98 (359)
                      .+...+...+....+......+.+.|+.|--+.||+|...++..+|+|++.......                   ..  
T Consensus        31 v~D~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~l  110 (268)
T COG1718          31 VFDKRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKL  110 (268)
T ss_pred             hhhhHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHH
Confidence            345566777777777777777778889999999999998888899999986432111                   11  


Q ss_pred             ---HHHHHHHHHhcCC--CcccccccceeeeCCcceEEEecCCCC-CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 018244           99 ---QFLEEARAVGQLR--NRRLANLLGCCCEGDERLLVAEYMPND-TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT  172 (359)
Q Consensus        99 ---~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH  172 (359)
                         -..+|+..|+++.  +-.+.+-+++.    .-.|||||+... .-.-.|   +.-.+.......+..++++.+.-|-
T Consensus       111 v~~W~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~L---kDv~~e~~e~~~~~~~~v~~~~~l~  183 (268)
T COG1718         111 VFAWARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRL---KDVPLELEEAEGLYEDVVEYMRRLY  183 (268)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCc---ccCCcCchhHHHHHHHHHHHHHHHH
Confidence               1345777777774  33444444443    457999998653 111122   2223344467778888888888887


Q ss_pred             cCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          173 SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       173 ~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      ...++||+||..=|||+. ++.+.++|||.|-...
T Consensus       184 ~~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~  217 (268)
T COG1718         184 KEAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTID  217 (268)
T ss_pred             HhcCcccccchhhheEEE-CCeEEEEECccccccC
Confidence            744999999999999999 8899999999876544

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.61  E-value=5.1e-07  Score=76.20  Aligned_cols=134  Identities=13%  Similarity=0.079  Sum_probs=84.0

Q ss_pred             ccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHH---------HHHHHHHHHhcCCCc---ccccccceeee--
Q 018244           59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDAR---------QFLEEARAVGQLRNR---RLANLLGCCCE--  124 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~---------~~~~e~~~l~~l~h~---niv~~~~~~~~--  124 (359)
                      |..++.+-......|.+-.. +|..+.+|..........+         .+.+.+..+..++..   ..+.++.+...  
T Consensus        33 ~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~  111 (229)
T PF06176_consen   33 YKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKI  111 (229)
T ss_pred             ceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeeee
Confidence            33444445555555666655 4567999988754322111         123444444444332   22332222221  


Q ss_pred             ---CCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccC
Q 018244          125 ---GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG  201 (359)
Q Consensus       125 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg  201 (359)
                         ....+++|||++|..|.+...      +++    .+...+.+++.-||.. |++|+|.+|.|++++++ .++++||+
T Consensus       112 ~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~-G~~HGD~hpgNFlv~~~-~i~iID~~  179 (229)
T PF06176_consen  112 FRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKH-GFYHGDPHPGNFLVSNN-GIRIIDTQ  179 (229)
T ss_pred             ccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHc-CCccCCCCcCcEEEECC-cEEEEECc
Confidence               234568999999988876542      333    2446677889999999 99999999999999855 59999998


Q ss_pred             Cccc
Q 018244          202 LMKN  205 (359)
Q Consensus       202 ~a~~  205 (359)
                      ..+.
T Consensus       180 ~k~~  183 (229)
T PF06176_consen  180 GKRM  183 (229)
T ss_pred             cccc
Confidence            7653

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.60  E-value=6.2e-07  Score=77.54  Aligned_cols=136  Identities=12%  Similarity=0.101  Sum_probs=82.6

Q ss_pred             cCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcc--cccccceeeeCCcceEEEecCCCCC-H
Q 018244           64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANLLGCCCEGDERLLVAEYMPNDT-L  140 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~gs-L  140 (359)
                      .+|.|..+.||+..   +..+++|......  ......+|.++++.+..-+  +.+.+++....+...+|||+++|.+ +
T Consensus         8 ~i~~G~t~~~y~~~---~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~   82 (226)
T TIGR02172         8 QTGEGGNGESYTHK---TGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF   82 (226)
T ss_pred             eecCCCCcceeEec---CCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence            45999999999842   3357788876533  2345788999999986433  4667777777777889999998863 2


Q ss_pred             hhhhh---------------------cCCCCCCCHHHH-HHHHH----------HHHHH-HHHhh---cCCCcccccCCC
Q 018244          141 AKHLF---------------------HWETQPMKWAMR-LRVAL----------HIAEA-LEYCT---SKERALYHDLNA  184 (359)
Q Consensus       141 ~~~l~---------------------~~~~~~l~~~~~-~~i~~----------qi~~~-L~~LH---~~~~ivH~Dikp  184 (359)
                      ...+.                     ............ ..+..          .+... ..+|.   ....++|+|+.|
T Consensus        83 ~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~  162 (226)
T TIGR02172        83 SRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQI  162 (226)
T ss_pred             hhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCC
Confidence            11110                     000001111110 00100          01111 12222   123568999999


Q ss_pred             CCeeeCCCCCeEEeccCCccc
Q 018244          185 YRIVFDDDVNPRLSCFGLMKN  205 (359)
Q Consensus       185 ~NIll~~~~~~kl~DFg~a~~  205 (359)
                      .||++++++ +.++||+.+..
T Consensus       163 ~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       163 GNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             CcEEEcCCC-cEEEechhcCc
Confidence            999999888 99999998653

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.56  E-value=5.4e-07  Score=86.04  Aligned_cols=138  Identities=17%  Similarity=0.102  Sum_probs=87.3

Q ss_pred             cCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCch-------------------------------HH------HHHHHHHH
Q 018244           64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD-------------------------------AR------QFLEEARA  106 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-------------------------------~~------~~~~e~~~  106 (359)
                      .||..+.|.||+|++++|+.||||+-+..-...                               .+      .|.+|.+.
T Consensus       168 piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~N  247 (538)
T KOG1235|consen  168 PIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKN  247 (538)
T ss_pred             hhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHHh
Confidence            468899999999999999999999866432111                               00      12334433


Q ss_pred             Hhc----CCCcc------cccccceeeeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHh-hcCC
Q 018244          107 VGQ----LRNRR------LANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC-TSKE  175 (359)
Q Consensus       107 l~~----l~h~n------iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L-H~~~  175 (359)
                      ..+    ++|-+      |.+++-.+  .....|+|||++|..+.+.-.- ....++...+..   .+.++...+ =.. 
T Consensus       248 ae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i-~~~gi~~~~i~~---~l~~~~~~qIf~~-  320 (538)
T KOG1235|consen  248 AERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAI-DKRGISPHDILN---KLVEAYLEQIFKT-  320 (538)
T ss_pred             HHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHH-HHcCCCHHHHHH---HHHHHHHHHHHhc-
Confidence            322    23444      33333222  2357899999999877665322 444555554333   333332221 223 


Q ss_pred             CcccccCCCCCeeeC----CCCCeEEeccCCcccCCC
Q 018244          176 RALYHDLNAYRIVFD----DDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       176 ~ivH~Dikp~NIll~----~~~~~kl~DFg~a~~~~~  208 (359)
                      |.+|+|-+|.||++.    .++.+.+-|||+......
T Consensus       321 GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  321 GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             CCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            899999999999998    367899999999775543

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.52  E-value=1.2e-06  Score=73.33  Aligned_cols=100  Identities=23%  Similarity=0.281  Sum_probs=79.2

Q ss_pred             HHHHHHHhcCCC-cccccccceeeeCCcceEEEecCCCCCHhhh---hhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC--
Q 018244          101 LEEARAVGQLRN-RRLANLLGCCCEGDERLLVAEYMPNDTLAKH---LFHWETQPMKWAMRLRVALHIAEALEYCTSK--  174 (359)
Q Consensus       101 ~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~---l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--  174 (359)
                      ..|.-+|+.+++ +++++++|+|    ..+++.||...+++...   +.  .-...+|..+.+|+.+++..+.++++.  
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~C----G~~~v~E~~~~~~~~~~~~~l~--~~~~~~w~~R~~iA~~lL~~l~~l~~~~~   80 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSC----GRFYVVEYVGAGSLYGIYRPLS--QFLQSPWEQRAKIALQLLELLEELDHGPL   80 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeEC----CCEEEEEeecCccccccccccc--cccccCHHHHHHHHHHHHHHHHHHhcCCC
Confidence            347888888875 6999999999    45789999987765421   11  112468999999999999999999884  


Q ss_pred             CCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       175 ~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      ..+.-.|++++|+-+++++++|++|...+...
T Consensus        81 ~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   81 GFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             CcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence            24555699999999999999999999876543

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.50  E-value=4.1e-08  Score=93.25  Aligned_cols=177  Identities=10%  Similarity=-0.025  Sum_probs=131.6

Q ss_pred             ccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcc-cccccceeeeCCcceEEEecCCCC-CH
Q 018244           63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR-LANLLGCCCEGDERLLVAEYMPND-TL  140 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~~g-sL  140 (359)
                      ...++|+++.++|.+-...+....+.+...     ....-++++|.+++||| .+..++-+...+..++.++++.++ +-
T Consensus       248 h~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~  322 (829)
T KOG0576|consen  248 HNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSS  322 (829)
T ss_pred             HHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccc
Confidence            344889999999998433334446665543     33455899999999999 777788888888899999999877 22


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---CCcCCCcc
Q 018244          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLA  217 (359)
Q Consensus       141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---~~~~~t~~  217 (359)
                      .... ......+..-+...+.+.-+.+++++|+. --+|+|    ||+..+ +..+..||+......+.   +...+|+.
T Consensus       323 ~~~~-~~se~~~~~~~~~~~~r~et~~l~~l~~~-~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~~~~t~~~~~~  395 (829)
T KOG0576|consen  323 ALEM-TVSEIALEQYQFAYPLRKETRPLAELHSS-YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTMKPRTAIGTPE  395 (829)
T ss_pred             cccC-ChhhHhhhhhhhhhhhhhhcccccccccc-cccCcc----cccccc-cccccccccCCcccCcccccccCCCCCC
Confidence            2211 11223344556667777888899999987 568888    777664 78899999988766554   45678899


Q ss_pred             ccCcccccCCCCCCccchhhHHHHHHHHHhCCCC
Q 018244          218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI  251 (359)
Q Consensus       218 y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p  251 (359)
                      ++|||+...+.+....|+|++|.--.++--|-+|
T Consensus       396 ~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pP  429 (829)
T KOG0576|consen  396 PLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPP  429 (829)
T ss_pred             CCCchhhcccccccCCCccCCCcchhhcCCCCCC
Confidence            9999999999999999999999876666666544

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.42  E-value=2.9e-06  Score=74.43  Aligned_cols=136  Identities=15%  Similarity=0.098  Sum_probs=82.4

Q ss_pred             CCCCC-cEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEEEecCCCCCHhhh
Q 018244           66 GEKAP-NVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPNDTLAKH  143 (359)
Q Consensus        66 g~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~  143 (359)
                      ..|.. +.||+..... ..+.+|......   ...+.+|+++++.+. +--+.+++++....+..++|||+++|.+|...
T Consensus         7 ~~g~~~~~v~~~~~~~-~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~   82 (244)
T cd05150           7 TEGQSGATVYRLDGKN-PGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL   82 (244)
T ss_pred             CCCCCcCeEEEEcCCC-CcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence            33444 7899998644 578888876543   335677888888884 44455677776666678999999999777644


Q ss_pred             hh-------------------cCC--CCCCCHH--HHH-HH----------------------HHHHHHHHHHhh---cC
Q 018244          144 LF-------------------HWE--TQPMKWA--MRL-RV----------------------ALHIAEALEYCT---SK  174 (359)
Q Consensus       144 l~-------------------~~~--~~~l~~~--~~~-~i----------------------~~qi~~~L~~LH---~~  174 (359)
                      ..                   ...  ...+...  ... ..                      ..++...|....   ..
T Consensus        83 ~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (244)
T cd05150          83 WEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEED  162 (244)
T ss_pred             hcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCc
Confidence            21                   000  0011100  000 00                      111111111111   11


Q ss_pred             CCcccccCCCCCeeeCCCCCeEEeccCCccc
Q 018244          175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (359)
Q Consensus       175 ~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~  205 (359)
                      ..++|+|+.|.|||+++++.+.|+||+.+..
T Consensus       163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~  193 (244)
T cd05150         163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLGV  193 (244)
T ss_pred             eEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence            2589999999999999877788999997643

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PLN02876 acyl-CoA dehydrogenase

Probab=98.39  E-value=4.6e-06  Score=85.70  Aligned_cols=80  Identities=15%  Similarity=0.258  Sum_probs=57.9

Q ss_pred             ccccCCCCCCcEEEEEEeCCC---cEEEEEEeCCCCC-chHHHHHHHHHHHhcCC-Cccc--ccccceeeeC---CcceE
Q 018244           61 IVSEHGEKAPNVVYKGKLENQ---FRIAVKRFNRSAW-PDARQFLEEARAVGQLR-NRRL--ANLLGCCCEG---DERLL  130 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~ni--v~~~~~~~~~---~~~~l  130 (359)
                      .+..++.|.++.+|+....++   ..+++|+...... .....+.+|+++|+.+. |.++  .+++.++.+.   +..|+
T Consensus        42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl  121 (822)
T PLN02876         42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY  121 (822)
T ss_pred             eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence            356679999999999886553   3677787654321 23456889999999995 6665  6777777654   45789


Q ss_pred             EEecCCCCCH
Q 018244          131 VAEYMPNDTL  140 (359)
Q Consensus       131 v~e~~~~gsL  140 (359)
                      ||||++|..+
T Consensus       122 VME~v~G~~~  131 (822)
T PLN02876        122 IMEYLEGRIF  131 (822)
T ss_pred             EEEecCCccc
Confidence            9999988643

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.38  E-value=1.4e-06  Score=75.49  Aligned_cols=78  Identities=21%  Similarity=0.285  Sum_probs=55.5

Q ss_pred             cccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCc--ccccccceeee---CCcceEEEecCC
Q 018244           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNR--RLANLLGCCCE---GDERLLVAEYMP  136 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~---~~~~~lv~e~~~  136 (359)
                      ++.++.|..+.||+....+ ..+++|.....  .....+.+|..+++.+...  .+.+++.+...   ....+++|++++
T Consensus         2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~   78 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP   78 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred             CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence            3456889999999999877 48999997754  3456678888888888533  34566654322   234689999999


Q ss_pred             CCCHhh
Q 018244          137 NDTLAK  142 (359)
Q Consensus       137 ~gsL~~  142 (359)
                      +..+..
T Consensus        79 g~~~~~   84 (239)
T PF01636_consen   79 GRPLDD   84 (239)
T ss_dssp             SEEHHH
T ss_pred             cccccc
Confidence            987777

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.32  E-value=8.3e-06  Score=68.60  Aligned_cols=126  Identities=17%  Similarity=0.062  Sum_probs=88.4

Q ss_pred             cCCCCCCcEEEEEEeCCCcEEEEEEeCCCC----------------CchHHHHHHHHHHHhcCC------Ccccccccce
Q 018244           64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSA----------------WPDARQFLEEARAVGQLR------NRRLANLLGC  121 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~e~~~l~~l~------h~niv~~~~~  121 (359)
                      .||+|+.-.||.--.  .....||+.....                .....+..+|+.-...+.      +.+|.+++|+
T Consensus         8 ~i~~G~~R~cy~HP~--dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~   85 (199)
T PF10707_consen    8 LIAQGGERDCYQHPD--DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYGF   85 (199)
T ss_pred             ccccCCCceEEECCC--CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeEE
Confidence            359999999997643  3347888887655                122455666766555554      8899999999


Q ss_pred             eeeCCcceEEEecCCC------CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC--C
Q 018244          122 CCEGDERLLVAEYMPN------DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD--V  193 (359)
Q Consensus       122 ~~~~~~~~lv~e~~~~------gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~--~  193 (359)
                      ..+.-..-+|+|.+.+      -||.+++.   ...++. .....+.+   -..||-.+ +|+.+|++|+||++..+  +
T Consensus        86 veT~~G~Glv~e~I~d~dG~~s~TL~~~l~---~~~~~~-~~~~~L~~---f~~~l~~~-~Iv~~dl~~~NIv~~~~~~~  157 (199)
T PF10707_consen   86 VETNLGLGLVVELIRDADGNISPTLEDYLK---EGGLTE-ELRQALDE---FKRYLLDH-HIVIRDLNPHNIVVQRRDSG  157 (199)
T ss_pred             EecCCceEEEEEEEECCCCCcCccHHHHHH---cCCccH-HHHHHHHH---HHHHHHHc-CCeecCCCcccEEEEecCCC
Confidence            9999899999998643      27888883   344655 33333333   34566677 99999999999999632  2


Q ss_pred             --CeEEec
Q 018244          194 --NPRLSC  199 (359)
Q Consensus       194 --~~kl~D  199 (359)
                        .+.|+|
T Consensus       158 ~~~lvlID  165 (199)
T PF10707_consen  158 EFRLVLID  165 (199)
T ss_pred             ceEEEEEe
Confidence              477777

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=98.23  E-value=1.4e-05  Score=66.77  Aligned_cols=137  Identities=18%  Similarity=0.204  Sum_probs=94.4

Q ss_pred             CCCcccccCHHHHHHHhcCCCcccccccCCCCCC-cEEEEEEeCCCcEEEEEEeCC---CCC------------------
Q 018244           37 NVPVFCEYSIETLRTATSGFAMENIVSEHGEKAP-NVVYKGKLENQFRIAVKRFNR---SAW------------------   94 (359)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~-g~Vy~~~~~~~~~vavK~~~~---~~~------------------   94 (359)
                      ..|....|+...        .+.+.++.||.|.- |.||++... |..+|+|.+..   ...                  
T Consensus        25 ~gPKL~~F~~h~--------~~I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (207)
T PF13095_consen   25 PGPKLEPFTHHG--------DDIEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPA   95 (207)
T ss_pred             CCCCcCCcCCCC--------CcEeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhh
Confidence            455666665511        56778888999999 999999984 55899999321   000                  


Q ss_pred             chHHHHHHHHHHHhcCC---Cccc--ccccceeeeC------------------CcceEEEecCCCCCHhhhhhcCCCCC
Q 018244           95 PDARQFLEEARAVGQLR---NRRL--ANLLGCCCEG------------------DERLLVAEYMPNDTLAKHLFHWETQP  151 (359)
Q Consensus        95 ~~~~~~~~e~~~l~~l~---h~ni--v~~~~~~~~~------------------~~~~lv~e~~~~gsL~~~l~~~~~~~  151 (359)
                      .-...|..|.++..+|+   +.++  |+.+||..-.                  ....||.||++...           .
T Consensus        96 ~y~~PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~  164 (207)
T PF13095_consen   96 HYADPFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------P  164 (207)
T ss_pred             hhcChHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------c
Confidence            01124677888777775   4456  8888887432                  12357777776542           2


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCc
Q 018244          152 MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (359)
Q Consensus       152 l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a  203 (359)
                      ++..    -+.+|.+-|..+|.. ||+-+|+++.|..     .-+|+|||.+
T Consensus       165 ~~~~----~~~~~~~dl~~~~k~-gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  165 LQIR----DIPQMLRDLKILHKL-GIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             cchh----HHHHHHHHHHHHHHC-CeeeccCcccccc-----CCEEEecccC
Confidence            2333    345677778889999 9999999999987     5589999965

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.22  E-value=1.9e-05  Score=63.94  Aligned_cols=131  Identities=18%  Similarity=0.185  Sum_probs=88.8

Q ss_pred             cccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCccccc-ccceeeeCCcceEEEecCCCC
Q 018244           60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLAN-LLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        60 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~-~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      +..+.||+|.+|.||++.+.++ .+|+|+-..++  ....+..|.++|..+.-.++.. ++.|.    .-++.|||+.|-
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~~~-~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~yg----~~~i~me~i~G~   97 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWRGG-EVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFYG----EDFIRMEYIDGR   97 (201)
T ss_pred             hhhhhhhcccccEEEEeeccCc-eEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEec----hhhhhhhhhcCc
Confidence            4556789999999999998655 78888776543  2466888999999988666544 33333    334569999998


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCC-CCCeeeCCCCCeEEeccCCcccCC
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN-AYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dik-p~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      .|.+....     .+..++.    .++..-.-|... ||-|..|. |..+++.+++.+.|+||..|+.-.
T Consensus        98 ~L~~~~~~-----~~rk~l~----~vlE~a~~LD~~-GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k~  157 (201)
T COG2112          98 PLGKLEIG-----GDRKHLL----RVLEKAYKLDRL-GIEHGELSRPWKNVLVNDRDVYIIDFDSATFKK  157 (201)
T ss_pred             chhhhhhc-----ccHHHHH----HHHHHHHHHHHh-ccchhhhcCCceeEEecCCcEEEEEccchhhcc
Confidence            88776531     1333333    344443334444 89998774 555555556699999999987443

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.14  E-value=9.2e-06  Score=82.57  Aligned_cols=192  Identities=19%  Similarity=0.150  Sum_probs=138.7

Q ss_pred             HHHHHHHHhcCCCcccccccceeeeCCc----ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 018244          100 FLEEARAVGQLRNRRLANLLGCCCEGDE----RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE  175 (359)
Q Consensus       100 ~~~e~~~l~~l~h~niv~~~~~~~~~~~----~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~  175 (359)
                      ..-|+..+..+.|+|++.++.|......    ..+..+++...++.+.+.  .-...+....+.+..+...||.|+|+. 
T Consensus       229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q--~v~~i~~~~~r~~~~~~~~GL~~~h~~-  305 (1351)
T KOG1035|consen  229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQ--SVGSIPLETLRILHQKLLEGLAYLHSL-  305 (1351)
T ss_pred             HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHh--hccccCHHHHHHHHHHHhhhHHHHHHh-
Confidence            3457778888899999999998765433    334567888888888886  456678889999999999999999998 


Q ss_pred             CcccccCCCC---CeeeCCCCCeEEe--ccCCcccCCCCCC---cCCCccccCcccccCCCCCC--ccchhhHHHHHHHH
Q 018244          176 RALYHDLNAY---RIVFDDDVNPRLS--CFGLMKNSRDGRS---YSTNLAFTPPEYLRTGRVTP--ESVMYSFGTLLLDL  245 (359)
Q Consensus       176 ~ivH~Dikp~---NIll~~~~~~kl~--DFg~a~~~~~~~~---~~~t~~y~aPE~~~~~~~~~--~~Di~slG~il~el  245 (359)
                      ...|.-+..+   +...+..+.+..+  ||+..........   ...+..+.|||......+..  ..|+|.+|.....+
T Consensus       306 ~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~  385 (1351)
T KOG1035|consen  306 SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQL  385 (1351)
T ss_pred             ccceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhh
Confidence            6666655555   5555666777777  8888776654432   23345688888887666554  47999999999999


Q ss_pred             HhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       246 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ..|..+.....           .....+.    ........+...+|+..++++|+++.+++..
T Consensus       386 ~~~~~i~~~~~-----------~~~~~l~----~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~  434 (1351)
T KOG1035|consen  386 SQGEDISEKSA-----------VPVSLLD----VLSTSELLDALPKCLDEDSEERLSALELLTH  434 (1351)
T ss_pred             hhcCccccccc-----------chhhhhc----cccchhhhhhhhhhcchhhhhccchhhhhhc
Confidence            98875432211           0011111    1111157889999999999999999999976

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.05  E-value=3.5e-05  Score=67.18  Aligned_cols=72  Identities=15%  Similarity=0.120  Sum_probs=43.3

Q ss_pred             cCCCCCCc-EEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCc---ccccccceeeeC---CcceEEEecCC
Q 018244           64 EHGEKAPN-VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNR---RLANLLGCCCEG---DERLLVAEYMP  136 (359)
Q Consensus        64 ~lg~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~---~~~~lv~e~~~  136 (359)
                      .++.|+.. .||+..    ..+.+|......  ....+.+|.++|..+...   .+.+.++.....   ...+++|++++
T Consensus         4 ~~~~gG~~n~vy~~~----~~~VlR~~~~~~--~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~   77 (235)
T cd05155           4 PVDSGGTDNATFRLG----DDMSVRLPSAAG--YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLE   77 (235)
T ss_pred             eccCCCcccceEEcC----CceEEEcCCccc--hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeec
Confidence            34555554 588762    246778755422  244688899999888532   234444433322   23488999999


Q ss_pred             CCCHh
Q 018244          137 NDTLA  141 (359)
Q Consensus       137 ~gsL~  141 (359)
                      |.++.
T Consensus        78 G~~l~   82 (235)
T cd05155          78 GETAT   82 (235)
T ss_pred             CCCCC
Confidence            87664

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PRK10593 hypothetical protein; Provisional

Probab=98.03  E-value=7.2e-05  Score=67.53  Aligned_cols=77  Identities=12%  Similarity=0.033  Sum_probs=55.6

Q ss_pred             ccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCC---cccccccceeee---CCcceEEEec
Q 018244           61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN---RRLANLLGCCCE---GDERLLVAEY  134 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~~~~~~~~---~~~~~lv~e~  134 (359)
                      -++.||.|..+.||.....++ .+.+|..+..  .....+..|...|+.|.-   -.+.++++++..   .+..+||||+
T Consensus        18 ~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~   94 (297)
T PRK10593         18 RVECISEQPYAALWALYDSQG-NPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLER   94 (297)
T ss_pred             eeeecCCccceeEEEEEcCCC-CEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEec
Confidence            345679999999999987666 4666775431  123578889999988853   357777877654   3568999999


Q ss_pred             CCCCCH
Q 018244          135 MPNDTL  140 (359)
Q Consensus       135 ~~~gsL  140 (359)
                      ++++++
T Consensus        95 i~G~~~  100 (297)
T PRK10593         95 LRGVSV  100 (297)
T ss_pred             cCCEec
Confidence            998765

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.95  E-value=6.7e-05  Score=66.29  Aligned_cols=136  Identities=14%  Similarity=0.098  Sum_probs=77.3

Q ss_pred             CCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCccc-ccccceeeeCCcceEEEecCCCCCHhhh
Q 018244           65 HGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLVAEYMPNDTLAKH  143 (359)
Q Consensus        65 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~gsL~~~  143 (359)
                      +..|-.+.+|+... ++..+++|..........-...+|..+++.+...++ .+++...    .-++||||++|..+...
T Consensus         4 ~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~----~~~~v~e~i~G~~~~~~   78 (256)
T TIGR02721         4 LSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN----EHWLLVEWLEGEVITLD   78 (256)
T ss_pred             CCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe----CCEEEEEeccCcccccc
Confidence            45677889999874 455788887654332211134678888888864433 3333332    24789999998665421


Q ss_pred             --------------hh---cCC--CCCCCH-HHHHHHHHHH---------HHHHHHhhc-------CCCcccccCCCCCe
Q 018244          144 --------------LF---HWE--TQPMKW-AMRLRVALHI---------AEALEYCTS-------KERALYHDLNAYRI  187 (359)
Q Consensus       144 --------------l~---~~~--~~~l~~-~~~~~i~~qi---------~~~L~~LH~-------~~~ivH~Dikp~NI  187 (359)
                                    +.   ...  ...++. ..+..+..++         ...+..+-.       ...++|+|+.|.||
T Consensus        79 ~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Ni  158 (256)
T TIGR02721        79 QFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNL  158 (256)
T ss_pred             cccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcE
Confidence                          11   000  111121 1111221111         111111211       12579999999999


Q ss_pred             eeCCCCCeEEeccCCcccC
Q 018244          188 VFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       188 ll~~~~~~kl~DFg~a~~~  206 (359)
                      ++++++ +.|+||..+...
T Consensus       159 l~~~~~-~~lIDwE~a~~g  176 (256)
T TIGR02721       159 VVTPQG-LKLIDWEYASDG  176 (256)
T ss_pred             EEeCCC-CEEEeccccCcC
Confidence            999876 789999987543

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.85  E-value=0.00013  Score=63.45  Aligned_cols=73  Identities=19%  Similarity=0.149  Sum_probs=47.0

Q ss_pred             ccCCCCCCcEEEEEEeCC--CcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCccc-ccccceeeeCCcceEEEecCCCCC
Q 018244           63 SEHGEKAPNVVYKGKLEN--QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLVAEYMPNDT  139 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~gs  139 (359)
                      +.|..|-.+.+|+....+  +..+.+|........ .....+|+.++..+...++ +++++.+.    -.++|||++|.+
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~   78 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRT   78 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCc
Confidence            345778888999998664  668999977643221 1223468888888854333 44443322    248999998866


Q ss_pred             H
Q 018244          140 L  140 (359)
Q Consensus       140 L  140 (359)
                      +
T Consensus        79 l   79 (235)
T cd05157          79 L   79 (235)
T ss_pred             C
Confidence            5

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.85  E-value=0.00048  Score=62.55  Aligned_cols=158  Identities=13%  Similarity=0.139  Sum_probs=87.8

Q ss_pred             cCHHHHHHHhcCC--CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcc--ccccc
Q 018244           44 YSIETLRTATSGF--AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANLL  119 (359)
Q Consensus        44 ~~~~~~~~~~~~~--~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~  119 (359)
                      .+.++|...-..|  ..-..+..++.|....+|+....+| .+.+|+......  ......|++++..|...+  +++++
T Consensus         7 ~~~~~l~~~l~~y~~~~~~~i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~~--~~~i~~e~~~l~~L~~~g~pvp~~i   83 (307)
T TIGR00938         7 VSDEEMSSFLDGYDLGELLSLKGIAEGVENSNYLLTTDVG-RYILTLYEKRVK--AEELPFFLALTTHLAARGLPVPKPV   83 (307)
T ss_pred             CCHHHHHHHHHhcCCCCceeccccCCccccceEEEEeCCC-cEEEEEecCCCC--HHHHHHHHHHHHHHHHCCCCCCccc
Confidence            3445554443333  2233456667787789999886655 577888755321  234556677776664222  33443


Q ss_pred             cee------eeCCcceEEEecCCCCCHhh-----------hh---hcC-CC------C---CCCHHHHH-----------
Q 018244          120 GCC------CEGDERLLVAEYMPNDTLAK-----------HL---FHW-ET------Q---PMKWAMRL-----------  158 (359)
Q Consensus       120 ~~~------~~~~~~~lv~e~~~~gsL~~-----------~l---~~~-~~------~---~l~~~~~~-----------  158 (359)
                      ...      ...+..+++++|++|..+..           .+   +.. ..      .   .-.|....           
T Consensus        84 ~t~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~  163 (307)
T TIGR00938        84 KSRDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLE  163 (307)
T ss_pred             cCCCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccC
Confidence            321      12345689999998854321           01   100 00      0   01111110           


Q ss_pred             -HHHHHHHHHHHHhhc------CCCcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          159 -RVALHIAEALEYCTS------KERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       159 -~i~~qi~~~L~~LH~------~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                       .....+...++++..      ..+++|+|+++.||++++++.+.|+||+.+.
T Consensus       164 ~~~~~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       164 AHMGAELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             HHHHHHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence             001122334455532      2489999999999999988777899999864

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.84  E-value=0.00026  Score=63.90  Aligned_cols=139  Identities=14%  Similarity=0.166  Sum_probs=82.3

Q ss_pred             cccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcc--cccccce------eeeCCcceEEEe
Q 018244           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANLLGC------CCEGDERLLVAE  133 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~------~~~~~~~~lv~e  133 (359)
                      ++.+..|....+|+....++ .+++|+....   .......|++++..+.+.+  +.+++..      ....+..++|++
T Consensus        19 i~~i~~G~~n~~y~v~~~~~-~~vLr~~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~   94 (296)
T cd05153          19 FEGISAGIENTNYFVTTDSG-RYVLTLFEKV---SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE   94 (296)
T ss_pred             eecccCccccceEEEEeCCC-cEEEEEcCCC---ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence            45667788789999886555 6888987652   2345667788777774332  3444331      122345689999


Q ss_pred             cCCCCCHhh----hh----------hcC----CC-----CCCCHHHHH----------HHHHHHHHHHHHhhc------C
Q 018244          134 YMPNDTLAK----HL----------FHW----ET-----QPMKWAMRL----------RVALHIAEALEYCTS------K  174 (359)
Q Consensus       134 ~~~~gsL~~----~l----------~~~----~~-----~~l~~~~~~----------~i~~qi~~~L~~LH~------~  174 (359)
                      |++|..+..    ..          +..    ..     ....|....          .....+..++.++..      .
T Consensus        95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~  174 (296)
T cd05153          95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP  174 (296)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence            998865432    00          000    00     011111110          011112333444442      1


Q ss_pred             CCcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       175 ~~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                      .+++|+|+.|.||++++++.+.|+||+.+.
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence            379999999999999988777899999764

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.69  E-value=0.0011  Score=61.99  Aligned_cols=76  Identities=16%  Similarity=0.158  Sum_probs=53.5

Q ss_pred             ccccCCCCCCcEEEEEEeCCC-cEEEEEEeCCC------CC-chHHHHHHHHHHHhcCC-C--cccccccceeeeCCcce
Q 018244           61 IVSEHGEKAPNVVYKGKLENQ-FRIAVKRFNRS------AW-PDARQFLEEARAVGQLR-N--RRLANLLGCCCEGDERL  129 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~------~~-~~~~~~~~e~~~l~~l~-h--~niv~~~~~~~~~~~~~  129 (359)
                      ..+.+|.|.++.||++...+| +.+.||.-...      .+ -..+....|.+.|..+. +  .++++++.+  +.+..+
T Consensus        30 ~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~  107 (401)
T PRK09550         30 TAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAV  107 (401)
T ss_pred             eeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCE
Confidence            345779999999999998776 48999985421      11 13456677888888863 2  346666655  446688


Q ss_pred             EEEecCCCC
Q 018244          130 LVAEYMPND  138 (359)
Q Consensus       130 lv~e~~~~g  138 (359)
                      +||||+++.
T Consensus       108 lVME~L~~~  116 (401)
T PRK09550        108 TVMEDLSDH  116 (401)
T ss_pred             EEEecCCCc
Confidence            999999764

>PRK05231 homoserine kinase; Provisional

Probab=97.69  E-value=0.00096  Score=60.92  Aligned_cols=159  Identities=13%  Similarity=0.092  Sum_probs=83.8

Q ss_pred             ccCHHHHHHHhcCCCc--ccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcc--cccc
Q 018244           43 EYSIETLRTATSGFAM--ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANL  118 (359)
Q Consensus        43 ~~~~~~~~~~~~~~~~--~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~  118 (359)
                      ..+.+++...-..|..  -.-++.++.|....+|.....+| .+++|++....   .+.+..|+.++..|...+  +.+.
T Consensus         6 ~ls~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~~g-~~vLK~~~~~~---~~~l~~~~~~l~~L~~~glpvP~~   81 (319)
T PRK05231          6 DVSDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTTQG-EYVLTLFERLT---AEDLPFFLGLMQHLAARGVPVPAP   81 (319)
T ss_pred             cCCHHHHHHHHHhcCCchhhccchhccccccceEEEEeCCC-cEEEEEeccCC---hHHhHHHHHHHHHHHHCCCCCCcc
Confidence            3455555544444432  12234556777789999987666 68889876212   233444555555553222  2233


Q ss_pred             cc------eeeeCCcceEEEecCCCCCHh-----------hhhh---cC-CC--------CCCCH-HHHHH---------
Q 018244          119 LG------CCCEGDERLLVAEYMPNDTLA-----------KHLF---HW-ET--------QPMKW-AMRLR---------  159 (359)
Q Consensus       119 ~~------~~~~~~~~~lv~e~~~~gsL~-----------~~l~---~~-~~--------~~l~~-~~~~~---------  159 (359)
                      +.      +....+..+++++|++|..+.           ..+.   .. ..        ..+.| .....         
T Consensus        82 i~~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (319)
T PRK05231         82 VARRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADE  161 (319)
T ss_pred             eeCCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChh
Confidence            22      112245578999999886431           1111   00 00        01111 11110         


Q ss_pred             ---HHHH-HHHHHHHhhc------CCCcccccCCCCCeeeCCCCCeEEeccCCccc
Q 018244          160 ---VALH-IAEALEYCTS------KERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (359)
Q Consensus       160 ---i~~q-i~~~L~~LH~------~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~  205 (359)
                         .+.+ +...+..+..      ..+++|+|++|.||+++++...-|+||+.+..
T Consensus       162 ~~~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        162 QAALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             HHHHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence               1111 1111222221      13799999999999999765568999998653

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=97.57  E-value=0.0011  Score=59.12  Aligned_cols=31  Identities=23%  Similarity=0.213  Sum_probs=25.8

Q ss_pred             CcccccCCCCCeeeCCCCC-eEEeccCCcccC
Q 018244          176 RALYHDLNAYRIVFDDDVN-PRLSCFGLMKNS  206 (359)
Q Consensus       176 ~ivH~Dikp~NIll~~~~~-~kl~DFg~a~~~  206 (359)
                      .++|+|++|.||++++++. .-|+||+.+...
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG  217 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVG  217 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence            5799999999999997555 469999987654

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.52  E-value=0.00017  Score=64.20  Aligned_cols=147  Identities=14%  Similarity=0.077  Sum_probs=100.2

Q ss_pred             cCHHHHHHHhcCCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc--------------------h--HHHHH
Q 018244           44 YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--------------------D--ARQFL  101 (359)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------~--~~~~~  101 (359)
                      +.+-.|.+..+.-.-+.+-.+||-|--+.||.+...+|...++|.-......                    -  .-...
T Consensus        79 yDyLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~  158 (465)
T KOG2268|consen   79 YDYLALKTLSNRGSVESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAAT  158 (465)
T ss_pred             chHHHHHHHHhcchhhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHH
Confidence            4455666666665566777788999999999999988999999964321100                    0  11245


Q ss_pred             HHHHHHhcCCC-c-ccccccceeeeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCccc
Q 018244          102 EEARAVGQLRN-R-RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY  179 (359)
Q Consensus       102 ~e~~~l~~l~h-~-niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH  179 (359)
                      +|+..|+.|.. - -+.+.+++.    .-++|||++.+-.|...-.     ..+..++..   .+..-+--|-.+ |+||
T Consensus       159 kEfafmkaL~e~gfpVPkpiD~~----RH~Vvmelv~g~Pl~~v~~-----v~d~~~ly~---~lm~~Iv~la~~-GlIH  225 (465)
T KOG2268|consen  159 KEFAFMKALYERGFPVPKPIDHN----RHCVVMELVDGYPLRQVRH-----VEDPPTLYD---DLMGLIVRLANH-GLIH  225 (465)
T ss_pred             HHHHHHHHHHHcCCCCCCccccc----ceeeHHHhhcccceeeeee-----cCChHHHHH---HHHHHHHHHHHc-Ccee
Confidence            68888888853 2 344555544    5689999998877765431     223333333   333333445566 9999


Q ss_pred             ccCCCCCeeeCCCCCeEEeccCCc
Q 018244          180 HDLNAYRIVFDDDVNPRLSCFGLM  203 (359)
Q Consensus       180 ~Dikp~NIll~~~~~~kl~DFg~a  203 (359)
                      +|..-=||++++++.++++||-..
T Consensus       226 gDFNEFNimv~dd~~i~vIDFPQm  249 (465)
T KOG2268|consen  226 GDFNEFNIMVKDDDKIVVIDFPQM  249 (465)
T ss_pred             cccchheeEEecCCCEEEeechHh
Confidence            999999999999999999999753

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=97.49  E-value=0.0015  Score=59.23  Aligned_cols=146  Identities=15%  Similarity=0.140  Sum_probs=101.9

Q ss_pred             cCCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCC--c--------------------hHH----HHHHHHHHH
Q 018244           54 SGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--P--------------------DAR----QFLEEARAV  107 (359)
Q Consensus        54 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~--------------------~~~----~~~~e~~~l  107 (359)
                      +.-..-++-+.|..|--+-||.|+..+|..+|||+++-+-.  .                    ..+    -...|++.|
T Consensus       141 ~RG~i~~inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNL  220 (520)
T KOG2270|consen  141 NRGVIVEINGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNL  220 (520)
T ss_pred             hcCeeeecccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHH
Confidence            33344456667788888899999988999999998752100  0                    011    135688888


Q ss_pred             hcCCCcccccccceeeeCCcceEEEecCCCCCHh-hhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCC
Q 018244          108 GQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA-KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR  186 (359)
Q Consensus       108 ~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~-~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~N  186 (359)
                      ++|....|.-.--....  .-.|||+++...... -.|   +.-.++...+..+-.|++.-+.-|-+..++||.||.-=|
T Consensus       221 kRl~~aGIP~PePIlLk--~hVLVM~FlGrdgw~aPkL---Kd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN  295 (520)
T KOG2270|consen  221 KRLNNAGIPCPEPILLK--NHVLVMEFLGRDGWAAPKL---KDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFN  295 (520)
T ss_pred             HHHHhcCCCCCCceeee--cceEeeeeccCCCCcCccc---ccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhh
Confidence            88876665443333322  347899998543221 122   445677778888889999988888776699999999999


Q ss_pred             eeeCCCCCeEEeccCCccc
Q 018244          187 IVFDDDVNPRLSCFGLMKN  205 (359)
Q Consensus       187 Ill~~~~~~kl~DFg~a~~  205 (359)
                      +|+- +|.+.++|-+.+-.
T Consensus       296 ~Lyh-dG~lyiIDVSQSVE  313 (520)
T KOG2270|consen  296 LLYH-DGKLYIIDVSQSVE  313 (520)
T ss_pred             heEE-CCEEEEEEcccccc
Confidence            9987 67899999886543

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.48  E-value=0.00085  Score=60.75  Aligned_cols=73  Identities=22%  Similarity=0.292  Sum_probs=46.9

Q ss_pred             cCCCCCCcEEEEEEeCC-------CcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCccc-ccccceeeeCCcceEEEecC
Q 018244           64 EHGEKAPNVVYKGKLEN-------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~  135 (359)
                      .+..|-...+|+....+       +..+++|+..... .......+|.+++..+...++ .++++++.    -.+|+||+
T Consensus         5 ~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~----~~~v~e~i   79 (302)
T cd05156           5 KISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFP----NGRIEEFI   79 (302)
T ss_pred             EecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeC----CCchhhee
Confidence            34567777899998654       4789999976543 222345678888888853333 34444442    23689999


Q ss_pred             CCCCHh
Q 018244          136 PNDTLA  141 (359)
Q Consensus       136 ~~gsL~  141 (359)
                      +|.++.
T Consensus        80 ~G~~l~   85 (302)
T cd05156          80 PSRTLT   85 (302)
T ss_pred             CCCcCC
Confidence            887654

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=97.34  E-value=0.0052  Score=55.50  Aligned_cols=152  Identities=13%  Similarity=0.086  Sum_probs=84.8

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCC--CCCchHHHHHHHHHHHhcCCC--cccccccceeeeCC--cce
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNR--SAWPDARQFLEEARAVGQLRN--RRLANLLGCCCEGD--ERL  129 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~--~~~  129 (359)
                      +....+++....|....+|..... ++.+++. ...  ..........+|..+++.+.-  --....+++|.++.  ..|
T Consensus        24 ~~~~~~v~~~~~G~sn~t~~~~~~-~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf  101 (321)
T COG3173          24 YAGLLIVEEISGGWSNDTFRLGDT-GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPF  101 (321)
T ss_pred             cCCCceeeeccCCcccceEEEecC-CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCce
Confidence            344445555444444455555543 6678888 331  222334455677777777642  23445566666655  679


Q ss_pred             EEEecCCCCCHhhhhhcC------------------------------CCCCCCHHHHHHHHHHH--------------H
Q 018244          130 LVAEYMPNDTLAKHLFHW------------------------------ETQPMKWAMRLRVALHI--------------A  165 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~------------------------------~~~~l~~~~~~~i~~qi--------------~  165 (359)
                      .||+|++|..+.+.+...                              ........++..+..+.              .
T Consensus       102 ~v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~  181 (321)
T COG3173         102 YVMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLAD  181 (321)
T ss_pred             EEEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHH
Confidence            999999884332222100                              00000111111222222              1


Q ss_pred             HHHHHhhcC-------CCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          166 EALEYCTSK-------ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       166 ~~L~~LH~~-------~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      .-..+++.+       ..++|+|+++.||+++..+-+-|.||+++...++.
T Consensus       182 ~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP~  232 (321)
T COG3173         182 RLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDPL  232 (321)
T ss_pred             HHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCCcH
Confidence            112233322       35899999999999998888999999998776544

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=97.22  E-value=0.0039  Score=57.17  Aligned_cols=72  Identities=14%  Similarity=0.063  Sum_probs=46.9

Q ss_pred             cCCCCCCcEEEEEEeCCC-cEEEEEEeCC------CC-CchHHHHHHHHHHHhcCC--Ccc-cccccceeeeCCcceEEE
Q 018244           64 EHGEKAPNVVYKGKLENQ-FRIAVKRFNR------SA-WPDARQFLEEARAVGQLR--NRR-LANLLGCCCEGDERLLVA  132 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~-~~vavK~~~~------~~-~~~~~~~~~e~~~l~~l~--h~n-iv~~~~~~~~~~~~~lv~  132 (359)
                      ++|.|....||++..++| +.|+||.-..      .+ .-..++..-|...|+...  -|. +++++  +.+++...+||
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy--~~D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIF--HFDTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEE--EEccccceehH
Confidence            569999999999997654 5899997531      11 122445566778887763  343 33433  23456677999


Q ss_pred             ecCCC
Q 018244          133 EYMPN  137 (359)
Q Consensus       133 e~~~~  137 (359)
                      |+++.
T Consensus        80 EdL~~   84 (370)
T TIGR01767        80 EDLSH   84 (370)
T ss_pred             hhCcc
Confidence            99854

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PLN02756 S-methyl-5-thioribose kinase

Probab=97.21  E-value=0.0067  Score=56.67  Aligned_cols=81  Identities=19%  Similarity=0.147  Sum_probs=53.2

Q ss_pred             ccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCC------C-chHHHHHHHHHHHhcCC---CcccccccceeeeCCcceE
Q 018244           61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA------W-PDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~------~-~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~l  130 (359)
                      ..+.+|.|....||+.... +..+.||+-....      + -...+...|...|+.+.   ..++++++.++.  +..++
T Consensus        36 ~~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vl  112 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALI  112 (418)
T ss_pred             eEEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEE
Confidence            4567799999999998864 4468899865211      1 12334455677776663   247777887775  45788


Q ss_pred             EEecCCC--CCHhhhh
Q 018244          131 VAEYMPN--DTLAKHL  144 (359)
Q Consensus       131 v~e~~~~--gsL~~~l  144 (359)
                      +|||+++  ..+.+.+
T Consensus       113 vME~L~~~~~ilr~~L  128 (418)
T PLN02756        113 GMRYLEPPHIILRKGL  128 (418)
T ss_pred             EEeecCCcceehhhhh
Confidence            9999976  2344444

>PLN02236 choline kinase

Probab=97.19  E-value=0.0026  Score=58.73  Aligned_cols=139  Identities=14%  Similarity=0.106  Sum_probs=80.3

Q ss_pred             cccCCCCCCcEEEEEEeCC-----CcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCccc-ccccceeeeCCcceEEEecC
Q 018244           62 VSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~  135 (359)
                      +..+..|-...+|++...+     +..|.+|........... -.+|+.+++.+..-++ .++++.+..    ..|++|+
T Consensus        41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~----g~v~efi  115 (344)
T PLN02236         41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFD-RDDEIRTFECMSRHGQGPRLLGRFPN----GRVEEFI  115 (344)
T ss_pred             EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeec-hHHHHHHHHHHHHcCCCCceEEEECC----ceEEEee
Confidence            3445557788999987532     367899988765422222 2668888888854444 345555422    2589999


Q ss_pred             CCCCHhhh-----------------hhcCC--C-C-CCCHHHHHHHHHHHH-----------------HHHHH----hhc
Q 018244          136 PNDTLAKH-----------------LFHWE--T-Q-PMKWAMRLRVALHIA-----------------EALEY----CTS  173 (359)
Q Consensus       136 ~~gsL~~~-----------------l~~~~--~-~-~l~~~~~~~i~~qi~-----------------~~L~~----LH~  173 (359)
                      ++.+|...                 ++...  . . ...+..+..+..++.                 ..+..    +..
T Consensus       116 ~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~  195 (344)
T PLN02236        116 HARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSG  195 (344)
T ss_pred             CCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcc
Confidence            77665421                 00000  0 0 112333434432221                 11111    121


Q ss_pred             ---CCCcccccCCCCCeeeCC-CCCeEEeccCCccc
Q 018244          174 ---KERALYHDLNAYRIVFDD-DVNPRLSCFGLMKN  205 (359)
Q Consensus       174 ---~~~ivH~Dikp~NIll~~-~~~~kl~DFg~a~~  205 (359)
                         ...++|+|+++.||++++ ++.+.++||..+..
T Consensus       196 ~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        196 DDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             cCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence               125799999999999986 47899999988653

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=97.14  E-value=7.5e-05  Score=78.15  Aligned_cols=153  Identities=11%  Similarity=-0.064  Sum_probs=112.0

Q ss_pred             HHHHHHHHhcCCCcccccccceeee--CCcceEEEecCCCCCHhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHhhcC-
Q 018244          100 FLEEARAVGQLRNRRLANLLGCCCE--GDERLLVAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSK-  174 (359)
Q Consensus       100 ~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~-  174 (359)
                      ...|...++...|+++.....-...  ....+..++|+.+|.+.+.+.+..  ...+....+.....+...+..-+|+. 
T Consensus      1276 ll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred             hhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc
Confidence            4456666667789988876654433  235788999999999999887532  22333333444334436777777754 


Q ss_pred             ---CCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCc----CCCccccCcccccCCCCCCccchhhHHHHHHHHHh
Q 018244          175 ---ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY----STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS  247 (359)
Q Consensus       175 ---~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~----~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt  247 (359)
                         .-.+|+++|+-|.+|+.+.+++++++|+.+...+....    .+++-|++|++...-.++.++|+|..|+-+|++.-
T Consensus      1356 nlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~ 1435 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSD 1435 (2724)
T ss_pred             cCCccchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhc
Confidence               23589999999999999999999999999955544433    44567888998887788888999999999999988


Q ss_pred             CCCCC
Q 018244          248 GKHIP  252 (359)
Q Consensus       248 g~~p~  252 (359)
                      |..++
T Consensus      1436 ~n~~f 1440 (2724)
T KOG1826|consen 1436 GNAYF 1440 (2724)
T ss_pred             ccHHH
Confidence            77543

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=97.06  E-value=0.0064  Score=55.24  Aligned_cols=29  Identities=14%  Similarity=0.072  Sum_probs=25.4

Q ss_pred             CCcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       175 ~~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                      .+++|+|+++.||+++. +.+.|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            37899999999999987 678999999754

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=97.06  E-value=0.0038  Score=55.89  Aligned_cols=74  Identities=18%  Similarity=0.166  Sum_probs=46.7

Q ss_pred             ccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC---CcccccccceeeeCCcceEEEecCCC
Q 018244           61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLLVAEYMPN  137 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~  137 (359)
                      .+..++.|....+|+.. .++..+-||.-...   ....+..|..-|+.|.   --.+++.+++....+..+||+||++.
T Consensus        21 ~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~~---~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~   96 (288)
T PF03881_consen   21 SIEPVSGGDINEAYRLD-TDGGSYFVKVNSES---GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEM   96 (288)
T ss_dssp             EEEEE--SSSSEEEEEE-TTS-EEEEEEEEGG---GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE----
T ss_pred             eeEecCCCChhheEEEE-CCCccEEEEecChh---hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecC
Confidence            34455889999999988 56678999987732   2345677888777773   34577888888777788999999876


Q ss_pred             C
Q 018244          138 D  138 (359)
Q Consensus       138 g  138 (359)
                      +
T Consensus        97 ~   97 (288)
T PF03881_consen   97 G   97 (288)
T ss_dssp             -
T ss_pred             C
Confidence            5

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=96.94  E-value=0.0029  Score=58.28  Aligned_cols=60  Identities=17%  Similarity=0.077  Sum_probs=43.9

Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD  190 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~  190 (359)
                      ..|+-+|..|-++..++.   ....++....+++.-.+.|+--+---.+.+|.|++|.||++-
T Consensus       320 ~vl~E~~~~Gl~v~~~v~---~~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlir  379 (565)
T KOG1236|consen  320 LVLVETYERGLSVLRFVK---WKSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIR  379 (565)
T ss_pred             ceeeeeccccccHHhhhh---cccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEE
Confidence            456667888989998884   444556666777777777765443323789999999999995

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=96.88  E-value=0.0031  Score=59.63  Aligned_cols=161  Identities=20%  Similarity=0.247  Sum_probs=90.0

Q ss_pred             hHHHHHHHHHHHhcCCCcccccccceeeeC-CcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 018244           96 DARQFLEEARAVGQLRNRRLANLLGCCCEG-DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK  174 (359)
Q Consensus        96 ~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~  174 (359)
                      ...++...++.++.+.|+|...++++.... ....+|+|++ +.||.+.+..+.   +-....          +    .+
T Consensus        25 ~s~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~~---l~~~s~----------~----~~   86 (725)
T KOG1093|consen   25 NSIQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTGN---LKDESL----------L----AH   86 (725)
T ss_pred             cHHHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhcc---cchhhh----------c----cc
Confidence            345677789999999999999998877553 3478899998 559999885322   211110          0    11


Q ss_pred             CCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCc
Q 018244          175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (359)
Q Consensus       175 ~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~  254 (359)
                       ++.|-     ||+       +.+| -++.   ..           |     ....+++||||+|.++.++.-|...+..
T Consensus        87 -~~~~~-----~~~-------~~td-~~~t---~~-----------~-----~~~~pKsdVwsl~~i~~el~L~~~l~~~  133 (725)
T KOG1093|consen   87 -GVLHL-----NII-------YITD-HFLT---KY-----------P-----SPIGPKSDVWSLGFIILELYLGISLEAE  133 (725)
T ss_pred             -cccee-----hhh-------hccc-cccc---cC-----------C-----CCCCcchhhhhHHHHHHHHHHhhHHHHH
Confidence             22222     222       2222 0000   00           0     1112499999999999999988854332


Q ss_pred             chhHHHhhhhhhhhccccc------cCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 018244          255 HALDLIRDRNIQTLTDSCL------EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV  307 (359)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il  307 (359)
                      ................+..      ...+...+....+++...|+-..|..||...++.
T Consensus       134 ~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~  192 (725)
T KOG1093|consen  134 LTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELS  192 (725)
T ss_pred             HHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhHHh
Confidence            2111111111000000000      0011234566788899999999999988655443

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=96.87  E-value=0.0045  Score=52.37  Aligned_cols=151  Identities=13%  Similarity=0.062  Sum_probs=90.6

Q ss_pred             CCCcEEEEEEeCCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCCHhhhhhc
Q 018244           68 KAPNVVYKGKLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH  146 (359)
Q Consensus        68 G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~  146 (359)
                      ++.++.-+++.+-| ...+|++...... ...-|.++.+++.++.  .|+++..-  ..-..-+|.|+|..-..      
T Consensus        73 ~gNsTl~~~kt~iG-~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i------  141 (308)
T PF07387_consen   73 NGNSTLLIGKTKIG-PLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI------  141 (308)
T ss_pred             CCceEEEEeccccc-hhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc------
Confidence            45556666654445 3445555433322 3445677888888875  66776632  33346688898854211      


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCcCCCccccCccccc
Q 018244          147 WETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLR  225 (359)
Q Consensus       147 ~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~t~~y~aPE~~~  225 (359)
                           ..    ..++..=+.+|.-.|+ +.+.+|+|..|+||+-|..|.+||.|=+.--        ..+..|.--|   
T Consensus       142 -----~~----~N~i~agi~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll--------~~~V~~vN~~---  201 (308)
T PF07387_consen  142 -----NF----SNFITAGIKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVCLL--------ENQVNMVNIE---  201 (308)
T ss_pred             -----ch----hHHHHHhHHHHHHhhccCCCeecCCCChhheeecCCCCEEecChhhhh--------hheeeEEeee---
Confidence                 11    1222223467778884 4589999999999999999999999966321        1111222211   


Q ss_pred             CCCCCCccchhhHHHHHHHHHhCC
Q 018244          226 TGRVTPESVMYSFGTLLLDLLSGK  249 (359)
Q Consensus       226 ~~~~~~~~Di~slG~il~elltg~  249 (359)
                      ....+.++.+-+|=..+++++...
T Consensus       202 Y~~lT~~aE~~~fv~s~l~~v~~~  225 (308)
T PF07387_consen  202 YESLTQEAEVKVFVKSCLKLVEKQ  225 (308)
T ss_pred             ccccChHHHHHHHHHHHHHHHHHH
Confidence            133466777777777777776544

The function of this family is unknown.

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=96.79  E-value=0.013  Score=53.35  Aligned_cols=106  Identities=14%  Similarity=0.046  Sum_probs=71.4

Q ss_pred             CcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCccc
Q 018244          126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (359)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~  205 (359)
                      ...|++|++- |+++. .+     ..-.+.++..++.+.+..++-+..+...-|||+.-.||||+ +|++-|+||-+++.
T Consensus       299 ~y~yl~~kdh-gt~is-~i-----k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl  370 (488)
T COG5072         299 LYLYLHFKDH-GTPIS-II-----KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL  370 (488)
T ss_pred             eEEEEEEecC-Cceee-ee-----ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeec
Confidence            3567777764 33332 22     13468889999999998888888776789999999999999 99999999999985


Q ss_pred             CCCCCCcCCCccccCcccccCCCCCCccchhhHHHH
Q 018244          206 SRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTL  241 (359)
Q Consensus       206 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~i  241 (359)
                      ...... ......--|-.+. +.-+..-+||-+--.
T Consensus       371 ~~~q~~-isy~rldhp~lF~-G~dd~QFeIYrlMr~  404 (488)
T COG5072         371 SYSQGI-ISYNRLDHPDLFN-GVDDYQFEIYRLMRR  404 (488)
T ss_pred             ccCCce-eeccccCchhhhc-CccceeeeHHHHHHH
Confidence            443322 1112233344444 333556677764433

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=96.72  E-value=0.025  Score=51.60  Aligned_cols=139  Identities=17%  Similarity=0.244  Sum_probs=81.8

Q ss_pred             cccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCccccc------c----cceeeeCCcceEE
Q 018244           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLAN------L----LGCCCEGDERLLV  131 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~------~----~~~~~~~~~~~lv  131 (359)
                      ...|.+ .-..||+....+|.. ++|+....  ....++..|+..|..|.-.+|.-      .    +.....+...+-+
T Consensus        31 ~~~l~s-~eN~~f~~~~~~g~~-iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~l  106 (331)
T COG2334          31 LRGLNS-EENSNFRVQTEDGRY-ILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAAL  106 (331)
T ss_pred             cccccc-ccCceEEEEecCCCe-EEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEE
Confidence            334444 456799999877765 88888765  33456677888888774322211      1    1111112367788


Q ss_pred             EecCCCCCHhh-hh------------------hcCC------CCCCCHHH-------------HHHHHHHHHHHHHHhhc
Q 018244          132 AEYMPNDTLAK-HL------------------FHWE------TQPMKWAM-------------RLRVALHIAEALEYCTS  173 (359)
Q Consensus       132 ~e~~~~gsL~~-~l------------------~~~~------~~~l~~~~-------------~~~i~~qi~~~L~~LH~  173 (359)
                      ++|++|..+.. .-                  +...      .....|..             -.....++...+..+..
T Consensus       107 f~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~  186 (331)
T COG2334         107 FEYLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLA  186 (331)
T ss_pred             EEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHh
Confidence            99999877762 11                  0000      01223320             01123334444444433


Q ss_pred             C------C-C--cccccCCCCCeeeCCCCC-eEEeccCCcc
Q 018244          174 K------E-R--ALYHDLNAYRIVFDDDVN-PRLSCFGLMK  204 (359)
Q Consensus       174 ~------~-~--ivH~Dikp~NIll~~~~~-~kl~DFg~a~  204 (359)
                      .      . +  +||+|+.|.||+++.+.. ..++||+.+.
T Consensus       187 ~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         187 RLPAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             hchhhCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence            1      2 3  899999999999998875 9999999764

>PRK12396 5-methylribose kinase; Reviewed

Probab=96.61  E-value=0.015  Score=54.02  Aligned_cols=74  Identities=14%  Similarity=0.096  Sum_probs=48.8

Q ss_pred             cccCCCCCCcEEEEEEeCC-CcEEEEEEeCC-----CC-CchHHHHHHHHHHHhcCC--Ccc-cccccceeeeCCcceEE
Q 018244           62 VSEHGEKAPNVVYKGKLEN-QFRIAVKRFNR-----SA-WPDARQFLEEARAVGQLR--NRR-LANLLGCCCEGDERLLV  131 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~-----~~-~~~~~~~~~e~~~l~~l~--h~n-iv~~~~~~~~~~~~~lv  131 (359)
                      +..||.|.-..||++...+ +..|+||.-..     .+ .-..++..-|.++|+...  .|. +++++.  .+++...+|
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~--~D~e~~~~v  111 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYL--FDSVMNCCV  111 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEE--ECcHHhhHH
Confidence            6678999999999999743 56899997532     11 122456667888888763  343 444443  345567788


Q ss_pred             EecCCC
Q 018244          132 AEYMPN  137 (359)
Q Consensus       132 ~e~~~~  137 (359)
                      ||+++.
T Consensus       112 MEdL~~  117 (409)
T PRK12396        112 MEDLSD  117 (409)
T ss_pred             HHhCcc
Confidence            998854

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=96.57  E-value=0.016  Score=53.13  Aligned_cols=138  Identities=17%  Similarity=0.179  Sum_probs=77.2

Q ss_pred             ccCCCCCCcEEEEEEeCC----CcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCccc-ccccceeeeCCcceEEEecCCC
Q 018244           63 SEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLVAEYMPN  137 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~  137 (359)
                      +.+..|-...+|+....+    +..|.+|+....... .-.-.+|..+++.+..-++ .++++++..   . +|.+|+++
T Consensus        20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~-~IdR~~E~~il~~l~~~gl~P~~l~~~~~---G-~i~~fi~g   94 (330)
T PLN02421         20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDY-VIDRERELQAIKYLSAAGFGAKLLGVFGN---G-MIQSFINA   94 (330)
T ss_pred             EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCe-EechHHHHHHHHHHHhcCCCCceeEEeCC---c-EeehhhcC
Confidence            334456667899887533    237889987654322 1123568888888865444 345555422   1 58999877


Q ss_pred             CCHhhh--------------hh---cCC---CC-CCCHHHHHHHHHHH-------------------------HHHHHHh
Q 018244          138 DTLAKH--------------LF---HWE---TQ-PMKWAMRLRVALHI-------------------------AEALEYC  171 (359)
Q Consensus       138 gsL~~~--------------l~---~~~---~~-~l~~~~~~~i~~qi-------------------------~~~L~~L  171 (359)
                      .+|...              +.   ...   .. .--+..+..+..++                         +..+..+
T Consensus        95 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~  174 (330)
T PLN02421         95 RTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEI  174 (330)
T ss_pred             CCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHH
Confidence            654221              10   000   00 11233333333222                         1111112


Q ss_pred             h-cC---CCcccccCCCCCeeeCC-CCCeEEeccCCccc
Q 018244          172 T-SK---ERALYHDLNAYRIVFDD-DVNPRLSCFGLMKN  205 (359)
Q Consensus       172 H-~~---~~ivH~Dikp~NIll~~-~~~~kl~DFg~a~~  205 (359)
                      . ..   .-++|.|+.+.|||+++ ++.++++||..|..
T Consensus       175 ~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~  213 (330)
T PLN02421        175 TDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY  213 (330)
T ss_pred             hccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence            1 11   13699999999999974 57899999998754

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=96.51  E-value=0.021  Score=51.94  Aligned_cols=31  Identities=10%  Similarity=0.076  Sum_probs=27.9

Q ss_pred             CCcccccCCCCCeeeCCCCCeEEeccCCccc
Q 018244          175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (359)
Q Consensus       175 ~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~  205 (359)
                      .+++|+|+.++|||+++++.+.++||..+..
T Consensus       196 ~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~  226 (309)
T TIGR02904       196 TVLVHGKLSLSHFLYDETRGGYFINFEKASF  226 (309)
T ss_pred             eeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence            4799999999999999999999999998754

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PRK11768 serine/threonine protein kinase; Provisional

Probab=96.22  E-value=0.076  Score=48.65  Aligned_cols=70  Identities=20%  Similarity=0.108  Sum_probs=43.6

Q ss_pred             CCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcc--ccccc---c--eeeeCCcceEEEecCCCCC
Q 018244           69 APNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANLL---G--CCCEGDERLLVAEYMPNDT  139 (359)
Q Consensus        69 ~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~---~--~~~~~~~~~lv~e~~~~gs  139 (359)
                      .-..||+....++..+++|+..... .....+..|++.+..|....  ++...   |  ....++..+.++++++|..
T Consensus        37 ~eN~vy~v~~~~~~~~vlKv~r~~~-~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~~  113 (325)
T PRK11768         37 YENRVYQFGDEDGRRVVAKFYRPER-WSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGGRA  113 (325)
T ss_pred             ccceEEEEecCCCCEEEEEEcCccc-CCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCCCC
Confidence            3467999998778889999876433 23456677888777763221  22211   1  1222456778899987753

>PRK06148 hypothetical protein; Provisional

Probab=96.08  E-value=0.13  Score=54.53  Aligned_cols=149  Identities=17%  Similarity=0.225  Sum_probs=81.7

Q ss_pred             cCCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-------Cccccccc-cee---
Q 018244           54 SGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-------NRRLANLL-GCC---  122 (359)
Q Consensus        54 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-------h~niv~~~-~~~---  122 (359)
                      ..|.....+..|+. ..-.+|+....+|..+++|+.....  .......|.++|..|.       -|.++.-. |-.   
T Consensus        22 ~~ygl~~~~~~L~s-~~d~nf~v~~~~g~~yVLKi~~~~~--~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~   98 (1013)
T PRK06148         22 QHFGISATATPLDG-ERDLNFRLTTDDGADYILKIVNPSE--PRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLAS   98 (1013)
T ss_pred             HHcCCceEEeecCC-cCCceEEEEeCCCCeEEEEEcCCcc--chhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEE
Confidence            33433334456654 4688999988788889999998643  2233444555665442       23333321 111   


Q ss_pred             -ee-CC--cceEEEecCCCCCHhhhhh---------------------cCC----CCCCCHHH-----------------
Q 018244          123 -CE-GD--ERLLVAEYMPNDTLAKHLF---------------------HWE----TQPMKWAM-----------------  156 (359)
Q Consensus       123 -~~-~~--~~~lv~e~~~~gsL~~~l~---------------------~~~----~~~l~~~~-----------------  156 (359)
                       .. .+  ..+-+++|++|..+.+...                     ...    ...+.|..                 
T Consensus        99 v~~~~G~~~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~  178 (1013)
T PRK06148         99 AQDPDGEPRLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPE  178 (1013)
T ss_pred             eecCCCceEEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHH
Confidence             11 11  3567899999877654110                     000    11122221                 


Q ss_pred             HHHHHHHHHHHHH-----HhhcC-CCcccccCCCCCeeeCCCC--CeE-EeccCCccc
Q 018244          157 RLRVALHIAEALE-----YCTSK-ERALYHDLNAYRIVFDDDV--NPR-LSCFGLMKN  205 (359)
Q Consensus       157 ~~~i~~qi~~~L~-----~LH~~-~~ivH~Dikp~NIll~~~~--~~k-l~DFg~a~~  205 (359)
                      ...++.+++..+.     .+... .++||.|+++.|||++.++  .+. |+|||.+..
T Consensus       179 ~r~~l~~~~~~~~~~v~p~l~~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        179 DRALVERFLARFERNVAPRLAALPAQVIHNDANDYNILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence            1222233333222     12111 3799999999999999775  555 999998654

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.96  E-value=0.11  Score=44.56  Aligned_cols=73  Identities=21%  Similarity=0.236  Sum_probs=48.6

Q ss_pred             CCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC---CcccccccceeeeCCcceEEEecCCCCCHh
Q 018244           65 HGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLLVAEYMPNDTLA  141 (359)
Q Consensus        65 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~gsL~  141 (359)
                      +.-|..-..|.... +...+-||+-...   ....|..|+.-|..|.   .-++.+++.+....++.|+|+||++.+.+.
T Consensus        24 v~gG~inea~~v~d-g~~~~FvK~n~~~---~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d   99 (286)
T COG3001          24 VSGGDINEAWRLRD-GTDPFFVKCNQRE---QLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPLD   99 (286)
T ss_pred             cCCccccceeEeec-CCcceEEEecchh---hHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence            34454444455443 3456888876543   2456777887777774   345777788888889999999999875444

>PTZ00384 choline kinase; Provisional

Probab=95.37  E-value=0.11  Score=48.57  Aligned_cols=76  Identities=12%  Similarity=0.180  Sum_probs=44.8

Q ss_pred             ccccCCCCCCcEEEEEEeCCC--c-----EEEEEEeCCCCCchHHHHHHHHHHHhcCCCccc-ccccceeeeCCcceEEE
Q 018244           61 IVSEHGEKAPNVVYKGKLENQ--F-----RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLVA  132 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~~~~--~-----~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~  132 (359)
                      .++.+..|-.+.+|++...++  .     .|.++...... ...-.-.+|+++++.+...++ .++++.+.    -++|.
T Consensus        54 ~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~-~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~----~g~l~  128 (383)
T PTZ00384         54 EIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYN-SLVIDNDLQYNIAKLLGDNNFGPKIIGRFG----DFTIQ  128 (383)
T ss_pred             EEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCC-ceEeccHHHHHHHHHHHhCCCCCeEEEecC----CEEEE
Confidence            344555687889999975432  1     24444332211 111123568899999865544 44555553    36999


Q ss_pred             ecCCCCCHh
Q 018244          133 EYMPNDTLA  141 (359)
Q Consensus       133 e~~~~gsL~  141 (359)
                      ||++|.+|.
T Consensus       129 efIeGr~l~  137 (383)
T PTZ00384        129 EWVEGNTMG  137 (383)
T ss_pred             EEeccccCC
Confidence            999987654

>PHA03111 Ser/Thr kinase; Provisional

Probab=94.78  E-value=0.033  Score=50.12  Aligned_cols=40  Identities=20%  Similarity=0.014  Sum_probs=29.5

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcC---CCcccccCCCCCeeeCCC
Q 018244          153 KWAMRLRVALHIAEALEYCTSK---ERALYHDLNAYRIVFDDD  192 (359)
Q Consensus       153 ~~~~~~~i~~qi~~~L~~LH~~---~~ivH~Dikp~NIll~~~  192 (359)
                      -.+-+..++.||+.-.-.+-..   .+.+|-||||+|||+-+.
T Consensus       277 ~~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds  319 (444)
T PHA03111        277 LVEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDS  319 (444)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecC
Confidence            3466788999998766444332   367999999999999544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	359
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		1e-25
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		2e-25
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		3e-20
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		4e-20
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		5e-20
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		5e-19
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-18
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		4e-18
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		7e-14
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		9e-14
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		9e-14
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		9e-14
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		1e-13
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		1e-13
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		1e-13
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		6e-13
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		6e-13
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		9e-13
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		9e-13
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		1e-12
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		1e-12
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-12
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		3e-12
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		3e-12
2pl0_A	289	Lck Bound To Imatinib Length = 289		4e-12
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		4e-12
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		4e-12
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		4e-12
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		4e-12
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		4e-12
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		4e-12
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		5e-12
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		5e-12
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		5e-12
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		5e-12
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		5e-12
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		5e-12
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		7e-12
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		8e-12
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		8e-12
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		1e-11
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		1e-11
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		2e-11
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		2e-11
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		2e-11
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		2e-11
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		2e-11
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		2e-11
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		3e-11
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		3e-11
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		4e-11
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		4e-11
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		5e-11
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		6e-11
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-10
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-10
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		2e-10
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-10
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-10
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		2e-10
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		2e-10
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		2e-10
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		3e-10
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		3e-10
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		3e-10
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		3e-10
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		4e-10
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		5e-10
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		5e-10
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		7e-10
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		7e-10
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		7e-10
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		7e-10
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		7e-10
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		8e-10
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		9e-10
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		9e-10
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		1e-09
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		1e-09
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		1e-09
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		1e-09
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		1e-09
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		1e-09
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		1e-09
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-09
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-09
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-09
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		2e-09
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-09
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		2e-09
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		2e-09
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		2e-09
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		2e-09
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		2e-09
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-09
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-09
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		2e-09
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		2e-09
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		2e-09
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		2e-09
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		2e-09
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		2e-09
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		3e-09
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		3e-09
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		4e-09
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		4e-09
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		4e-09
3a4o_X	286	Lyn Kinase Domain Length = 286		4e-09
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		4e-09
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		5e-09
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		5e-09
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		7e-09
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		1e-08
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		1e-08
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		1e-08
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		1e-08
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		1e-08
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		1e-08
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		1e-08
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		1e-08
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		1e-08
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		3e-08
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		5e-08
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		8e-08
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		1e-07
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		1e-07
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		2e-07
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		3e-07
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		4e-07
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		8e-07
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		8e-07
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		9e-07
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		9e-07
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		9e-07
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		9e-07
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		9e-07
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		9e-07
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		9e-07
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		9e-07
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		9e-07
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		1e-06
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		1e-06
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		1e-06
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		1e-06
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		1e-06
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		1e-06
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		1e-06
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		1e-06
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		2e-06
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		2e-06
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-06
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		2e-06
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		2e-06
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-06
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		2e-06
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		2e-06
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		2e-06
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		2e-06
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		2e-06
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-06
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-06
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		2e-06
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		2e-06
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		3e-06
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		3e-06
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		3e-06
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		3e-06
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		4e-06
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		4e-06
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		4e-06
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		5e-06
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		5e-06
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		5e-06
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		5e-06
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		5e-06
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		5e-06
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		5e-06
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		5e-06
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		6e-06
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		6e-06
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		6e-06
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		7e-06
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		8e-06
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		9e-06
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		9e-06
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		9e-06
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		9e-06
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		9e-06
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		9e-06
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		9e-06
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		1e-05
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		1e-05
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		1e-05
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		1e-05
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		1e-05
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-05
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		1e-05
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		1e-05
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		2e-05
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		2e-05
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		2e-05
3b2t_A	311	Structure Of Phosphotransferase Length = 311		2e-05
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		2e-05
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		2e-05
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		2e-05
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		2e-05
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		2e-05
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-05
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		2e-05
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		2e-05
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		3e-05
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		3e-05
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		3e-05
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-05
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		3e-05
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		3e-05
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		3e-05
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		3e-05
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		3e-05
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-05
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		3e-05
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		4e-05
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		4e-05
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		4e-05
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		5e-05
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		5e-05
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		8e-05
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		8e-05
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		9e-05
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		9e-05
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		9e-05
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		1e-04
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-04
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		1e-04
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		1e-04
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		1e-04
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-04
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		1e-04
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		1e-04
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		1e-04
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-04
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-04
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		2e-04
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		2e-04
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		2e-04
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-04
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		2e-04
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		2e-04
1fvr_A	327	Tie2 Kinase Domain Length = 327		4e-04
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		4e-04
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		4e-04
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		5e-04
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		5e-04
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		5e-04
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		6e-04
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		7e-04
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		8e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 146/308 (47%), Gaps = 27/308 (8%)
Query: 26  DVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIA 85
           DV  EE P V ++     +S+  L+ A+  F+ +NI+   G      VYKG+L +   +A
Sbjct: 11  DVPAEEDPEV-HLGQLKRFSLRELQVASDNFSNKNIL---GRGGFGKVYKGRLADGTLVA 66
Query: 86  VKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL 144
           VKR           QF  E   +    +R L  L G C    ERLLV  YM N ++A  L
Sbjct: 67  VKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL 126
Query: 145 FHW-ETQP-MKWAMRLRVALHIAEALEYCTS--KERALYHDLNAYRIVFDDDVNPRLSCF 200
               E+QP + W  R R+AL  A  L Y       + ++ D+ A  I+ D++    +  F
Sbjct: 127 RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 186
Query: 201 GLMK--NSRDGR---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI---- 251
           GL K  + +D     +    +    PEYL TG+ + ++ ++ +G +LL+L++G+      
Sbjct: 187 GLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLA 246
Query: 252 -----PPSHALD----LIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
                     LD    L++++ ++ L D  L+G +  +E  +L+++A  C Q  P ERP 
Sbjct: 247 RLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPK 306
Query: 303 PRSLVTAL 310
              +V  L
Sbjct: 307 MSEVVRML 314

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 145/308 (47%), Gaps = 27/308 (8%)
Query: 26  DVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIA 85
           DV  EE P V ++     +S+  L+ A+  F  +NI+   G      VYKG+L +   +A
Sbjct: 3   DVPAEEDPEV-HLGQLKRFSLRELQVASDNFXNKNIL---GRGGFGKVYKGRLADGXLVA 58
Query: 86  VKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL 144
           VKR           QF  E   +    +R L  L G C    ERLLV  YM N ++A  L
Sbjct: 59  VKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL 118
Query: 145 FHW-ETQP-MKWAMRLRVALHIAEALEYCTS--KERALYHDLNAYRIVFDDDVNPRLSCF 200
               E+QP + W  R R+AL  A  L Y       + ++ D+ A  I+ D++    +  F
Sbjct: 119 RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 178
Query: 201 GLMK--NSRDGR---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI---- 251
           GL K  + +D     +    +    PEYL TG+ + ++ ++ +G +LL+L++G+      
Sbjct: 179 GLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLA 238
Query: 252 -----PPSHALD----LIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
                     LD    L++++ ++ L D  L+G +  +E  +L+++A  C Q  P ERP 
Sbjct: 239 RLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPK 298
Query: 303 PRSLVTAL 310
              +V  L
Sbjct: 299 MSEVVRML 306

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 140/302 (46%), Gaps = 52/302 (17%)
Query: 41  FCEYSIETLRTATSGFAMENIV---SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD- 96
           F  +S   L+  T+ F    I    ++ GE    VVYKG + N   +AVK+   +A  D 
Sbjct: 12  FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKL--AAMVDI 68
Query: 97  -----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE-TQ 150
                 +QF +E + + + ++  L  LLG   +GD+  LV  YMPN +L   L   + T 
Sbjct: 69  TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 151 PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208
           P+ W MR ++A   A  + +   +   ++ D+ +  I+ D+    ++S FGL + S    
Sbjct: 129 PLSWHMRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 209 -----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-----KHIPPSHAL- 257
                 R   T  A+  PE LR G +TP+S +YSFG +LL++++G     +H  P   L 
Sbjct: 188 QTVMXSRIVGTT-AYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 245
Query: 258 -------------DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 304
                        D I D+ +     + +E  +S         +AS+CL  +  +RP+ +
Sbjct: 246 IKEEIEDEEKTIEDYI-DKKMNDADSTSVEAMYS---------VASQCLHEKKNKRPDIK 295
Query: 305 SL 306
            +
Sbjct: 296 KV 297

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 140/302 (46%), Gaps = 52/302 (17%)
Query: 41  FCEYSIETLRTATSGFAMENIV---SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD- 96
           F  +S   L+  T+ F    I    ++ GE    VVYKG + N   +AVK+   +A  D 
Sbjct: 12  FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKL--AAMVDI 68
Query: 97  -----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE-TQ 150
                 +QF +E + + + ++  L  LLG   +GD+  LV  YMPN +L   L   + T 
Sbjct: 69  TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 151 PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208
           P+ W MR ++A   A  + +   +   ++ D+ +  I+ D+    ++S FGL + S    
Sbjct: 129 PLSWHMRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 209 -----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-----KHIPPSHAL- 257
                 R   T  A+  PE LR G +TP+S +YSFG +LL++++G     +H  P   L 
Sbjct: 188 QTVMXXRIVGTT-AYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 245
Query: 258 -------------DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 304
                        D I D+ +     + +E  +S         +AS+CL  +  +RP+ +
Sbjct: 246 IKEEIEDEEKTIEDYI-DKKMNDADSTSVEAMYS---------VASQCLHEKKNKRPDIK 295
Query: 305 SL 306
            +
Sbjct: 296 KV 297

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 140/302 (46%), Gaps = 52/302 (17%)
Query: 41  FCEYSIETLRTATSGFAMENIV---SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD- 96
           F  +S   L+  T+ F    I    ++ GE    VVYKG + N   +AVK+   +A  D 
Sbjct: 6   FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKL--AAMVDI 62
Query: 97  -----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE-TQ 150
                 +QF +E + + + ++  L  LLG   +GD+  LV  YMPN +L   L   + T 
Sbjct: 63  TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 122
Query: 151 PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208
           P+ W MR ++A   A  + +   +   ++ D+ +  I+ D+    ++S FGL + S    
Sbjct: 123 PLSWHMRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 209 -----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-----KHIPPSHAL- 257
                 R   T  A+  PE LR G +TP+S +YSFG +LL++++G     +H  P   L 
Sbjct: 182 QXVMXXRIVGTT-AYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 239
Query: 258 -------------DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 304
                        D I D+ +     + +E  +S         +AS+CL  +  +RP+ +
Sbjct: 240 IKEEIEDEEKTIEDYI-DKKMNDADSTSVEAMYS---------VASQCLHEKKNKRPDIK 289
Query: 305 SL 306
            +
Sbjct: 290 KV 291

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 91.7 bits (226), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 14/207 (6%)
Query: 49  LRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVG 108
           L  AT+ F  + ++   G      VYKG L +  ++A+KR    +     +F  E   + 
Sbjct: 34  LEEATNNFDHKFLI---GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 109 QLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAE 166
             R+  L +L+G C E +E +L+ +YM N  L +HL+  +  T  M W  RL + +  A 
Sbjct: 91  FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 167 ALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD-GRSY-----STNLAFT 219
            L Y  +  RA+ H D+ +  I+ D++  P+++ FG+ K   + G+++        L + 
Sbjct: 151 GLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLL 246
            PEY   GR+T +S +YSFG +L ++L
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVL 235

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 49  LRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVG 108
           L  AT+ F  + ++   G      VYKG L +  ++A+KR    +     +F  E   + 
Sbjct: 34  LEEATNNFDHKFLI---GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 109 QLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAE 166
             R+  L +L+G C E +E +L+ +YM N  L +HL+  +  T  M W  RL + +  A 
Sbjct: 91  FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 167 ALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAFT 219
            L Y  +  RA+ H D+ +  I+ D++  P+++ FG+ K   +             L + 
Sbjct: 151 GLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLL 246
            PEY   GR+T +S +YSFG +L ++L
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVL 235

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 136/302 (45%), Gaps = 52/302 (17%)
Query: 41  FCEYSIETLRTATSGFAMENIV---SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD- 96
           F  +S   L+  T+ F    I    ++ GE    VVYKG + N   +AVK+   +A  D 
Sbjct: 3   FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNT-TVAVKKL--AAMVDI 59
Query: 97  -----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE-TQ 150
                 +QF +E +   + ++  L  LLG   +GD+  LV  Y PN +L   L   + T 
Sbjct: 60  TTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP 119
Query: 151 PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208
           P+ W  R ++A   A  + +   +   ++ D+ +  I+ D+    ++S FGL + S    
Sbjct: 120 PLSWHXRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 209 -----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-----KHIPPSHAL- 257
                 R   T  A+  PE LR G +TP+S +YSFG +LL++++G     +H  P   L 
Sbjct: 179 QXVXXSRIVGTT-AYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 236
Query: 258 -------------DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 304
                        D I D+       + +E  +S         +AS+CL  +  +RP+ +
Sbjct: 237 IKEEIEDEEKTIEDYI-DKKXNDADSTSVEAXYS---------VASQCLHEKKNKRPDIK 286
Query: 305 SL 306
            +
Sbjct: 287 KV 288

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 74.7 bits (182), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             + E G     VV  GK   Q+ +A+K     +  +  +F+EEA+ +  L + +L  L 
Sbjct: 12  TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 70
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C +     ++ EYM N  L  +L      ++TQ +     L +   + EA+EY  SK+
Sbjct: 71  GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 125
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVT 230
             L+ DL A   + +D    ++S FGL +   D    S+      + ++PPE L   + +
Sbjct: 126 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFS 184
Query: 231 PESVMYSFGTLLLDLLSGKHIP 252
            +S +++FG L+ ++ S   +P
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMP 206

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             + E G     VV  GK   Q+ +A+K     +  +  +F+EEA+ +  L + +L  L 
Sbjct: 11  TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 69
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C +     ++ EYM N  L  +L      ++TQ +     L +   + EA+EY  SK+
Sbjct: 70  GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 124
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA------FTPPEYLRTGRV 229
             L+ DL A   + +D    ++S FGL +   D   Y++++       ++PPE L   + 
Sbjct: 125 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKF 182
Query: 230 TPESVMYSFGTLLLDLLSGKHIP 252
           + +S +++FG L+ ++ S   +P
Sbjct: 183 SSKSDIWAFGVLMWEIYSLGKMP 205

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             + E G     VV  GK   Q+ +A+K     +  +  +F+EEA+ +  L + +L  L 
Sbjct: 27  TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLY 85
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C +     ++ EYM N  L  +L      ++TQ +     L +   + EA+EY  SK+
Sbjct: 86  GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 140
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVT 230
             L+ DL A   + +D    ++S FGL +   D    S+      + ++PPE L   + +
Sbjct: 141 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 231 PESVMYSFGTLLLDLLSGKHIP 252
            +S +++FG L+ ++ S   +P
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMP 221

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             + E G     VV  GK   Q+ +A+K     +  +  +F+EEA+ +  L + +L  L 
Sbjct: 18  TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLY 76
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C +     ++ EYM N  L  +L      ++TQ +     L +   + EA+EY  SK+
Sbjct: 77  GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 131
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA------FTPPEYLRTGRV 229
             L+ DL A   + +D    ++S FGL +   D   Y++++       ++PPE L   + 
Sbjct: 132 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKF 189
Query: 230 TPESVMYSFGTLLLDLLSGKHIP 252
           + +S +++FG L+ ++ S   +P
Sbjct: 190 SSKSDIWAFGVLMWEIYSLGKMP 212

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             + E G     VV  GK   Q+ +A+K     +  +  +F+EEA+ +  L + +L  L 
Sbjct: 7   TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 65
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C +     ++ EYM N  L  +L      ++TQ +     L +   + EA+EY  SK+
Sbjct: 66  GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 120
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA------FTPPEYLRTGRV 229
             L+ DL A   + +D    ++S FGL +   D   Y++++       ++PPE L   + 
Sbjct: 121 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKF 178
Query: 230 TPESVMYSFGTLLLDLLSGKHIP 252
           + +S +++FG L+ ++ S   +P
Sbjct: 179 SSKSDIWAFGVLMWEIYSLGKMP 201

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             + E G     VV  GK   Q+ +A+K     +  +  +F+EEA+ +  L + +L  L 
Sbjct: 27  TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLY 85
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C +     ++ EYM N  L  +L      ++TQ +     L +   + EA+EY  SK+
Sbjct: 86  GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 140
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA------FTPPEYLRTGRV 229
             L+ DL A   + +D    ++S FGL +   D   Y++++       ++PPE L   + 
Sbjct: 141 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKF 198
Query: 230 TPESVMYSFGTLLLDLLSGKHIP 252
           + +S +++FG L+ ++ S   +P
Sbjct: 199 SSKSDIWAFGVLMWEIYSLGKMP 221

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             + E G     VV  GK   Q+ +A+K     +  +  +F+EEA+ +  L + +L  L 
Sbjct: 12  TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 70
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C +     ++ EYM N  L  +L      ++TQ +     L +   + EA+EY  SK+
Sbjct: 71  GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 125
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA------FTPPEYLRTGRV 229
             L+ DL A   + +D    ++S FGL +   D   Y++++       ++PPE L   + 
Sbjct: 126 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKF 183
Query: 230 TPESVMYSFGTLLLDLLSGKHIP 252
           + +S +++FG L+ ++ S   +P
Sbjct: 184 SSKSDIWAFGVLMWEIYSLGKMP 206

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 117/276 (42%), Gaps = 36/276 (13%)
Query: 61  IVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNR 113
           ++ E G+ +  +VY+G      K E + R+AVK  N SA    R +FL EA  +      
Sbjct: 18  LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIA 165
            +  LLG   +G   L+V E M +  L  +L     +        P      +++A  IA
Sbjct: 78  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 166 EALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFT 219
           + + Y  +K + ++ DL A   +   D   ++  FG+ ++       R G      + + 
Sbjct: 138 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLE 274
            PE L+ G  T  S M+SFG +L ++ S    P         L  + D       D+C E
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 256
Query: 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                   T+L+R+   C Q+ P+ RP    +V  L
Sbjct: 257 ------RVTDLMRM---CWQFNPKMRPTFLEIVNLL 283

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 117/276 (42%), Gaps = 36/276 (13%)
Query: 61  IVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNR 113
           ++ E G+ +  +VY+G      K E + R+AVK  N SA    R +FL EA  +      
Sbjct: 21  LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIA 165
            +  LLG   +G   L+V E M +  L  +L     +        P      +++A  IA
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 166 EALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFT 219
           + + Y  +K + ++ DL A   +   D   ++  FG+ ++       R G      + + 
Sbjct: 141 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLE 274
            PE L+ G  T  S M+SFG +L ++ S    P         L  + D       D+C E
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                   T+L+R+   C Q+ P+ RP    +V  L
Sbjct: 260 ------RVTDLMRM---CWQFNPKMRPTFLEIVNLL 286

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 117/276 (42%), Gaps = 36/276 (13%)
Query: 61  IVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNR 113
           ++ E G+ +  +VY+G      K E + R+AVK  N SA    R +FL EA  +      
Sbjct: 21  LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIA 165
            +  LLG   +G   L+V E M +  L  +L     +        P      +++A  IA
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 166 EALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFT 219
           + + Y  +K + ++ DL A   +   D   ++  FG+ ++       R G      + + 
Sbjct: 141 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLE 274
            PE L+ G  T  S M+SFG +L ++ S    P         L  + D       D+C E
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                   T+L+R+   C Q+ P+ RP    +V  L
Sbjct: 260 ------RVTDLMRM---CWQFNPKMRPTFLEIVNLL 286

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 117/276 (42%), Gaps = 36/276 (13%)
Query: 61  IVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNR 113
           ++ E G+ +  +VY+G      K E + R+AVK  N SA    R +FL EA  +      
Sbjct: 21  LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIA 165
            +  LLG   +G   L+V E M +  L  +L     +        P      +++A  IA
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 166 EALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFT 219
           + + Y  +K + ++ DL A   +   D   ++  FG+ ++       R G      + + 
Sbjct: 141 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLE 274
            PE L+ G  T  S M+SFG +L ++ S    P         L  + D       D+C E
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                   T+L+R+   C Q+ P+ RP    +V  L
Sbjct: 260 ------RVTDLMRM---CWQFNPKMRPTFLEIVNLL 286

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 117/276 (42%), Gaps = 36/276 (13%)
Query: 61  IVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNR 113
           ++ E G+ +  +VY+G      K E + R+AVK  N SA    R +FL EA  +      
Sbjct: 20  LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIA 165
            +  LLG   +G   L+V E M +  L  +L     +        P      +++A  IA
Sbjct: 80  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 166 EALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFT 219
           + + Y  +K + ++ DL A   +   D   ++  FG+ ++       R G      + + 
Sbjct: 140 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLE 274
            PE L+ G  T  S M+SFG +L ++ S    P         L  + D       D+C E
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 258
Query: 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                   T+L+R+   C Q+ P+ RP    +V  L
Sbjct: 259 ------RVTDLMRM---CWQFNPKMRPTFLEIVNLL 285

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 116/276 (42%), Gaps = 36/276 (13%)
Query: 61  IVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNR 113
           ++ E G+ +  +VY+G      K E + R+AVK  N SA    R +FL EA  +      
Sbjct: 21  LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIA 165
            +  LLG   +G   L+V E M +  L  +L     +        P      +++A  IA
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 166 EALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFT 219
           + + Y  +K + ++ DL A   +   D   ++  FG+ ++       R G      + + 
Sbjct: 141 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLE 274
            PE L+ G  T  S M+SFG +L ++ S    P         L  + D       D+C E
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                   T+L+R+   C Q+ P  RP    +V  L
Sbjct: 260 ------RVTDLMRM---CWQFNPNMRPTFLEIVNLL 286

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 115/258 (44%), Gaps = 32/258 (12%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 118
            +V   G      V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L
Sbjct: 16  KLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRL 73
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 178
                + +   ++ EYM N +L   L       +     L +A  IAE + +   +ER  
Sbjct: 74  YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNY 130
Query: 179 YH-DLNAYRIVFDDDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVT 230
            H DL A  I+  D ++ +++ FGL +        +R+G  +   + +T PE +  G  T
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP--IKWTAPEAINYGTFT 188
Query: 231 PESVMYSFGTLLLDLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284
            +S ++SFG LL ++++   IP      P    +L R   +    D+C E         E
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------E 238
Query: 285 LVRLASRCLQYEPRERPN 302
           L +L   C +  P +RP 
Sbjct: 239 LYQLMRLCWKERPEDRPT 256

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 37  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 93
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 94  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 151
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 152 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 209
Query: 244 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
           ++++   IP      P    +L R   +    D+C E         EL +L   C +  P
Sbjct: 210 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 259
Query: 298 RERPN 302
            +RP 
Sbjct: 260 EDRPT 264

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 35  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 91
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 92  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 149
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 150 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 207
Query: 244 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
           ++++   IP      P    +L R   +    D+C E         EL +L   C +  P
Sbjct: 208 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 257
Query: 298 RERPN 302
            +RP 
Sbjct: 258 EDRPT 262

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 39  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 95
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 96  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 153
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 154 DTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 211
Query: 244 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
           ++++   IP      P    +L R   +    D+C E         EL +L   C +  P
Sbjct: 212 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 261
Query: 298 RERPN 302
            +RP 
Sbjct: 262 EDRPT 266

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 38  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 94
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 95  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 152
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 153 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 210
Query: 244 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
           ++++   IP      P    +L R   +    D+C E         EL +L   C +  P
Sbjct: 211 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 260
Query: 298 RERPN 302
            +RP 
Sbjct: 261 EDRPT 265

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 29  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 86  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 143
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 144 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 201
Query: 244 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
           ++++   IP      P    +L R   +    D+C E         EL +L   C +  P
Sbjct: 202 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 251
Query: 298 RERPN 302
            +RP 
Sbjct: 252 EDRPT 256

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 35  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 91
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 92  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 149
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 150 DTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 207
Query: 244 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
           ++++   IP      P    +L R   +    D+C E         EL +L   C +  P
Sbjct: 208 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 257
Query: 298 RERPN 302
            +RP 
Sbjct: 258 EDRPT 262

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Query: 83  RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVAEYMPNDTLA 141
           ++AVK     A   A+ FL EA  + QLR+  L  LLG   E    L +V EYM   +L 
Sbjct: 218 KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 275
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L       +     L+ +L + EA+EY       ++ DL A  ++  +D   ++S FG
Sbjct: 276 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFG 334
Query: 202 LMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
           L K +   +      + +T PE LR  + + +S ++SFG LL ++ S   +P
Sbjct: 335 LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 34  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 90
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 91  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 148
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 149 DTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 206
Query: 244 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
           ++++   IP      P    +L R   +    D+C E         EL +L   C +  P
Sbjct: 207 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 256
Query: 298 RERPN 302
            +RP 
Sbjct: 257 EDRPT 261

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 31  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 87
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 88  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 145
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 146 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 203
Query: 244 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
           ++++   IP      P    +L R   +    D+C E         EL +L   C +  P
Sbjct: 204 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 253
Query: 298 RERPN 302
            +RP 
Sbjct: 254 EDRPT 258

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 30  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 86
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 87  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 144
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 145 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 202
Query: 244 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
           ++++   IP      P    +L R   +    D+C E         EL +L   C +  P
Sbjct: 203 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 252
Query: 298 RERPN 302
            +RP 
Sbjct: 253 EDRPT 257

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Query: 83  RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVAEYMPNDTLA 141
           ++AVK     A   A+ FL EA  + QLR+  L  LLG   E    L +V EYM   +L 
Sbjct: 31  KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 88
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L       +     L+ +L + EA+EY       ++ DL A  ++  +D   ++S FG
Sbjct: 89  DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFG 147
Query: 202 LMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
           L K +   +      + +T PE LR  + + +S ++SFG LL ++ S   +P
Sbjct: 148 LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 24  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 80
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 81  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 138
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 139 DTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 196
Query: 244 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
           ++++   IP      P    +L R   +    D+C E         EL +L   C +  P
Sbjct: 197 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 246
Query: 298 RERPN 302
            +RP 
Sbjct: 247 EDRPT 251

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 29  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 86  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 143
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 144 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 201
Query: 244 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
           ++++   IP      P    +L R   +    D+C E         EL +L   C +  P
Sbjct: 202 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 251
Query: 298 RERPN 302
            +RP 
Sbjct: 252 EDRPT 256

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Query: 83  RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVAEYMPNDTLA 141
           ++AVK     A   A+ FL EA  + QLR+  L  LLG   E    L +V EYM   +L 
Sbjct: 46  KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 103
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L       +     L+ +L + EA+EY       ++ DL A  ++  +D   ++S FG
Sbjct: 104 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFG 162
Query: 202 LMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
           L K +   +      + +T PE LR  + + +S ++SFG LL ++ S   +P
Sbjct: 163 LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 29  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 86  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 143
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 144 DTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 201
Query: 244 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
           ++++   IP      P    +L R   +    D+C E         EL +L   C +  P
Sbjct: 202 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 251
Query: 298 RERPN 302
            +RP 
Sbjct: 252 EDRPT 256

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 36/276 (13%)
Query: 61  IVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNR 113
           ++ E G+ +  +VY+G      K E + R+AVK  N SA    R +FL EA  +      
Sbjct: 22  LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIA 165
            +  LLG   +G   L+V E M +  L  +L     +        P      +++A  IA
Sbjct: 82  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 166 EALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFT 219
           + + Y  +K + ++ +L A   +   D   ++  FG+ ++       R G      + + 
Sbjct: 142 DGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLE 274
            PE L+ G  T  S M+SFG +L ++ S    P         L  + D       D+C E
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 260
Query: 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                   T+L+R+   C Q+ P  RP    +V  L
Sbjct: 261 ------RVTDLMRM---CWQFNPNMRPTFLEIVNLL 287

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 36/276 (13%)
Query: 61  IVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNR 113
           ++ E G+ +  +VY+G      K E + R+AVK  N SA    R +FL EA  +      
Sbjct: 21  LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIA 165
            +  LLG   +G   L+V E M +  L  +L     +        P      +++A  IA
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 166 EALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFT 219
           + + Y  +K + ++ +L A   +   D   ++  FG+ ++       R G      + + 
Sbjct: 141 DGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLE 274
            PE L+ G  T  S M+SFG +L ++ S    P         L  + D       D+C E
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                   T+L+R+   C Q+ P  RP    +V  L
Sbjct: 260 ------RVTDLMRM---CWQFNPNMRPTFLEIVNLL 286

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 5/172 (2%)
Query: 83  RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVAEYMPNDTLA 141
           ++AVK     A   A+ FL EA  + QLR+  L  LLG   E    L +V EYM   +L 
Sbjct: 37  KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 94
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L       +     L+ +L + EA+EY       ++ DL A  ++  +D   ++S FG
Sbjct: 95  DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFG 153
Query: 202 LMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
           L K +   +      + +T PE LR    + +S ++SFG LL ++ S   +P
Sbjct: 154 LTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 26  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 86  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 146 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 204
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 277
            L+ G  T  S ++SFG +L ++ +    P         L  + +  +    D+C +  F
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 264
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                 EL+R+   C QY P+ RP+   +++++
Sbjct: 265 ------ELMRM---CWQYNPKMRPSFLEIISSI 288

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 112/244 (45%), Gaps = 32/244 (13%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 25  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 81
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H +L A  I+  
Sbjct: 82  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRNLRAANILVS 139
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 140 DTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 197
Query: 244 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
           ++++   IP      P    +L R   +    D+C E         EL +L   C +  P
Sbjct: 198 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 247
Query: 298 RERP 301
            +RP
Sbjct: 248 EDRP 251

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 19  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 79  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 139 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 277
            L+ G  T  S ++SFG +L ++ +    P         L  + +  +    D+C +  F
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 257
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                 EL+R+   C QY P+ RP+   +++++
Sbjct: 258 ------ELMRM---CWQYNPKMRPSFLEIISSI 281

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 23  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 83  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 143 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 201
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 277
            L+ G  T  S ++SFG +L ++ +    P         L  + +  +    D+C +  F
Sbjct: 202 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 261
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                 EL+R+   C QY P+ RP+   +++++
Sbjct: 262 ------ELMRM---CWQYNPKMRPSFLEIISSI 285

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 26  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 86  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 146 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 204
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 277
            L+ G  T  S ++SFG +L ++ +    P         L  + +  +    D+C +  F
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 264
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                 EL+R+   C QY P+ RP+   +++++
Sbjct: 265 ------ELMRM---CWQYNPKMRPSFLEIISSI 288

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 32  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 92  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 152 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 277
            L+ G  T  S ++SFG +L ++ +    P         L  + +  +    D+C +  F
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 270
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                 EL+R+   C QY P+ RP+   +++++
Sbjct: 271 ------ELMRM---CWQYNPKMRPSFLEIISSI 294

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 25  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 85  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 145 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 277
            L+ G  T  S ++SFG +L ++ +    P         L  + +  +    D+C +  F
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 263
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                 EL+R+   C QY P+ RP+   +++++
Sbjct: 264 ------ELMRM---CWQYNPKMRPSFLEIISSI 287

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 36/273 (13%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 17  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 77  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 137 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 195
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 277
            L+ G  T  S ++SFG +L ++ +    P         L  + +  +    D+C     
Sbjct: 196 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC----- 250
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
             D   EL+R+   C QY P+ RP+   +++++
Sbjct: 251 -PDMLLELMRM---CWQYNPKMRPSFLEIISSI 279

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 25  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 85  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 145 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 277
            L+ G  T  S ++SFG +L ++ +    P         L  + +  +    D+C +  F
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 263
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                 EL+R+   C QY P+ RP+   +++++
Sbjct: 264 ------ELMRM---CWQYNPKMRPSFLEIISSI 287

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 54  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 174 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 232
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 277
            L+ G  T  S ++SFG +L ++ +    P         L  + +  +    D+C +  F
Sbjct: 233 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 292
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                 EL+R+   C QY P+ RP+   +++++
Sbjct: 293 ------ELMRM---CWQYNPKMRPSFLEIISSI 316

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 36/273 (13%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 22  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L              P   +  +++A  IA+ +
Sbjct: 82  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 142 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 200
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 277
            L+ G  T  S ++SFG +L ++ +    P         L  + +  +    D+C +  F
Sbjct: 201 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 260
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                 EL+R+   C QY P+ RP+   +++++
Sbjct: 261 ------ELMRM---CWQYNPKMRPSFLEIISSI 284

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 36/273 (13%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 32  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L              P   +  +++A  IA+ +
Sbjct: 92  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 152 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 277
            L+ G  T  S ++SFG +L ++ +    P         L  + +  +    D+C +  F
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 270
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                 EL+R+   C QY P+ RP+   +++++
Sbjct: 271 ------ELMRM---CWQYNPKMRPSFLEIISSI 294

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 36/273 (13%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 19  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 79  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A      +D   ++  FG+ ++       R G      + +  PE
Sbjct: 139 AYLNAN-KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 277
            L+ G  T  S ++SFG +L ++ +    P         L  + +  +    D+C     
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC----- 252
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
             D   EL+R+   C QY P+ RP+   +++++
Sbjct: 253 -PDMLLELMRM---CWQYNPKMRPSFLEIISSI 281

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 119/260 (45%), Gaps = 24/260 (9%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 27  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 86  TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 144
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +++ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 145 NHLVKVADFGLSR-LMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
Query: 246 LSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
            +    P     PS   +L+         + C E  +      EL+R    C Q+ P +R
Sbjct: 204 ATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDR 254
Query: 301 PNPRSLVTALVTLQKDTEVS 320
           P+   +  A  T+ +++ +S
Sbjct: 255 PSFAEIHQAFETMFQESSIS 274

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 117/261 (44%), Gaps = 26/261 (9%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 27  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 86  TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 144
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           +   +++ FGL +        +  G  +   + +T PE L   + + +S +++FG LL +
Sbjct: 145 NHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWE 202
Query: 245 LLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
           + +    P     PS   +L+         + C E  +      EL+R    C Q+ P +
Sbjct: 203 IATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSD 253
Query: 300 RPNPRSLVTALVTLQKDTEVS 320
           RP+   +  A  T+ +++ +S
Sbjct: 254 RPSFAEIHQAFETMFQESSIS 274

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 117/261 (44%), Gaps = 26/261 (9%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 27  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 86  IEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 144
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           +   +++ FGL +        +  G  +   + +T PE L   + + +S +++FG LL +
Sbjct: 145 NHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWE 202
Query: 245 LLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
           + +    P     PS   +L+         + C E  +      EL+R    C Q+ P +
Sbjct: 203 IATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSD 253
Query: 300 RPNPRSLVTALVTLQKDTEVS 320
           RP+   +  A  T+ +++ +S
Sbjct: 254 RPSFAEIHQAFETMFQESSIS 274

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 121/259 (46%), Gaps = 22/259 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 29  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 88  TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 146
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 301
            +   + P   +DL +   +       LE  +  +  EG   ++  L   C Q+ P +RP
Sbjct: 206 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 302 NPRSLVTALVTLQKDTEVS 320
           +   +  A  T+ +++ +S
Sbjct: 258 SFAEIHQAFETMFQESSIS 276

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 121/259 (46%), Gaps = 22/259 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 31  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 89
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 90  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 148
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 149 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 301
            +   + P   +DL +   +       LE  +  +  EG   ++  L   C Q+ P +RP
Sbjct: 208 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 259
Query: 302 NPRSLVTALVTLQKDTEVS 320
           +   +  A  T+ +++ +S
Sbjct: 260 SFAEIHQAFETMFQESSIS 278

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 121/259 (46%), Gaps = 22/259 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 42  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 100
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 101 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 159
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 160 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 218
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 301
            +   + P   +DL +   +       LE  +  +  EG   ++  L   C Q+ P +RP
Sbjct: 219 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 270
Query: 302 NPRSLVTALVTLQKDTEVS 320
           +   +  A  T+ +++ +S
Sbjct: 271 SFAEIHQAFETMFQESSIS 289

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 121/259 (46%), Gaps = 22/259 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 31  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 89
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 90  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 148
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 149 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 301
            +   + P   +DL +   +       LE  +  +  EG   ++  L   C Q+ P +RP
Sbjct: 208 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 259
Query: 302 NPRSLVTALVTLQKDTEVS 320
           +   +  A  T+ +++ +S
Sbjct: 260 SFAEIHQAFETMFQESSIS 278

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 121/259 (46%), Gaps = 22/259 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 29  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 88  TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 146
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 301
            +   + P   +DL +   +       LE  +  +  EG   ++  L   C Q+ P +RP
Sbjct: 206 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 302 NPRSLVTALVTLQKDTEVS 320
           +   +  A  T+ +++ +S
Sbjct: 258 SFAEIHQAFETMFQESSIS 276

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 121/259 (46%), Gaps = 22/259 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 34  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 93  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 151
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 152 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 301
            +   + P   +DL +   +       LE  +  +  EG   ++  L   C Q+ P +RP
Sbjct: 211 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 302 NPRSLVTALVTLQKDTEVS 320
           +   +  A  T+ +++ +S
Sbjct: 263 SFAEIHQAFETMFQESSIS 281

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 121/259 (46%), Gaps = 22/259 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 34  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 93  TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 151
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 152 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 301
            +   + P   +DL +   +       LE  +  +  EG   ++  L   C Q+ P +RP
Sbjct: 211 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 302 NPRSLVTALVTLQKDTEVS 320
           +   +  A  T+ +++ +S
Sbjct: 263 SFAEIHQAFETMFQESSIS 281

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 112/253 (44%), Gaps = 18/253 (7%)
Query: 73  VYKGKLE-NQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           V+ G+L  +   +AVK    +  PD + +FL+EAR + Q  +  +  L+G C +     +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
           V E +        L   E   ++    L++    A  +EY  SK   ++ DL A   +  
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESK-CCIHRDLAARNCLVT 247
Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           +    ++S FG+ +   DG   ++       + +T PE L  GR + ES ++SFG LL +
Sbjct: 248 EKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
Query: 245 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE--GTELVRLASRCLQYEPRERPN 302
             S    P  +        N QT       G+    E     + RL  +C  YEP +RP+
Sbjct: 308 TFSLGASPYPNL------SNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPS 361
Query: 303 PRSLVTALVTLQK 315
             ++   L +++K
Sbjct: 362 FSTIYQELQSIRK 374

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 121/259 (46%), Gaps = 22/259 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 29  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 88  IEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 146
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 301
            +   + P   +DL +   +       LE  +  +  EG   ++  L   C Q+ P +RP
Sbjct: 206 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 302 NPRSLVTALVTLQKDTEVS 320
           +   +  A  T+ +++ +S
Sbjct: 258 SFAEIHQAFETMFQESSIS 276

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 121/259 (46%), Gaps = 22/259 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 29  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 88  IEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 146
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 301
            +   + P   +DL +   +       LE  +  +  EG   ++  L   C Q+ P +RP
Sbjct: 206 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 302 NPRSLVTALVTLQKDTEVS 320
           +   +  A  T+ +++ +S
Sbjct: 258 SFAEIHQAFETMFQESSIS 276

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 112/253 (44%), Gaps = 18/253 (7%)
Query: 73  VYKGKLE-NQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           V+ G+L  +   +AVK    +  PD + +FL+EAR + Q  +  +  L+G C +     +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
           V E +        L   E   ++    L++    A  +EY  SK   ++ DL A   +  
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESK-CCIHRDLAARNCLVT 247
Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           +    ++S FG+ +   DG   ++       + +T PE L  GR + ES ++SFG LL +
Sbjct: 248 EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
Query: 245 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE--GTELVRLASRCLQYEPRERPN 302
             S    P  +        N QT       G+    E     + RL  +C  YEP +RP+
Sbjct: 308 TFSLGASPYPNL------SNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPS 361
Query: 303 PRSLVTALVTLQK 315
             ++   L +++K
Sbjct: 362 FSTIYQELQSIRK 374

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 120/259 (46%), Gaps = 22/259 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 31  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 89
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 90  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 148
Query: 192 DVNPRLSCFGLMKNSRDGRSYST------NLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+        + +T PE L   + + +S +++FG LL ++
Sbjct: 149 NHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 301
            +   + P   +DL +   +       LE  +  +  EG   ++  L   C Q+ P +RP
Sbjct: 208 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 259
Query: 302 NPRSLVTALVTLQKDTEVS 320
           +   +  A  T+ +++ +S
Sbjct: 260 SFAEIHQAFETMFQESSIS 278

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 120/259 (46%), Gaps = 22/259 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 30  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 88
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 89  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 147
Query: 192 DVNPRLSCFGLMKNSRDGRSYST------NLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+        + +T PE L   + + +S +++FG LL ++
Sbjct: 148 NHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 301
            +   + P   +DL +   +       LE  +  +  EG   ++  L   C Q+ P +RP
Sbjct: 207 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 258
Query: 302 NPRSLVTALVTLQKDTEVS 320
           +   +  A  T+ +++ +S
Sbjct: 259 SFAEIHQAFETMFQESSIS 277

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 283 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 339
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 340 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRAANILVGE 398
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 399 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 456
Query: 245 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
           L +   +P P       LD +           C E          L  L  +C + EP E
Sbjct: 457 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE---------SLHDLMCQCWRKEPEE 507
Query: 300 RPN 302
           RP 
Sbjct: 508 RPT 510

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 24  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIXIV 80
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 81  TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 139
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 140 NLVCKVADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 197
Query: 245 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
           L +   +P P       LD +           C E          L  L  +C + EP E
Sbjct: 198 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 248
Query: 300 RPN 302
           RP 
Sbjct: 249 RPT 251

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 18/237 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+ G      ++A+K   +        FLEEA+ + +L++ +L  L     E +   +V 
Sbjct: 25  VWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE-EPIYIVT 82
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           EYM   +L   L   E + +K    + +A  +A  + Y   +   ++ DL +  I+  + 
Sbjct: 83  EYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI-ERMNYIHRDLRSANILVGNG 141
Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +L
Sbjct: 142 LICKIADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
Query: 246 LSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
           ++   +P P      + +R +    +         D    L  L   C + +P ERP
Sbjct: 200 VTKGRVPYPG-----MNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERP 251

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 28/243 (11%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 257 GEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRAANILVGE 315
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 373
Query: 245 LLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
           L +   +P         LD +           C E          L  L  +C + EP E
Sbjct: 374 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE---------SLHDLMCQCWRKEPEE 424
Query: 300 RPN 302
           RP 
Sbjct: 425 RPT 427

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 27  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 83
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 84  TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 142
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 143 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 200
Query: 245 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
           L +   +P P       LD +           C E          L  L  +C + EP E
Sbjct: 201 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 251
Query: 300 RPN 302
           RP 
Sbjct: 252 RPT 254

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             V E G     +V+ G   N+ ++A+K     A  +   F+EEA  + +L + +L  L 
Sbjct: 10  TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 68
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERA 177
           G C E     LV E+M +  L+ +L    TQ   +A    L + L + E + Y   +   
Sbjct: 69  GVCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYL-EEASV 124
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPE 232
           ++ DL A   +  ++   ++S FG+ +   D +  S+      + +  PE     R + +
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 233 SVMYSFGTLLLDLLSGKHIP 252
           S ++SFG L+ ++ S   IP
Sbjct: 185 SDVWSFGVLMWEVFSEGKIP 204

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 28/243 (11%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRAANILVGE 315
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 373
Query: 245 LLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
           L +   +P         LD +           C E          L  L  +C + EP E
Sbjct: 374 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 424
Query: 300 RPN 302
           RP 
Sbjct: 425 RPT 427

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 28/243 (11%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRAANILVGE 315
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 373
Query: 245 LLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
           L +   +P         LD +           C E          L  L  +C + EP E
Sbjct: 374 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 424
Query: 300 RPN 302
           RP 
Sbjct: 425 RPT 427

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             V E G     +V+ G   N+ ++A+K     A  +   F+EEA  + +L + +L  L 
Sbjct: 11  TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 69
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERA 177
           G C E     LV E+M +  L+ +L    TQ   +A    L + L + E + Y   +   
Sbjct: 70  GVCLEQAPICLVTEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAY-LEEACV 125
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPE 232
           ++ DL A   +  ++   ++S FG+ +   D +  S+      + +  PE     R + +
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 185
Query: 233 SVMYSFGTLLLDLLSGKHIP 252
           S ++SFG L+ ++ S   IP
Sbjct: 186 SDVWSFGVLMWEVFSEGKIP 205

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 119/256 (46%), Gaps = 22/256 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 29  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 88  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 146
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 301
            +   + P   +DL +   +       LE  +  +  EG   ++  L   C Q+ P +RP
Sbjct: 206 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 302 NPRSLVTALVTLQKDT 317
           +   +  A  T+ +++
Sbjct: 258 SFAEIHQAFETMFQES 273

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 34  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 93  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 151
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 152 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 301
            +   + P   +DL +   +       LE  +  +  EG   ++  L   C Q+ P +RP
Sbjct: 211 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 302 NPRSLVTALVTL 313
           +   +  A  T+
Sbjct: 263 SFAEIHQAFETM 274

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 119/256 (46%), Gaps = 22/256 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 33  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 91
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 92  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 150
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 151 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 301
            +   + P   +DL +   +       LE  +  +  EG   ++  L   C Q+ P +RP
Sbjct: 210 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 261
Query: 302 NPRSLVTALVTLQKDT 317
           +   +  A  T+ +++
Sbjct: 262 SFAEIHQAFETMFQES 277

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             V E G     +V+ G   N+ ++A+K     A  +   F+EEA  + +L + +L  L 
Sbjct: 10  TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 68
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERA 177
           G C E     LV E+M +  L+ +L    TQ   +A    L + L + E + Y   +   
Sbjct: 69  GVCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAY-LEEACV 124
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPE 232
           ++ DL A   +  ++   ++S FG+ +   D +  S+      + +  PE     R + +
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 233 SVMYSFGTLLLDLLSGKHIP 252
           S ++SFG L+ ++ S   IP
Sbjct: 185 SDVWSFGVLMWEVFSEGKIP 204

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 28/261 (10%)
Query: 79  ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           +++  +AVK    ++    + F  EA  +  L++  +    G C EGD  ++V EYM + 
Sbjct: 41  QDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 100
Query: 139 TLAKHL--------FHWETQP---MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
            L K L           E  P   +  +  L +A  IA  + Y  S +  ++ DL     
Sbjct: 101 DLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLATRNC 159
Query: 188 VFDDDVNPRLSCFGLMKNS------RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTL 241
           +  +++  ++  FG+ ++       R G      + + PPE +   + T ES ++S G +
Sbjct: 160 LVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV 219
Query: 242 LLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT---ELVRLASRCLQYEPR 298
           L ++ +    P      L  +  I+ +T    +G+      T   E+  L   C Q EP 
Sbjct: 220 LWEIFTYGKQP---WYQLSNNEVIECIT----QGRVLQRPRTCPQEVYELMLGCWQREPH 272
Query: 299 ERPNPRSLVTALVTLQKDTEV 319
            R N + + T L  L K + V
Sbjct: 273 MRKNIKGIHTLLQNLAKASPV 293

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             V E G     +V+ G   N+ ++A+K     A  +   F+EEA  + +L + +L  L 
Sbjct: 8   TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 66
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERA 177
           G C E     LV E+M +  L+ +L    TQ   +A    L + L + E + Y   +   
Sbjct: 67  GVCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAY-LEEACV 122
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPE 232
           ++ DL A   +  ++   ++S FG+ +   D +  S+      + +  PE     R + +
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 182
Query: 233 SVMYSFGTLLLDLLSGKHIP 252
           S ++SFG L+ ++ S   IP
Sbjct: 183 SDVWSFGVLMWEVFSEGKIP 202

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 119/260 (45%), Gaps = 24/260 (9%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 30  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 88
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 89  IEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 147
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           +   +++ FGL +        +  G  +   + +T PE L   + + +S +++FG LL +
Sbjct: 148 NHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWE 205
Query: 245 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRER 300
           + +   + P   +DL +   +       LE  +  +  EG   ++  L   C Q+ P +R
Sbjct: 206 IAT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDR 257
Query: 301 PNPRSLVTALVTLQKDTEVS 320
           P+   +  A  T+ +++ +S
Sbjct: 258 PSFAEIHQAFETMFQESSIS 277

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             V E G     +V+ G   N+ ++A+K     A  +   F+EEA  + +L + +L  L 
Sbjct: 13  TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 71
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERA 177
           G C E     LV E+M +  L+ +L    TQ   +A    L + L + E + Y   +   
Sbjct: 72  GVCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAY-LEEACV 127
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPE 232
           ++ DL A   +  ++   ++S FG+ +   D +  S+      + +  PE     R + +
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 187
Query: 233 SVMYSFGTLLLDLLSGKHIP 252
           S ++SFG L+ ++ S   IP
Sbjct: 188 SDVWSFGVLMWEVFSEGKIP 207

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 29  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 88  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 146
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 301
            +   + P   +DL +   +       LE  +  +  EG   ++  L   C Q+ P +RP
Sbjct: 206 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 302 NPRSLVTALVTL 313
           +   +  A  T+
Sbjct: 258 SFAEIHQAFETM 269

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 121/259 (46%), Gaps = 22/259 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 236 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ +L A   +  +
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRNLAARNCLVGE 353
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 354 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 301
            +   + P   +DL +   +       LE  +  +  EG   ++  L   C Q+ P +RP
Sbjct: 413 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 464
Query: 302 NPRSLVTALVTLQKDTEVS 320
           +   +  A  T+ +++ +S
Sbjct: 465 SFAEIHQAFETMFQESSIS 483

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 34  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 91  TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 208 LTTKGRVP 215

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 109/240 (45%), Gaps = 19/240 (7%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKH 143
           + +K  +++    +  F E A  + +L ++ L    G C  GDE +LV E++   +L  +
Sbjct: 43  VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTY 102
Query: 144 LFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGL 202
           L       +    +L VA  +A A+ +   +E  L H ++ A  I+   + + +      
Sbjct: 103 L-KKNKNCINILWKLEVAKQLAAAMHFL--EENTLIHGNVCAKNILLIREEDRKTGNPPF 159
Query: 203 MKNSRDGRSYST--------NLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPP 253
           +K S  G S +          + + PPE +   + +   +  +SFGT L ++ SG   P 
Sbjct: 160 IKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPL 219
Query: 254 SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313
           S ALD    R +Q   D     Q  + +  EL  L + C+ YEP  RP+ R+++  L +L
Sbjct: 220 S-ALD--SQRKLQFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 25  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 81
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 82  TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 140
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 141 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 198
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 199 LTTKGRVP 206

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 34  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 93  IEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 151
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 152 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 301
            +   + P   +DL +   +       LE  +  +  EG   ++  L   C Q+ P +RP
Sbjct: 211 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 302 NPRSLVTALVTL 313
           +   +  A  T+
Sbjct: 263 SFAEIHQAFETM 274

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 31  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 87
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + ++  IA  + Y   +   ++ DL A  I+  +
Sbjct: 88  TEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAY-VERMNYVHRDLRAANILVGE 146
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 147 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 204
Query: 245 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
           L +   +P P       LD +           C E          L  L  +C + EP E
Sbjct: 205 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 255
Query: 300 RPN 302
           RP 
Sbjct: 256 RPT 258

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 117/256 (45%), Gaps = 22/256 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       +V
Sbjct: 48  VYVGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIV 106
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYMP   L  +L     + +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 107 TEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 165
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L     + +S +++FG LL ++
Sbjct: 166 NHVVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 301
            +   + P   +DL +  ++       LE  +  +  EG   ++  L   C ++ P +RP
Sbjct: 225 AT-YGMSPYPGIDLSQVYDL-------LEKGYRMEQPEGCPPKVYELMRACWKWSPADRP 276
Query: 302 NPRSLVTALVTLQKDT 317
           +      A  T+  D+
Sbjct: 277 SFAETHQAFETMFHDS 292

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 120/259 (46%), Gaps = 22/259 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 275 VYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 333
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ +L A   +  +
Sbjct: 334 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRNLAARNCLVGE 392
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 393 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 451
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 301
            +   + P   +DL       +     LE  +  +  EG   ++  L   C Q+ P +RP
Sbjct: 452 AT-YGMSPYPGIDL-------SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 503
Query: 302 NPRSLVTALVTLQKDTEVS 320
           +   +  A  T+ +++ +S
Sbjct: 504 SFAEIHQAFETMFQESSIS 522

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 34  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 91  IEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 208 LTTKGRVP 215

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 31  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 87
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + ++  IA  + Y   +   ++ DL A  I+  +
Sbjct: 88  TEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAY-VERMNYVHRDLRAANILVGE 146
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 147 NLVCKVADFGLARLIEDNEWTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 204
Query: 245 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
           L +   +P P       LD +           C E          L  L  +C + EP E
Sbjct: 205 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 255
Query: 300 RPN 302
           RP 
Sbjct: 256 RPT 258

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 23  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 79
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 80  TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 138
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 139 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 196
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 197 LTTKGRVP 204

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 34  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 91  TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLAAANILVGE 149
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 208 LTTKGRVP 215

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 34  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 91  IEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 208 LTTKGRVP 215

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 34  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 91  CEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 208 LTTKGRVP 215

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + ++R+ +L  L     E +   +V
Sbjct: 34  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKIRHEKLVQLYAVVSE-EPIYIV 90
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 91  TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 208 LTTKGRVP 215

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFN-RSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K     +  P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 201 VWMGTWNGTTRVAIKTLKPGNMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 257
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 258 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRAANILVGE 316
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 317 NLVCKVADFGLGRLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 374
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 375 LTTKGRVP 382

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 19/227 (8%)
Query: 97  ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAM 156
           +  F E A  + +L ++ L    G C  GDE +LV E++   +L  +L       +    
Sbjct: 56  SESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKK-NKNCINILW 114
Query: 157 RLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST- 214
           +L VA  +A A+ +   +E  L H ++ A  I+   + + +      +K S  G S +  
Sbjct: 115 KLEVAKQLAWAMHFL--EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVL 172
Query: 215 -------NLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ 266
                   + + PPE +   + +   +  +SFGT L ++ SG   P S ALD    R +Q
Sbjct: 173 PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS-ALD--SQRKLQ 229
Query: 267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313
              D     Q  + +  EL  L + C+ YEP  RP+ R+++  L +L
Sbjct: 230 FYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 34  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM    L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 91  TEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 208 LTTKGRVP 215

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
            +V + G      V+ G   N  ++AVK   +      + FLEEA  +  L++ +L  L 
Sbjct: 15  KLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLY 73
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
               + +   ++ E+M   +L   L   E   +     +  +  IAE + Y   K   ++
Sbjct: 74  AVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IH 132
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPE 232
            DL A  ++  + +  +++ FGL +        +R+G  +   + +T PE +  G  T +
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGCFTIK 190
Query: 233 SVMYSFGTLLLDLLSGKHIP 252
           S ++SFG LL ++++   IP
Sbjct: 191 SNVWSFGILLYEIVTYGKIP 210

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+ G   N  ++AVK   +      + FLEEA  +  L++ +L  L       +   ++ 
Sbjct: 29  VWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIIT 87
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           EYM   +L   L   E   +     +  +  IAE + Y   K   ++ DL A  ++  + 
Sbjct: 88  EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IHRDLRAANVLVSES 146
Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +  +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL ++
Sbjct: 147 LMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGCFTIKSDVWSFGILLYEI 204
Query: 246 LSGKHIP 252
           ++   IP
Sbjct: 205 VTYGKIP 211

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             V E G     +V+ G   N+ ++A+K     +  +   F+EEA  + +L + +L  L 
Sbjct: 30  TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLY 88
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERA 177
           G C E     LV E+M +  L+ +L    TQ   +A    L + L + E + Y   +   
Sbjct: 89  GVCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAY-LEEACV 144
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPE 232
           ++ DL A   +  ++   ++S FG+ +   D +  S+      + +  PE     R + +
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 204
Query: 233 SVMYSFGTLLLDLLSGKHIP 252
           S ++SFG L+ ++ S   IP
Sbjct: 205 SDVWSFGVLMWEVFSEGKIP 224

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/264 (20%), Positives = 118/264 (44%), Gaps = 18/264 (6%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
            ++ E G     VV  GK + Q+ +AVK     +  +  +F +EA+ + +L + +L    
Sbjct: 11  TLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLVKFY 69
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
           G C +     +V EY+ N  L  +L     + ++ +  L +   + E + +  S  + ++
Sbjct: 70  GVCSKEYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLES-HQFIH 127
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESV 234
            DL A   + D D+  ++S FG+ +   D +  S+      + ++ PE     + + +S 
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 235 MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS---CLEGQFSSDEGTELVRLASR 291
           +++FG L+ ++ S   +P     DL  +  +               +SD    + ++   
Sbjct: 188 VWAFGILMWEVFSLGKMP----YDLYTNSEVVLKVSQGHRLYRPHLASD---TIYQIMYS 240
Query: 292 CLQYEPRERPNPRSLVTALVTLQK 315
           C    P +RP  + L++++  L++
Sbjct: 241 CWHELPEKRPTFQQLLSSIEPLRE 264

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 34  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM    L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 91  MEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 208 LTTKGRVP 215

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 117/257 (45%), Gaps = 24/257 (9%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 34  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 93  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 151
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           +   +++ FGL +        +  G  +   + +T PE L   + + +S +++FG LL +
Sbjct: 152 NHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
Query: 245 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRER 300
           + +   + P   +DL +   +       LE  +  +  EG   ++  L   C Q+ P +R
Sbjct: 210 IAT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDR 261
Query: 301 PNPRSLVTALVTLQKDT 317
           P+   +  A  T+ +++
Sbjct: 262 PSFAEIHQAFETMFQES 278

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 73  VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
           VY G L +    +   AVK  NR +   +  QFL E   +    +  + +LLG C   + 
Sbjct: 44  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 103
Query: 128 R-LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             L+V  YM +  L ++    ET        +   L +A+ ++Y  SK + ++ DL A  
Sbjct: 104 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 161
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 238
            + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++SF
Sbjct: 162 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 221
Query: 239 GTLLLDLLSGKHIPP 253
           G LL +L++ +  PP
Sbjct: 222 GVLLWELMT-RGAPP 235

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 73  VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
           VY G L +    +   AVK  NR +   +  QFL E   +    +  + +LLG C   + 
Sbjct: 46  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 128 R-LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             L+V  YM +  L ++    ET        +   L +A+ ++Y  SK + ++ DL A  
Sbjct: 106 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 163
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 238
            + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 239 GTLLLDLLSGKHIPP 253
           G LL +L++ +  PP
Sbjct: 224 GVLLWELMT-RGAPP 237

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 73  VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
           VY G L +    +   AVK  NR +   +  QFL E   +    +  + +LLG C   + 
Sbjct: 65  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 124
Query: 128 R-LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             L+V  YM +  L ++    ET        +   L +A+ ++Y  SK + ++ DL A  
Sbjct: 125 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 182
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 238
            + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++SF
Sbjct: 183 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 242
Query: 239 GTLLLDLLSGKHIPP 253
           G LL +L++ +  PP
Sbjct: 243 GVLLWELMT-RGAPP 256

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 73  VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
           VY G L +    +   AVK  NR +   +  QFL E   +    +  + +LLG C   + 
Sbjct: 64  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 123
Query: 128 R-LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             L+V  YM +  L ++    ET        +   L +A+ ++Y  SK + ++ DL A  
Sbjct: 124 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 181
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 238
            + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++SF
Sbjct: 182 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 241
Query: 239 GTLLLDLLSGKHIPP 253
           G LL +L++ +  PP
Sbjct: 242 GVLLWELMT-RGAPP 255

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 73  VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
           VY G L +    +   AVK  NR +   +  QFL E   +    +  + +LLG C   + 
Sbjct: 45  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 104
Query: 128 R-LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             L+V  YM +  L ++    ET        +   L +A+ ++Y  SK + ++ DL A  
Sbjct: 105 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 162
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 238
            + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++SF
Sbjct: 163 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 222
Query: 239 GTLLLDLLSGKHIPP 253
           G LL +L++ +  PP
Sbjct: 223 GVLLWELMT-RGAPP 236

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 73  VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
           VY G L +    +   AVK  NR +   +  QFL E   +    +  + +LLG C   + 
Sbjct: 38  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 97
Query: 128 R-LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             L+V  YM +  L ++    ET        +   L +A+ ++Y  SK + ++ DL A  
Sbjct: 98  SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 155
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 238
            + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++SF
Sbjct: 156 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 215
Query: 239 GTLLLDLLSGKHIPP 253
           G LL +L++ +  PP
Sbjct: 216 GVLLWELMT-RGAPP 229

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 73  VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
           VY G L +    +   AVK  NR +   +  QFL E   +    +  + +LLG C   + 
Sbjct: 43  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 102
Query: 128 R-LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             L+V  YM +  L ++    ET        +   L +A+ ++Y  SK + ++ DL A  
Sbjct: 103 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 160
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 238
            + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++SF
Sbjct: 161 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 220
Query: 239 GTLLLDLLSGKHIPP 253
           G LL +L++ +  PP
Sbjct: 221 GVLLWELMT-RGAPP 234

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 73  VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
           VY G L +    +   AVK  NR +   +  QFL E   +    +  + +LLG C   + 
Sbjct: 41  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100
Query: 128 R-LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             L+V  YM +  L ++    ET        +   L +A+ ++Y  SK + ++ DL A  
Sbjct: 101 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 158
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 238
            + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++SF
Sbjct: 159 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 218
Query: 239 GTLLLDLLSGKHIPP 253
           G LL +L++ +  PP
Sbjct: 219 GVLLWELMT-RGAPP 232

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 73  VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
           VY G L +    +   AVK  NR +   +  QFL E   +    +  + +LLG C   + 
Sbjct: 46  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 128 R-LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             L+V  YM +  L ++    ET        +   L +A+ ++Y  SK + ++ DL A  
Sbjct: 106 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 163
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 238
            + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 239 GTLLLDLLSGKHIPP 253
           G LL +L++ +  PP
Sbjct: 224 GVLLWELMT-RGAPP 237

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 106/260 (40%), Gaps = 27/260 (10%)
Query: 79  ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           +++  +AVK          + F  EA  +  L++  +    G C +GD  ++V EYM + 
Sbjct: 43  KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 102
Query: 139 TLAKHL--------FHWETQP------MKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
            L K L           + QP      +  +  L +A  IA  + Y  S +  ++ DL  
Sbjct: 103 DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS-QHFVHRDLAT 161
Query: 185 YRIVFDDDVNPRLSCFGLMKNS------RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSF 238
              +   ++  ++  FG+ ++       R G      + + PPE +   + T ES ++SF
Sbjct: 162 RNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 221
Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS-CLEGQFSSDEGTELVRLASRCLQYEP 297
           G +L ++ +    P      L     I+ +T    LE      +    V L   C Q EP
Sbjct: 222 GVILWEIFTYGKQP---WFQLSNTEVIECITQGRVLERPRVCPKEVYDVMLG--CWQREP 276
Query: 298 RERPNPRSLVTALVTLQKDT 317
           ++R N + +   L  L K T
Sbjct: 277 QQRLNIKEIYKILHALGKAT 296

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 22/257 (8%)
Query: 66  GEKAPNVVYKG----KLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLG 120
           G+    VVY G    + +N+ + A+K  +R +       FL E   +  L +  +  L+G
Sbjct: 30  GKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIG 89
Query: 121 CCC--EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 178
                EG   +L+  YM +  L + +   +  P    + +   L +A  +EY  ++++ +
Sbjct: 90  IMLPPEGLPHVLLP-YMCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARGMEYL-AEQKFV 146
Query: 179 YHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVT 230
           + DL A   + D+    +++ FGL ++  D   YS          + +T  E L+T R T
Sbjct: 147 HRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFT 206
Query: 231 PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290
            +S ++SFG LL +LL+ +  PP   +D     +         + ++  D    L ++  
Sbjct: 207 TKSDVWSFGVLLWELLT-RGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPD---SLYQVMQ 262
Query: 291 RCLQYEPRERPNPRSLV 307
           +C + +P  RP  R LV
Sbjct: 263 QCWEADPAVRPTFRVLV 279

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 98/253 (38%), Gaps = 44/253 (17%)
Query: 84  IAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
           +AVK     A  D +  F  EA  + +  N  +  LLG C  G    L+ EYM    L +
Sbjct: 80  VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 139
Query: 143 HLFHWETQ----------------------PMKWAMRLRVALHIAEALEYCTSKERALYH 180
            L                            P+  A +L +A  +A  + Y  S+ + ++ 
Sbjct: 140 FLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAY-LSERKFVHR 198
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESV 234
           DL     +  +++  +++ FGL +N      Y  +      + + PPE +   R T ES 
Sbjct: 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESD 258
Query: 235 MYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
           ++++G +L ++ S    P         +  +RD NI    ++C           EL  L 
Sbjct: 259 VWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENC---------PLELYNLM 309
Query: 290 SRCLQYEPRERPN 302
             C    P +RP+
Sbjct: 310 RLCWSKLPADRPS 322

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 24/252 (9%)
Query: 84  IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTL 140
           +AVK       P  R  + +E   +  L +  +    GCC +  E+   LV EY+P  +L
Sbjct: 46  VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200
             +L       +  A  L  A  I E + Y  S +  ++ +L A  ++ D+D   ++  F
Sbjct: 106 RDYL---PRHSIGLAQLLLFAQQICEGMAYLHS-QHYIHRNLAARNVLLDNDRLVKIGDF 161
Query: 201 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKH 250
           GL K   +G  Y        + + +  PE L+  +    S ++SFG  L +LL+      
Sbjct: 162 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 221
Query: 251 IPPSHALDLI----RDRNIQTLTDSCLEGQFSSDEGT---ELVRLASRCLQYEPRERPNP 303
            PP+  L+LI        +  LT+    G+          E+  L   C + E   RP  
Sbjct: 222 SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTF 281
Query: 304 RSLVTALVTLQK 315
            +L+  L T+ +
Sbjct: 282 ENLIPILKTVHE 293

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 44/252 (17%)
Query: 84  IAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL-- 140
           +AVK    +A P + R  L E   + Q+ +  +  L G C +    LL+ EY    +L  
Sbjct: 56  VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 141 --------------------AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
                               +  L H + + +     +  A  I++ ++Y  ++ + ++ 
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL-AEMKLVHR 174
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESV 234
           DL A  I+  +    ++S FGL ++  +  SY         + +   E L     T +S 
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 235 MYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
           ++SFG LL ++  L G     IPP    +L++  +     D+C E         E+ RL 
Sbjct: 235 VWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSE---------EMYRLM 285
Query: 290 SRCLQYEPRERP 301
            +C + EP +RP
Sbjct: 286 LQCWKQEPDKRP 297

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 24/252 (9%)
Query: 84  IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTL 140
           +AVK       P  R  + +E   +  L +  +    GCC +  E+   LV EY+P  +L
Sbjct: 46  VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200
             +L       +  A  L  A  I E + Y  + +  ++ +L A  ++ D+D   ++  F
Sbjct: 106 RDYL---PRHSIGLAQLLLFAQQICEGMAYLHA-QHYIHRNLAARNVLLDNDRLVKIGDF 161
Query: 201 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKH 250
           GL K   +G  Y        + + +  PE L+  +    S ++SFG  L +LL+      
Sbjct: 162 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 221
Query: 251 IPPSHALDLI----RDRNIQTLTDSCLEGQFSSDEGT---ELVRLASRCLQYEPRERPNP 303
            PP+  L+LI        +  LT+    G+          E+  L   C + E   RP  
Sbjct: 222 SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTF 281
Query: 304 RSLVTALVTLQK 315
            +L+  L T+ +
Sbjct: 282 ENLIPILKTVHE 293

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 22/243 (9%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 42  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 102 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 159
Query: 202 LMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 251
           L K     + +        + + +  PE L   + +  S ++SFG +L +L +       
Sbjct: 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 252 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 303
           PP+  + +I  D+  Q +    +E     G+    +G   E+  + + C      +RP+ 
Sbjct: 220 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
Query: 304 RSL 306
           R L
Sbjct: 280 RDL 282

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 22/243 (9%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 43  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ +L    I+ +++   ++  FG
Sbjct: 103 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRNLATRNILVENENRVKIGDFG 160
Query: 202 LMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 251
           L K     + Y        + + +  PE L   + +  S ++SFG +L +L +       
Sbjct: 161 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 220
Query: 252 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 303
           PP+  + +I  D+  Q +    +E     G+    +G   E+  + + C      +RP+ 
Sbjct: 221 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 280
Query: 304 RSL 306
           R L
Sbjct: 281 RDL 283

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 73  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 133 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 190
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 251
           L K         +      + + +  PE L   + +  S ++SFG +L +L +       
Sbjct: 191 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250
Query: 252 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 303
           PP+  + +I  D+  Q +    +E     G+    +G   E+  + + C      +RP+ 
Sbjct: 251 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 310
Query: 304 RSL 306
           R L
Sbjct: 311 RDL 313

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 47  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 107 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 164
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 251
           L K         +      + + +  PE L   + +  S ++SFG +L +L +       
Sbjct: 165 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 224
Query: 252 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 303
           PP+  + +I  D+  Q +    +E     G+    +G   E+  + + C      +RP+ 
Sbjct: 225 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 284
Query: 304 RSL 306
           R L
Sbjct: 285 RDL 287

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 40  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 100 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 157
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 251
           L K         +      + + +  PE L   + +  S ++SFG +L +L +       
Sbjct: 158 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 217
Query: 252 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 303
           PP+  + +I  D+  Q +    +E     G+    +G   E+  + + C      +RP+ 
Sbjct: 218 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 277
Query: 304 RSL 306
           R L
Sbjct: 278 RDL 280

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 45  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 105 DYL-QAHAERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 162
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 251
           L K         +      + + +  PE L   + +  S ++SFG +L +L +       
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 252 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 303
           PP+  + +I  D+  Q +    +E     G+    +G   E+  + + C      +RP+ 
Sbjct: 223 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
Query: 304 RSL 306
           R L
Sbjct: 283 RDL 285

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 42  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 102 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 159
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 251
           L K         +      + + +  PE L   + +  S ++SFG +L +L +       
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 252 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 303
           PP+  + +I  D+  Q +    +E     G+    +G   E+  + + C      +RP+ 
Sbjct: 220 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
Query: 304 RSL 306
           R L
Sbjct: 280 RDL 282

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 48  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 108 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 165
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 251
           L K         +      + + +  PE L   + +  S ++SFG +L +L +       
Sbjct: 166 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 225
Query: 252 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 303
           PP+  + +I  D+  Q +    +E     G+    +G   E+  + + C      +RP+ 
Sbjct: 226 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 285
Query: 304 RSL 306
           R L
Sbjct: 286 RDL 288

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 60  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 120 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 177
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 251
           L K         +      + + +  PE L   + +  S ++SFG +L +L +       
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 237
Query: 252 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 303
           PP+  + +I  D+  Q +    +E     G+    +G   E+  + + C      +RP+ 
Sbjct: 238 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 297
Query: 304 RSL 306
           R L
Sbjct: 298 RDL 300

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 49  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 109 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 166
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 251
           L K         +      + + +  PE L   + +  S ++SFG +L +L +       
Sbjct: 167 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 226
Query: 252 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 303
           PP+  + +I  D+  Q +    +E     G+    +G   E+  + + C      +RP+ 
Sbjct: 227 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 286
Query: 304 RSL 306
           R L
Sbjct: 287 RDL 289

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 41  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 101 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 158
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 251
           L K         +      + + +  PE L   + +  S ++SFG +L +L +       
Sbjct: 159 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 218
Query: 252 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 303
           PP+  + +I  D+  Q +    +E     G+    +G   E+  + + C      +RP+ 
Sbjct: 219 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 278
Query: 304 RSL 306
           R L
Sbjct: 279 RDL 281

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 24/252 (9%)
Query: 84  IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCE-GDERL-LVAEYMPNDTL 140
           +AVK     A P  R  + +E   +  L +  +    GCC + G   L LV EY+P  +L
Sbjct: 63  VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL 122
Query: 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200
             +L       +  A  L  A  I E + Y  + +  ++ DL A  ++ D+D   ++  F
Sbjct: 123 RDYL---PRHSIGLAQLLLFAQQICEGMAYLHA-QHYIHRDLAARNVLLDNDRLVKIGDF 178
Query: 201 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKH 250
           GL K   +G           + + +  PE L+  +    S ++SFG  L +LL+      
Sbjct: 179 GLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 238
Query: 251 IPPSHALDLI----RDRNIQTLTDSCLEGQFSSDEG---TELVRLASRCLQYEPRERPNP 303
            PP+  L+LI        +  LT+    G+          E+  L   C + E   RP  
Sbjct: 239 SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTF 298
Query: 304 RSLVTALVTLQK 315
            +L+  L T+ +
Sbjct: 299 ENLIPILKTVHE 310

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 60  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 120 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 177
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 251
           L K         +      + + +  PE L   + +  S ++SFG +L +L +       
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 237
Query: 252 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 303
           PP+  + +I  D+  Q +    +E     G+    +G   E+  + + C      +RP+ 
Sbjct: 238 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 297
Query: 304 RSL 306
           R L
Sbjct: 298 RDL 300

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 45  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 105 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 162
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 251
           L K         +      + + +  PE L   + +  S ++SFG +L +L +       
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 252 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 303
           PP+  + +I  D+  Q +    +E     G+    +G   E+  + + C      +RP+ 
Sbjct: 223 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
Query: 304 RSL 306
           R L
Sbjct: 283 RDL 285

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 42  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 102 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 159
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 251
           L K         +      + + +  PE L   + +  S ++SFG +L +L +       
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 252 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 303
           PP+  + +I  D+  Q +    +E     G+    +G   E+  + + C      +RP+ 
Sbjct: 220 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
Query: 304 RSL 306
           R L
Sbjct: 280 RDL 282

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 46  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 106 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 163
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 251
           L K         +      + + +  PE L   + +  S ++SFG +L +L +       
Sbjct: 164 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 223
Query: 252 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 303
           PP+  + +I  D+  Q +    +E     G+    +G   E+  + + C      +RP+ 
Sbjct: 224 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 283
Query: 304 RSL 306
           R L
Sbjct: 284 RDL 286

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 46/253 (18%)
Query: 84  IAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL-- 140
           +AVK    +A P + R  L E   + Q+ +  +  L G C +    LL+ EY    +L  
Sbjct: 56  VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 141 --------------------AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
                               +  L H + + +     +  A  I++ ++Y    E +L H
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA--EMSLVH 173
Query: 181 -DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPES 233
            DL A  I+  +    ++S FGL ++  +  S          + +   E L     T +S
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQS 233
Query: 234 VMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288
            ++SFG LL ++  L G     IPP    +L++  +     D+C E         E+ RL
Sbjct: 234 DVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSE---------EMYRL 284
Query: 289 ASRCLQYEPRERP 301
             +C + EP +RP
Sbjct: 285 MLQCWKQEPDKRP 297

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 110/258 (42%), Gaps = 26/258 (10%)
Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+        ++AVK     +      FL EA  +  L++ +L  L     + +   ++ 
Sbjct: 204 VWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 261
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           E+M   +L   L   E         +  +  IAE + +   +   ++ DL A  I+    
Sbjct: 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSAS 320
Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +  +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL+++
Sbjct: 321 LVCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLMEI 378
Query: 246 LSGKHIP-PSHA-LDLIR--DRNIQT-LTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
           ++   IP P  +  ++IR  +R  +    ++C E         EL  +  RC +  P ER
Sbjct: 379 VTYGRIPYPGMSNPEVIRALERGYRMPRPENCPE---------ELYNIMMRCWKNRPEER 429
Query: 301 PNPRSLVTALVTLQKDTE 318
           P    + + L      TE
Sbjct: 430 PTFEYIQSVLDDFYTATE 447

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 23/256 (8%)
Query: 73  VYKGKLEN-----QFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGD 126
           VYKG L+      +  +A+K          R  FL EA  +GQ  +  +  L G   +  
Sbjct: 60  VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119
Query: 127 ERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
             +++ EYM N  L K L     E   ++    LR    IA  ++Y  +    ++ DL A
Sbjct: 120 PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKYLANMNY-VHRDLAA 175
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDG--RSYSTN-----LAFTPPEYLRTGRVTPESVMYS 237
             I+ + ++  ++S FGL +   D    +Y+T+     + +T PE +   + T  S ++S
Sbjct: 176 RNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWS 235
Query: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
           FG ++ ++++    P       + +  +    +         D  + + +L  +C Q E 
Sbjct: 236 FGIVMWEVMTYGERPYWE----LSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQER 291
Query: 298 RERPNPRSLVTALVTL 313
             RP    +V+ L  L
Sbjct: 292 ARRPKFADIVSILDKL 307

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 104/252 (41%), Gaps = 44/252 (17%)
Query: 84  IAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL-- 140
           +AVK    +A P + R  L E   + Q+ +  +  L G C +    LL+ EY    +L  
Sbjct: 56  VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 141 --------------------AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
                               +  L H + + +     +  A  I++ ++Y  ++ + ++ 
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL-AEMKLVHR 174
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESV 234
           DL A  I+  +    ++S FGL ++  +  S          + +   E L     T +S 
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 235 MYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
           ++SFG LL ++  L G     IPP    +L++  +     D+C E         E+ RL 
Sbjct: 235 VWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSE---------EMYRLM 285
Query: 290 SRCLQYEPRERP 301
            +C + EP +RP
Sbjct: 286 LQCWKQEPDKRP 297

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 113/278 (40%), Gaps = 32/278 (11%)
Query: 66  GEKAPNVVYKGKLENQ------FRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANL 118
           G  A   VY+G++          ++AVK      +  D   FL EA  + +L ++ +   
Sbjct: 54  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRC 113
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 173
           +G   +   R ++ E M    L   L       +QP   AM   L VA  IA   +Y   
Sbjct: 114 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 172
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 224
           +   ++ D+ A   +       R++  G    +RD         G      + + PPE  
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 232
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEG- 282
             G  T ++  +SFG LL ++ S  ++P PS +       N + L      G+    +  
Sbjct: 233 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 285
Query: 283 -TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
              + R+ ++C Q++P +RPN   ++  +    +D +V
Sbjct: 286 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 323

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 62  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 121
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 122 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
           T      + +T PE +   + T  S ++S+G +L +++S    P       + ++++   
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 233
Query: 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
            D         D    L +L   C Q +   RP    +V+ L  L ++
Sbjct: 234 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 79  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 138
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 139 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
           T      + +T PE +   + T  S ++S+G +L +++S    P       + ++++   
Sbjct: 195 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 250
Query: 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
            D         D    L +L   C Q +   RP    +V+ L  L ++
Sbjct: 251 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 298

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT 206
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
           T      + +T PE +   + T  S ++S+G +L +++S    P       + ++++   
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 262
Query: 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
            D         D    L +L   C Q +   RP    +V+ L  L ++
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 22/243 (9%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ E++P  +L 
Sbjct: 45  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
           ++L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 105 EYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 162
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 251
           L K         +      + + +  PE L   + +  S ++SFG +L +L +       
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 252 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 303
           PP+  + +I  D+  Q +    +E     G+    +G   E+  + + C      +RP+ 
Sbjct: 223 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
Query: 304 RSL 306
           R L
Sbjct: 283 RDL 285

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 22/251 (8%)
Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+        ++AVK     +      FL EA  +  L++ +L  L     + +   ++ 
Sbjct: 198 VWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 255
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           E+M   +L   L   E         +  +  IAE + +   +   ++ DL A  I+    
Sbjct: 256 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSAS 314
Query: 193 VNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
           +  +++ FGL   +R G  +   + +T PE +  G  T +S ++SFG LL+++++   IP
Sbjct: 315 LVCKIADFGL---ARVGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 369
Query: 253 -PSHA-LDLIR--DRNIQT-LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 307
            P  +  ++IR  +R  +    ++C E         EL  +  RC +  P ERP    + 
Sbjct: 370 YPGMSNPEVIRALERGYRMPRPENCPE---------ELYNIMMRCWKNRPEERPTFEYIQ 420
Query: 308 TALVTLQKDTE 318
           + L      TE
Sbjct: 421 SVLDDFYTATE 431

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 105/242 (43%), Gaps = 26/242 (10%)
Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+        ++AVK     +      FL EA  +  L++ +L  L     + +   ++ 
Sbjct: 31  VWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 88
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           E+M   +L   L   E         +  +  IAE + +   +   ++ DL A  I+    
Sbjct: 89  EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSAS 147
Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +  +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL+++
Sbjct: 148 LVCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLMEI 205
Query: 246 LSGKHIP-PSHA-LDLIR--DRNIQT-LTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
           ++   IP P  +  ++IR  +R  +    ++C E         EL  +  RC +  P ER
Sbjct: 206 VTYGRIPYPGMSNPEVIRALERGYRMPRPENCPE---------ELYNIMMRCWKNRPEER 256
Query: 301 PN 302
           P 
Sbjct: 257 PT 258

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 113/278 (40%), Gaps = 32/278 (11%)
Query: 66  GEKAPNVVYKGKLENQ------FRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANL 118
           G  A   VY+G++          ++AVK      +  D   FL EA  + +L ++ +   
Sbjct: 40  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRC 99
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 173
           +G   +   R ++ E M    L   L       +QP   AM   L VA  IA   +Y   
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 158
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 224
           +   ++ D+ A   +       R++  G    +RD         G      + + PPE  
Sbjct: 159 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 218
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEG- 282
             G  T ++  +SFG LL ++ S  ++P PS +       N + L      G+    +  
Sbjct: 219 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 271
Query: 283 -TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
              + R+ ++C Q++P +RPN   ++  +    +D +V
Sbjct: 272 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 309

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
           T      + +T PE +   + T  S ++S+G +L +++S    P       + ++++   
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 262
Query: 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
            D         D    L +L   C Q +   RP    +V+ L  L ++
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 89  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 148
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 149 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 204
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
           T      + +T PE +   + T  S ++S+G +L +++S    P       + ++++   
Sbjct: 205 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 260
Query: 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
            D         D    L +L   C Q +   RP    +V+ L  L ++
Sbjct: 261 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 308

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
           T      + +T PE +   + T  S ++S+G +L +++S    P       + ++++   
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 262
Query: 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
            D         D    L +L   C Q +   RP    +V+ L  L ++
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
           T      + +T PE +   + T  S ++S+G +L +++S    P       + ++++   
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 262
Query: 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
            D         D    L +L   C Q +   RP    +V+ L  L ++
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
           T      + +T PE +   + T  S ++S+G +L +++S    P       + ++++   
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 262
Query: 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
            D         D    L +L   C Q +   RP    +V+ L  L ++
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
           T      + +T PE +   + T  S ++S+G +L +++S    P       + ++++   
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 262
Query: 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
            D         D    L +L   C Q +   RP    +V+ L  L ++
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
           T      + +T PE +   + T  S ++S+G +L +++S    P       + ++++   
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 262
Query: 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
            D         D    L +L   C Q +   RP    +V+ L  L ++
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 41/257 (15%)
Query: 83  RIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           ++AVK     A      D    +E  + +G+ +N  + NLLG C +     ++ EY    
Sbjct: 62  KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKG 119
Query: 139 TLAKHLFHWETQPMKWAMR--------------LRVALHIAEALEYCTSKERALYHDLNA 184
            L ++L   E   ++++                +  A  +A  +EY  SK + ++ DL A
Sbjct: 120 NLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAA 178
Query: 185 YRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSF 238
             ++  +D   +++ FGL ++    D    +TN    + +  PE L     T +S ++SF
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 239 GTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
           G LL ++  L G     +P      L+++ +      +C           EL  +   C 
Sbjct: 239 GVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYMMMRDCW 289
Query: 294 QYEPRERPNPRSLVTAL 310
              P +RP  + LV  L
Sbjct: 290 HAVPSQRPTFKQLVEDL 306

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 66  GEKAPNVVYKGKLENQ------FRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANL 118
           G  A   VY+G++          ++AVK      +  D   FL EA  + +  ++ +   
Sbjct: 39  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 98
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 173
           +G   +   R ++ E M    L   L       +QP   AM   L VA  IA   +Y   
Sbjct: 99  IGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 157
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 224
           +   ++ D+ A   +       R++  G    +RD         G      + + PPE  
Sbjct: 158 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 217
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEG- 282
             G  T ++  +SFG LL ++ S  ++P PS +       N + L      G+    +  
Sbjct: 218 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 270
Query: 283 -TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
              + R+ ++C Q++P +RPN   ++  +    +D +V
Sbjct: 271 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 308

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 66  GEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 118
           G  A   VY+G++          ++AVK      +  D   FL EA  + +  ++ +   
Sbjct: 31  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 90
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 173
           +G   +   R ++ E M    L   L       +QP   AM   L VA  IA   +Y   
Sbjct: 91  IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 149
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 224
           +   ++ D+ A   +       R++  G    +RD         G      + + PPE  
Sbjct: 150 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 209
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEG- 282
             G  T ++  +SFG LL ++ S  ++P PS +       N + L      G+    +  
Sbjct: 210 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 262
Query: 283 -TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
              + R+ ++C Q++P +RPN   ++  +    +D +V
Sbjct: 263 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 300

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 66  GEKAPNVVYKGKLENQ------FRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANL 118
           G  A   VY+G++          ++AVK      +  D   FL EA  + +  ++ +   
Sbjct: 54  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 113
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 173
           +G   +   R ++ E M    L   L       +QP   AM   L VA  IA   +Y   
Sbjct: 114 IGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 172
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 224
           +   ++ D+ A   +       R++  G    +RD         G      + + PPE  
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 232
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEG- 282
             G  T ++  +SFG LL ++ S  ++P PS +       N + L      G+    +  
Sbjct: 233 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 285
Query: 283 -TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
              + R+ ++C Q++P +RPN   ++  +    +D +V
Sbjct: 286 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 323

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 66  GEKAPNVVYKGKLENQ------FRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANL 118
           G  A   VY+G++          ++AVK      +  D   FL EA  + +  ++ +   
Sbjct: 39  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 98
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 173
           +G   +   R ++ E M    L   L       +QP   AM   L VA  IA   +Y   
Sbjct: 99  IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 157
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 224
           +   ++ D+ A   +       R++  G    +RD         G      + + PPE  
Sbjct: 158 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 217
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEG- 282
             G  T ++  +SFG LL ++ S  ++P PS +       N + L      G+    +  
Sbjct: 218 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 270
Query: 283 -TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
              + R+ ++C Q++P +RPN   ++  +    +D +V
Sbjct: 271 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 308

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V E M N +L   L   + Q   ++  
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV 150
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S   A++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 66  GEKAPNVVYKGKLENQ------FRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANL 118
           G  A   VY+G++          ++AVK      +  D   FL EA  + +  ++ +   
Sbjct: 56  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 115
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 173
           +G   +   R ++ E M    L   L       +QP   AM   L VA  IA   +Y   
Sbjct: 116 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 174
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 224
           +   ++ D+ A   +       R++  G    +RD         G      + + PPE  
Sbjct: 175 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 234
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEG- 282
             G  T ++  +SFG LL ++ S  ++P PS +       N + L      G+    +  
Sbjct: 235 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 287
Query: 283 -TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
              + R+ ++C Q++P +RPN   ++  +    +D +V
Sbjct: 288 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 325

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 112/265 (42%), Gaps = 22/265 (8%)
Query: 66  GEKAPNVVYKGKL-ENQFRIAVKRF-------NRSAWPDARQFLEEARAVGQLRNRRLAN 117
           G+    +V+KG+L +++  +A+K                 ++F  E   +  L +  +  
Sbjct: 28  GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
           L G     +   +V E++P   L   L   +  P+KW+++LR+ L IA  +EY  ++   
Sbjct: 88  LYGLMH--NPPRMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 178 LYH-DLNAYRIVFD--DDVNP---RLSCFGLMKNSRDGRS-YSTNLAFTPPEYLRTGR-- 228
           + H DL +  I     D+  P   +++ FGL + S    S    N  +  PE +      
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 229 VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288
            T ++  YSF  +L  +L+G+   P       + + I  + +  L      D    L  +
Sbjct: 205 YTEKADTYSFAMILYTILTGEG--PFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNV 262
Query: 289 ASRCLQYEPRERPNPRSLVTALVTL 313
              C   +P++RP+   +V  L  L
Sbjct: 263 IELCWSGDPKKRPHFSYIVKELSEL 287

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 66  GEKAPNVVYKGKLENQ------FRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANL 118
           G  A   VY+G++          ++AVK      +  D   FL EA  + +  ++ +   
Sbjct: 57  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 116
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 173
           +G   +   R ++ E M    L   L       +QP   AM   L VA  IA   +Y   
Sbjct: 117 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 175
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 224
           +   ++ D+ A   +       R++  G    +RD         G      + + PPE  
Sbjct: 176 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAF 235
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEG- 282
             G  T ++  +SFG LL ++ S  ++P PS +       N + L      G+    +  
Sbjct: 236 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 288
Query: 283 -TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
              + R+ ++C Q++P +RPN   ++  +    +D +V
Sbjct: 289 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 326

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 66  GEKAPNVVYKGKLENQ------FRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANL 118
           G  A   VY+G++          ++AVK      +  D   FL EA  + +  ++ +   
Sbjct: 80  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 139
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 173
           +G   +   R ++ E M    L   L       +QP   AM   L VA  IA   +Y   
Sbjct: 140 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 198
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 224
           +   ++ D+ A   +       R++  G    +RD         G      + + PPE  
Sbjct: 199 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAF 258
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEG- 282
             G  T ++  +SFG LL ++ S  ++P PS +       N + L      G+    +  
Sbjct: 259 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 311
Query: 283 -TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
              + R+ ++C Q++P +RPN   ++  +    +D +V
Sbjct: 312 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 349

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 20/188 (10%)
Query: 79  ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           +++  +AVK    ++    + F  EA  +  L+++ +    G C EG   L+V EYM + 
Sbjct: 69  QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 128
Query: 139 TL----------AKHLFHWET---QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
            L          AK L   E     P+     L VA  +A  + Y       ++ DL   
Sbjct: 129 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATR 187
Query: 186 RIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG 239
             +    +  ++  FG+ ++       R G      + + PPE +   + T ES ++SFG
Sbjct: 188 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 247
Query: 240 TLLLDLLS 247
            +L ++ +
Sbjct: 248 VVLWEIFT 255

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 66  GEKAPNVVYKGKLENQ------FRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANL 118
           G  A   VY+G++          ++AVK      +  D   FL EA  + +  ++ +   
Sbjct: 54  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRC 113
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 173
           +G   +   R ++ E M    L   L       +QP   AM   L VA  IA   +Y   
Sbjct: 114 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 172
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 224
           +   ++ D+ A   +       R++  G    +RD         G      + + PPE  
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 232
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEG- 282
             G  T ++  +SFG LL ++ S  ++P PS +       N + L      G+    +  
Sbjct: 233 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 285
Query: 283 -TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
              + R+ ++C Q++P +RPN   ++  +    +D +V
Sbjct: 286 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 323

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 66  GEKAPNVVYKGKLENQ------FRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANL 118
           G  A   VY+G++          ++AVK      +  D   FL EA  + +  ++ +   
Sbjct: 40  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 99
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 173
           +G   +   R ++ E M    L   L       +QP   AM   L VA  IA   +Y   
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 158
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 224
           +   ++ D+ A   +       R++  G    +RD         G      + + PPE  
Sbjct: 159 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 218
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEG- 282
             G  T ++  +SFG LL ++ S  ++P PS +       N + L      G+    +  
Sbjct: 219 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 271
Query: 283 -TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
              + R+ ++C Q++P +RPN   ++  +    +D +V
Sbjct: 272 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 309

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 41/257 (15%)
Query: 83  RIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           ++AVK     A      D    +E  + +G+ +N  + NLLG C +     ++ EY    
Sbjct: 62  KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKG 119
Query: 139 TLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
            L ++L               H   + +     +  A  +A  +EY  SK + ++ DL A
Sbjct: 120 NLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAA 178
Query: 185 YRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSF 238
             ++  +D   +++ FGL ++    D    +TN    + +  PE L     T +S ++SF
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 239 GTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
           G LL ++  L G     +P      L+++ +      +C           EL  +   C 
Sbjct: 239 GVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYMMMRDCW 289
Query: 294 QYEPRERPNPRSLVTAL 310
              P +RP  + LV  L
Sbjct: 290 HAVPSQRPTFKQLVEDL 306

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 66  GEKAPNVVYKGKLENQ------FRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANL 118
           G  A   VY+G++          ++AVK      +  D   FL EA  + +  ++ +   
Sbjct: 46  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 105
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 173
           +G   +   R ++ E M    L   L       +QP   AM   L VA  IA   +Y   
Sbjct: 106 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL-E 164
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 224
           +   ++ D+ A   +       R++  G    +RD         G      + + PPE  
Sbjct: 165 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 224
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEG- 282
             G  T ++  +SFG LL ++ S  ++P PS +       N + L      G+    +  
Sbjct: 225 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 277
Query: 283 -TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
              + R+ ++C Q++P +RPN   ++  +    +D +V
Sbjct: 278 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 315

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 102/252 (40%), Gaps = 24/252 (9%)
Query: 84  IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTL 140
           +AVK       P  R  +  E   +  L +  +    GCC +  E+   LV EY+P  +L
Sbjct: 41  VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 100
Query: 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200
             +L       +  A  L  A  I E + Y  + +  ++  L A  ++ D+D   ++  F
Sbjct: 101 RDYL---PRHCVGLAQLLLFAQQICEGMAYLHA-QHYIHRALAARNVLLDNDRLVKIGDF 156
Query: 201 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKH 250
           GL K   +G  Y        + + +  PE L+  +    S ++SFG  L +LL+      
Sbjct: 157 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQ 216
Query: 251 IPPSHALDLIRDRNIQT----LTDSCLEGQFSSDEG---TELVRLASRCLQYEPRERPNP 303
            P +   +LI     Q     LT+    G+          E+  L   C + E   RP  
Sbjct: 217 SPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTF 276
Query: 304 RSLVTALVTLQK 315
           ++LV  L T Q+
Sbjct: 277 QNLVPILQTAQE 288

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 66  GEKAPNVVYKGKLENQ------FRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANL 118
           G  A   VY+G++          ++AVK      +  D   FL EA  + +  ++ +   
Sbjct: 66  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 125
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 173
           +G   +   R ++ E M    L   L       +QP   AM   L VA  IA   +Y   
Sbjct: 126 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL-E 184
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 224
           +   ++ D+ A   +       R++  G    +RD         G      + + PPE  
Sbjct: 185 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 244
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEG- 282
             G  T ++  +SFG LL ++ S  ++P PS +       N + L      G+    +  
Sbjct: 245 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 297
Query: 283 -TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
              + R+ ++C Q++P +RPN   ++  +    +D +V
Sbjct: 298 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 335

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 102/252 (40%), Gaps = 24/252 (9%)
Query: 84  IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTL 140
           +AVK       P  R  +  E   +  L +  +    GCC +  E+   LV EY+P  +L
Sbjct: 40  VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 99
Query: 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200
             +L       +  A  L  A  I E + Y  + +  ++  L A  ++ D+D   ++  F
Sbjct: 100 RDYL---PRHCVGLAQLLLFAQQICEGMAYLHA-QHYIHRALAARNVLLDNDRLVKIGDF 155
Query: 201 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKH 250
           GL K   +G  Y        + + +  PE L+  +    S ++SFG  L +LL+      
Sbjct: 156 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQ 215
Query: 251 IPPSHALDLIRDRNIQT----LTDSCLEGQFSSDEG---TELVRLASRCLQYEPRERPNP 303
            P +   +LI     Q     LT+    G+          E+  L   C + E   RP  
Sbjct: 216 SPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTF 275
Query: 304 RSLVTALVTLQK 315
           ++LV  L T Q+
Sbjct: 276 QNLVPILQTAQE 287

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 20/188 (10%)
Query: 79  ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           +++  +AVK    ++    + F  EA  +  L+++ +    G C EG   L+V EYM + 
Sbjct: 40  QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 99
Query: 139 TL----------AKHLFHWET---QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
            L          AK L   E     P+     L VA  +A  + Y       ++ DL   
Sbjct: 100 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATR 158
Query: 186 RIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG 239
             +    +  ++  FG+ ++       R G      + + PPE +   + T ES ++SFG
Sbjct: 159 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 218
Query: 240 TLLLDLLS 247
            +L ++ +
Sbjct: 219 VVLWEIFT 226

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 20/188 (10%)
Query: 79  ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           +++  +AVK    ++    + F  EA  +  L+++ +    G C EG   L+V EYM + 
Sbjct: 46  QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 105
Query: 139 TL----------AKHLFHWET---QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
            L          AK L   E     P+     L VA  +A  + Y       ++ DL   
Sbjct: 106 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATR 164
Query: 186 RIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG 239
             +    +  ++  FG+ ++       R G      + + PPE +   + T ES ++SFG
Sbjct: 165 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 224
Query: 240 TLLLDLLS 247
            +L ++ +
Sbjct: 225 VVLWEIFT 232

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 106/265 (40%), Gaps = 41/265 (15%)
Query: 75  KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           K K     ++AVK     A      D    +E  + +G+ +N  + NLLG C +     +
Sbjct: 54  KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYV 111
Query: 131 VAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
           + EY     L ++L               H   + +     +  A  +A  +EY  SK +
Sbjct: 112 IVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-K 170
Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVT 230
            ++ DL A  ++  +D   +++ FGL ++    D    +TN    + +  PE L     T
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 231 PESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285
            +S ++SFG LL ++  L G     +P      L+++ +      +C           EL
Sbjct: 231 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NEL 281
Query: 286 VRLASRCLQYEPRERPNPRSLVTAL 310
             +   C    P +RP  + LV  L
Sbjct: 282 YMMMRDCWHAVPSQRPTFKQLVEDL 306

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 41/257 (15%)
Query: 83  RIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           ++AVK     A      D    +E  + +G+ +N  + NLLG C +     ++ EY    
Sbjct: 54  KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKG 111
Query: 139 TLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
            L ++L               H   + +     +  A  +A  +EY  SK + ++ DL A
Sbjct: 112 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAA 170
Query: 185 YRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSF 238
             ++  +D   +++ FGL ++    D    +TN    + +  PE L     T +S ++SF
Sbjct: 171 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 230
Query: 239 GTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
           G LL ++  L G     +P      L+++ +      +C           EL  +   C 
Sbjct: 231 GVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYMMMRDCW 281
Query: 294 QYEPRERPNPRSLVTAL 310
              P +RP  + LV  L
Sbjct: 282 HAVPSQRPTFKQLVEDL 298

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 106/265 (40%), Gaps = 41/265 (15%)
Query: 75  KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           K K     ++AVK     A      D    +E  + +G+ +N  + NLLG C +     +
Sbjct: 39  KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYV 96
Query: 131 VAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
           + EY     L ++L               H   + +     +  A  +A  +EY  SK +
Sbjct: 97  IVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-K 155
Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVT 230
            ++ DL A  ++  +D   +++ FGL ++    D    +TN    + +  PE L     T
Sbjct: 156 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 215
Query: 231 PESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285
            +S ++SFG LL ++  L G     +P      L+++ +      +C           EL
Sbjct: 216 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NEL 266
Query: 286 VRLASRCLQYEPRERPNPRSLVTAL 310
             +   C    P +RP  + LV  L
Sbjct: 267 YMMMRDCWHAVPSQRPTFKQLVEDL 291

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 112/279 (40%), Gaps = 34/279 (12%)
Query: 66  GEKAPNVVYKGKLENQ------FRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANL 118
           G  A   VY+G++          ++AVK      +  D   FL EA  + +  ++ +   
Sbjct: 40  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 99
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 173
           +G   +   R ++ E M    L   L       +QP   AM   L VA  IA   +Y   
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL-- 157
Query: 174 KERALYHDLNAYRIVFDDDVNP----RLSCFGLMKN------SRDGRSYSTNLAFTPPEY 223
           +E    H   A R        P    ++  FG+ ++       R G      + + PPE 
Sbjct: 158 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEA 217
Query: 224 LRTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282
              G  T ++  +SFG LL ++ S  ++P PS +       N + L      G+    + 
Sbjct: 218 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKN 270
Query: 283 --TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
               + R+ ++C Q++P +RPN   ++  +    +D +V
Sbjct: 271 CPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 309

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 41/257 (15%)
Query: 83  RIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           ++AVK     A      D    +E  + +G+ +N  + NLLG C +     ++ EY    
Sbjct: 103 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKG 160
Query: 139 TLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
            L ++L               H   + +     +  A  +A  +EY  SK + ++ DL A
Sbjct: 161 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAA 219
Query: 185 YRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSF 238
             ++  +D   +++ FGL ++    D    +TN    + +  PE L     T +S ++SF
Sbjct: 220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 279
Query: 239 GTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
           G LL ++  L G     +P      L+++ +      +C           EL  +   C 
Sbjct: 280 GVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYMMMRDCW 330
Query: 294 QYEPRERPNPRSLVTAL 310
              P +RP  + LV  L
Sbjct: 331 HAVPSQRPTFKQLVEDL 347

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 41/257 (15%)
Query: 83  RIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           ++AVK     A      D    +E  + +G+ +N  + NLLG C +     ++ EY    
Sbjct: 62  KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKG 119
Query: 139 TLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
            L ++L               H   + +     +  A  +A  +EY  SK + ++ DL A
Sbjct: 120 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAA 178
Query: 185 YRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSF 238
             ++  +D   +++ FGL ++    D    +TN    + +  PE L     T +S ++SF
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 239 GTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
           G LL ++  L G     +P      L+++ +      +C           EL  +   C 
Sbjct: 239 GVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYMMMRDCW 289
Query: 294 QYEPRERPNPRSLVTAL 310
              P +RP  + LV  L
Sbjct: 290 HAVPSQRPTFKQLVEDL 306

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 41/257 (15%)
Query: 83  RIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           ++AVK     A      D    +E  + +G+ +N  + NLLG C +     ++ EY    
Sbjct: 51  KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKG 108
Query: 139 TLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
            L ++L               H   + +     +  A  +A  +EY  SK + ++ DL A
Sbjct: 109 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAA 167
Query: 185 YRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSF 238
             ++  +D   +++ FGL ++    D    +TN    + +  PE L     T +S ++SF
Sbjct: 168 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 227
Query: 239 GTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
           G LL ++  L G     +P      L+++ +      +C           EL  +   C 
Sbjct: 228 GVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYMMMRDCW 278
Query: 294 QYEPRERPNPRSLVTAL 310
              P +RP  + LV  L
Sbjct: 279 HAVPSQRPTFKQLVEDL 295

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 41/257 (15%)
Query: 83  RIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           ++AVK     A      D    +E  + +G+ +N  + NLLG C +     ++ EY    
Sbjct: 55  KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKG 112
Query: 139 TLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
            L ++L               H   + +     +  A  +A  +EY  SK + ++ DL A
Sbjct: 113 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAA 171
Query: 185 YRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSF 238
             ++  +D   +++ FGL ++    D    +TN    + +  PE L     T +S ++SF
Sbjct: 172 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 231
Query: 239 GTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
           G LL ++  L G     +P      L+++ +      +C           EL  +   C 
Sbjct: 232 GVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYMMMRDCW 282
Query: 294 QYEPRERPNPRSLVTAL 310
              P +RP  + LV  L
Sbjct: 283 HAVPSQRPTFKQLVEDL 299

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 23/225 (10%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  + +L G    G   ++V E+M N  L   L   + Q   ++  
Sbjct: 89  RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLV 148
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  + Y       ++ DL A  I+ + ++  ++S FGL +   D     Y+
Sbjct: 149 GMLR---GIAAGMRYLADMGY-VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYT 204
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
           T      + +T PE ++  + T  S ++S+G ++ +++S    P         D + Q +
Sbjct: 205 TTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP-------YWDMSNQDV 257
Query: 269 TDSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
             +  EG       D    L +L   C Q E  ERP    +V  L
Sbjct: 258 IKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGIL 302

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 78/161 (48%), Gaps = 15/161 (9%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  + +L G   +    +++ E+M N +L   L   + Q   ++  
Sbjct: 79  RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV 138
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS---Y 212
             LR    IA  ++Y       ++ DL A  I+ + ++  ++S FGL +   D  S   Y
Sbjct: 139 GMLR---GIAAGMKYLADMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 194
Query: 213 STNLA------FTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           ++ L       +T PE ++  + T  S ++S+G ++ +++S
Sbjct: 195 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 6/203 (2%)
Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRV 160
           L E + + ++ +R + +L       D   LV   M    L  H++H        A  +  
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 161 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS---TNLA 217
           A  I   LE    +ER +Y DL    I+ DD  + R+S  GL  +  +G++       + 
Sbjct: 292 AAEICCGLED-LHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277
           +  PE ++  R T     ++ G LL ++++G+  P       I+   ++ L     E ++
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS-PFQQRKKKIKREEVERLVKEVPE-EY 408
Query: 278 SSDEGTELVRLASRCLQYEPRER 300
           S     +   L S+ L  +P ER
Sbjct: 409 SERFSPQARSLCSQLLCKDPAER 431

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 17/195 (8%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG         +  +A+K  N +  P A  +F++EA  +  + +  L  LL
Sbjct: 47  GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 106
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
           G C     + LV + MP+  L +++ H     +   + L   + IA+ + Y   +ER L 
Sbjct: 107 GVCLSPTIQ-LVTQLMPHGCLLEYV-HEHKDNIGSQLLLNWCVQIAKGMMYL--EERRLV 162
Query: 180 H-DLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYL-----RTGRVTPE 232
           H DL A  ++     + +++ FGL +    D + Y+ +    P +++        + T +
Sbjct: 163 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 222
Query: 233 SVMYSFGTLLLDLLS 247
           S ++S+G  + +L++
Sbjct: 223 SDVWSYGVTIWELMT 237

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G    G   ++V EYM N +L   L   + Q   M+  
Sbjct: 95  RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSYS 213
             LR    +   + Y  S    ++ DL A  ++ D ++  ++S FGL +   D    +Y+
Sbjct: 155 GMLR---GVGAGMRYL-SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT 210
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +     +  S ++SFG ++ ++L+
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 41/267 (15%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 59  IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 116
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++ EY     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 175
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   R++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 176 QKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 229 VTPESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283
            T +S ++SFG L+ ++  L G     IP      L+++ +      +C           
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------N 286
Query: 284 ELVRLASRCLQYEPRERPNPRSLVTAL 310
           EL  +   C    P +RP  + LV  L
Sbjct: 287 ELYMMMRDCWHAVPSQRPTFKQLVEDL 313

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 90/194 (46%), Gaps = 15/194 (7%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG         +  +A+K  N +  P A  +F++EA  +  + +  L  LL
Sbjct: 24  GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 83
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
           G C     + LV + MP+  L +++ H     +   + L   + IA+ + Y   + R ++
Sbjct: 84  GVCLSPTIQ-LVTQLMPHGCLLEYV-HEHKDNIGSQLLLNWCVQIAKGMMYLEER-RLVH 140
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYL-----RTGRVTPES 233
            DL A  ++     + +++ FGL +    D + Y+ +    P +++        + T +S
Sbjct: 141 RDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQS 200
Query: 234 VMYSFGTLLLDLLS 247
            ++S+G  + +L++
Sbjct: 201 DVWSYGVTIWELMT 214

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V E M N +L   L   + Q   ++  
Sbjct: 62  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV 121
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 122 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G +L +++S
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 6/203 (2%)
Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRV 160
           L E + + ++ +R + +L       D   LV   M    L  H++H        A  +  
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 161 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS---TNLA 217
           A  I   LE    +ER +Y DL    I+ DD  + R+S  GL  +  +G++       + 
Sbjct: 292 AAEICCGLED-LHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277
           +  PE ++  R T     ++ G LL ++++G+  P       I+   ++ L     E ++
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS-PFQQRKKKIKREEVERLVKEVPE-EY 408
Query: 278 SSDEGTELVRLASRCLQYEPRER 300
           S     +   L S+ L  +P ER
Sbjct: 409 SERFSPQARSLCSQLLCKDPAER 431

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/251 (19%), Positives = 105/251 (41%), Gaps = 20/251 (7%)
Query: 76  GKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 133
           GK +   ++AVK    +A  D ++  + E + +  L ++  + NLLG C  G   L++ E
Sbjct: 63  GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 122
Query: 134 YMPNDTLAKHLFHW--------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
           Y     L   L           + +P++    L  +  +A+ + +  SK   ++ D+ A 
Sbjct: 123 YCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK-NCIHRDVAAR 181
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFG 239
            ++  +    ++  FGL ++  +  +Y         + +  PE +     T +S ++S+G
Sbjct: 182 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 241
Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
            LL ++ S    P  +   L+  +  + + D     Q  +     +  +   C   EP  
Sbjct: 242 ILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQ-PAFAPKNIYSIMQACWALEPTH 298
Query: 300 RPNPRSLVTAL 310
           RP  + + + L
Sbjct: 299 RPTFQQICSFL 309

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 32/261 (12%)
Query: 66  GEKAPNVVYKGKLENQ----FRIAVK--RFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
           GE     V +G L+ +     ++AVK  + + S+  +  +FL EA  +    +  +  LL
Sbjct: 43  GEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLL 102
Query: 120 GCCCEGDER-----LLVAEYMPNDTLAKHLFH--WETQPMKWAMR--LRVALHIAEALEY 170
           G C E   +     +++  +M    L  +L +   ET P    ++  L+  + IA  +EY
Sbjct: 103 GVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEY 162
Query: 171 CTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPEYL 224
            +++   L+ DL A   +  DD+   ++ FGL K        R GR     + +   E L
Sbjct: 163 LSNR-NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL 221
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG---QFSSDE 281
                T +S +++FG  + ++ +    P     +         + D  L G   +   D 
Sbjct: 222 ADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN-------HEMYDYLLHGHRLKQPEDC 274
Query: 282 GTELVRLASRCLQYEPRERPN 302
             EL  +   C + +P +RP 
Sbjct: 275 LDELYEIMYSCWRTDPLDRPT 295

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 41/267 (15%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 46  IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 103
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++ EY     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 104 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 162
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 163 QKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 222
Query: 229 VTPESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283
            T +S ++SFG L+ ++  L G     IP      L+++ +      +C           
Sbjct: 223 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------N 273
Query: 284 ELVRLASRCLQYEPRERPNPRSLVTAL 310
           EL  +   C    P +RP  + LV  L
Sbjct: 274 ELYMMMRDCWHAVPSQRPTFKQLVEDL 300

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V E M N +L   L   + Q   ++  
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV 150
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 41/267 (15%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 59  IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 116
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++ EY     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 175
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRV 235
Query: 229 VTPESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283
            T +S ++SFG L+ ++  L G     IP      L+++ +      +C           
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------N 286
Query: 284 ELVRLASRCLQYEPRERPNPRSLVTAL 310
           EL  +   C    P +RP  + LV  L
Sbjct: 287 ELYMMMRDCWHAVPSQRPTFKQLVEDL 313

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  + +L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 68  RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLV 127
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    I+  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 128 GMLR---GISAGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 183
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G ++ +++S
Sbjct: 184 TRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 23/231 (9%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 157
           R FL EA  +GQ  +  + +L G   +    +++ EYM N +L   L        ++ + 
Sbjct: 75  RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVI 131
Query: 158 LRVAL--HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             V +   I   ++Y  S   A++ DL A  I+ + ++  ++S FG+ +   D    +Y+
Sbjct: 132 QLVGMLRGIGSGMKYL-SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 190
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
           T      + +T PE +   + T  S ++S+G ++ +++S    P         D + Q +
Sbjct: 191 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP-------YWDMSNQDV 243
Query: 269 TDSCLEGQF---SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
             +  EG       D    L +L   C Q E  +RP    +V  L  L ++
Sbjct: 244 IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 294

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 111/265 (41%), Gaps = 22/265 (8%)
Query: 66  GEKAPNVVYKGKL-ENQFRIAVKRF-------NRSAWPDARQFLEEARAVGQLRNRRLAN 117
           G+    +V+KG+L +++  +A+K                 ++F  E   +  L +  +  
Sbjct: 28  GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
           L G     +   +V E++P   L   L   +  P+KW+++LR+ L IA  +EY  ++   
Sbjct: 88  LYGLMH--NPPRMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 178 LYH-DLNAYRIVFD--DDVNP---RLSCFGLMKNSRDGRS-YSTNLAFTPPEYLRTGR-- 228
           + H DL +  I     D+  P   +++ FG  + S    S    N  +  PE +      
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 229 VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288
            T ++  YSF  +L  +L+G+   P       + + I  + +  L      D    L  +
Sbjct: 205 YTEKADTYSFAMILYTILTGEG--PFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNV 262
Query: 289 ASRCLQYEPRERPNPRSLVTALVTL 313
              C   +P++RP+   +V  L  L
Sbjct: 263 IELCWSGDPKKRPHFSYIVKELSEL 287

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G    G   ++V EYM N +L   L   + Q   M+  
Sbjct: 95  RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL---MKNSRDGRSY 212
             LR    +   + Y  S    ++ DL A  ++ D ++  ++S FGL   +++  D    
Sbjct: 155 GMLR---GVGAGMRYL-SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT 210
Query: 213 STN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           +T     + +T PE +     +  S ++SFG ++ ++L+
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 76  GKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 133
           GK +   ++AVK    +A  D ++  + E + +  L ++  + NLLG C  G   L++ E
Sbjct: 71  GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 134 YMPNDTLAKHLFHW--------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
           Y     L   L           + +P++    L  +  +A+ + +  SK   ++ D+ A 
Sbjct: 131 YCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK-NCIHRDVAAR 189
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFG 239
            ++  +    ++  FGL ++  +  +Y         + +  PE +     T +S ++S+G
Sbjct: 190 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 249
Query: 240 TLLLDLLS 247
            LL ++ S
Sbjct: 250 ILLWEIFS 257

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 66  GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           G+ A   VY    +     +A+++ N    P     + E   + + +N  + N L     
Sbjct: 29  GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           GDE  +V EY+   +L   +        + A   R  L   +ALE+  S +  ++ D+ +
Sbjct: 89  GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 144
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+   D + +L+ FG        +S  + +  TP    PE +      P+  ++S G 
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 241 LLLDLLSGKHIPP 253
           + ++++ G+  PP
Sbjct: 205 MAIEMIEGE--PP 215

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/282 (21%), Positives = 116/282 (41%), Gaps = 26/282 (9%)
Query: 41  FCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF 100
           +C+ +I+  +     F   +    HG    +V  K  +E  F    +R N        +F
Sbjct: 36  WCDLNIKE-KIGAGSFGTVHRAEWHGS---DVAVKILMEQDFH--AERVN--------EF 81
Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWET--QPMKWAMRL 158
           L E   + +LR+  +   +G   +     +V EY+   +L + L H     + +    RL
Sbjct: 82  LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRL 140
Query: 159 RVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 217
            +A  +A+ + Y  ++   + H DL +  ++ D     ++  FGL +        S   A
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA 200
Query: 218 FTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL 273
            TP    PE LR      +S +YSFG +L +L + +   P   L+    + +  +   C 
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQ--PWGNLN--PAQVVAAVGFKCK 256
Query: 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315
             +   +   ++  +   C   EP +RP+  +++  L  L K
Sbjct: 257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 41/267 (15%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 48  IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 105
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++ EY     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 106 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 164
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 165 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 224
Query: 229 VTPESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283
            T +S ++SFG L+ ++  L G     IP      L+++ +      +C           
Sbjct: 225 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------N 275
Query: 284 ELVRLASRCLQYEPRERPNPRSLVTAL 310
           EL  +   C    P +RP  + LV  L
Sbjct: 276 ELYMMMRDCWHAVPSQRPTFKQLVEDL 302

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 66  GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           G+ A   VY    +     +A+++ N    P     + E   + + +N  + N L     
Sbjct: 29  GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           GDE  +V EY+   +L   +        + A   R  L   +ALE+  S +  ++ D+ +
Sbjct: 89  GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 144
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+   D + +L+ FG        +S  + +  TP    PE +      P+  ++S G 
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 241 LLLDLLSGKHIPP 253
           + ++++ G+  PP
Sbjct: 205 MAIEMIEGE--PP 215

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 41/267 (15%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 59  IDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 116
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++ EY     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 175
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 229 VTPESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283
            T +S ++SFG L+ ++  L G     IP      L+++ +      +C           
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------N 286
Query: 284 ELVRLASRCLQYEPRERPNPRSLVTAL 310
           EL  +   C    P +RP  + LV  L
Sbjct: 287 ELYMMMRDCWHAVPSQRPTFKQLVEDL 313

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 41/267 (15%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 51  IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 108
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++ EY     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 109 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 167
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 168 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 227
Query: 229 VTPESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283
            T +S ++SFG L+ ++  L G     IP      L+++ +      +C           
Sbjct: 228 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------N 278
Query: 284 ELVRLASRCLQYEPRERPNPRSLVTAL 310
           EL  +   C    P +RP  + LV  L
Sbjct: 279 ELYMMMRDCWHAVPSQRPTFKQLVEDL 305

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 111/265 (41%), Gaps = 22/265 (8%)
Query: 66  GEKAPNVVYKGKL-ENQFRIAVKRF-------NRSAWPDARQFLEEARAVGQLRNRRLAN 117
           G+    +V+KG+L +++  +A+K                 ++F  E   +  L +  +  
Sbjct: 28  GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
           L G     +   +V E++P   L   L   +  P+KW+++LR+ L IA  +EY  ++   
Sbjct: 88  LYGLMH--NPPRMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 178 LYH-DLNAYRIVFD--DDVNP---RLSCFGLMKNSRDGRS-YSTNLAFTPPEYLRTGR-- 228
           + H DL +  I     D+  P   +++ F L + S    S    N  +  PE +      
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 229 VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288
            T ++  YSF  +L  +L+G+   P       + + I  + +  L      D    L  +
Sbjct: 205 YTEKADTYSFAMILYTILTGEG--PFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNV 262
Query: 289 ASRCLQYEPRERPNPRSLVTALVTL 313
              C   +P++RP+   +V  L  L
Sbjct: 263 IELCWSGDPKKRPHFSYIVKELSEL 287

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 20/251 (7%)
Query: 66  GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           G+ A   VY    +     +A+++ N    P     + E   + + +N  + N L     
Sbjct: 30  GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 89
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           GDE  +V EY+   +L   +        + A   R  L   +ALE+  S +  ++ D+ +
Sbjct: 90  GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 145
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+   D + +L+ FG        +S  + +  TP    PE +      P+  ++S G 
Sbjct: 146 DNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 241 LLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
           + ++++ G+    +  P  AL LI        T+   E Q             +RCL+ +
Sbjct: 206 MAIEMIEGEPPYLNENPLRALYLIA-------TNGTPELQNPEKLSAIFRDFLNRCLEMD 258
Query: 297 PRERPNPRSLV 307
             +R + + L+
Sbjct: 259 VEKRGSAKELI 269

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 66  GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           G+ A   VY    +     +A+++ N    P     + E   + + +N  + N L     
Sbjct: 29  GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           GDE  +V EY+   +L   +        + A   R  L   +ALE+  S +  ++ D+ +
Sbjct: 89  GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 144
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+   D + +L+ FG        +S  + +  TP    PE +      P+  ++S G 
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 241 LLLDLLSGKHIPP 253
           + ++++ G+  PP
Sbjct: 205 MAIEMIEGE--PP 215

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 41/267 (15%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 59  IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 116
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++ EY     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 175
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRV 235
Query: 229 VTPESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283
            T +S ++SFG L+ ++  L G     IP      L+++ +      +C           
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------N 286
Query: 284 ELVRLASRCLQYEPRERPNPRSLVTAL 310
           EL  +   C    P +RP  + LV  L
Sbjct: 287 ELYMMMRDCWHAVPSQRPTFKQLVEDL 313

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 107/273 (39%), Gaps = 29/273 (10%)
Query: 55  GFAMENIVSEH--GEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPDARQ-FLEEARAV 107
           G A E++V     GE     VY+G   N    +  +AVK   +    D ++ F+ EA  +
Sbjct: 4   GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 63
Query: 108 GQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEA 167
             L +  +  L+G   E +   ++ E  P   L  H        +K    +  +L I +A
Sbjct: 64  KNLDHPHIVKLIGII-EEEPTWIIMELYPYGELG-HYLERNKNSLKVLTLVLYSLQICKA 121
Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP-----PE 222
           + Y  S    ++ D+    I+       +L  FGL +   D   Y  ++   P     PE
Sbjct: 122 MAYLESI-NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 180
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQF 277
            +   R T  S ++ F   + ++LS GK     +     + ++   +     D C     
Sbjct: 181 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC----- 235
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                  L  L +RC  Y+P +RP    LV +L
Sbjct: 236 ----PPVLYTLMTRCWDYDPSDRPRFTELVCSL 264

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 107/273 (39%), Gaps = 29/273 (10%)
Query: 55  GFAMENIVSEH--GEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPDARQ-FLEEARAV 107
           G A E++V     GE     VY+G   N    +  +AVK   +    D ++ F+ EA  +
Sbjct: 20  GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 79
Query: 108 GQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEA 167
             L +  +  L+G   E +   ++ E  P   L  H        +K    +  +L I +A
Sbjct: 80  KNLDHPHIVKLIGII-EEEPTWIIMELYPYGELG-HYLERNKNSLKVLTLVLYSLQICKA 137
Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP-----PE 222
           + Y  S    ++ D+    I+       +L  FGL +   D   Y  ++   P     PE
Sbjct: 138 MAYLESI-NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 196
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQF 277
            +   R T  S ++ F   + ++LS GK     +     + ++   +     D C     
Sbjct: 197 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC----- 251
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                  L  L +RC  Y+P +RP    LV +L
Sbjct: 252 ----PPVLYTLMTRCWDYDPSDRPRFTELVCSL 280

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 107/273 (39%), Gaps = 29/273 (10%)
Query: 55  GFAMENIVSEH--GEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPDARQ-FLEEARAV 107
           G A E++V     GE     VY+G   N    +  +AVK   +    D ++ F+ EA  +
Sbjct: 8   GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 67
Query: 108 GQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEA 167
             L +  +  L+G   E +   ++ E  P   L  H        +K    +  +L I +A
Sbjct: 68  KNLDHPHIVKLIGII-EEEPTWIIMELYPYGELG-HYLERNKNSLKVLTLVLYSLQICKA 125
Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP-----PE 222
           + Y  S    ++ D+    I+       +L  FGL +   D   Y  ++   P     PE
Sbjct: 126 MAYLESI-NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 184
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQF 277
            +   R T  S ++ F   + ++LS GK     +     + ++   +     D C     
Sbjct: 185 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC----- 239
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                  L  L +RC  Y+P +RP    LV +L
Sbjct: 240 ----PPVLYTLMTRCWDYDPSDRPRFTELVCSL 268

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 41/267 (15%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 105 IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 162
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++ EY     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 163 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 221
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 222 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 281
Query: 229 VTPESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283
            T +S ++SFG L+ ++  L G     IP      L+++ +      +C           
Sbjct: 282 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------N 332
Query: 284 ELVRLASRCLQYEPRERPNPRSLVTAL 310
           EL  +   C    P +RP  + LV  L
Sbjct: 333 ELYMMMRDCWHAVPSQRPTFKQLVEDL 359

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 41/267 (15%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 59  IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 116
Query: 129 LLVAEYMPNDTLAKHL-----------FHWETQP---MKWAMRLRVALHIAEALEYCTSK 174
            ++ EY     L ++L           +     P   M +   +     +A  +EY  S 
Sbjct: 117 YVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 175
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRV 235
Query: 229 VTPESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283
            T +S ++SFG L+ ++  L G     IP      L+++ +      +C           
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------N 286
Query: 284 ELVRLASRCLQYEPRERPNPRSLVTAL 310
           EL  +   C    P +RP  + LV  L
Sbjct: 287 ELYMMMRDCWHAVPSQRPTFKQLVEDL 313

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/255 (21%), Positives = 105/255 (41%), Gaps = 24/255 (9%)
Query: 76  GKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 133
           GK +   ++AVK    +A  D ++  + E + +  L ++  + NLLG C  G   L++ E
Sbjct: 71  GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 134 YMPNDTLAKHLFH----WETQP----MKWAMRLRVALH----IAEALEYCTSKERALYHD 181
           Y     L   L       ET P        +  R  LH    +A+ + +  SK   ++ D
Sbjct: 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN-CIHRD 189
Query: 182 LNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVM 235
           + A  ++  +    ++  FGL ++  +  +Y         + +  PE +     T +S +
Sbjct: 190 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 249
Query: 236 YSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295
           +S+G LL ++ S    P  +   L+  +  + + D     Q  +     +  +   C   
Sbjct: 250 WSYGILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQ-PAFAPKNIYSIMQACWAL 306
Query: 296 EPRERPNPRSLVTAL 310
           EP  RP  + + + L
Sbjct: 307 EPTHRPTFQQICSFL 321

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/264 (19%), Positives = 109/264 (41%), Gaps = 33/264 (12%)
Query: 76  GKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 133
           GK +   ++AVK    +A  D ++  + E + +  L ++  + NLLG C  G   L++ E
Sbjct: 56  GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 115
Query: 134 Y----------------MPNDTLA-----KHLFHWETQPMKWAMRLRVALHIAEALEYCT 172
           Y                M   +LA     + L   + +P++    L  +  +A+ + +  
Sbjct: 116 YCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLA 175
Query: 173 SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRT 226
           SK   ++ D+ A  ++  +    ++  FGL ++  +  +Y         + +  PE +  
Sbjct: 176 SK-NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFD 234
Query: 227 GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286
              T +S ++S+G LL ++ S    P  +   L+  +  + + D     Q  +     + 
Sbjct: 235 CVYTVQSDVWSYGILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQ-PAFAPKNIY 291
Query: 287 RLASRCLQYEPRERPNPRSLVTAL 310
            +   C   EP  RP  + + + L
Sbjct: 292 SIMQACWALEPTHRPTFQQICSFL 315

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  + +L G   +    +++ E+M N +L   L   + Q   ++  
Sbjct: 53  RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV 112
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS---Y 212
             LR    IA  ++Y       ++  L A  I+ + ++  ++S FGL +   D  S   Y
Sbjct: 113 GMLR---GIAAGMKYLADMNY-VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 168
Query: 213 STNLA------FTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           ++ L       +T PE ++  + T  S ++S+G ++ +++S
Sbjct: 169 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/251 (20%), Positives = 102/251 (40%), Gaps = 20/251 (7%)
Query: 66  GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           G+ A   VY    +     +A+++ N    P     + E   + + +N  + N L     
Sbjct: 30  GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 89
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           GDE  +V EY+   +L   +        + A   R  L   +ALE+  S +  ++ ++ +
Sbjct: 90  GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRNIKS 145
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+   D + +L+ FG        +S  + +  TP    PE +      P+  ++S G 
Sbjct: 146 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 241 LLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
           + ++++ G+    +  P  AL LI        T+   E Q             +RCL+ +
Sbjct: 206 MAIEMIEGEPPYLNENPLRALYLIA-------TNGTPELQNPEKLSAIFRDFLNRCLEMD 258
Query: 297 PRERPNPRSLV 307
             +R + + L+
Sbjct: 259 VEKRGSAKELI 269

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 28/274 (10%)
Query: 56  FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNR 113
           F   N +++  E     ++KG+ +    I VK      W    +R F EE   +    + 
Sbjct: 9   FKQLNFLTKLNENHSGELWKGRWQGN-DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 114 RLANLLGCCCE--GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC 171
            +  +LG C         L+  +MP  +L   L       +  +  ++ AL +A  + + 
Sbjct: 68  NVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL 127
Query: 172 TSKERAL-YHDLNAYRIVFDDDVNPRLSCFGL-MKNSRDGRSYSTNLAFTPPEYLRTGRV 229
            + E  +  H LN+  ++ D+D+  R+S   +       GR Y+   A+  PE L+    
Sbjct: 128 HTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAP--AWVAPEALQK--- 182
Query: 230 TPESV------MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG---QFSSD 280
            PE        M+SF  LL +L++ + +P     DL    N++      LEG        
Sbjct: 183 KPEDTNRRSADMWSFAVLLWELVT-REVP---FADL---SNMEIGMKVALEGLRPTIPPG 235
Query: 281 EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314
               + +L   C+  +P +RP    +V  L  +Q
Sbjct: 236 ISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 60/282 (21%), Positives = 117/282 (41%), Gaps = 26/282 (9%)
Query: 41  FCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF 100
           +C+ +I+  +     F   +    HG    +V  K  +E  F    +R N        +F
Sbjct: 36  WCDLNIKE-KIGAGSFGTVHRAEWHGS---DVAVKILMEQDFH--AERVN--------EF 81
Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWET--QPMKWAMRL 158
           L E   + +LR+  +   +G   +     +V EY+   +L + L H     + +    RL
Sbjct: 82  LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRL 140
Query: 159 RVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 217
            +A  +A+ + Y  ++   + H +L +  ++ D     ++  FGL +        S + A
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA 200
Query: 218 FTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL 273
            TP    PE LR      +S +YSFG +L +L + +   P   L+    + +  +   C 
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQ--PWGNLN--PAQVVAAVGFKCK 256
Query: 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315
             +   +   ++  +   C   EP +RP+  +++  L  L K
Sbjct: 257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 23/231 (9%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 157
           R FL EA  +GQ  +  + +L G   +    +++ EYM N +L   L        ++ + 
Sbjct: 54  RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVI 110
Query: 158 LRVAL--HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             V +   I   ++Y  S    ++ DL A  I+ + ++  ++S FG+ +   D    +Y+
Sbjct: 111 QLVGMLRGIGSGMKYL-SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 169
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
           T      + +T PE +   + T  S ++S+G ++ +++S    P         D + Q +
Sbjct: 170 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP-------YWDMSNQDV 222
Query: 269 TDSCLEGQF---SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
             +  EG       D    L +L   C Q E  +RP    +V  L  L ++
Sbjct: 223 IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 273

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/246 (20%), Positives = 100/246 (40%), Gaps = 22/246 (8%)
Query: 83  RIAVKRFN-RSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT-- 139
           ++A+KR N         + L+E +A+ Q  +  + +        DE  LV + +   +  
Sbjct: 42  KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 101
Query: 140 -LAKHLF---HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195
            + KH+      ++  +  +    +   + E LEY   K   ++ D+ A  I+  +D + 
Sbjct: 102 DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL-HKNGQIHRDVKAGNILLGEDGSV 160
Query: 196 RLSCFGLMKNSRDGRSYSTN-----LAFTP----PEYLRTGRVTP-ESVMYSFGTLLLDL 245
           +++ FG+      G   + N        TP    PE +   R    ++ ++SFG   ++L
Sbjct: 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 220
Query: 246 LSG----KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
            +G       PP   L L    +  +L     + +     G    ++ S CLQ +P +RP
Sbjct: 221 ATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRP 280
Query: 302 NPRSLV 307
               L+
Sbjct: 281 TAAELL 286

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/246 (20%), Positives = 100/246 (40%), Gaps = 22/246 (8%)
Query: 83  RIAVKRFN-RSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT-- 139
           ++A+KR N         + L+E +A+ Q  +  + +        DE  LV + +   +  
Sbjct: 37  KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 96
Query: 140 -LAKHLF---HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195
            + KH+      ++  +  +    +   + E LEY   K   ++ D+ A  I+  +D + 
Sbjct: 97  DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL-HKNGQIHRDVKAGNILLGEDGSV 155
Query: 196 RLSCFGLMKNSRDGRSYSTN-----LAFTP----PEYLRTGRVTP-ESVMYSFGTLLLDL 245
           +++ FG+      G   + N        TP    PE +   R    ++ ++SFG   ++L
Sbjct: 156 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 215
Query: 246 LSG----KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
            +G       PP   L L    +  +L     + +     G    ++ S CLQ +P +RP
Sbjct: 216 ATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRP 275
Query: 302 NPRSLV 307
               L+
Sbjct: 276 TAAELL 281

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 24/255 (9%)
Query: 76  GKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 133
           GK +   ++AVK    +A  D ++  + E + +  L ++  + NLLG C  G   L++ E
Sbjct: 71  GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 134 YMPNDTLAKHLFH----WETQP----MKWAMRLRVALH----IAEALEYCTSKERALYHD 181
           Y     L   L       ET P           R  LH    +A+ + +  SK   ++ D
Sbjct: 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN-CIHRD 189
Query: 182 LNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVM 235
           + A  ++  +    ++  FGL ++  +  +Y         + +  PE +     T +S +
Sbjct: 190 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 249
Query: 236 YSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295
           +S+G LL ++ S    P  +   L+  +  + + D     Q  +     +  +   C   
Sbjct: 250 WSYGILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQ-PAFAPKNIYSIMQACWAL 306
Query: 296 EPRERPNPRSLVTAL 310
           EP  RP  + + + L
Sbjct: 307 EPTHRPTFQQICSFL 321

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 23/231 (9%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 157
           R FL EA  +GQ  +  + +L G   +    +++ EYM N +L   L        ++ + 
Sbjct: 60  RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVI 116
Query: 158 LRVAL--HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             V +   I   ++Y  S    ++ DL A  I+ + ++  ++S FG+ +   D    +Y+
Sbjct: 117 QLVGMLRGIGSGMKYL-SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 175
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
           T      + +T PE +   + T  S ++S+G ++ +++S    P         D + Q +
Sbjct: 176 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP-------YWDMSNQDV 228
Query: 269 TDSCLEGQF---SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
             +  EG       D    L +L   C Q E  +RP    +V  L  L ++
Sbjct: 229 IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 279

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 110/267 (41%), Gaps = 41/267 (15%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + +LLG C +    
Sbjct: 59  IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IIHLLGACTQDGPL 116
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++ EY     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 175
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 229 VTPESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283
            T +S ++SFG L+ ++  L G     IP      L+++ +      +C           
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------N 286
Query: 284 ELVRLASRCLQYEPRERPNPRSLVTAL 310
           EL  +   C    P +RP  + LV  L
Sbjct: 287 ELYMMMRDCWHAVPSQRPTFKQLVEDL 313

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 83  RIAVKRFNRS--AWPDARQFLE-EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139
           ++A+K  N+   A  D +  +E E   +  LR+  +  L       DE ++V EY  N+ 
Sbjct: 41  KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE- 99
Query: 140 LAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197
               LF +  Q  K + +   R    I  A+EYC  + + ++ DL    ++ D+ +N ++
Sbjct: 100 ----LFDYIVQRDKMSEQEARRFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVKI 154
Query: 198 SCFGLMKNSRDGRSYSTNLA---FTPPEYLRTGRV--TPESVMYSFGTLLLDLL 246
           + FGL     DG    T+     +  PE + +G++   PE  ++S G +L  +L
Sbjct: 155 ADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 207

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 83  RIAVKRFNRS--AWPDARQFLE-EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139
           ++A+K  N+   A  D +  +E E   +  LR+  +  L       DE ++V EY  N+ 
Sbjct: 31  KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE- 89
Query: 140 LAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197
               LF +  Q  K + +   R    I  A+EYC  + + ++ DL    ++ D+ +N ++
Sbjct: 90  ----LFDYIVQRDKMSEQEARRFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVKI 144
Query: 198 SCFGLMKNSRDGRSYSTNLA---FTPPEYLRTGRV--TPESVMYSFGTLLLDLL 246
           + FGL     DG    T+     +  PE + +G++   PE  ++S G +L  +L
Sbjct: 145 ADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 197

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 83  RIAVKRFNRS--AWPDARQFLE-EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139
           ++A+K  N+   A  D +  +E E   +  LR+  +  L       DE ++V EY  N+ 
Sbjct: 40  KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE- 98
Query: 140 LAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197
               LF +  Q  K + +   R    I  A+EYC  + + ++ DL    ++ D+ +N ++
Sbjct: 99  ----LFDYIVQRDKMSEQEARRFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVKI 153
Query: 198 SCFGLMKNSRDGRSYSTNLA---FTPPEYLRTGRV--TPESVMYSFGTLLLDLL 246
           + FGL     DG    T+     +  PE + +G++   PE  ++S G +L  +L
Sbjct: 154 ADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 206

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 109/267 (40%), Gaps = 41/267 (15%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  +  LLG C +    
Sbjct: 59  IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IITLLGACTQDGPL 116
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++ EY     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 175
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 229 VTPESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283
            T +S ++SFG L+ ++  L G     IP      L+++ +      +C           
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------N 286
Query: 284 ELVRLASRCLQYEPRERPNPRSLVTAL 310
           EL  +   C    P +RP  + LV  L
Sbjct: 287 ELYMMMRDCWHAVPSQRPTFKQLVEDL 313

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 109/267 (40%), Gaps = 41/267 (15%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 59  IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 116
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++  Y     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 117 YVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 175
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 229 VTPESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283
            T +S ++SFG L+ ++  L G     IP      L+++ +      +C           
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------N 286
Query: 284 ELVRLASRCLQYEPRERPNPRSLVTAL 310
           EL  +   C    P +RP  + LV  L
Sbjct: 287 ELYMMMRDCWHAVPSQRPTFKQLVEDL 313

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 83  RIAVKRFNRS--AWPDARQFLE-EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139
           ++A+K  N+   A  D +  +E E   +  LR+  +  L       DE ++V EY  N+ 
Sbjct: 35  KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE- 93
Query: 140 LAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197
               LF +  Q  K + +   R    I  A+EYC  + + ++ DL    ++ D+ +N ++
Sbjct: 94  ----LFDYIVQRDKMSEQEARRFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVKI 148
Query: 198 SCFGLMKNSRDGRSYSTNLA---FTPPEYLRTGRV--TPESVMYSFGTLLLDLL 246
           + FGL     DG    T+     +  PE + +G++   PE  ++S G +L  +L
Sbjct: 149 ADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 201

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/244 (20%), Positives = 100/244 (40%), Gaps = 33/244 (13%)
Query: 61  IVSEHGEKAPNVVYKGKL------ENQFRIAVKRF-NRSAWPDARQFLEEARAVGQLRNR 113
            + E GE     VYKG L      E    +A+K   +++  P   +F  EA    +L++ 
Sbjct: 13  FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 72
Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW----------ETQPMKWAMR----LR 159
            +  LLG   +     ++  Y  +  L + L             + + +K A+     + 
Sbjct: 73  NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 160 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST----- 214
           +   IA  +EY +S    ++ DL    ++  D +N ++S  GL +       Y       
Sbjct: 133 LVAQIAAGMEYLSS-HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 215 -NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTL 268
             + +  PE +  G+ + +S ++S+G +L ++ S    P         +++IR+R +   
Sbjct: 192 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC 251
Query: 269 TDSC 272
            D C
Sbjct: 252 PDDC 255

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/244 (20%), Positives = 100/244 (40%), Gaps = 33/244 (13%)
Query: 61  IVSEHGEKAPNVVYKGKL------ENQFRIAVKRF-NRSAWPDARQFLEEARAVGQLRNR 113
            + E GE     VYKG L      E    +A+K   +++  P   +F  EA    +L++ 
Sbjct: 30  FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 89
Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW----------ETQPMKWAMR----LR 159
            +  LLG   +     ++  Y  +  L + L             + + +K A+     + 
Sbjct: 90  NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 149
Query: 160 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST----- 214
           +   IA  +EY +S    ++ DL    ++  D +N ++S  GL +       Y       
Sbjct: 150 LVAQIAAGMEYLSS-HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 215 -NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTL 268
             + +  PE +  G+ + +S ++S+G +L ++ S    P         +++IR+R +   
Sbjct: 209 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC 268
Query: 269 TDSC 272
            D C
Sbjct: 269 PDDC 272

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 109/267 (40%), Gaps = 41/267 (15%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 59  IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 116
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++  Y     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 117 YVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 175
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 229 VTPESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283
            T +S ++SFG L+ ++  L G     IP      L+++ +      +C           
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------N 286
Query: 284 ELVRLASRCLQYEPRERPNPRSLVTAL 310
           EL  +   C    P +RP  + LV  L
Sbjct: 287 ELYMMMRDCWHAVPSQRPTFKQLVEDL 313

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/257 (19%), Positives = 104/257 (40%), Gaps = 26/257 (10%)
Query: 76  GKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 133
           GK +   ++AVK    +A  D ++  + E + +  L ++  + NLLG C  G   L++ E
Sbjct: 71  GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 134 YMPNDTLAKHLFHWETQPMKWAMR--------------LRVALHIAEALEYCTSKERALY 179
           Y     L   L       ++++                L  +  +A+ + +  SK   ++
Sbjct: 131 YCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASK-NCIH 189
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPES 233
            D+ A  ++  +    ++  FGL ++  +  +Y         + +  PE +     T +S
Sbjct: 190 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 249
Query: 234 VMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
            ++S+G LL ++ S    P  +   L+  +  + + D     Q  +     +  +   C 
Sbjct: 250 DVWSYGILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQ-PAFAPKNIYSIMQACW 306
Query: 294 QYEPRERPNPRSLVTAL 310
             EP  RP  + + + L
Sbjct: 307 ALEPTHRPTFQQICSFL 323

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R+FL EA  +GQ  +  +  L G        +++ E+M N  L   L   + Q   ++  
Sbjct: 60  REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV 119
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK----NSRDGRS 211
             LR    IA  + Y  ++   ++ DL A  I+ + ++  ++S FGL +    NS D  +
Sbjct: 120 GMLR---GIASGMRYL-AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD-PT 174
Query: 212 YSTNLA------FTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           Y+++L       +T PE +   + T  S  +S+G ++ +++S
Sbjct: 175 YTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 113/272 (41%), Gaps = 35/272 (12%)
Query: 85  AVKRFNRSAWPD-ARQFLEEARAVGQLRNR-RLANLLGCCCEGDERLLVAEYMPNDTLAK 142
           A+KR    A  D  R F  E   + +L +   + NLLG C       L  EY P+  L  
Sbjct: 56  AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 115
Query: 143 HLFH---WETQP-----------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIV 188
            L      ET P           +     L  A  +A  ++Y + K+  ++ DL A  I+
Sbjct: 116 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNIL 174
Query: 189 FDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFGTLL 242
             ++   +++ FGL   SR    Y        P      E L     T  S ++S+G LL
Sbjct: 175 VGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 231
Query: 243 LDLLSGKHIPP-SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
            +++S    P        + ++  Q      LE   + D+  E+  L  +C + +P ERP
Sbjct: 232 WEIVSLGGTPYCGMTCAELYEKLPQGYR---LEKPLNCDD--EVYDLMRQCWREKPYERP 286
Query: 302 NPRSLVTALVTL--QKDTEVSCFLFSSQFTYA 331
           +   ++ +L  +  ++ T V+  L+  +FTYA
Sbjct: 287 SFAQILVSLNRMLEERKTYVNTTLY-EKFTYA 317

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 113/272 (41%), Gaps = 35/272 (12%)
Query: 85  AVKRFNRSAWPD-ARQFLEEARAVGQLRNR-RLANLLGCCCEGDERLLVAEYMPNDTLAK 142
           A+KR    A  D  R F  E   + +L +   + NLLG C       L  EY P+  L  
Sbjct: 46  AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 105
Query: 143 HLFH---WETQP-----------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIV 188
            L      ET P           +     L  A  +A  ++Y + K+  ++ DL A  I+
Sbjct: 106 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNIL 164
Query: 189 FDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFGTLL 242
             ++   +++ FGL   SR    Y        P      E L     T  S ++S+G LL
Sbjct: 165 VGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 221
Query: 243 LDLLSGKHIPP-SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
            +++S    P        + ++  Q      LE   + D+  E+  L  +C + +P ERP
Sbjct: 222 WEIVSLGGTPYCGMTCAELYEKLPQGYR---LEKPLNCDD--EVYDLMRQCWREKPYERP 276
Query: 302 NPRSLVTALVTL--QKDTEVSCFLFSSQFTYA 331
           +   ++ +L  +  ++ T V+  L+  +FTYA
Sbjct: 277 SFAQILVSLNRMLEERKTYVNTTLY-EKFTYA 307

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 100/237 (42%), Gaps = 27/237 (11%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAM 156
           R FL+E + +  L +  +   +G   + D+RL  + EY+   TL   +   ++Q   W+ 
Sbjct: 52  RTFLKEVKVMRCLEHPNVLKFIGVLYK-DKRLNFITEYIKGGTLRGIIKSMDSQ-YPWSQ 109
Query: 157 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL-------------- 202
           R+  A  IA  + Y  S    ++ DLN++  +  ++ N  ++ FGL              
Sbjct: 110 RVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168
Query: 203 --MKNSRDGRSYST--NLAFTPPEYLRTGRVTPESV-MYSFGTLLLDLLSGKHIPPSHAL 257
             +K     + Y+   N  +  PE +  GR   E V ++SFG +L +++   +  P +  
Sbjct: 169 RSLKKPDRKKRYTVVGNPYWMAPEMI-NGRSYDEKVDVFSFGIVLCEIIGRVNADPDY-- 225
Query: 258 DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314
            L R  +        L+     +       +  RC   +P +RP+   L   L TL+
Sbjct: 226 -LPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 24/235 (10%)
Query: 83  RIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139
           ++AVK  NR    +     +   E + +   R+  +  L        +  +V EY+    
Sbjct: 38  KVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGE 97
Query: 140 LAKHL-FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLS 198
           L  ++  H   + M+     R+   I  A++YC  +   ++ DL    ++ D  +N +++
Sbjct: 98  LFDYICKHGRVEEMEAR---RLFQQILSAVDYC-HRHMVVHRDLKPENVLLDAHMNAKIA 153
Query: 199 CFGLMKNSRDGRSYSTNLA---FTPPEYLRTGRV--TPESVMYSFGTLLLDLLSGKHIPP 253
            FGL     DG    T+     +  PE + +GR+   PE  ++S G +L  LL G  +P 
Sbjct: 154 DFGLSNMMSDGEFLRTSCGSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGT-LP- 210
Query: 254 SHALDLIRDRNIQTLTDSCLEGQFSSDE--GTELVRLASRCLQYEPRERPNPRSL 306
                   D ++ TL      G F   E     +  L    LQ +P +R   + +
Sbjct: 211 ------FDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDI 259

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 19/201 (9%)
Query: 84  IAVKRFNRSAW-PDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 141
           +A+K  +++   P + Q    E R +  L +  +  L           L+ EY     + 
Sbjct: 40  VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVF 99
Query: 142 KHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200
            +L  H   +  +   + R    I  A++YC  K R ++ DL A  ++ D D+N +++ F
Sbjct: 100 DYLVAHGRMKEKEARSKFR---QIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADF 155
Query: 201 GLMKNSRDGRSYSTNLAFTP---PEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHA 256
           G       G    T     P   PE  +  +   PE  ++S G +L  L+SG     S  
Sbjct: 156 GFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLP 210
Query: 257 LDLIRDRNIQTLTDSCLEGQF 277
            D    +N++ L +  L G++
Sbjct: 211 FD---GQNLKELRERVLRGKY 228

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 20/196 (10%)
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIV 188
            +  E+    TL + +     + +   + L +   I + ++Y  SK + ++ DL    I 
Sbjct: 110 FIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLIHRDLKPSNIF 168
Query: 189 FDDDVNPRLSCFGLMKNSR-DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
             D    ++  FGL+ + + DG   RS  T L +  PE + +     E  +Y+ G +L +
Sbjct: 169 LVDTKQVKIGDFGLVTSLKNDGKRTRSKGT-LRYMSPEQISSQDYGKEVDLYALGLILAE 227
Query: 245 LLSGKHIPPSHALDLIRD--RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
           LL        H  D   +  +    L D  +   F   E T L +L S+    +P +RPN
Sbjct: 228 LL--------HVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSK----KPEDRPN 275
Query: 303 PRSLVTALVTLQKDTE 318
              ++  L   +K  E
Sbjct: 276 TSEILRTLTVWKKSPE 291

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R+FL EA  +GQ  +  +  L G        +++ E+M N  L   L   + Q   ++  
Sbjct: 62  REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV 121
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK----NSRDGRS 211
             LR    IA  + Y  ++   ++ DL A  I+ + ++  ++S FGL +    NS D   
Sbjct: 122 GMLR---GIASGMRYL-AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTE 177
Query: 212 YST-----NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
            S+      + +T PE +   + T  S  +S+G ++ +++S
Sbjct: 178 TSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/269 (20%), Positives = 110/269 (40%), Gaps = 27/269 (10%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 21  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 80
Query: 120 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C     + L+ + MP     D + +H  +  +Q +     L   + IAE + Y   + 
Sbjct: 81  GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAEGMNYLEDR- 133
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 229
           R ++ DL A  ++     + +++ FGL K    + + Y       P +++    +     
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 193
Query: 230 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
           T +S ++S+G  + +L++    P     D I    I ++ +             ++  + 
Sbjct: 194 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 249
Query: 290 SRCLQYEPRERPNPRSLVTALVTLQKDTE 318
            +C   +   RP  R L+     + +D +
Sbjct: 250 VKCWMIDADSRPKFRELIIEFSKMARDPQ 278

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 19/201 (9%)
Query: 84  IAVKRFNRSAW-PDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 141
           +AVK  +++   P + Q    E R +  L +  +  L           LV EY     + 
Sbjct: 43  VAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 102
Query: 142 KHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200
            +L  H   +  +   + R    I  A++YC  K   ++ DL A  ++ D D+N +++ F
Sbjct: 103 DYLVAHGRMKEKEARAKFR---QIVSAVQYCHQK-YIVHRDLKAENLLLDGDMNIKIADF 158
Query: 201 GLMKNSRDGRSYSTNLAFTP---PEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHA 256
           G       G    T     P   PE  +  +   PE  ++S G +L  L+SG     S  
Sbjct: 159 GFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLP 213
Query: 257 LDLIRDRNIQTLTDSCLEGQF 277
            D    +N++ L +  L G++
Sbjct: 214 FD---GQNLKELRERVLRGKY 231

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	359
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-61
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-60
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	7e-59
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	5e-26
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-25
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-23
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-21
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-21
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-20
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-20
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-19
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-18
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-18
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-18
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	6e-18
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	6e-18
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-17
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-17
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-17
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-17
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-17
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-17
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	6e-17
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-16
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-16
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	7e-16
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-15
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	9e-15
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-14
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-14
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-14
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-14
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-14
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	5e-14
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	5e-14
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	8e-14
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	9e-14
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	9e-14
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-13
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-13
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-13
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-13
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-13
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	3e-13
4aoj_A	329	High affinity nerve growth factor receptor; transf	5e-13
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	9e-13
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-12
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-12
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	3e-12
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	4e-12
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	6e-12
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	6e-12
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	7e-12
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-11
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-11
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-11
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	4e-11
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	9e-11
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-10
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-10
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	3e-10
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	3e-10
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	4e-10
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	6e-10
3q4u_A	301	Activin receptor type-1; structural genomics conso	8e-10
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-09
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-09
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-09
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-09
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-09
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-08
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-08
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-08
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	7e-08
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-07
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	5e-07
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-06
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-06
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-06
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	6e-06
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	8e-06
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	9e-06
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-05
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-05
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-05
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-05
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-05
2a19_B	284	Interferon-induced, double-stranded RNA-activated	3e-05
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-05
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	4e-05
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-05
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	8e-05
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-04
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-04
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-04
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-04
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-04
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	4e-04
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	5e-04
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	5e-04
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	5e-04
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	6e-04
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	7e-04
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	7e-04
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	7e-04
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	8e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  199 bits (509), Expect = 1e-61
 Identities = 87/310 (28%), Positives = 141/310 (45%), Gaps = 31/310 (10%)

Query: 26  DVENEEKPGVD--NVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFR 83
           DV  EE P V    +  F   S+  L+ A+  F+ +NI+   G      VYKG+L +   
Sbjct: 3   DVPAEEDPEVHLGQLKRF---SLRELQVASDNFSNKNIL---GRGGFGKVYKGRLADGTL 56

Query: 84  IAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
           +AVKR           QF  E   +    +R L  L G C    ERLLV  YM N ++A 
Sbjct: 57  VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 116

Query: 143 HLF--HWETQPMKWAMRLRVALHIAEALEY--CTSKERALYHDLNAYRIVFDDDVNPRLS 198
            L        P+ W  R R+AL  A  L Y       + ++ D+ A  I+ D++    + 
Sbjct: 117 CLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176

Query: 199 CFGLMKNSRDGRSY-STNLAFT----PPEYLRTGRVTPESVMYSFGTLLLDLLSGK---- 249
            FGL K      ++ +T +  T     PEYL TG+ + ++ ++ +G +LL+L++G+    
Sbjct: 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236

Query: 250 -HIPP--------SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
                             L++++ ++ L D  L+G +  +E  +L+++A  C Q  P ER
Sbjct: 237 LARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMER 296

Query: 301 PNPRSLVTAL 310
           P    +V  L
Sbjct: 297 PKMSEVVRML 306

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  195 bits (498), Expect = 2e-60
 Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 44/318 (13%)

Query: 28  ENEEKPGVD-NVPVFCEYSIETLRTATSGFAMENIVSEH---GEKAPNVVYKGKLENQFR 83
           EN+     D     F   S   L+  T+ F    I       GE    VVYKG + N   
Sbjct: 1   ENKSLEVSDTRFHSF---SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-T 56

Query: 84  IAVKRFNRSAWPDA----RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139
           +AVK+             +QF +E + + + ++  L  LLG   +GD+  LV  YMPN +
Sbjct: 57  VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS 116

Query: 140 LAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR------IVFDDD 192
           L   L   + T P+ W MR ++A   A  + +       L+ + + +R      I+ D+ 
Sbjct: 117 LLDRLSCLDGTPPLSWHMRCKIAQGAANGINF-------LHENHHIHRDIKSANILLDEA 169

Query: 193 VNPRLSCFGLMK-NSRDGRSY-STNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLL 246
              ++S FGL + + +  ++  ++ +  T     PE L  G +TP+S +YSFG +LL+++
Sbjct: 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEII 228

Query: 247 SGK-----HIPPSHALD-----LIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
           +G      H  P   LD        ++ I+   D  +     S     +  +AS+CL  +
Sbjct: 229 TGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEK 287

Query: 297 PRERPNPRSLVTALVTLQ 314
             +RP+ + +   L  + 
Sbjct: 288 KNKRPDIKKVQQLLQEMT 305

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  192 bits (490), Expect = 7e-59
 Identities = 78/317 (24%), Positives = 140/317 (44%), Gaps = 28/317 (8%)

Query: 14  GSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVV 73
           GS+Y +A     D  +                +  L  AT+ F  + ++   G      V
Sbjct: 2   GSKYSKATNSINDALSSSYLVPFESYRV---PLVDLEEATNNFDHKFLI---GHGVFGKV 55

Query: 74  YKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133
           YKG L +  ++A+KR    +     +F  E   +   R+  L +L+G C E +E +L+ +
Sbjct: 56  YKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYK 115

Query: 134 YMPNDTLAKHLF--HWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
           YM N  L +HL+     T  M W  RL + +  A  L Y     RA+ H D+ +  I+ D
Sbjct: 116 YMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL--HTRAIIHRDVKSINILLD 173

Query: 191 DDVNPRLSCFGLMK-NSRDGRSY-STNLAFTP----PEYLRTGRVTPESVMYSFGTLLLD 244
           ++  P+++ FG+ K  +   +++ ST +  T     PEY   GR+T +S +YSFG +L +
Sbjct: 174 ENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFE 233

Query: 245 LLSGK----HIPPSH-------ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
           +L  +       P         A++   +  ++ + D  L  +   +   +    A +CL
Sbjct: 234 VLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCL 293

Query: 294 QYEPRERPNPRSLVTAL 310
                +RP+   ++  L
Sbjct: 294 ALSSEDRPSMGDVLWKL 310

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  104 bits (261), Expect = 5e-26
 Identities = 48/262 (18%), Positives = 95/262 (36%), Gaps = 34/262 (12%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
            ++KG+ +    I VK      W     R F EE   +    +  +  +LG C       
Sbjct: 25  ELWKGRWQGN-DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83

Query: 130 L--VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
              +  +MP  +L   L       +  +  ++ AL +A  + +  + E  +    LN+  
Sbjct: 84  PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRS 143

Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSY-STNLAFTP----PEYLRTGRVTPESV---MYSF 238
           ++ D+D+  R+S   +        S+ S    + P    PE L+            M+SF
Sbjct: 144 VMIDEDMTARISMADV------KFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSF 197

Query: 239 GTLLLDLLSGK----HIPPSHALDLIRDRNIQ-TLTDSCLEGQFSSDEGTELVRLASRCL 293
             LL +L++ +     +        +    ++ T+                + +L   C+
Sbjct: 198 AVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISP---------HVSKLMKICM 248

Query: 294 QYEPRERPNPRSLVTALVTLQK 315
             +P +RP    +V  L  +Q 
Sbjct: 249 NEDPAKRPKFDMIVPILEKMQD 270

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  103 bits (258), Expect = 2e-25
 Identities = 49/322 (15%), Positives = 105/322 (32%), Gaps = 57/322 (17%)

Query: 43  EYSIETLRTATSGFAMENIVSE--HGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF 100
           +   E L   +    +  + +    G      V+K +L N+  +AVK F      D + +
Sbjct: 13  DLGTENLYFQSMPLQLLEVKARGRFGC-----VWKAQLLNE-YVAVKIFPIQ---DKQSW 63

Query: 101 LEEA--RAVGQLRNRRLANLLGCCCEGD----ERLLVAEYMPNDTLAKHLFHWETQPMKW 154
             E    ++  +++  +   +G    G     +  L+  +    +L+  L       + W
Sbjct: 64  QNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NVVSW 120

Query: 155 AMRLRVALHIAEALEY--------CTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKN 205
                +A  +A  L Y            + A+ H D+ +  ++  +++   ++ FGL   
Sbjct: 121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180

Query: 206 SRDGRSYSTNLAFT------PPEYLRTGRVTPESV-----MYSFGTLLLDLLSGK----- 249
              G+S               PE L               MY+ G +L +L S       
Sbjct: 181 FEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADG 240

Query: 250 -----------HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT-ELVRLASRCLQYEP 297
                       I    +L+ +++  +       L   +    G   L      C  ++ 
Sbjct: 241 PVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDA 300

Query: 298 RERPNPRSLVTALVTLQKDTEV 319
             R +   +   +  +Q+ T +
Sbjct: 301 EARLSAGCVGERITQMQRLTNI 322

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 97.8 bits (244), Expect = 2e-23
 Identities = 50/258 (19%), Positives = 106/258 (41%), Gaps = 23/258 (8%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
            V++ +      +AVK      +      +FL E   + +LR+  +   +G   +     
Sbjct: 52  TVHRAEWHGS-DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110

Query: 130 LVAEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRI 187
           +V EY+   +L + L      + +    RL +A  +A+ + Y  ++   + H +L +  +
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNL 170

Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLL 243
           + D     ++  FGL +        S + A TP    PE LR      +S +YSFG +L 
Sbjct: 171 LVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILW 230

Query: 244 DLLSGK----HIPPSHALDLIRDRNIQ-TLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298
           +L + +    ++ P+  +  +  +  +  +  +            ++  +   C   EP 
Sbjct: 231 ELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNP---------QVAAIIEGCWTNEPW 281

Query: 299 ERPNPRSLVTALVTLQKD 316
           +RP+  +++  L  L K 
Sbjct: 282 KRPSFATIMDLLRPLIKS 299

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 91.6 bits (228), Expect = 2e-21
 Identities = 55/266 (20%), Positives = 109/266 (40%), Gaps = 38/266 (14%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL- 129
           VYKGK      +AVK  N +A      + F  E   + + R+  +   +G       +L 
Sbjct: 40  VYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA--PQLA 95

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIV 188
           +V ++    +L  HL H      +    + +A   A  ++Y  +K   + H DL +  I 
Sbjct: 96  IVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIF 152

Query: 189 FDDDVNPRLSCFGL--MKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESV---MYSFG 239
             +D   ++  FGL   K+   G      L+ +     PE +R     P S    +Y+FG
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212

Query: 240 TLLLDLLSGK-----HIPPSHALDLI----RDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290
            +L +L++G+            ++++       ++  +  +C +          + RL +
Sbjct: 213 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPK---------RMKRLMA 263

Query: 291 RCLQYEPRERPNPRSLVTALVTLQKD 316
            CL+ +  ERP+   ++  +  L ++
Sbjct: 264 ECLKKKRDERPSFPRILAEIEELARE 289

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 91.2 bits (227), Expect = 5e-21
 Identities = 48/259 (18%), Positives = 102/259 (39%), Gaps = 31/259 (11%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VV K K   +  +A+K+       + + F+ E R + ++ +  +  L G C   +   LV
Sbjct: 23  VVCKAKWRAK-DVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLV 77

Query: 132 AEYMPNDTLAKHLFHWETQP-MKWAMRLRVALHIAEALEYC-TSKERALYH-DLNAYRIV 188
            EY    +L   L   E  P    A  +   L  ++ + Y  + + +AL H DL    ++
Sbjct: 78  MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 137

Query: 189 FDDD-VNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLL 243
                   ++  FG    + D +++ TN   +     PE       + +  ++S+G +L 
Sbjct: 138 LVAGGTVLKICDFGT---ACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILW 194

Query: 244 DLLSGK------HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
           ++++ +        P    +  + +     L  +  +          +  L +RC   +P
Sbjct: 195 EVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK---------PIESLMTRCWSKDP 245

Query: 298 RERPNPRSLVTALVTLQKD 316
            +RP+   +V  +  L + 
Sbjct: 246 SQRPSMEEIVKIMTHLMRY 264

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 88.9 bits (221), Expect = 2e-20
 Identities = 53/266 (19%), Positives = 95/266 (35%), Gaps = 40/266 (15%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDA----RQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
            VY+        +AVK        D         +EA+    L++  +  L G C +   
Sbjct: 22  KVYRAFWIGD-EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC-TSKERALYH-DLNAY 185
             LV E+     L + L     + +   + +  A+ IA  + Y        + H DL + 
Sbjct: 81  LCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSS 137

Query: 186 RIVFDDDVNPRLSC--------FGLMKNSRD-GRSYSTNLAFTP----PEYLRTGRVTPE 232
            I+    V              FGL   +R+  R+   + A       PE +R    +  
Sbjct: 138 NILILQKVENGDLSNKILKITDFGL---AREWHRTTKMSAAGAYAWMAPEVIRASMFSKG 194

Query: 233 SVMYSFGTLLLDLLSGK----HIPPSHALDLIRDRNIQ-TLTDSCLEGQFSSDEGTELVR 287
           S ++S+G LL +LL+G+     I        +    +   +  +C E            +
Sbjct: 195 SDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPE---------PFAK 245

Query: 288 LASRCLQYEPRERPNPRSLVTALVTL 313
           L   C   +P  RP+  +++  L T+
Sbjct: 246 LMEDCWNPDPHSRPSFTNILDQLTTI 271

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 88.5 bits (220), Expect = 3e-20
 Identities = 55/266 (20%), Positives = 106/266 (39%), Gaps = 42/266 (15%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDA-------RQFLEEARAVGQLRNRRLANLLGCCC 123
           +V+KG+ ++++  +A+K                 ++F  E   +  L +  +  L G   
Sbjct: 34  LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH 93

Query: 124 EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DL 182
                 +V E++P   L   L   +  P+KW+++LR+ L IA  +EY  ++   + H DL
Sbjct: 94  NPP--RMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDL 150

Query: 183 NAYRIVFDDDVNPRLSC-----FGLMKNSRDGRSYSTNLAFTP----PEYL--RTGRVTP 231
            +  I           C     FGL   S+      + L        PE +       T 
Sbjct: 151 RSPNIFLQSLDENAPVCAKVADFGL---SQQSVHSVSGLLGNFQWMAPETIGAEEESYTE 207

Query: 232 ESVMYSFGTLLLDLLSGK----HIPPSHA--LDLIRDRNIQ-TLTDSCLEGQFSSDEGTE 284
           ++  YSF  +L  +L+G+             +++IR+  ++ T+ + C            
Sbjct: 208 KADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPP---------R 258

Query: 285 LVRLASRCLQYEPRERPNPRSLVTAL 310
           L  +   C   +P++RP+   +V  L
Sbjct: 259 LRNVIELCWSGDPKKRPHFSYIVKEL 284

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 83.7 bits (207), Expect = 2e-18
 Identities = 56/332 (16%), Positives = 105/332 (31%), Gaps = 68/332 (20%)

Query: 43  EYSIETLRTATSGFAMENIVSE--HGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF 100
           E +            +  ++    +G      VYKG L+ +  +AVK F+   + + + F
Sbjct: 2   EAAASEPSLDLDNLKLLELIGRGRYGA-----VYKGSLDERP-VAVKVFS---FANRQNF 52

Query: 101 LEEAR--AVGQLRNRRLANLLGCCCEGD-----ERLLVAEYMPNDTLAKHLFHWETQPMK 153
           + E     V  + +  +A  +            E LLV EY PN +L K+L         
Sbjct: 53  INEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL---HTSD 109

Query: 154 WAMRLRVALHIAEALEY-------CTSKERALYH-DLNAYRIVFDDDVNPRLSCFGL--- 202
           W    R+A  +   L Y           + A+ H DLN+  ++  +D    +S FGL   
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169

Query: 203 -----MKNSRDGRSYSTNLAFTP----PEYLR-------TGRVTPESVMYSFGTLLLDLL 246
                +    +  + + +   T     PE L              +  MY+ G +  ++ 
Sbjct: 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229

Query: 247 SGK------HIPPSHAL----DLIRDRNIQTLTDS-CLEGQ-------FSSDEGT--ELV 286
                       P + +    ++      + +      E Q       +  +      L 
Sbjct: 230 MRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLK 289

Query: 287 RLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
                C   +   R   +     +  L    E
Sbjct: 290 ETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 82.7 bits (205), Expect = 3e-18
 Identities = 58/261 (22%), Positives = 110/261 (42%), Gaps = 24/261 (9%)

Query: 72  VVYKGKLENQ-FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
            VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       +
Sbjct: 28  EVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVF 189
           + E+M    L  +L     Q +   + L +A  I+ A+EY   K     H DL A   + 
Sbjct: 87  ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLV 144

Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLD 244
            ++   +++ FGL +        +   A     +T PE L   + + +S +++FG LL +
Sbjct: 145 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204

Query: 245 LLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
           + +    P      S   +L+         + C E         ++  L   C Q+ P +
Sbjct: 205 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPE---------KVYELMRACWQWNPSD 255

Query: 300 RPNPRSLVTALVTLQKDTEVS 320
           RP+   +  A  T+ +++ +S
Sbjct: 256 RPSFAEIHQAFETMFQESSIS 276

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 82.8 bits (205), Expect = 4e-18
 Identities = 45/269 (16%), Positives = 87/269 (32%), Gaps = 39/269 (14%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
            VY G+   +  +A++  +     +   + F  E  A  Q R+  +   +G C       
Sbjct: 48  QVYHGRWHGE--VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA 105

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIV 188
           ++       TL   +       +      ++A  I + + Y  +K   + H DL +  + 
Sbjct: 106 IITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYLHAK--GILHKDLKSKNVF 162

Query: 189 FDDDVNPRLSCFGL--MKNSRDGRSYSTNLAFTP-------PEYLRTGRVTPESVM---- 235
           +D+     ++ FGL  +            L           PE +R      E       
Sbjct: 163 YDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFS 221

Query: 236 -----YSFGTLLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286
                ++ GT+  +L + +      P    +  +       L+            G E+ 
Sbjct: 222 KHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQ--------IGMGKEIS 273

Query: 287 RLASRCLQYEPRERPNPRSLVTALVTLQK 315
            +   C  +E  ERP    L+  L  L K
Sbjct: 274 DILLFCWAFEQEERPTFTKLMDMLEKLPK 302

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 82.4 bits (204), Expect = 6e-18
 Identities = 48/272 (17%), Positives = 91/272 (33%), Gaps = 38/272 (13%)

Query: 73  VYKGKLENQFR-IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
             K         + +K   R      R FL+E + +  L +  +   +G   +      +
Sbjct: 26  AIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EY+   TL   +         W+ R+  A  IA  + Y  S    + H DLN++  +  
Sbjct: 86  TEYIKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVR 142

Query: 191 DDVNPRLSCFGL--------------MKNSRDGRSYSTNLAFTP----PEYLRTGRVTPE 232
           ++ N  ++ FGL                  +  R     +   P    PE +       +
Sbjct: 143 ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEK 202

Query: 233 SVMYSFGTLLLDLLSGKHIPP-----SHALDLIRDRNI-QTLTDSCLEGQFSSDEGTELV 286
             ++SFG +L +++   +  P     +    L     + +    +C              
Sbjct: 203 VDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPP---------SFF 253

Query: 287 RLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
            +  RC   +P +RP+   L   L TL+    
Sbjct: 254 PITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 83.7 bits (207), Expect = 6e-18
 Identities = 57/260 (21%), Positives = 110/260 (42%), Gaps = 24/260 (9%)

Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 236 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            E+M    L  +L     Q +   + L +A  I+ A+EY   K     H +L A   +  
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVG 352

Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           ++   +++ FGL +        +   A     +T PE L   + + +S +++FG LL ++
Sbjct: 353 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412

Query: 246 LSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
            +    P      S   +L+         + C E         ++  L   C Q+ P +R
Sbjct: 413 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPE---------KVYELMRACWQWNPSDR 463

Query: 301 PNPRSLVTALVTLQKDTEVS 320
           P+   +  A  T+ +++ +S
Sbjct: 464 PSFAEIHQAFETMFQESSIS 483

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 82.9 bits (205), Expect = 1e-17
 Identities = 64/259 (24%), Positives = 101/259 (38%), Gaps = 24/259 (9%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+ G      R+A+K            FL+EA+ + +LR+ +L  L     E +   +V 
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 191
           EYM   +L   L     + ++    + +A  IA  + Y         H DL A  I+  +
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 315

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
           ++  +++ FGL +   D    +   A     +T PE    GR T +S ++SFG LL +L 
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375

Query: 247 SGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
           +   +P         LD +           C E          L  L  +C + EP ERP
Sbjct: 376 TKGRVPYPGMVNREVLDQVERGYRMPCPPECPE---------SLHDLMCQCWRKEPEERP 426

Query: 302 NPRSLVTALVTLQKDTEVS 320
               L   L      TE  
Sbjct: 427 TFEYLQAFLEDYFTSTEPQ 445

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 82.3 bits (204), Expect = 1e-17
 Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 26/258 (10%)

Query: 73  VYKGKLENQ-FRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           V+ G+L      +AVK    +  PD +  FL+EAR + Q  +  +  L+G C +     +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVF 189
           V E +        L   E   ++    L++    A  +EY  SK     H DL A   + 
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLV 246

Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAF------TPPEYLRTGRVTPESVMYSFGTLLL 243
            +    ++S FG+ +   DG   ++          T PE L  GR + ES ++SFG LL 
Sbjct: 247 TEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLW 306

Query: 244 DLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298
           +  S    P          + +         + C +          + RL  +C  YEP 
Sbjct: 307 ETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPD---------AVFRLMEQCWAYEPG 357

Query: 299 ERPNPRSLVTALVTLQKD 316
           +RP+  ++   L +++K 
Sbjct: 358 QRPSFSTIYQELQSIRKR 375

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 80.7 bits (200), Expect = 2e-17
 Identities = 64/250 (25%), Positives = 99/250 (39%), Gaps = 28/250 (11%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-L 130
            V  G      ++AVK     A   A+ FL EA  + QLR+  L  LLG   E    L +
Sbjct: 36  DVMLGDYRGN-KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVF 189
           V EYM   +L  +L       +     L+ +L + EA+EY         H DL A  ++ 
Sbjct: 93  VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLV 150

Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESVMYSFGTLLLDL 245
            +D   ++S FGL   +++  S           T PE LR  + + +S ++SFG LL ++
Sbjct: 151 SEDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207

Query: 246 LS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
            S G+     IP    +  +         D C            +  +   C   +   R
Sbjct: 208 YSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPP---------AVYEVMKNCWHLDAAMR 258

Query: 301 PNPRSLVTAL 310
           P+   L   L
Sbjct: 259 PSFLQLREQL 268

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 82.0 bits (203), Expect = 2e-17
 Identities = 64/255 (25%), Positives = 100/255 (39%), Gaps = 28/255 (10%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LV 131
           V  G      ++AVK     A   A+ FL EA  + QLR+  L  LLG   E    L +V
Sbjct: 209 VMLGDYRGN-KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM   +L  +L       +     L+ +L + EA+EY         H DL A  ++  
Sbjct: 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVS 323

Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESVMYSFGTLLLDLL 246
           +D   ++S FGL   +++  S           T PE LR  + + +S ++SFG LL ++ 
Sbjct: 324 EDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 380

Query: 247 S-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
           S G+     IP    +  +         D C            +  +   C   +   RP
Sbjct: 381 SFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPP---------AVYDVMKNCWHLDAATRP 431

Query: 302 NPRSLVTALVTLQKD 316
               L   L  ++  
Sbjct: 432 TFLQLREQLEHIRTH 446

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 82.2 bits (203), Expect = 3e-17
 Identities = 64/259 (24%), Positives = 101/259 (38%), Gaps = 24/259 (9%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+ G      R+A+K            FL+EA+ + +LR+ +L  L     E +   +V 
Sbjct: 283 VWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 191
           EYM   +L   L     + ++    + +A  IA  + Y         H DL A  I+  +
Sbjct: 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 398

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
           ++  +++ FGL +   D    +   A     +T PE    GR T +S ++SFG LL +L 
Sbjct: 399 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 458

Query: 247 SGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
           +   +P         LD +           C E          L  L  +C + EP ERP
Sbjct: 459 TKGRVPYPGMVNREVLDQVERGYRMPCPPECPE---------SLHDLMCQCWRKEPEERP 509

Query: 302 NPRSLVTALVTLQKDTEVS 320
               L   L      TE  
Sbjct: 510 TFEYLQAFLEDYFTSTEPQ 528

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 81.3 bits (201), Expect = 4e-17
 Identities = 57/264 (21%), Positives = 102/264 (38%), Gaps = 38/264 (14%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+        ++AVK     +      FL EA  +  L++ +L  L     + +   ++ 
Sbjct: 204 VWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 261

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 191
           E+M   +L   L   E         +  +  IAE + +   +     H DL A  I+   
Sbjct: 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSA 319

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
            +  +++ FGL +   D    +   A     +T PE +  G  T +S ++SFG LL++++
Sbjct: 320 SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 379

Query: 247 SGKHIP-PSHALDLIRDRNIQTLT-----------DSCLEGQFSSDEGTELVRLASRCLQ 294
           +   IP P  +       N + +            ++C E         EL  +  RC +
Sbjct: 380 TYGRIPYPGMS-------NPEVIRALERGYRMPRPENCPE---------ELYNIMMRCWK 423

Query: 295 YEPRERPNPRSLVTALVTLQKDTE 318
             P ERP    + + L      TE
Sbjct: 424 NRPEERPTFEYIQSVLDDFYTATE 447

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 78.8 bits (195), Expect = 6e-17
 Identities = 50/256 (19%), Positives = 109/256 (42%), Gaps = 24/256 (9%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VV  GK + Q+ +AVK     +     +F +EA+ + +L + +L    G C +     +V
Sbjct: 23  VVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EY+ N  L  +L     + ++ +  L +   + E + +  S +    H DL A   + D
Sbjct: 82  TEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVD 138

Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDL 245
            D+  ++S FG+ +   D +  S+        ++ PE     + + +S +++FG L+ ++
Sbjct: 139 RDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 198

Query: 246 LSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
            S   +P      S  +  +   +         +          + ++   C    P +R
Sbjct: 199 FSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASD---------TIYQIMYSCWHELPEKR 249

Query: 301 PNPRSLVTALVTLQKD 316
           P  + L++++  L++ 
Sbjct: 250 PTFQQLLSSIEPLREK 265

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 77.3 bits (191), Expect = 2e-16
 Identities = 58/279 (20%), Positives = 105/279 (37%), Gaps = 37/279 (13%)

Query: 73  VYKGKL--------ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           ++KG           ++  + +K  +++    +  F E A  + +L ++ L    G C  
Sbjct: 24  IFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
           GDE +LV E++   +L  +L       +    +L VA  +A A+ +       L H ++ 
Sbjct: 84  GDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAAAMHFLEENT--LIHGNVC 140

Query: 184 AYRI-VFDDDVNPR-------LSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRV-TPESV 234
           A  I +  ++           LS  G+             + + PPE +   +     + 
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATD 200

Query: 235 MYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
            +SFGT L ++ SG   P         L    DR            Q  + +  EL  L 
Sbjct: 201 KWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR-----------HQLPAPKAAELANLI 249

Query: 290 SRCLQYEPRERPNPRSLVTALVTLQKDTEVSCFLFSSQF 328
           + C+ YEP  RP+ R+++  L +L     V         
Sbjct: 250 NNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGSHHHHH 288

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 76.5 bits (189), Expect = 4e-16
 Identities = 63/257 (24%), Positives = 106/257 (41%), Gaps = 24/257 (9%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+ G      ++AVK   + +      FL EA  + QL+++RL  L     + +   ++ 
Sbjct: 29  VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 191
           EYM N +L   L       +     L +A  IAE + +   +     H DL A  I+  D
Sbjct: 87  EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSD 144

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
            ++ +++ FGL +   D    +   A     +T PE +  G  T +S ++SFG LL +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204

Query: 247 SGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
           +   IP         +  +         D+C E         EL +L   C +  P +RP
Sbjct: 205 THGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRP 255

Query: 302 NPRSLVTALVTLQKDTE 318
               L + L      TE
Sbjct: 256 TFDYLRSVLEDFFTATE 272

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 75.7 bits (187), Expect = 7e-16
 Identities = 54/259 (20%), Positives = 98/259 (37%), Gaps = 32/259 (12%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           +V+ G   N+ ++A+K     A      F+EEA  + +L + +L  L G C E     LV
Sbjct: 23  LVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            E+M +  L+ +L           + L + L + E + Y       + H DL A   +  
Sbjct: 82  TEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEAC--VIHRDLAARNCL-- 136

Query: 191 DDVNPRLSC----FGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTL 241
             V          FG+ +   D +  S+        +  PE     R + +S ++SFG L
Sbjct: 137 --VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 194

Query: 242 LLDLLSGKHIP-P----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
           + ++ S   IP      S  ++ I                        + ++ + C +  
Sbjct: 195 MWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAST---------HVYQIMNHCWRER 245

Query: 297 PRERPNPRSLVTALVTLQK 315
           P +RP    L+  L  + +
Sbjct: 246 PEDRPAFSRLLRQLAEIAE 264

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 74.6 bits (184), Expect = 2e-15
 Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 24/253 (9%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VV  GK   Q+ +A+K     +     +F+EEA+ +  L + +L  L G C +     ++
Sbjct: 39  VVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N  L  +L     +     + L +   + EA+EY  SK+    H DL A   + +
Sbjct: 98  TEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVN 154

Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           D    ++S FGL +   D    S+  +     ++PPE L   + + +S +++FG L+ ++
Sbjct: 155 DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214

Query: 246 LSGKHIP-P----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
            S   +P      S   + I             E         ++  +   C   +  ER
Sbjct: 215 YSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE---------KVYTIMYSCWHEKADER 265

Query: 301 PNPRSLVTALVTL 313
           P  + L++ ++ +
Sbjct: 266 PTFKILLSNILDV 278

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 74.5 bits (183), Expect = 9e-15
 Identities = 52/263 (19%), Positives = 97/263 (36%), Gaps = 29/263 (11%)

Query: 73  VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
           V++G           +A+K          R+ FL+EA  + Q  +  +  L+G     + 
Sbjct: 406 VHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENP 464

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
             ++ E      L   L   +   +  A  +  A  ++ AL Y  SK     H D+ A  
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESKR--FVHRDIAARN 521

Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTL 241
           ++   +   +L  FGL +   D   Y  +       +  PE +   R T  S ++ FG  
Sbjct: 522 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 581

Query: 242 LLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
           + ++L     P      +  +  I +     +  +C            L  L ++C  Y+
Sbjct: 582 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYD 632

Query: 297 PRERPNPRSLVTALVTLQKDTEV 319
           P  RP    L   L T+ ++ ++
Sbjct: 633 PSRRPRFTELKAQLSTILEEEKL 655

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 71.9 bits (177), Expect = 2e-14
 Identities = 59/266 (22%), Positives = 105/266 (39%), Gaps = 32/266 (12%)

Query: 73  VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
           VY G+     +N+ + A+K  +R       + FL E   +  L +  +  L+G     + 
Sbjct: 37  VYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG 96

Query: 128 RLL-VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
               +  YM +  L + +   +  P    + +   L +A  +EY   ++    H DL A 
Sbjct: 97  LPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARGMEYLAEQK--FVHRDLAAR 153

Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF--------TPPEYLRTGRVTPESVMYS 237
             + D+    +++ FGL ++  D   YS             T  E L+T R T +S ++S
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWS 213

Query: 238 FGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292
           FG LL +LL+ G     HI P      +         + C +          L ++  +C
Sbjct: 214 FGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPD---------SLYQVMQQC 264

Query: 293 LQYEPRERPNPRSLVTALVTLQKDTE 318
            + +P  RP  R LV  +  +     
Sbjct: 265 WEADPAVRPTFRVLVGEVEQIVSALL 290

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 51/263 (19%), Positives = 96/263 (36%), Gaps = 29/263 (11%)

Query: 72  VVYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
            V++G           +A+K          R+ FL+EA  + Q  +  +  L+G     +
Sbjct: 30  DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITEN 88

Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
              ++ E      L   L   +      ++ +  A  ++ AL Y  SK     H D+ A 
Sbjct: 89  PVWIIMELCTLGELRSFLQVRKYSLDLASL-ILYAYQLSTALAYLESKR--FVHRDIAAR 145

Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGT 240
            ++   +   +L  FGL +   D   Y  +       +  PE +   R T  S ++ FG 
Sbjct: 146 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 205

Query: 241 LLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295
            + ++L     P      +  +  I +     +  +C            L  L ++C  Y
Sbjct: 206 CMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAY 256

Query: 296 EPRERPNPRSLVTALVTLQKDTE 318
           +P  RP    L   L T+ ++ +
Sbjct: 257 DPSRRPRFTELKAQLSTILEEEK 279

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 71.9 bits (177), Expect = 2e-14
 Identities = 57/261 (21%), Positives = 100/261 (38%), Gaps = 38/261 (14%)

Query: 73  VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
           VY G L      +   AVK  NR         FL E   +    +  + +LLG C   + 
Sbjct: 41  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100

Query: 128 -RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
             L+V  YM +  L   + +    P    + +   L +A+ ++Y  SK+    H DL A 
Sbjct: 101 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASKK--FVHRDLAAR 157

Query: 186 RIVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAF-----TPPEYLRTGRVTPESV 234
             + D+    +++ FGL   +RD         ++   A         E L+T + T +S 
Sbjct: 158 NCMLDEKFTVKVADFGL---ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSD 214

Query: 235 MYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
           ++SFG LL +L++ G      +        +         + C +          L  + 
Sbjct: 215 VWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------PLYEVM 265

Query: 290 SRCLQYEPRERPNPRSLVTAL 310
            +C   +   RP+   LV+ +
Sbjct: 266 LKCWHPKAEMRPSFSELVSRI 286

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 71.9 bits (177), Expect = 2e-14
 Identities = 57/282 (20%), Positives = 110/282 (39%), Gaps = 38/282 (13%)

Query: 73  VYKGKLENQF------RIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
           VY+G  +         R+A+K  N +A    R  FL EA  + +     +  LLG   +G
Sbjct: 41  VYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100

Query: 126 DERLLVAEYMPNDTLAKHL--------FHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
              L++ E M    L  +L         +    P   +  +++A  IA+ + Y  + +  
Sbjct: 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-- 158

Query: 178 LYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPEYLRTGRVT 230
             H DL A   +  +D   ++  FG+ ++  +   Y              PE L+ G  T
Sbjct: 159 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 218

Query: 231 PESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285
             S ++SFG +L ++ +  +     +     L  + +  +    D+C +          L
Sbjct: 219 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------ML 269

Query: 286 VRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVSCFLFSSQ 327
             L   C QY P+ RP+   +++++    +        + S+
Sbjct: 270 FELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSE 311

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 71.2 bits (175), Expect = 4e-14
 Identities = 52/278 (18%), Positives = 100/278 (35%), Gaps = 45/278 (16%)

Query: 73  VYKGKL----ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
           V + +L     +  ++AVK          D  +FL EA  + +  +  +A L+G      
Sbjct: 39  VREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98

Query: 127 ER------LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
            +      +++  +M +      L           +     +R  + IA  +EY +S+  
Sbjct: 99  AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN- 157

Query: 177 ALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY---STNLAF----TPPEYLRT 226
              H DL A   +  +D+   ++ FGL   SR      Y                E L  
Sbjct: 158 -FIHRDLAARNCMLAEDMTVCVADFGL---SRKIYSGDYYRQGCASKLPVKWLALESLAD 213

Query: 227 GRVTPESVMYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
              T  S +++FG  + ++++ G+     I  +   + +   N       C+E       
Sbjct: 214 NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECME------- 266

Query: 282 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
             E+  L  +C   +P++RP+   L   L  +     V
Sbjct: 267 --EVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSV 302

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 71.2 bits (175), Expect = 5e-14
 Identities = 59/270 (21%), Positives = 103/270 (38%), Gaps = 39/270 (14%)

Query: 73  VYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
           VYKG L     + +  +A+K          R  FL EA  +GQ  +  +  L G   +  
Sbjct: 60  VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119

Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
             +++ EYM N  L K L   + +     + + +   IA  ++Y  +      H DL A 
Sbjct: 120 PMMIITEYMENGALDKFLREKDGEFSVLQL-VGMLRGIAAGMKYLANM--NYVHRDLAAR 176

Query: 186 RIVFDDDVNPRLSC----FGL---MKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESV 234
            I+    VN  L C    FGL   +++  +    ++        T PE +   + T  S 
Sbjct: 177 NIL----VNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASD 232

Query: 235 MYSFGTLLLDLLSGKHIP-P----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
           ++SFG ++ ++++    P         +  I D         C            + +L 
Sbjct: 233 VWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPS---------AIYQLM 283

Query: 290 SRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
            +C Q E   RP    +V+ L  L +  + 
Sbjct: 284 MQCWQQERARRPKFADIVSILDKLIRAPDS 313

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 70.8 bits (174), Expect = 5e-14
 Identities = 55/269 (20%), Positives = 96/269 (35%), Gaps = 38/269 (14%)

Query: 72  VVYKGKL----ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
            V  G+L    +    +A+K           R FL EA  +GQ  +  +  L G    G 
Sbjct: 64  EVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR 123

Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
             ++V EYM N +L   L   + Q       + +   +   + Y +       H DL A 
Sbjct: 124 LAMIVTEYMENGSLDTFLRTHDGQF-TIMQLVGMLRGVGAGMRYLSDL--GYVHRDLAAR 180

Query: 186 RIVFDDDVNPRLSC----FGL---MKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESV 234
            ++    V+  L C    FGL   +++  D    +T        T PE +     +  S 
Sbjct: 181 NVL----VDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASD 236

Query: 235 MYSFGTLLLDLLSGKHIP-P----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
           ++SFG ++ ++L+    P         +  + +         C            L +L 
Sbjct: 237 VWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPH---------ALHQLM 287

Query: 290 SRCLQYEPRERPNPRSLVTALVTLQKDTE 318
             C   +  +RP    +V+ L  L +  E
Sbjct: 288 LDCWHKDRAQRPRFSQIVSVLDALIRSPE 316

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 70.9 bits (174), Expect = 8e-14
 Identities = 58/269 (21%), Positives = 99/269 (36%), Gaps = 40/269 (14%)

Query: 73  VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
           V  G+L    + +  +A+K          R+ FL EA  +GQ  +  +  L G   +   
Sbjct: 61  VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY-H-DLNAY 185
            ++V EYM N +L   L   + Q       + +   IA  ++Y +      Y H DL A 
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQF-TVIQLVGMLRGIASGMKYLSDMG---YVHRDLAAR 176

Query: 186 RIVFDDDVNPRLSC----FGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESV 234
            I+    +N  L C    FGL +   D       +         T PE +   + T  S 
Sbjct: 177 NIL----INSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232

Query: 235 MYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
           ++S+G +L +++S    P         +  + +         C            L +L 
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA---------ALYQLM 283

Query: 290 SRCLQYEPRERPNPRSLVTALVTLQKDTE 318
             C Q +   RP    +V+ L  L ++  
Sbjct: 284 LDCWQKDRNNRPKFEQIVSILDKLIRNPG 312

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 70.5 bits (173), Expect = 9e-14
 Identities = 59/278 (21%), Positives = 98/278 (35%), Gaps = 46/278 (16%)

Query: 73  VYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
           VY+G++          ++AVK             FL EA  + +  ++ +   +G   + 
Sbjct: 87  VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146

Query: 126 DERLLVAEYMPNDTLAKHL---FHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYH 180
             R ++ E M    L   L       +QP   AM   L VA  IA   +Y         H
Sbjct: 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIH 204

Query: 181 -DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF----TPPEYLRT 226
            D+ A R        P        FG+   +RD     Y              PPE    
Sbjct: 205 RDIAA-RNCLLTCPGPGRVAKIGDFGM---ARDIYRAGYYRKGGCAMLPVKWMPPEAFME 260

Query: 227 GRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
           G  T ++  +SFG LL ++ S G            L+ +          +C         
Sbjct: 261 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG------- 313

Query: 282 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
              + R+ ++C Q++P +RPN   ++  +    +D +V
Sbjct: 314 --PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 349

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 70.1 bits (172), Expect = 9e-14
 Identities = 54/279 (19%), Positives = 97/279 (34%), Gaps = 41/279 (14%)

Query: 72  VVYKGKLE-----NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
            V   + +         +AVK+   S     R F  E   +  L++  +    G C    
Sbjct: 56  SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115

Query: 127 ER--LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
            R   L+ EY+P  +L  +L   + + +     L+    I + +EY  +K     H DL 
Sbjct: 116 RRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYLGTKR--YIHRDLA 172

Query: 184 AYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMY 236
              I+ +++   ++  FGL K     + Y               PE L   + +  S ++
Sbjct: 173 TRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVW 232

Query: 237 SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV----RLA--- 289
           SFG +L +L +      S   + +R            +GQ       EL+    RL    
Sbjct: 233 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDK------QGQMIVFHLIELLKNNGRLPRPD 286

Query: 290 ----------SRCLQYEPRERPNPRSLVTALVTLQKDTE 318
                     + C      +RP+ R L   +  ++    
Sbjct: 287 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 70.0 bits (172), Expect = 1e-13
 Identities = 56/278 (20%), Positives = 96/278 (34%), Gaps = 46/278 (16%)

Query: 73  VYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
           VY+G++          ++AVK             FL EA  + +  ++ +   +G   + 
Sbjct: 46  VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105

Query: 126 DERLLVAEYMPNDTLAKHL-----FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
             R ++ E M    L   L        +   +     L VA  IA   +Y         H
Sbjct: 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIH 163

Query: 181 -DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF----TPPEYLRT 226
            D+ A R        P        FG+   +RD    SY              PPE    
Sbjct: 164 RDIAA-RNCLLTCPGPGRVAKIGDFGM---ARDIYRASYYRKGGCAMLPVKWMPPEAFME 219

Query: 227 GRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
           G  T ++  +SFG LL ++ S G            L+ +          +C         
Sbjct: 220 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG------- 272

Query: 282 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
              + R+ ++C Q++P +RPN   ++  +    +D +V
Sbjct: 273 --PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 308

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 69.2 bits (170), Expect = 2e-13
 Identities = 55/283 (19%), Positives = 97/283 (34%), Gaps = 49/283 (17%)

Query: 72  VVYKGKLE-----NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
            V   + +         +AVK+   S     R F  E   +  L++  +    G C    
Sbjct: 25  SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 84

Query: 127 ER--LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
            R   L+ EY+P     D L KH    +   +     L+    I + +EY  +K     H
Sbjct: 85  RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTKR--YIH 137

Query: 181 -DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPE 232
            DL    I+ +++   ++  FGL K     + +               PE L   + +  
Sbjct: 138 RDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVA 197

Query: 233 SVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV----RL 288
           S ++SFG +L +L +      S   + +R            +GQ       EL+    RL
Sbjct: 198 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK------QGQMIVFHLIELLKNNGRL 251

Query: 289 A-------------SRCLQYEPRERPNPRSLVTALVTLQKDTE 318
                         + C      +RP+ R L   +  ++ +  
Sbjct: 252 PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 69.3 bits (170), Expect = 2e-13
 Identities = 60/278 (21%), Positives = 96/278 (34%), Gaps = 43/278 (15%)

Query: 73  VYKGKLEN-----QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
           V     +         +AVK     A P  R  + +E   +  L +  +    GCC +  
Sbjct: 47  VSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG 106

Query: 127 ER--LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
                LV EY+P     D L +H              L  A  I E + Y  ++     H
Sbjct: 107 AASLQLVMEYVPLGSLRDYLPRHSIGLAQL-------LLFAQQICEGMAYLHAQH--YIH 157

Query: 181 -DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPE 232
            DL A  ++ D+D   ++  FGL K   +G  Y     +         PE L+  +    
Sbjct: 158 RDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYA 217

Query: 233 SVMYSFGTLLLDLLS--GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG-------- 282
           S ++SFG  L +LL+       P      +       +T   L      + G        
Sbjct: 218 SDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL--ERGERLPRPDK 275

Query: 283 --TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
              E+  L   C + E   RP   +L+  L T+ +  +
Sbjct: 276 CPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 69.2 bits (170), Expect = 2e-13
 Identities = 53/276 (19%), Positives = 100/276 (36%), Gaps = 44/276 (15%)

Query: 73  VYKGKL----ENQFRIAVK--RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
           V +G L        ++AVK  + + S+  +  +FL EA  +    +  +  LLG C E  
Sbjct: 50  VMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109

Query: 127 -----ERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
                + +++  +M        L         + +     L+  + IA  +EY +++   
Sbjct: 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-- 167

Query: 178 LYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY---STNLAF----TPPEYLRTG 227
             H DL A   +  DD+   ++ FGL   S+      Y                E L   
Sbjct: 168 FLHRDLAARNCMLRDDMTVCVADFGL---SKKIYSGDYYRQGRIAKMPVKWIAIESLADR 224

Query: 228 RVTPESVMYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282
             T +S +++FG  + ++ + G      +      D +   +     + CL+        
Sbjct: 225 VYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLD-------- 276

Query: 283 TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
            EL  +   C + +P +RP    L   L  L +   
Sbjct: 277 -ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 70.0 bits (171), Expect = 3e-13
 Identities = 51/264 (19%), Positives = 94/264 (35%), Gaps = 30/264 (11%)

Query: 72  VVYKGKLEN---QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
            V +G       Q  +A+K   +       +  + EA+ + QL N  +  L+G  C+ + 
Sbjct: 351 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEA 409

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
            +LV E      L K L     + +  +    +   ++  ++Y   K     H +L A  
Sbjct: 410 LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARN 466

Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFG 239
           ++  +    ++S FGL K      SY T        L +  PE +   + +  S ++S+G
Sbjct: 467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 526

Query: 240 TLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294
             + + LS    P         +  I           C           EL  L S C  
Sbjct: 527 VTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWI 577

Query: 295 YEPRERPNPRSLVTALVTLQKDTE 318
           Y+  +RP+  ++   +        
Sbjct: 578 YKWEDRPDFLTVEQRMRACYYSLA 601

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 69.0 bits (169), Expect = 3e-13
 Identities = 56/261 (21%), Positives = 100/261 (38%), Gaps = 38/261 (14%)

Query: 73  VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
           VY G L      +   AVK  NR         FL E   +    +  + +LLG C   + 
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 164

Query: 128 -RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
             L+V  YM +  L   + +    P    + +   L +A+ +++  SK+    H DL A 
Sbjct: 165 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASKK--FVHRDLAAR 221

Query: 186 RIVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAF-----TPPEYLRTGRVTPESV 234
             + D+    +++ FGL   +RD         ++   A         E L+T + T +S 
Sbjct: 222 NCMLDEKFTVKVADFGL---ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 278

Query: 235 MYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
           ++SFG LL +L++ G      +        +         + C +          L  + 
Sbjct: 279 VWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------PLYEVM 329

Query: 290 SRCLQYEPRERPNPRSLVTAL 310
            +C   +   RP+   LV+ +
Sbjct: 330 LKCWHPKAEMRPSFSELVSRI 350

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 68.1 bits (167), Expect = 5e-13
 Identities = 63/285 (22%), Positives = 101/285 (35%), Gaps = 56/285 (19%)

Query: 73  VYKGKLENQF------RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
           V+  +  N         +AVK    ++    + F  EA  +  L+++ +    G C EG 
Sbjct: 57  VFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116

Query: 127 ERLLVAEYMPNDTLAKHL-------------FHWETQPMKWAMRLRVALHIAEALEYCTS 173
             L+V EYM +  L + L                   P+     L VA  +A  + Y   
Sbjct: 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG 176

Query: 174 KERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF----T 219
                 H DL   R      V   L      FG+   SRD     Y              
Sbjct: 177 LH--FVHRDLAT-RNCL---VGQGLVVKIGDFGM---SRDIYSTDYYRVGGRTMLPIRWM 227

Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLE 274
           PPE +   + T ES ++SFG +L ++ + GK     +  + A+D I          +C  
Sbjct: 228 PPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPP 287

Query: 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
                    E+  +   C Q EP++R + + +   L  L +   V
Sbjct: 288 ---------EVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPV 323

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 67.3 bits (165), Expect = 9e-13
 Identities = 50/265 (18%), Positives = 96/265 (36%), Gaps = 31/265 (11%)

Query: 72  VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
            VYKG       + +  +A+K    +  P A +  L+EA  +  + N  +  LLG  C  
Sbjct: 30  TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88

Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 184
               L+ + MP   L  ++       +     L   + IA+ + Y   +   L H DL A
Sbjct: 89  STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPEYLRTGRVTPESVMYSF 238
             ++     + +++ FGL K          +            E +     T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205

Query: 239 GTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
           G  + +L++ G      IP S    ++           C           ++  +  +C 
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTI---------DVYMIMRKCW 256

Query: 294 QYEPRERPNPRSLVTALVTLQKDTE 318
             +   RP  R L+     + +D +
Sbjct: 257 MIDADSRPKFRELIIEFSKMARDPQ 281

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 66.9 bits (164), Expect = 1e-12
 Identities = 58/281 (20%), Positives = 100/281 (35%), Gaps = 51/281 (18%)

Query: 73  VYKGKLEN------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
           V+  +  N      +  +AVK          + F  EA  +  L++  +    G C +GD
Sbjct: 31  VFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 90

Query: 127 ERLLVAEYMPN--------------DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 172
             ++V EYM +                L           +  +  L +A  IA  + Y  
Sbjct: 91  PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA 150

Query: 173 SKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRDGRSYS--TNLAF----TPP 221
           S+     H DL   R      V   L      FG+ ++      Y    +        PP
Sbjct: 151 SQH--FVHRDLAT-RNCL---VGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP 204

Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQ 276
           E +   + T ES ++SFG +L ++ + GK     +  +  ++ I    +      C +  
Sbjct: 205 ESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPK-- 262

Query: 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317
                  E+  +   C Q EP++R N + +   L  L K T
Sbjct: 263 -------EVYDVMLGCWQREPQQRLNIKEIYKILHALGKAT 296

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 66.1 bits (162), Expect = 2e-12
 Identities = 55/263 (20%), Positives = 100/263 (38%), Gaps = 29/263 (11%)

Query: 72  VVYKGKLEN----QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
            VY+G   N    +  +AVK   +    D ++ F+ EA  +  L +  +  L+G   E +
Sbjct: 27  EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIEEE 85

Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
              ++ E  P   L  +L   +       + +  +L I +A+ Y  S      H D+   
Sbjct: 86  PTWIIMELYPYGELGHYLERNKNSLKVLTL-VLYSLQICKAMAYLESIN--CVHRDIAVR 142

Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGT 240
            I+       +L  FGL +   D   Y  ++      +  PE +   R T  S ++ F  
Sbjct: 143 NILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAV 202

Query: 241 LLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295
            + ++LS    P         + ++   +     D C            L  L +RC  Y
Sbjct: 203 CMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPP---------VLYTLMTRCWDY 253

Query: 296 EPRERPNPRSLVTALVTLQKDTE 318
           +P +RP    LV +L  + +  +
Sbjct: 254 DPSDRPRFTELVCSLSDVYQMEK 276

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 65.4 bits (160), Expect = 3e-12
 Identities = 54/264 (20%), Positives = 98/264 (37%), Gaps = 32/264 (12%)

Query: 72  VVYKGKLENQFR---IAVK--RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
            V KG  + +     +AVK  +   +      + L EA  + QL N  +  ++G  CE +
Sbjct: 32  TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIG-ICEAE 90

Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
             +LV E      L K+L   + + +K    + +   ++  ++Y         H DL A 
Sbjct: 91  SWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAAR 146

Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMYSF 238
            ++       ++S FGL K  R   +Y    T+  +      PE +   + + +S ++SF
Sbjct: 147 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 206

Query: 239 GTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
           G L+ +  S    P      S    ++           C           E+  L + C 
Sbjct: 207 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR---------EMYDLMNLCW 257

Query: 294 QYEPRERPNPRSLVTALVTLQKDT 317
            Y+   RP   ++   L     D 
Sbjct: 258 TYDVENRPGFAAVELRLRNYYYDV 281

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 65.4 bits (160), Expect = 4e-12
 Identities = 50/265 (18%), Positives = 97/265 (36%), Gaps = 31/265 (11%)

Query: 72  VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
            VYKG       + +  +A+K    +  P A +  L+EA  +  + N  +  LLG  C  
Sbjct: 30  TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88

Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 184
               L+ + MP   L  ++       +     L   + IA+ + Y   +   L H DL A
Sbjct: 89  STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSF 238
             ++     + +++ FGL K                 + +   E +     T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205

Query: 239 GTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
           G  + +L++ G      IP S    ++           C           ++  +  +C 
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTI---------DVYMIMVKCW 256

Query: 294 QYEPRERPNPRSLVTALVTLQKDTE 318
             +   RP  R L+     + +D +
Sbjct: 257 MIDADSRPKFRELIIEFSKMARDPQ 281

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 64.6 bits (158), Expect = 6e-12
 Identities = 50/268 (18%), Positives = 92/268 (34%), Gaps = 38/268 (14%)

Query: 72  VVYKGKL---ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
            V +G     + Q  +A+K   +       +  + EA+ + QL N  +  L+G  C+ + 
Sbjct: 25  SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEA 83

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
            +LV E      L K L     + +  +    +   ++  ++Y   K     H DL A  
Sbjct: 84  LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARN 140

Query: 187 IVFDDDVNPRLSC----FGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVM 235
           ++    +  R       FGL K      SY    +   +      PE +   + +  S +
Sbjct: 141 VL----LVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDV 196

Query: 236 YSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290
           +S+G  + + LS    P         +  I           C           EL  L S
Sbjct: 197 WSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMS 247

Query: 291 RCLQYEPRERPNPRSLVTALVTLQKDTE 318
            C  Y+  +RP+  ++   +        
Sbjct: 248 DCWIYKWEDRPDFLTVEQRMRACYYSLA 275

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 64.7 bits (158), Expect = 6e-12
 Identities = 44/265 (16%), Positives = 94/265 (35%), Gaps = 31/265 (11%)

Query: 72  VVYKGKLENQFR-----IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
            V+KG    +       + +K     +   + Q   +   A+G L +  +  LLG  C G
Sbjct: 28  TVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG-LCPG 86

Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 184
               LV +Y+P  +L  H+       +   + L   + IA+ + Y       + H +L A
Sbjct: 87  SSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAA 143

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSF 238
             ++       +++ FG+                   + +   E +  G+ T +S ++S+
Sbjct: 144 RNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 203

Query: 239 GTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
           G  + +L++ G      +  +   DL+           C           ++  +  +C 
Sbjct: 204 GVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTI---------DVYMVMVKCW 254

Query: 294 QYEPRERPNPRSLVTALVTLQKDTE 318
             +   RP  + L      + +D  
Sbjct: 255 MIDENIRPTFKELANEFTRMARDPP 279

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 64.8 bits (158), Expect = 7e-12
 Identities = 52/292 (17%), Positives = 99/292 (33%), Gaps = 54/292 (18%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL---GCCCEGDER- 128
           V+ GK   + ++AVK F      +   +  E   + Q    R  N+L       +G    
Sbjct: 53  VWMGKWRGE-KVAVKVFF---TTEEASWFRE-TEIYQTVLMRHENILGFIAADIKGTGSW 107

Query: 129 ---LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY------CTSKERALY 179
               L+ +Y  N +L  +L   ++  +     L++A      L +       T  + A+ 
Sbjct: 108 TQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA 164

Query: 180 H-DLNAYRIVFDDDVNPRLSCFGL----MKNSRDGRSYSTNLAFTP----PEYLRTGRVT 230
           H DL +  I+   +    ++  GL    + ++ +          T     PE L    + 
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD-ESLN 223

Query: 231 PESV-------MYSFGTLLLDLLSGKHI--------PPSHALDLIRDRNIQTLTDSCLEG 275
                      MYSFG +L ++               P H L              C++ 
Sbjct: 224 RNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKK 283

Query: 276 Q-------FSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
                   +SSDE   ++ +L + C  + P  R     +   L  + +  ++
Sbjct: 284 LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 63.1 bits (154), Expect = 2e-11
 Identities = 57/278 (20%), Positives = 104/278 (37%), Gaps = 45/278 (16%)

Query: 73  VYKGKLENQF---RIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDE 127
           V K +++        A+KR    A  D  + F  E   + +L  +  + NLLG C     
Sbjct: 41  VLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 100

Query: 128 RLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTS 173
             L  EY P+  L   L               +     +     L  A  +A  ++Y + 
Sbjct: 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 160

Query: 174 KERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPEYLRT 226
           K+    H DL A  I+  ++   +++ FGL   SR    Y   T           E L  
Sbjct: 161 KQ--FIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNY 215

Query: 227 GRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
              T  S ++S+G LL +++S G      +  +   + +          +C +       
Sbjct: 216 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDD------- 268

Query: 282 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
             E+  L  +C + +P ERP+   ++ +L  + ++ + 
Sbjct: 269 --EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 60/297 (20%), Positives = 106/297 (35%), Gaps = 50/297 (16%)

Query: 73  VYKGKL--------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCC 122
           V   +             ++AVK     A        + E   +  +   + + NLLG C
Sbjct: 85  VVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144

Query: 123 CEGDERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEAL 168
            +     ++ EY     L ++L               H   + +     +  A  +A  +
Sbjct: 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM 204

Query: 169 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPP 221
           EY  SK+    H DL A  ++  +D   +++ FGL ++      Y  +TN         P
Sbjct: 205 EYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 262

Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQ 276
           E L     T +S ++SFG LL ++ + G      +P      L+++ +      +C    
Sbjct: 263 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTN-- 320

Query: 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL---VTLQKDTEVSCFLFSSQFTY 330
                  EL  +   C    P +RP  + LV  L   V L  + E+  +       Y
Sbjct: 321 -------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGYYHHHHHHDY 370

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 61.8 bits (151), Expect = 4e-11
 Identities = 54/275 (19%), Positives = 98/275 (35%), Gaps = 52/275 (18%)

Query: 73  VYKGKLENQF------RIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
           VYKG L           +A+K     A    R+ F  EA    +L++  +  LLG   + 
Sbjct: 25  VYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD 84

Query: 126 DERLLVAEYMPN--------------DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC 171
               ++  Y  +              D  +          ++    + +   IA  +EY 
Sbjct: 85  QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL 144

Query: 172 TSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRDGRSYSTNLA------FTP 220
           +S    + H DL A R V    V  +L+      GL +       Y           +  
Sbjct: 145 SSHH--VVHKDL-ATRNVL---VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMA 198

Query: 221 PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHA----LDLIRDRNIQTLTDSCLEG 275
           PE +  G+ + +S ++S+G +L ++ S    P   ++    +++IR+R +    D C   
Sbjct: 199 PEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPA- 257

Query: 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                    +  L   C    P  RP  + + + L
Sbjct: 258 --------WVYALMIECWNEFPSRRPRFKDIHSRL 284

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 61.9 bits (151), Expect = 4e-11
 Identities = 50/275 (18%), Positives = 101/275 (36%), Gaps = 45/275 (16%)

Query: 73  VYKGKLE-----NQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
           V   + +        ++AVK     +  +      +E   +  L +  +    G C E  
Sbjct: 37  VELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96

Query: 127 ER--LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
                L+ E++P+ +L ++L   + + +    +L+ A+ I + ++Y  S++    H DL 
Sbjct: 97  GNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYLGSRQ--YVHRDLA 153

Query: 184 AYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMY 236
           A  ++ + +   ++  FGL K     + Y     +         PE L   +    S ++
Sbjct: 154 ARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVW 213

Query: 237 SFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV----RLAS- 290
           SFG  L +LL+         AL L               GQ +       +    RL   
Sbjct: 214 SFGVTLHELLTYCDSDSSPMALFLKMIGPTH--------GQMTVTRLVNTLKEGKRLPCP 265

Query: 291 ------------RCLQYEPRERPNPRSLVTALVTL 313
                       +C +++P  R + ++L+     L
Sbjct: 266 PNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 61.2 bits (149), Expect = 9e-11
 Identities = 53/274 (19%), Positives = 101/274 (36%), Gaps = 47/274 (17%)

Query: 73  VYKGKL--------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCC 122
           V   +         +    +AVK     A        + E   +  + +++ + NLLG C
Sbjct: 51  VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110

Query: 123 CEGDERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEAL 168
            +     ++ EY     L ++L                   + M +   +     +A  +
Sbjct: 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 170

Query: 169 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPP 221
           EY  S++    H DL A  ++  ++   +++ FGL ++  +   Y  +TN         P
Sbjct: 171 EYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228

Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQ 276
           E L     T +S ++SFG L+ ++ + G      IP      L+++ +      +C    
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTN-- 286

Query: 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                  EL  +   C    P +RP  + LV  L
Sbjct: 287 -------ELYMMMRDCWHAVPSQRPTFKQLVEDL 313

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 60.9 bits (148), Expect = 1e-10
 Identities = 47/292 (16%), Positives = 99/292 (33%), Gaps = 54/292 (18%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL---GCCCEGD--- 126
           V++GK   +  +AVK F+     + R +  E   + Q    R  N+L       + +   
Sbjct: 58  VWRGKWRGE-EVAVKIFS---SREERSWFRE-AEIYQTVMLRHENILGFIAADNKDNGTW 112

Query: 127 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY------CTSKERALY 179
            +  LV++Y  + +L  +L       +     +++AL  A  L +       T  + A+ 
Sbjct: 113 TQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 169

Query: 180 H-DLNAYRIVFDDDVNPRLSCFGL----MKNSRDGRSYSTNLAFTP----PEYLRTGRVT 230
           H DL +  I+   +    ++  GL       +        +   T     PE L    + 
Sbjct: 170 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD-DSIN 228

Query: 231 PESV-------MYSFGTLLLDLLSGKHI---PPSHAL---DLI-RDRNIQTLTDS-CLEG 275
            +         +Y+ G +  ++     I      + L   DL+  D +++ +    C + 
Sbjct: 229 MKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK 288

Query: 276 Q--------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
                     S +    + ++   C       R     +   L  L +   +
Sbjct: 289 LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 340

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 60.1 bits (146), Expect = 3e-10
 Identities = 55/274 (20%), Positives = 101/274 (36%), Gaps = 34/274 (12%)

Query: 73  VYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
           V   +           +AVK+   S     R F  E + +  L +  +    G       
Sbjct: 39  VELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98

Query: 128 R--LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHD 181
           +   LV EY+P+    D L +H    +   +     L  +  I + +EY  S+ R ++ D
Sbjct: 99  QSLRLVMEYLPSGCLRDFLQRHRARLDASRL-----LLYSSQICKGMEYLGSR-RCVHRD 152

Query: 182 LNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESV 234
           L A  I+ + + + +++ FGL K     + Y               PE L     + +S 
Sbjct: 153 LAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSD 212

Query: 235 MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG----------TE 284
           ++SFG +L +L +      S + + +R    +    +        +EG           E
Sbjct: 213 VWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAE 272

Query: 285 LVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
           +  L   C    P++RP+  +L   L  L   + 
Sbjct: 273 VHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 60.0 bits (146), Expect = 3e-10
 Identities = 66/293 (22%), Positives = 105/293 (35%), Gaps = 60/293 (20%)

Query: 73  VYKGKLENQF------RIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
           V++ +            +AVK     A  D +  F  EA  + +  N  +  LLG C  G
Sbjct: 63  VFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122

Query: 126 DERLLVAEYMPNDTLAKHL----------------------FHWETQPMKWAMRLRVALH 163
               L+ EYM    L + L                            P+  A +L +A  
Sbjct: 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQ 182

Query: 164 IAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRDGRSY--STNL 216
           +A  + Y + ++    H DL A R      V   +      FGL +N      Y    N 
Sbjct: 183 VAAGMAYLSERK--FVHRDL-ATRNCL---VGENMVVKIADFGLSRNIYSADYYKADGND 236

Query: 217 AF----TPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQT 267
           A      PPE +   R T ES ++++G +L ++ S G      +     +  +RD NI  
Sbjct: 237 AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILA 296

Query: 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVS 320
             ++C           EL  L   C    P +RP+  S+   L  + +  E +
Sbjct: 297 CPENCPL---------ELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGT 340

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 59.7 bits (145), Expect = 4e-10
 Identities = 58/281 (20%), Positives = 97/281 (34%), Gaps = 61/281 (21%)

Query: 73  VYKGKL--------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCC 122
           V   +         +    +AVK     A        + E   +  + +++ + NLLG C
Sbjct: 97  VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156

Query: 123 CEGDERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEAL 168
            +     ++ EY     L ++L                   + M +   +     +A  +
Sbjct: 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 216

Query: 169 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF 218
           EY  S++    H DL A R V    V          FGL   +RD     Y   +TN   
Sbjct: 217 EYLASQK--CIHRDL-AARNVL---VTENNVMKIADFGL---ARDINNIDYYKKTTNGRL 267

Query: 219 ----TPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLT 269
                 PE L     T +S ++SFG L+ ++ + G      IP      L+++ +     
Sbjct: 268 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 327

Query: 270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
            +C           EL  +   C    P +RP  + LV  L
Sbjct: 328 ANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDL 359

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 58.4 bits (142), Expect = 6e-10
 Identities = 57/261 (21%), Positives = 97/261 (37%), Gaps = 36/261 (13%)

Query: 72  VVYKGKL----ENQFRIAVK--RFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCE 124
           VV +G+          +AVK  + +  + P+A   F+ E  A+  L +R L  L G    
Sbjct: 33  VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG-VVL 91

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
                +V E  P  +L   L              R A+ +AE + Y  SK     H DL 
Sbjct: 92  TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLA 148

Query: 184 AYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMY 236
           A  ++       ++  FGLM+       +     +         PE L+T   +  S  +
Sbjct: 149 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTW 208

Query: 237 SFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLT--DSCLEGQFSSDEGTELVRLA 289
            FG  L ++ +    P      S  L  I D+  + L   + C +         ++  + 
Sbjct: 209 MFGVTLWEMFTYGQEPWIGLNGSQILHKI-DKEGERLPRPEDCPQ---------DIYNVM 258

Query: 290 SRCLQYEPRERPNPRSLVTAL 310
            +C  ++P +RP   +L   L
Sbjct: 259 VQCWAHKPEDRPTFVALRDFL 279

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 58.1 bits (141), Expect = 8e-10
 Identities = 36/199 (18%), Positives = 71/199 (35%), Gaps = 38/199 (19%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL---GCCCEGD--- 126
           V++G  + +  +AVK F+     D + +  E   +      R  N+L             
Sbjct: 24  VWRGSWQGE-NVAVKIFS---SRDEKSWFRE-TELYNTVMLRHENILGFIASDMTSRHSS 78

Query: 127 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY------CTSKERALY 179
            +  L+  Y    +L  +L   +   +     LR+ L IA  L +       T  + A+ 
Sbjct: 79  TQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIA 135

Query: 180 H-DLNAYRIVFDDDVNPRLSCFGL----MKNSRDGRSYSTNLAFTP----PEYLRTGRVT 230
           H DL +  I+   +    ++  GL     +++      +     T     PE L    + 
Sbjct: 136 HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD-ETIQ 194

Query: 231 PESV-------MYSFGTLL 242
            +         +++FG +L
Sbjct: 195 VDCFDSYKRVDIWAFGLVL 213

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 62/282 (21%), Positives = 104/282 (36%), Gaps = 58/282 (20%)

Query: 73  VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
           V K              +AVK    +A P   +  L E   + Q+ +  +  L G C + 
Sbjct: 39  VVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98

Query: 126 DERLLVAEYMPNDTLAKHL----------------------FHWETQPMKWAMRLRVALH 163
              LL+ EY    +L   L                       H + + +     +  A  
Sbjct: 99  GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ 158

Query: 164 IAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY---STNLA 217
           I++ ++Y    +  L H DL A  I+  +    ++S FGL   SRD          +   
Sbjct: 159 ISQGMQYLAEMK--LVHRDLAARNILVAEGRKMKISDFGL---SRDVYEEDSYVKRSQGR 213

Query: 218 F----TPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTL 268
                   E L     T +S ++SFG LL ++++ G +    IPP    +L++  +    
Sbjct: 214 IPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMER 273

Query: 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
            D+C E         E+ RL  +C + EP +RP    +   L
Sbjct: 274 PDNCSE---------EMYRLMLQCWKQEPDKRPVFADISKDL 306

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 52/285 (18%), Positives = 92/285 (32%), Gaps = 58/285 (20%)

Query: 73  VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCCE 124
           V +         +   ++AVK    +A  D ++  + E + +  L     + NLLG C  
Sbjct: 62  VVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121

Query: 125 GDERLLVAEYMPN------------DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 172
           G   L++ EY                      F            L  +  +A+ + +  
Sbjct: 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA 181

Query: 173 SKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF---- 218
           SK     H D+ A R V    +          FGL   +RD    S      N       
Sbjct: 182 SKN--CIHRDVAA-RNVL---LTNGHVAKIGDFGL---ARDIMNDSNYIVKGNARLPVKW 232

Query: 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP----PSHA--LDLIRDRNIQTLTDSC 272
             PE +     T +S ++S+G LL ++ S    P      ++    L++D          
Sbjct: 233 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFA 292

Query: 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317
            +          +  +   C   EP  RP  + + + L    ++ 
Sbjct: 293 PK---------NIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 56.5 bits (137), Expect = 3e-09
 Identities = 56/290 (19%), Positives = 95/290 (32%), Gaps = 62/290 (21%)

Query: 73  VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCCE 124
           V +         +    +AVK    SA    R+  + E + +  L N   + NLLG C  
Sbjct: 39  VVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98

Query: 125 GDERLLVAEYMPNDTLAKHL----------------FHWETQPMKWAMRLRVALHIAEAL 168
           G   L++ EY     L   L                   +   +     L  +  +A+ +
Sbjct: 99  GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 158

Query: 169 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF 218
            +  SK     H DL A R +    +          FGL   +RD    S      N   
Sbjct: 159 AFLASKN--CIHRDL-AARNIL---LTHGRITKICDFGL---ARDIKNDSNYVVKGNARL 209

Query: 219 ----TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP----PSHA--LDLIRDRNIQTL 268
                 PE +     T ES ++S+G  L +L S    P    P  +    +I++      
Sbjct: 210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS 269

Query: 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
            +             E+  +   C   +P +RP  + +V  +     ++ 
Sbjct: 270 PEHAPA---------EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 56.6 bits (136), Expect = 3e-09
 Identities = 39/280 (13%), Positives = 68/280 (24%), Gaps = 49/280 (17%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNR---RLANLLGCCCE 124
           VV+  + +E     A+K F   A     +  +  E   A  +L         +       
Sbjct: 77  VVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLP 136

Query: 125 GD-----------------------ERLLVAEYMPND--TLAKHLFHWETQ--PMKWAMR 157
            D                         LL+      D   L   L               
Sbjct: 137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILAL 196

Query: 158 LRVALHIAEALEYCTSKERALYH-DL---NAYRIVFDDDVNPRLSCFGL-MKNSRDGRSY 212
             +   +        SK   L H      N   +    D    L       K    G + 
Sbjct: 197 HILTAQLIRLAANLQSKG--LVHGHFTPDN---LFIMPDGRLMLGDVSALWKVGTRGPAS 251

Query: 213 STNLAFTPPEYL--RTGRVTPESVMYSFGTLLLDLLSGK---HIPPSHALDLIRDRNIQT 267
           S  + + P E+L   T   T     +  G  +  +        +         +  +++ 
Sbjct: 252 SVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRV 311

Query: 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 307
                L     +     +  L  R L ++ R R  P   +
Sbjct: 312 PGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAM 351

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 56.2 bits (136), Expect = 3e-09
 Identities = 44/249 (17%), Positives = 87/249 (34%), Gaps = 25/249 (10%)

Query: 73  VYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCC---CEGD 126
           VYKG   E    +A            + ++F EEA  +  L++  +           +G 
Sbjct: 42  VYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK 101

Query: 127 ERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 184
           + + LV E M + TL  +L     + MK  +       I + L++  ++   + H DL  
Sbjct: 102 KCIVLVTELMTSGTLKTYL--KRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKC 159

Query: 185 YRIVFD-DDVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESVMYSFGTL 241
             I       + ++   GL    R   + +      F  PE            +Y+FG  
Sbjct: 160 DNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEK-YDESVDVYAFGMC 218

Query: 242 LLDLLSGKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
           +L++ + ++       +  +          +T       F      E+  +   C++   
Sbjct: 219 MLEMATSEYPYSECQNAAQIYRR-------VTSGVKPASFDKVAIPEVKEIIEGCIRQNK 271

Query: 298 RERPNPRSL 306
            ER + + L
Sbjct: 272 DERYSIKDL 280

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 54.6 bits (132), Expect = 1e-08
 Identities = 48/282 (17%), Positives = 93/282 (32%), Gaps = 47/282 (16%)

Query: 73  VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCE 124
           V +              +AVK     A     +  + E + +  +  +  + NLLG C +
Sbjct: 43  VIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 102

Query: 125 GDE-RLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALE 169
                +++ E+     L+ +L                     +     +  +  +A+ +E
Sbjct: 103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGME 162

Query: 170 YCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPE 222
           +  S++    H DL A  I+  +    ++  FGL ++      Y    +         PE
Sbjct: 163 FLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 220

Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQ 276
            +     T +S ++SFG LL ++ S    P             +++       D      
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP-- 278

Query: 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
                  E+ +    C   EP +RP    LV  L  L +   
Sbjct: 279 -------EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 54.0 bits (130), Expect = 3e-08
 Identities = 46/260 (17%), Positives = 85/260 (32%), Gaps = 53/260 (20%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG--------CCC 123
           +VY+G  +N+  +AVKR     +  A +   E +         L             C  
Sbjct: 40  IVYRGMFDNR-DVAVKRILPECFSFADR---EVQL--------LRESDEHPNVIRYFCTE 87

Query: 124 EGDERL-LVAEYMP----NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 178
           +  +   +  E            K   H   +P+   ++          L +  S    +
Sbjct: 88  KDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT-LLQ-----QTTSGLAHLHSLN--I 139

Query: 179 YH-DLNAYRIVF-----DDDVNPRLSCFGLMKNSRDGRSYSTNLAF---TP----PEYLR 225
            H DL  + I+         +   +S FGL K    GR   +  +    T     PE L 
Sbjct: 140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLS 199

Query: 226 ---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG-QFSSDE 281
                  T    ++S G +   ++S    P   +L    +  +   +  CL   +     
Sbjct: 200 EDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVI 259

Query: 282 GTELVRLASRCLQYEPRERP 301
             EL+    + +  +P++RP
Sbjct: 260 ARELIE---KMIAMDPQKRP 276

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 53.9 bits (129), Expect = 3e-08
 Identities = 31/198 (15%), Positives = 56/198 (28%), Gaps = 36/198 (18%)

Query: 127 ERLLVAEYMPND--TLAKHLFHWETQ--PMKWAMRLRVALHIAEALEYCTSKERALYH-D 181
            R  +   M ++  T  + L    +    +    RL++ L +   L         L H  
Sbjct: 174 SRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH--YGLVHTY 231

Query: 182 L---NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYL-----------RTG 227
           L   +   IV D      L+ F  +         S +  F PPE             R  
Sbjct: 232 LRPVD---IVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRT 288

Query: 228 RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-SDEGTELV 286
            +T     ++ G ++  +       P      I        ++       +       L+
Sbjct: 289 LMTFSFDAWALGLVIYWIWCAD--LP------ITKDAALGGSEWIFRSCKNIPQPVRALL 340

Query: 287 RLASRCLQYEPRERPNPR 304
                 L+Y   +R  P 
Sbjct: 341 E---GFLRYPKEDRLLPL 355

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 52.8 bits (126), Expect = 7e-08
 Identities = 34/210 (16%), Positives = 56/210 (26%), Gaps = 35/210 (16%)

Query: 129 LLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DL--- 182
           L         T  + L       + +    RL++ L +   L         L H  L   
Sbjct: 183 LYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH--YGLVHTYLRPV 240

Query: 183 NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYL----------RTGRVTPE 232
           +   IV D      L+ F  +              F PPE                +T  
Sbjct: 241 D---IVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFA 297

Query: 233 SVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--ELVRLAS 290
              ++ G  +  +       P+     +             E  F S +     +  L  
Sbjct: 298 FDTWTLGLAIYWIWCAD--LPNTDDAALGG----------SEWIFRSCKNIPQPVRALLE 345

Query: 291 RCLQYEPRERPNPRSLVTALVTLQKDTEVS 320
             L+Y   +R  P   +      Q  TE+S
Sbjct: 346 GFLRYPKEDRLLPLQAMETPEYEQLRTELS 375

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 60/295 (20%), Positives = 97/295 (32%), Gaps = 67/295 (22%)

Query: 73  VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCE 124
           V               ++AVK     A    R+  + E + + QL  +  + NLLG C  
Sbjct: 61  VMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120

Query: 125 GDERLLVAEYMPN---------------------DTLAKHLFHWETQPMKWAMRLRVALH 163
                L+ EY                        +   +     +   + +   L  A  
Sbjct: 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQ 180

Query: 164 IAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---S 213
           +A+ +E+   K     H DL A R V    V          FGL   +RD    S     
Sbjct: 181 VAKGMEFLEFKS--CVHRDLAA-RNVL---VTHGKVVKICDFGL---ARDIMSDSNYVVR 231

Query: 214 TNLAF----TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP------PSHALDLIRDR 263
            N         PE L  G  T +S ++S+G LL ++ S    P       ++   LI++ 
Sbjct: 232 GNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNG 291

Query: 264 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
                     E         E+  +   C  ++ R+RP+  +L + L     D E
Sbjct: 292 FKMDQPFYATE---------EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 50.1 bits (120), Expect = 5e-07
 Identities = 44/244 (18%), Positives = 87/244 (35%), Gaps = 19/244 (7%)

Query: 73  VYKGK-LENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
               K  E+  +  +K  N S        +   E   +  +++  +        E     
Sbjct: 40  AILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLY 99

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
           +V +Y     L K +   +    +    L   + I  AL++   + + L+ D+ +  I  
Sbjct: 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFL 158

Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDL 245
             D   +L  FG+ +        +     TP    PE         +S +++ G +L +L
Sbjct: 159 TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218

Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF---SSDEGTELVRLASRCLQYEPRERPN 302
            + K      A       +++ L    + G F   S     +L  L S+  +  PR+RP+
Sbjct: 219 CTLK--HAFEA------GSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPS 270

Query: 303 PRSL 306
             S+
Sbjct: 271 VNSI 274

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 49.4 bits (118), Expect = 1e-06
 Identities = 53/285 (18%), Positives = 92/285 (32%), Gaps = 82/285 (28%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANL--LGCCCEGDERL 129
           VV++G  + +  +AVKR        A     E + + +  +    N+    C    D  L
Sbjct: 31  VVFQGSFQGR-PVAVKRMLIDFCDIALM---EIKLLTESDDH--PNVIRYYCSETTDRFL 84

Query: 130 -LVAEYMPNDTL-----AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN 183
            +  E   N  L     +K++     +  K    + +   IA  + +         H L 
Sbjct: 85  YIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL--------HSLK 135

Query: 184 --------------------AYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP--- 220
                               A +    +++   +S FGL K    G+S        P   
Sbjct: 136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGT 195

Query: 221 -----PEYLR-------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
                PE L          R+T    ++S G +   +LS    P        R+ NI   
Sbjct: 196 SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD--KYSRESNI--- 250

Query: 269 TDSCLEGQFS------------SDEGTELVRLASRCLQYEPRERP 301
               + G FS              E T+L+    + + ++P +RP
Sbjct: 251 ----IRGIFSLDEMKCLHDRSLIAEATDLIS---QMIDHDPLKRP 288

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 48.8 bits (116), Expect = 1e-06
 Identities = 27/265 (10%), Positives = 62/265 (23%), Gaps = 45/265 (16%)

Query: 72  VVYKGK------LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG 125
            VY+         +N+ +  +K    +   +     +    +                  
Sbjct: 80  QVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139

Query: 126 DERLLVAEYMPNDTLAKHL-----FHWETQPMKWAMRLRVALHIAEALEYCTSKERA--- 177
           +  +LV E     TL   +        +  P    +    A+ +   +E     E     
Sbjct: 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISF--AMRMLYMIEQVHDCEIIHGD 197

Query: 178 -------LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEY--- 223
                  L +         D      L   G    S D + +     FT       +   
Sbjct: 198 IKPDNFILGNGFLEQDDEDDLSAGLALIDLGQ---SIDMKLFPKGTIFTAKCETSGFQCV 254

Query: 224 -LRTGRVTPESV-MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
            + + +     +  +     +  +L G ++        +++   +   +         D 
Sbjct: 255 EMLSNKPWNYQIDYFGVAATVYCMLFGTYMK-------VKNEGGECKPEGLFRRLPHLDM 307

Query: 282 GTELVRLASRCLQYEPRERPNPRSL 306
             E        L            L
Sbjct: 308 WNEFFH---VMLNIPDCHHLPSLDL 329

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 39/256 (15%), Positives = 73/256 (28%), Gaps = 53/256 (20%)

Query: 61  IVSEHGEKAPNVVYKGKLENQFR-IAVK--RFNRSAWPDARQ-FLEEARAVGQLRNRRLA 116
           ++  HG   P   ++       R +A+           D  Q  L     + ++    +A
Sbjct: 35  LLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVA 94

Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
            +L         L+VAE++   +L +     +T P      +R    +A A +   +   
Sbjct: 95  RVLDVVHTRAGGLVVAEWIRGGSLQEVA---DTSPSPVGA-IRAMQSLAAAADA--AHRA 148

Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKN---SRDGRSYSTNLAFTPPEYLRTGRVTPES 233
            +               +P             S DG       A  P          P+ 
Sbjct: 149 GVAL-----S-----IDHPS--------RVRVSIDGDVVLAYPATMPD-------ANPQD 183

Query: 234 VMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE--------GQFSSDEGTEL 285
            +   G  L  LL  +   P     L        L  +  +             D   ++
Sbjct: 184 DIRGIGASLYALLVNR--WP-----LPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQI 236

Query: 286 VRLASRCLQYEPRERP 301
             +A+R +Q +   R 
Sbjct: 237 SAVAARSVQGDGGIRS 252

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 46.6 bits (111), Expect = 6e-06
 Identities = 45/250 (18%), Positives = 92/250 (36%), Gaps = 20/250 (8%)

Query: 66  GEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           GE +  +V   +   +  ++AVK  +            E   +   ++  +  +      
Sbjct: 54  GEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV 113

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           G+E  ++ E++    L   +       +       V   + +AL Y  ++   ++ D+ +
Sbjct: 114 GEELWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQ-GVIHRDIKS 169

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+   D   +LS FG             +L  TP    PE +       E  ++S G 
Sbjct: 170 DSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGI 229

Query: 241 LLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
           ++++++ G+       P  A+  +RD     L +S    + S      L     R L  +
Sbjct: 230 MVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNS---HKVSP----VLRDFLERMLVRD 282

Query: 297 PRERPNPRSL 306
           P+ER   + L
Sbjct: 283 PQERATAQEL 292

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 46.0 bits (109), Expect = 8e-06
 Identities = 38/197 (19%), Positives = 68/197 (34%), Gaps = 37/197 (18%)

Query: 133 EYMPNDTLAKHLFH-WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL---NAYRIV 188
           +    + L   +      +  +  + L + + IAEA+E+  SK   ++ DL   N   I 
Sbjct: 141 QLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK-GLMHRDLKPSN---IF 196

Query: 189 FDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRV-TP---------------E 232
           F  D   ++  FGL+          T L   P     TG+V T                +
Sbjct: 197 FTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHK 256

Query: 233 SVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF---SSDEGTELVRLA 289
             ++S G +L +LL                  ++ +TD     +F    + +  +   + 
Sbjct: 257 VDIFSLGLILFELLYSF--STQMER-------VRIITDVR-NLKFPLLFTQKYPQEHMMV 306

Query: 290 SRCLQYEPRERPNPRSL 306
              L   P ERP    +
Sbjct: 307 QDMLSPSPTERPEATDI 323

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 45.7 bits (109), Expect = 9e-06
 Identities = 37/164 (22%), Positives = 57/164 (34%), Gaps = 46/164 (28%)

Query: 163 HIAEALEYCTSKERALYHDLN-AYR------IVFDDDVNPRLSCFGLMKNSRDGRSYSTN 215
            + E +           H LN  +R      I+ DDD+N +L+ FG       G      
Sbjct: 132 ALLEVICAL--------HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE- 182

Query: 216 LAFTP----PEYLRTGRV------TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI 265
           +  TP    PE +             E  M+S G ++  LL+G   PP         R  
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG--SPPFW------HRKQ 234

Query: 266 QTLTDSCLEGQFS---------SDEGTELVRLASRCLQYEPRER 300
             +    + G +          SD   +LV    R L  +P++R
Sbjct: 235 MLMLRMIMSGNYQFGSPEWDDYSDTVKDLVS---RFLVVQPQKR 275

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 51/250 (20%), Positives = 100/250 (40%), Gaps = 20/250 (8%)

Query: 66  GEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           G+ A   VY    +     +A+++ N    P     + E   + + +N  + N L     
Sbjct: 29  GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           GDE  +V EY+   +L   +       M       V     +ALE+  S  + ++ D+ +
Sbjct: 89  GDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHS-NQVIHRDIKS 144

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+   D + +L+ FG        +S  + +  TP    PE +      P+  ++S G 
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204

Query: 241 LLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
           + ++++ G+    +  P  AL LI       L +     + S+          +RCL+ +
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP---EKLSA----IFRDFLNRCLEMD 257

Query: 297 PRERPNPRSL 306
             +R + + L
Sbjct: 258 VEKRGSAKEL 267

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 23/174 (13%)

Query: 86  VKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF 145
           +KRF R           E     QL ++ + +++    E D   LV EY+   TL++++ 
Sbjct: 55  LKRFER-----------EVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE 103

Query: 146 HWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMK 204
                P+     +     I + +++  + +  + H D+    I+ D +   ++  FG+ K
Sbjct: 104 --SHGPLSVDTAINFTNQILDGIKH--AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAK 159

Query: 205 NSRDGRSYSTNLAF-TP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP 253
              +     TN    T     PE  +       + +YS G +L ++L G+  PP
Sbjct: 160 ALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE--PP 211

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 50/273 (18%), Positives = 90/273 (32%), Gaps = 60/273 (21%)

Query: 73  VYKG--KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL- 129
           V K    L++++  A+K+   +        L E   +  L ++ +        E    + 
Sbjct: 22  VVKARNALDSRYY-AIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79

Query: 130 ------------LVAEYMPNDTLAKHLFHWETQPMKW--AMRLRVALHIAEALEYCTSKE 175
                       +  EY  N TL   +    ++ +        R+   I EAL Y  S+ 
Sbjct: 80  PMTAVKKKSTLFIQMEYCENGTLYDLI---HSENLNQQRDEYWRLFRQILEALSYIHSQG 136

Query: 176 RALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF--------------TP 220
             + H DL    I  D+  N ++  FGL KN           +               T 
Sbjct: 137 --IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTA 194

Query: 221 ----PEYLR-TGRVTPESVMYSFGTLLLDLLSGKHIPPSHA------LDLIRDRNIQTLT 269
                E L  TG    +  MYS G +  +++     P S        L  +R  +I+   
Sbjct: 195 MYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY----PFSTGMERVNILKKLRSVSIE--- 247

Query: 270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
                  F  ++     ++    + ++P +RP 
Sbjct: 248 ---FPPDFDDNKMKVEKKIIRLLIDHDPNKRPG 277

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 19/146 (13%)

Query: 164 IAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST---NLAFT 219
           I  A++YC  K   + H DL A  ++ D D+N +++ FG       G           + 
Sbjct: 123 IVSAVQYCHQK--RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180

Query: 220 PPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277
            PE  + G+    PE  ++S G +L  L+SG  +P          +N++ L +  L G++
Sbjct: 181 APELFQ-GKKYDGPEVDVWSLGVILYTLVSG-SLP-------FDGQNLKELRERVLRGKY 231

Query: 278 S--SDEGTELVRLASRCLQYEPRERP 301
                  T+   L  R L   P +R 
Sbjct: 232 RIPFYMSTDCENLLKRFLVLNPIKRG 257

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 36/161 (22%), Positives = 59/161 (36%), Gaps = 42/161 (26%)

Query: 164 IAEALEYCTSKERALYHDLN-AYR------IVF---DDDVNPRLSCFGLMKNSRDGRSYS 213
           I EA+ Y         H+    +R      +++     D   +++ FGL K         
Sbjct: 157 ILEAVAYL--------HENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208

Query: 214 TNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT 269
           T +  TP    PE LR     PE  M+S G +   LL G    P +      +R  Q + 
Sbjct: 209 T-VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG--FEPFYD-----ERGDQFMF 260

Query: 270 DSCLEGQFS---------SDEGTELVRLASRCLQYEPRERP 301
              L  ++          S    +LVR   + +  +P++R 
Sbjct: 261 RRILNCEYYFISPWWDEVSLNAKDLVR---KLIVLDPKKRL 298

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 34/181 (18%), Positives = 69/181 (38%), Gaps = 16/181 (8%)

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
           +  E+    TL + +     + +   + L +   I + ++Y  SK + +  DL    I  
Sbjct: 97  IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLINRDLKPSNIFL 155

Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDL 245
            D    ++  FGL+ + ++    + +   T     PE + +     E  +Y+ G +L +L
Sbjct: 156 VDTKQVKIGDFGLVTSLKNDGKRTRSKG-TLRYMSPEQISSQDYGKEVDLYALGLILAEL 214

Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRS 305
           L         A +    +    L D  +   F      +   L  + L  +P +RPN   
Sbjct: 215 LH----VCDTAFE--TSKFFTDLRDGIISDIFDK----KEKTLLQKLLSKKPEDRPNTSE 264

Query: 306 L 306
           +
Sbjct: 265 I 265

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 56/269 (20%), Positives = 99/269 (36%), Gaps = 45/269 (16%)

Query: 72  VVYKG--KLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER 128
           VV++   K+++    A+KR        AR+  + E +A+ +L +  +        E +  
Sbjct: 20  VVFEAKNKVDDCNY-AIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTT 78

Query: 129 L------------LVAEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKE 175
                        +  +    + L   +    T +  + ++ L + L IAEA+E+  SK 
Sbjct: 79  EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG 138

Query: 176 RALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRV-TP-- 231
             L H DL    I F  D   ++  FGL+          T L   P     TG+V T   
Sbjct: 139 --LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLY 196

Query: 232 -------------ESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-RNIQTLTDSCLEGQF 277
                        +  ++S G +L +LL     P S  ++ +R   +++ L    L  Q 
Sbjct: 197 MSPEQIHGNSYSHKVDIFSLGLILFELL----YPFSTQMERVRTLTDVRNLKFPPLFTQK 252

Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSL 306
                     +    L   P ERP   ++
Sbjct: 253 YP----CEYVMVQDMLSPSPMERPEAINI 277

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 44.3 bits (105), Expect = 4e-05
 Identities = 39/164 (23%), Positives = 59/164 (35%), Gaps = 46/164 (28%)

Query: 163 HIAEALEYCTSKERALYHDLN-AYR------IVFDDDVNPRLSCFGLMKNSRDGRSYSTN 215
            + EA+ +         H  N  +R      I+ DD++  RLS FG   +   G      
Sbjct: 208 SLLEAVSFL--------HANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE- 258

Query: 216 LAFTP----PEYLRTGRV------TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI 265
           L  TP    PE L+            E  +++ G +L  LL+G   PP         R  
Sbjct: 259 LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG--SPP------FWHRRQ 310

Query: 266 QTLTDSCLEGQFS---------SDEGTELVRLASRCLQYEPRER 300
             +    +EGQ+          S    +L+    R LQ +P  R
Sbjct: 311 ILMLRMIMEGQYQFSSPEWDDRSSTVKDLIS---RLLQVDPEAR 351

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 43.4 bits (103), Expect = 5e-05
 Identities = 45/190 (23%), Positives = 71/190 (37%), Gaps = 21/190 (11%)

Query: 130 LVAEYMPNDTLAKHL--FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH----DLN 183
           +V EY     LA  +     E Q +     LRV   +  AL+ C  +    +     DL 
Sbjct: 84  IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143

Query: 184 AYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFG 239
              +  D   N +L  FGL +      S++     TP    PE +       +S ++S G
Sbjct: 144 PANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLG 203

Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF---SSDEGTELVRLASRCLQYE 296
            LL +L +    PP  A       + + L     EG+F         EL  + +R L  +
Sbjct: 204 CLLYELCALM--PPFTA------FSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLK 255

Query: 297 PRERPNPRSL 306
              RP+   +
Sbjct: 256 DYHRPSVEEI 265

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 42.7 bits (101), Expect = 8e-05
 Identities = 42/259 (16%), Positives = 78/259 (30%), Gaps = 39/259 (15%)

Query: 73  VYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDE 127
           V   + L +    A+KR       D  +   EA       +  +  L+  C        E
Sbjct: 45  VDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYH-DLNA 184
             L+  +    TL   +   + +         L + L I   LE   +K     H DL  
Sbjct: 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK--GYAHRDLKP 162

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTG----------------R 228
             I+  D+  P L   G M  +      S           +                   
Sbjct: 163 TNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCV 222

Query: 229 VTPESVMYSFGTLLLDLLSGKH-----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283
           +   + ++S G +L  ++ G+           ++ L     +          + SS    
Sbjct: 223 IDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSP----RHSSA--- 275

Query: 284 ELVRLASRCLQYEPRERPN 302
            L +L +  +  +P +RP+
Sbjct: 276 -LWQLLNSMMTVDPHQRPH 293

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 46/251 (18%), Positives = 100/251 (39%), Gaps = 27/251 (10%)

Query: 73  VYKGK-LENQFRIAVKRFNRSAWPDAR---QFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           VY+   L +   +A+K+       DA+     ++E   + QL +  +        E +E 
Sbjct: 48  VYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL 107

Query: 129 LLVAEYMPNDTLAKHL--FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
            +V E      L++ +  F  + + +      +  + +  ALE+  S+ R ++ D+    
Sbjct: 108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-RVMHRDIKPAN 166

Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLL 242
           +        +L   GL +      + + +L  TP    PE +       +S ++S G LL
Sbjct: 167 VFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL 226

Query: 243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-------SDEGTELVRLASRCLQY 295
            ++ + +   P +        N+ +L     +  +        S+E  +LV   + C+  
Sbjct: 227 YEMAALQ--SPFYG----DKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLV---NMCINP 277

Query: 296 EPRERPNPRSL 306
           +P +RP+   +
Sbjct: 278 DPEKRPDVTYV 288

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 25/161 (15%), Positives = 55/161 (34%), Gaps = 43/161 (26%)

Query: 163 HIAEALEYCTSKERALYHDLN-AYR------IVF---DDDVNPRLSCFGLMKNSRDGRSY 212
            +  AL Y         H  +  ++      I+F         ++  FGL +  +     
Sbjct: 132 QMMNALAYF--------HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS 183

Query: 213 STNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
           +     T     PE  +   VT +  ++S G ++  LL+G    P          +++ +
Sbjct: 184 TNAAG-TALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGC--LPFT------GTSLEEV 233

Query: 269 TDSCLEGQFS--------SDEGTELVRLASRCLQYEPRERP 301
                  + +        + +  +L++   + L  +P  RP
Sbjct: 234 QQKATYKEPNYAVECRPLTPQAVDLLK---QMLTKDPERRP 271

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 35/254 (13%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLR--NRRLANLLGCCCEGDE 127
            V++   E +   A+K  N           +  E   + +L+  + ++  L       D+
Sbjct: 43  KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-ITDQ 101

Query: 128 RL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
            + +V E    D L   L   ++             ++ EA+         + H DL   
Sbjct: 102 YIYMVMECGNID-LNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG--IVHSDLKPA 156

Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRS--YSTNLAFTP----PEYLR-----------TGR 228
             +  D    +L  FG+    +   +     +   T     PE ++             +
Sbjct: 157 NFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSK 215

Query: 229 VTPESVMYSFGTLLLDLLSGKHIPP-SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287
           ++P+S ++S G +L  +  GK   P    ++ I    +  + D   E +F      +L  
Sbjct: 216 ISPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--KLHAIIDPNHEIEFPDIPEKDLQD 271

Query: 288 LASRCLQYEPRERP 301
           +   CL+ +P++R 
Sbjct: 272 VLKCCLKRDPKQRI 285

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 50/246 (20%), Positives = 87/246 (35%), Gaps = 34/246 (13%)

Query: 73  VYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V++ K  +  F+ AVK+         R   EE  A   L + R+  L G   EG    + 
Sbjct: 74  VHRMKDKQTGFQCAVKKVRL---EVFRV--EELVACAGLSSPRIVPLYGAVREGPWVNIF 128

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E +   +L + +       +     L       E LEY  ++ R L+ D+ A  ++   
Sbjct: 129 MELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTR-RILHGDVKADNVLLSS 185

Query: 192 D-VNPRLSCFGL---MKNSRDGRSYSTNLAF--TP----PEYLRTGRVTPESVMYSFGTL 241
           D     L  FG    ++    G+S  T      T     PE +       +  ++S   +
Sbjct: 186 DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCM 245

Query: 242 LLDLLSGKH----IPPSHALDLIRDRN--IQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295
           +L +L+G H             I      I+ +  SC      +    + ++     L+ 
Sbjct: 246 MLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSC------APLTAQAIQ---EGLRK 296

Query: 296 EPRERP 301
           EP  R 
Sbjct: 297 EPVHRA 302

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 45/241 (18%), Positives = 80/241 (33%), Gaps = 28/241 (11%)

Query: 73  VYKG-KLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 128
           V+K    E+    AVKR         D  + L E  +  ++ ++     L     EG   
Sbjct: 73  VFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGIL 132

Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIV 188
            L  E      L +H   W    +  A           AL +  S+   ++ D+    I 
Sbjct: 133 YLQTELCGPS-LQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQ-GLVHLDVKPANIF 189

Query: 189 FDDDVNPRLSCFGLMK--------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
                  +L  FGL+           ++G        +  PE L+       + ++S G 
Sbjct: 190 LGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR-----YMAPELLQGSY-GTAADVFSLGL 243

Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
            +L++       P            Q L    L  +F++   +EL  +    L+ +P+ R
Sbjct: 244 TILEVACNME-LPHGG------EGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLR 296

Query: 301 P 301
            
Sbjct: 297 A 297

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 41.6 bits (98), Expect = 3e-04
 Identities = 34/166 (20%), Positives = 59/166 (35%), Gaps = 44/166 (26%)

Query: 159 RVALHIAEALEYCTSKERALYHDLN-AYR------IVF---DDDVNPRLSCFGLMKNSRD 208
           R+   +   + Y         H  N  +R      I+    + D + ++  FGL    + 
Sbjct: 125 RIIKQVFSGITYM--------HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176

Query: 209 GRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN 264
                     T     PE LR G    +  ++S G +L  LLSG   PP +       +N
Sbjct: 177 NTKMKD-RIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGT--PPFYG------KN 226

Query: 265 IQTLTDSCLEGQFS---------SDEGTELVRLASRCLQYEPRERP 301
              +      G+++         SD+  +L+R   + L + P  R 
Sbjct: 227 EYDILKRVETGKYAFDLPQWRTISDDAKDLIR---KMLTFHPSLRI 269

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 53/244 (21%), Positives = 89/244 (36%), Gaps = 35/244 (14%)

Query: 73  VYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN-----RRLA--NLLG--CC 122
           VY  +  +++F +A+K   ++        LE+A    QLR        L   N+L     
Sbjct: 25  VYLAREKQSKFILALKVLFKAQ-------LEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77

Query: 123 CEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH- 180
                R+ L+ EY P  T+ + L        +          +A AL YC SK   + H 
Sbjct: 78  FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSKR--VIHR 133

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESVMYSF 238
           D+    ++       +++ FG   ++   R       L + PPE +       +  ++S 
Sbjct: 134 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSL 193

Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS--SDEGTELVRLASRCLQYE 296
           G L  + L GK  PP            Q         +F+           L SR L++ 
Sbjct: 194 GVLCYEFLVGK--PP------FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 245

Query: 297 PRER 300
           P +R
Sbjct: 246 PSQR 249

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 41.0 bits (96), Expect = 5e-04
 Identities = 45/242 (18%), Positives = 78/242 (32%), Gaps = 51/242 (21%)

Query: 85  AVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN----DTL 140
           A K        D     +E + +  LR+  L NL     + +E +++ E+M      + +
Sbjct: 186 AAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV 245

Query: 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN-AYR------IVFDDDV 193
           A              MR      + + L +         H+ N  +       I+F    
Sbjct: 246 ADEHNKMSEDEAVEYMR-----QVCKGLCHM--------HENNYVHLDLKPENIMFTTKR 292

Query: 194 NPRLSC--FGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLS 247
           +  L    FGL  +    +S       T     PE      V   + M+S G L   LLS
Sbjct: 293 SNELKLIDFGLTAHLDPKQSVKVTTG-TAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS 351

Query: 248 GKHIPPSHALDLIRDRNIQTLTDSCLEGQFS---------SDEGTELVRLASRCLQYEPR 298
           G  + P          N      +     ++         S++G + +R   + L  +P 
Sbjct: 352 G--LSP------FGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR---KLLLADPN 400

Query: 299 ER 300
            R
Sbjct: 401 TR 402

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 40.7 bits (96), Expect = 5e-04
 Identities = 39/183 (21%), Positives = 66/183 (36%), Gaps = 21/183 (11%)

Query: 83  RIAVK--RFNRSAWPDARQ-FLEEARAVGQLRNRRLANL--LGCCCEGDERL-LVAEYMP 136
            +A+K      S+ P  R     EAR  G+L+   +  +   G   E D +L +    + 
Sbjct: 61  IVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFG---EIDGQLYVDMRLIN 117

Query: 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNP 195
              LA  L      P+     + +   I  AL+   +      H D+    I+   D   
Sbjct: 118 GVDLAAMLR--RQGPLAPPRAVAIVRQIGSALDA--AHAAGATHRDVKPENILVSADDFA 173

Query: 196 RLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH 250
            L  FG+   + D +          L +  PE       T  + +Y+   +L + L+G  
Sbjct: 174 YLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGS- 232

Query: 251 IPP 253
            PP
Sbjct: 233 -PP 234

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 41.0 bits (96), Expect = 5e-04
 Identities = 38/193 (19%), Positives = 64/193 (33%), Gaps = 24/193 (12%)

Query: 119 LGCCCEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE---ALEYCTSK 174
           +       ++L  + + M    L  HL               +  + AE    LE+  ++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRFYAAEIILGLEHMHNR 311

Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVT 230
              +Y DL    I+ D+  + R+S  GL  +    + ++     T     PE L+ G   
Sbjct: 312 -FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA--SVGTHGYMAPEVLQKGVAY 368

Query: 231 PESVMY-SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ--FSSDEGTELVR 287
             S  + S G +L  LL G    P         ++   +    L            EL  
Sbjct: 369 DSSADWFSLGCMLFKLLRGH--SPFRQHK---TKDKHEIDRMTLTMAVELPDSFSPELRS 423

Query: 288 LASRCLQYEPRER 300
           L    LQ +   R
Sbjct: 424 LLEGLLQRDVNRR 436

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 40.6 bits (95), Expect = 6e-04
 Identities = 41/253 (16%), Positives = 86/253 (33%), Gaps = 33/253 (13%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLR--NRRLANLLGCCCEGDE 127
            V++   E +   A+K  N           +  E   + +L+  + ++  L         
Sbjct: 71  KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 130

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
             +V E    D L   L   ++             ++ EA+         + H DL    
Sbjct: 131 IYMVMECGNID-LNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG--IVHSDLKPAN 185

Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRS--YSTNLAFTP----PEYLR-----------TGRV 229
            +  D    +L  FG+    +   +     +         PE ++             ++
Sbjct: 186 FLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKI 244

Query: 230 TPESVMYSFGTLLLDLLSGKHIPP-SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288
           +P+S ++S G +L  +  GK   P    ++ I    +  + D   E +F      +L  +
Sbjct: 245 SPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--KLHAIIDPNHEIEFPDIPEKDLQDV 300

Query: 289 ASRCLQYEPRERP 301
              CL+ +P++R 
Sbjct: 301 LKCCLKRDPKQRI 313

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 40.5 bits (95), Expect = 7e-04
 Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 35/198 (17%)

Query: 119 LGCCCEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
           L    +  +RL  V EY     L  HL   E    +   R   A  I  AL+Y  S++  
Sbjct: 213 LKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGA-EIVSALDYLHSEKNV 270

Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAF--TPPEYLRTGRVTPESV 234
           +Y DL    ++ D D + +++ FGL K   +DG +  T   F  T PEYL      PE +
Sbjct: 271 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT---FCGT-PEYL-----APEVL 321

Query: 235 MY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG--QFSSDEG 282
                         G ++ +++ G+   P        +++ + L +  L    +F    G
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMMCGR--LP------FYNQDHEKLFELILMEEIRFPRTLG 373

Query: 283 TELVRLASRCLQYEPRER 300
            E   L S  L+ +P++R
Sbjct: 374 PEAKSLLSGLLKKDPKQR 391

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 40.5 bits (95), Expect = 7e-04
 Identities = 45/200 (22%), Positives = 72/200 (36%), Gaps = 35/200 (17%)

Query: 119 LGCCCEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE---ALEYCTSK 174
           L    E  + L LV   M    L  H++H        A   R   + AE    LE    +
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA---RAVFYAAEICCGLEDLHRE 305

Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF--TPPEYLRTGRVTPE 232
            R +Y DL    I+ DD  + R+S  GL  +  +G++         T   Y+      PE
Sbjct: 306 -RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG---RVGT-VGYM-----APE 355

Query: 233 SVMY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ--FSSD 280
            V            + G LL ++++G+   P       +    + +     E    +S  
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQ--SPFQQRK--KKIKREEVERLVKEVPEEYSER 411

Query: 281 EGTELVRLASRCLQYEPRER 300
              +   L S+ L  +P ER
Sbjct: 412 FSPQARSLCSQLLCKDPAER 431

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 40.6 bits (95), Expect = 7e-04
 Identities = 42/237 (17%), Positives = 77/237 (32%), Gaps = 53/237 (22%)

Query: 85  AVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERL-----LVAEYMPND 138
            +K    S   +A+   + E + + ++ +  +  +       D        +V EY+   
Sbjct: 110 VLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQ 169

Query: 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DL---NAYRIVFDDDVN 194
           +L +       Q +  A  +   L I  AL Y       L + DL   N   ++ ++ + 
Sbjct: 170 SLKRSK----GQKLPVAEAIAYLLEILPALSY--LHSIGLVYNDLKPENI--MLTEEQL- 220

Query: 195 PRLSCFGLMKN-SRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG----- 248
            +L   G +   +  G  Y T   F  PE +R    T  + +Y+ G  L  L        
Sbjct: 221 -KLIDLGAVSRINSFGYLYGT-PGFQAPEIVR-TGPTVATDIYTVGRTLAALTLDLPTRN 277

Query: 249 ----KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
                 +P    +    D                        RL  R +  +PR+R 
Sbjct: 278 GRYVDGLPEDDPVLKTYD---------------------SYGRLLRRAIDPDPRQRF 313

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 40.1 bits (94), Expect = 8e-04
 Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 35/254 (13%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLR--NRRLANLLGCCCEGDE 127
            V++   E +   A+K  N           +  E   + +L+  + ++  L       D+
Sbjct: 24  KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-ITDQ 82

Query: 128 RL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
            + +V E    D L   L   ++             ++ EA+         + H DL   
Sbjct: 83  YIYMVMECGNID-LNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQH--GIVHSDLKPA 137

Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF--TP----PEYLR-----------TGR 228
             +  D    +L  FG+    +   +     +   T     PE ++             +
Sbjct: 138 NFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSK 196

Query: 229 VTPESVMYSFGTLLLDLLSGKHIPP-SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287
           ++P+S ++S G +L  +  GK   P    ++ I    +  + D   E +F      +L  
Sbjct: 197 ISPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--KLHAIIDPNHEIEFPDIPEKDLQD 252

Query: 288 LASRCLQYEPRERP 301
           +   CL+ +P++R 
Sbjct: 253 VLKCCLKRDPKQRI 266

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 9e-04
 Identities = 61/407 (14%), Positives = 113/407 (27%), Gaps = 127/407 (31%)

Query: 58  MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA-RQFL--EEARAVGQLRNR- 113
           M+    EH  +  +++     E+ F   V  F+     D  +  L  EE   +   ++  
Sbjct: 7   MDFETGEHQYQYKDILSV--FEDAF---VDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61

Query: 114 -RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 172
                L        E + V +++  + L  + + +   P+K   R            Y  
Sbjct: 62  SGTLRLFWTLLSKQEEM-VQKFV-EEVLRIN-YKFLMSPIKTEQRQPSM----MTRMYIE 114

Query: 173 SKERALYHD------LNAYRI---------VFDDDVNPRLSCFGLMKNSRDG-------- 209
            ++R LY+D       N  R+         + +      +   G +  S  G        
Sbjct: 115 QRDR-LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG-VLGS--GKTWVALDV 170

Query: 210 -RSYSTNLAFTPPEY-LRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHA---------- 256
             SY          + L      +PE+V+     LL  +         H+          
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230

Query: 257 -------------------LDLIRDRNI--------QTL--------TDS---------C 272
                              L  +++           + L        TD           
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS 290

Query: 273 LEGQ---FSSDEGTELVRLASRCLQYEPRERP------NPRSLVTALVTLQKDTEVSCFL 323
           L+      + DE   L+    + L   P++ P      NP     +++       ++ + 
Sbjct: 291 LDHHSMTLTPDEVKSLL---LKYLDCRPQDLPREVLTTNP--RRLSIIAESIRDGLATWD 345

Query: 324 FSSQFTYALLRLHIWSSSQIQQPA--RLCF---------VK-PPELL 358
                    L   I SS  + +PA  R  F            P  LL
Sbjct: 346 NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL 392

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	359
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	100.0
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.96
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.94
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.88
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.79
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.49
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.36
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.28
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	99.11
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.84
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.7
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.66
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.55
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.51
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.51
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.38
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.37
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	98.1
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.09
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.97
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.9
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.79
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.74
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.68
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.67
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.55
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.48
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.37
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	97.36
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	97.24
3mes_A	424	Choline kinase; malaria, structural genomics, stru	96.61
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.5
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	94.18
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	91.97
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	91.62
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	86.24

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.9e-60  Score=427.77  Aligned_cols=255  Identities=18%  Similarity=0.275  Sum_probs=207.5

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      .++++.+.++||+|+||+||+|++.+  .||||+++....  ...+.|.+|+++|++++|||||++++++.. +.++|||
T Consensus        34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm  110 (307)
T 3omv_A           34 EASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT  110 (307)
T ss_dssp             CTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             cHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence            35667788899999999999999754  499999975432  335679999999999999999999998854 5789999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---  209 (359)
                      |||++|+|.+++.. ....+++..+..|+.||+.||+|||++ +||||||||+||||++++.+||+|||+|+.....   
T Consensus       111 Ey~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~-~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~  188 (307)
T 3omv_A          111 QWCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAK-NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS  188 (307)
T ss_dssp             ECCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred             EcCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence            99999999999964 445799999999999999999999999 9999999999999999999999999999865432   


Q ss_pred             ---CCcCCCccccCcccccC---CCCCCccchhhHHHHHHHHHhCCCCCCcchhHH-HhhhhhhhhccccccCCCChHHH
Q 018244          210 ---RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       210 ---~~~~~t~~y~aPE~~~~---~~~~~~~Di~slG~il~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                         ....||+.|||||++.+   +.|+.++|||||||++|||+||+.||....... ...........+. ....+..++
T Consensus       189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~  267 (307)
T 3omv_A          189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPD-LSKLYKNCP  267 (307)
T ss_dssp             -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCC-STTSCTTSC
T ss_pred             eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCC-cccccccch
Confidence               24578999999999864   458999999999999999999999987543221 1111111111111 123345677


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      +++.+|+.+||+.||++|||+.+|++.|+.++.
T Consensus       268 ~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~  300 (307)
T 3omv_A          268 KAMKRLVADCVKKVKEERPLFPQILSSIELLQH  300 (307)
T ss_dssp             HHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            899999999999999999999999999988754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=2.9e-61  Score=432.85  Aligned_cols=254  Identities=23%  Similarity=0.316  Sum_probs=215.4

Q ss_pred             CcccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .++.+.++||+|+||+||+|++.      ++..||||+++.......++|.+|+++|++++|||||+++++|.+++..+|
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            45677888999999999999853      477899999987665566789999999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcC-----------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEec
Q 018244          131 VAEYMPNDTLAKHLFHW-----------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC  199 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~-----------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~D  199 (359)
                      |||||++|+|.+++...           ....++|..+..|+.||+.||+|||++ +|+||||||+|||+++++.+||+|
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDlKp~NILl~~~~~~Ki~D  171 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIGD  171 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECC
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCccCHhhEEECCCCcEEECC
Confidence            99999999999999642           235799999999999999999999999 999999999999999999999999


Q ss_pred             cCCcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhcccc
Q 018244          200 FGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSC  272 (359)
Q Consensus       200 Fg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~  272 (359)
                      ||+|+.....      ....||+.|||||++.+..|+.++|||||||++|||+| |+.||..............     .
T Consensus       172 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~-----~  246 (299)
T 4asz_A          172 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ-----G  246 (299)
T ss_dssp             CSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHH-----T
T ss_pred             cccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-----C
Confidence            9999865432      23457899999999999999999999999999999999 8988876544333222211     1


Q ss_pred             ccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       273 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      .....+..+++++.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus       247 ~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          247 RVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            22334566788999999999999999999999999999988654

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.5e-60  Score=433.86  Aligned_cols=254  Identities=22%  Similarity=0.306  Sum_probs=211.8

Q ss_pred             CcccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .++.+.++||+|+||+||+|++.      ++..||||+++.......+.|.+|+++|++++|||||+++++|.+.+.++|
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            45567788999999999999864      478899999987665667789999999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEE
Q 018244          131 VAEYMPNDTLAKHLFHWE-------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL  197 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl  197 (359)
                      |||||++|+|.+++....             ...++|.++..|+.||+.||+|||++ +|+||||||+||||++++.+||
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDLKp~NILl~~~~~~Ki  199 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL-HFVHRDLATRNCLVGQGLVVKI  199 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTTEEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecccccHhhEEECCCCcEEE
Confidence            999999999999997532             24689999999999999999999999 9999999999999999999999


Q ss_pred             eccCCcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhcc
Q 018244          198 SCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTD  270 (359)
Q Consensus       198 ~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~  270 (359)
                      +|||+++.....      ....||+.|||||++.+..|+.++|||||||++|||+| |+.||.............     
T Consensus       200 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~-----  274 (329)
T 4aoj_A          200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT-----  274 (329)
T ss_dssp             CCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHH-----
T ss_pred             cccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHH-----
Confidence            999999865432      23568999999999999999999999999999999999 898887654333322221     


Q ss_pred             ccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          271 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       271 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      ...+...+..+++++.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus       275 ~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          275 QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             HTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             cCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence            1123345567788999999999999999999999999999998664

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=3.8e-61  Score=438.40  Aligned_cols=247  Identities=17%  Similarity=0.196  Sum_probs=209.6

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ++|++++.||+|+||+||+|+. .+|+.||||++.....  ...+.+.+|+++|+.|+|||||++++++.+.+.+|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            5799999999999999999995 5689999999976543  235678999999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      ||+||+|.+++.......+++..++.|+.||+.||.|||++ +|+||||||+||||+.+|.+||+|||+|+.....    
T Consensus       104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~  182 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA  182 (350)
T ss_dssp             CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHH
T ss_pred             CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHHHEEECCCCCEEEcccccceeecCCcccc
Confidence            99999999999765666789999999999999999999999 9999999999999999999999999999876543    


Q ss_pred             CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ....||+.|||||++.+..|+.++|||||||++|||+||+.||................     ....+...+.++.+||
T Consensus       183 ~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~-----~~~~~~~~s~~~~~li  257 (350)
T 4b9d_A          183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS-----FPPVSLHYSYDLRSLV  257 (350)
T ss_dssp             HHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC-----CCCCCTTSCHHHHHHH
T ss_pred             cccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC-----CCCCCccCCHHHHHHH
Confidence            24569999999999999999999999999999999999999998765444333322211     1223456778999999


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 018244          290 SRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+||++||++|||+.+++++
T Consensus       258 ~~~L~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          258 SQLFKRNPRDRPSVNSILEK  277 (350)
T ss_dssp             HHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHccCChhHCcCHHHHhcC
Confidence            99999999999999999874

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.4e-60  Score=430.18  Aligned_cols=252  Identities=20%  Similarity=0.280  Sum_probs=212.8

Q ss_pred             CCcccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  128 (359)
                      +++++++++||+|+||+||+|.+.      +++.||||+++.... ...+.|.+|+.+|++++|||||+++|+|.+++.+
T Consensus        25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  104 (308)
T 4gt4_A           25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL  104 (308)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence            456778899999999999999862      467899999976533 3356799999999999999999999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN  194 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~  194 (359)
                      +||||||++|+|.++|....              ...++|..+..|+.||+.||+|||++ +||||||||+||||++++.
T Consensus       105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDLK~~NILl~~~~~  183 (308)
T 4gt4_A          105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH-HVVHKDLATRNVLVYDKLN  183 (308)
T ss_dssp             EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGC
T ss_pred             EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-CCCCCCccccceEECCCCC
Confidence            99999999999999996432              24689999999999999999999999 9999999999999999999


Q ss_pred             eEEeccCCcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhh
Q 018244          195 PRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQT  267 (359)
Q Consensus       195 ~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~  267 (359)
                      +||+|||+++.....      ....||+.|||||++.++.|+.++|||||||++|||+| |..||............   
T Consensus       184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i---  260 (308)
T 4gt4_A          184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI---  260 (308)
T ss_dssp             EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHH---
T ss_pred             EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHH---
Confidence            999999999864322      24568899999999999999999999999999999998 78888765443332222   


Q ss_pred             hccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       268 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                        ........+..++.++.+|+.+||+.||++|||+.+|++.|+.+
T Consensus       261 --~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          261 --RNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             --HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             --HcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence              11222334667788999999999999999999999999999864

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=5.8e-61  Score=436.50  Aligned_cols=246  Identities=17%  Similarity=0.224  Sum_probs=212.0

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      ..|+++++||+|+||+||+|.. .+|+.||||++........+.+.+|+++|+.++|||||+++++|.+.+.+|||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            4588999999999999999995 568999999998665555667899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CC
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~  211 (359)
                      ++|+|.+++.+   ..+++..+..|+.||+.||+|||++ +|+||||||+||||+.+|.+||+|||+|+.....    ..
T Consensus       154 ~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~  229 (346)
T 4fih_A          154 EGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS  229 (346)
T ss_dssp             TTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred             CCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccc
Confidence            99999999853   4699999999999999999999999 9999999999999999999999999999876433    35


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ..||+.|||||++.+..|+.++|||||||++|||++|+.||................ .  .........++++.+||.+
T Consensus       230 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~-~--~~~~~~~~~s~~~~dli~~  306 (346)
T 4fih_A          230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-P--PRLKNLHKVSPSLKGFLDR  306 (346)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSS-C--CCCSCGGGSCHHHHHHHHH
T ss_pred             cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC-C--CCCCccccCCHHHHHHHHH
Confidence            679999999999999999999999999999999999999997764433322222111 1  1112234577899999999


Q ss_pred             hcccCCCCCCCHHHHHHH
Q 018244          292 CLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~  309 (359)
                      ||+.||++|||+.|++++
T Consensus       307 ~L~~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          307 LLVRDPAQRATAAELLKH  324 (346)
T ss_dssp             HSCSSTTTSCCHHHHTTC
T ss_pred             HcCCChhHCcCHHHHhcC
Confidence            999999999999998864

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=6.3e-60  Score=428.45  Aligned_cols=253  Identities=17%  Similarity=0.139  Sum_probs=212.2

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ....|.+.++||+|+||+||+|+. .+|..||||+++....     ..+|+.+|+.++|||||++++++.+++.+|||||
T Consensus        56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE  130 (336)
T 4g3f_A           56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME  130 (336)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            345678888899999999999995 5689999999986432     2469999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC-CeEEeccCCcccCCCC---
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~-~~kl~DFg~a~~~~~~---  209 (359)
                      ||+||+|.+++..  .+.+++..+..|+.||+.||+|||++ +|+||||||+||||+.+| .+||+|||+|+.....   
T Consensus       131 y~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~  207 (336)
T 4g3f_A          131 LLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTR-RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG  207 (336)
T ss_dssp             CCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred             ccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence            9999999999973  45799999999999999999999999 999999999999999887 5999999999875432   


Q ss_pred             ------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          210 ------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       210 ------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                            ....||+.|||||++.+..|+.++|||||||++|||+||+.||.................   .....+..+++
T Consensus       208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~~s~  284 (336)
T 4g3f_A          208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPP---PIREIPPSCAP  284 (336)
T ss_dssp             ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCC---GGGGSCTTSCH
T ss_pred             cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCC---CchhcCccCCH
Confidence                  234699999999999999999999999999999999999999876533222222111111   11124566788


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      ++.+||.+||++||++|||+.|++++|........
T Consensus       285 ~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~  319 (336)
T 4g3f_A          285 LTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG  319 (336)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence            99999999999999999999999999888765444

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.9e-60  Score=426.97  Aligned_cols=243  Identities=17%  Similarity=0.179  Sum_probs=211.9

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      .+|++++.||+|+||+||+|.. .+++.||||++.+..   ....+.+.+|+++|+.++|||||++++++.+.+.+||||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4689999999999999999994 578999999997532   233567899999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---  209 (359)
                      |||+||+|.+++.  +.+.+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....   
T Consensus       112 Ey~~gG~L~~~i~--~~~~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~  188 (311)
T 4aw0_A          112 SYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ  188 (311)
T ss_dssp             CCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred             ecCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence            9999999999997  445799999999999999999999999 9999999999999999999999999999875432   


Q ss_pred             ---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       210 ---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                         ...+||+.|||||++.+..|+.++||||+||++|+|+||+.||...............      ...++...++++.
T Consensus       189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~  262 (311)
T 4aw0_A          189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL------EYDFPEKFFPKAR  262 (311)
T ss_dssp             CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT------CCCCCTTCCHHHH
T ss_pred             ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCcccCHHHH
Confidence               3457999999999999999999999999999999999999999876554443333221      1234566778999


Q ss_pred             HHHHHhcccCCCCCCCHHHHHH
Q 018244          287 RLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~  308 (359)
                      +||.+||++||++|||++|++.
T Consensus       263 dli~~lL~~dp~~R~t~~e~~~  284 (311)
T 4aw0_A          263 DLVEKLLVLDATKRLGCEEMEG  284 (311)
T ss_dssp             HHHHHHSCSSGGGSTTSGGGTC
T ss_pred             HHHHHHccCCHhHCcChHHHcC
Confidence            9999999999999999998754

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.2e-59  Score=438.01  Aligned_cols=246  Identities=17%  Similarity=0.228  Sum_probs=212.5

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      ..|+++++||+|+||+||+|.. .+|+.||||++........+.+.+|+.+|+.++|||||+++++|.+.+.+|||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            4588999999999999999995 568999999998766666677899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CC
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~  211 (359)
                      +||+|.+++..   ..+++..+..|+.||+.||+|||++ ||+||||||+||||+.+|.+||+|||+|+.....    ..
T Consensus       231 ~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~-~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~  306 (423)
T 4fie_A          231 EGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS  306 (423)
T ss_dssp             TTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCC
T ss_pred             CCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHC-CeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccc
Confidence            99999999853   4699999999999999999999999 9999999999999999999999999999875433    35


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      .+||+.|||||++.+..|+.++|||||||++|||++|+.||................ .+  ........++++.+||.+
T Consensus       307 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~-~~--~~~~~~~~s~~~~dli~~  383 (423)
T 4fie_A          307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-PP--RLKNLHKVSPSLKGFLDR  383 (423)
T ss_dssp             CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-CC--CCSCTTSSCHHHHHHHHH
T ss_pred             cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC-CC--CCcccccCCHHHHHHHHH
Confidence            679999999999999999999999999999999999999997664433322222111 11  112234567899999999


Q ss_pred             hcccCCCCCCCHHHHHHH
Q 018244          292 CLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~  309 (359)
                      ||..||++|||+.|++++
T Consensus       384 ~L~~dP~~R~ta~ell~H  401 (423)
T 4fie_A          384 LLVRDPAQRATAAELLKH  401 (423)
T ss_dssp             HSCSSTTTSCCHHHHTTC
T ss_pred             HcCCChhHCcCHHHHhcC
Confidence            999999999999999864

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=3.5e-59  Score=413.11  Aligned_cols=244  Identities=19%  Similarity=0.253  Sum_probs=197.7

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      ..+|++++.||+|+||+||+|.. .+|+.||||++.+...   ...+.+.+|+++|+.++|||||++++++.+.+.+|||
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv   91 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV   91 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            45789999999999999999994 5789999999976432   2345789999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--  209 (359)
                      |||+ +|+|.+++..  ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....  
T Consensus        92 mEy~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~  167 (275)
T 3hyh_A           92 IEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRH-KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF  167 (275)
T ss_dssp             EECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred             EeCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence            9999 6799999874  45799999999999999999999999 9999999999999999999999999999876543  


Q ss_pred             -CCcCCCccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          210 -RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                       ....||+.|+|||++.+..+ +.++||||+||++|+|+||+.||...............      ...++...++++.+
T Consensus       168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~  241 (275)
T 3hyh_A          168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG------VYTLPKFLSPGAAG  241 (275)
T ss_dssp             -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT------CCCCCTTSCHHHHH
T ss_pred             cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHH
Confidence             34679999999999998876 57999999999999999999999876554433322221      12345567789999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~  309 (359)
                      |+.+||+.||++|||+.|++++
T Consensus       242 li~~~L~~dP~~R~s~~eil~h  263 (275)
T 3hyh_A          242 LIKRMLIVNPLNRISIHEIMQD  263 (275)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHHC
T ss_pred             HHHHHccCChhHCcCHHHHHcC
Confidence            9999999999999999999874

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1e-58  Score=413.55  Aligned_cols=243  Identities=19%  Similarity=0.245  Sum_probs=199.0

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeee----CCcceEE
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLV  131 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv  131 (359)
                      |++.++||+|+||+||+|.. .++..||+|++.....  ...+.+.+|+++|+.++|||||+++++|.+    ...+|||
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv  107 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence            35666799999999999995 4688999999975432  235678999999999999999999999865    3458999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccCCCCCeeeCC-CCCeEEeccCCcccCCC
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~--ivH~Dikp~NIll~~-~~~~kl~DFg~a~~~~~  208 (359)
                      ||||++|+|.+++.  +...+++..+..|+.||+.||+|||++ +  |+||||||+|||+++ ++.+||+|||+|+....
T Consensus       108 mEy~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~  184 (290)
T 3fpq_A          108 TELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             EECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             EeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence            99999999999997  346799999999999999999999998 7  999999999999984 79999999999986544


Q ss_pred             C--CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchh-HHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          209 G--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       209 ~--~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                      .  ....||+.|||||++. ++|+.++|||||||++|||+||+.||..... ..+.........    ...++...++++
T Consensus       185 ~~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~  259 (290)
T 3fpq_A          185 SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK----PASFDKVAIPEV  259 (290)
T ss_dssp             TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC----CGGGGGCCCHHH
T ss_pred             CccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCC----CCCCCccCCHHH
Confidence            3  3457999999999987 4699999999999999999999999865422 212111111111    111233455789


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHH
Q 018244          286 VRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+|+.+||+.||++|||+.+++++
T Consensus       260 ~~li~~~L~~dP~~R~s~~e~l~H  283 (290)
T 3fpq_A          260 KEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHccCChhHCcCHHHHhcC
Confidence            999999999999999999999863

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=5.3e-59  Score=417.42  Aligned_cols=238  Identities=17%  Similarity=0.184  Sum_probs=199.3

Q ss_pred             CcccccccCCCCCCcEEEEEEeC----CCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      ++|++++.||+|+||+||+|+..    .++.||||++.....  .....+.+|+++|+.++|||||++++++.+++.+||
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            47899999999999999999852    467899999975432  223467889999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC--
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--  208 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~--  208 (359)
                      |||||+||+|.+++.  +...+++..+..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+....  
T Consensus       104 vmEy~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  180 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSL-GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE  180 (304)
T ss_dssp             EECCCTTCEEHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred             EEEcCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence            999999999999997  345799999999999999999999999 999999999999999999999999999986432  


Q ss_pred             --CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          209 --GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       209 --~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                        .....||+.|||||++.+..|+.++|||||||++|||+||+.||...............      ...++...++++.
T Consensus       181 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~  254 (304)
T 3ubd_A          181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA------KLGMPQFLSPEAQ  254 (304)
T ss_dssp             CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred             ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC------CCCCCCcCCHHHH
Confidence              23567999999999999999999999999999999999999999876544443332221      1234566788999


Q ss_pred             HHHHHhcccCCCCCCCH
Q 018244          287 RLASRCLQYEPRERPNP  303 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~  303 (359)
                      +|+.+||+.||++|||+
T Consensus       255 ~li~~~L~~dP~~R~ta  271 (304)
T 3ubd_A          255 SLLRMLFKRNPANRLGA  271 (304)
T ss_dssp             HHHHHHTCSSGGGSTTC
T ss_pred             HHHHHHcccCHHHCCCC
Confidence            99999999999999985

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1.3e-57  Score=417.77  Aligned_cols=256  Identities=20%  Similarity=0.258  Sum_probs=213.0

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeCC------CcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCC-cccccccceeeeC-
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRN-RRLANLLGCCCEG-  125 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~-  125 (359)
                      ..++|++.+.||+|+||+||+|.+..      ++.||||.+...... ..+.+.+|+++|.++.| ||||+++++|... 
T Consensus        62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~  141 (353)
T 4ase_A           62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG  141 (353)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence            45678899999999999999998532      357999999865433 35678999999999965 8999999998764 


Q ss_pred             CcceEEEecCCCCCHhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC
Q 018244          126 DERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD  191 (359)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~  191 (359)
                      +.++||||||++|+|.++|+...              ...+++..+..|+.||+.||+|||++ +||||||||+|||+++
T Consensus       142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~-~iiHRDLK~~NILl~~  220 (353)
T 4ase_A          142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSE  220 (353)
T ss_dssp             SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECG
T ss_pred             CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC-CeecCccCccceeeCC
Confidence            56899999999999999997432              34589999999999999999999999 9999999999999999


Q ss_pred             CCCeEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhh
Q 018244          192 DVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRN  264 (359)
Q Consensus       192 ~~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~  264 (359)
                      ++.+||+|||+|+......      ...||+.|||||++.+..|+.++|||||||++|||+| |+.||.........   
T Consensus       221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~---  297 (353)
T 4ase_A          221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---  297 (353)
T ss_dssp             GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH---
T ss_pred             CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHH---
Confidence            9999999999998764432      3357889999999999999999999999999999998 89888764322211   


Q ss_pred             hhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          265 IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                       ...+....+...+..+++++.+|+.+||+.||++|||+.+|+++|+.+.+
T Consensus       298 -~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq  347 (353)
T 4ase_A          298 -CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  347 (353)
T ss_dssp             -HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -HHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence             11122222334566678899999999999999999999999999998754

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=6.7e-57  Score=406.63  Aligned_cols=256  Identities=14%  Similarity=0.160  Sum_probs=197.3

Q ss_pred             cccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCC----cceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD----ERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e  133 (359)
                      ++.+.++||+|+||+||+|++ +|+.||||++..... .......|+..+..++|||||++++++...+    .++||||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E   81 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence            456667899999999999998 578999999975431 1222345667777899999999999998754    5799999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------CCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-------ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-------~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      |+++|+|.+++..   ..+++..+.+++.|++.||+|||++       .+|+||||||+|||++.++.+||+|||+|+..
T Consensus        82 y~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~  158 (303)
T 3hmm_A           82 YHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH  158 (303)
T ss_dssp             CCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred             CCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence            9999999999953   4699999999999999999999964       38999999999999999999999999999865


Q ss_pred             CCCC--------CcCCCccccCcccccCC------CCCCccchhhHHHHHHHHHhCCCCCCcchhHH-----------Hh
Q 018244          207 RDGR--------SYSTNLAFTPPEYLRTG------RVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-----------IR  261 (359)
Q Consensus       207 ~~~~--------~~~~t~~y~aPE~~~~~------~~~~~~Di~slG~il~elltg~~p~~~~~~~~-----------~~  261 (359)
                      ....        ...||+.|+|||++.+.      .++.++|||||||++|||+||..|+.......           ..
T Consensus       159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~  238 (303)
T 3hmm_A          159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV  238 (303)
T ss_dssp             ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred             cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence            4322        34689999999999754      36789999999999999999986653211000           00


Q ss_pred             hhhhhhhccccccCCCC-----hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          262 DRNIQTLTDSCLEGQFS-----SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       262 ~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      ............++..+     .+.+..+.+|+.+||+.||++|||+.+|++.|+++.+...
T Consensus       239 ~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~  300 (303)
T 3hmm_A          239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG  300 (303)
T ss_dssp             HHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcC
Confidence            00111111222222222     3466789999999999999999999999999999876543

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=3.6e-56  Score=400.23  Aligned_cols=242  Identities=18%  Similarity=0.251  Sum_probs=189.8

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCC--------
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGD--------  126 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--------  126 (359)
                      .+|++++.||+|+||+||+|+. .+|..||||++...... ..+.+.+|+++|+.++|||||+++++|.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            3688999999999999999995 56899999999765433 3467899999999999999999999987654        


Q ss_pred             ----cceEEEecCCCCCHhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccC
Q 018244          127 ----ERLLVAEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG  201 (359)
Q Consensus       127 ----~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg  201 (359)
                          .+|||||||++|+|.+++..... ...++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~-~IiHRDlKp~NILl~~~~~vKl~DFG  163 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDDVVKVGDFG  163 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC-cCccccCcHHHeEECCCCcEEEccCc
Confidence                36999999999999999974322 2346677899999999999999999 99999999999999999999999999


Q ss_pred             CcccCCCC----------------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhh
Q 018244          202 LMKNSRDG----------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI  265 (359)
Q Consensus       202 ~a~~~~~~----------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~  265 (359)
                      +|+.....                ....||+.|||||++.+..|+.++|||||||++|||++   ||........   ..
T Consensus       164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~---~~  237 (299)
T 4g31_A          164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVR---TL  237 (299)
T ss_dssp             CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH---HH
T ss_pred             cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHH---HH
Confidence            99875432                12469999999999999999999999999999999996   5654321111   11


Q ss_pred             hhhccccccCCCC---hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          266 QTLTDSCLEGQFS---SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       266 ~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ....    ...++   ...++.+.+|+.+||+.||++|||+.+++++
T Consensus       238 ~~~~----~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h  280 (299)
T 4g31_A          238 TDVR----NLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN  280 (299)
T ss_dssp             HHHH----TTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHh----cCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            1111    11122   2345677899999999999999999999863

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.7e-54  Score=403.68  Aligned_cols=249  Identities=15%  Similarity=0.243  Sum_probs=202.5

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeee------CCc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE------GDE  127 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~  127 (359)
                      ++|++++.||+|+||+||+|.. .+|+.||||++.....  ...+.+.+|+++|+.++|||||++++++..      .+.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            4699999999999999999995 5799999999976532  234568899999999999999999998764      357


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      +|||||||. |+|.+++.  ..+.+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+|+...
T Consensus       134 ~~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~-~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~  209 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSA-QVIHRDLKPSNLLVNENCELKIGDFGMARGLC  209 (398)
T ss_dssp             EEEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred             EEEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence            899999996 57999986  456899999999999999999999999 99999999999999999999999999998653


Q ss_pred             C--------CCCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccc------
Q 018244          208 D--------GRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC------  272 (359)
Q Consensus       208 ~--------~~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~------  272 (359)
                      .        .....||+.|+|||++.+. .++.++||||+||++|||++|+.||.+................+.      
T Consensus       210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~  289 (398)
T 4b99_A          210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA  289 (398)
T ss_dssp             ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-
T ss_pred             cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence            2        2356899999999998875 468999999999999999999999987643332222111111000      


Q ss_pred             ------------ccCCC-------ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          273 ------------LEGQF-------SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       273 ------------~~~~~-------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                  .....       ....++++.+||.+||..||++|||+.|++++
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH  345 (398)
T ss_dssp             ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                        00000       12346789999999999999999999999875

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=3.9e-53  Score=390.33  Aligned_cols=245  Identities=18%  Similarity=0.220  Sum_probs=196.3

Q ss_pred             CcccccccCCCCCCcEEEEEEeC----CCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv  131 (359)
                      +.|++++.||+|+||+||+|+.+    .++.||+|.+....  ....+.+|+++|+.+ +|||||++++++.+.+.+|||
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lv   98 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIA   98 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEE
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEE
Confidence            35889999999999999999742    46789999987643  345688999999998 699999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC-CCeEEeccCCcccCCCC-
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~-~~~kl~DFg~a~~~~~~-  209 (359)
                      |||+++|+|.+++.     .+++..+..++.||+.||+|||++ ||+||||||+|||++.+ +.+||+|||+|+..... 
T Consensus        99 mE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~-gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~  172 (361)
T 4f9c_A           99 MPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF-GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK  172 (361)
T ss_dssp             EECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCS
T ss_pred             EeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC-CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcc
Confidence            99999999999983     489999999999999999999999 99999999999999876 79999999999754322 


Q ss_pred             -------------------------------CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchh
Q 018244          210 -------------------------------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHAL  257 (359)
Q Consensus       210 -------------------------------~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~  257 (359)
                                                     ...+||+.|+|||++.+. .|+.++||||+||++|||+||+.||.....
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~  252 (361)
T 4f9c_A          173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD  252 (361)
T ss_dssp             CGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS
T ss_pred             ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCC
Confidence                                           124689999999999876 489999999999999999999999854321


Q ss_pred             HHHhhhhhhh-------------------------------hc---------ccc---------ccCCCChHHHHHHHHH
Q 018244          258 DLIRDRNIQT-------------------------------LT---------DSC---------LEGQFSSDEGTELVRL  288 (359)
Q Consensus       258 ~~~~~~~~~~-------------------------------~~---------~~~---------~~~~~~~~~~~~l~~l  288 (359)
                      +...-..+..                               ..         .+.         .........++++.+|
T Consensus       253 ~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DL  332 (361)
T 4f9c_A          253 DLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDL  332 (361)
T ss_dssp             HHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHH
T ss_pred             HHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHH
Confidence            1100000000                               00         000         0000112356789999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+||+.||++|||++|++++
T Consensus       333 l~~lL~~dP~~R~ta~eaL~H  353 (361)
T 4f9c_A          333 LDKLLDLNPASRITAEEALLH  353 (361)
T ss_dssp             HHHHTCSCTTTSCCHHHHHTS
T ss_pred             HHHHCcCChhHCcCHHHHhcC
Confidence            999999999999999999864

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=2.8e-53  Score=413.65  Aligned_cols=249  Identities=19%  Similarity=0.153  Sum_probs=213.5

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .+|++++.||+|+||+||+|.. .+|+.||+|++........+.+.+|+++|+.++|||||+++++|.+...++||||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            4688999999999999999995 578999999998766566677899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC--CCeEEeccCCcccCCCCC---
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD--VNPRLSCFGLMKNSRDGR---  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~--~~~kl~DFg~a~~~~~~~---  210 (359)
                      +||+|.+++.. ....+++..+..++.||+.||.|||++ +|+||||||+|||++.+  +.+||+|||+|+......   
T Consensus       237 ~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~  314 (573)
T 3uto_A          237 SGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK  314 (573)
T ss_dssp             CCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred             CCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence            99999999864 445799999999999999999999999 99999999999999854  899999999999876553   


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ...||+.|+|||++.+..|+.++|||||||++|+|++|..||..................  .........++++.+||.
T Consensus       315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~dli~  392 (573)
T 3uto_A          315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN--MDDSAFSGISEDGKDFIR  392 (573)
T ss_dssp             EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--CCSGGGTTSCHHHHHHHH
T ss_pred             eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCC--CCcccccCCCHHHHHHHH
Confidence            457999999999999999999999999999999999999999876544333222211110  111122346788999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~  309 (359)
                      +||+.||++|||+.|++++
T Consensus       393 ~~L~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          393 KLLLADPNTRMTIHQALEH  411 (573)
T ss_dssp             TTSCSSGGGSCCHHHHHHS
T ss_pred             HHccCChhHCcCHHHHhcC
Confidence            9999999999999999875

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=7.3e-53  Score=409.52  Aligned_cols=248  Identities=17%  Similarity=0.131  Sum_probs=204.8

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHH---HHHHHHHhcCCCcccccccceeeeCCcc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQF---LEEARAVGQLRNRRLANLLGCCCEGDER  128 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~---~~e~~~l~~l~h~niv~~~~~~~~~~~~  128 (359)
                      .++|++++.||+|+||+||+|+. .+|+.||||++.+...   .....+   .+++.+++.++|||||+++++|.+.+.+
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            46799999999999999999995 5699999999974321   112223   3456778888999999999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      ||||||++||+|.+++.  ..+.+++..+..|+.||+.||.|||++ |||||||||+||||+.+|.+||+|||+|+....
T Consensus       268 ylVmEy~~GGdL~~~l~--~~~~l~E~~a~~y~~qIl~aL~yLH~~-gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~  344 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSK  344 (689)
T ss_dssp             EEEECCCCSCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             EEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence            99999999999999997  346799999999999999999999999 999999999999999999999999999987654


Q ss_pred             C--CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          209 G--RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       209 ~--~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                      .  ...+||+.|||||++.. ..|+.++|||||||++|||++|..||.......... .......  ....++...++++
T Consensus       345 ~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~-i~~~i~~--~~~~~p~~~S~~a  421 (689)
T 3v5w_A          345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLT--MAVELPDSFSPEL  421 (689)
T ss_dssp             CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHH-HHHHHHH--CCCCCCTTSCHHH
T ss_pred             CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHhhcC--CCCCCCccCCHHH
Confidence            3  45689999999999975 579999999999999999999999997643221111 1111111  1223556778899


Q ss_pred             HHHHHHhcccCCCCCCC-----HHHHHHH
Q 018244          286 VRLASRCLQYEPRERPN-----PRSLVTA  309 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps-----~~~il~~  309 (359)
                      .+||.+||+.||++|++     +++|+++
T Consensus       422 ~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H  450 (689)
T 3v5w_A          422 RSLLEGLLQRDVNRRLGCLGRGAQEVKES  450 (689)
T ss_dssp             HHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred             HHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence            99999999999999998     6777754

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=2.5e-49  Score=360.92  Aligned_cols=259  Identities=24%  Similarity=0.423  Sum_probs=219.0

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      ..|++.+.||+|+||+||+|...++..||||++........+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus        39 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  118 (321)
T 2qkw_B           39 NNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYME  118 (321)
T ss_dssp             CCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCT
T ss_pred             hccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCC
Confidence            45667778899999999999988899999999987766667889999999999999999999999999999999999999


Q ss_pred             CCCHhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-----
Q 018244          137 NDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----  209 (359)
Q Consensus       137 ~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-----  209 (359)
                      +|+|.+++....  ...+++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+|||++......     
T Consensus       119 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  197 (321)
T 2qkw_B          119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR-AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL  197 (321)
T ss_dssp             TCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCC
T ss_pred             CCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC-CeecCCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence            999999996432  23589999999999999999999999 9999999999999999999999999999764322     


Q ss_pred             -CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHH-----------HhhhhhhhhccccccCCC
Q 018244          210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-----------IRDRNIQTLTDSCLEGQF  277 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~-----------~~~~~~~~~~~~~~~~~~  277 (359)
                       ....||+.|+|||++.+..++.++||||||+++|+|++|+.||.......           ..........++......
T Consensus       198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (321)
T 2qkw_B          198 STVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKI  277 (321)
T ss_dssp             BCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCS
T ss_pred             ccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcccc
Confidence             22347899999999998899999999999999999999999886432111           111112223333334455


Q ss_pred             ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      +...+..+.+++.+||+.||++|||+.++++.|+.+.+.
T Consensus       278 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~  316 (321)
T 2qkw_B          278 RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL  316 (321)
T ss_dssp             CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence            677889999999999999999999999999999987653

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=9.4e-50  Score=361.93  Aligned_cols=256  Identities=19%  Similarity=0.259  Sum_probs=215.0

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .+|.+.+.||+|+||+||+|.. .++..||+|.+........+.+.+|+++++.++||||+++++++.+....++||||+
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   89 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI   89 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence            5678888999999999999995 468899999997766566778999999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----  210 (359)
                      ++|+|.+++.. ....+++..+..++.|++.||+|||++ +++|+||||+||+++.++.+||+|||++.......     
T Consensus        90 ~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  167 (310)
T 3s95_A           90 KGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSM-NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG  167 (310)
T ss_dssp             TTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred             CCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence            99999999975 356799999999999999999999999 99999999999999999999999999997654321     


Q ss_pred             -------------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhh-hhhhhhccccccCC
Q 018244          211 -------------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-RNIQTLTDSCLEGQ  276 (359)
Q Consensus       211 -------------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~  276 (359)
                                   ...||+.|+|||++.+..++.++||||||+++|+|++|..|+.......... .......    ...
T Consensus       168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~----~~~  243 (310)
T 3s95_A          168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL----DRY  243 (310)
T ss_dssp             ------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH----HHT
T ss_pred             cccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc----ccc
Confidence                         3468999999999999999999999999999999999998876432211110 0011111    112


Q ss_pred             CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       277 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      .+..+++.+.+++.+||+.||++|||+.++++.|+.+.....
T Consensus       244 ~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~  285 (310)
T 3s95_A          244 CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA  285 (310)
T ss_dssp             CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence            234455679999999999999999999999999999876543

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=3.1e-49  Score=358.43  Aligned_cols=259  Identities=19%  Similarity=0.289  Sum_probs=208.4

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      .+.+|++.+.||+|+||+||+|.. ++..||||++......  ..+.+.+|+++++.++||||+++++++......++||
T Consensus        35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 3p86_A           35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT  113 (309)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred             ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence            456889999999999999999987 5778999999765432  3457889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          133 EYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~--ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      ||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +  ++||||||+||+++.++.+||+|||+++.....
T Consensus       114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~  192 (309)
T 3p86_A          114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST  192 (309)
T ss_dssp             ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS-SSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred             ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence            9999999999996422 12389999999999999999999999 8  999999999999999999999999999764433


Q ss_pred             ----CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       210 ----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                          ....||+.|+|||++.+..++.++||||||+++|+|++|+.||.............    ........+...+.++
T Consensus       193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l  268 (309)
T 3p86_A          193 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG----FKCKRLEIPRNLNPQV  268 (309)
T ss_dssp             ---------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH----HSCCCCCCCTTSCHHH
T ss_pred             ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH----hcCCCCCCCccCCHHH
Confidence                34568999999999999999999999999999999999999987654332222111    1112233455677889


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccC
Q 018244          286 VRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV  319 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~  319 (359)
                      .+|+.+||+.||++|||+.++++.|+.+.+....
T Consensus       269 ~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p  302 (309)
T 3p86_A          269 AAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP  302 (309)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999998765443

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=7.1e-50  Score=360.68  Aligned_cols=248  Identities=17%  Similarity=0.239  Sum_probs=210.8

Q ss_pred             CCCcccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ....|.+++.||+|+||+||+|. ..++..||||++........+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            34568899999999999999998 46788999999987665567788999999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |+.+|+|.+++..   ..+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++......    
T Consensus        98 ~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  173 (297)
T 3fxz_A           98 YLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR  173 (297)
T ss_dssp             CCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred             CCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccccc
Confidence            9999999999953   4689999999999999999999999 9999999999999999999999999998765433    


Q ss_pred             CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ....||+.|+|||++.+..++.++||||||+++|+|++|..||..............   ........+...+..+.+|+
T Consensus       174 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li  250 (297)
T 3fxz_A          174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT---NGTPELQNPEKLSAIFRDFL  250 (297)
T ss_dssp             CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---HCSCCCSCGGGSCHHHHHHH
T ss_pred             CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---CCCCCCCCccccCHHHHHHH
Confidence            245689999999999999999999999999999999999999876533222111111   11111223455678899999


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 018244          290 SRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+||+.||++|||+.+++++
T Consensus       251 ~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          251 NRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             HHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHccCChhHCcCHHHHhhC
Confidence            99999999999999999874

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=6.9e-50  Score=365.45  Aligned_cols=246  Identities=20%  Similarity=0.298  Sum_probs=211.6

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      ....|.+++.||+|+||.||+|.. .+|+.||||++.....  ...+.+.+|+++|+.++||||+++++++...+..++|
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   92 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI   92 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence            456789999999999999999995 6789999999976432  3356788999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--  209 (359)
                      |||+++|+|.+++..  ...+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++......  
T Consensus        93 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  169 (328)
T 3fe3_A           93 MEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK  169 (328)
T ss_dssp             ECCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG
T ss_pred             EECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc
Confidence            999999999999963  45699999999999999999999999 9999999999999999999999999999865543  


Q ss_pred             -CCcCCCccccCcccccCCCCC-CccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          210 -RSYSTNLAFTPPEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~~~~~-~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                       ....||+.|+|||++.+..++ .++||||||+++|+|++|+.||...............      ....+...+.++.+
T Consensus       170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~  243 (328)
T 3fe3_A          170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG------KYRIPFYMSTDCEN  243 (328)
T ss_dssp             GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred             cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHH
Confidence             345789999999999988765 7899999999999999999999876554443332221      11234556788999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~  309 (359)
                      |+.+||..||.+|||+.+++++
T Consensus       244 li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          244 LLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             HHHHHCCSSTTTSCCHHHHTTC
T ss_pred             HHHHHCCCChhHCcCHHHHhcC
Confidence            9999999999999999999875

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=5.8e-49  Score=349.52  Aligned_cols=253  Identities=21%  Similarity=0.309  Sum_probs=215.8

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      ..+|.+++.||+|+||+||+|...++..||+|++..... ..+.+.+|+++++.++||||+++++++.+....++||||+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   87 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence            357889999999999999999988888999999986543 3567899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-----C
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-----~  210 (359)
                      ++++|.+++.. ....+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++......     .
T Consensus        88 ~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  165 (269)
T 4hcu_A           88 EHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  165 (269)
T ss_dssp             TTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred             CCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhC-CeecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence            99999999964 445689999999999999999999999 9999999999999999999999999999865432     2


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ...+|..|+|||.+.+..++.++||||||+++|+|++ |..||...............     .....+...+.++.+++
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li  240 (269)
T 4hcu_A          166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-----FRLYKPRLASTHVYQIM  240 (269)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHH
T ss_pred             CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC-----ccCCCCCcCCHHHHHHH
Confidence            3445778999999998899999999999999999999 88887765443332222211     12223445577899999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          290 SRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      .+||+.||++|||+.++++.|+.+.+.
T Consensus       241 ~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          241 NHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHccCCcccCcCHHHHHHHHHHHHHc
Confidence            999999999999999999999998653

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=3.9e-49  Score=360.35  Aligned_cols=255  Identities=20%  Similarity=0.282  Sum_probs=213.0

Q ss_pred             CcccccccCCCCCCcEEEEEEeC----CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      ..|.+.+.||+|+||+||+|...    .+..||||.+..... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  128 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV  128 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence            56888999999999999999963    345699999986533 3356789999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-  210 (359)
                      |||+++|+|.+++.. ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...... 
T Consensus       129 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  206 (325)
T 3kul_A          129 TEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDL-GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD  206 (325)
T ss_dssp             EECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred             eeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence            999999999999964 445799999999999999999999999 99999999999999999999999999998765432 


Q ss_pred             ------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       211 ------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                            ...+|+.|+|||++.+..++.++||||||+++|+|++ |..||..............     ......+...+.
T Consensus       207 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~  281 (325)
T 3kul_A          207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE-----GYRLPAPMGCPH  281 (325)
T ss_dssp             CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT-----TCCCCCCTTCCH
T ss_pred             ceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc-----CCCCCCCCCcCH
Confidence                  2234678999999998889999999999999999999 8988866544333222211     122233456678


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      ++.+|+.+||+.||++|||+.++++.|+.+.+...
T Consensus       282 ~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~  316 (325)
T 3kul_A          282 ALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE  316 (325)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence            89999999999999999999999999999876544

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.9e-48  Score=355.19  Aligned_cols=261  Identities=16%  Similarity=0.201  Sum_probs=217.3

Q ss_pred             cccCHHHHHHHhcCCCc-------ccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCc
Q 018244           42 CEYSIETLRTATSGFAM-------ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNR  113 (359)
Q Consensus        42 ~~~~~~~~~~~~~~~~~-------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~  113 (359)
                      ..++.+++..+++....       +...+.||+|+||.||+|... +|..||||++........+.+.+|+.+++.++||
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            34778888888765432       455667899999999999965 7899999999876666677899999999999999


Q ss_pred             ccccccceeeeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC
Q 018244          114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV  193 (359)
Q Consensus       114 niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~  193 (359)
                      ||+++++++...+..++||||+++++|.+++.   ...+++..+..++.|++.||.|||+. +++||||||+||+++.++
T Consensus       103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~  178 (321)
T 2c30_A          103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQ-GVIHRDIKSDSILLTLDG  178 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTC
T ss_pred             CcceEEEEEEECCEEEEEEecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCC
Confidence            99999999999999999999999999999984   45799999999999999999999999 999999999999999999


Q ss_pred             CeEEeccCCcccCCCC----CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhc
Q 018244          194 NPRLSCFGLMKNSRDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT  269 (359)
Q Consensus       194 ~~kl~DFg~a~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~  269 (359)
                      .+||+|||++......    ....||+.|+|||++.+..++.++||||||+++|+|++|+.||............... .
T Consensus       179 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~-~  257 (321)
T 2c30_A          179 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS-P  257 (321)
T ss_dssp             CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS-S
T ss_pred             cEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-C
Confidence            9999999998765432    3457899999999999889999999999999999999999998765333222111111 1


Q ss_pred             cccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       270 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+  ........+..+.+++.+||+.||++|||+.+++++
T Consensus       258 ~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          258 PP--KLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             CC--CCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CC--CcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            11  111223456789999999999999999999999875

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=1e-48  Score=363.77  Aligned_cols=254  Identities=19%  Similarity=0.303  Sum_probs=212.8

Q ss_pred             CCcccccccCCCCCCcEEEEEEe--------CCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcC-CCcccccccceeeeC
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL--------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG  125 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~  125 (359)
                      ...|.+.+.||+|+||.||+|..        .++..||||++...... ..+.+.+|+++|+.+ +||||+++++++...
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            35688889999999999999984        23567999999865432 356789999999999 899999999999999


Q ss_pred             CcceEEEecCCCCCHhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC
Q 018244          126 DERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD  191 (359)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~  191 (359)
                      +..++||||+++|+|.+++....              ...+++..+..++.||+.||.|||++ +|+||||||+|||++.
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~  238 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTE  238 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECT
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CeeccccchhhEEECC
Confidence            99999999999999999997532              23589999999999999999999999 9999999999999999


Q ss_pred             CCCeEEeccCCcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhh
Q 018244          192 DVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRN  264 (359)
Q Consensus       192 ~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~  264 (359)
                      ++.+||+|||+++.....      ....+|+.|+|||++.+..++.++||||||+++|||++ |..||............
T Consensus       239 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~  318 (370)
T 2psq_A          239 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL  318 (370)
T ss_dssp             TCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH
T ss_pred             CCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            999999999999865432      22345778999999999999999999999999999999 88888765433322211


Q ss_pred             hhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          265 IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                           ........+..++.++.+++.+||+.||++|||+.++++.|+.+..
T Consensus       319 -----~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          319 -----KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             -----HTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -----hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence                 1112223455677889999999999999999999999999998865

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=5.6e-49  Score=360.53  Aligned_cols=245  Identities=17%  Similarity=0.223  Sum_probs=209.8

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      ..+|++++.||+|+||+||+|.. .+++.||+|++....   ......+.+|+.+|+.++||||+++++++...+..++|
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            45788999999999999999995 468999999997531   23356788999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC---
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---  208 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~---  208 (359)
                      |||+++|+|.+++.  ....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++....   
T Consensus        84 ~E~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~  160 (337)
T 1o6l_A           84 MEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA  160 (337)
T ss_dssp             EECCTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred             EeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence            99999999999986  345789999999999999999999999 999999999999999999999999999986432   


Q ss_pred             -CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          209 -GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       209 -~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                       .....||+.|+|||++.+..++.++||||||+++|||++|..||...............      ...++...+.++.+
T Consensus       161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~  234 (337)
T 1o6l_A          161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKS  234 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred             cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHH
Confidence             23456899999999999999999999999999999999999998766544333222211      12345567789999


Q ss_pred             HHHHhcccCCCCCC-----CHHHHHHH
Q 018244          288 LASRCLQYEPRERP-----NPRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rp-----s~~~il~~  309 (359)
                      |+.+||+.||++||     ++.+++++
T Consensus       235 li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          235 LLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             HHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             HHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence            99999999999999     89999875

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=5.7e-49  Score=359.20  Aligned_cols=271  Identities=28%  Similarity=0.472  Sum_probs=222.3

Q ss_pred             cccccCHHHHHHHhcCCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccc
Q 018244           40 VFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANL  118 (359)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~  118 (359)
                      ....++..++....++|.   +.+.||+|+||.||+|...++..||||++...... ....+.+|+++++.++||||+++
T Consensus        16 ~~~~~~~~~~~~~~~~y~---~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   92 (326)
T 3uim_A           16 QLKRFSLRELQVASDNFS---NKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL   92 (326)
T ss_dssp             CCEECCTHHHHTTTTSSC---STTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred             ccceecHHHHHHHhhccc---cceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccce
Confidence            356788888887776655   55666999999999999878899999999865422 23368899999999999999999


Q ss_pred             cceeeeCCcceEEEecCCCCCHhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHhhcCC--CcccccCCCCCeeeCCCCC
Q 018244          119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKE--RALYHDLNAYRIVFDDDVN  194 (359)
Q Consensus       119 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~--~ivH~Dikp~NIll~~~~~  194 (359)
                      ++++......++||||+.+|+|.+++....  ...+++..+..++.|++.||.|||+..  +++|+||||+|||++.++.
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~  172 (326)
T 3uim_A           93 RGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE  172 (326)
T ss_dssp             CEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCC
T ss_pred             EEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCC
Confidence            999999999999999999999999997542  335999999999999999999999863  8999999999999999999


Q ss_pred             eEEeccCCcccCCCC-----CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHH----------
Q 018244          195 PRLSCFGLMKNSRDG-----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL----------  259 (359)
Q Consensus       195 ~kl~DFg~a~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~----------  259 (359)
                      +||+|||++......     ....||+.|+|||++.+..++.++||||||+++|+|++|..||.......          
T Consensus       173 ~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  252 (326)
T 3uim_A          173 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV  252 (326)
T ss_dssp             EEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHH
T ss_pred             EEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHH
Confidence            999999999865432     23458999999999988889999999999999999999999885321110          


Q ss_pred             ---HhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          260 ---IRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       260 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                         ..........+.......+...+..+.+++.+||+.||++|||+.+++++|+..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             TTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             HHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence               011122223333344455677889999999999999999999999999999864

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=7.8e-49  Score=362.78  Aligned_cols=248  Identities=18%  Similarity=0.195  Sum_probs=207.8

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc------hHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      ..|.+.+.||+|+||+||+|.. .+|..||+|.+......      ..+.+.+|+.+|+.++||||+++++++.+....+
T Consensus        12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~   91 (361)
T 2yab_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV   91 (361)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence            3588899999999999999995 46889999999765322      2467899999999999999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC----CeEEeccCCccc
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKN  205 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~----~~kl~DFg~a~~  205 (359)
                      +||||+++|+|.+++.  ....+++..+..++.||+.||.|||++ ||+||||||+|||++.++    .+||+|||++..
T Consensus        92 lv~e~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~  168 (361)
T 2yab_A           92 LILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (361)
T ss_dssp             EEEECCCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred             EEEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence            9999999999999996  456799999999999999999999999 999999999999998776    799999999987


Q ss_pred             CCCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHH
Q 018244          206 SRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       206 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                      ....   ....||+.|+|||++.+..++.++||||||+++|+|++|..||..................  .........+
T Consensus       169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s  246 (361)
T 2yab_A          169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD--FDEEFFSQTS  246 (361)
T ss_dssp             CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--CCHHHHTTSC
T ss_pred             cCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC--CCchhccCCC
Confidence            6543   3456899999999999889999999999999999999999999776443332222111100  0000112356


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .++.+||.+||..||++|||+.+++++
T Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~l~h  273 (361)
T 2yab_A          247 ELAKDFIRKLLVKETRKRLTIQEALRH  273 (361)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            789999999999999999999999864

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=6.3e-49  Score=353.92  Aligned_cols=258  Identities=19%  Similarity=0.296  Sum_probs=211.2

Q ss_pred             CcccccccCCCCCCcEEEEEEe-----CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeC--Ccce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~  129 (359)
                      ..|++++.||+|+||+||+|..     .++..||||++........+.+.+|+++++.++||||+++++++...  ...+
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK   89 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence            5688999999999999999984     35889999999877656667899999999999999999999998553  5689


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +||||+++|+|.+++.. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++......
T Consensus        90 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  167 (295)
T 3ugc_A           90 LIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD  167 (295)
T ss_dssp             EEEECCTTCBHHHHHHH-CGGGCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred             EEEEeCCCCCHHHHHHh-cccccCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence            99999999999999975 344699999999999999999999999 9999999999999999999999999999875433


Q ss_pred             C-------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhh-----------hhhhhhccc
Q 018244          210 R-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-----------RNIQTLTDS  271 (359)
Q Consensus       210 ~-------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~-----------~~~~~~~~~  271 (359)
                      .       ...++..|+|||.+.+..++.++||||||+++|+|+||..|+..........           .........
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (295)
T 3ugc_A          168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN  247 (295)
T ss_dssp             --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred             cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhc
Confidence            2       2345677999999998999999999999999999999998876543322110           011111122


Q ss_pred             cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       272 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      ......+..++.++.+|+.+||+.||++|||+.++++.|+.+.+.
T Consensus       248 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~  292 (295)
T 3ugc_A          248 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN  292 (295)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            222334556778999999999999999999999999999998764

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=2.6e-48  Score=347.73  Aligned_cols=253  Identities=23%  Similarity=0.350  Sum_probs=212.4

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      ..+|.+++.||+|+||+||+|...++..||+|++..... ..+.+.+|++++..++||||+++++++.+....++||||+
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  101 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM  101 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence            457889999999999999999988888999999986543 3567899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-----C
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-----~  210 (359)
                      ++++|.+++.. ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++......     .
T Consensus       102 ~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  179 (283)
T 3gen_A          102 ANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV  179 (283)
T ss_dssp             TTCBHHHHHHC-GGGCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTT
T ss_pred             CCCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCccceEEEcCCCCEEEcccccccccccccccccc
Confidence            99999999964 245699999999999999999999999 9999999999999999999999999999865432     2


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ...+|+.|+|||.+.+..++.++||||||+++|+|+| |+.||...............     .....+...++.+.+++
T Consensus       180 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li  254 (283)
T 3gen_A          180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-----LRLYRPHLASEKVYTIM  254 (283)
T ss_dssp             STTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHH
T ss_pred             CCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc-----cCCCCCCcCCHHHHHHH
Confidence            3345778999999998889999999999999999998 88888765433332222211     12223344567899999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          290 SRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      .+||+.||++|||+.++++.|+.+.++
T Consensus       255 ~~~l~~~p~~Rps~~~ll~~L~~~~~~  281 (283)
T 3gen_A          255 YSCWHEKADERPTFKILLSNILDVMDE  281 (283)
T ss_dssp             HHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHccCChhHCcCHHHHHHHHHHHhhc
Confidence            999999999999999999999988654

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1e-48  Score=347.67  Aligned_cols=252  Identities=20%  Similarity=0.321  Sum_probs=213.2

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      ..|.+++.||+|+||.||+|...++..||+|++..... ..+.+.+|++++..++||||+++++++......++||||++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (268)
T 3sxs_A            8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS   86 (268)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence            56889999999999999999988888899999986553 35678999999999999999999999999999999999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----C
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S  211 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----~  211 (359)
                      +++|.+++.. ....+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......     .
T Consensus        87 ~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~  164 (268)
T 3sxs_A           87 NGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAFLESH-QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG  164 (268)
T ss_dssp             TCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHT-TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred             CCcHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence            9999999964 344699999999999999999999999 99999999999999999999999999998665432     2


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ..+|+.|+|||.+.+..++.++||||||+++|+|++ |..||...............     .....+...++.+.+++.
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~  239 (268)
T 3sxs_A          165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG-----HRLYRPHLASDTIYQIMY  239 (268)
T ss_dssp             CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHHH
T ss_pred             CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcC-----CCCCCCCcChHHHHHHHH
Confidence            345677999999998889999999999999999999 88887655433322221111     112223445678999999


Q ss_pred             HhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          291 RCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      +||+.||++|||+.++++.|+.+.+.
T Consensus       240 ~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          240 SCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             HTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             HHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            99999999999999999999998654

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=2e-48  Score=350.75  Aligned_cols=260  Identities=17%  Similarity=0.242  Sum_probs=211.9

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ..|++++.||+|+||.||+|.. .++..||+|.+.....   ...+.+.+|+.+++.++||||+++++++...+..++||
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   90 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM   90 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence            4688999999999999999994 4688999999865432   22457889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---  209 (359)
                      ||+++++|.+++..  ...+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++......   
T Consensus        91 e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  167 (294)
T 4eqm_A           91 EYIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDM-RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT  167 (294)
T ss_dssp             ECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred             eCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc
Confidence            99999999999973  35799999999999999999999999 9999999999999999999999999999865433   


Q ss_pred             --CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       210 --~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                        ....||+.|+|||.+.+..++.++||||||+++|+|++|+.||................... .........+..+.+
T Consensus       168 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~  246 (294)
T 4eqm_A          168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPN-VTTDVRKDIPQSLSN  246 (294)
T ss_dssp             -------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCC-HHHHSCTTSCHHHHH
T ss_pred             ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCC-cchhcccCCCHHHHH
Confidence              23468999999999999999999999999999999999999997664433222222111111 111123445678999


Q ss_pred             HHHHhcccCCCCCC-CHHHHHHHHHHhhhcccCC
Q 018244          288 LASRCLQYEPRERP-NPRSLVTALVTLQKDTEVS  320 (359)
Q Consensus       288 li~~cl~~dp~~Rp-s~~~il~~L~~~~~~~~~~  320 (359)
                      ++.+||+.||++|| +++++.+.|+.+.......
T Consensus       247 li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~  280 (294)
T 4eqm_A          247 VILRATEKDKANRYKTIQEMKDDLSSVLHENRAN  280 (294)
T ss_dssp             HHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTT
T ss_pred             HHHHHhcCCHhHccccHHHHHHHHHHHHhhccCC
Confidence            99999999999998 8999999999876654443

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=2.5e-48  Score=353.64  Aligned_cols=245  Identities=18%  Similarity=0.212  Sum_probs=210.3

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      ..+|++++.||+|+||.||+|.. .+|+.||+|++....   ....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            46789999999999999999995 468999999997532   12356688999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-C
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-R  210 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-~  210 (359)
                      |||+++|+|.+++..  ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..... .
T Consensus        85 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~  161 (318)
T 1fot_A           85 MDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY  161 (318)
T ss_dssp             ECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred             EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence            999999999999973  45699999999999999999999999 9999999999999999999999999999876543 3


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ...||+.|+|||++.+..++.++||||||+++|+|++|..||..............    .  ...++...+.++.+++.
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~----~--~~~~p~~~~~~~~~li~  235 (318)
T 1fot_A          162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN----A--ELRFPPFFNEDVKDLLS  235 (318)
T ss_dssp             CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH----C--CCCCCTTSCHHHHHHHH
T ss_pred             cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh----C--CCCCCCCCCHHHHHHHH
Confidence            56789999999999999999999999999999999999999876544333222221    1  12344566788999999


Q ss_pred             HhcccCCCCCC-----CHHHHHHH
Q 018244          291 RCLQYEPRERP-----NPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rp-----s~~~il~~  309 (359)
                      +||..||++||     ++++++++
T Consensus       236 ~lL~~dp~~R~~~~~~~~~~i~~h  259 (318)
T 1fot_A          236 RLITRDLSQRLGNLQNGTEDVKNH  259 (318)
T ss_dssp             HHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             HHhccCHHHcCCCcCCCHHHHhcC
Confidence            99999999999     88988864

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.3e-48  Score=362.79  Aligned_cols=258  Identities=21%  Similarity=0.313  Sum_probs=213.3

Q ss_pred             CcccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      ..|.+++.||+|+||+||+|.+.      ++..||||++..... .....+.+|+.+++.++||||+++++++......+
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  150 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  150 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence            56788999999999999999843      466899999975433 33456889999999999999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC---CeEEeccC
Q 018244          130 LVAEYMPNDTLAKHLFHWE-----TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFG  201 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~---~~kl~DFg  201 (359)
                      +||||+++|+|.+++....     ...+++..++.++.||+.||.|||++ +|+||||||+|||++.++   .+||+|||
T Consensus       151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~~~~kL~DFG  229 (367)
T 3l9p_A          151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDFG  229 (367)
T ss_dssp             EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred             EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChhhEEEecCCCCceEEECCCc
Confidence            9999999999999997532     24689999999999999999999999 999999999999999555   59999999


Q ss_pred             CcccC------CCCCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhcccccc
Q 018244          202 LMKNS------RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE  274 (359)
Q Consensus       202 ~a~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~  274 (359)
                      +++..      .......+|+.|+|||++.+..++.++||||||+++|||++ |..||..............     ...
T Consensus       230 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~-----~~~  304 (367)
T 3l9p_A          230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS-----GGR  304 (367)
T ss_dssp             HHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT-----TCC
T ss_pred             cccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCC
Confidence            98743      22234557889999999998899999999999999999998 8888876544333222211     112


Q ss_pred             CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccCC
Q 018244          275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVS  320 (359)
Q Consensus       275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~  320 (359)
                      ...+...+..+.+|+.+||+.||++|||+.++++.|+.+.......
T Consensus       305 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~~~  350 (367)
T 3l9p_A          305 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI  350 (367)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHHH
T ss_pred             CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChhhc
Confidence            2234556778999999999999999999999999999987765443

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=6.2e-48  Score=365.82  Aligned_cols=248  Identities=17%  Similarity=0.175  Sum_probs=207.5

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ..|.+++.||+|+||+||+|.. .+|..+|+|++......  ..+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E   90 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD   90 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence            4688899999999999999984 57889999999765432  34568899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC---CCCCeEEeccCCcccCCCCC
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~---~~~~~kl~DFg~a~~~~~~~  210 (359)
                      |+.+|+|.+++..  ...+++..+..++.||+.||.|||++ +|+||||||+|||++   .++.+||+|||++.......
T Consensus        91 ~~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~-givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~  167 (444)
T 3soa_A           91 LVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQM-GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ  167 (444)
T ss_dssp             CCBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred             eCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence            9999999999874  45699999999999999999999999 999999999999998   46889999999998765432


Q ss_pred             ----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       211 ----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                          ...||+.|+|||++.+..++.++||||||+++|+|++|..||..................  .........++++.
T Consensus       168 ~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~  245 (444)
T 3soa_A          168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD--FPSPEWDTVTPEAK  245 (444)
T ss_dssp             CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC--CCTTTTTTSCHHHH
T ss_pred             ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCC--CCccccccCCHHHH
Confidence                357899999999999889999999999999999999999998776544433322221111  11111235678899


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHH
Q 018244          287 RLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +|+.+||+.||++|||+.+++++
T Consensus       246 ~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          246 DLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHcCCChhHCCCHHHHhcC
Confidence            99999999999999999999985

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=6.8e-49  Score=365.90  Aligned_cols=253  Identities=25%  Similarity=0.359  Sum_probs=212.0

Q ss_pred             CCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ..+|.+.+.||+|+||.||+|... ++..||||.+...... ..+.+.+|+++|+.++||||+++++++...+..++|||
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence            356788899999999999999965 7889999999865322 23468899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC---
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~---  210 (359)
                      |+++|+|.+++.. ....+++..+..++.|++.||+|||++ +++||||||+|||++.++.+||+|||+++......   
T Consensus       193 ~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~  270 (377)
T 3cbl_A          193 LVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESK-CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA  270 (377)
T ss_dssp             CCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred             cCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence            9999999999964 344689999999999999999999999 99999999999999999999999999998654321   


Q ss_pred             ---CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          211 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       211 ---~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                         ...++..|+|||.+.+..++.++||||||+++|||+| |..|+...........     .........+..++.++.
T Consensus       271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~  345 (377)
T 3cbl_A          271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREF-----VEKGGRLPCPELCPDAVF  345 (377)
T ss_dssp             CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHH-----HHTTCCCCCCTTCCHHHH
T ss_pred             cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-----HHcCCCCCCCCCCCHHHH
Confidence               1224667999999998889999999999999999998 8888776543322221     111122234455678899


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          287 RLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      +|+.+||+.||++|||+.++++.|+.+.+
T Consensus       346 ~li~~cl~~dP~~Rps~~~i~~~L~~i~~  374 (377)
T 3cbl_A          346 RLMEQCWAYEPGQRPSFSTIYQELQSIRK  374 (377)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence            99999999999999999999999998865

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.4e-48  Score=356.21  Aligned_cols=257  Identities=15%  Similarity=0.200  Sum_probs=204.4

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCc----ceEE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE----RLLV  131 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----~~lv  131 (359)
                      ...|++++.||+|+||+||+|+.. +..||||++.... .......+|+.+++.++||||+++++++.....    +++|
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv  100 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI  100 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence            357889999999999999999875 6789999997543 234456679999999999999999999987553    6999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC---------CCcccccCCCCCeeeCCCCCeEEeccCC
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK---------ERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---------~~ivH~Dikp~NIll~~~~~~kl~DFg~  202 (359)
                      |||+++|+|.+++..   ..+++..++.++.|++.||.|||+.         .+++||||||+|||++.++.+||+|||+
T Consensus       101 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~  177 (322)
T 3soc_A          101 TAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL  177 (322)
T ss_dssp             EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             EecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCc
Confidence            999999999999953   4599999999999999999999985         2899999999999999999999999999


Q ss_pred             cccCCCC------CCcCCCccccCcccccCC-----CCCCccchhhHHHHHHHHHhCCCCCCcchhHH------H-----
Q 018244          203 MKNSRDG------RSYSTNLAFTPPEYLRTG-----RVTPESVMYSFGTLLLDLLSGKHIPPSHALDL------I-----  260 (359)
Q Consensus       203 a~~~~~~------~~~~~t~~y~aPE~~~~~-----~~~~~~Di~slG~il~elltg~~p~~~~~~~~------~-----  260 (359)
                      ++.....      ....||+.|+|||++.+.     .++.++||||||+++|+|+||+.||.......      .     
T Consensus       178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~  257 (322)
T 3soc_A          178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP  257 (322)
T ss_dssp             CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred             ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence            9764432      235689999999999863     45678899999999999999998886431100      0     


Q ss_pred             -hhhhhhhhccccccCCC-----ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 018244          261 -RDRNIQTLTDSCLEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT  317 (359)
Q Consensus       261 -~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~  317 (359)
                       .................     ....+.++.+|+.+||+.||++|||+.++++.|+.+.+..
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~  320 (322)
T 3soc_A          258 SLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT  320 (322)
T ss_dssp             CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             chhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence             00000001111111111     2245677999999999999999999999999999987654

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=8.3e-48  Score=341.87  Aligned_cols=254  Identities=20%  Similarity=0.308  Sum_probs=213.1

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeC--CcceE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL  130 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l  130 (359)
                      .+..|.+++.||+|+||+||+|+.. +..||||++.....  ...+.+.+|+.+++.++||||+++++++...  ...++
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   86 (271)
T 3kmu_A            8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL   86 (271)
T ss_dssp             CGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred             CHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence            4568899999999999999999985 77899999986543  2345789999999999999999999999887  78899


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~--ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      ||||+++|+|.+++.......+++..++.++.|++.||.|||+. +  ++|+||||+||+++.++.++|+|||++.....
T Consensus        87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~  165 (271)
T 3kmu_A           87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS  165 (271)
T ss_dssp             EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred             eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence            99999999999999865455699999999999999999999998 8  99999999999999999999999988765333


Q ss_pred             CCCcCCCccccCcccccCCCCCC---ccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          209 GRSYSTNLAFTPPEYLRTGRVTP---ESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       209 ~~~~~~t~~y~aPE~~~~~~~~~---~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                       ....+|+.|+|||.+.+..++.   ++||||||+++|+|++|+.||.............    ........+...+.++
T Consensus       166 -~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  240 (271)
T 3kmu_A          166 -PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVA----LEGLRPTIPPGISPHV  240 (271)
T ss_dssp             -TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHH----HSCCCCCCCTTCCHHH
T ss_pred             -cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHH----hcCCCCCCCCCCCHHH
Confidence             3456789999999998765544   7999999999999999999987654333322221    1122233455677889


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          286 VRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      .+++.+||+.||++|||+.++++.|+.+.+
T Consensus       241 ~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          241 SKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            999999999999999999999999998754

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=6e-49  Score=362.61  Aligned_cols=246  Identities=18%  Similarity=0.245  Sum_probs=205.8

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcC-CCcccccccceeeeCCcce
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  129 (359)
                      ...+|++++.||+|+||+||+|.. .+++.||||++....   ....+.+.+|..++..+ +||||+++++++.+.+..+
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  100 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF  100 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence            356789999999999999999995 468899999997532   12345678899999988 6999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC-
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-  208 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~-  208 (359)
                      +||||+++|+|.+++..  ...+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.... 
T Consensus       101 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~  177 (353)
T 3txo_A          101 FVMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDK-GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN  177 (353)
T ss_dssp             EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred             EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence            99999999999999973  45699999999999999999999999 999999999999999999999999999986432 


Q ss_pred             ---CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          209 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       209 ---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                         .....||+.|+|||++.+..++.++||||||+++|||++|..||...............      ...++...+.++
T Consensus       178 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~  251 (353)
T 3txo_A          178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND------EVVYPTWLHEDA  251 (353)
T ss_dssp             --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHH
T ss_pred             CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHH
Confidence               23456899999999999888999999999999999999999999876554443333221      123445567889


Q ss_pred             HHHHHHhcccCCCCCCCH------HHHHHH
Q 018244          286 VRLASRCLQYEPRERPNP------RSLVTA  309 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~------~~il~~  309 (359)
                      .+|+.+||+.||++||++      .+++++
T Consensus       252 ~~li~~lL~~dP~~R~~~~~~~~~~~il~h  281 (353)
T 3txo_A          252 TGILKSFMTKNPTMRLGSLTQGGEHAILRH  281 (353)
T ss_dssp             HHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred             HHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence            999999999999999998      677653

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.8e-48  Score=355.24  Aligned_cols=249  Identities=16%  Similarity=0.177  Sum_probs=209.0

Q ss_pred             CCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      +..|.+.+.||+|+||+||+|... ++..+|+|.+.... .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            467889999999999999999954 68899999997543 3456688999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC--CCCeEEeccCCcccCCCCC--
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRDGR--  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~--~~~~kl~DFg~a~~~~~~~--  210 (359)
                      +++|+|.+++.. ....+++..++.++.|++.||.|||++ +++||||||+|||++.  ++.+||+|||++.......  
T Consensus        83 ~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~  160 (321)
T 1tki_A           83 ISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF  160 (321)
T ss_dssp             CCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred             CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence            999999999953 345799999999999999999999999 9999999999999987  7899999999998765543  


Q ss_pred             -CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       211 -~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                       ...+|+.|+|||++.+..++.++||||||+++|+|++|..||...................  ........+.++.+|+
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~li  238 (321)
T 1tki_A          161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF--DEEAFKEISIEAMDFV  238 (321)
T ss_dssp             EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC--CHHHHTTSCHHHHHHH
T ss_pred             ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCC--ChhhhccCCHHHHHHH
Confidence             3458899999999998889999999999999999999999997765443332222111110  0000123567899999


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 018244          290 SRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+||..||++|||+.+++++
T Consensus       239 ~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          239 DRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             HTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHcCCChhHCcCHHHHhcC
Confidence            99999999999999999986

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=3.1e-48  Score=369.98  Aligned_cols=253  Identities=20%  Similarity=0.303  Sum_probs=214.4

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      ..|.+.+.||+|+||+||+|...++..||||.+.... ...+.+.+|+++|+.++||||+++++++. .+..++||||+.
T Consensus       188 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~  265 (454)
T 1qcf_A          188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMA  265 (454)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred             HHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecC
Confidence            4677888999999999999998888899999998654 34678999999999999999999999986 667999999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-----CC
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RS  211 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-----~~  211 (359)
                      +|+|.+++.......+++..+..++.||+.||+|||++ +++||||||+|||++.++.+||+|||+++.....     ..
T Consensus       266 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~  344 (454)
T 1qcf_A          266 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG  344 (454)
T ss_dssp             TCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred             CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence            99999999754344689999999999999999999999 9999999999999999999999999999875432     23


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ..++..|+|||++....++.++||||||+++|||+| |+.||..............     ......+..++.++.+|+.
T Consensus       345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~li~  419 (454)
T 1qcf_A          345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER-----GYRMPRPENCPEELYNIMM  419 (454)
T ss_dssp             SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHH-----TCCCCCCTTSCHHHHHHHH
T ss_pred             CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHH
Confidence            345678999999998899999999999999999999 8988876543333222111     1222334567788999999


Q ss_pred             HhcccCCCCCCCHHHHHHHHHHhhhcc
Q 018244          291 RCLQYEPRERPNPRSLVTALVTLQKDT  317 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~L~~~~~~~  317 (359)
                      +||+.||++|||+.++++.|+.+....
T Consensus       420 ~cl~~dp~~RPt~~~i~~~L~~~~~~~  446 (454)
T 1qcf_A          420 RCWKNRPEERPTFEYIQSVLDDFYTAT  446 (454)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred             HHccCChhHCcCHHHHHHHHHHHHhcc
Confidence            999999999999999999999886543

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=6.3e-49  Score=352.73  Aligned_cols=255  Identities=22%  Similarity=0.329  Sum_probs=209.8

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CC-------cEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQ-------FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  128 (359)
                      .+|.+.+.||+|+||+||+|... ++       ..||+|.+........+.+.+|+.+++.++||||+++++++...+..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN   87 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence            46888899999999999999843 33       47999999876656677899999999999999999999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCC--------eEEecc
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--------PRLSCF  200 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~--------~kl~DF  200 (359)
                      ++||||+++|+|.+++.. ....+++..+..++.||+.||.|||++ +++||||||+|||++.++.        +||+||
T Consensus        88 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df  165 (289)
T 4fvq_A           88 ILVQEFVKFGSLDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEEN-TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDP  165 (289)
T ss_dssp             EEEEECCTTCBHHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred             EEEEECCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHhhC-CeECCCcCcceEEEecCCcccccccceeeeccC
Confidence            999999999999999975 344589999999999999999999999 9999999999999998877        999999


Q ss_pred             CCcccCCCCCCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCCh
Q 018244          201 GLMKNSRDGRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS  279 (359)
Q Consensus       201 g~a~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (359)
                      |++..........+|..|+|||++.+ ..++.++||||||+++|+|++|..|+...............      ....+.
T Consensus       166 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~------~~~~~~  239 (289)
T 4fvq_A          166 GISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED------RHQLPA  239 (289)
T ss_dssp             CSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT------TCCCCC
T ss_pred             cccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhc------cCCCCC
Confidence            99987766666678899999999987 66899999999999999999976655443222111111110      112233


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccC
Q 018244          280 DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV  319 (359)
Q Consensus       280 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~  319 (359)
                      ..+.++.+|+.+||+.||++|||+.++++.|+.+......
T Consensus       240 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~  279 (289)
T 4fvq_A          240 PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV  279 (289)
T ss_dssp             CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred             CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence            3456799999999999999999999999999998764443

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=3.4e-47  Score=344.44  Aligned_cols=271  Identities=28%  Similarity=0.459  Sum_probs=222.2

Q ss_pred             cccccCHHHHHHHhcCCCccc---ccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCC----CchHHHHHHHHHHHhcCCC
Q 018244           40 VFCEYSIETLRTATSGFAMEN---IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRN  112 (359)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~---~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h  112 (359)
                      ....|+..++..++++|+...   ..+.||+|+||.||+|.. ++..||+|++....    ....+.+.+|+.+++.++|
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            356789999999999997652   225679999999999987 56789999987532    2235678999999999999


Q ss_pred             cccccccceeeeCCcceEEEecCCCCCHhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC
Q 018244          113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW-ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD  191 (359)
Q Consensus       113 ~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~  191 (359)
                      |||+++++++...+..++||||+++++|.+++... ....+++..++.++.|++.||.|||+. +++|+||||+||+++.
T Consensus        90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dlkp~Nili~~  168 (307)
T 2nru_A           90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN-HHIHRDIKSANILLDE  168 (307)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECT
T ss_pred             CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecCCCCHHHEEEcC
Confidence            99999999999999999999999999999998643 245689999999999999999999999 9999999999999999


Q ss_pred             CCCeEEeccCCcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHH----Hh
Q 018244          192 DVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL----IR  261 (359)
Q Consensus       192 ~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~----~~  261 (359)
                      ++.+||+|||++......      ....||+.|+|||.+.+ .++.++||||||+++|+|++|..||.......    +.
T Consensus       169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~  247 (307)
T 2nru_A          169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK  247 (307)
T ss_dssp             TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred             CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence            999999999998765432      23468999999998874 58899999999999999999998886532211    10


Q ss_pred             hh------hhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 018244          262 DR------NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ  314 (359)
Q Consensus       262 ~~------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~  314 (359)
                      ..      ......+.. ....+...+..+.+++.+||+.||++|||+.++++.|+.+.
T Consensus       248 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          248 EEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HHHHTTSCCHHHHSCSS-CSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             HHhhhhhhhhhhhcccc-ccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            00      011111111 12345677889999999999999999999999999999874

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=5.6e-48  Score=367.71  Aligned_cols=253  Identities=25%  Similarity=0.352  Sum_probs=212.8

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCC-cceEEEe
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-ERLLVAE  133 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e  133 (359)
                      +...|.+++.||+|+||.||+|... +..||||+++...  ..+.+.+|+++|+.++||||+++++++.... ..++|||
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e  267 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE  267 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence            4567889999999999999999975 6689999998654  4567899999999999999999999987665 7899999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-CCc
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY  212 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-~~~  212 (359)
                      |+++|+|.+++.......+++..+..++.||+.||+|||++ +++||||||+|||++.++.+||+|||+++..... ...
T Consensus       268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  346 (450)
T 1k9a_A          268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG  346 (450)
T ss_dssp             CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred             ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC
Confidence            99999999999865455589999999999999999999999 9999999999999999999999999999865433 233


Q ss_pred             CCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       213 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      .++..|+|||.+.+..++.++||||||+++|||+| |..||............     ........+..++.++.+||.+
T Consensus       347 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-----~~~~~~~~p~~~~~~l~~li~~  421 (450)
T 1k9a_A          347 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-----EKGYKMDAPDGCPPAVYDVMKN  421 (450)
T ss_dssp             CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHH-----HTTCCCCCCTTCCHHHHHHHHH
T ss_pred             CCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-----HcCCCCCCCCcCCHHHHHHHHH
Confidence            56789999999999999999999999999999998 99888754332222111     1112233456677899999999


Q ss_pred             hcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          292 CLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      ||+.||++|||+.++++.|+.+...
T Consensus       422 cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          422 CWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HcCCChhHCcCHHHHHHHHHHHHHh
Confidence            9999999999999999999988654

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.2e-47  Score=358.21  Aligned_cols=258  Identities=21%  Similarity=0.288  Sum_probs=215.9

Q ss_pred             CcccccccCCCCCCcEEEEEEeC--------CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcC-CCcccccccceeeeCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGD  126 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~  126 (359)
                      ..|.+.+.||+|+||+||+|...        .+..||||++...... ....+.+|+++++.+ +||||+++++++...+
T Consensus        69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~  148 (382)
T 3tt0_A           69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG  148 (382)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence            57888899999999999999842        2357999999865433 346789999999999 8999999999999999


Q ss_pred             cceEEEecCCCCCHhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC
Q 018244          127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD  192 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~  192 (359)
                      ..++||||+++|+|.+++....              ...+++..++.++.||+.||.|||+. +|+||||||+|||++.+
T Consensus       149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~  227 (382)
T 3tt0_A          149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTED  227 (382)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTT
T ss_pred             ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCcceEEEcCC
Confidence            9999999999999999997543              24589999999999999999999999 99999999999999999


Q ss_pred             CCeEEeccCCcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhh
Q 018244          193 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI  265 (359)
Q Consensus       193 ~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~  265 (359)
                      +.+||+|||+++.....      ....+|+.|+|||++.+..++.++||||||+++|+|++ |..||.............
T Consensus       228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~  307 (382)
T 3tt0_A          228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK  307 (382)
T ss_dssp             CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred             CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            99999999999865432      23345788999999999999999999999999999999 888887654443322221


Q ss_pred             hhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccCC
Q 018244          266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVS  320 (359)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~  320 (359)
                      .     ......+...+.++.+|+.+||+.||++|||+.++++.|+.+.......
T Consensus       308 ~-----~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~  357 (382)
T 3tt0_A          308 E-----GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ  357 (382)
T ss_dssp             T-----TCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSC
T ss_pred             c-----CCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcC
Confidence            1     1222334556788999999999999999999999999999987654433

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=2.8e-48  Score=359.55  Aligned_cols=251  Identities=17%  Similarity=0.130  Sum_probs=197.8

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ....|.+++.||+|+||+||+|... +++.||||++..... ..+.+.+|+.+++.++||||+++++++......++|||
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   96 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME   96 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence            4567999999999999999999954 788999999976543 24568899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCC--eEEeccCCcccCCC---
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--PRLSCFGLMKNSRD---  208 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~--~kl~DFg~a~~~~~---  208 (359)
                      |+.+|+|.+++..  ...+++..++.++.|++.||.|||++ ||+||||||+|||++.++.  +||+|||+++....   
T Consensus        97 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~-~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~  173 (361)
T 3uc3_A           97 YASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSM-QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ  173 (361)
T ss_dssp             CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred             eCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCceEEEeecCccccccccCC
Confidence            9999999999863  45699999999999999999999999 9999999999999987765  99999999875332   


Q ss_pred             CCCcCCCccccCcccccCCCCCCc-cchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          209 GRSYSTNLAFTPPEYLRTGRVTPE-SVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       209 ~~~~~~t~~y~aPE~~~~~~~~~~-~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                      .....||+.|+|||++.+..++.+ +||||||+++|+|++|+.||...............+.............+.++.+
T Consensus       174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  253 (361)
T 3uc3_A          174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCH  253 (361)
T ss_dssp             -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHH
T ss_pred             CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHH
Confidence            234578999999999988877665 8999999999999999999875422111111111121111111112245678999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~  309 (359)
                      |+.+||+.||++|||+.+++++
T Consensus       254 li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          254 LISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             HHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHccCChhHCcCHHHHHhC
Confidence            9999999999999999999976

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=7e-48  Score=354.30  Aligned_cols=260  Identities=22%  Similarity=0.291  Sum_probs=214.9

Q ss_pred             HhcCCCcccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeee
Q 018244           52 ATSGFAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCE  124 (359)
Q Consensus        52 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~  124 (359)
                      ..-....|.+++.||+|+||.||+|...      ++..||||++...... ..+.+.+|+.+++.++||||+++++++..
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  121 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV  121 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence            3344567889999999999999999963      3478999999865433 34678999999999999999999999999


Q ss_pred             CCcceEEEecCCCCCHhhhhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccC
Q 018244          125 GDERLLVAEYMPNDTLAKHLFHWE----------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDL  182 (359)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Di  182 (359)
                      .+..++||||+++|+|.+++....                      ...+++..++.++.||+.||.|||++ +++|+||
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dl  200 (343)
T 1luf_A          122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-KFVHRDL  200 (343)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCC
T ss_pred             CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCC
Confidence            999999999999999999997532                      25789999999999999999999999 9999999


Q ss_pred             CCCCeeeCCCCCeEEeccCCcccCCC------CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcc
Q 018244          183 NAYRIVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (359)
Q Consensus       183 kp~NIll~~~~~~kl~DFg~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~  255 (359)
                      ||+||+++.++.+||+|||++.....      .....+|+.|+|||++.+..++.++||||||+++|+|++ |..||...
T Consensus       201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  280 (343)
T 1luf_A          201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM  280 (343)
T ss_dssp             SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence            99999999999999999999875432      223456889999999998889999999999999999999 88888765


Q ss_pred             hhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 018244          256 ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT  317 (359)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~  317 (359)
                      ............     .....+...+.++.+|+.+||+.||++|||+.++++.|+.+....
T Consensus       281 ~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~  337 (343)
T 1luf_A          281 AHEEVIYYVRDG-----NILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA  337 (343)
T ss_dssp             CHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred             ChHHHHHHHhCC-----CcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence            443332221111     112234556778999999999999999999999999999986543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=6e-48  Score=352.63  Aligned_cols=247  Identities=17%  Similarity=0.165  Sum_probs=206.3

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc------hHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .|.+.+.||+|+||.||+|.. .++..||+|.+......      ..+.+.+|+.+|+.++||||+++++++......++
T Consensus        12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   91 (326)
T 2y0a_A           12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL   91 (326)
T ss_dssp             HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            578888999999999999995 46889999999764322      35678999999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC----CeEEeccCCcccC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS  206 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~----~~kl~DFg~a~~~  206 (359)
                      ||||+++++|.+++.  ....+++..+..++.||+.||.|||+. +++||||||+|||++.++    .+||+|||++...
T Consensus        92 v~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~  168 (326)
T 2y0a_A           92 ILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI  168 (326)
T ss_dssp             EEECCCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred             EEEcCCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHC-CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeEC
Confidence            999999999999996  456799999999999999999999999 999999999999999877    8999999999876


Q ss_pred             CCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                      ...   ....||+.|+|||++.+..++.++||||||+++|+|++|..||.................  ..........+.
T Consensus       169 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  246 (326)
T 2y0a_A          169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY--EFEDEYFSNTSA  246 (326)
T ss_dssp             CTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCC--CCCHHHHTTSCH
T ss_pred             CCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCC--CcCccccccCCH
Confidence            433   345689999999999988999999999999999999999999876543332221111100  000001123467


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+.+|+.+||+.||++|||+.+++++
T Consensus       247 ~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          247 LAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhcC
Confidence            89999999999999999999999974

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=7.8e-48  Score=349.58  Aligned_cols=252  Identities=19%  Similarity=0.226  Sum_probs=202.6

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      -...|++++.||+|+||+||+|...++..||+|++......  ....+.+|+++++.++||||+++++++.+....++||
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   98 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF   98 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence            34789999999999999999999888999999999754322  2456889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---  209 (359)
                      ||+++ +|.+++.. ....+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++......   
T Consensus        99 e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~  175 (311)
T 3niz_A           99 EFMEK-DLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQH-RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS  175 (311)
T ss_dssp             ECCSE-EHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred             cCCCC-CHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCchHhEEECCCCCEEEccCcCceecCCCccc
Confidence            99985 78888864 445699999999999999999999999 9999999999999999999999999999875432   


Q ss_pred             -CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccc--------------
Q 018244          210 -RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL--------------  273 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--------------  273 (359)
                       ....+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||..................+..              
T Consensus       176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  255 (311)
T 3niz_A          176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ  255 (311)
T ss_dssp             --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHS
T ss_pred             ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhh
Confidence             33467999999999876 45899999999999999999999998754322221111110000000              


Q ss_pred             ---c--C-----CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          274 ---E--G-----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       274 ---~--~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                         .  .     ......++++.+|+.+||+.||++|||+.+++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  301 (311)
T 3niz_A          256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH  301 (311)
T ss_dssp             CCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             cccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence               0  0     0012345789999999999999999999999873

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=8.2e-48  Score=356.52  Aligned_cols=248  Identities=18%  Similarity=0.210  Sum_probs=207.3

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ..|.+++.||+|+||.||+|.. .++..||+|++.....  ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e  108 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD  108 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            3588889999999999999995 4688999999976543  234678899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC---CCeEEeccCCcccCCCCC
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~---~~~kl~DFg~a~~~~~~~  210 (359)
                      |+.+|+|.+++.  ....+++..+..++.||+.||.|||++ +|+||||||+|||++.+   +.+||+|||++.......
T Consensus       109 ~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~  185 (362)
T 2bdw_A          109 LVTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE  185 (362)
T ss_dssp             CCCSCBHHHHHT--TCSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC
T ss_pred             cCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc
Confidence            999999999986  445789999999999999999999999 99999999999999865   459999999998765443


Q ss_pred             ---CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          211 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       211 ---~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                         ...||+.|+|||++.+..++.++||||||+++|+|++|..||..................  .........+.++.+
T Consensus       186 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~  263 (362)
T 2bdw_A          186 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAKS  263 (362)
T ss_dssp             SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTGGGGSCHHHHH
T ss_pred             ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC--CCcccccCCCHHHHH
Confidence               357899999999999889999999999999999999999998765443332222111111  011111345788999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~  309 (359)
                      |+.+||+.||++|||+.+++++
T Consensus       264 li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          264 LIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             HHHHHSCSSGGGSCCHHHHTTS
T ss_pred             HHHHHcCCChhhCcCHHHHhcC
Confidence            9999999999999999999875

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=5.4e-48  Score=359.37  Aligned_cols=248  Identities=17%  Similarity=0.223  Sum_probs=206.1

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      ++.+|.+++.||+|+||.||+|.. .+++.||+|++....   ......+.+|+++|+.++||||+++++++.+.+..++
T Consensus        13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l   92 (384)
T 4fr4_A           13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM   92 (384)
T ss_dssp             CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            467899999999999999999995 468899999987532   2235678899999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-  209 (359)
                      ||||+.+|+|.+++.  ....+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++...... 
T Consensus        93 v~e~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~  169 (384)
T 4fr4_A           93 VVDLLLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQ-RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET  169 (384)
T ss_dssp             EECCCTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred             EEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence            999999999999997  456799999999999999999999999 9999999999999999999999999999876443 


Q ss_pred             --CCcCCCccccCcccccC---CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHH
Q 018244          210 --RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE  284 (359)
Q Consensus       210 --~~~~~t~~y~aPE~~~~---~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (359)
                        ....||+.|+|||++.+   ..++.++|||||||++|+|++|..||.......... ....+..  ....++...+.+
T Consensus       170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~-~~~~~~~--~~~~~p~~~s~~  246 (384)
T 4fr4_A          170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKE-IVHTFET--TVVTYPSAWSQE  246 (384)
T ss_dssp             CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHH-HHHHHHH--CCCCCCTTSCHH
T ss_pred             ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHH-HHHHHhh--cccCCCCcCCHH
Confidence              35678999999999974   458999999999999999999999986432211110 0111111  112345567789


Q ss_pred             HHHHHHHhcccCCCCCCC-HHHHHH
Q 018244          285 LVRLASRCLQYEPRERPN-PRSLVT  308 (359)
Q Consensus       285 l~~li~~cl~~dp~~Rps-~~~il~  308 (359)
                      +.+|+.+||+.||++||+ ++++++
T Consensus       247 ~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          247 MVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             HHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             HHHHHHHHhcCCHhHhcccHHHHHc
Confidence            999999999999999998 666654

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=5.3e-48  Score=348.59  Aligned_cols=249  Identities=17%  Similarity=0.223  Sum_probs=197.7

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhc--CCCcccccccceeeeC----CcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQ--LRNRRLANLLGCCCEG----DERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~----~~~~l  130 (359)
                      .+|.+++.||+|+||+||+|+. ++..||||++...   ....+.+|.+++..  ++||||+++++++...    ...++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l   83 (301)
T 3q4u_A            8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL   83 (301)
T ss_dssp             GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred             CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence            4688899999999999999988 6788999999753   34455666666666  7899999999987553    45899


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCcccccCCCCCeeeCCCCCeEEeccCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT--------SKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~ivH~Dikp~NIll~~~~~~kl~DFg~  202 (359)
                      ||||+++|+|.+++   ....+++..++.++.|++.||.|||        +. +++||||||+|||++.++.+||+|||+
T Consensus        84 v~e~~~~g~L~~~l---~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~  159 (301)
T 3q4u_A           84 ITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP-AIAHRDLKSKNILVKKNGQCCIADLGL  159 (301)
T ss_dssp             EECCCTTCBHHHHH---TTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC-EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             ehhhccCCCHHHHH---hhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC-CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence            99999999999999   4557999999999999999999999        88 999999999999999999999999999


Q ss_pred             cccCCCC--------CCcCCCccccCcccccCC------CCCCccchhhHHHHHHHHHhC----------CCCCCcchh-
Q 018244          203 MKNSRDG--------RSYSTNLAFTPPEYLRTG------RVTPESVMYSFGTLLLDLLSG----------KHIPPSHAL-  257 (359)
Q Consensus       203 a~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~Di~slG~il~elltg----------~~p~~~~~~-  257 (359)
                      ++.....        ....||+.|+|||++.+.      .++.++||||||+++|||+||          ..||..... 
T Consensus       160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~  239 (301)
T 3q4u_A          160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN  239 (301)
T ss_dssp             CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred             eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence            8754332        233789999999999876      455789999999999999999          766643211 


Q ss_pred             ----HHHhhhhhhhhcccccc-CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          258 ----DLIRDRNIQTLTDSCLE-GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       258 ----~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                          .............+... ...+...+.++.+|+.+||+.||++|||+.++++.|+.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             CcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence                11111111000011000 112245778999999999999999999999999999876

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=1.2e-47  Score=341.25  Aligned_cols=250  Identities=20%  Similarity=0.263  Sum_probs=200.2

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc----hHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP----DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      ++..|.+.+.||+|+||.||+|... +..||||++......    ..+.+.+|+++++.++||||+++++++...+..++
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (271)
T 3dtc_A            5 DFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL   83 (271)
T ss_dssp             CTTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred             chhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence            4578889999999999999999974 778999998764322    24678899999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC---cccccCCCCCeeeCC--------CCCeEEec
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER---ALYHDLNAYRIVFDD--------DVNPRLSC  199 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~---ivH~Dikp~NIll~~--------~~~~kl~D  199 (359)
                      ||||+++++|.+++   ....+++..++.++.|++.||.|||++ +   ++|+||||+||+++.        ++.+||+|
T Consensus        84 v~e~~~~~~L~~~~---~~~~~~~~~~~~i~~~l~~~l~~lH~~-~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D  159 (271)
T 3dtc_A           84 VMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDE-AIVPIIHRDLKSSNILILQKVENGDLSNKILKITD  159 (271)
T ss_dssp             EEECCTTEEHHHHH---TSSCCCHHHHHHHHHHHHHHHHHHHHS-SSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred             EEEcCCCCCHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence            99999999999998   456799999999999999999999999 8   899999999999986        77899999


Q ss_pred             cCCcccCCCC--CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCC
Q 018244          200 FGLMKNSRDG--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF  277 (359)
Q Consensus       200 Fg~a~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (359)
                      ||++......  ....+|+.|+|||.+.+..++.++||||||+++|+|++|+.||.............    ........
T Consensus       160 fg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~----~~~~~~~~  235 (271)
T 3dtc_A          160 FGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA----MNKLALPI  235 (271)
T ss_dssp             CCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH----TSCCCCCC
T ss_pred             CCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhh----cCCCCCCC
Confidence            9999865433  24568999999999998889999999999999999999999987654332222111    11122234


Q ss_pred             ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      +...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus       236 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          236 PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            456678899999999999999999999999999754

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1e-47  Score=346.60  Aligned_cols=246  Identities=15%  Similarity=0.181  Sum_probs=200.1

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc--------------------------hHHHHHHHHHHHh
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--------------------------DARQFLEEARAVG  108 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~e~~~l~  108 (359)
                      ...|.+++.||+|+||.||+|.. .++..||||++......                          ..+.+.+|+++|+
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            46788999999999999999985 56889999999754311                          1245889999999


Q ss_pred             cCCCcccccccceeee--CCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCC
Q 018244          109 QLRNRRLANLLGCCCE--GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR  186 (359)
Q Consensus       109 ~l~h~niv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~N  186 (359)
                      .++||||+++++++.+  ....++||||+++++|.+++   ....+++..+..++.|++.||.|||++ +++||||||+|
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~N  167 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQ-KIIHRDIKPSN  167 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGG
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHH
Confidence            9999999999999986  56789999999999998876   456799999999999999999999999 99999999999


Q ss_pred             eeeCCCCCeEEeccCCcccCCCC----CCcCCCccccCcccccCCC---CCCccchhhHHHHHHHHHhCCCCCCcchhHH
Q 018244          187 IVFDDDVNPRLSCFGLMKNSRDG----RSYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHALDL  259 (359)
Q Consensus       187 Ill~~~~~~kl~DFg~a~~~~~~----~~~~~t~~y~aPE~~~~~~---~~~~~Di~slG~il~elltg~~p~~~~~~~~  259 (359)
                      ||++.++.+||+|||++......    ....||+.|+|||++.+..   ++.++||||||+++|+|++|..||.......
T Consensus       168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~  247 (298)
T 2zv2_A          168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC  247 (298)
T ss_dssp             EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH
Confidence            99999999999999999876543    2456899999999998765   3778999999999999999999987654433


Q ss_pred             HhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          260 IRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .........    .........+.++.+|+.+||+.||++|||+.+++++
T Consensus       248 ~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h  293 (298)
T 2zv2_A          248 LHSKIKSQA----LEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH  293 (298)
T ss_dssp             HHHHHHHCC----CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred             HHHHHhccc----CCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence            322221111    1111123456789999999999999999999999763

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=6.4e-48  Score=358.66  Aligned_cols=254  Identities=22%  Similarity=0.287  Sum_probs=203.0

Q ss_pred             CcccccccCCCCCCcEEEEEEeC----CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      ..|.+.+.||+|+||.||+|+..    ++..||||.+..... ...+.+.+|+.+++.++||||+++++++......++|
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence            45778888999999999999854    567899999986533 2355789999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-  210 (359)
                      |||+++|+|.+++.. ....+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++...... 
T Consensus       125 ~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  202 (373)
T 2qol_A          125 TEYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE  202 (373)
T ss_dssp             EECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             EeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCcceEEEcCCCCEEECcCccccccccCCc
Confidence            999999999999964 445799999999999999999999999 99999999999999999999999999998754432 


Q ss_pred             ------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       211 ------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                            ...++..|+|||++.+..++.++||||||+++|||++ |..||.............     .......+...+.
T Consensus       203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~-----~~~~~~~~~~~~~  277 (373)
T 2qol_A          203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-----EGYRLPPPMDCPA  277 (373)
T ss_dssp             -----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHH-----TTEECCCCTTCBH
T ss_pred             cceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----cCCCCCCCccccH
Confidence                  1123568999999998899999999999999999998 888886554333222211     1122233455678


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT  317 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~  317 (359)
                      .+.+++.+||+.||++|||+.++++.|+.+....
T Consensus       278 ~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~  311 (373)
T 2qol_A          278 ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP  311 (373)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence            8999999999999999999999999999987653

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=5.7e-48  Score=355.76  Aligned_cols=246  Identities=17%  Similarity=0.173  Sum_probs=210.7

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      ...+|.+++.||+|+||.||+|.. .+|..||+|++....   ....+.+.+|+++|+.++||||+++++++.+....++
T Consensus        39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  118 (350)
T 1rdq_E           39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM  118 (350)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence            456789999999999999999995 468899999997532   1235678899999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-  209 (359)
                      ||||+++|+|.+++..  ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..... 
T Consensus       119 v~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~  195 (350)
T 1rdq_E          119 VMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT  195 (350)
T ss_dssp             EEECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred             EEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCccceEEECCCCCEEEcccccceeccCCc
Confidence            9999999999999974  35699999999999999999999999 9999999999999999999999999999876543 


Q ss_pred             CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ....||+.|+|||++.+..++.++||||||+++|+|++|..||...............      ...++...+.++.+|+
T Consensus       196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li  269 (350)
T 1rdq_E          196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG------KVRFPSHFSSDLKDLL  269 (350)
T ss_dssp             CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTCCHHHHHHH
T ss_pred             ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHH
Confidence            3557899999999999999999999999999999999999998766443332222211      1234456778899999


Q ss_pred             HHhcccCCCCCCC-----HHHHHHH
Q 018244          290 SRCLQYEPRERPN-----PRSLVTA  309 (359)
Q Consensus       290 ~~cl~~dp~~Rps-----~~~il~~  309 (359)
                      .+||+.||++||+     +.+++++
T Consensus       270 ~~lL~~dp~~R~~~~~~~~~ei~~h  294 (350)
T 1rdq_E          270 RNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             HHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             HHHhhcCHHhccCCccCCHHHHHhC
Confidence            9999999999998     8888764

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.2e-47  Score=340.23  Aligned_cols=252  Identities=21%  Similarity=0.313  Sum_probs=214.5

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      ...|.+++.||+|+||.||+|...++..||+|.+..... ..+.+.+|+++++.++||||+++++++...+..++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM   85 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred             hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence            467889999999999999999988888999999987553 3567899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-----C
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-----~  210 (359)
                      ++++|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++......     .
T Consensus        86 ~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~  163 (267)
T 3t9t_A           86 EHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  163 (267)
T ss_dssp             TTCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred             CCCcHHHHHhh-CcccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence            99999999965 345689999999999999999999999 9999999999999999999999999998865432     2


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ...++..|+|||.+.+..++.++||||||+++|+|++ |..||...............     .....+...+..+.+++
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li  238 (267)
T 3t9t_A          164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-----FRLYKPRLASTHVYQIM  238 (267)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHH
T ss_pred             cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcC-----CcCCCCccCcHHHHHHH
Confidence            3456778999999998889999999999999999999 78877655433322221111     11223345567899999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          290 SRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      .+||+.||++|||+.++++.|+.+.+
T Consensus       239 ~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          239 NHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHccCChhhCcCHHHHHHHHHHHHh
Confidence            99999999999999999999999865

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=2.9e-47  Score=341.62  Aligned_cols=252  Identities=22%  Similarity=0.360  Sum_probs=206.9

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCch-------HHHHHHHHHHHhcCCCcccccccceeeeCCc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-------ARQFLEEARAVGQLRNRRLANLLGCCCEGDE  127 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  127 (359)
                      -..|++.+.||+|+||+||+|.. .++..||+|++.......       .+.+.+|+++++.++||||+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            35788899999999999999995 578899999997543322       157889999999999999999999986544 


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccCCCCCeeeCCCCC-----eEEecc
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVN-----PRLSCF  200 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~--ivH~Dikp~NIll~~~~~-----~kl~DF  200 (359)
                       ++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+. +  ++|+||||+||+++.++.     +||+||
T Consensus        97 -~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df  173 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF  173 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred             -eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhC-CCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence             799999999999998865 455799999999999999999999999 8  999999999999988776     999999


Q ss_pred             CCcccCCCC-CCcCCCccccCccccc--CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCC
Q 018244          201 GLMKNSRDG-RSYSTNLAFTPPEYLR--TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF  277 (359)
Q Consensus       201 g~a~~~~~~-~~~~~t~~y~aPE~~~--~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (359)
                      |+++..... ....+|+.|+|||++.  ...++.++||||||+++|+|++|+.||..........  .............
T Consensus       174 g~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~  251 (287)
T 4f0f_A          174 GLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF--INMIREEGLRPTI  251 (287)
T ss_dssp             TTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH--HHHHHHSCCCCCC
T ss_pred             CccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH--HHHHhccCCCCCC
Confidence            999865443 3456899999999984  4457899999999999999999999986543222211  1111122223344


Q ss_pred             ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      +...++++.+++.+||+.||++|||+.++++.|+.+
T Consensus       252 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          252 PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            566778899999999999999999999999999864

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=1.2e-47  Score=345.06  Aligned_cols=250  Identities=17%  Similarity=0.195  Sum_probs=201.3

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      .+|++++.||+|+||+||+|.. .+++.||+|++......  ....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            5788999999999999999995 46889999999765432  24678899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |+++ +|.+++.. ....+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++......    
T Consensus        82 ~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~-~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  158 (292)
T 3o0g_A           82 FCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY  158 (292)
T ss_dssp             CCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC
T ss_pred             cCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccceecCCccccc
Confidence            9976 66666654 456799999999999999999999999 9999999999999999999999999999865432    


Q ss_pred             CCcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcc-hhHHHhhhhhhhhcccc---------------
Q 018244          210 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNIQTLTDSC---------------  272 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~-~~~~~~~~~~~~~~~~~---------------  272 (359)
                      ....+|+.|+|||++.+.. ++.++||||||+++|+|++|..|+... ...............+.               
T Consensus       159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  238 (292)
T 3o0g_A          159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP  238 (292)
T ss_dssp             CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred             cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccc
Confidence            3456789999999998766 899999999999999999988875433 22111111111000000               


Q ss_pred             --------ccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          273 --------LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       273 --------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                              .........+.++.+|+.+||+.||++|||+++++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  283 (292)
T 3o0g_A          239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence                    0001123456789999999999999999999999863

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=5.4e-48  Score=360.57  Aligned_cols=244  Identities=16%  Similarity=0.225  Sum_probs=201.4

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc---hHHHHHHHHHHHhcC-CCcccccccceeeeCCcce
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP---DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  129 (359)
                      ...+|++++.||+|+||+||+|+.. +++.||+|++......   ..+.+.+|..+|..+ +||||+++++++.+.+.++
T Consensus        50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  129 (396)
T 4dc2_A           50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF  129 (396)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence            4567899999999999999999954 6889999999764322   234578899999887 8999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC-
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-  208 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~-  208 (359)
                      +||||+++|+|..++..  ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.... 
T Consensus       130 lV~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~  206 (396)
T 4dc2_A          130 FVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP  206 (396)
T ss_dssp             EEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EEEEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence            99999999999999873  45799999999999999999999999 999999999999999999999999999986322 


Q ss_pred             ---CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHh-----hhhhhhhccccccCCCChH
Q 018244          209 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR-----DRNIQTLTDSCLEGQFSSD  280 (359)
Q Consensus       209 ---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~  280 (359)
                         .....||+.|+|||++.+..++.++||||||+++|||++|+.||.........     ......+..  ....++..
T Consensus       207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~  284 (396)
T 4dc2_A          207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRS  284 (396)
T ss_dssp             TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCCCTT
T ss_pred             CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCCCCc
Confidence               23557899999999999999999999999999999999999998532111100     001111111  12234566


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCH
Q 018244          281 EGTELVRLASRCLQYEPRERPNP  303 (359)
Q Consensus       281 ~~~~l~~li~~cl~~dp~~Rps~  303 (359)
                      .+.++.+|+.+||+.||++||++
T Consensus       285 ~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          285 LSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             CCHHHHHHHHHHhcCCHhHcCCC
Confidence            78899999999999999999996

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=2.3e-48  Score=357.43  Aligned_cols=245  Identities=18%  Similarity=0.219  Sum_probs=207.3

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcC-CCcccccccceeeeCCcce
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  129 (359)
                      ...+|.+++.||+|+||.||+|.. .+++.||||++....   ....+.+.+|..++..+ +||||+++++++.+.+..+
T Consensus        15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~   94 (345)
T 1xjd_A           15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF   94 (345)
T ss_dssp             -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence            456788999999999999999996 468899999997532   22355678899999877 8999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC-
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-  208 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~-  208 (359)
                      +||||+++|+|.+++..  ...+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++.... 
T Consensus        95 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  171 (345)
T 1xjd_A           95 FVMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG  171 (345)
T ss_dssp             EEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence            99999999999999963  35699999999999999999999999 999999999999999999999999999986432 


Q ss_pred             ---CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          209 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       209 ---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                         .....||+.|+|||++.+..++.++||||||+++|+|++|..||...............      ...++...+.++
T Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~  245 (345)
T 1xjd_A          172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD------NPFYPRWLEKEA  245 (345)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHH
T ss_pred             CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC------CCCCCcccCHHH
Confidence               23557899999999999999999999999999999999999999766544333222211      123445577889


Q ss_pred             HHHHHHhcccCCCCCCCHH-HHHH
Q 018244          286 VRLASRCLQYEPRERPNPR-SLVT  308 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~~-~il~  308 (359)
                      .+|+.+||..||++||++. ++++
T Consensus       246 ~~li~~lL~~dp~~R~~~~~~i~~  269 (345)
T 1xjd_A          246 KDLLVKLFVREPEKRLGVRGDIRQ  269 (345)
T ss_dssp             HHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             HHHHHHHhcCCHhHcCCChHHHHc
Confidence            9999999999999999997 6654

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=6.3e-48  Score=371.42  Aligned_cols=253  Identities=21%  Similarity=0.345  Sum_probs=215.8

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCC-CcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ..+|.+.+.||+|+||.||+|.+.. +..||||.+.... ...+.+.+|+.+|+.++||||+++++++......+|||||
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~  297 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF  297 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence            3567888999999999999999654 8899999998654 3467899999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----  210 (359)
                      +++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......    
T Consensus       298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  376 (495)
T 1opk_A          298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  376 (495)
T ss_dssp             CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECC
T ss_pred             cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChhhEEECCCCcEEEeecccceeccCCceeec
Confidence            9999999999865667799999999999999999999999 99999999999999999999999999998764332    


Q ss_pred             -CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       211 -~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                       ...++..|+|||++.+..++.++||||||+++|||+| |..||..........     .+........+..++.++.+|
T Consensus       377 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~l  451 (495)
T 1opk_A          377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-----LLEKDYRMERPEGCPEKVYEL  451 (495)
T ss_dssp             TTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-----HHHTTCCCCCCTTCCHHHHHH
T ss_pred             CCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHHcCCCCCCCCCCCHHHHHH
Confidence             2334678999999998889999999999999999999 888876654332221     112222233455677889999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          289 ASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      |.+||+.||++|||+.++++.|+.+..
T Consensus       452 i~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          452 MRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             HHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence            999999999999999999999998754

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=9.5e-48  Score=358.60  Aligned_cols=250  Identities=19%  Similarity=0.157  Sum_probs=209.8

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      +..|.+++.||+|+||.||+|.. .++..||+|++..........+.+|+.+|+.++||||+++++++.+....++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            35688999999999999999995 46889999999876555566789999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC--CCCeEEeccCCcccCCCCC--
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRDGR--  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~--~~~~kl~DFg~a~~~~~~~--  210 (359)
                      +.+|+|.+++.. ....+++..+..++.||+.||.|||++ +|+||||||+|||++.  ++.+||+|||+++......  
T Consensus       130 ~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~  207 (387)
T 1kob_A          130 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV  207 (387)
T ss_dssp             CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred             CCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence            999999999864 345799999999999999999999999 9999999999999974  5779999999998765443  


Q ss_pred             -CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       211 -~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                       ...||+.|+|||++.+..++.++||||||+++|+|++|..||................  ...........+.++.+|+
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~~~~~li  285 (387)
T 1kob_A          208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCD--WEFDEDAFSSVSPEAKDFI  285 (387)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCC--CCCCSSTTTTSCHHHHHHH
T ss_pred             eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCccccccCCHHHHHHH
Confidence             3468999999999998899999999999999999999999987654332222111110  0111122345678899999


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 018244          290 SRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+||+.||++|||+.+++++
T Consensus       286 ~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          286 KNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             HTTSCSSGGGSCCHHHHHTS
T ss_pred             HHHcCCChhHCcCHHHHhhC
Confidence            99999999999999999975

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=3.5e-48  Score=353.71  Aligned_cols=248  Identities=17%  Similarity=0.137  Sum_probs=203.0

Q ss_pred             CCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      +.+|++++.||+|+||+||+|... +++.||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            467899999999999999999954 7889999999754332 23568899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |+++|+|.+++.  ....+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||++......    
T Consensus        86 ~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  162 (323)
T 3tki_A           86 YCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  162 (323)
T ss_dssp             CCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             cCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence            999999999986  455699999999999999999999999 9999999999999999999999999999764322    


Q ss_pred             --CCcCCCccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          210 --RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       210 --~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                        ....||+.|+|||++.+..+ +.++||||||+++|+|++|..||...........   ...............+..+.
T Consensus       163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  239 (323)
T 3tki_A          163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---DWKEKKTYLNPWKKIDSAPL  239 (323)
T ss_dssp             CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHH---HHHTTCTTSTTGGGSCHHHH
T ss_pred             ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHH---HHhcccccCCccccCCHHHH
Confidence              24578999999999987775 7789999999999999999999865432111100   01111111111244667899


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHH
Q 018244          287 RLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +|+.+||+.||++|||+.+++++
T Consensus       240 ~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          240 ALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHccCChhhCcCHHHHhhC
Confidence            99999999999999999999875

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.2e-47  Score=344.51  Aligned_cols=250  Identities=17%  Similarity=0.227  Sum_probs=202.0

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ..|.+++.||+|+||+||+|...++..||+|++......  ....+.+|+++++.++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            578899999999999999999878899999999765422  246788999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----C
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~  210 (359)
                      +++ +|.+++.. ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++......    .
T Consensus        82 ~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  158 (288)
T 1ob3_A           82 LDQ-DLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT  158 (288)
T ss_dssp             CSE-EHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred             cCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEEeECccccccCccccccc
Confidence            976 89998864 346799999999999999999999999 9999999999999999999999999998765422    2


Q ss_pred             CcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccc----------------cc
Q 018244          211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS----------------CL  273 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~----------------~~  273 (359)
                      ...+|+.|+|||++.+. .++.++||||||+++|+|++|..||..................+                ..
T Consensus       159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T 1ob3_A          159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF  238 (288)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred             cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccc
Confidence            34679999999999764 58999999999999999999999987653322211111100000                00


Q ss_pred             -------cCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          274 -------EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       274 -------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                             ........+.++.+|+.+||+.||++|||+.+++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  281 (288)
T 1ob3_A          239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (288)
T ss_dssp             CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                   001123356789999999999999999999999863

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.1e-47  Score=353.27  Aligned_cols=250  Identities=16%  Similarity=0.227  Sum_probs=205.1

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC---chHHHHHHHHHHHhcC-CCcccccccceeeeCCcce
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  129 (359)
                      ...+|.+++.||+|+||.||+|+.. +++.||+|++.....   ...+.+.+|..++..+ +||||+++++++.+....+
T Consensus         7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   86 (345)
T 3a8x_A            7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF   86 (345)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence            3467889999999999999999954 688999999986532   2345678899999988 8999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC-
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-  208 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~-  208 (359)
                      +||||+++|+|.+++..  ...+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.... 
T Consensus        87 lv~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~  163 (345)
T 3a8x_A           87 FVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP  163 (345)
T ss_dssp             EEECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred             EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence            99999999999999963  35699999999999999999999999 999999999999999999999999999986322 


Q ss_pred             ---CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHH-----HhhhhhhhhccccccCCCChH
Q 018244          209 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNIQTLTDSCLEGQFSSD  280 (359)
Q Consensus       209 ---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  280 (359)
                         .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......     ........+...  ...++..
T Consensus       164 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~  241 (345)
T 3a8x_A          164 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRS  241 (345)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--CCCCCTT
T ss_pred             CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--CCCCCCC
Confidence               234578999999999999899999999999999999999999986421100     000011111111  1234556


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCH------HHHHHH
Q 018244          281 EGTELVRLASRCLQYEPRERPNP------RSLVTA  309 (359)
Q Consensus       281 ~~~~l~~li~~cl~~dp~~Rps~------~~il~~  309 (359)
                      .+.++.+|+.+||+.||++||++      .+++++
T Consensus       242 ~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h  276 (345)
T 3a8x_A          242 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  276 (345)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred             CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence            77889999999999999999996      566543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=7.5e-48  Score=355.13  Aligned_cols=246  Identities=19%  Similarity=0.238  Sum_probs=208.0

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC---CchHHHHHHHHHHHhcC-CCcccccccceeeeCCcce
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  129 (359)
                      ...+|++++.||+|+||.||+|... +++.||||++....   ....+.+.+|..+|..+ +||||+++++++.+.+..+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            4567899999999999999999965 47899999997532   22356688899999988 7999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC-
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-  208 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~-  208 (359)
                      +||||+++|+|.+++..  ...+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++.... 
T Consensus        98 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  174 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD  174 (353)
T ss_dssp             EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence            99999999999999973  35699999999999999999999999 999999999999999999999999999986322 


Q ss_pred             ---CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          209 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       209 ---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                         .....||+.|+|||++.+..++.++||||||+++|||++|+.||...............      ...++...+.++
T Consensus       175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~  248 (353)
T 2i0e_A          175 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEA  248 (353)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHH
T ss_pred             CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHH
Confidence               23557899999999999999999999999999999999999999876544333322221      123455677899


Q ss_pred             HHHHHHhcccCCCCCCC-----HHHHHHH
Q 018244          286 VRLASRCLQYEPRERPN-----PRSLVTA  309 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps-----~~~il~~  309 (359)
                      .+|+.+||+.||++||+     +.+++++
T Consensus       249 ~~li~~lL~~dP~~R~~~~~~~~~~i~~h  277 (353)
T 2i0e_A          249 VAICKGLMTKHPGKRLGCGPEGERDIKEH  277 (353)
T ss_dssp             HHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred             HHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            99999999999999995     4677654

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.2e-47  Score=346.70  Aligned_cols=256  Identities=14%  Similarity=0.145  Sum_probs=207.2

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCC--cceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv~  132 (359)
                      ..|.+.+.||+|+||+||+|... ++..||||++..... ...+.+.+|+++++.++||||+++++++....  ..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            46888999999999999999954 588999999985432 33567889999999999999999999988765  679999


Q ss_pred             ecCCCCCHhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee----CCCCCeEEeccCCcccCC
Q 018244          133 EYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll----~~~~~~kl~DFg~a~~~~  207 (359)
                      ||+++++|.+++.... ...+++..++.++.|++.||.|||+. +++||||||+|||+    +.++.+||+|||+++...
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~  167 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE  167 (319)
T ss_dssp             ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred             eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence            9999999999997532 23499999999999999999999999 99999999999999    778889999999998765


Q ss_pred             CCC---CcCCCccccCccccc--------CCCCCCccchhhHHHHHHHHHhCCCCCCcchh----HHHhhhhhhhhc---
Q 018244          208 DGR---SYSTNLAFTPPEYLR--------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNIQTLT---  269 (359)
Q Consensus       208 ~~~---~~~~t~~y~aPE~~~--------~~~~~~~~Di~slG~il~elltg~~p~~~~~~----~~~~~~~~~~~~---  269 (359)
                      ...   ...||+.|+|||++.        +..++.++||||||+++|+|++|..||.....    ............   
T Consensus       168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~  247 (319)
T 4euu_A          168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA  247 (319)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTC
T ss_pred             CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCccc
Confidence            443   446899999999886        46789999999999999999999998853211    111111111000   


Q ss_pred             ----------------cccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          270 ----------------DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       270 ----------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                                      ............+..+.+++.+||+.||++|||+++++++....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             chhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence                            00011133467888999999999999999999999999987754

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=1.4e-47  Score=347.94  Aligned_cols=253  Identities=21%  Similarity=0.285  Sum_probs=212.2

Q ss_pred             CcccccccCCCCCCcEEEEEEe------CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      ..|.+.+.||+|+||.||+|..      .++..||+|.+..... ...+.+.+|+++++.++||||+++++++...+..+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  102 (314)
T 2ivs_A           23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLL  102 (314)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred             hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceE
Confidence            5688889999999999999985      2357899999986543 33567899999999999999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCC----------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCe
Q 018244          130 LVAEYMPNDTLAKHLFHWET----------------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI  187 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NI  187 (359)
                      +||||+++++|.+++.....                      ..+++..++.++.||+.||.|||++ +++|+||||+||
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~NI  181 (314)
T 2ivs_A          103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM-KLVHRDLAARNI  181 (314)
T ss_dssp             EEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGE
T ss_pred             EEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC-CCcccccchheE
Confidence            99999999999999975322                      3489999999999999999999999 999999999999


Q ss_pred             eeCCCCCeEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHH
Q 018244          188 VFDDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLI  260 (359)
Q Consensus       188 ll~~~~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~  260 (359)
                      +++.++.+||+|||++.......      ...+|+.|+|||.+.+..++.++||||||+++|+|++ |..||........
T Consensus       182 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  261 (314)
T 2ivs_A          182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL  261 (314)
T ss_dssp             EEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred             EEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            99999999999999998654332      3345778999999998889999999999999999999 8888876543322


Q ss_pred             hhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          261 RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      ....     ........+...+.++.+++.+||+.||++|||+.++++.|+.+..
T Consensus       262 ~~~~-----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  311 (314)
T 2ivs_A          262 FNLL-----KTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV  311 (314)
T ss_dssp             HHHH-----HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHh-----hcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            2111     1111223445667889999999999999999999999999998754

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=9.1e-48  Score=366.50  Aligned_cols=254  Identities=24%  Similarity=0.336  Sum_probs=210.5

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      ..|.+.+.||+|+||.||+|.+.++..||||.+.... ...+.+.+|+++|+.++||||+++++++.. +..+|||||++
T Consensus       184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~  261 (452)
T 1fmk_A          184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS  261 (452)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred             hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence            4577888999999999999998887889999998654 335679999999999999999999999876 67899999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----C
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S  211 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----~  211 (359)
                      +|+|.+++.......+++..+..++.||+.||+|||++ +++||||||+|||++.++.+||+|||+++......     .
T Consensus       262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~  340 (452)
T 1fmk_A          262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG  340 (452)
T ss_dssp             TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence            99999999643345689999999999999999999999 99999999999999999999999999998754322     2


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ..++..|+|||.+.+..++.++||||||+++|||++ |..||.............     .......+..++..+.+|+.
T Consensus       341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~-----~~~~~~~~~~~~~~l~~li~  415 (452)
T 1fmk_A          341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-----RGYRMPCPPECPESLHDLMC  415 (452)
T ss_dssp             --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-----TTCCCCCCTTSCHHHHHHHH
T ss_pred             CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----cCCCCCCCCCCCHHHHHHHH
Confidence            345678999999998899999999999999999999 888887654333222211     11222344567788999999


Q ss_pred             HhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          291 RCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      +||+.||++|||+.++++.|+.+.....
T Consensus       416 ~cl~~dP~~Rpt~~~l~~~L~~~~~~~~  443 (452)
T 1fmk_A          416 QCWRKEPEERPTFEYLQAFLEDYFTSTE  443 (452)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             HHccCChhhCcCHHHHHHHHHHHhccCC
Confidence            9999999999999999999998865443

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=4.8e-48  Score=353.34  Aligned_cols=260  Identities=21%  Similarity=0.271  Sum_probs=213.2

Q ss_pred             CcccccccCCCCCCcEEEEEEe-----CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceee--eCCcce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCC--EGDERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~  129 (359)
                      ..|++++.||+|+||.||+|..     .++..||||++........+.+.+|+++++.++||||+++++++.  .....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            4688999999999999999984     358899999998776566677999999999999999999999886  445689


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +||||+++++|.+++.. ....+++..++.++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++......
T Consensus       103 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~  180 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQR-HRARLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLD  180 (327)
T ss_dssp             EEEECCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred             EEEeecCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence            99999999999999964 234699999999999999999999999 9999999999999999999999999999865433


Q ss_pred             C-------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhh----------hhhhhhcccc
Q 018244          210 R-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD----------RNIQTLTDSC  272 (359)
Q Consensus       210 ~-------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~----------~~~~~~~~~~  272 (359)
                      .       ...+|..|+|||++.+..++.++||||||+++|+|++|..||..........          ..........
T Consensus       181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (327)
T 3lxl_A          181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG  260 (327)
T ss_dssp             CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTT
T ss_pred             CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcc
Confidence            2       3356778999999998889999999999999999999998876543322111          1111122222


Q ss_pred             ccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       273 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      .....+...++++.+|+.+||+.||++|||+.++++.|+.+.....
T Consensus       261 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~  306 (327)
T 3lxl_A          261 QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR  306 (327)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred             cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence            2333456677899999999999999999999999999999876443

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=1e-47  Score=354.64  Aligned_cols=248  Identities=19%  Similarity=0.186  Sum_probs=203.7

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC-----CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      .|++++.||+|+||+||+|.. .+++.||||++....     ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus        25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv  104 (351)
T 3c0i_A           25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMV  104 (351)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            588999999999999999985 468999999986421     12356789999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCC---eEEeccCCcccC
Q 018244          132 AEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLMKNS  206 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~---~kl~DFg~a~~~  206 (359)
                      |||+++++|.+++...  ....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.   +||+|||++...
T Consensus       105 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~  183 (351)
T 3c0i_A          105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL  183 (351)
T ss_dssp             EECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred             EeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence            9999999999887642  234689999999999999999999999 9999999999999986654   999999999876


Q ss_pred             CCCC----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHH
Q 018244          207 RDGR----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       207 ~~~~----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                      ....    ...||+.|+|||++.+..++.++||||||+++|+|++|..||......... .........  ........+
T Consensus       184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~i~~~~~~~--~~~~~~~~s  260 (351)
T 3c0i_A          184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFE-GIIKGKYKM--NPRQWSHIS  260 (351)
T ss_dssp             CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHH-HHHHTCCCC--CHHHHTTSC
T ss_pred             cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHH-HHHcCCCCC--CccccccCC
Confidence            5432    346899999999999889999999999999999999999998765432211 111100000  000012346


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .++.+|+.+||+.||++|||+.+++++
T Consensus       261 ~~~~~li~~~L~~dP~~R~s~~e~l~h  287 (351)
T 3c0i_A          261 ESAKDLVRRMLMLDPAERITVYEALNH  287 (351)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            789999999999999999999999874

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.9e-48  Score=355.54  Aligned_cols=245  Identities=19%  Similarity=0.229  Sum_probs=206.2

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .+..|.+++.||+|+||.||+|.. .++..||+|++....   ......+.+|+.+++.++||||+++++++......++
T Consensus         7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l   86 (336)
T 3h4j_B            7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM   86 (336)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            456789999999999999999995 678899999987432   1223568899999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-  209 (359)
                      ||||+ +|+|.+++..  ...+++..+..++.|++.||.|||+. |++||||||+|||+++++.+||+|||++...... 
T Consensus        87 v~E~~-~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~  162 (336)
T 3h4j_B           87 VIEYA-GGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRH-KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN  162 (336)
T ss_dssp             EECCC-CEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHH-TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred             EEECC-CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence            99999 6799998863  45699999999999999999999999 9999999999999999999999999999876543 


Q ss_pred             --CCcCCCccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          210 --RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       210 --~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                        ....||+.|+|||++.+..+ +.++||||||+++|+|++|..||............     .. .....+...++++.
T Consensus       163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i-----~~-~~~~~p~~~s~~~~  236 (336)
T 3h4j_B          163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV-----NS-CVYVMPDFLSPGAQ  236 (336)
T ss_dssp             TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCC-----CS-SCCCCCTTSCHHHH
T ss_pred             ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHH-----Hc-CCCCCcccCCHHHH
Confidence              34568999999999987775 68999999999999999999998764332221111     10 11223455678899


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHH
Q 018244          287 RLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +|+.+||+.||.+|||+.+++++
T Consensus       237 ~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          237 SLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHcCCChhHCcCHHHHHhC
Confidence            99999999999999999999875

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=1.4e-47  Score=349.52  Aligned_cols=258  Identities=19%  Similarity=0.279  Sum_probs=198.4

Q ss_pred             CcccccccCCCCCCcEEEEEEeCC-C---cEEEEEEeCCC--CCchHHHHHHHHHHHhcCCCcccccccceeeeCCcc--
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLEN-Q---FRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--  128 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~--  128 (359)
                      ..|.+.+.||+|+||+||+|.... +   ..||||++...  .....+.+.+|+++++.++||||+++++++......  
T Consensus        23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  102 (323)
T 3qup_A           23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR  102 (323)
T ss_dssp             --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred             hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence            467888899999999999998543 3   27999999765  334467799999999999999999999999877655  


Q ss_pred             ----eEEEecCCCCCHhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEecc
Q 018244          129 ----LLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF  200 (359)
Q Consensus       129 ----~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DF  200 (359)
                          ++||||+.+|+|.+++...    ....+++..++.++.|++.||.|||++ +++||||||+|||++.++.+||+||
T Consensus       103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivH~Dikp~NIli~~~~~~kl~Df  181 (323)
T 3qup_A          103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR-NFIHRDLAARNCMLAEDMTVCVADF  181 (323)
T ss_dssp             --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECCC
T ss_pred             CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC-CcccCCCCcceEEEcCCCCEEEeec
Confidence                9999999999999998642    122689999999999999999999999 9999999999999999999999999


Q ss_pred             CCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccc
Q 018244          201 GLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCL  273 (359)
Q Consensus       201 g~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~  273 (359)
                      |+++......      ...+++.|+|||.+.+..++.++||||||+++|+|++ |..||..............     ..
T Consensus       182 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~-----~~  256 (323)
T 3qup_A          182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG-----GN  256 (323)
T ss_dssp             CC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-----TC
T ss_pred             cccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhc-----CC
Confidence            9998654332      2345678999999998899999999999999999999 8887765433322221111     11


Q ss_pred             cCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccCC
Q 018244          274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVS  320 (359)
Q Consensus       274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~  320 (359)
                      ....+...+.++.+|+.+||+.||++|||+.++++.|+.+.......
T Consensus       257 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~  303 (323)
T 3qup_A          257 RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVL  303 (323)
T ss_dssp             CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC----
T ss_pred             CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhc
Confidence            22334556788999999999999999999999999999997765543

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=1.4e-47  Score=343.81  Aligned_cols=254  Identities=21%  Similarity=0.331  Sum_probs=216.4

Q ss_pred             CCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ..+|.+.+.||+|+||+||+|... ++..||+|.+.... ...+.+.+|+++++.++||||+++++++.+....++||||
T Consensus        12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   90 (288)
T 3kfa_A           12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   90 (288)
T ss_dssp             GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence            356788899999999999999965 48889999998654 3467789999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----  210 (359)
                      +.+++|.+++.......+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......    
T Consensus        91 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  169 (288)
T 3kfa_A           91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  169 (288)
T ss_dssp             CTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH-TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE
T ss_pred             CCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC-CccCCCCCcceEEEcCCCCEEEccCccceeccCCccccc
Confidence            9999999999876667799999999999999999999999 99999999999999999999999999998765433    


Q ss_pred             -CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       211 -~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                       ...+|+.|+|||.+.+..++.++||||||+++|+|++ |..||.............     .......+...++.+.+|
T Consensus       170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~l  244 (288)
T 3kfa_A          170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----KDYRMERPEGCPEKVYEL  244 (288)
T ss_dssp             TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-----TTCCCCCCTTCCHHHHHH
T ss_pred             cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-----ccCCCCCCCCCCHHHHHH
Confidence             2235678999999998899999999999999999999 888876554333222211     112223345667889999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          289 ASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      +.+||+.||++|||+.++++.|+.+...
T Consensus       245 i~~~l~~dp~~Rps~~~~~~~l~~~~~~  272 (288)
T 3kfa_A          245 MRACWQWNPSDRPSFAEIHQAFETMFQE  272 (288)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence            9999999999999999999999988664

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=2.3e-47  Score=348.92  Aligned_cols=245  Identities=17%  Similarity=0.209  Sum_probs=199.7

Q ss_pred             CCcccccccCCCCCCcEEEEEEe----CCCcEEEEEEeCCCCC----chHHHHHHHHHHHhcCCCcccccccceeeeCCc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW----PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE  127 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  127 (359)
                      ...|++++.||+|+||.||+|..    .+++.||+|++.....    .....+.+|+.+|+.++||||+++++++...+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            35788999999999999999986    4788999999986532    234557889999999999999999999999999


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      .++||||+++++|.+++..  ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus        96 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~  172 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQK-GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI  172 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred             EEEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhC-CEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence            9999999999999999963  45689999999999999999999999 99999999999999999999999999987543


Q ss_pred             CC----CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          208 DG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       208 ~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                      ..    ....||+.|+|||++.+..++.++||||||+++|+|++|..||...............      ....+...+.
T Consensus       173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~  246 (327)
T 3a62_A          173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC------KLNLPPYLTQ  246 (327)
T ss_dssp             ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT------CCCCCTTSCH
T ss_pred             cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCH
Confidence            22    3456899999999999888999999999999999999999998765443332222211      1123455678


Q ss_pred             HHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 018244          284 ELVRLASRCLQYEPRERP-----NPRSLVTA  309 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rp-----s~~~il~~  309 (359)
                      ++.+|+.+||+.||++||     ++.+++++
T Consensus       247 ~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h  277 (327)
T 3a62_A          247 EARDLLKKLLKRNAASRLGAGPGDAGEVQAH  277 (327)
T ss_dssp             HHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred             HHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence            899999999999999999     77787764

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=5.4e-48  Score=362.41  Aligned_cols=254  Identities=17%  Similarity=0.135  Sum_probs=209.8

Q ss_pred             HHHhcCCCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeC
Q 018244           50 RTATSGFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEG  125 (359)
Q Consensus        50 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~  125 (359)
                      ....-...+|.+++.||+|+||+||+|... ++..||+|++....   ....+.+.+|+.+++.++||||+++++++.+.
T Consensus        62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~  141 (410)
T 3v8s_A           62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  141 (410)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            334445678899999999999999999954 68899999986421   11233478899999999999999999999999


Q ss_pred             CcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCccc
Q 018244          126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (359)
Q Consensus       126 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~  205 (359)
                      ..++|||||+++|+|.+++..   ..+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus       142 ~~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~~g~ikL~DFG~a~~  217 (410)
T 3v8s_A          142 RYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCMK  217 (410)
T ss_dssp             SEEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeeECCCCCEEEeccceeEe
Confidence            999999999999999999853   4689999999999999999999999 999999999999999999999999999987


Q ss_pred             CCCC-----CCcCCCccccCcccccCCC----CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCC
Q 018244          206 SRDG-----RSYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ  276 (359)
Q Consensus       206 ~~~~-----~~~~~t~~y~aPE~~~~~~----~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  276 (359)
                      ....     ....||+.|+|||++.+..    ++.++||||||+++|||++|+.||..................  ....
T Consensus       218 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~p  295 (410)
T 3v8s_A          218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS--LTFP  295 (410)
T ss_dssp             CCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH--CCCC
T ss_pred             eccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccc--ccCC
Confidence            6543     2567999999999998655    789999999999999999999999876544333332221111  1111


Q ss_pred             CChHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 018244          277 FSSDEGTELVRLASRCLQYEPRE--RPNPRSLVTA  309 (359)
Q Consensus       277 ~~~~~~~~l~~li~~cl~~dp~~--Rps~~~il~~  309 (359)
                      .....+.++.+||.+||..+|.+  ||++++|+++
T Consensus       296 ~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          296 DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence            12346788999999999999988  9999999975

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.2e-47  Score=354.97  Aligned_cols=256  Identities=20%  Similarity=0.280  Sum_probs=209.6

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe------CCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcC-CCcccccccceeeeCC
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGD  126 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~  126 (359)
                      ....|.+.+.||+|+||.||+|.+      .+++.||||++...... ..+.+.+|++++..+ +||||+++++++...+
T Consensus        20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~   99 (359)
T 3vhe_A           20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   99 (359)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence            345678888999999999999973      24578999999865433 345789999999999 7999999999988765


Q ss_pred             c-ceEEEecCCCCCHhhhhhcCCC--------------------------------------------------------
Q 018244          127 E-RLLVAEYMPNDTLAKHLFHWET--------------------------------------------------------  149 (359)
Q Consensus       127 ~-~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------  149 (359)
                      . .++||||+++|+|.+++.....                                                        
T Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (359)
T 3vhe_A          100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE  179 (359)
T ss_dssp             SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred             CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence            4 8999999999999999975321                                                        


Q ss_pred             --------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC------CcCCC
Q 018244          150 --------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR------SYSTN  215 (359)
Q Consensus       150 --------~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~------~~~~t  215 (359)
                              ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++.......      ...+|
T Consensus       180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t  258 (359)
T 3vhe_A          180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP  258 (359)
T ss_dssp             ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEEC
T ss_pred             ccccchhccccCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCC
Confidence                    1289999999999999999999999 99999999999999999999999999998653322      34567


Q ss_pred             ccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcc
Q 018244          216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ  294 (359)
Q Consensus       216 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  294 (359)
                      +.|+|||++.+..++.++||||||+++|+|+| |..||..............    .......+...++++.+++.+||+
T Consensus       259 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~~l~  334 (359)
T 3vhe_A          259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK----EGTRMRAPDYTTPEMYQTMLDCWH  334 (359)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH----HTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             ceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHH----cCCCCCCCCCCCHHHHHHHHHHcc
Confidence            88999999998899999999999999999998 9988876432222111111    111223345567789999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 018244          295 YEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       295 ~dp~~Rps~~~il~~L~~~~~  315 (359)
                      .||++|||+.+++++|+.+..
T Consensus       335 ~dP~~Rps~~ell~~L~~~~~  355 (359)
T 3vhe_A          335 GEPSQRPTFSELVEHLGNLLQ  355 (359)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHH
T ss_pred             CChhhCCCHHHHHHHHHHHHH
Confidence            999999999999999998764

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=2.1e-47  Score=357.45  Aligned_cols=253  Identities=14%  Similarity=0.139  Sum_probs=204.2

Q ss_pred             CCcccccccCCCC--CCcEEEEEEeC-CCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           56 FAMENIVSEHGEK--APNVVYKGKLE-NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        56 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      ...|++++.||+|  +||+||+|... ++..||||++.....  ...+.+.+|+.+++.++||||+++++++...+..++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            4578999999999  99999999954 689999999976532  234568889999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC--
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--  208 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~--  208 (359)
                      ||||+++|+|.+++.......+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||.+.....  
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~  182 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG  182 (389)
T ss_dssp             EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred             EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence            99999999999999865557799999999999999999999999 999999999999999999999999998754321  


Q ss_pred             ---------CCCcCCCccccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccc------
Q 018244          209 ---------GRSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS------  271 (359)
Q Consensus       209 ---------~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~------  271 (359)
                               .....||+.|+|||++.+  ..++.++|||||||++|+|++|+.||...................      
T Consensus       183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  262 (389)
T 3gni_B          183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST  262 (389)
T ss_dssp             EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------------
T ss_pred             ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccc
Confidence                     123467889999999987  579999999999999999999999986542221111111000000      


Q ss_pred             ----------------------------------cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          272 ----------------------------------CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       272 ----------------------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                                        ......+...+.++.+|+.+||+.||++|||+.+++++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  334 (389)
T ss_dssp             -------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             cccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence                                              00001223456789999999999999999999999875

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=4.2e-47  Score=342.23  Aligned_cols=258  Identities=15%  Similarity=0.131  Sum_probs=210.0

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ..|.+.+.||+|+||.||+|.. .++..||||++....  ..+.+.+|+.+++.+ +|+|++++++++......++||||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~   87 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   87 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence            4688889999999999999994 678899999987543  234578899999999 799999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCC-----eEEeccCCcccCCCC
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN-----PRLSCFGLMKNSRDG  209 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~-----~kl~DFg~a~~~~~~  209 (359)
                      + +++|.+++.. ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.     +||+|||++......
T Consensus        88 ~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~  164 (298)
T 1csn_A           88 L-GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP  164 (298)
T ss_dssp             C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred             c-CCCHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence            9 8899999975 345699999999999999999999999 9999999999999987766     999999999865432


Q ss_pred             -----------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchh---HHHhhhhhhhhccccccC
Q 018244          210 -----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL---DLIRDRNIQTLTDSCLEG  275 (359)
Q Consensus       210 -----------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~---~~~~~~~~~~~~~~~~~~  275 (359)
                                 ....||+.|+|||.+.+..++.++||||||+++|+|++|+.||.....   .............. ...
T Consensus       165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~  243 (298)
T 1csn_A          165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST-PLR  243 (298)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS-CHH
T ss_pred             cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc-cHH
Confidence                       234688999999999988999999999999999999999999876321   11111110000000 000


Q ss_pred             CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccCC
Q 018244          276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVS  320 (359)
Q Consensus       276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~  320 (359)
                      ......+.++.+++.+||+.||++|||+.++++.|+.+.......
T Consensus       244 ~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~  288 (298)
T 1csn_A          244 ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTT  288 (298)
T ss_dssp             HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred             HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCC
Confidence            111245678999999999999999999999999999988765544

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=1.7e-47  Score=355.63  Aligned_cols=248  Identities=19%  Similarity=0.160  Sum_probs=201.5

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      .+...+.||+|+||.||+|.. .+|..||+|++........+.+.+|+++|+.++||||+++++++...+..+|||||++
T Consensus        90 ~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~  169 (373)
T 2x4f_A           90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD  169 (373)
T ss_dssp             EEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             eeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence            344456789999999999985 5688999999987665567789999999999999999999999999999999999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee--CCCCCeEEeccCCcccCCCCC---C
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF--DDDVNPRLSCFGLMKNSRDGR---S  211 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll--~~~~~~kl~DFg~a~~~~~~~---~  211 (359)
                      +++|.+++.. ....+++..+..++.||+.||.|||+. +|+||||||+|||+  +.++.+||+|||+++......   .
T Consensus       170 ~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~  247 (373)
T 2x4f_A          170 GGELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQM-YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV  247 (373)
T ss_dssp             TCEEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCC
T ss_pred             CCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccc
Confidence            9999998864 345689999999999999999999999 99999999999999  567889999999998765432   3


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ..||+.|+|||++.+..++.++||||||+++|+|++|..||..................  .........++++.+|+.+
T Consensus       248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~li~~  325 (373)
T 2x4f_A          248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD--LEDEEFQDISEEAKEFISK  325 (373)
T ss_dssp             CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--SCSGGGTTSCHHHHHHHHT
T ss_pred             ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC--CChhhhccCCHHHHHHHHH
Confidence            46899999999999888999999999999999999999998765433322222111110  0011113456789999999


Q ss_pred             hcccCCCCCCCHHHHHHH
Q 018244          292 CLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~  309 (359)
                      ||+.||++|||+.+++++
T Consensus       326 ~L~~dp~~Rps~~e~l~h  343 (373)
T 2x4f_A          326 LLIKEKSWRISASEALKH  343 (373)
T ss_dssp             TSCSSGGGSCCHHHHHHS
T ss_pred             HcCCChhhCCCHHHHhcC
Confidence            999999999999999974

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=2.6e-47  Score=340.57  Aligned_cols=253  Identities=23%  Similarity=0.335  Sum_probs=211.9

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      ..|++++.||+|+||.||+|...++..||+|.+.... ...+.+.+|+++++.++||||+++++++. .+..++||||++
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~   90 (279)
T 1qpc_A           13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYME   90 (279)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred             HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCC
Confidence            5788899999999999999998888899999997654 34567899999999999999999999986 456899999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----C
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S  211 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----~  211 (359)
                      +++|.+++.......+++..+..++.|++.||.|||++ +++|+||||+||++++++.+||+|||++.......     .
T Consensus        91 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  169 (279)
T 1qpc_A           91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG  169 (279)
T ss_dssp             TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred             CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence            99999999643233699999999999999999999999 99999999999999999999999999998765432     2


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ..++..|+|||.+.+..++.++||||||+++|+|++ |..||..............     ......+...+.++.+++.
T Consensus       170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~  244 (279)
T 1qpc_A          170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-----GYRMVRPDNCPEELYQLMR  244 (279)
T ss_dssp             CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTCCHHHHHHHH
T ss_pred             CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhc-----ccCCCCcccccHHHHHHHH
Confidence            345678999999998889999999999999999999 8888765443332221111     1122234556788999999


Q ss_pred             HhcccCCCCCCCHHHHHHHHHHhhhcc
Q 018244          291 RCLQYEPRERPNPRSLVTALVTLQKDT  317 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~L~~~~~~~  317 (359)
                      +||+.||++|||+.++++.|+.+....
T Consensus       245 ~~l~~~p~~Rps~~~l~~~l~~~~~~~  271 (279)
T 1qpc_A          245 LCWKERPEDRPTFDYLRSVLEDFFTAT  271 (279)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHhccChhhCCCHHHHHHHHHHHHHhc
Confidence            999999999999999999999986543

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=3.3e-47  Score=340.38  Aligned_cols=252  Identities=20%  Similarity=0.270  Sum_probs=199.9

Q ss_pred             CcccccccCCCCCCcEEEEEEeCC----CcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      ..|++.+.||+|+||.||+|....    +..||+|.+...... ..+.+.+|+.+++.++||||+++++++. .+..++|
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv   93 (281)
T 1mp8_A           15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII   93 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEE
Confidence            568889999999999999998532    457999998765433 3456899999999999999999999984 5678999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-  210 (359)
                      |||+++++|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||+++...... 
T Consensus        94 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  171 (281)
T 1mp8_A           94 MELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY  171 (281)
T ss_dssp             EECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred             EecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccccHHHEEECCCCCEEECccccccccCcccc
Confidence            999999999999965 345799999999999999999999999 99999999999999999999999999998764432 


Q ss_pred             ----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       211 ----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                          ...+|+.|+|||.+.+..++.++||||||+++|+|++ |..||.............     .......+...+.++
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~-----~~~~~~~~~~~~~~l  246 (281)
T 1mp8_A          172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-----NGERLPMPPNCPPTL  246 (281)
T ss_dssp             -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-----TTCCCCCCTTCCHHH
T ss_pred             cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHH-----cCCCCCCCCCCCHHH
Confidence                2345678999999998889999999999999999997 888876543322211111     111223445667889


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          286 VRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      .+++.+||+.||++|||+.++++.|+.+...
T Consensus       247 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  277 (281)
T 1mp8_A          247 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE  277 (281)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            9999999999999999999999999988653

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=7.6e-47  Score=345.87  Aligned_cols=256  Identities=15%  Similarity=0.113  Sum_probs=208.1

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ..|.+++.||+|+||+||+|.. .++..||||++.....  .+.+.+|+++++.+ +||||+++++++......++||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~   86 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL   86 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence            4678889999999999999994 6788999999875432  24578899999999 899999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCC-----eEEeccCCcccCCCC
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN-----PRLSCFGLMKNSRDG  209 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~-----~kl~DFg~a~~~~~~  209 (359)
                      + +++|.+++.. ....+++..+..++.|++.||.|||+. +++||||||+|||++.++.     +||+|||+++.....
T Consensus        87 ~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~  163 (330)
T 2izr_A           87 L-GPSLEDLFDL-CDRTFSLKTVLMIAIQLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP  163 (330)
T ss_dssp             C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred             C-CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence            9 8899999975 356799999999999999999999999 9999999999999998887     999999999865332


Q ss_pred             -----------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHh---hhhhhhhccccccC
Q 018244          210 -----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR---DRNIQTLTDSCLEG  275 (359)
Q Consensus       210 -----------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~  275 (359)
                                 ....||+.|+|||++.+..++.++||||||+++|+|++|..||.........   .......... ...
T Consensus       164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~-~~~  242 (330)
T 2izr_A          164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT-PIE  242 (330)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS-CHH
T ss_pred             CCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC-CHH
Confidence                       2456899999999999999999999999999999999999998763221111   1110000000 000


Q ss_pred             CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccC
Q 018244          276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV  319 (359)
Q Consensus       276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~  319 (359)
                      ......+ ++.+++..||+.||.+||++.++++.|+.+......
T Consensus       243 ~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~  285 (330)
T 2izr_A          243 VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGY  285 (330)
T ss_dssp             HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred             HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence            0011233 899999999999999999999999999988765543

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=4.5e-47  Score=340.93  Aligned_cols=253  Identities=20%  Similarity=0.307  Sum_probs=197.0

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ..|.+.+.||+|+||+||+|....  .||+|++......  ..+.+.+|+++++.++||||+++++++ .....++||||
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~  100 (289)
T 3og7_A           24 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQW  100 (289)
T ss_dssp             TSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred             cceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEe
Confidence            467888899999999999998644  4999999765432  346789999999999999999999965 55678999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-----
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----  209 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-----  209 (359)
                      +.+++|.+++.. ....+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++......     
T Consensus       101 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  178 (289)
T 3og7_A          101 CEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAK-SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ  178 (289)
T ss_dssp             CCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred             cCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CcccccCccceEEECCCCCEEEccceecccccccccccc
Confidence            999999999854 456799999999999999999999999 9999999999999999999999999998754421     


Q ss_pred             -CCcCCCccccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHH-hhhhhhhhccccccCCCChHHHHH
Q 018244          210 -RSYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI-RDRNIQTLTDSCLEGQFSSDEGTE  284 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~---~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  284 (359)
                       ....||+.|+|||.+.   +..++.++||||||+++|+|++|+.||........ ..........+ ........++.+
T Consensus       179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  257 (289)
T 3og7_A          179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSP-DLSKVRSNCPKR  257 (289)
T ss_dssp             -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCC-CTTSSCTTSCHH
T ss_pred             ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCc-chhhccccCCHH
Confidence             2346899999999987   56688899999999999999999999865432211 11111111111 111223456788


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          285 LVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       285 l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      +.+|+.+||+.||++|||+.++++.|+.+.+
T Consensus       258 l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          258 MKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            9999999999999999999999999998754

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=1.6e-47  Score=349.89  Aligned_cols=252  Identities=18%  Similarity=0.271  Sum_probs=204.2

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCc----EEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .+|++++.||+|+||+||+|.. .++.    .||+|.+.... ....+.+.+|+.+++.++||||+++++++... ..++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEE
Confidence            4688889999999999999985 3444    36888886443 23456789999999999999999999999875 4789


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      |+||+.+|+|.+++.. ....+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++......
T Consensus        94 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  171 (327)
T 3poz_A           94 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             EEECCTTCBHHHHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred             EEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence            9999999999999975 456799999999999999999999999 99999999999999999999999999998654332


Q ss_pred             ------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       211 ------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                            ...+|..|+|||++.+..++.++||||||+++|+|+| |..||..........     ..........+...+.
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  246 (327)
T 3poz_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-----ILEKGERLPQPPICTI  246 (327)
T ss_dssp             C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH-----HHHTTCCCCCCTTBCH
T ss_pred             ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHH-----HHHcCCCCCCCccCCH
Confidence                  2345778999999999999999999999999999999 898886544332221     1111222234456678


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      ++.+++.+||+.||++|||+.++++.|+.+...
T Consensus       247 ~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~  279 (327)
T 3poz_A          247 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             HHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence            899999999999999999999999999988653

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=3.3e-47  Score=346.53  Aligned_cols=256  Identities=22%  Similarity=0.298  Sum_probs=211.1

Q ss_pred             ccccccCCCCCCcEEEEEEe-----CCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeC--CcceE
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL  130 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l  130 (359)
                      |++++.||+|+||+||++..     .++..||||++...... ..+.+.+|+++++.++||||+++++++.+.  ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            48889999999999998864     25789999999875432 356689999999999999999999999874  56899


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      ||||+++|+|.+++..   ..+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++.......
T Consensus       113 v~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  188 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH  188 (318)
T ss_dssp             EECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred             EEecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence            9999999999999953   4599999999999999999999999 99999999999999999999999999998765432


Q ss_pred             -------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHH----------hhhhhhhhccccc
Q 018244          211 -------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI----------RDRNIQTLTDSCL  273 (359)
Q Consensus       211 -------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~----------~~~~~~~~~~~~~  273 (359)
                             ...+|..|+|||.+.+..++.++||||||+++|+|++|..|+........          .............
T Consensus       189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (318)
T 3lxp_A          189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE  268 (318)
T ss_dssp             SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred             cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhccc
Confidence                   33467789999999988899999999999999999999988765432211          1111222222223


Q ss_pred             cCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      ....+...+.++.+|+.+||+.||++|||+.++++.|+.+.+...
T Consensus       269 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~  313 (318)
T 3lxp_A          269 RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ  313 (318)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence            334456677899999999999999999999999999999876543

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.3e-46  Score=340.89  Aligned_cols=255  Identities=18%  Similarity=0.271  Sum_probs=202.7

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ++.+|++.+.||+|+||+||+|... +..||+|.+...  ...+.+.+|+++++.++||||+++++++.  +..++||||
T Consensus         6 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~   80 (307)
T 2eva_A            6 DYKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY   80 (307)
T ss_dssp             CGGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred             CHhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence            4567889999999999999999975 678999999753  34567899999999999999999999886  458999999


Q ss_pred             CCCCCHhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHhhc---CCCcccccCCCCCeeeCCCCC-eEEeccCCcccCCCC
Q 018244          135 MPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTS---KERALYHDLNAYRIVFDDDVN-PRLSCFGLMKNSRDG  209 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~---~~~ivH~Dikp~NIll~~~~~-~kl~DFg~a~~~~~~  209 (359)
                      +++|+|.+++..... ..+++..++.++.|++.||.|||+   + +++||||||+||+++.++. +||+|||++......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~-~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~  159 (307)
T 2eva_A           81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK-ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH  159 (307)
T ss_dssp             CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSS-CCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred             CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCC-CeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence            999999999974322 247899999999999999999999   6 9999999999999998887 799999998765432


Q ss_pred             -CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                       ....||+.|+|||++.+..++.++||||||+++|+|++|+.||...........  . ..............+..+.++
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~l~~l  236 (307)
T 2eva_A          160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--W-AVHNGTRPPLIKNLPKPIESL  236 (307)
T ss_dssp             -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHH--H-HHHTTCCCCCBTTCCHHHHHH
T ss_pred             cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHH--H-HHhcCCCCCcccccCHHHHHH
Confidence             345689999999999988999999999999999999999998864321111100  0 001111122334566789999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          289 ASRCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      +.+||+.||++|||+.++++.|+.+.+...
T Consensus       237 i~~~l~~dp~~Rps~~ell~~L~~~~~~~~  266 (307)
T 2eva_A          237 MTRCWSKDPSQRPSMEEIVKIMTHLMRYFP  266 (307)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred             HHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999876443

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=4.9e-47  Score=349.44  Aligned_cols=247  Identities=19%  Similarity=0.211  Sum_probs=207.0

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc---hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      .|.+++.||+|+||+||+|.. .++..||||++......   ..+.+.+|+++++.++||||+++++++...+..++|||
T Consensus        55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  134 (348)
T 1u5q_A           55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME  134 (348)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence            477888899999999999994 67889999999765332   23568899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCcC
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS  213 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~~  213 (359)
                      |+. |+|.+++.. ....+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++..........
T Consensus       135 ~~~-g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~  211 (348)
T 1u5q_A          135 YCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFV  211 (348)
T ss_dssp             CCS-EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCC
T ss_pred             cCC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCccc
Confidence            997 588888754 346799999999999999999999999 99999999999999999999999999999887777788


Q ss_pred             CCccccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          214 TNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       214 ~t~~y~aPE~~~---~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ||+.|+|||++.   +..++.++||||||+++|+|++|+.||..............    .......+...+..+.+|+.
T Consensus       212 gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~  287 (348)
T 1u5q_A          212 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ----NESPALQSGHWSEYFRNFVD  287 (348)
T ss_dssp             SCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH----SCCCCCCCTTSCHHHHHHHH
T ss_pred             CCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh----cCCCCCCCCCCCHHHHHHHH
Confidence            999999999985   46789999999999999999999998865433222111111    11111223456678999999


Q ss_pred             HhcccCCCCCCCHHHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~L~  311 (359)
                      +||+.||++|||+.+++++.-
T Consensus       288 ~~l~~dP~~Rps~~~ll~h~~  308 (348)
T 1u5q_A          288 SCLQKIPQDRPTSEVLLKHRF  308 (348)
T ss_dssp             HHTCSSGGGSCCHHHHTTCHH
T ss_pred             HHcccChhhCcCHHHHhhChh
Confidence            999999999999999997643

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=5.3e-47  Score=345.03  Aligned_cols=251  Identities=16%  Similarity=0.239  Sum_probs=190.9

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ..|++++.||+|+||+||+|.. .++..||+|.+..... ...+.+.+|+++++.++||||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   84 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF   84 (317)
T ss_dssp             --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred             cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence            4688899999999999999984 4688999999975432 2346788999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-
Q 018244          135 MPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       135 ~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-  209 (359)
                      ++ |+|.+++...    ....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++...... 
T Consensus        85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  162 (317)
T 2pmi_A           85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN-KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV  162 (317)
T ss_dssp             CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC
T ss_pred             cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCChHHeEEcCCCCEEECcCccceecCCCc
Confidence            98 5899988642    224689999999999999999999999 9999999999999999999999999999875432 


Q ss_pred             ---CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccc--------------
Q 018244          210 ---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS--------------  271 (359)
Q Consensus       210 ---~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~--------------  271 (359)
                         ....+|+.|+|||++.+. .++.++||||||+++|+|++|+.||..................+              
T Consensus       163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  242 (317)
T 2pmi_A          163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY  242 (317)
T ss_dssp             CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTC
T ss_pred             ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhc
Confidence               345679999999999864 58999999999999999999999987654332221111100000              


Q ss_pred             --c------------ccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          272 --C------------LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       272 --~------------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                        .            .........+.++.+|+.+||+.||++|||+.+++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  294 (317)
T 2pmi_A          243 NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH  294 (317)
T ss_dssp             CTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             ccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence              0            0000112346789999999999999999999999864

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=2e-47  Score=354.69  Aligned_cols=243  Identities=19%  Similarity=0.203  Sum_probs=197.7

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC---chHHHHHHHHHH-HhcCCCcccccccceeeeCCcce
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARA-VGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      ...+|++++.||+|+||.||+|+.. ++..||||++.....   .....+.+|..+ ++.++||||+++++++.+.+..|
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~  115 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY  115 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence            3467899999999999999999954 588999999976432   223456677776 57789999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC--
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--  207 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~--  207 (359)
                      +||||+++|+|.+++..  ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++...  
T Consensus       116 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~  192 (373)
T 2r5t_A          116 FVLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH  192 (373)
T ss_dssp             EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred             EEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence            99999999999999973  45689999999999999999999999 99999999999999999999999999998632  


Q ss_pred             --CCCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          208 --DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       208 --~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                        ......||+.|+|||++.+..++.++||||||+++|||++|..||...............      ...++...+.++
T Consensus       193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~  266 (373)
T 2r5t_A          193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------PLQLKPNITNSA  266 (373)
T ss_dssp             CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS------CCCCCSSSCHHH
T ss_pred             CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc------ccCCCCCCCHHH
Confidence              223567899999999999999999999999999999999999999776544433332221      112345567889


Q ss_pred             HHHHHHhcccCCCCCCCHHHH
Q 018244          286 VRLASRCLQYEPRERPNPRSL  306 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~~~i  306 (359)
                      .+|+.+||+.||.+||++.+.
T Consensus       267 ~~li~~lL~~dp~~R~~~~~~  287 (373)
T 2r5t_A          267 RHLLEGLLQKDRTKRLGAKDD  287 (373)
T ss_dssp             HHHHHHHTCSSGGGSTTTTTT
T ss_pred             HHHHHHHcccCHHhCCCCCCC
Confidence            999999999999999998543

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=1.5e-47  Score=364.66  Aligned_cols=245  Identities=20%  Similarity=0.244  Sum_probs=200.9

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCC---CCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      ..+|++++.||+|+||.||+|.. .++..||||++...   .......+.+|+.+++.++||||+++++++...+..+||
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            46788999999999999999994 56889999999753   223345678899999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-  209 (359)
                      |||+++|+|.+++..  ...+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|||+++..... 
T Consensus       227 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  303 (446)
T 4ejn_A          227 MEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG  303 (446)
T ss_dssp             ECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred             EeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcC-CEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence            999999999999863  4579999999999999999999998 7 9999999999999999999999999999864322 


Q ss_pred             ---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       210 ---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                         ....||+.|+|||++.+..++.++||||||+++|+|++|+.||...............      ...++...++++.
T Consensus       304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~  377 (446)
T 4ejn_A          304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLGPEAK  377 (446)
T ss_dssp             ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred             cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHH
Confidence               3457899999999999999999999999999999999999999776544333322221      1224456678899


Q ss_pred             HHHHHhcccCCCCCC-----CHHHHHHH
Q 018244          287 RLASRCLQYEPRERP-----NPRSLVTA  309 (359)
Q Consensus       287 ~li~~cl~~dp~~Rp-----s~~~il~~  309 (359)
                      +|+.+||+.||++||     |+.+++++
T Consensus       378 ~li~~~L~~dP~~R~~~~~~t~~ell~h  405 (446)
T 4ejn_A          378 SLLSGLLKKDPKQRLGGGSEDAKEIMQH  405 (446)
T ss_dssp             HHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             HHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence            999999999999999     99998864

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.5e-46  Score=337.16  Aligned_cols=256  Identities=21%  Similarity=0.277  Sum_probs=207.2

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCC---cEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcc-eEE
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQ---FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER-LLV  131 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-~lv  131 (359)
                      .|.+.+.||+|+||+||+|.. .++   ..+|+|.+..... ...+.+.+|+.+++.++||||+++++++...+.. ++|
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            344557889999999999984 332   3799999986543 2356789999999999999999999999876665 999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC---
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---  208 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~---  208 (359)
                      |||+.+|+|.+++.. ....+++..+..++.|++.||+|||++ +++|+||||+||+++.++.+||+|||++.....   
T Consensus       102 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  179 (298)
T 3pls_A          102 LPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQ-KFVHRDLAARNCMLDESFTVKVADFGLARDILDREY  179 (298)
T ss_dssp             ECCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred             EecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence            999999999999965 456789999999999999999999999 999999999999999999999999999975432   


Q ss_pred             -----CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          209 -----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       209 -----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                           .....++..|+|||.+.+..++.++||||||+++|+|++|..|+.........    ............+...+.
T Consensus       180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~  255 (298)
T 3pls_A          180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDL----THFLAQGRRLPQPEYCPD  255 (298)
T ss_dssp             GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGH----HHHHHTTCCCCCCTTCCH
T ss_pred             cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHH----HHHhhcCCCCCCCccchH
Confidence                 22345678999999999989999999999999999999977665433221111    111111112223455677


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccC
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV  319 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~  319 (359)
                      .+.+++.+||+.||++|||+.++++.|+.+......
T Consensus       256 ~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~  291 (298)
T 3pls_A          256 SLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG  291 (298)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence            899999999999999999999999999998775443

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=6.5e-47  Score=345.92  Aligned_cols=245  Identities=17%  Similarity=0.228  Sum_probs=196.5

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCC--------
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGD--------  126 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--------  126 (359)
                      .+|++++.||+|+||.||+|... ++..||||++..... ...+.+.+|+++|+.++||||+++++++.+..        
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   85 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM   85 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence            46888999999999999999965 789999999975443 34567899999999999999999999986543        


Q ss_pred             -------------------------------------------------cceEEEecCCCCCHhhhhhcCCC-CCCCHHH
Q 018244          127 -------------------------------------------------ERLLVAEYMPNDTLAKHLFHWET-QPMKWAM  156 (359)
Q Consensus       127 -------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~  156 (359)
                                                                       ..++||||+++++|.+++..... ...++..
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~  165 (332)
T 3qd2_B           86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV  165 (332)
T ss_dssp             HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred             hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence                                                             27999999999999999975322 3456778


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----------------CCcCCCccccC
Q 018244          157 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----------------RSYSTNLAFTP  220 (359)
Q Consensus       157 ~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----------------~~~~~t~~y~a  220 (359)
                      ++.++.||+.||+|||++ +++||||||+|||++.++.+||+|||+++.....                ....||+.|+|
T Consensus       166 ~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  244 (332)
T 3qd2_B          166 CLHIFIQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS  244 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred             HHHHHHHHHHHHHHHHhC-CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence            999999999999999999 9999999999999999999999999999876543                23458999999


Q ss_pred             cccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCC
Q 018244          221 PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER  300 (359)
Q Consensus       221 PE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R  300 (359)
                      ||++.+..++.++||||||+++|+|++|..|+....  ......    ... .........++++.+|+.+||+.||++|
T Consensus       245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~--~~~~~~----~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R  317 (332)
T 3qd2_B          245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV--RIITDV----RNL-KFPLLFTQKYPQEHMMVQDMLSPSPTER  317 (332)
T ss_dssp             HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH--HHHHHH----HTT-CCCHHHHHHCHHHHHHHHHHHCSSGGGS
T ss_pred             hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH--HHHHHh----hcc-CCCcccccCChhHHHHHHHHccCCCCcC
Confidence            999999899999999999999999999875432211  111000    000 0001113455778999999999999999


Q ss_pred             CCHHHHHHH
Q 018244          301 PNPRSLVTA  309 (359)
Q Consensus       301 ps~~~il~~  309 (359)
                      ||+.+++++
T Consensus       318 ps~~~~l~~  326 (332)
T 3qd2_B          318 PEATDIIEN  326 (332)
T ss_dssp             CCHHHHHHS
T ss_pred             CCHHHHhhc
Confidence            999999863

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=7.5e-47  Score=342.97  Aligned_cols=255  Identities=20%  Similarity=0.314  Sum_probs=212.5

Q ss_pred             CcccccccCCCCCCcEEEEEEe------CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcC-CCcccccccceeeeCCcc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDER  128 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~  128 (359)
                      ..|.+.+.||+|+||.||+|..      .++..||+|.+..... ...+.+.+|+.+++.+ +||||+++++++...+..
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~  102 (313)
T 1t46_A           23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT  102 (313)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence            4688889999999999999984      3467899999986543 2356789999999999 899999999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCCC----------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWET----------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD  192 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~  192 (359)
                      ++||||+++|+|.+++.....                ..+++..++.++.|++.||.|||++ +++|+||||+||+++.+
T Consensus       103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~  181 (313)
T 1t46_A          103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNILLTHG  181 (313)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEETT
T ss_pred             EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCccceEEEcCC
Confidence            999999999999999975432                2589999999999999999999999 99999999999999999


Q ss_pred             CCeEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhh
Q 018244          193 VNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI  265 (359)
Q Consensus       193 ~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~  265 (359)
                      +.+||+|||++.......      ...+|+.|+|||.+.+..++.++||||||+++|+|+| |..||.............
T Consensus       182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~  261 (313)
T 1t46_A          182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI  261 (313)
T ss_dssp             TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHH
T ss_pred             CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHh
Confidence            999999999998765443      2335678999999998899999999999999999999 888876543222111111


Q ss_pred             hhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                          ........+...+.++.+++.+||+.||++|||+.++++.|+.+...
T Consensus       262 ----~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  308 (313)
T 1t46_A          262 ----KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (313)
T ss_dssp             ----HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ----ccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence                11122223455678899999999999999999999999999988664

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=9.2e-47  Score=345.88  Aligned_cols=254  Identities=20%  Similarity=0.299  Sum_probs=211.8

Q ss_pred             CcccccccCCCCCCcEEEEEEeC--------CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcC-CCcccccccceeeeCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGD  126 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~  126 (359)
                      ..|.+.+.||+|+||.||+|...        ++..||+|++..... ...+.+.+|+++++.+ +||||+++++++...+
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  114 (334)
T 2pvf_A           35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG  114 (334)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC
Confidence            57888999999999999999852        467899999986543 2356788999999999 8999999999999999


Q ss_pred             cceEEEecCCCCCHhhhhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC
Q 018244          127 ERLLVAEYMPNDTLAKHLFHWET--------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD  192 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~  192 (359)
                      ..++||||+++|+|.+++.....              ..+++..++.++.||+.||.|||++ +++|+||||+||+++.+
T Consensus       115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~  193 (334)
T 2pvf_A          115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTEN  193 (334)
T ss_dssp             CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTT
T ss_pred             ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCccceEEEcCC
Confidence            99999999999999999975321              2489999999999999999999999 99999999999999999


Q ss_pred             CCeEEeccCCcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhh
Q 018244          193 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI  265 (359)
Q Consensus       193 ~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~  265 (359)
                      +.+||+|||++......      ....+|+.|+|||++.+..++.++||||||+++|+|++ |..||.............
T Consensus       194 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~  273 (334)
T 2pvf_A          194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK  273 (334)
T ss_dssp             CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred             CCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHh
Confidence            99999999999865543      23345778999999988889999999999999999999 888887654433322211


Q ss_pred             hhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      .     ......+...+.++.+++.+||+.||++|||+.++++.|+.+...
T Consensus       274 ~-----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~  319 (334)
T 2pvf_A          274 E-----GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL  319 (334)
T ss_dssp             H-----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             c-----CCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            1     112233455677899999999999999999999999999998654

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=3.2e-47  Score=343.80  Aligned_cols=255  Identities=18%  Similarity=0.298  Sum_probs=206.8

Q ss_pred             cccccccCCCCCCcEEEEEEe-----CCCcEEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeeeC--Ccce
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL  129 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~  129 (359)
                      .|++++.||+|+||.||+|.+     .++..||+|++.... ....+.+.+|+++++.++||||+++++++...  ...+
T Consensus        22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  101 (302)
T 4e5w_A           22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK  101 (302)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred             hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence            478889999999999999983     368899999998543 23356789999999999999999999999876  6689


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +||||+++|+|.+++.. ....+++..++.++.|++.||+|||++ +++|+||||+||+++.++.+||+|||++......
T Consensus       102 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  179 (302)
T 4e5w_A          102 LIMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD  179 (302)
T ss_dssp             EEEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred             EEEEeCCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCchheEEEcCCCCEEECcccccccccCC
Confidence            99999999999999954 345699999999999999999999999 9999999999999999999999999999876543


Q ss_pred             C-------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHH----------hhhhhhhhcccc
Q 018244          210 R-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI----------RDRNIQTLTDSC  272 (359)
Q Consensus       210 ~-------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~----------~~~~~~~~~~~~  272 (359)
                      .       ...+|..|+|||.+.+..++.++||||||+++|+|++|..|+........          ............
T Consensus       180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (302)
T 4e5w_A          180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG  259 (302)
T ss_dssp             CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTT
T ss_pred             CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhcc
Confidence            2       34567789999999988899999999999999999999976533211110          001111111222


Q ss_pred             ccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 018244          273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ  314 (359)
Q Consensus       273 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~  314 (359)
                      .....+...++++.+|+.+||+.||++|||+.++++.|+.+.
T Consensus       260 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          260 KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            223345567789999999999999999999999999998864

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=4.8e-47  Score=349.78  Aligned_cols=246  Identities=20%  Similarity=0.225  Sum_probs=190.8

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      .|.+.+.||+|+||.||+|... ++..||||++....  ..+.+.+|+++++.++||||+++++++......++||||++
T Consensus        54 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  131 (349)
T 2w4o_A           54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT  131 (349)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             cEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence            4788889999999999999965 57899999998643  34567889999999999999999999999999999999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC---CCCeEEeccCCcccCCCC---C
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDG---R  210 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~---~~~~kl~DFg~a~~~~~~---~  210 (359)
                      +|+|.+++.  ....+++..+..++.|++.||.|||+. +++||||||+|||++.   ++.+||+|||+++.....   .
T Consensus       132 ~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~  208 (349)
T 2w4o_A          132 GGELFDRIV--EKGYYSERDAADAVKQILEAVAYLHEN-GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK  208 (349)
T ss_dssp             SCBHHHHHT--TCSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred             CCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccc
Confidence            999999986  445689999999999999999999999 9999999999999975   889999999999865543   3


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ...||+.|+|||++.+..++.++||||||+++|+|++|..||................. ...........+.++.+|+.
T Consensus       209 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~li~  287 (349)
T 2w4o_A          209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE-YYFISPWWDEVSLNAKDLVR  287 (349)
T ss_dssp             ----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTC-CCCCTTTTTTSCHHHHHHHH
T ss_pred             cccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCC-CccCCchhhhCCHHHHHHHH
Confidence            45689999999999988999999999999999999999999876543321111111000 00111222456778999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~  309 (359)
                      +||+.||++|||+.+++++
T Consensus       288 ~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          288 KLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             TTSCSSGGGSCCHHHHHHS
T ss_pred             HHccCChhhCcCHHHHhcC
Confidence            9999999999999999874

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=5.3e-47  Score=343.74  Aligned_cols=264  Identities=17%  Similarity=0.201  Sum_probs=205.0

Q ss_pred             cCCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        54 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      ..+..|++.+.||+|+||.||+|.. .++..||+|++....   ......+.+|+.+++.++||||+++++++...+..+
T Consensus        29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~  108 (310)
T 2wqm_A           29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELN  108 (310)
T ss_dssp             SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEE
Confidence            3456789999999999999999995 578899999997533   223556889999999999999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          130 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      +||||+++++|.+++...  ....+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++....
T Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             EEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            999999999999998642  356789999999999999999999999 99999999999999999999999999987654


Q ss_pred             CC----CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          208 DG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       208 ~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                      ..    ....+++.|+|||.+.+..++.++||||||+++|+|++|..||..........  ...+.............+.
T Consensus       188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  265 (310)
T 2wqm_A          188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--CKKIEQCDYPPLPSDHYSE  265 (310)
T ss_dssp             -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHH--HHHHHTTCSCCCCTTTSCH
T ss_pred             CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHH--HHHhhcccCCCCcccccCH
Confidence            33    23467899999999998899999999999999999999999886543221110  0011111111112244667


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccCC
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVS  320 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~  320 (359)
                      ++.+|+.+||+.||++|||+.++++.|+++......+
T Consensus       266 ~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~  302 (310)
T 2wqm_A          266 ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS  302 (310)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence            8999999999999999999999999999997765544

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.5e-47  Score=350.88  Aligned_cols=256  Identities=21%  Similarity=0.269  Sum_probs=208.4

Q ss_pred             CCcccccccCCCCCCcEEEEEEe------CCCcEEEEEEeCCCC-CchHHHHHHHHHHHhcC-CCcccccccceeeeCCc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDE  127 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~  127 (359)
                      ...|.+.+.||+|+||.||+|..      .++..||+|.+.... ....+.+.+|+.++..+ +||||+++++++...+.
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  123 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  123 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence            35788889999999999999985      245689999998543 23356789999999999 89999999999999999


Q ss_pred             ceEEEecCCCCCHhhhhhcCCC---------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWET---------------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR  186 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~N  186 (359)
                      .++||||+++|+|.+++.....                     ..+++..++.++.||+.||.|||++ +++||||||+|
T Consensus       124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~N  202 (344)
T 1rjb_A          124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK-SCVHRDLAARN  202 (344)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT-TEEETTCSGGG
T ss_pred             cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChhh
Confidence            9999999999999999975322                     2479999999999999999999999 99999999999


Q ss_pred             eeeCCCCCeEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHH
Q 018244          187 IVFDDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDL  259 (359)
Q Consensus       187 Ill~~~~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~  259 (359)
                      |+++.++.+||+|||++.......      ...+|+.|+|||.+.+..++.++||||||+++|+|+| |..||.......
T Consensus       203 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  282 (344)
T 1rjb_A          203 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA  282 (344)
T ss_dssp             EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred             EEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH
Confidence            999999999999999998654332      2345678999999998899999999999999999998 888886653222


Q ss_pred             HhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          260 IRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      .....    .........+...+.++.+|+.+||+.||++|||+.++++.|+.+...
T Consensus       283 ~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  335 (344)
T 1rjb_A          283 NFYKL----IQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD  335 (344)
T ss_dssp             HHHHH----HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             HHHHH----HhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            11111    111122233455678899999999999999999999999999987654

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.1e-46  Score=341.81  Aligned_cols=259  Identities=16%  Similarity=0.188  Sum_probs=204.9

Q ss_pred             HhcCCCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCch---HHHHHHHHHHHhcCCCcccccccceeeeCCc
Q 018244           52 ATSGFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDE  127 (359)
Q Consensus        52 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  127 (359)
                      ....+..|.+++.||+|+||.||+|... ++..||+|++.......   .+.+.+|+.+++.++||||+++++++...+.
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~  108 (309)
T 2h34_A           29 EGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQ  108 (309)
T ss_dssp             -----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE
T ss_pred             CCcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCe
Confidence            3445788999999999999999999954 68899999997653222   3668899999999999999999999999999


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      .++||||+++++|.+++..  ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++....
T Consensus       109 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  185 (309)
T 2h34_A          109 LYVDMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAA-GATHRDVKPENILVSADDFAYLVDFGIASATT  185 (309)
T ss_dssp             EEEEEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred             EEEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence            9999999999999999973  35699999999999999999999999 99999999999999999999999999987654


Q ss_pred             CC-----CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHH
Q 018244          208 DG-----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       208 ~~-----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                      ..     ....+|+.|+|||.+.+..++.++||||||+++|+|++|..||..................   ....+...+
T Consensus       186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~  262 (309)
T 2h34_A          186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPR---PSTVRPGIP  262 (309)
T ss_dssp             -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCC---GGGTSTTCC
T ss_pred             ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCC---ccccCCCCC
Confidence            33     2346789999999999888999999999999999999999998876544332221111111   112234556


Q ss_pred             HHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhhhc
Q 018244          283 TELVRLASRCLQYEPRERP-NPRSLVTALVTLQKD  316 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rp-s~~~il~~L~~~~~~  316 (359)
                      .++.+++.+||+.||++|| |++++++.|+.....
T Consensus       263 ~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~  297 (309)
T 2h34_A          263 VAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT  297 (309)
T ss_dssp             THHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred             HHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence            7899999999999999999 999999999987553

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=2e-47  Score=349.04  Aligned_cols=252  Identities=17%  Similarity=0.256  Sum_probs=205.6

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcE----EEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFR----IAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .+|++++.||+|+||+||+|.. .++..    ||+|.+.... ......+.+|+.+++.++||||+++++++. ....++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            5688999999999999999985 34443    8888876443 222345778999999999999999999886 567899


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      ||||+.+|+|.+++.. ....+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||+++......
T Consensus        92 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  169 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIAKGMYYLEEH-GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD  169 (325)
T ss_dssp             EEECCTTCBSHHHHHS-SGGGSCTTHHHHHHHHHHHHHHHHHHT-TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred             EEEeCCCCCHHHHHHH-ccccCCHHHHHHHHHHHHHHHHHHHhC-CCCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence            9999999999999964 345789999999999999999999999 99999999999999999999999999998764332


Q ss_pred             ------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       211 ------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                            ...+|..|+|||++.+..++.++||||||+++|+|+| |..||.............     .......+...+.
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~  244 (325)
T 3kex_A          170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE-----KGERLAQPQICTI  244 (325)
T ss_dssp             TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHH-----TTCBCCCCTTBCT
T ss_pred             ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHH-----cCCCCCCCCcCcH
Confidence                  3346779999999998899999999999999999999 998887654333222111     1112223344566


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      ++.+++.+||+.||++|||+.++++.|+.+...
T Consensus       245 ~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~  277 (325)
T 3kex_A          245 DVYMVMVKCWMIDENIRPTFKELANEFTRMARD  277 (325)
T ss_dssp             TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            799999999999999999999999999998653

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=8.8e-47  Score=360.30  Aligned_cols=244  Identities=19%  Similarity=0.270  Sum_probs=208.5

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ..|.+.+.||+|+||.||+|... +|+.||||++....   ......+.+|+.+++.++||||+++++++...+..++||
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            56889999999999999999954 78999999997532   123457889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---  209 (359)
                      ||+++|+|.+++.  ....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++......   
T Consensus        96 E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~  172 (476)
T 2y94_A           96 EYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL  172 (476)
T ss_dssp             ECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCB
T ss_pred             eCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcccccHHHEEEecCCCeEEEeccchhhccccccc
Confidence            9999999999996  456799999999999999999999999 9999999999999999999999999999876543   


Q ss_pred             CCcCCCccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          210 RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                      ....||+.|+|||++.+..+ +.++||||||+++|+|++|..||................      ...+...+.++.+|
T Consensus       173 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~------~~~p~~~s~~~~~L  246 (476)
T 2y94_A          173 RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI------FYTPQYLNPSVISL  246 (476)
T ss_dssp             CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTC------CCCCTTCCHHHHHH
T ss_pred             cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC------cCCCccCCHHHHHH
Confidence            34568999999999998775 679999999999999999999987664433332222111      12234566789999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+||+.||++|||+.+++++
T Consensus       247 i~~~L~~dP~~Rpt~~eil~h  267 (476)
T 2y94_A          247 LKHMLQVDPMKRATIKDIREH  267 (476)
T ss_dssp             HHHHTCSSTTTSCCHHHHHTC
T ss_pred             HHHHcCCCchhCcCHHHHHhC
Confidence            999999999999999999974

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=3.5e-47  Score=352.80  Aligned_cols=259  Identities=15%  Similarity=0.166  Sum_probs=206.5

Q ss_pred             CcccccccCCCCCCcEEEEEEeCC------CcEEEEEEeCCCCCchH-----------HHHHHHHHHHhcCCCccccccc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWPDA-----------RQFLEEARAVGQLRNRRLANLL  119 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~-----------~~~~~e~~~l~~l~h~niv~~~  119 (359)
                      ..|.+.+.||+|+||+||+|....      +..||||++........           ..+.+|+..+..++|+||++++
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~  114 (364)
T 3op5_A           35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW  114 (364)
T ss_dssp             CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred             CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence            478899999999999999998654      47899999876542211           1234566778888999999999


Q ss_pred             ceeeeC----CcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC--CCC
Q 018244          120 GCCCEG----DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDV  193 (359)
Q Consensus       120 ~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~--~~~  193 (359)
                      +++...    ...+|||||+ +++|.+++.. ....+++..+..++.||+.||.|||++ +|+||||||+|||++  .++
T Consensus       115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp~Nill~~~~~~  191 (364)
T 3op5_A          115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEH-EYVHGDIKASNLLLNYKNPD  191 (364)
T ss_dssp             EEEEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEESSCTT
T ss_pred             eeeeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeEEecCCHHHEEEecCCCC
Confidence            998775    4589999999 9999999975 446799999999999999999999999 999999999999999  889


Q ss_pred             CeEEeccCCcccCCCC-----------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhh
Q 018244          194 NPRLSCFGLMKNSRDG-----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD  262 (359)
Q Consensus       194 ~~kl~DFg~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~  262 (359)
                      .+||+|||+++.....           ....||+.|+|||++.+..++.++||||||+++|+|+||+.||.....+....
T Consensus       192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~  271 (364)
T 3op5_A          192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV  271 (364)
T ss_dssp             CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred             eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHH
Confidence            9999999999764322           23348999999999999899999999999999999999999987532211110


Q ss_pred             --------hhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccCCc
Q 018244          263 --------RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVSC  321 (359)
Q Consensus       263 --------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~~  321 (359)
                              .....+.+.++.   ....+.++.+++..||+.||++|||+.++++.|+.+........
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~  335 (364)
T 3op5_A          272 RDSKIRYRENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKD  335 (364)
T ss_dssp             HHHHHHHHHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHhhhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCc
Confidence                    111122222221   13346789999999999999999999999999999887655543

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=2.2e-47  Score=360.86  Aligned_cols=253  Identities=17%  Similarity=0.125  Sum_probs=207.7

Q ss_pred             cCCCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           54 SGFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        54 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      -...+|++++.||+|+||+||+|+.. +++.||+|++.....   .....+.+|+.++..++||||++++++|.+.+.++
T Consensus        71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~  150 (437)
T 4aw2_A           71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLY  150 (437)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred             CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEE
Confidence            34567888999999999999999965 578999999974221   11233788999999999999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      |||||+++|+|.+++.. ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus       151 lV~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~-giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~  228 (437)
T 4aw2_A          151 LVMDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQL-HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED  228 (437)
T ss_dssp             EEECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             EEEecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecccCHHHeeEcCCCCEEEcchhhhhhcccC
Confidence            99999999999999964 356799999999999999999999999 9999999999999999999999999999765443


Q ss_pred             C-----CcCCCccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCCh
Q 018244          210 R-----SYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS  279 (359)
Q Consensus       210 ~-----~~~~t~~y~aPE~~~-----~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (359)
                      .     ...||+.|+|||++.     ...++.++|||||||++|||++|+.||.................... .+....
T Consensus       229 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~-~p~~~~  307 (437)
T 4aw2_A          229 GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ-FPTQVT  307 (437)
T ss_dssp             SCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC-CCSSCC
T ss_pred             CCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccccc-CCcccc
Confidence            2     357899999999987     45689999999999999999999999987654433332222111111 111123


Q ss_pred             HHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 018244          280 DEGTELVRLASRCLQYEPRE--RPNPRSLVTA  309 (359)
Q Consensus       280 ~~~~~l~~li~~cl~~dp~~--Rps~~~il~~  309 (359)
                      ..++++.+||.+||..+|++  ||++++++++
T Consensus       308 ~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          308 DVSENAKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             cCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence            46788999999999988888  9999999875

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=3.2e-47  Score=339.91  Aligned_cols=253  Identities=25%  Similarity=0.343  Sum_probs=204.6

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeC-CcceEEEe
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG-DERLLVAE  133 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e  133 (359)
                      +...|++++.||+|+||+||+|... +..||||.+....  ..+.+.+|+++++.++||||+++++++... +..++|||
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e   95 (278)
T 1byg_A           19 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   95 (278)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred             ChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence            3567899999999999999999874 7789999997543  456789999999999999999999987554 47899999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-CCc
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY  212 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-~~~  212 (359)
                      |+++++|.+++.......+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++...... ...
T Consensus        96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~  174 (278)
T 1byg_A           96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG  174 (278)
T ss_dssp             CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred             cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCcceEEEeCCCcEEEeeccccccccccccCC
Confidence            99999999999753333489999999999999999999999 9999999999999999999999999998765443 234


Q ss_pred             CCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       213 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      .++..|+|||.+.+..++.++||||||+++|+|++ |..||.............     .......+...++.+.+++.+
T Consensus       175 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~li~~  249 (278)
T 1byg_A          175 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-----KGYKMDAPDGCPPAVYEVMKN  249 (278)
T ss_dssp             -CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT-----TTCCCCCCTTCCHHHHHHHHH
T ss_pred             CccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-----cCCCCCCcccCCHHHHHHHHH
Confidence            56789999999998889999999999999999998 888876554332222111     111223345667889999999


Q ss_pred             hcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          292 CLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      ||+.||++|||+.++++.|+.+...
T Consensus       250 ~l~~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          250 CWHLDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HhcCChhhCCCHHHHHHHHHHHHhh
Confidence            9999999999999999999998654

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=1.7e-46  Score=340.19  Aligned_cols=251  Identities=15%  Similarity=0.150  Sum_probs=200.9

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC-----chHHHHHHHHHHHhcCC---CcccccccceeeeCC-
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-----PDARQFLEEARAVGQLR---NRRLANLLGCCCEGD-  126 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~-  126 (359)
                      ..|++++.||+|+||+||+|.. .+++.||||++.....     .....+.+|+.+++.++   ||||+++++++.... 
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~   88 (308)
T 3g33_A            9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT   88 (308)
T ss_dssp             -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence            4688899999999999999994 5788999999874321     11345677887777764   999999999998765 


Q ss_pred             ----cceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCC
Q 018244          127 ----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (359)
Q Consensus       127 ----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~  202 (359)
                          ..++||||+. ++|.+++.......+++..+..++.|++.||+|||++ +++||||||+|||++.++.+||+|||+
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  166 (308)
T 3g33_A           89 DREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTSGGTVKLADFGL  166 (308)
T ss_dssp             SSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred             CCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence                4799999997 5999999765555699999999999999999999999 999999999999999999999999999


Q ss_pred             cccCCCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccc-------
Q 018244          203 MKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC-------  272 (359)
Q Consensus       203 a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------  272 (359)
                      ++.....   ....+|+.|+|||++.+..++.++||||||+++|+|++|+.||..................+.       
T Consensus       167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  246 (308)
T 3g33_A          167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD  246 (308)
T ss_dssp             TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSS
T ss_pred             ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccch
Confidence            9866543   235679999999999989999999999999999999999999876544333222211110000       


Q ss_pred             -------ccC-------CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          273 -------LEG-------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       273 -------~~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                             ...       ......+.++.+|+.+||+.||++|||+.+++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  297 (308)
T 3g33_A          247 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH  297 (308)
T ss_dssp             CSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence                   000       0012356789999999999999999999999864

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=7.2e-47  Score=337.79  Aligned_cols=246  Identities=21%  Similarity=0.294  Sum_probs=206.3

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .+.+|.+++.||+|+||+||+|.. .++..||+|++.....   .....+.+|+.+++.++||||+++++++.+....++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL   86 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence            356788999999999999999985 4577999999865321   124568899999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-  209 (359)
                      ||||+++++|.+++..  ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++...... 
T Consensus        87 v~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~-~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~  163 (279)
T 3fdn_A           87 ILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR  163 (279)
T ss_dssp             EECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTT-TCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred             EEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence            9999999999999863  35689999999999999999999999 9999999999999999999999999998665433 


Q ss_pred             -CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                       ....+|+.|+|||.+.+..++.++||||||+++|+|++|..||..............      .....+...+.++.+|
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l  237 (279)
T 3fdn_A          164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------VEFTFPDFVTEGARDL  237 (279)
T ss_dssp             ----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH------TCCCCCTTSCHHHHHH
T ss_pred             ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh------CCCCCCCcCCHHHHHH
Confidence             345689999999999988899999999999999999999999876654433222211      1122345567789999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+||+.||++|||+.+++++
T Consensus       238 i~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          238 ISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             HHHHCCSSGGGSCCHHHHHHC
T ss_pred             HHHHhccChhhCCCHHHHhhC
Confidence            999999999999999999986

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-46  Score=337.67  Aligned_cols=257  Identities=19%  Similarity=0.250  Sum_probs=213.4

Q ss_pred             Ccccccc-cCCCCCCcEEEEEEeC---CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           57 AMENIVS-EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        57 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      ..|.+++ .||+|+||.||+|...   ++..||+|++..... ...+.+.+|+++++.++||||+++++++ ..+..++|
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv   87 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV   87 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence            4566776 7999999999999853   577899999987543 3456789999999999999999999999 55679999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-  210 (359)
                      |||+++++|.+++.. ....+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++....... 
T Consensus        88 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~  165 (287)
T 1u59_A           88 MEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS  165 (287)
T ss_dssp             EECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred             EEeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence            999999999999864 455699999999999999999999999 99999999999999999999999999998764332 


Q ss_pred             ------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       211 ------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                            ...+|+.|+|||++.+..++.++||||||+++|+|++ |..||.............     .......+...+.
T Consensus       166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~-----~~~~~~~~~~~~~  240 (287)
T 1u59_A          166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-----QGKRMECPPECPP  240 (287)
T ss_dssp             EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH-----TTCCCCCCTTCCH
T ss_pred             eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHh-----cCCcCCCCCCcCH
Confidence                  2345788999999988889999999999999999998 998886654332222111     1122334556778


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccCCc
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVSC  321 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~~  321 (359)
                      ++.+++.+||+.||++|||+.++++.|+.+........
T Consensus       241 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~  278 (287)
T 1u59_A          241 ELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV  278 (287)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcc
Confidence            99999999999999999999999999999977655543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=2.1e-46  Score=337.86  Aligned_cols=256  Identities=23%  Similarity=0.290  Sum_probs=205.9

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCC----CcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceee-eCCcce
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCC-EGDERL  129 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~  129 (359)
                      ...|++.+.||+|+||+||+|...+    ...+|+|.+..... ...+.+.+|+.+++.++||||+++++++. ..+..+
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  103 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL  103 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence            3568888999999999999998532    33689999986443 33567899999999999999999999854 456789


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +||||+++|+|.+++.. ....+++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+|||++......
T Consensus       104 ~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  181 (298)
T 3f66_A          104 VVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK  181 (298)
T ss_dssp             EEEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred             EEEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCchheEEECCCCCEEECccccccccccc
Confidence            99999999999999964 456789999999999999999999999 9999999999999999999999999999865432


Q ss_pred             --------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCC-cchhHHHhhhhhhhhccccccCCCChH
Q 018244          210 --------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP-SHALDLIRDRNIQTLTDSCLEGQFSSD  280 (359)
Q Consensus       210 --------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (359)
                              ....+|+.|+|||.+.+..++.++||||||+++|+|++|..|+. .............     ......+..
T Consensus       182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  256 (298)
T 3f66_A          182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-----GRRLLQPEY  256 (298)
T ss_dssp             GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHT-----TCCCCCCTT
T ss_pred             chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhc-----CCCCCCCcc
Confidence                    23345778999999998899999999999999999999655443 3221111111111     111222344


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          281 EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      .+..+.+++.+||+.||++|||+.++++.|+.+.....
T Consensus       257 ~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  294 (298)
T 3f66_A          257 CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  294 (298)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence            56789999999999999999999999999999876543

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=7.8e-47  Score=345.23  Aligned_cols=258  Identities=19%  Similarity=0.295  Sum_probs=212.0

Q ss_pred             CcccccccCCCCCCcEEEEEEe-----CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCC--cce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~  129 (359)
                      ..|++++.||+|+||.||+|..     .++..||||++........+.+.+|+++++.++||||+++++++...+  ..+
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            4578899999999999999983     368899999998876666778999999999999999999999886654  789


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +||||+++++|.+++.. ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++......
T Consensus       121 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~  198 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD  198 (326)
T ss_dssp             EEECCCTTCBHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred             EEEECCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC-CEeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence            99999999999999975 345699999999999999999999999 9999999999999999999999999999876543


Q ss_pred             C-------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhh-----------hhhhhhccc
Q 018244          210 R-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-----------RNIQTLTDS  271 (359)
Q Consensus       210 ~-------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~-----------~~~~~~~~~  271 (359)
                      .       ...++..|+|||.+.+..++.++||||||+++|+|+||..|+..........           .........
T Consensus       199 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (326)
T 2w1i_A          199 KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN  278 (326)
T ss_dssp             CSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred             ccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhc
Confidence            2       2345678999999998889999999999999999999997765432211110           011111111


Q ss_pred             cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       272 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      ......+...+.++.+|+.+||+.||++|||+.++++.|+.+.+.
T Consensus       279 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~  323 (326)
T 2w1i_A          279 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ  323 (326)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            122233456778899999999999999999999999999998653

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=2.6e-46  Score=346.35  Aligned_cols=249  Identities=19%  Similarity=0.177  Sum_probs=201.8

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-----CcccccccceeeeCCcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----NRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~~~~~~~~~~~~l  130 (359)
                      ..|.+++.||+|+||+||+|.. .++..||||++.... .....+..|+.+++.+.     ||||+++++++...+..++
T Consensus        35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~l  113 (360)
T 3llt_A           35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCL  113 (360)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEE
T ss_pred             CEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEE
Confidence            4678888999999999999995 568899999997532 33456788999999996     9999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC-------------------
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-------------------  191 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~-------------------  191 (359)
                      ||||+ +++|.+++.......+++..+..++.||+.||+|||+. +|+||||||+|||++.                   
T Consensus       114 v~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~  191 (360)
T 3llt_A          114 IFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM-SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI  191 (360)
T ss_dssp             EECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEE
T ss_pred             EEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCcccEEEccccccccccchhcccccccc
Confidence            99999 88999999876556799999999999999999999999 9999999999999975                   


Q ss_pred             ------CCCeEEeccCCcccCCC-CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhh
Q 018244          192 ------DVNPRLSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN  264 (359)
Q Consensus       192 ------~~~~kl~DFg~a~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~  264 (359)
                            ++.+||+|||++..... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||............
T Consensus       192 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~  271 (360)
T 3llt_A          192 QIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMM  271 (360)
T ss_dssp             EEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHH
Confidence                  78999999999986544 34567899999999999999999999999999999999999998754322111110


Q ss_pred             hhhh-------------------c-cccccCCCC--------------------hHHHHHHHHHHHHhcccCCCCCCCHH
Q 018244          265 IQTL-------------------T-DSCLEGQFS--------------------SDEGTELVRLASRCLQYEPRERPNPR  304 (359)
Q Consensus       265 ~~~~-------------------~-~~~~~~~~~--------------------~~~~~~l~~li~~cl~~dp~~Rps~~  304 (359)
                      ....                   . .......++                    ...++.+.+|+.+||+.||++|||+.
T Consensus       272 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~  351 (360)
T 3llt_A          272 ESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPA  351 (360)
T ss_dssp             HHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             HHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHH
Confidence            0000                   0 000000000                    00126788999999999999999999


Q ss_pred             HHHH
Q 018244          305 SLVT  308 (359)
Q Consensus       305 ~il~  308 (359)
                      ++++
T Consensus       352 elL~  355 (360)
T 3llt_A          352 ELLK  355 (360)
T ss_dssp             HHTT
T ss_pred             HHhc
Confidence            9986

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=3.5e-47  Score=356.84  Aligned_cols=249  Identities=16%  Similarity=0.133  Sum_probs=194.1

Q ss_pred             CCccccc-ccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhc-CCCcccccccceeee----CCcc
Q 018244           56 FAMENIV-SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQ-LRNRRLANLLGCCCE----GDER  128 (359)
Q Consensus        56 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~----~~~~  128 (359)
                      +.+|.++ +.||.|+||+||+|.. .++..||||++..     ...+.+|+.++.+ .+||||+++++++..    ...+
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~  134 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL  134 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence            3456666 5789999999999995 4688999999963     2456788888744 589999999999875    5678


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC---CCCeEEeccCCccc
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKN  205 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~---~~~~kl~DFg~a~~  205 (359)
                      +|||||+++|+|.+++.......+++..+..++.||+.||.|||+. +|+||||||+|||++.   ++.+||+|||+++.
T Consensus       135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~  213 (400)
T 1nxk_A          135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  213 (400)
T ss_dssp             EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCcceEEEecCCCCccEEEEecccccc
Confidence            9999999999999999764455799999999999999999999999 9999999999999997   78999999999987


Q ss_pred             CCCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccc--ccCCCChH
Q 018244          206 SRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC--LEGQFSSD  280 (359)
Q Consensus       206 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  280 (359)
                      ....   ....||+.|+|||++.+..++.++|||||||++|+|++|..||...............+....  ........
T Consensus       214 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  293 (400)
T 1nxk_A          214 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE  293 (400)
T ss_dssp             CC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTT
T ss_pred             cCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCccccc
Confidence            6543   345679999999999989999999999999999999999999865432111000001111100  11111234


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 018244          281 EGTELVRLASRCLQYEPRERPNPRSLVTAL  310 (359)
Q Consensus       281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~L  310 (359)
                      .+.++.+||.+||+.||++|||+.+++++.
T Consensus       294 ~s~~~~~li~~~L~~dP~~Rpt~~eil~hp  323 (400)
T 1nxk_A          294 VSEEVKMLIRNLLKTEPTQRMTITEFMNHP  323 (400)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence            678899999999999999999999999863

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=7.5e-47  Score=344.60  Aligned_cols=247  Identities=18%  Similarity=0.203  Sum_probs=206.5

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc------hHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .|.+.+.||+|+||.||+|... ++..||+|.+......      ..+.+.+|+.+++.++||||+++++++......++
T Consensus        13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   92 (321)
T 2a2a_A           13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVL   92 (321)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            5788899999999999999954 6889999999764322      35678999999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC----CeEEeccCCcccC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS  206 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~----~~kl~DFg~a~~~  206 (359)
                      ||||+++++|.+++.  ....+++..++.++.|++.||.|||+. +++|+||||+||+++.++    .+||+|||++...
T Consensus        93 v~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~-~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~  169 (321)
T 2a2a_A           93 ILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI  169 (321)
T ss_dssp             EECCCCSCBHHHHHH--TCSCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCTTSSSCCEEECCCTTCEEC
T ss_pred             EEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCChHHEEEecCCCCcCCEEEccCccceec
Confidence            999999999999996  456789999999999999999999999 999999999999999887    7999999999876


Q ss_pred             CCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                      ...   ....||+.|+|||++.+..++.++||||||+++|+|++|..||..................  .........+.
T Consensus       170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~  247 (321)
T 2a2a_A          170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD--FDEEFFSHTSE  247 (321)
T ss_dssp             CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--CCHHHHTTCCH
T ss_pred             CccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccc--cChhhhcccCH
Confidence            543   3456899999999999889999999999999999999999998765443332221111000  00001123457


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+.+|+.+||+.||++|||+.+++++
T Consensus       248 ~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          248 LAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             HHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            89999999999999999999999874

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.8e-46  Score=341.66  Aligned_cols=256  Identities=21%  Similarity=0.284  Sum_probs=207.2

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCC-----CcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      ...|.+.+.||+|+||+||+|....     +..||||.+...... ....+.+|+.+++.++||||+++++++...+..+
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  122 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM  122 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence            3557778889999999999998532     245999999865432 3456889999999999999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +||||+++|+|.+++.. ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++......
T Consensus       123 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~  200 (333)
T 1mqb_A          123 IITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  200 (333)
T ss_dssp             EEEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred             EEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence            99999999999999965 446799999999999999999999999 9999999999999999999999999999875432


Q ss_pred             C-------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHH
Q 018244          210 R-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE  281 (359)
Q Consensus       210 ~-------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (359)
                      .       ...+|..|+|||.+.+..++.++||||||+++|+|++ |..||..............     ......+...
T Consensus       201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~-----~~~~~~~~~~  275 (333)
T 1mqb_A          201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND-----GFRLPTPMDC  275 (333)
T ss_dssp             ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-----TCCCCCCTTC
T ss_pred             cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHC-----CCcCCCcccC
Confidence            2       2234678999999998899999999999999999999 9988865543322221111     1122234556


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          282 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       282 ~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      +..+.+++.+||+.||++|||+.++++.|+.+.....
T Consensus       276 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~  312 (333)
T 1mqb_A          276 PSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD  312 (333)
T ss_dssp             BHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence            7889999999999999999999999999999876443

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=5.2e-47  Score=368.26  Aligned_cols=254  Identities=24%  Similarity=0.337  Sum_probs=213.9

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      ..|.+.+.||+|+||.||+|.+.++..||||++.... ...+.+.+|+++|+.++|+||+++++++.. +..+|||||+.
T Consensus       267 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~  344 (535)
T 2h8h_A          267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS  344 (535)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred             hhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhc
Confidence            4577888999999999999998887889999998654 335679999999999999999999999876 67899999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-----CC
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RS  211 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-----~~  211 (359)
                      +|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....     ..
T Consensus       345 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  423 (535)
T 2h8h_A          345 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG  423 (535)
T ss_dssp             TEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCS
T ss_pred             CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccC
Confidence            99999999643345689999999999999999999999 9999999999999999999999999999876432     23


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ..++..|+|||++.+..++.++||||||+++|||++ |..||.............     .......+..++..+.+||.
T Consensus       424 ~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~-----~~~~~~~~~~~~~~l~~li~  498 (535)
T 2h8h_A          424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-----RGYRMPCPPECPESLHDLMC  498 (535)
T ss_dssp             TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHH-----TTCCCCCCTTCCHHHHHHHH
T ss_pred             CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----cCCCCCCCCCCCHHHHHHHH
Confidence            345778999999998899999999999999999999 888887654333222211     11222334566788999999


Q ss_pred             HhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          291 RCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      +||+.||++|||+.+|++.|+.+.....
T Consensus       499 ~cl~~dP~~RPt~~~l~~~L~~~~~~~~  526 (535)
T 2h8h_A          499 QCWRKEPEERPTFEYLQAFLEDYFTSTE  526 (535)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred             HHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence            9999999999999999999998865443

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=4.3e-47  Score=344.66  Aligned_cols=254  Identities=17%  Similarity=0.203  Sum_probs=200.5

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCch---HHHHHHHHHHHhcCCCcccccccceeeeCCcc----
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDER----  128 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~----  128 (359)
                      ..|.+++.||+|+||.||+|.. .++..||||++.......   ...+.+|+++++.++||||+++++++......    
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~   91 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   91 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence            5688999999999999999995 678899999998653322   45688999999999999999999998776544    


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      ++||||+++++|.+++..  ...+++..++.++.|++.||.|||++ +++||||||+|||++.++.+||+|||++.....
T Consensus        92 ~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~  168 (311)
T 3ork_A           92 YIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIAD  168 (311)
T ss_dssp             EEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred             EEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence            999999999999999963  45699999999999999999999999 999999999999999999999999999976543


Q ss_pred             C-------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHH
Q 018244          209 G-------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE  281 (359)
Q Consensus       209 ~-------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (359)
                      .       ....||+.|+|||++.+..++.++||||||+++|+|++|+.||..................+  ........
T Consensus       169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~  246 (311)
T 3ork_A          169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP--PSARHEGL  246 (311)
T ss_dssp             -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC--HHHHSTTC
T ss_pred             cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC--cccccCCC
Confidence            2       23457999999999999899999999999999999999999987654433322221111100  00011235


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHH-HHHHHhhh
Q 018244          282 GTELVRLASRCLQYEPRERPNPRSLV-TALVTLQK  315 (359)
Q Consensus       282 ~~~l~~li~~cl~~dp~~Rps~~~il-~~L~~~~~  315 (359)
                      +.++.+++.+||+.||++||++.+++ ..+.....
T Consensus       247 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~  281 (311)
T 3ork_A          247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN  281 (311)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence            67899999999999999999766655 44555443

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=2e-46  Score=335.55  Aligned_cols=249  Identities=18%  Similarity=0.206  Sum_probs=208.0

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ...|++++.||+|+||.||+|.. .++..||+|++.....  ...+.+.+|+.+++.++||||+++++++......++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            35688999999999999999995 4688999999975432  23466889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCC---eEEeccCCcccCCCC
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLMKNSRDG  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~---~kl~DFg~a~~~~~~  209 (359)
                      ||+.+++|.+++..  ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++.   +||+|||++......
T Consensus        85 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~  161 (284)
T 3kk8_A           85 DLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS  161 (284)
T ss_dssp             CCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred             ecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence            99999999998863  45699999999999999999999999 9999999999999986655   999999999766544


Q ss_pred             C---CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          210 R---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       210 ~---~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                      .   ...+|+.|+|||.+.+..++.++||||||+++|+|++|..||..................  .........++++.
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  239 (284)
T 3kk8_A          162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAK  239 (284)
T ss_dssp             CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTTTTTSCHHHH
T ss_pred             ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcccc--CCchhhcccCHHHH
Confidence            3   356899999999999999999999999999999999999998766544333322221111  11111234567899


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHH
Q 018244          287 RLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +|+.+||+.||++|||+.+++++
T Consensus       240 ~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          240 SLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             HHHHHHcccChhhCCCHHHHhcC
Confidence            99999999999999999999874

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.1e-46  Score=342.11  Aligned_cols=240  Identities=18%  Similarity=0.172  Sum_probs=194.7

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP--DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      .|++++.||+|+||+||+|... ++..||||++......  .......|+..+..+ +||||+++++++.+.+..++|||
T Consensus        58 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e  137 (311)
T 3p1a_A           58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTE  137 (311)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             heeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEe
Confidence            5788889999999999999965 7899999998764332  233455666666555 89999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---C
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---R  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---~  210 (359)
                      |+ +++|.+++.. ....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++......   .
T Consensus       138 ~~-~~~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  214 (311)
T 3p1a_A          138 LC-GPSLQQHCEA-WGASLPEAQVWGYLRDTLLALAHLHSQ-GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGE  214 (311)
T ss_dssp             CC-CCBHHHHHHH-HCSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECGGGCEEECCCTTCEECC------
T ss_pred             cc-CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCc
Confidence            99 6699998865 345799999999999999999999999 9999999999999999999999999998776543   3


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchh-HHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ...||+.|+|||++.+ .++.++||||||+++|||++|..++..... ......    ...+    ..+...+.++.+|+
T Consensus       215 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~----~~~~----~~~~~~~~~l~~li  285 (311)
T 3p1a_A          215 VQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQG----YLPP----EFTAGLSSELRSVL  285 (311)
T ss_dssp             CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTT----CCCH----HHHTTSCHHHHHHH
T ss_pred             ccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhcc----CCCc----ccccCCCHHHHHHH
Confidence            4468999999999885 789999999999999999999876654321 111111    1111    11233567899999


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 018244          290 SRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+||+.||++|||+.+++++
T Consensus       286 ~~~L~~dP~~Rpt~~ell~h  305 (311)
T 3p1a_A          286 VMMLEPDPKLRATAEALLAL  305 (311)
T ss_dssp             HHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHcCCChhhCcCHHHHHhC
Confidence            99999999999999999863

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.9e-46  Score=358.06  Aligned_cols=247  Identities=16%  Similarity=0.200  Sum_probs=194.4

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCC--CCchHHHHHHHHHHHhcCCCcccccccceeeeCC------c
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD------E  127 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~  127 (359)
                      ..|++++.||+|+||+||+|.. .++..||||++...  .....+.+.+|+.+|+.++||||+++++++....      .
T Consensus        62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~  141 (464)
T 3ttj_A           62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD  141 (464)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence            5688999999999999999984 46889999999764  2233567889999999999999999999997653      4


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      .+|||||+++ +|.+.+.    ..+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++...
T Consensus       142 ~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~-~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  215 (464)
T 3ttj_A          142 VYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  215 (464)
T ss_dssp             EEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred             EEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence            6999999976 5777663    2489999999999999999999999 99999999999999999999999999998765


Q ss_pred             CC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccc-------------
Q 018244          208 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS-------------  271 (359)
Q Consensus       208 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~-------------  271 (359)
                      ..   ....||+.|+|||++.+..++.++|||||||++|+|++|+.||...............+..+             
T Consensus       216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~  295 (464)
T 3ttj_A          216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR  295 (464)
T ss_dssp             -CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred             CCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhh
Confidence            43   34578999999999999999999999999999999999999997653322111111100000             


Q ss_pred             -----ccc-C------CCC-----------hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          272 -----CLE-G------QFS-----------SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       272 -----~~~-~------~~~-----------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                           ... .      .++           ...+.++.+|+.+||+.||++|||+.+++++
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                 000 0      000           1126789999999999999999999999986

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.5e-46  Score=343.58  Aligned_cols=252  Identities=18%  Similarity=0.270  Sum_probs=204.1

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcE----EEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFR----IAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .+|++++.||+|+||+||+|.. .++..    ||+|.+.... ....+.+.+|+.+++.++||||+++++++... ..++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~   93 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   93 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-CceE
Confidence            5688999999999999999985 34443    5778776433 33467799999999999999999999999865 4889


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      |+||+.+|+|.+++.. ....+++..++.++.|++.||.|||++ +++||||||+|||++.++.+||+|||+++......
T Consensus        94 v~~~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~  171 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             EECCCSSCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred             EEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhC-CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence            9999999999999975 455799999999999999999999999 99999999999999999999999999998654322


Q ss_pred             ------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       211 ------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                            ...+|+.|+|||.+.+..++.++||||||+++|+|++ |..||...........     .........+...+.
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  246 (327)
T 3lzb_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEKGERLPQPPICTI  246 (327)
T ss_dssp             --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH-----HHTTCCCCCCTTBCH
T ss_pred             ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH-----HHcCCCCCCCccCCH
Confidence                  2345778999999999999999999999999999999 8988876543332221     111122233455677


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      ++.+++.+||+.||++|||+.++++.|+.+...
T Consensus       247 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  279 (327)
T 3lzb_A          247 DVYMIMRKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            899999999999999999999999999998754

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=9.7e-47  Score=347.04  Aligned_cols=246  Identities=18%  Similarity=0.234  Sum_probs=200.9

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCC--cccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRN--RRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~  132 (359)
                      ..|.+++.||+|+||.||+|...++..||||++......  ..+.+.+|+.+|..++|  +||+++++++......++||
T Consensus         9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~   88 (343)
T 3dbq_A            9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM   88 (343)
T ss_dssp             CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence            468899999999999999999888999999999765332  34678899999999986  99999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC--
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--  210 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~--  210 (359)
                      |+ .+++|.+++..  ...+++..+..++.||+.||.|||++ +|+||||||+|||++ ++.+||+|||+++......  
T Consensus        89 e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~  163 (343)
T 3dbq_A           89 EC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS  163 (343)
T ss_dssp             CC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred             eC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence            95 57799999974  45799999999999999999999999 999999999999997 6789999999998764332  


Q ss_pred             ----CcCCCccccCcccccC-----------CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccC
Q 018244          211 ----SYSTNLAFTPPEYLRT-----------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG  275 (359)
Q Consensus       211 ----~~~~t~~y~aPE~~~~-----------~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  275 (359)
                          ...||+.|+|||++.+           ..++.++||||||+++|+|++|+.||........   ............
T Consensus       164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~  240 (343)
T 3dbq_A          164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHEI  240 (343)
T ss_dssp             ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---HHHHHHCTTSCC
T ss_pred             ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH---HHHHHhcCCccc
Confidence                4468999999999864           5688999999999999999999999865322111   112222222333


Q ss_pred             CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 018244          276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL  310 (359)
Q Consensus       276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L  310 (359)
                      .++...+.++.+|+.+||+.||++|||+.+++++.
T Consensus       241 ~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp  275 (343)
T 3dbq_A          241 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP  275 (343)
T ss_dssp             CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence            44455567899999999999999999999999763

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=6.9e-47  Score=353.76  Aligned_cols=248  Identities=21%  Similarity=0.285  Sum_probs=191.8

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCC-CcccccccceeeeCC--cceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGD--ERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~--~~~l  130 (359)
                      ..|.+++.||+|+||+||+|.. .++..||||++....  ......+.+|+.+|..+. ||||+++++++...+  ..++
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l   88 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL   88 (388)
T ss_dssp             TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred             CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence            5788999999999999999984 568899999996542  234566889999999997 999999999997654  6899


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC--
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--  208 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~--  208 (359)
                      ||||+. ++|.+++..   ..+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++....  
T Consensus        89 v~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  163 (388)
T 3oz6_A           89 VFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSG-GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR  163 (388)
T ss_dssp             EEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred             EecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence            999997 589998853   5799999999999999999999999 999999999999999999999999999976432  


Q ss_pred             -----------------------CCCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhh
Q 018244          209 -----------------------GRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN  264 (359)
Q Consensus       209 -----------------------~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~  264 (359)
                                             .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||+...........
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i  243 (388)
T 3oz6_A          164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI  243 (388)
T ss_dssp             CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence                                   123468999999999986 56899999999999999999999999765433222211


Q ss_pred             hhhhcccc-----------------------------ccC------------CCChHHHHHHHHHHHHhcccCCCCCCCH
Q 018244          265 IQTLTDSC-----------------------------LEG------------QFSSDEGTELVRLASRCLQYEPRERPNP  303 (359)
Q Consensus       265 ~~~~~~~~-----------------------------~~~------------~~~~~~~~~l~~li~~cl~~dp~~Rps~  303 (359)
                      ...+..+.                             ...            ......++++.+|+.+||+.||++|||+
T Consensus       244 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~  323 (388)
T 3oz6_A          244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISA  323 (388)
T ss_dssp             HHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             HHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCH
Confidence            11100000                             000            0011346789999999999999999999


Q ss_pred             HHHHHH
Q 018244          304 RSLVTA  309 (359)
Q Consensus       304 ~~il~~  309 (359)
                      .+++++
T Consensus       324 ~e~l~H  329 (388)
T 3oz6_A          324 NDALKH  329 (388)
T ss_dssp             HHHTTS
T ss_pred             HHHhCC
Confidence            999976

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.1e-47  Score=356.60  Aligned_cols=255  Identities=18%  Similarity=0.121  Sum_probs=206.9

Q ss_pred             HHhcCCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCC
Q 018244           51 TATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGD  126 (359)
Q Consensus        51 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~  126 (359)
                      ...-...+|++++.||+|+||.||+|.. .+++.||||++.+...   ...+.+.+|..++..++||||+++++++.+.+
T Consensus        55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~  134 (412)
T 2vd5_A           55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN  134 (412)
T ss_dssp             HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred             hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence            3344557788999999999999999996 4689999999975321   12234788999999999999999999999999


Q ss_pred             cceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      .+||||||+++|+|.+++.. ....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus       135 ~~~lVmE~~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~-giiHrDLKp~NILld~~g~vkL~DFGla~~~  212 (412)
T 2vd5_A          135 YLYLVMEYYVGGDLLTLLSK-FGERIPAEMARFYLAEIVMAIDSVHRL-GYVHRDIKPDNILLDRCGHIRLADFGSCLKL  212 (412)
T ss_dssp             EEEEEECCCCSCBHHHHHHH-HSSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEEcCCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccCHHHeeecCCCCEEEeechhheec
Confidence            99999999999999999964 234799999999999999999999999 9999999999999999999999999999876


Q ss_pred             CCCC-----CcCCCccccCccccc-------CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccccc
Q 018244          207 RDGR-----SYSTNLAFTPPEYLR-------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE  274 (359)
Q Consensus       207 ~~~~-----~~~~t~~y~aPE~~~-------~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  274 (359)
                      ....     ...||+.|+|||++.       +..++.++|||||||++|||++|+.||................... ..
T Consensus       213 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~-~~  291 (412)
T 2vd5_A          213 RADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHL-SL  291 (412)
T ss_dssp             CTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC-CC
T ss_pred             cCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCc-CC
Confidence            5432     357899999999987       3568999999999999999999999998765443332222111000 01


Q ss_pred             CCCChHHHHHHHHHHHHhcccCCCCC---CCHHHHHHH
Q 018244          275 GQFSSDEGTELVRLASRCLQYEPRER---PNPRSLVTA  309 (359)
Q Consensus       275 ~~~~~~~~~~l~~li~~cl~~dp~~R---ps~~~il~~  309 (359)
                      +..+...+.++.+||.+||. +|.+|   |++++++++
T Consensus       292 p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          292 PLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             C----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred             CccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence            11224567889999999999 99998   589998865

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=4.2e-47  Score=367.78  Aligned_cols=252  Identities=19%  Similarity=0.245  Sum_probs=209.9

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      ...+|.+++.||+|+||.||+|.. .+|+.||+|++....   ......+.+|+++|+.++||||+++++++.+.+..++
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence            345688889999999999999995 478999999996532   1234568899999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-  209 (359)
                      ||||+++|+|.+++.......+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..... 
T Consensus       262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~-gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~  340 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ  340 (576)
T ss_dssp             EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred             EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence            99999999999999765555699999999999999999999999 9999999999999999999999999999876544 


Q ss_pred             --CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       210 --~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                        ....||+.|+|||++.+..++.++|||||||++|||++|..||...............+..  ....++...+.++.+
T Consensus       341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~--~~~~~p~~~s~~~~d  418 (576)
T 2acx_A          341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE--VPEEYSERFSPQARS  418 (576)
T ss_dssp             CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH--CCCCCCTTSCHHHHH
T ss_pred             cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc--ccccCCccCCHHHHH
Confidence              2457899999999999888999999999999999999999998764211111111111111  122345667789999


Q ss_pred             HHHHhcccCCCCCC-----CHHHHHHH
Q 018244          288 LASRCLQYEPRERP-----NPRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rp-----s~~~il~~  309 (359)
                      |+.+||+.||++||     ++.+++++
T Consensus       419 LI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          419 LCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             HHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             HHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence            99999999999999     78888764

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.6e-46  Score=343.24  Aligned_cols=257  Identities=22%  Similarity=0.310  Sum_probs=209.7

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcE--EEEEEeCCCC-CchHHHHHHHHHHHhcC-CCcccccccceeeeCCcce
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFR--IAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  129 (359)
                      ++.+|.+.+.||+|+||.||+|.. .++..  +|+|.+.... ....+.+.+|+++++.+ +||||+++++++...+..+
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~  102 (327)
T 1fvr_A           23 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY  102 (327)
T ss_dssp             CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred             cHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence            346788899999999999999984 45554  4999987532 23345688999999999 8999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCe
Q 018244          130 LVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP  195 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~  195 (359)
                      +||||+++|+|.+++....              ...+++..++.++.||+.||.|||++ +++||||||+||+++.++.+
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCE
T ss_pred             EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCccceEEEcCCCeE
Confidence            9999999999999997432              24789999999999999999999999 99999999999999999999


Q ss_pred             EEeccCCcccCCC---CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccc
Q 018244          196 RLSCFGLMKNSRD---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDS  271 (359)
Q Consensus       196 kl~DFg~a~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~  271 (359)
                      ||+|||+++....   .....+++.|+|||.+.+..++.++||||||+++|+|++ |..||..............     
T Consensus       182 kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~-----  256 (327)
T 1fvr_A          182 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-----  256 (327)
T ss_dssp             EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGG-----
T ss_pred             EEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhc-----
Confidence            9999999875432   223456788999999988889999999999999999998 9988876544333222211     


Q ss_pred             cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 018244          272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT  317 (359)
Q Consensus       272 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~  317 (359)
                      ......+...+.++.+|+.+||+.||++|||+.++++.|+.+....
T Consensus       257 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  302 (327)
T 1fvr_A          257 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  302 (327)
T ss_dssp             TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence            1122334556788999999999999999999999999999987654

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=2.3e-46  Score=338.74  Aligned_cols=248  Identities=15%  Similarity=0.162  Sum_probs=205.5

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      ..|.+++.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++......++||||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV   88 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence            4678889999999999999995 468899999998765445567889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee---CCCCCeEEeccCCcccCCCCC--
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDGR--  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll---~~~~~~kl~DFg~a~~~~~~~--  210 (359)
                      ++++|.+++..  ...+++..+..++.|++.||.|||+. +++|+||||+||++   ++++.++|+|||++.......  
T Consensus        89 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~  165 (304)
T 2jam_A           89 SGGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHEN-GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS  165 (304)
T ss_dssp             CSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTH
T ss_pred             CCccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccc
Confidence            99999999863  35689999999999999999999999 99999999999999   788999999999987654432  


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ...+|+.|+|||.+.+..++.++||||||+++|+|++|..||..................  .........+.++.+++.
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~li~  243 (304)
T 2jam_A          166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYE--FESPFWDDISESAKDFIC  243 (304)
T ss_dssp             HHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCC--CCTTTTTTSCHHHHHHHH
T ss_pred             cccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--CCccccccCCHHHHHHHH
Confidence            335789999999999889999999999999999999999998765443332222111111  111223456788999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~  309 (359)
                      +||+.||++|||+.+++++
T Consensus       244 ~~l~~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          244 HLLEKDPNERYTCEKALSH  262 (304)
T ss_dssp             HHHCSSTTTSCCHHHHHTS
T ss_pred             HHcCCChhHCcCHHHHhcC
Confidence            9999999999999999975

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=2.4e-46  Score=357.59  Aligned_cols=249  Identities=15%  Similarity=0.158  Sum_probs=184.7

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeC-----Ccc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DER  128 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~  128 (359)
                      ..|.+++.||+|+||+||+|.. .++..||||++.....  ...+.+.+|+++|+.++||||+++++++...     ..+
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence            5689999999999999999984 4688999999976432  2356789999999999999999999998543     568


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      |+||||+. ++|.+++.  ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus       133 ~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~-~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  208 (458)
T 3rp9_A          133 YVVLEIAD-SDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSA-GILHRDLKPANCLVNQDCSVKVCDFGLARTVDY  208 (458)
T ss_dssp             EEEECCCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred             EEEEeccc-cchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhC-CcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence            99999985 68999986  456799999999999999999999999 999999999999999999999999999986542


Q ss_pred             C-------------------------------CCcCCCccccCccccc-CCCCCCccchhhHHHHHHHHHh---------
Q 018244          209 G-------------------------------RSYSTNLAFTPPEYLR-TGRVTPESVMYSFGTLLLDLLS---------  247 (359)
Q Consensus       209 ~-------------------------------~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt---------  247 (359)
                      .                               ....||+.|+|||++. +..++.++|||||||++|||++         
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~  288 (458)
T 3rp9_A          209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH  288 (458)
T ss_dssp             CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred             ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence            1                               2345789999999864 5669999999999999999999         


Q ss_pred             --CCCCCCcchhH--------------------HHhhhhhh-------------------hhc---ccccc---CCCChH
Q 018244          248 --GKHIPPSHALD--------------------LIRDRNIQ-------------------TLT---DSCLE---GQFSSD  280 (359)
Q Consensus       248 --g~~p~~~~~~~--------------------~~~~~~~~-------------------~~~---~~~~~---~~~~~~  280 (359)
                        |+++|++....                    ........                   ...   .....   ......
T Consensus       289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (458)
T 3rp9_A          289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA  368 (458)
T ss_dssp             GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred             ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence              55555443210                    00000000                   000   00000   001123


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          281 EGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+.++.+|+.+||..||++|||+++++++
T Consensus       369 ~s~~~~dLl~~mL~~dP~~R~t~~e~L~H  397 (458)
T 3rp9_A          369 SSADAIHLLKRMLVFNPNKRITINECLAH  397 (458)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            46789999999999999999999999986

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=3.7e-46  Score=332.72  Aligned_cols=243  Identities=18%  Similarity=0.223  Sum_probs=205.7

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      ..|.+.+.||+|+||.||+|... ++..+|+|.+........+.+.+|+++++.++||||+++++++.+....++||||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC   88 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence            35788889999999999999954 57789999998765566788999999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee---CCCCCeEEeccCCcccCCCC---
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll---~~~~~~kl~DFg~a~~~~~~---  209 (359)
                      ++++|.+++..  ...+++..++.++.|++.||.|||++ +++|+||||+||++   +.++.++|+|||++......   
T Consensus        89 ~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~  165 (277)
T 3f3z_A           89 TGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKL-NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM  165 (277)
T ss_dssp             CSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCB
T ss_pred             CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccch
Confidence            99999998863  45689999999999999999999999 99999999999999   78899999999999865543   


Q ss_pred             CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCCh----HHHHHH
Q 018244          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS----DEGTEL  285 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l  285 (359)
                      ....+|+.|+|||.+.+ .++.++||||||+++|+|++|..||................      ...+.    ..++.+
T Consensus       166 ~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~  238 (277)
T 3f3z_A          166 RTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGT------FTFPEKDWLNVSPQA  238 (277)
T ss_dssp             CCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC------CCCCHHHHTTSCHHH
T ss_pred             hccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC------CCCCchhhhcCCHHH
Confidence            34568999999999875 48999999999999999999999987654333222221111      01111    356789


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHH
Q 018244          286 VRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+|+.+||+.||++|||+.+++++
T Consensus       239 ~~li~~~l~~dp~~R~s~~~~l~h  262 (277)
T 3f3z_A          239 ESLIRRLLTKSPKQRITSLQALEH  262 (277)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             HHHHHHHccCChhhCcCHHHHhcC
Confidence            999999999999999999999864

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.8e-46  Score=346.05  Aligned_cols=248  Identities=16%  Similarity=0.223  Sum_probs=196.3

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCC------c
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD------E  127 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~  127 (359)
                      ..|.+++.||+|+||.||+|.. .+|..||||++......  ..+.+.+|+++|+.++||||+++++++....      .
T Consensus        25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~  104 (367)
T 1cm8_A           25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD  104 (367)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred             ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence            4688999999999999999995 56899999999654322  3456889999999999999999999997653      4


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      .++||||+ +++|.+++..   ..+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++...
T Consensus       105 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  179 (367)
T 1cm8_A          105 FYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQAD  179 (367)
T ss_dssp             CEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence            59999999 7799999853   5699999999999999999999999 99999999999999999999999999998765


Q ss_pred             CC-CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhc----------------
Q 018244          208 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT----------------  269 (359)
Q Consensus       208 ~~-~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~----------------  269 (359)
                      .. ....+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||.................                
T Consensus       180 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~  259 (367)
T 1cm8_A          180 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK  259 (367)
T ss_dssp             SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred             cccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHH
Confidence            43 34578999999999887 6799999999999999999999999876533221111110000                


Q ss_pred             ------ccc---ccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          270 ------DSC---LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       270 ------~~~---~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                            ...   .........++++.+|+.+||..||++|||+.+++++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          260 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  308 (367)
T ss_dssp             HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence                  000   0001123456789999999999999999999999985

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=2e-46  Score=335.26  Aligned_cols=252  Identities=21%  Similarity=0.266  Sum_probs=206.3

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCC----CcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      ..+|.+.+.||+|+||+||+|...+    +..||+|.+..... ...+.+.+|+.+++.++||||+++++++.+ +..++
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~   89 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI   89 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence            3578888899999999999998532    34699999986533 345678999999999999999999999865 46799


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      ||||+++++|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++.......
T Consensus        90 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  167 (281)
T 3cc6_A           90 IMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESI-NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED  167 (281)
T ss_dssp             EEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred             EEecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence            9999999999999965 345689999999999999999999999 99999999999999999999999999988654432


Q ss_pred             -----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHH
Q 018244          211 -----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE  284 (359)
Q Consensus       211 -----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (359)
                           ...+++.|+|||.+.+..++.++||||||+++|+|++ |+.||.............     .......+...++.
T Consensus       168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  242 (281)
T 3cc6_A          168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE-----KGDRLPKPDLCPPV  242 (281)
T ss_dssp             -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHH-----HTCCCCCCTTCCHH
T ss_pred             ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHh-----cCCCCCCCCCCCHH
Confidence                 3345778999999998889999999999999999998 998886543222211111     11112234456778


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          285 LVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       285 l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      +.+++.+||+.||++|||+.++++.|+.+..
T Consensus       243 l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          243 LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999999998755

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=8.4e-47  Score=337.80  Aligned_cols=247  Identities=19%  Similarity=0.288  Sum_probs=205.9

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeee------------
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE------------  124 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------------  124 (359)
                      .|.+++.||+|+||.||+|... +++.||+|.+....    +.+.+|+++++.++||||+++++++..            
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~   87 (284)
T 2a19_B           12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNS   87 (284)
T ss_dssp             HEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--------
T ss_pred             ccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccc
Confidence            5788888999999999999965 78999999997643    346789999999999999999998854            


Q ss_pred             ----CCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEecc
Q 018244          125 ----GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF  200 (359)
Q Consensus       125 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DF  200 (359)
                          ....++||||+++++|.+++.......+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+||
T Consensus        88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Df  166 (284)
T 2a19_B           88 SRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLINRDLKPSNIFLVDTKQVKIGDF  166 (284)
T ss_dssp             -CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCC
T ss_pred             cccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCHHHEEEcCCCCEEECcc
Confidence                34589999999999999999765556799999999999999999999999 9999999999999999999999999


Q ss_pred             CCcccCCCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCC
Q 018244          201 GLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF  277 (359)
Q Consensus       201 g~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (359)
                      |++......   ....+|+.|+|||.+.+..++.++||||||+++|+|++|..|+.....  ..    ..+..    ...
T Consensus       167 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--~~----~~~~~----~~~  236 (284)
T 2a19_B          167 GLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK--FF----TDLRD----GII  236 (284)
T ss_dssp             TTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH--HH----HHHHT----TCC
T ss_pred             hhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH--HH----HHhhc----ccc
Confidence            998876543   345688999999999988899999999999999999999976543211  11    11111    122


Q ss_pred             ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccC
Q 018244          278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV  319 (359)
Q Consensus       278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~  319 (359)
                      +...+..+.+++.+||+.||++|||+.++++.|..+.+....
T Consensus       237 ~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~  278 (284)
T 2a19_B          237 SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK  278 (284)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence            344567799999999999999999999999999998765443

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=2.2e-46  Score=340.46  Aligned_cols=247  Identities=17%  Similarity=0.176  Sum_probs=197.3

Q ss_pred             ccccc-ccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEec
Q 018244           58 MENIV-SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~-~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .|.++ +.||+|+||+||+|. ..++..||||++..........+.+|++++.++ +||||+++++++...+..++||||
T Consensus        13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~   92 (316)
T 2ac3_A           13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK   92 (316)
T ss_dssp             SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence            46665 568999999999999 457889999999876655577899999999985 799999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCC---eEEeccCCcccCCCC--
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLMKNSRDG--  209 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~---~kl~DFg~a~~~~~~--  209 (359)
                      +++|+|.+++..  ...+++..+..++.||+.||+|||++ +++||||||+|||++.++.   +||+|||++......  
T Consensus        93 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~  169 (316)
T 2ac3_A           93 MRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNK-GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD  169 (316)
T ss_dssp             CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred             CCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence            999999999974  35689999999999999999999999 9999999999999998766   999999998754321  


Q ss_pred             ---------CCcCCCccccCcccccC-----CCCCCccchhhHHHHHHHHHhCCCCCCcchhHH-----------Hhhhh
Q 018244          210 ---------RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-----------IRDRN  264 (359)
Q Consensus       210 ---------~~~~~t~~y~aPE~~~~-----~~~~~~~Di~slG~il~elltg~~p~~~~~~~~-----------~~~~~  264 (359)
                               ....||+.|+|||++.+     ..++.++||||||+++|+|++|..||.......           .....
T Consensus       170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  249 (316)
T 2ac3_A          170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML  249 (316)
T ss_dssp             ------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHH
T ss_pred             cccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHH
Confidence                     13358999999999875     458899999999999999999999986542100           00000


Q ss_pred             hhhhccccccCCCC----hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          265 IQTLTDSCLEGQFS----SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       265 ~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ...+....  ..++    ...+.++.+|+.+||+.||++|||+.+++++
T Consensus       250 ~~~i~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          250 FESIQEGK--YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             HHHHHHCC--CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHhccC--cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            11111110  1112    1346789999999999999999999999874

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=7.9e-47  Score=348.83  Aligned_cols=256  Identities=17%  Similarity=0.160  Sum_probs=205.6

Q ss_pred             CcccccccCCCCCCcEEEEEEeC---------CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCccccc----------
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE---------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLAN----------  117 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~---------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~----------  117 (359)
                      ..|.+.+.||+|+||.||+|...         ++..||+|.+...     +.+.+|+++++.++||||++          
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            57889999999999999999965         3789999999754     35788999999999999998          


Q ss_pred             -----ccceeee-CCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC
Q 018244          118 -----LLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD  191 (359)
Q Consensus       118 -----~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~  191 (359)
                           +++++.. ....++||||+ +++|.+++.......+++..++.++.||+.||.|||++ +++||||||+|||++.
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dikp~NIl~~~  194 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN-EYVHGNVTAENIFVDP  194 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCCGGGEEEET
T ss_pred             cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCHHHEEEcC
Confidence                 4566655 67889999999 89999999764457899999999999999999999999 9999999999999999


Q ss_pred             CC--CeEEeccCCcccCCCC-----------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcch--
Q 018244          192 DV--NPRLSCFGLMKNSRDG-----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA--  256 (359)
Q Consensus       192 ~~--~~kl~DFg~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~--  256 (359)
                      ++  .+||+|||+++.....           ....||+.|+|||++.+..++.++||||||+++|+|++|+.||....  
T Consensus       195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~  274 (352)
T 2jii_A          195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN  274 (352)
T ss_dssp             TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred             CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence            88  9999999999765422           23468899999999998899999999999999999999999887642  


Q ss_pred             hHHHhhhhhhhhcccc--ccC--CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccCC
Q 018244          257 LDLIRDRNIQTLTDSC--LEG--QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVS  320 (359)
Q Consensus       257 ~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~  320 (359)
                      ....... ........  ...  ......+.++.+|+.+||+.||++|||+.++++.|+.+.......
T Consensus       275 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~  341 (352)
T 2jii_A          275 TEDIMKQ-KQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVS  341 (352)
T ss_dssp             HHHHHHH-HHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHH-HHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCC
Confidence            1111111 11111000  000  001234678999999999999999999999999999988765544

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=1.6e-46  Score=336.41  Aligned_cols=244  Identities=16%  Similarity=0.182  Sum_probs=204.4

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC--CchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA--WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      .+|++++.||+|+||+||+|... ++..||+|.+....  ......+.+|+..+..+ +||||+++++++...+..++||
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~   90 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN   90 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            36788899999999999999964 78999999998643  23456788999999999 8999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC-------------------
Q 018244          133 EYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-------------------  191 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~-------------------  191 (359)
                      ||+++++|.+++....  ...+++..++.++.||+.||.|||++ +++|+||||+||+++.                   
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~  169 (289)
T 1x8b_A           91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM-SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN  169 (289)
T ss_dssp             ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEC--------------------
T ss_pred             EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence            9999999999996432  25689999999999999999999999 9999999999999984                   


Q ss_pred             CCCeEEeccCCcccCCCCCCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcc
Q 018244          192 DVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD  270 (359)
Q Consensus       192 ~~~~kl~DFg~a~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~  270 (359)
                      ...+||+|||.+..........+|+.|+|||.+.+. .++.++||||||+++|+|++|..++........       +..
T Consensus       170 ~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~-------~~~  242 (289)
T 1x8b_A          170 KVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHE-------IRQ  242 (289)
T ss_dssp             CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHH-------HHT
T ss_pred             ceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHH-------HHc
Confidence            447999999999988877777899999999999866 566899999999999999999976644321111       111


Q ss_pred             ccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          271 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       271 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                       ......+...+.++.+|+.+||+.||++|||+.+++++
T Consensus       243 -~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          243 -GRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             -TCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             -CCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence             11122344567789999999999999999999999864

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-46  Score=348.06  Aligned_cols=255  Identities=22%  Similarity=0.284  Sum_probs=198.2

Q ss_pred             CcccccccCCCCCCcEEEEEEeC--C--CcEEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeee-CCcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE--N--QFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~l  130 (359)
                      ..|.+.+.||+|+||+||+|...  +  +..||+|.+.... ....+.+.+|+.+++.++||||+++++++.. .+..++
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l  168 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  168 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence            34677788999999999999853  2  2468999987543 3346679999999999999999999998654 567899


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-  209 (359)
                      ||||+++|+|.+++.. ....+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..... 
T Consensus       169 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~  246 (373)
T 3c1x_A          169 VLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  246 (373)
T ss_dssp             EEECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred             EEECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CEecCccchheEEECCCCCEEEeeccccccccccc
Confidence            9999999999999964 455789999999999999999999999 9999999999999999999999999999865332 


Q ss_pred             -------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhC-CCCCCcchhHHHhhhhhhhhccccccCCCChHH
Q 018244          210 -------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE  281 (359)
Q Consensus       210 -------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (359)
                             ....+|+.|+|||.+.+..++.++||||||+++|||+|| ..||............     ........+...
T Consensus       247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~-----~~~~~~~~p~~~  321 (373)
T 3c1x_A          247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-----LQGRRLLQPEYC  321 (373)
T ss_dssp             -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHH-----HTTCCCCCCTTC
T ss_pred             cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHH-----HcCCCCCCCCCC
Confidence                   223456789999999989999999999999999999995 5555433211111111     111112234456


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          282 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       282 ~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      +..+.+++.+||+.||++|||+.++++.|+.+.....
T Consensus       322 ~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~  358 (373)
T 3c1x_A          322 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  358 (373)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence            7789999999999999999999999999999876443

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=1.5e-46  Score=342.53  Aligned_cols=253  Identities=21%  Similarity=0.325  Sum_probs=209.1

Q ss_pred             CcccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      ..|.+.+.||+|+||.||+|...      ++..||+|.+...... ....+.+|+.+++.++||||+++++++...+..+
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~  104 (322)
T 1p4o_A           25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL  104 (322)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred             hheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccE
Confidence            46788889999999999999853      3678999999865432 3456889999999999999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccC
Q 018244          130 LVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG  201 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg  201 (359)
                      +||||+++|+|.+++....        ...+++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+|||
T Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~NIli~~~~~~kl~Dfg  183 (322)
T 1p4o_A          105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG  183 (322)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCSGGGEEECTTCCEEECCTT
T ss_pred             EEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CCccCCCccceEEEcCCCeEEECcCc
Confidence            9999999999999986421        24679999999999999999999999 99999999999999999999999999


Q ss_pred             CcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhcccccc
Q 018244          202 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE  274 (359)
Q Consensus       202 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~  274 (359)
                      ++......      ....+|+.|+|||++.+..++.++||||||+++|+|++ |..||...............     ..
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~  258 (322)
T 1p4o_A          184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG-----GL  258 (322)
T ss_dssp             CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTT-----CC
T ss_pred             cccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcC-----Cc
Confidence            98765432      22345788999999998889999999999999999999 77777654333322221111     11


Q ss_pred             CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      ...+...+..+.+++.+||+.||++|||+.++++.|+.+..
T Consensus       259 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          259 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence            22345567789999999999999999999999999988644

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=4.2e-46  Score=338.29  Aligned_cols=255  Identities=22%  Similarity=0.304  Sum_probs=200.3

Q ss_pred             CCcccccccCCCCCCcEEEEEEeC----CCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCc--
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDE--  127 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--  127 (359)
                      ...|.+.+.||+|+||.||+|...    .+..||+|.+......  ..+.+.+|+.+++.++||||+++++++.....  
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  112 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG  112 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence            356888889999999999999843    3457999999865332  34668999999999999999999999987553  


Q ss_pred             ---ceEEEecCCCCCHhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEecc
Q 018244          128 ---RLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF  200 (359)
Q Consensus       128 ---~~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DF  200 (359)
                         .++||||+.+|+|.+++...    ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+||
T Consensus       113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dikp~NIli~~~~~~kl~Df  191 (313)
T 3brb_A          113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR-NFLHRDLAARNCMLRDDMTVCVADF  191 (313)
T ss_dssp             --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCSGGGEEECTTSCEEECSC
T ss_pred             CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCcEEEeec
Confidence               49999999999999998531    345799999999999999999999999 9999999999999999999999999


Q ss_pred             CCcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccc
Q 018244          201 GLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCL  273 (359)
Q Consensus       201 g~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~  273 (359)
                      |++......      ....+++.|+|||.+.+..++.++||||||+++|+|++ |..||...............     .
T Consensus       192 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~  266 (313)
T 3brb_A          192 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG-----H  266 (313)
T ss_dssp             SCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-----C
T ss_pred             CcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcC-----C
Confidence            999765432      23345788999999998899999999999999999999 77777654333222221111     1


Q ss_pred             cCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      ....+...+.++.+++.+||+.||++|||+.++++.|+.+...
T Consensus       267 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~  309 (313)
T 3brb_A          267 RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES  309 (313)
T ss_dssp             CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            2233455677899999999999999999999999999998653

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=3.4e-46  Score=334.25  Aligned_cols=246  Identities=18%  Similarity=0.257  Sum_probs=208.4

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      ...+|.+.+.||+|+||.||+|... ++..||+|++....   ......+.+|+++++.++||||+++++++...+..++
T Consensus        12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   91 (284)
T 2vgo_A           12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL   91 (284)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence            4567899999999999999999954 67889999986432   1224578899999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-  209 (359)
                      ||||+++++|.+++..  ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++...... 
T Consensus        92 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~  168 (284)
T 2vgo_A           92 MLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYCHER-KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR  168 (284)
T ss_dssp             EECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred             EEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence            9999999999999974  34689999999999999999999999 9999999999999999999999999998765432 


Q ss_pred             -CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                       ....+++.|+|||.+.+..++.++||||||+++|+|++|..||..............      ....++...+.++.++
T Consensus       169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l  242 (284)
T 2vgo_A          169 RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN------VDLKFPPFLSDGSKDL  242 (284)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT------TCCCCCTTSCHHHHHH
T ss_pred             cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhc------cccCCCCcCCHHHHHH
Confidence             345689999999999988999999999999999999999999876543322221111      1122345567889999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+||+.||++|||+.+++++
T Consensus       243 i~~~l~~~p~~Rps~~~ll~h  263 (284)
T 2vgo_A          243 ISKLLRYHPPQRLPLKGVMEH  263 (284)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTC
T ss_pred             HHHHhhcCHhhCCCHHHHhhC
Confidence            999999999999999999974

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=3e-46  Score=339.77  Aligned_cols=256  Identities=18%  Similarity=0.196  Sum_probs=206.4

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeee----CCcceE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLL  130 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~l  130 (359)
                      ...|.+++.||+|+||.||+|.. .++..||||++........+.+.+|+++++.++||||+++++++..    ....++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            35788999999999999999995 6789999999976655566788999999999999999999999873    347899


Q ss_pred             EEecCCCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          131 VAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      ||||+.+|+|.+++...  ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++.....
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~  186 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK-GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI  186 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence            99999999999998642  356799999999999999999999999 999999999999999999999999999876532


Q ss_pred             C-------------CCcCCCccccCcccccCCC---CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccc
Q 018244          209 G-------------RSYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC  272 (359)
Q Consensus       209 ~-------------~~~~~t~~y~aPE~~~~~~---~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~  272 (359)
                      .             ....+|+.|+|||.+.+..   ++.++||||||+++|+|++|+.||.......   ..........
T Consensus       187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~~~~~~  263 (317)
T 2buj_A          187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG---DSVALAVQNQ  263 (317)
T ss_dssp             EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT---SCHHHHHHCC
T ss_pred             ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc---chhhHHhhcc
Confidence            1             1224688999999987654   6889999999999999999998875321100   0001111111


Q ss_pred             ccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       273 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      .........+.++.+++.+||+.||++|||+.++++.|+.+..
T Consensus       264 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          264 LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence            1122234567789999999999999999999999999998854

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=4.2e-47  Score=349.72  Aligned_cols=255  Identities=16%  Similarity=0.119  Sum_probs=198.2

Q ss_pred             CcccccccCCCCCCcEEEEEEeC----CCcEEEEEEeCCCCCch-----------HHHHHHHHHHHhcCCCcccccccce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWPD-----------ARQFLEEARAVGQLRNRRLANLLGC  121 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~~~~~  121 (359)
                      ..|.+.+.||+|+||.||+|...    ++..+|+|++.......           ...+.+|+..+..++||||++++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            57889999999999999999964    57789999998654321           1235678899999999999999999


Q ss_pred             eee----CCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC--Ce
Q 018244          122 CCE----GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV--NP  195 (359)
Q Consensus       122 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~--~~  195 (359)
                      +..    ....++||||+ +++|.+++..  ...+++..++.++.||+.||+|||+. +++||||||+|||++.++  .+
T Consensus       117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~  192 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERL-GIDLQKISGQ--NGTFKKSTVLQLGIRMLDVLEYIHEN-EYVHGDIKAANLLLGYKNPDQV  192 (345)
T ss_dssp             EEEESSSCEEEEEEEECE-EEEHHHHCBG--GGBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEESSSTTSE
T ss_pred             cccccCCCcEEEEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCcCHHHEEEccCCCCcE
Confidence            988    67899999999 8999999964  33799999999999999999999999 999999999999998877  99


Q ss_pred             EEeccCCcccCCCC-----------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhh
Q 018244          196 RLSCFGLMKNSRDG-----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN  264 (359)
Q Consensus       196 kl~DFg~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~  264 (359)
                      ||+|||+++.....           ....||+.|+|||++.+..++.++||||||+++|+|++|+.||.....+......
T Consensus       193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~  272 (345)
T 2v62_A          193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT  272 (345)
T ss_dssp             EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH
T ss_pred             EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH
Confidence            99999999765322           2346899999999999888999999999999999999999998543211111100


Q ss_pred             ----hhhhcccccc-CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          265 ----IQTLTDSCLE-GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       265 ----~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                          .......... .......+.++.+++.+||+.||++|||+.++++.|+.+..
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  328 (345)
T 2v62_A          273 AKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI  328 (345)
T ss_dssp             HHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred             HHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence                0000000000 00011456689999999999999999999999999988654

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.5e-46  Score=340.23  Aligned_cols=255  Identities=16%  Similarity=0.221  Sum_probs=199.8

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC--CCcccccccceeeeC----CcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL--RNRRLANLLGCCCEG----DERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~----~~~~l  130 (359)
                      ..|++++.||+|+||.||+|+.. +..||||++....   ...+.+|.+++..+  +||||+++++++...    ...++
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l  112 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYL  112 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEE
T ss_pred             cceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEE
Confidence            36788999999999999999975 7899999986432   34455566666555  899999999999887    67899


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-------CcccccCCCCCeeeCCCCCeEEeccCCc
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE-------RALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-------~ivH~Dikp~NIll~~~~~~kl~DFg~a  203 (359)
                      ||||+++|+|.+++..   ..+++..++.++.|++.||.|||+..       +++||||||+|||++.++.+||+|||++
T Consensus       113 v~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a  189 (337)
T 3mdy_A          113 ITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  189 (337)
T ss_dssp             EECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence            9999999999999953   46999999999999999999999752       8999999999999999999999999999


Q ss_pred             ccCCCCC--------CcCCCccccCcccccCCCCCCc------cchhhHHHHHHHHHhC----------CCCCCcchhHH
Q 018244          204 KNSRDGR--------SYSTNLAFTPPEYLRTGRVTPE------SVMYSFGTLLLDLLSG----------KHIPPSHALDL  259 (359)
Q Consensus       204 ~~~~~~~--------~~~~t~~y~aPE~~~~~~~~~~------~Di~slG~il~elltg----------~~p~~~~~~~~  259 (359)
                      .......        ...||+.|+|||++.+...+..      +||||||+++|||+||          ..|+.......
T Consensus       190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~  269 (337)
T 3mdy_A          190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD  269 (337)
T ss_dssp             EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence            7654322        3468999999999987766665      9999999999999999          54443221100


Q ss_pred             Hh-hhhhhhhccccccCCCC-----hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          260 IR-DRNIQTLTDSCLEGQFS-----SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       260 ~~-~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      .. ................+     ..++.++.+|+.+||+.||++|||+.++++.|+.+.+..+
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~  334 (337)
T 3mdy_A          270 PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD  334 (337)
T ss_dssp             CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred             CchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence            00 00000011111112222     3678899999999999999999999999999999977654

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.3e-46  Score=335.89  Aligned_cols=249  Identities=17%  Similarity=0.214  Sum_probs=189.0

Q ss_pred             hcCCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcc
Q 018244           53 TSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (359)
Q Consensus        53 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  128 (359)
                      ...+.+|.+.+.||+|+||.||+|.. .++..||+|.+.....   ...+.+.+|+.+++.++||||+++++++.+.+..
T Consensus         7 g~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   86 (278)
T 3cok_A            7 GEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYV   86 (278)
T ss_dssp             CSSGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEE
T ss_pred             ccccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeE
Confidence            44567899999999999999999995 5788999999974321   2246788999999999999999999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      ++||||+++++|.+++.. ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++.....
T Consensus        87 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  164 (278)
T 3cok_A           87 YLVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSH-GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM  164 (278)
T ss_dssp             EEEEECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred             EEEEecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence            999999999999999864 346789999999999999999999999 999999999999999999999999999987543


Q ss_pred             C----CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHH
Q 018244          209 G----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE  284 (359)
Q Consensus       209 ~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (359)
                      .    ....+|+.|+|||.+.+..++.++||||||+++|+|++|+.||.............    ..  ....+...+.+
T Consensus       165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~----~~--~~~~~~~~~~~  238 (278)
T 3cok_A          165 PHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV----LA--DYEMPSFLSIE  238 (278)
T ss_dssp             ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CC----SS--CCCCCTTSCHH
T ss_pred             CCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHh----hc--ccCCccccCHH
Confidence            2    23567899999999998889999999999999999999999887543222111111    00  11234456778


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          285 LVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       285 l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+++.+||+.||++|||+.+++++
T Consensus       239 ~~~li~~~l~~dp~~Rps~~~~l~h  263 (278)
T 3cok_A          239 AKDLIHQLLRRNPADRLSLSSVLDH  263 (278)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHHHcccCHhhCCCHHHHhcC
Confidence            9999999999999999999999863

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=3e-46  Score=349.39  Aligned_cols=245  Identities=18%  Similarity=0.237  Sum_probs=200.1

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCC--CcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLR--NRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ..|.+++.||+|+||+||+|...++..||||++.....  ...+.+.+|+.+|..++  ||||+++++++...+..+|||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            35889999999999999999987789999999976532  23567899999999996  599999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---  209 (359)
                      | +.+++|.+++..  ...+++..+..++.||+.||.|||+. +|+||||||+|||++ ++.+||+|||+++.....   
T Consensus       136 E-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~  210 (390)
T 2zmd_A          136 E-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS  210 (390)
T ss_dssp             E-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred             e-cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence            9 467899999974  45789999999999999999999999 999999999999996 589999999999876433   


Q ss_pred             ---CCcCCCccccCcccccC-----------CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccC
Q 018244          210 ---RSYSTNLAFTPPEYLRT-----------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG  275 (359)
Q Consensus       210 ---~~~~~t~~y~aPE~~~~-----------~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  275 (359)
                         ....||+.|+|||++.+           ..++.++|||||||++|+|++|..||........   ....+.......
T Consensus       211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~---~~~~~~~~~~~~  287 (390)
T 2zmd_A          211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHEI  287 (390)
T ss_dssp             ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH---HHHHHHCTTSCC
T ss_pred             ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH---HHHHHhCccccC
Confidence               24568999999999875           3688999999999999999999999865321111   111222222222


Q ss_pred             CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .++...+.++.+|+.+||+.||++|||+.+++++
T Consensus       288 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          288 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            3344456789999999999999999999999975

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=5.1e-46  Score=366.36  Aligned_cols=247  Identities=19%  Similarity=0.264  Sum_probs=205.3

Q ss_pred             cCCCCCCcEEEEEEeC---CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCCC
Q 018244           64 EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs  139 (359)
                      .||+|+||.||+|.+.   ++..||||+++.... ...+.+.+|+++|+.++||||+++++++.. +..+|||||+.+|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            6899999999999853   466799999986532 346789999999999999999999999976 56999999999999


Q ss_pred             HhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-------Cc
Q 018244          140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-------SY  212 (359)
Q Consensus       140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-------~~  212 (359)
                      |.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......       ..
T Consensus       422 L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~  499 (613)
T 2ozo_A          422 LHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG  499 (613)
T ss_dssp             HHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------------
T ss_pred             HHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCC
Confidence            9999964 455799999999999999999999999 99999999999999999999999999998764332       12


Q ss_pred             CCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       213 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      .+++.|+|||++.+..++.++||||||+++|||++ |+.||............     ........+..++.++.+||.+
T Consensus       500 ~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i-----~~~~~~~~p~~~~~~l~~li~~  574 (613)
T 2ozo_A          500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI-----EQGKRMECPPECPPELYALMSD  574 (613)
T ss_dssp             --CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHH-----HTTCCCCCCTTCCHHHHHHHHH
T ss_pred             CCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH-----HcCCCCCCCCcCCHHHHHHHHH
Confidence            34578999999998899999999999999999998 99888765433322211     1122233456677899999999


Q ss_pred             hcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          292 CLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      ||+.||++|||+.++++.|+.+.....
T Consensus       575 cl~~dP~~RPs~~~l~~~L~~~~~~~~  601 (613)
T 2ozo_A          575 CWIYKWEDRPDFLTVEQRMRACYYSLA  601 (613)
T ss_dssp             TTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred             HcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence            999999999999999999998865443

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=7.7e-47  Score=346.13  Aligned_cols=257  Identities=18%  Similarity=0.287  Sum_probs=210.2

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeCC------CcEEEEEEeCCCCCc-hHHHHHHHHHHHhcC-CCcccccccceeeeCC
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGD  126 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~  126 (359)
                      ....|.+.+.||+|+||.||+|....      ...||+|.+...... ..+.+.+|+.+++.+ +||||+++++++...+
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  123 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG  123 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence            34678888999999999999998532      247999999865432 356689999999999 8999999999999999


Q ss_pred             cceEEEecCCCCCHhhhhhcCC------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCC
Q 018244          127 ERLLVAEYMPNDTLAKHLFHWE------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN  194 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~  194 (359)
                      ..++||||+++|+|.+++....            ...+++..++.++.|++.||.|||++ +++|+||||+|||++.++.
T Consensus       124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~~  202 (333)
T 2i1m_A          124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHV  202 (333)
T ss_dssp             SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGCEEEGGGE
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC-CcccCCcccceEEECCCCe
Confidence            9999999999999999986421            34689999999999999999999999 9999999999999999999


Q ss_pred             eEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhh
Q 018244          195 PRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQT  267 (359)
Q Consensus       195 ~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~  267 (359)
                      +||+|||++.......      ...+|+.|+|||++.+..++.++||||||+++|+|+| |..||...........    
T Consensus       203 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~----  278 (333)
T 2i1m_A          203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK----  278 (333)
T ss_dssp             EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHH----
T ss_pred             EEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHH----
Confidence            9999999998653322      2345678999999998889999999999999999999 8877765432221111    


Q ss_pred             hccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       268 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      ..........+...+..+.+++.+||+.||++|||+.++++.|+.+...
T Consensus       279 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  327 (333)
T 2i1m_A          279 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE  327 (333)
T ss_dssp             HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence            1111112223344567899999999999999999999999999987653

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=2e-46  Score=340.10  Aligned_cols=250  Identities=20%  Similarity=0.218  Sum_probs=199.7

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCch--HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ..|.+++.||+|+||+||+|... ++..||+|++.......  .+.+.+|+++++.++||||+++++++...+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            56889999999999999999964 58899999987654332  4567899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |+++++|.+++.  ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++......    
T Consensus        83 ~~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  159 (311)
T 4agu_A           83 YCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKH-NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY  159 (311)
T ss_dssp             CCSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred             eCCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccccc
Confidence            999999988876  456699999999999999999999999 9999999999999999999999999999875532    


Q ss_pred             CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhc-------------------
Q 018244          210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT-------------------  269 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~-------------------  269 (359)
                      ....+|..|+|||++.+ ..++.++||||||+++|+|++|..||.................                   
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (311)
T 4agu_A          160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV  239 (311)
T ss_dssp             ------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTC
T ss_pred             CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccC
Confidence            23467899999999976 5689999999999999999999999876533222111100000                   


Q ss_pred             -cccccCCC-----ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          270 -DSCLEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       270 -~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                       .+......     ....+.++.+|+.+||+.||++|||+++++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             CCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             cCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence             00000000     02356779999999999999999999999874

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.3e-46  Score=343.30  Aligned_cols=238  Identities=19%  Similarity=0.189  Sum_probs=202.3

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc--------hHHHHHHHHHHHhcCCCcccccccceeeeCCc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--------DARQFLEEARAVGQLRNRRLANLLGCCCEGDE  127 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  127 (359)
                      ..|.+++.||+|+||+||+|.. .++..||||++......        ....+.+|+.+|+.++||||+++++++...+.
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~  103 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF  103 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence            4688999999999999999984 56889999999765321        22356789999999999999999999999999


Q ss_pred             ceEEEecCCCC-CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          128 RLLVAEYMPND-TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       128 ~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      .++||||+.+| +|.+++.  ....+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||++...
T Consensus       104 ~~lv~e~~~~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~  180 (335)
T 3dls_A          104 FQLVMEKHGSGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLK-DIIHRDIKDENIVIAEDFTIKLIDFGSAAYL  180 (335)
T ss_dssp             EEEEEECCTTSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence            99999998776 9999986  455799999999999999999999999 9999999999999999999999999999876


Q ss_pred             CCCC---CcCCCccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHH
Q 018244          207 RDGR---SYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       207 ~~~~---~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                      ....   ...||+.|+|||++.+..+ +.++||||||+++|+|++|..||.....      .    ...  ....+...+
T Consensus       181 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~----~~~--~~~~~~~~~  248 (335)
T 3dls_A          181 ERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------T----VEA--AIHPPYLVS  248 (335)
T ss_dssp             CTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------G----TTT--CCCCSSCCC
T ss_pred             CCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------H----Hhh--ccCCCcccC
Confidence            5443   3468999999999998876 7899999999999999999998865211      0    000  011233456


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .++.+|+.+||+.||++|||+.+++++
T Consensus       249 ~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          249 KELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            789999999999999999999999985

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.7e-46  Score=345.45  Aligned_cols=250  Identities=19%  Similarity=0.143  Sum_probs=199.7

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCC-----CCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS-----AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      ..|++++.||+|+||+||+|.. .++..||+|++...     .....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  105 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICL  105 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEE
Confidence            3678888999999999999995 56889999998643     23345678999999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcC--------------------------------------CCCCCCHHHHHHHHHHHHHHHHHhh
Q 018244          131 VAEYMPNDTLAKHLFHW--------------------------------------ETQPMKWAMRLRVALHIAEALEYCT  172 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~--------------------------------------~~~~l~~~~~~~i~~qi~~~L~~LH  172 (359)
                      ||||+++|+|.+++...                                      ....+++..++.++.||+.||.|||
T Consensus       106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH  185 (345)
T 3hko_A          106 VMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH  185 (345)
T ss_dssp             EEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence            99999999999988421                                      0112367788999999999999999


Q ss_pred             cCCCcccccCCCCCeeeCCCC--CeEEeccCCcccCCC--------CCCcCCCccccCcccccC--CCCCCccchhhHHH
Q 018244          173 SKERALYHDLNAYRIVFDDDV--NPRLSCFGLMKNSRD--------GRSYSTNLAFTPPEYLRT--GRVTPESVMYSFGT  240 (359)
Q Consensus       173 ~~~~ivH~Dikp~NIll~~~~--~~kl~DFg~a~~~~~--------~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~  240 (359)
                      ++ +++|+||||+||+++.++  .+||+|||++.....        .....||+.|+|||.+.+  ..++.++||||||+
T Consensus       186 ~~-~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~  264 (345)
T 3hko_A          186 NQ-GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV  264 (345)
T ss_dssp             HT-TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHH
T ss_pred             HC-CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHH
Confidence            99 999999999999998766  899999999975432        134568999999999975  56899999999999


Q ss_pred             HHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       241 il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ++|+|++|+.||..................  .........+.++.+|+.+||+.||++|||+.+++++
T Consensus       265 il~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h  331 (345)
T 3hko_A          265 LLHLLLMGAVPFPGVNDADTISQVLNKKLC--FENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH  331 (345)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--TTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred             HHHHHHHCCCCCCCCChHHHHHHHHhcccc--cCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            999999999998765443322222111110  0111112356789999999999999999999999874

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=2.9e-46  Score=341.57  Aligned_cols=258  Identities=21%  Similarity=0.304  Sum_probs=209.1

Q ss_pred             CCcccccccCCCCCCcEEEEEEe------CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  128 (359)
                      ...|.+++.||+|+||.||+|..      .++..||||.+..... .....+.+|+.+++.++||||+++++++......
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            35788899999999999999983      2467899999975432 3355788999999999999999999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCCC-----CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC---CCCeEEecc
Q 018244          129 LLVAEYMPNDTLAKHLFHWET-----QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCF  200 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~---~~~~kl~DF  200 (359)
                      ++||||+++++|.+++.....     ..+++..++.++.|++.||.|||++ +++|+||||+|||++.   +..+||+||
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~i~H~dlkp~NIli~~~~~~~~~kl~Df  187 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF  187 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred             EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-CeecCcCCHhHEEEecCCCcceEEECcc
Confidence            999999999999999975432     4589999999999999999999999 9999999999999984   456999999


Q ss_pred             CCcccCCC------CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccc
Q 018244          201 GLMKNSRD------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCL  273 (359)
Q Consensus       201 g~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~  273 (359)
                      |++.....      .....+|+.|+|||.+.+..++.++||||||+++|+|+| |..||..............     ..
T Consensus       188 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~-----~~  262 (327)
T 2yfx_A          188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS-----GG  262 (327)
T ss_dssp             HHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT-----TC
T ss_pred             ccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhc-----CC
Confidence            99875322      223456889999999998889999999999999999998 8888766543332221111     11


Q ss_pred             cCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccC
Q 018244          274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV  319 (359)
Q Consensus       274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~  319 (359)
                      ....+...+..+.+++.+||+.||++|||+.++++.|+.+......
T Consensus       263 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~~  308 (327)
T 2yfx_A          263 RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV  308 (327)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHHH
Confidence            2223455677899999999999999999999999999998765443

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=8e-47  Score=344.90  Aligned_cols=250  Identities=18%  Similarity=0.254  Sum_probs=197.1

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCch-HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ..|.+++.||+|+||+||+|... ++..||+|++....... ...+.+|+++++.++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            57889999999999999999954 68899999997543221 12345799999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----C
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~  210 (359)
                      +++ +|.+++.. ....+++..+..++.|++.||.|||+. |++||||||+|||++.++.+||+|||++......    .
T Consensus        82 ~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~  158 (324)
T 3mtl_A           82 LDK-DLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQ-KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYD  158 (324)
T ss_dssp             CSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred             ccc-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCcCHHHEEECCCCCEEEccCcccccccCCccccc
Confidence            975 89998865 455799999999999999999999999 9999999999999999999999999998765432    2


Q ss_pred             CcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccccc---------------
Q 018244          211 SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE---------------  274 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------------  274 (359)
                      ...+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||..................+...               
T Consensus       159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  238 (324)
T 3mtl_A          159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYN  238 (324)
T ss_dssp             ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTC
T ss_pred             cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccc
Confidence            3467899999999886 568999999999999999999999987754433222211111100000               


Q ss_pred             --C-------CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          275 --G-------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       275 --~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                        .       ......+.++.+|+.+||+.||++|||+.+++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  282 (324)
T 3mtl_A          239 YPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH  282 (324)
T ss_dssp             CCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             cccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence              0       0012346789999999999999999999999974

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=3.3e-46  Score=335.57  Aligned_cols=253  Identities=21%  Similarity=0.247  Sum_probs=207.8

Q ss_pred             CCcccccc-cCCCCCCcEEEEEEe---CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           56 FAMENIVS-EHGEKAPNVVYKGKL---ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        56 ~~~~~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      ...|.+.+ .||+|+||+||+|..   .++..||||++......  ..+.+.+|+++++.++||||+++++++ ..+..+
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~   93 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM   93 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence            35677777 899999999999953   34678999999865322  256789999999999999999999999 667889


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +||||+++++|.+++..  ...+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++......
T Consensus        94 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  170 (291)
T 1xbb_A           94 LVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD  170 (291)
T ss_dssp             EEEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred             EEEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhC-CeEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence            99999999999999974  45699999999999999999999999 9999999999999999999999999999876543


Q ss_pred             C-------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHH
Q 018244          210 R-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE  281 (359)
Q Consensus       210 ~-------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (359)
                      .       ...++..|+|||.+.+..++.++||||||+++|+|++ |..||.............     .......+...
T Consensus       171 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~  245 (291)
T 1xbb_A          171 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-----KGERMGCPAGC  245 (291)
T ss_dssp             CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-----TTCCCCCCTTC
T ss_pred             CCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-----cCCCCCCCCCC
Confidence            2       2234678999999988889999999999999999999 998887654333222111     11122344566


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 018244          282 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT  317 (359)
Q Consensus       282 ~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~  317 (359)
                      +..+.+++.+||+.||++|||+.++++.|+.+....
T Consensus       246 ~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~  281 (291)
T 1xbb_A          246 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV  281 (291)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence            788999999999999999999999999999986543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=1.1e-46  Score=344.16  Aligned_cols=241  Identities=16%  Similarity=0.191  Sum_probs=180.0

Q ss_pred             ccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEEEecCCCCCH
Q 018244           63 SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~gsL  140 (359)
                      +.||+|+||+||+|.. .++..||||++...   ....+.+|+.+++.+. ||||+++++++.+....++||||+++|+|
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   93 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL   93 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence            6789999999999995 46889999999753   3456788999999997 99999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC---CeEEeccCCcccCCCC----CCcC
Q 018244          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFGLMKNSRDG----RSYS  213 (359)
Q Consensus       141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~---~~kl~DFg~a~~~~~~----~~~~  213 (359)
                      .+++..  ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++   .+||+|||+++.....    ....
T Consensus        94 ~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  170 (325)
T 3kn6_A           94 FERIKK--KKHFSETEASYIMRKLVSAVSHMHDV-GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC  170 (325)
T ss_dssp             HHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred             HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccC
Confidence            999974  46799999999999999999999999 999999999999997665   7999999999865443    2445


Q ss_pred             CCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhh---hhhhhhccccccCC--CChHHHHHHHHH
Q 018244          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---RNIQTLTDSCLEGQ--FSSDEGTELVRL  288 (359)
Q Consensus       214 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~l~~l  288 (359)
                      +|+.|+|||++.+..++.++||||||+++|+|++|..||..........   .....+........  .....++++.+|
T Consensus       171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  250 (325)
T 3kn6_A          171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDL  250 (325)
T ss_dssp             -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHH
T ss_pred             CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHH
Confidence            7899999999998899999999999999999999999987543211000   00111111110000  012357789999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+||+.||++|||+.+++++
T Consensus       251 i~~~L~~dP~~Rpt~~ell~h  271 (325)
T 3kn6_A          251 IQGLLTVDPNKRLKMSGLRYN  271 (325)
T ss_dssp             HHHHHCCCTTTCCCTTTSTTC
T ss_pred             HHHHCCCChhHCCCHHHHhcC
Confidence            999999999999999999864

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=4.7e-46  Score=333.70  Aligned_cols=247  Identities=15%  Similarity=0.187  Sum_probs=201.0

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .|.+.+.||+|+||+||+|.. .++..+|+|.+.... ....+.+.+|+++++.++||||+++++++.+....++||||+
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~  102 (285)
T 3is5_A           23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETC  102 (285)
T ss_dssp             HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeC
Confidence            678889999999999999995 568899999997653 234677899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee---CCCCCeEEeccCCcccCCCC-
Q 018244          136 PNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       136 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll---~~~~~~kl~DFg~a~~~~~~-  209 (359)
                      ++|+|.+++...  ....+++..++.++.|++.||.|||+. +++|+||||+||++   +.++.+||+|||++...... 
T Consensus       103 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~  181 (285)
T 3is5_A          103 EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ-HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE  181 (285)
T ss_dssp             SCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred             CCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence            999999988642  246799999999999999999999999 99999999999999   45688999999999765433 


Q ss_pred             --CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       210 --~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                        ....+|+.|+|||.+. ..++.++||||||+++|+|++|..||...................   .......++++.+
T Consensus       182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  257 (285)
T 3is5_A          182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNY---AVECRPLTPQAVD  257 (285)
T ss_dssp             -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC---CC--CCCCHHHHH
T ss_pred             cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCccc---ccccCcCCHHHHH
Confidence              3456899999999986 568999999999999999999999987765444332222111110   0111224678999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~  309 (359)
                      |+.+||+.||++|||+.+++++
T Consensus       258 li~~~L~~dP~~Rps~~e~l~h  279 (285)
T 3is5_A          258 LLKQMLTKDPERRPSAAQVLHH  279 (285)
T ss_dssp             HHHHHTCSCTTTSCCHHHHHTS
T ss_pred             HHHHHccCChhhCcCHHHHhcC
Confidence            9999999999999999999863

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=1.7e-46  Score=343.42  Aligned_cols=252  Identities=17%  Similarity=0.220  Sum_probs=195.7

Q ss_pred             cCCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCch--HHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        54 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      ..+..|.+++.||+|+||+||+|.. .++..||||++.......  .+.+.+|+++++.++||||+++++++......++
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  110 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL  110 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence            3456899999999999999999984 578899999997654322  3457899999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC-----CCCCeEEeccCCccc
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-----DDVNPRLSCFGLMKN  205 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~-----~~~~~kl~DFg~a~~  205 (359)
                      ||||+.+ +|.+++..  ...+++..+..++.||+.||.|||++ +|+||||||+|||++     .++.+||+|||++..
T Consensus       111 v~e~~~~-~L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~  186 (329)
T 3gbz_A          111 IFEYAEN-DLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA  186 (329)
T ss_dssp             EEECCSE-EHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred             EEecCCC-CHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence            9999975 99999973  45699999999999999999999999 999999999999994     455699999999976


Q ss_pred             CCCC----CCcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccc--------
Q 018244          206 SRDG----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC--------  272 (359)
Q Consensus       206 ~~~~----~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~--------  272 (359)
                      ....    ....+|+.|+|||++.+.. ++.++||||||+++|+|++|..||..................+.        
T Consensus       187 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (329)
T 3gbz_A          187 FGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT  266 (329)
T ss_dssp             HC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred             cCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhh
Confidence            5422    3346789999999998754 89999999999999999999999876543322221111110000        


Q ss_pred             ----ccCC------------CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          273 ----LEGQ------------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       273 ----~~~~------------~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                          ....            .....+.++.+|+.+||+.||++|||+.+++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  319 (329)
T 3gbz_A          267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH  319 (329)
T ss_dssp             GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence                0000            011245789999999999999999999999863

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=3.6e-46  Score=370.86  Aligned_cols=245  Identities=19%  Similarity=0.234  Sum_probs=209.2

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcC-CCcccccccceeeeCCcce
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  129 (359)
                      ...+|++++.||+|+||.||+|.. .+++.||||++....   ....+.+..|..+|..+ +||||+++++++.+.+.+|
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            457789999999999999999995 468899999997531   23356678899999988 6999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC-
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-  208 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~-  208 (359)
                      |||||+++|+|.+++..  ...+++..+..|+.||+.||.|||++ +|+||||||+||||+.++.+||+|||+++.... 
T Consensus       419 lV~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~  495 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD  495 (674)
T ss_dssp             EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred             EEEeCcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence            99999999999999974  35699999999999999999999999 999999999999999999999999999986322 


Q ss_pred             ---CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          209 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       209 ---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                         .....||+.|+|||++.+..++.++||||||+++|||++|..||...............      ...++...+.++
T Consensus       496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~  569 (674)
T 3pfq_A          496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEA  569 (674)
T ss_dssp             TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSS------CCCCCTTSCHHH
T ss_pred             CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHH
Confidence               23457899999999999999999999999999999999999999876554443333221      123456678899


Q ss_pred             HHHHHHhcccCCCCCCCH-----HHHHH
Q 018244          286 VRLASRCLQYEPRERPNP-----RSLVT  308 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~-----~~il~  308 (359)
                      .+||.+||+.||++||++     ++|++
T Consensus       570 ~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          570 VAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             HHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             HHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence            999999999999999997     66665

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.3e-45  Score=332.08  Aligned_cols=256  Identities=15%  Similarity=0.149  Sum_probs=207.7

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCccccccccee-eeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCC-CEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~  134 (359)
                      ..|.+.+.||+|+||.||+|.. .+++.||||++.....  ...+.+|+.+++.++|++++..+.++ ......++||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~   86 (296)
T 3uzp_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   86 (296)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence            4688889999999999999995 6789999999876543  24588999999999988877666655 556778999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee---CCCCCeEEeccCCcccCCCC--
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG--  209 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll---~~~~~~kl~DFg~a~~~~~~--  209 (359)
                      + +++|.+++.. ....+++..++.++.|++.||.|||++ +++||||||+||++   +.++.+||+|||++......  
T Consensus        87 ~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~  163 (296)
T 3uzp_A           87 L-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  163 (296)
T ss_dssp             C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             c-CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence            9 8899999964 345799999999999999999999999 99999999999999   47899999999999865433  


Q ss_pred             ---------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchh-------HHHhhhhhhhhccccc
Q 018244          210 ---------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-------DLIRDRNIQTLTDSCL  273 (359)
Q Consensus       210 ---------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~-------~~~~~~~~~~~~~~~~  273 (359)
                               ....||+.|+|||.+.+..++.++||||||+++|+|++|+.||.....       ............ .  
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~--  240 (296)
T 3uzp_A          164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-E--  240 (296)
T ss_dssp             CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-H--
T ss_pred             ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch-H--
Confidence                     344688999999999998999999999999999999999999865321       111111111000 0  


Q ss_pred             cCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccCCcc
Q 018244          274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVSCF  322 (359)
Q Consensus       274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~~~  322 (359)
                        ......++++.+++.+||+.||++|||+.++++.|+.+......+..
T Consensus       241 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~  287 (296)
T 3uzp_A          241 --VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYD  287 (296)
T ss_dssp             --HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSS
T ss_pred             --HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCccc
Confidence              01133457899999999999999999999999999999877665543

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=2e-46  Score=361.96  Aligned_cols=251  Identities=17%  Similarity=0.220  Sum_probs=207.4

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      ....|.+++.||+|+||.||+|.. .+|+.||+|++.....   .....+.+|+++|+.++||||+++++++.+...+|+
T Consensus       183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  262 (543)
T 3c4z_A          183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL  262 (543)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence            446788888999999999999996 4689999999975321   234568899999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          131 VAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      ||||+++|+|.+++....  ...+++..+..++.||+.||.|||++ +|+||||||+|||++.+|.+||+|||+++....
T Consensus       263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~-gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~  341 (543)
T 3c4z_A          263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA  341 (543)
T ss_dssp             EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc-CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence            999999999999986533  45799999999999999999999999 999999999999999999999999999987654


Q ss_pred             CC----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHH
Q 018244          209 GR----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE  284 (359)
Q Consensus       209 ~~----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (359)
                      ..    ...||+.|+|||++.+..++.++|||||||++|||++|..||...............+...  ...++...+.+
T Consensus       342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~  419 (543)
T 3c4z_A          342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ--AVTYPDKFSPA  419 (543)
T ss_dssp             TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC--CCCCCTTSCHH
T ss_pred             CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc--ccCCCcccCHH
Confidence            32    3478999999999999899999999999999999999999987642110011111111111  12345667789


Q ss_pred             HHHHHHHhcccCCCCCCCH-----HHHHH
Q 018244          285 LVRLASRCLQYEPRERPNP-----RSLVT  308 (359)
Q Consensus       285 l~~li~~cl~~dp~~Rps~-----~~il~  308 (359)
                      +.+|+.+||+.||++||++     .++++
T Consensus       420 ~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          420 SKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             HHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             HHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence            9999999999999999975     55654

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=4.3e-46  Score=341.15  Aligned_cols=254  Identities=17%  Similarity=0.181  Sum_probs=192.7

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-Ccccccccceee--------eCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCC--------EGD  126 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~--------~~~  126 (359)
                      ..|++.+.||+|+||.||+|.. .++..||||++........+.+.+|+.++..+. ||||+++++++.        ...
T Consensus        28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~  107 (337)
T 3ll6_A           28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA  107 (337)
T ss_dssp             EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred             ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence            3688899999999999999995 478899999997665555677899999999996 999999999984        334


Q ss_pred             cceEEEecCCCCCHhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccCCCCCeeeCCCCCeEEeccCCc
Q 018244          127 ERLLVAEYMPNDTLAKHLFHW-ETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~--ivH~Dikp~NIll~~~~~~kl~DFg~a  203 (359)
                      ..++||||+. |+|.+++... ....+++..++.++.||+.||.|||+. +  ++|+||||+|||++.++.+||+|||++
T Consensus       108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~  185 (337)
T 3ll6_A          108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA  185 (337)
T ss_dssp             EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred             eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCCCEEEecCccc
Confidence            5799999996 6899988642 345699999999999999999999999 8  999999999999999999999999999


Q ss_pred             ccCCCCC----------------CcCCCccccCcccc---cCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhh
Q 018244          204 KNSRDGR----------------SYSTNLAFTPPEYL---RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN  264 (359)
Q Consensus       204 ~~~~~~~----------------~~~~t~~y~aPE~~---~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~  264 (359)
                      .......                ...+|+.|+|||++   .+..++.++||||||+++|+|++|..||............
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~  265 (337)
T 3ll6_A          186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGK  265 (337)
T ss_dssp             BCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred             eeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcCc
Confidence            8754322                23478999999998   4566889999999999999999999988654322211111


Q ss_pred             hhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccCC
Q 018244          265 IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVS  320 (359)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~  320 (359)
                              .........+..+.+|+.+||+.||++|||+.++++.|+.+.......
T Consensus       266 --------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~  313 (337)
T 3ll6_A          266 --------YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN  313 (337)
T ss_dssp             --------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCC
T ss_pred             --------ccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCC
Confidence                    111112333456899999999999999999999999999987755443

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=2.1e-46  Score=344.38  Aligned_cols=244  Identities=19%  Similarity=0.233  Sum_probs=199.4

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ..|.+++.||+|+||.||+|.. .++..||||++......    ..+|++++.++ +||||+++++++.+....++||||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~   97 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL   97 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence            4588999999999999999995 46889999999765432    34688888887 799999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC----CCeEEeccCCcccCCCC-
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD----VNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~----~~~kl~DFg~a~~~~~~-  209 (359)
                      +++|+|.+++.  ....+++..+..++.||+.||.|||++ ||+||||||+|||+.++    +.+||+|||+++..... 
T Consensus        98 ~~gg~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~-givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~  174 (342)
T 2qr7_A           98 MKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQ-GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN  174 (342)
T ss_dssp             CCSCBHHHHHH--TCTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred             CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence            99999999997  456799999999999999999999999 99999999999998543    34999999999865443 


Q ss_pred             ---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcch---hHHHhhhhhhhhccccccCCCChHHHH
Q 018244          210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       210 ---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                         ....+|+.|+|||++.+..++.++||||||+++|+|++|..||....   ............  ...........+.
T Consensus       175 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~  252 (342)
T 2qr7_A          175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGK--FSLSGGYWNSVSD  252 (342)
T ss_dssp             CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCC--CCCCSTTTTTSCH
T ss_pred             CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCC--cccCccccccCCH
Confidence               24567899999999988779999999999999999999999987531   111111111100  0111122345678


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ++.+|+.+||+.||++|||+.+++++
T Consensus       253 ~~~~li~~~L~~dP~~R~t~~~il~h  278 (342)
T 2qr7_A          253 TAKDLVSKMLHVDPHQRLTAALVLRH  278 (342)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            89999999999999999999999875

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=1.2e-45  Score=355.11  Aligned_cols=247  Identities=19%  Similarity=0.189  Sum_probs=204.9

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ..|++++.||+|+||+||+|.. .++..||||++....  ......+.+|+++|+.++||||+++++++.+....++|||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            3688999999999999999995 478899999986432  2345678999999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC---CCCCeEEeccCCcccCCCC-
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~---~~~~~kl~DFg~a~~~~~~-  209 (359)
                      |+.+|+|.+++..  ...+++..+..++.||+.||.|||++ +|+||||||+|||++   .++.+||+|||++...... 
T Consensus       102 ~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~  178 (486)
T 3mwu_A          102 LYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT  178 (486)
T ss_dssp             CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred             cCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC
Confidence            9999999998864  35699999999999999999999999 999999999999995   4567999999999865543 


Q ss_pred             --CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       210 --~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                        ....||+.|+|||++.+ .++.++||||||+++|+|++|..||...................  ........+.++.+
T Consensus       179 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~  255 (486)
T 3mwu_A          179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF--DLPQWRTISDDAKD  255 (486)
T ss_dssp             ---CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCS--CSGGGGGSCHHHHH
T ss_pred             ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC--CCcccCCCCHHHHH
Confidence              34568999999999875 59999999999999999999999987764433322221111100  00112345788999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~  309 (359)
                      |+.+||+.||++|||+.+++++
T Consensus       256 li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          256 LIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHC
T ss_pred             HHHHHcCCChhhCcCHHHHhcC
Confidence            9999999999999999999986

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=6.1e-46  Score=337.42  Aligned_cols=257  Identities=20%  Similarity=0.279  Sum_probs=209.4

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe------CCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcC-CCcccccccceeeeCC
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGD  126 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~  126 (359)
                      ....|.+.+.||+|+||+||+|..      .++..||||++...... ..+.+.+|+.++..+ +||||+++++++...+
T Consensus        25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  104 (316)
T 2xir_A           25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG  104 (316)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC
Confidence            345788999999999999999973      34678999999865433 345688999999999 6999999999987754


Q ss_pred             -cceEEEecCCCCCHhhhhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC
Q 018244          127 -ERLLVAEYMPNDTLAKHLFHWET--------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD  191 (359)
Q Consensus       127 -~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~  191 (359)
                       ..++||||+++|+|.+++.....              ..+++..++.++.|++.||.|||+. +++|+||||+||+++.
T Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dikp~Nil~~~  183 (316)
T 2xir_A          105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSE  183 (316)
T ss_dssp             SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECG
T ss_pred             CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC-CcccccCccceEEECC
Confidence             48999999999999999975322              1288999999999999999999999 9999999999999999


Q ss_pred             CCCeEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhh
Q 018244          192 DVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRN  264 (359)
Q Consensus       192 ~~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~  264 (359)
                      ++.+||+|||++.......      ...+|+.|+|||++.+..++.++||||||+++|+|+| |..||............
T Consensus       184 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~  263 (316)
T 2xir_A          184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR  263 (316)
T ss_dssp             GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHH
T ss_pred             CCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHH
Confidence            9999999999998654332      2345788999999998899999999999999999998 88887654322111111


Q ss_pred             hhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          265 IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      ..    .......+...++++.+++.+||+.||++|||+.++++.|+.+.+.
T Consensus       264 ~~----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  311 (316)
T 2xir_A          264 LK----EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  311 (316)
T ss_dssp             HH----HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hc----cCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            11    1111223445677899999999999999999999999999988653

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=1.8e-45  Score=339.59  Aligned_cols=251  Identities=16%  Similarity=0.197  Sum_probs=200.1

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeC------
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG------  125 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------  125 (359)
                      ....|.+++.||+|+||+||+|.. .++..||||++......  ....+.+|+++++.++||||+++++++...      
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   94 (351)
T 3mi9_A           15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR   94 (351)
T ss_dssp             BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred             cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence            356899999999999999999996 57899999998754322  245678999999999999999999999873      


Q ss_pred             --CcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCc
Q 018244          126 --DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (359)
Q Consensus       126 --~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a  203 (359)
                        +..++||||+.+ +|.+.+.. ....+++..+..++.|++.||.|||++ ||+||||||+|||++.++.+||+|||++
T Consensus        95 ~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  171 (351)
T 3mi9_A           95 CKGSIYLVFDFCEH-DLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLA  171 (351)
T ss_dssp             --CEEEEEEECCSE-EHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             CCceEEEEEeccCC-CHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence              468999999976 78887754 445699999999999999999999999 9999999999999999999999999999


Q ss_pred             ccCCCC--------CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccccc
Q 018244          204 KNSRDG--------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE  274 (359)
Q Consensus       204 ~~~~~~--------~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  274 (359)
                      ......        ....||+.|+|||++.+. .++.++||||||+++|+|++|..||................... ..
T Consensus       172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~  250 (351)
T 3mi9_A          172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSI-TP  250 (351)
T ss_dssp             EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC-CT
T ss_pred             ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC-Ch
Confidence            765421        234578999999998764 58999999999999999999999887654332221111100000 00


Q ss_pred             CCCC----------------------h-----HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          275 GQFS----------------------S-----DEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       275 ~~~~----------------------~-----~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ..++                      .     ..++.+.+|+.+||+.||++|||+.+++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence            0000                      0     014678999999999999999999999875

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=1.5e-45  Score=331.66  Aligned_cols=259  Identities=15%  Similarity=0.148  Sum_probs=204.0

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCccccccccee-eeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCC-CEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~  134 (359)
                      ..|.+.+.||+|+||+||+|.. .++..||||++.....  ...+.+|+.+++.++|++++..+..+ ...+..++||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~   86 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   86 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence            4578888899999999999995 6788999998765432  23478899999999988877776655 567788999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee---CCCCCeEEeccCCcccCCCC--
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG--  209 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll---~~~~~~kl~DFg~a~~~~~~--  209 (359)
                      + +++|.+++.. ....+++..+..++.|++.||.|||++ +++||||||+|||+   +.++.+||+|||++......  
T Consensus        87 ~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~  163 (296)
T 4hgt_A           87 L-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  163 (296)
T ss_dssp             C-CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             c-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence            9 8899999864 345799999999999999999999999 99999999999999   78899999999999865432  


Q ss_pred             ---------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccC---CC
Q 018244          210 ---------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG---QF  277 (359)
Q Consensus       210 ---------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~  277 (359)
                               ....+|+.|+|||.+.+..++.++||||||+++|+|++|+.||.......... ............   ..
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~  242 (296)
T 4hgt_A          164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ-KYERISEKKMSTPIEVL  242 (296)
T ss_dssp             CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS-HHHHHHHHHHHSCHHHH
T ss_pred             CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh-hhhhhhcccccchhhhh
Confidence                     23468899999999999899999999999999999999999986532110000 000000000000   01


Q ss_pred             ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccCCc
Q 018244          278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVSC  321 (359)
Q Consensus       278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~~  321 (359)
                      ....+.++.+++.+||+.||++|||+.++++.|+.+......+.
T Consensus       243 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~  286 (296)
T 4hgt_A          243 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSY  286 (296)
T ss_dssp             TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCT
T ss_pred             hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCc
Confidence            12345789999999999999999999999999999987665543

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=4.5e-46  Score=344.75  Aligned_cols=252  Identities=17%  Similarity=0.224  Sum_probs=205.0

Q ss_pred             CCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ...|.+++.||+|+||+||+|... ++..||+|++...... ..+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            356889999999999999999954 6889999999865433 34678999999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC--CCCC
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRS  211 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~--~~~~  211 (359)
                      |+++++|.+++..  ...+++..+..++.|++.||.|||+..+++|+||||+||+++.++.+||+|||++....  ....
T Consensus       112 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  189 (360)
T 3eqc_A          112 HMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS  189 (360)
T ss_dssp             CCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred             CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccC
Confidence            9999999999974  34689999999999999999999984389999999999999999999999999986532  2345


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhh---------------------------
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN---------------------------  264 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~---------------------------  264 (359)
                      ..||+.|+|||++.+..++.++||||||+++|+|++|+.||............                           
T Consensus       190 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (360)
T 3eqc_A          190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGM  269 (360)
T ss_dssp             -CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------------
T ss_pred             CCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccccc
Confidence            57899999999999989999999999999999999999998754332221100                           


Q ss_pred             -----------hhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          265 -----------IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       265 -----------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                 .................+.++.+|+.+||+.||++|||+.+++++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  325 (360)
T 3eqc_A          270 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  325 (360)
T ss_dssp             ----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             CCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence                       000000001111122356789999999999999999999999975

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=1.7e-45  Score=332.74  Aligned_cols=245  Identities=16%  Similarity=0.249  Sum_probs=207.8

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .|.+++.||+|+||.||+|.. .++..||+|++.... ....+.+.+|+.+++.++||||+++++++......++||||+
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  102 (303)
T 3a7i_A           23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL  102 (303)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence            478888999999999999985 568899999997654 234677899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CC
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~  211 (359)
                      ++++|.+++   ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++......    ..
T Consensus       103 ~~~~L~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  178 (303)
T 3a7i_A          103 GGGSALDLL---EPGPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT  178 (303)
T ss_dssp             TTEEHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred             CCCcHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence            999999998   446799999999999999999999999 9999999999999999999999999999765443    34


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ..+|+.|+|||.+.+..++.++||||||+++|+|++|..||............     ........+...+..+.+|+.+
T Consensus       179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~li~~  253 (303)
T 3a7i_A          179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI-----PKNNPPTLEGNYSKPLKEFVEA  253 (303)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-----HHSCCCCCCSSCCHHHHHHHHH
T ss_pred             cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHh-----hcCCCCCCccccCHHHHHHHHH
Confidence            56789999999999889999999999999999999999988654332221111     1111222344566789999999


Q ss_pred             hcccCCCCCCCHHHHHHHHH
Q 018244          292 CLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~L~  311 (359)
                      ||+.||++|||+.+++++.-
T Consensus       254 ~l~~dp~~Rps~~~ll~~~~  273 (303)
T 3a7i_A          254 CLNKEPSFRPTAKELLKHKF  273 (303)
T ss_dssp             HCCSSGGGSCCHHHHTTCHH
T ss_pred             HcCCChhhCcCHHHHhhChh
Confidence            99999999999999998643

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=3.5e-46  Score=341.65  Aligned_cols=252  Identities=17%  Similarity=0.263  Sum_probs=201.3

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCch--HHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      .+..|++++.||+|+||.||+|... ++..||||++.......  .+.+.+|+.+++.++||||+++++++......++|
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  102 (331)
T 4aaa_A           23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV  102 (331)
T ss_dssp             CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence            4567999999999999999999964 58899999986554332  44578999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--  209 (359)
                      |||+++++|.+++.  ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++......  
T Consensus       103 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  179 (331)
T 4aaa_A          103 FEFVDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSH-NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE  179 (331)
T ss_dssp             EECCSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred             EecCCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHC-CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence            99999998888765  455699999999999999999999999 9999999999999999999999999999765432  


Q ss_pred             --CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhh-------------------
Q 018244          210 --RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT-------------------  267 (359)
Q Consensus       210 --~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~-------------------  267 (359)
                        ....+|..|+|||.+.+. .++.++||||||+++|+|++|+.||...............                   
T Consensus       180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (331)
T 4aaa_A          180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA  259 (331)
T ss_dssp             ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred             ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence              345688999999999875 6899999999999999999999998765332211111000                   


Q ss_pred             -hccccccCCC-----ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          268 -LTDSCLEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       268 -~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                       ...+......     ....+.++.+|+.+||+.||++|||+.+++++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  307 (331)
T 4aaa_A          260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH  307 (331)
T ss_dssp             TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence             0000000000     12356789999999999999999999999874

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=2.8e-46  Score=333.72  Aligned_cols=252  Identities=16%  Similarity=0.210  Sum_probs=206.6

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeee--CCcce
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERL  129 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~  129 (359)
                      ....|++++.||+|+||.||+|.. .+++.||+|.+.....  ...+.+.+|+.+++.++||||+++++++..  ....+
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   83 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY   83 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred             chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence            456789999999999999999995 4688999999976543  234568899999999999999999998854  56789


Q ss_pred             EEEecCCCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCC-----cccccCCCCCeeeCCCCCeEEeccCC
Q 018244          130 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKER-----ALYHDLNAYRIVFDDDVNPRLSCFGL  202 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~-----ivH~Dikp~NIll~~~~~~kl~DFg~  202 (359)
                      +||||+++++|.+++...  ....+++..++.++.|++.||.|||+. +     ++|+||||+||+++.++.+||+|||+
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~  162 (279)
T 2w5a_A           84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR-SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL  162 (279)
T ss_dssp             EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH-C------CCCCCSGGGEEECSSSCEEECCCCH
T ss_pred             EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc-cCCCCeeEEeccchhhEEEcCCCCEEEecCch
Confidence            999999999999999642  234599999999999999999999998 8     99999999999999999999999999


Q ss_pred             cccCCCCC----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCC
Q 018244          203 MKNSRDGR----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS  278 (359)
Q Consensus       203 a~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (359)
                      +.......    ...+|..|+|||.+.+..++.++||||||+++|+|++|..||...............     .....+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~  237 (279)
T 2w5a_A          163 ARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-----KFRRIP  237 (279)
T ss_dssp             HHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-----CCCCCC
T ss_pred             heeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhc-----ccccCC
Confidence            88765443    235789999999999888999999999999999999999988765433222221111     112334


Q ss_pred             hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 018244          279 SDEGTELVRLASRCLQYEPRERPNPRSLVTALVT  312 (359)
Q Consensus       279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~  312 (359)
                      ...+.++.+++.+||+.||++|||+.++++.+..
T Consensus       238 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          238 YRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  271 (279)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence            5567889999999999999999999999986543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=5.9e-46  Score=335.46  Aligned_cols=248  Identities=18%  Similarity=0.221  Sum_probs=200.8

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      ..|++++.||+|+||.||+|... ++..||+|++........+.+.+|+++++.++||||+++++++...+..++||||+
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   98 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC   98 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred             cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence            46889999999999999999964 58899999998776666788999999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC----CCCCC
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS----RDGRS  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~----~~~~~  211 (359)
                      ++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++...    .....
T Consensus        99 ~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  176 (302)
T 2j7t_A           99 PGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSK-RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS  176 (302)
T ss_dssp             TTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC---
T ss_pred             CCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHHHEEECCCCCEEEEECCCCcccccccccccc
Confidence            99999998864 345699999999999999999999999 9999999999999999999999999987532    12334


Q ss_pred             cCCCccccCcccc-----cCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          212 YSTNLAFTPPEYL-----RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       212 ~~~t~~y~aPE~~-----~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                      ..+|..|+|||++     .+..++.++||||||+++|+|++|..|+...............   .......+...+.++.
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~  253 (302)
T 2j7t_A          177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---DPPTLLTPSKWSVEFR  253 (302)
T ss_dssp             --CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS---CCCCCSSGGGSCHHHH
T ss_pred             ccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhcc---CCcccCCccccCHHHH
Confidence            5689999999998     3567899999999999999999999988754332221111111   0011112345677899


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHH
Q 018244          287 RLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +++.+||+.||++|||+.+++++
T Consensus       254 ~li~~~l~~dp~~Rps~~~ll~h  276 (302)
T 2j7t_A          254 DFLKIALDKNPETRPSAAQLLEH  276 (302)
T ss_dssp             HHHHHHSCSCTTTSCCHHHHTTS
T ss_pred             HHHHHHcccChhhCCCHHHHhcC
Confidence            99999999999999999998863

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=8.6e-46  Score=356.88  Aligned_cols=246  Identities=15%  Similarity=0.183  Sum_probs=200.7

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .|++++.||+|+||+||+|... ++..||+|++....  ......+.+|+.+++.++||||+++++++.+....++||||
T Consensus        38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~  117 (494)
T 3lij_A           38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC  117 (494)
T ss_dssp             HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence            5889999999999999999954 68899999997643  22356789999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC---CCeEEeccCCcccCCCC--
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDG--  209 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~---~~~kl~DFg~a~~~~~~--  209 (359)
                      +.+|+|.+++..  ...+++..+..++.||+.||.|||++ +|+||||||+|||++..   +.+||+|||++......  
T Consensus       118 ~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~  194 (494)
T 3lij_A          118 YKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKH-NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK  194 (494)
T ss_dssp             CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred             CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence            999999998863  45699999999999999999999999 99999999999999764   55999999999876543  


Q ss_pred             -CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                       ....||+.|+|||++. ..++.++||||||+++|+|++|..||...................  ........+..+.+|
T Consensus       195 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~l  271 (494)
T 3lij_A          195 MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTF--DSPEWKNVSEGAKDL  271 (494)
T ss_dssp             BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC--CSGGGTTSCHHHHHH
T ss_pred             ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC--CchhcccCCHHHHHH
Confidence             3456899999999986 579999999999999999999999998765443332222111110  001113456789999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+||+.||.+|||+.+++++
T Consensus       272 i~~~L~~dp~~R~s~~e~l~h  292 (494)
T 3lij_A          272 IKQMLQFDSQRRISAQQALEH  292 (494)
T ss_dssp             HHHHTCSSTTTSCCHHHHHTC
T ss_pred             HHHHCCCChhhCccHHHHhcC
Confidence            999999999999999999965

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=5.5e-46  Score=357.49  Aligned_cols=247  Identities=18%  Similarity=0.162  Sum_probs=206.9

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ..|++.+.||+|+||+||+|... ++..||||++....   ....+.+.+|+.+++.++||||+++++++......++||
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            35888999999999999999954 78899999996543   234677899999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee---CCCCCeEEeccCCcccCCCC
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll---~~~~~~kl~DFg~a~~~~~~  209 (359)
                      ||+.+|+|.+++.  ....+++..+..++.||+.||.|||++ +|+||||||+|||+   +.++.+||+|||++......
T Consensus       106 e~~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~  182 (484)
T 3nyv_A          106 EVYTGGELFDEII--SRKRFSEVDAARIIRQVLSGITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS  182 (484)
T ss_dssp             CCCCSCBHHHHHH--TCSCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCC
T ss_pred             ecCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccc
Confidence            9999999999987  456799999999999999999999999 99999999999999   46789999999999876544


Q ss_pred             C---CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          210 R---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       210 ~---~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                      .   ...||+.|+|||++.+ .++.++||||||+++|+|++|..||..................  .........++++.
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~  259 (484)
T 3nyv_A          183 KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT--FELPQWKKVSESAK  259 (484)
T ss_dssp             CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCSGGGGGSCHHHH
T ss_pred             cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--CCCcccccCCHHHH
Confidence            3   3468999999999875 6999999999999999999999999765443332222111111  00111234678899


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHH
Q 018244          287 RLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +|+.+||+.||++|||+.+++++
T Consensus       260 ~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          260 DLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHCCCChhHCcCHHHHhhC
Confidence            99999999999999999999975

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.3e-46  Score=341.58  Aligned_cols=252  Identities=19%  Similarity=0.204  Sum_probs=197.4

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCch-----HHHHHHHHHHHhcCCCcccccccceeeeCCcc
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-----ARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  128 (359)
                      ....|.+++.||+|+||.||+|.. .+|..||||++.......     ...+.+|+++++.++||||+++++++......
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI   87 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence            345788889999999999999995 468899999997543221     23578999999999999999999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      ++||||+.+ +|.+++.. ....+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||+++....
T Consensus        88 ~lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~  164 (346)
T 1ua2_A           88 SLVFDFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLLDENGVLKLADFGLAKSFGS  164 (346)
T ss_dssp             EEEEECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTS
T ss_pred             EEEEEcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCCHHHEEEcCCCCEEEEecccceeccC
Confidence            999999986 89888854 445689999999999999999999999 999999999999999999999999999987543


Q ss_pred             C----CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccc---c------
Q 018244          209 G----RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL---E------  274 (359)
Q Consensus       209 ~----~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~------  274 (359)
                      .    ....+|+.|+|||++.+. .++.++||||||+++|+|++|..||..................+..   .      
T Consensus       165 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  244 (346)
T 1ua2_A          165 PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP  244 (346)
T ss_dssp             CCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSST
T ss_pred             CcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCc
Confidence            2    245679999999999764 4889999999999999999999888765433222221111100000   0      


Q ss_pred             --------CCC-----ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          275 --------GQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       275 --------~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                              ...     ....+.++.+|+.+||+.||++|||+.+++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             ccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence                    000     13345789999999999999999999999975

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=6.5e-46  Score=351.79  Aligned_cols=249  Identities=16%  Similarity=0.184  Sum_probs=194.2

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeC-----Ccc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DER  128 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~  128 (359)
                      ..|.+++.||+|+||+||+|.. .++..||||++.....  ...+.+.+|+.+|+.++||||+++++++...     ...
T Consensus        26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~  105 (432)
T 3n9x_A           26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL  105 (432)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence            4688999999999999999995 4688999999976432  3356789999999999999999999999776     568


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      |+||||+. ++|.+++.  ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus       106 ~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~~kL~DFGla~~~~~  181 (432)
T 3n9x_A          106 YIVLEIAD-SDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHES-GIIHRDLKPANCLLNQDCSVKVCDFGLARTINS  181 (432)
T ss_dssp             EEEEECCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred             EEEEecCC-cCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence            99999986 59999996  456799999999999999999999999 999999999999999999999999999986543


Q ss_pred             C--------------------------CCcCCCccccCcccc-cCCCCCCccchhhHHHHHHHHHhCCCC----------
Q 018244          209 G--------------------------RSYSTNLAFTPPEYL-RTGRVTPESVMYSFGTLLLDLLSGKHI----------  251 (359)
Q Consensus       209 ~--------------------------~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~elltg~~p----------  251 (359)
                      .                          ....||+.|+|||++ ....++.++|||||||++|||++|..|          
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p  261 (432)
T 3n9x_A          182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFP  261 (432)
T ss_dssp             -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCC
T ss_pred             cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccc
Confidence            2                          345689999999986 455699999999999999999985433          


Q ss_pred             -CCcch------------------hHHHh------------------hhhhhhhcccc-ccCCC-----ChHHHHHHHHH
Q 018244          252 -PPSHA------------------LDLIR------------------DRNIQTLTDSC-LEGQF-----SSDEGTELVRL  288 (359)
Q Consensus       252 -~~~~~------------------~~~~~------------------~~~~~~~~~~~-~~~~~-----~~~~~~~l~~l  288 (359)
                       |++..                  .+.+.                  ........... .....     ....++++.+|
T Consensus       262 ~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL  341 (432)
T 3n9x_A          262 LFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINL  341 (432)
T ss_dssp             SCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHH
T ss_pred             cCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHH
Confidence             32211                  00000                  00000000000 00000     12356789999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+||+.||++|||+++++++
T Consensus       342 l~~mL~~dP~~R~ta~e~L~H  362 (432)
T 3n9x_A          342 LESMLKFNPNKRITIDQALDH  362 (432)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTC
T ss_pred             HHHHhcCCcccCCCHHHHhcC
Confidence            999999999999999999975

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=1.9e-45  Score=330.98  Aligned_cols=249  Identities=17%  Similarity=0.214  Sum_probs=201.8

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      ..+.....||+|+||.||+|.. .++..||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  101 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV  101 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence            3444455679999999999995 568899999998766555678999999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC-CCCeEEeccCCcccCCCC----
Q 018244          136 PNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       136 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~-~~~~kl~DFg~a~~~~~~----  209 (359)
                      ++++|.+++.... ...+++..+..++.|++.||.|||++ +++|+||||+||+++. ++.+||+|||++......    
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~  180 (295)
T 2clq_A          102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT  180 (295)
T ss_dssp             SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----
T ss_pred             CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC-CEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcc
Confidence            9999999997532 33567999999999999999999999 9999999999999987 899999999999865432    


Q ss_pred             CCcCCCccccCcccccCCC--CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          210 RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~~~--~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                      ....+|+.|+|||++.+..  ++.++||||||+++|+|++|+.||............   ..........+...+.++.+
T Consensus       181 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  257 (295)
T 2clq_A          181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK---VGMFKVHPEIPESMSAEAKA  257 (295)
T ss_dssp             CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH---HHHHCCCCCCCTTSCHHHHH
T ss_pred             cccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh---hccccccccccccCCHHHHH
Confidence            3456889999999987653  788999999999999999999888643221111000   00011122345566788999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~  309 (359)
                      |+.+||+.||++|||+.+++++
T Consensus       258 li~~~l~~dp~~Rps~~~ll~~  279 (295)
T 2clq_A          258 FILKCFEPDPDKRACANDLLVD  279 (295)
T ss_dssp             HHHHTTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHccCChhhCCCHHHHhcC
Confidence            9999999999999999999863

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=2.2e-45  Score=330.00  Aligned_cols=247  Identities=18%  Similarity=0.212  Sum_probs=199.9

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeee----CCcc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDER  128 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~  128 (359)
                      -..|.+.+.||+|+||+||+|.. .++..||+|.+....  ....+.+.+|+.+++.++||||+++++++..    ....
T Consensus        25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  104 (290)
T 1t4h_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI  104 (290)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred             ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence            34577888899999999999985 568899999987543  2335668899999999999999999998865    3458


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccCCCCCeeeC-CCCCeEEeccCCccc
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFD-DDVNPRLSCFGLMKN  205 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~--ivH~Dikp~NIll~-~~~~~kl~DFg~a~~  205 (359)
                      ++||||+++++|.+++..  ...+++..++.++.|++.||.|||+. +  ++|+||||+||+++ .++.+||+|||++..
T Consensus       105 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~  181 (290)
T 1t4h_A          105 VLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  181 (290)
T ss_dssp             EEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             EEEEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence            999999999999999963  35689999999999999999999999 8  99999999999998 789999999999976


Q ss_pred             CCCCC--CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          206 SRDGR--SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       206 ~~~~~--~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                      .....  ...+|+.|+|||.+. +.++.++||||||+++|+|++|+.||.................   .....+...++
T Consensus       182 ~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  257 (290)
T 1t4h_A          182 KRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV---KPASFDKVAIP  257 (290)
T ss_dssp             CCTTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC---CCGGGGGCCCH
T ss_pred             ccccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccC---CccccCCCCCH
Confidence            55432  456899999999887 5689999999999999999999999875322211111111111   11112233446


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ++.+|+.+||+.||++|||+.+++++
T Consensus       258 ~l~~li~~~l~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          258 EVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhhC
Confidence            79999999999999999999999863

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=1.3e-45  Score=332.19  Aligned_cols=245  Identities=16%  Similarity=0.150  Sum_probs=207.4

Q ss_pred             CCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      ...|.+.+.||+|+||.||+|... ++..||+|.+.....   ...+.+.+|+.+++.++||||+++++++...+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            457889999999999999999964 578999999875432   2345688999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--  209 (359)
                      |||+++++|.+++..  ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++......  
T Consensus        94 ~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~  170 (294)
T 2rku_A           94 LELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE  170 (294)
T ss_dssp             EECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             EecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence            999999999998863  45789999999999999999999999 9999999999999999999999999999865422  


Q ss_pred             --CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       210 --~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                        ....+|+.|+|||.+.+..++.++||||||+++|+|++|..||..............    .  ....+...+..+.+
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~  244 (294)
T 2rku_A          171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK----N--EYSIPKHINPVAAS  244 (294)
T ss_dssp             CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT----T--CCCCCTTSCHHHHH
T ss_pred             ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhh----c--cCCCccccCHHHHH
Confidence              234678999999999988899999999999999999999999876543322211111    1  11234456678999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ++.+||+.||++|||+.+++++
T Consensus       245 li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          245 LIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             HHHHHTCSSGGGSCCGGGGGGS
T ss_pred             HHHHHcccChhhCcCHHHHhhC
Confidence            9999999999999999999875

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=1.2e-45  Score=339.34  Aligned_cols=249  Identities=16%  Similarity=0.219  Sum_probs=202.8

Q ss_pred             cccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhc--CCCcccccccceeeeCC----cceEE
Q 018244           58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQ--LRNRRLANLLGCCCEGD----ERLLV  131 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~----~~~lv  131 (359)
                      .|.+.+.||+|+||.||+|+. +++.||||++...   ....+.+|++++..  ++||||+++++++....    ..++|
T Consensus        43 ~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv  118 (342)
T 1b6c_B           43 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV  118 (342)
T ss_dssp             HCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEE
T ss_pred             cEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEE
Confidence            577888889999999999998 4789999999753   34567888888887  78999999999998876    78999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCcccccCCCCCeeeCCCCCeEEeccCCc
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT--------SKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a  203 (359)
                      |||+++|+|.+++..   ..+++..++.++.|++.||.|||        +. +++|+||||+||+++.++.+||+|||++
T Consensus       119 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~-~ivH~Dlkp~NIll~~~~~~kL~Dfg~~  194 (342)
T 1b6c_B          119 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLA  194 (342)
T ss_dssp             ECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC-EEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC-CeeeCCCCHHHEEECCCCCEEEEECCCc
Confidence            999999999999953   46899999999999999999999        77 9999999999999999999999999998


Q ss_pred             ccCCCC--------CCcCCCccccCcccccCCC------CCCccchhhHHHHHHHHHhC----------CCCCCcch---
Q 018244          204 KNSRDG--------RSYSTNLAFTPPEYLRTGR------VTPESVMYSFGTLLLDLLSG----------KHIPPSHA---  256 (359)
Q Consensus       204 ~~~~~~--------~~~~~t~~y~aPE~~~~~~------~~~~~Di~slG~il~elltg----------~~p~~~~~---  256 (359)
                      ......        ....+|+.|+|||++.+..      ++.++||||||+++|+|+||          ..||....   
T Consensus       195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~  274 (342)
T 1b6c_B          195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD  274 (342)
T ss_dssp             EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence            765432        3346899999999998652      33689999999999999999          55664321   


Q ss_pred             --hHHHhhhhhhhhccccccCCC-----ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          257 --LDLIRDRNIQTLTDSCLEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       257 --~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                        .......    +.........     ....+..+.+|+.+||+.||++|||+.++++.|+.+.+...
T Consensus       275 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~  339 (342)
T 1b6c_B          275 PSVEEMRKV----VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG  339 (342)
T ss_dssp             CCHHHHHHH----HTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred             ccHHHHHHH----HHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhc
Confidence              1111111    1111112222     23567889999999999999999999999999999876543

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=7.6e-46  Score=339.95  Aligned_cols=246  Identities=16%  Similarity=0.149  Sum_probs=208.0

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC---chHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      ....|.+.+.||+|+||.||+|... ++..||+|++.....   ...+.+.+|+.+++.++|+||+++++++.+.+..++
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  118 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV  118 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            3457889999999999999999954 578999999875422   235668899999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-  209 (359)
                      ||||+.+++|.+++..  ...+++..++.++.||+.||.|||++ +++|+||||+||+++.++.+||+|||++...... 
T Consensus       119 v~e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  195 (335)
T 2owb_A          119 VLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG  195 (335)
T ss_dssp             EECCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             EEecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence            9999999999998863  45799999999999999999999999 9999999999999999999999999999865422 


Q ss_pred             ---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       210 ---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                         ....+|..|+|||++.+..++.++||||||+++|+|++|..||...............      ....+...+..+.
T Consensus       196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~  269 (335)
T 2owb_A          196 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN------EYSIPKHINPVAA  269 (335)
T ss_dssp             CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT------CCCCCTTSCHHHH
T ss_pred             ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC------CCCCCccCCHHHH
Confidence               3456889999999999888999999999999999999999998765433222111111      1123445667899


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHH
Q 018244          287 RLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +|+.+||+.||++|||+.+++++
T Consensus       270 ~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          270 SLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             HHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             HHHHHHccCChhHCcCHHHHhcC
Confidence            99999999999999999999874

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=8e-46  Score=331.49  Aligned_cols=253  Identities=17%  Similarity=0.203  Sum_probs=205.9

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc------hHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .|.+++.||+|+||.||+|... ++..||+|.+......      ..+.+.+|+.+++.++||||+++++++......++
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   85 (283)
T 3bhy_A            6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL   85 (283)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence            5788899999999999999965 6889999998754321      35678999999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC----CeEEeccCCcccC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS  206 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~----~~kl~DFg~a~~~  206 (359)
                      ||||+++++|.+++..  ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++    .+||+|||++...
T Consensus        86 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~  162 (283)
T 3bhy_A           86 ILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI  162 (283)
T ss_dssp             EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred             EEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence            9999999999999963  45689999999999999999999999 999999999999998877    8999999999876


Q ss_pred             CCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                      ...   ....+|+.|+|||++.+..++.++||||||+++|+|++|..||..................  .........+.
T Consensus       163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  240 (283)
T 3bhy_A          163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD--FDEEYFSNTSE  240 (283)
T ss_dssp             C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC--CCHHHHTTCCH
T ss_pred             cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccC--CcchhcccCCH
Confidence            443   2346889999999999889999999999999999999999998765433222211111000  00001123457


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHH--HHHhhh
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTA--LVTLQK  315 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~--L~~~~~  315 (359)
                      .+.+++.+||+.||++|||+.+++++  ++.+..
T Consensus       241 ~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  274 (283)
T 3bhy_A          241 LAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR  274 (283)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence            79999999999999999999999974  555433

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=2.4e-45  Score=327.09  Aligned_cols=247  Identities=17%  Similarity=0.136  Sum_probs=203.3

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .+|.+++.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            46888999999999999999964 68899999997543 23356789999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC------
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------  208 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~------  208 (359)
                      +++++|.+++.  ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++.....      
T Consensus        87 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  163 (276)
T 2yex_A           87 CSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL  163 (276)
T ss_dssp             CTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred             cCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence            99999999986  445799999999999999999999999 999999999999999999999999999876432      


Q ss_pred             CCCcCCCccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          209 GRSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       209 ~~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                      .....+|+.|+|||.+.+..+ +.++||||||+++|+|++|..||............   ..............+..+.+
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  240 (276)
T 2yex_A          164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD---WKEKKTYLNPWKKIDSAPLA  240 (276)
T ss_dssp             BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHH---HHTTCTTSTTGGGSCHHHHH
T ss_pred             ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHH---hhhcccccCchhhcCHHHHH
Confidence            234568899999999987765 67899999999999999999988654321111000   01110111112345678999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~  309 (359)
                      |+.+||+.||++|||+.+++++
T Consensus       241 li~~~l~~~p~~Rps~~~il~~  262 (276)
T 2yex_A          241 LLHKILVENPSARITIPDIKKD  262 (276)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHCCCCchhCCCHHHHhcC
Confidence            9999999999999999998863

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=1.1e-45  Score=337.75  Aligned_cols=249  Identities=16%  Similarity=0.132  Sum_probs=204.2

Q ss_pred             ccccc-ccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEEE
Q 018244           58 MENIV-SEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        58 ~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~  132 (359)
                      .|.+. +.||+|+||+||+|... ++..||+|++....  ......+.+|+.++..+. ||||+++++++......++||
T Consensus        29 ~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~  108 (327)
T 3lm5_A           29 FYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILIL  108 (327)
T ss_dssp             HEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEE
Confidence            35555 67899999999999954 68899999997543  223567899999999995 699999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC---CCCeEEeccCCcccCCCC
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~---~~~~kl~DFg~a~~~~~~  209 (359)
                      ||+.+|+|.+++.......+++..++.++.|++.||.|||+. +++||||||+||+++.   ++.+||+|||++......
T Consensus       109 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~-givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~  187 (327)
T 3lm5_A          109 EYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN-NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA  187 (327)
T ss_dssp             ECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred             EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence            999999999998655567899999999999999999999999 9999999999999997   789999999999876543


Q ss_pred             ---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       210 ---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                         ....||+.|+|||++.+..++.++||||||+++|+|++|..||.................  ..........+..+.
T Consensus       188 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~  265 (327)
T 3lm5_A          188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNV--DYSEETFSSVSQLAT  265 (327)
T ss_dssp             ------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCTTTTTTSCHHHH
T ss_pred             cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhccc--ccCchhhcccCHHHH
Confidence               345689999999999999999999999999999999999999876544333222211111  111222345677899


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHH
Q 018244          287 RLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +|+.+||+.||++|||+.+++++
T Consensus       266 ~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          266 DFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHcCCChhhCcCHHHHhCC
Confidence            99999999999999999999875

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.7e-46  Score=349.65  Aligned_cols=259  Identities=13%  Similarity=0.136  Sum_probs=208.5

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCC--cceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv~  132 (359)
                      ..|.+.+.||+|+||+||+|... ++..||||++..... ...+.+.+|+++++.++||||+++++++....  ..++||
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            46889999999999999999954 588999999985432 23567889999999999999999999998765  679999


Q ss_pred             ecCCCCCHhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee----CCCCCeEEeccCCcccCC
Q 018244          133 EYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll----~~~~~~kl~DFg~a~~~~  207 (359)
                      ||+++|+|.+++.... ...+++..++.++.||+.||+|||++ +|+||||||+|||+    +.++.+||+|||+++...
T Consensus        89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~  167 (396)
T 4eut_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE  167 (396)
T ss_dssp             CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred             ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC-CEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence            9999999999996432 23499999999999999999999999 99999999999999    777889999999998765


Q ss_pred             CCC---CcCCCccccCcccccC--------CCCCCccchhhHHHHHHHHHhCCCCCCcchh----HHHhhhhhhhhcc--
Q 018244          208 DGR---SYSTNLAFTPPEYLRT--------GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNIQTLTD--  270 (359)
Q Consensus       208 ~~~---~~~~t~~y~aPE~~~~--------~~~~~~~Di~slG~il~elltg~~p~~~~~~----~~~~~~~~~~~~~--  270 (359)
                      ...   ...||+.|+|||++.+        ..++.++||||||+++|+|++|+.||.....    .............  
T Consensus       168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~  247 (396)
T 4eut_A          168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA  247 (396)
T ss_dssp             CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTC
T ss_pred             CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCccc
Confidence            432   4568999999999864        4578899999999999999999998753211    1111111100000  


Q ss_pred             -----------------ccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          271 -----------------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       271 -----------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                                       ...........+..+.+++.+||+.||++|||+.++++.++.+...
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             chhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence                             0011123466888999999999999999999999999999987654

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=5.3e-46  Score=350.95  Aligned_cols=247  Identities=15%  Similarity=0.176  Sum_probs=190.8

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--------chHHHHHHHHHHHhcCCCcccccccceeeeCCc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--------PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE  127 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  127 (359)
                      ..|.+.+.||+|+||+||+|.. .++..||||++.....        .....+.+|+++|+.++||||+++++++. .+.
T Consensus       135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~  213 (419)
T 3i6u_A          135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AED  213 (419)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSE
T ss_pred             ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCc
Confidence            4678888999999999999985 5688999999875321        11224789999999999999999999985 456


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC---CCeEEeccCCcc
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMK  204 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~---~~~kl~DFg~a~  204 (359)
                      .++||||+++|+|.+++.  ....+++..+..++.|++.||+|||++ +|+||||||+|||++.+   +.+||+|||+++
T Consensus       214 ~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~  290 (419)
T 3i6u_A          214 YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  290 (419)
T ss_dssp             EEEEEECCTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred             eEEEEEcCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEecCCCcceEEEeecccce
Confidence            899999999999999886  456799999999999999999999999 99999999999999754   459999999998


Q ss_pred             cCCCC---CCcCCCccccCcccccC---CCCCCccchhhHHHHHHHHHhCCCCCCcchhHH-HhhhhhhhhccccccCCC
Q 018244          205 NSRDG---RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQF  277 (359)
Q Consensus       205 ~~~~~---~~~~~t~~y~aPE~~~~---~~~~~~~Di~slG~il~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~  277 (359)
                      .....   ....||+.|+|||++.+   ..++.++||||||+++|+|++|..||....... ...........  .....
T Consensus       291 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~--~~~~~  368 (419)
T 3i6u_A          291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN--FIPEV  368 (419)
T ss_dssp             SCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCC--CCHHH
T ss_pred             ecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCC--CCchh
Confidence            76544   34568999999999864   568889999999999999999999986542211 11000000000  00000


Q ss_pred             ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ....+..+.+|+.+||+.||++|||+.+++++
T Consensus       369 ~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          369 WAEVSEKALDLVKKLLVVDPKARFTTEEALRH  400 (419)
T ss_dssp             HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            12346789999999999999999999999874

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=1.1e-45  Score=356.86  Aligned_cols=247  Identities=15%  Similarity=0.143  Sum_probs=202.6

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC-------------chHHHHHHHHHHHhcCCCccccccccee
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-------------PDARQFLEEARAVGQLRNRRLANLLGCC  122 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~~~~~~  122 (359)
                      ..|.+++.||+|+||+||+|.. .++..||+|++.....             ...+.+.+|+.+|+.++||||+++++++
T Consensus        36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~  115 (504)
T 3q5i_A           36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF  115 (504)
T ss_dssp             GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            5688999999999999999995 4688999999975432             2246788999999999999999999999


Q ss_pred             eeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC---CeEEec
Q 018244          123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSC  199 (359)
Q Consensus       123 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~---~~kl~D  199 (359)
                      .+....++||||+++|+|.+++..  ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++   .+||+|
T Consensus       116 ~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~D  192 (504)
T 3q5i_A          116 EDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKH-NIVHRDIKPENILLENKNSLLNIKIVD  192 (504)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred             EcCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCcHHHEEEecCCCCccEEEEE
Confidence            999999999999999999999863  45699999999999999999999999 999999999999998775   699999


Q ss_pred             cCCcccCCCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCC
Q 018244          200 FGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ  276 (359)
Q Consensus       200 Fg~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  276 (359)
                      ||++......   ....||+.|+|||++. +.++.++||||||+++|+|++|..||....................  ..
T Consensus       193 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--~~  269 (504)
T 3q5i_A          193 FGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD--FN  269 (504)
T ss_dssp             CTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC--HH
T ss_pred             CCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC--cc
Confidence            9999876544   3456899999999987 5699999999999999999999999987654433322221111000  00


Q ss_pred             CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       277 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .....+.++.+|+.+||+.||.+|||+.+++++
T Consensus       270 ~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          270 DWKNISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            012356789999999999999999999999975

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=6.4e-46  Score=344.37  Aligned_cols=248  Identities=18%  Similarity=0.235  Sum_probs=184.0

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeC------Cc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG------DE  127 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~  127 (359)
                      ..|.+++.||+|+||.||+|.. .+|..||||++.....  ...+.+.+|+.+|+.++||||+++++++...      ..
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  108 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND  108 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence            4688999999999999999984 5688999999976432  2356788999999999999999999998654      56


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      .++|+||+ +++|.+++.   ...+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++...
T Consensus       109 ~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~  183 (367)
T 2fst_X          109 VYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTA  183 (367)
T ss_dssp             CEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred             EEEEeccc-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence            79999999 679999884   36799999999999999999999999 99999999999999999999999999998754


Q ss_pred             CC-CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhh-----------------
Q 018244          208 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL-----------------  268 (359)
Q Consensus       208 ~~-~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~-----------------  268 (359)
                      .. ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||................                 
T Consensus       184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~  263 (367)
T 2fst_X          184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR  263 (367)
T ss_dssp             -------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHH
T ss_pred             ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence            43 34578999999999987 578999999999999999999999987653322111111100                 


Q ss_pred             --cccccc-CC-----CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          269 --TDSCLE-GQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       269 --~~~~~~-~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                        ...... ..     .....++.+.+|+.+||+.||++|||+.+++++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             HHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence              000000 00     011245789999999999999999999999975

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=1.5e-45  Score=335.30  Aligned_cols=255  Identities=19%  Similarity=0.248  Sum_probs=202.4

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      .+..|.+.+.||+|+||.||+|....  .+|+|.+.....  ...+.+.+|+.+++.++||||+++++++......++||
T Consensus        31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~  108 (319)
T 2y4i_B           31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT  108 (319)
T ss_dssp             CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred             CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence            45778999999999999999999754  499999875432  22345778999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----  208 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----  208 (359)
                      ||+++++|.+++.. ....+++..++.++.|++.||.|||++ +++|+||||+||+++ ++.+||+|||++.....    
T Consensus       109 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~  185 (319)
T 2y4i_B          109 SLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAK-GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG  185 (319)
T ss_dssp             BCCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHT-TCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred             ecccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence            99999999999964 345689999999999999999999999 999999999999998 68999999999765421    


Q ss_pred             -----CCCcCCCccccCcccccC---------CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccccc
Q 018244          209 -----GRSYSTNLAFTPPEYLRT---------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE  274 (359)
Q Consensus       209 -----~~~~~~t~~y~aPE~~~~---------~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  274 (359)
                           .....||+.|+|||.+.+         ..++.++||||||+++|+|++|..||..................    
T Consensus       186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~----  261 (319)
T 2y4i_B          186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKP----  261 (319)
T ss_dssp             --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCC----
T ss_pred             ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCC----
Confidence                 123357899999999874         34788999999999999999999998765544333222111111    


Q ss_pred             CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      .......+.++.+++.+||+.||++|||+.++++.|+.+.+...
T Consensus       262 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~  305 (319)
T 2y4i_B          262 NLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR  305 (319)
T ss_dssp             CCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred             CCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence            11122345679999999999999999999999999999876543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=4.9e-46  Score=341.14  Aligned_cols=258  Identities=20%  Similarity=0.243  Sum_probs=196.7

Q ss_pred             cCCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHH--HHhcCCCcccccccceeee-----CC
Q 018244           54 SGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEAR--AVGQLRNRRLANLLGCCCE-----GD  126 (359)
Q Consensus        54 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~--~l~~l~h~niv~~~~~~~~-----~~  126 (359)
                      -++..|.+++.||+|+||+||+|+. ++..||||++....   ...+..|.+  .+..++||||+++++.+..     ..
T Consensus        10 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   85 (336)
T 3g2f_A           10 LDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM   85 (336)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred             cChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence            3567899999999999999999987 67899999997543   333444444  4556899999999975533     23


Q ss_pred             cceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--------CcccccCCCCCeeeCCCCCeEEe
Q 018244          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE--------RALYHDLNAYRIVFDDDVNPRLS  198 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--------~ivH~Dikp~NIll~~~~~~kl~  198 (359)
                      ..++||||+++|+|.+++..   ...++..+..++.||+.||.|||+..        +|+||||||+|||++.++.+||+
T Consensus        86 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~  162 (336)
T 3g2f_A           86 EYLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS  162 (336)
T ss_dssp             EEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred             eEEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEe
Confidence            57899999999999999953   34589999999999999999999852        89999999999999999999999


Q ss_pred             ccCCcccCCCC------------CCcCCCccccCcccccC-------CCCCCccchhhHHHHHHHHHhCCCCCCcchh-H
Q 018244          199 CFGLMKNSRDG------------RSYSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-D  258 (359)
Q Consensus       199 DFg~a~~~~~~------------~~~~~t~~y~aPE~~~~-------~~~~~~~Di~slG~il~elltg~~p~~~~~~-~  258 (359)
                      |||++......            ....||+.|+|||++.+       ..++.++||||||+++|||++|..|+..... .
T Consensus       163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~  242 (336)
T 3g2f_A          163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP  242 (336)
T ss_dssp             CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred             eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence            99999765432            13458999999999986       3466789999999999999999766533211 0


Q ss_pred             HHh-------------hhhhhhhccccccCCC------ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          259 LIR-------------DRNIQTLTDSCLEGQF------SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       259 ~~~-------------~~~~~~~~~~~~~~~~------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      ...             ...............+      ....+.++.+|+.+||+.||++|||+.++++.|+.+...-.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~  321 (336)
T 3g2f_A          243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE  321 (336)
T ss_dssp             CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred             HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence            000             0000000011111111      23467789999999999999999999999999999865433

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=5.7e-47  Score=353.00  Aligned_cols=240  Identities=15%  Similarity=0.099  Sum_probs=189.6

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCC---CCchHHHHHHHH---HHHhcCCCccccccc-------cee
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS---AWPDARQFLEEA---RAVGQLRNRRLANLL-------GCC  122 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~h~niv~~~-------~~~  122 (359)
                      ..|.+.+.||+|+||+||+|.. .+|..||||++...   .....+.+.+|+   +.|+.++||||++++       +++
T Consensus        73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~  152 (377)
T 3byv_A           73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  152 (377)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred             ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence            5688889999999999999994 57899999999743   333457788999   555566899999998       554


Q ss_pred             eeCC-----------------cceEEEecCCCCCHhhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 018244          123 CEGD-----------------ERLLVAEYMPNDTLAKHLFHWE-----TQPMKWAMRLRVALHIAEALEYCTSKERALYH  180 (359)
Q Consensus       123 ~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~  180 (359)
                      ...+                 ..++||||+ +|+|.+++....     ...+++..++.|+.||+.||+|||++ +|+||
T Consensus       153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHr  230 (377)
T 3byv_A          153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-GLVHT  230 (377)
T ss_dssp             ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT-TEECS
T ss_pred             hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC-CeecC
Confidence            4432                 378999999 679999997421     12234588899999999999999999 99999


Q ss_pred             cCCCCCeeeCCCCCeEEeccCCcccCCCC-CCcCCCccccCcccccCC-----------CCCCccchhhHHHHHHHHHhC
Q 018244          181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTG-----------RVTPESVMYSFGTLLLDLLSG  248 (359)
Q Consensus       181 Dikp~NIll~~~~~~kl~DFg~a~~~~~~-~~~~~t~~y~aPE~~~~~-----------~~~~~~Di~slG~il~elltg  248 (359)
                      ||||+|||++.++.+||+|||+++..... ....| +.|+|||++.+.           .++.++||||||+++|+|++|
T Consensus       231 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg  309 (377)
T 3byv_A          231 YLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA  309 (377)
T ss_dssp             CCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHS
T ss_pred             CCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHC
Confidence            99999999999999999999999875543 24456 999999999877           799999999999999999999


Q ss_pred             CCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          249 KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       249 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.||.........    ..+..      .....+.++.+|+.+||+.||++|||+.+++++
T Consensus       310 ~~Pf~~~~~~~~~----~~~~~------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  360 (377)
T 3byv_A          310 DLPITKDAALGGS----EWIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET  360 (377)
T ss_dssp             SCCC------CCS----GGGGS------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred             CCCCcccccccch----hhhhh------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence            9988654322111    11111      113446789999999999999999999999963

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=2.3e-45  Score=327.36  Aligned_cols=245  Identities=18%  Similarity=0.246  Sum_probs=200.0

Q ss_pred             CCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      ...|.+.+.||+|+||.||+|... +++.||||.+....   ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            357888999999999999999965 68899999997532   12345788999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-  210 (359)
                      |||+++++|.+++..  ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++....... 
T Consensus        90 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~  166 (276)
T 2h6d_A           90 MEYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF  166 (276)
T ss_dssp             EECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHH-CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred             EeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence            999999999999974  35689999999999999999999999 99999999999999999999999999998765432 


Q ss_pred             --CcCCCccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          211 --SYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       211 --~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                        ...+|+.|+|||.+.+..+ +.++||||||+++|+|++|..||...............      ....+...+..+.+
T Consensus       167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~  240 (276)
T 2h6d_A          167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG------VFYIPEYLNRSVAT  240 (276)
T ss_dssp             ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred             eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC------cccCchhcCHHHHH
Confidence              3467899999999987765 57999999999999999999998765443332221111      11233455678999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ++.+||+.||++|||+.+++++
T Consensus       241 li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          241 LLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHS
T ss_pred             HHHHHccCChhhCCCHHHHHhC
Confidence            9999999999999999999975

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=5.1e-45  Score=331.21  Aligned_cols=247  Identities=15%  Similarity=0.182  Sum_probs=201.8

Q ss_pred             CCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ...|.+++.||.|+||.||+|... +|..||+|.+....  ..+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus        28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (314)
T 3com_A           28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY  105 (314)
T ss_dssp             --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence            356888999999999999999964 58899999997643  346789999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----C
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~  210 (359)
                      +++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++......    .
T Consensus       106 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  183 (314)
T 3com_A          106 CGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFM-RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN  183 (314)
T ss_dssp             CTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBC
T ss_pred             CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccC
Confidence            999999999863 356799999999999999999999999 9999999999999999999999999999765433    3


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ...+|+.|+|||.+.+..++.++||||||+++|+|++|..||..............   ........+...+..+.+|+.
T Consensus       184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~  260 (314)
T 3com_A          184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT---NPPPTFRKPELWSDNFTDFVK  260 (314)
T ss_dssp             CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---SCCCCCSSGGGSCHHHHHHHH
T ss_pred             ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc---CCCcccCCcccCCHHHHHHHH
Confidence            45678999999999988999999999999999999999998865432211111000   000111123445778999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~  309 (359)
                      +||+.||++|||+.+++++
T Consensus       261 ~~l~~dp~~Rpt~~~ll~~  279 (314)
T 3com_A          261 QCLVKSPEQRATATQLLQH  279 (314)
T ss_dssp             HHTCSCTTTSCCHHHHTTS
T ss_pred             HHccCChhhCcCHHHHHhC
Confidence            9999999999999999874

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=2.7e-45  Score=347.10  Aligned_cols=250  Identities=18%  Similarity=0.195  Sum_probs=201.5

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC------CCcccccccceeeeCCcce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL------RNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~~~~~~~~~~~  129 (359)
                      ..|++++.||+|+||+||+|.. .++..||||++.... .....+.+|+.+++.+      .|+||+++++++......+
T Consensus        97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  175 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC  175 (429)
T ss_dssp             TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred             CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence            3588999999999999999985 458899999997542 2345677788888777      5779999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCC--eEEeccCCcccCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--PRLSCFGLMKNSR  207 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~--~kl~DFg~a~~~~  207 (359)
                      +||||+. ++|.+++.......+++..+..++.||+.||+|||+. +|+||||||+|||++.++.  +||+|||++....
T Consensus       176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~  253 (429)
T 3kvw_A          176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH  253 (429)
T ss_dssp             EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH-TEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred             EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence            9999996 5899999876666799999999999999999999999 9999999999999999887  9999999997655


Q ss_pred             CC-CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhh-----------------c
Q 018244          208 DG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL-----------------T  269 (359)
Q Consensus       208 ~~-~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~-----------------~  269 (359)
                      .. ....+|+.|+|||++.+..++.++|||||||++|+|++|..||................                 .
T Consensus       254 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~  333 (429)
T 3kvw_A          254 QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFV  333 (429)
T ss_dssp             CCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHB
T ss_pred             CcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhcc
Confidence            43 35578999999999999999999999999999999999999887653322211111000                 0


Q ss_pred             cccc---------------------------c-CC--------CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          270 DSCL---------------------------E-GQ--------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       270 ~~~~---------------------------~-~~--------~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ....                           . ..        .....++++.+|+.+||+.||++|||+.+++++
T Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~H  409 (429)
T 3kvw_A          334 SSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRH  409 (429)
T ss_dssp             CTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCC
Confidence            0000                           0 00        011125679999999999999999999999874

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=9.4e-46  Score=365.48  Aligned_cols=243  Identities=21%  Similarity=0.246  Sum_probs=202.6

Q ss_pred             cCCCCCCcEEEEEEe---CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCC
Q 018244           64 EHGEKAPNVVYKGKL---ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      .||+|+||+||+|.+   ..+..||||+++....  ...+.+.+|+++|+.++|||||++++++. .+..+|||||+.+|
T Consensus       376 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~g  454 (635)
T 4fl3_A          376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELG  454 (635)
T ss_dssp             EEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTTE
T ss_pred             EeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCCC
Confidence            689999999999964   3467899999986432  23577999999999999999999999996 45689999999999


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-------C
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-------S  211 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-------~  211 (359)
                      +|.+++.  ....+++..+..|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......       .
T Consensus       455 ~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~-~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~  531 (635)
T 4fl3_A          455 PLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH  531 (635)
T ss_dssp             EHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------
T ss_pred             CHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccC
Confidence            9999996  445799999999999999999999999 99999999999999999999999999998664332       2


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ..+|..|+|||++.+..++.++||||||+++|||++ |+.||.............     .......+..++.++.+||.
T Consensus       532 ~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~-----~~~~~~~p~~~~~~l~~li~  606 (635)
T 4fl3_A          532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-----KGERMGCPAGCPREMYDLMN  606 (635)
T ss_dssp             ---CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-----TTCCCCCCTTCCHHHHHHHH
T ss_pred             CCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----cCCCCCCCCCCCHHHHHHHH
Confidence            235678999999998899999999999999999998 998887654433322221     11223345567789999999


Q ss_pred             HhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          291 RCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      +||+.||++|||+.++++.|+.+..
T Consensus       607 ~cl~~dP~~RPs~~~l~~~L~~~~~  631 (635)
T 4fl3_A          607 LCWTYDVENRPGFAAVELRLRNYYY  631 (635)
T ss_dssp             HHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            9999999999999999999998754

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=1.3e-45  Score=331.30  Aligned_cols=253  Identities=21%  Similarity=0.272  Sum_probs=200.1

Q ss_pred             CCcccccccCCCCCCcEEEEEEeC--CCc--EEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLE--NQF--RIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  128 (359)
                      ...|++++.||+|+||+||+|.+.  ++.  .||+|++....   ....+.+.+|+++++.++||||+++++++.... .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            357889999999999999999842  233  69999997642   234567899999999999999999999997754 8


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      ++||||+++++|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++.....
T Consensus        96 ~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  173 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  173 (291)
T ss_dssp             EEEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             eeeEecccCCCHHHHHHh-ccCCcCHHHHHHHHHHHHHHHHHHHhC-CcccCCCchheEEEcCCCCEEEccccccccccc
Confidence            999999999999999964 335689999999999999999999999 999999999999999999999999999887644


Q ss_pred             CC-------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChH
Q 018244          209 GR-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD  280 (359)
Q Consensus       209 ~~-------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (359)
                      ..       ...+|..|+|||.+.+..++.++||||||+++|+|++ |..||..............    .......+..
T Consensus       174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~  249 (291)
T 1u46_A          174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK----EGERLPRPED  249 (291)
T ss_dssp             -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT----SCCCCCCCTT
T ss_pred             cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHc----cCCCCCCCcC
Confidence            32       2346778999999988889999999999999999999 8988876543332222111    1112223445


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          281 EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      .+.++.+++.+||+.||++|||+.++++.|+.+..
T Consensus       250 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          250 CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             cCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence            67889999999999999999999999999998765

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.8e-46  Score=345.46  Aligned_cols=249  Identities=16%  Similarity=0.202  Sum_probs=202.4

Q ss_pred             CCcccccccCCCCCCcEEEEEEe----CCCcEEEEEEeCCCCC----chHHHHHHHHHHHhcC-CCcccccccceeeeCC
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW----PDARQFLEEARAVGQL-RNRRLANLLGCCCEGD  126 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~  126 (359)
                      ...|.+++.||+|+||+||+|..    .++..||||++.....    ...+.+.+|+++|..+ +||||+++++++....
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            46788999999999999999986    3688999999975321    2234567899999999 6999999999999999


Q ss_pred             cceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      ..++||||+++|+|.+++..  ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~  209 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEF  209 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred             eEEEEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence            99999999999999999974  35699999999999999999999999 9999999999999999999999999998765


Q ss_pred             CCC-----CCcCCCccccCcccccCC--CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCCh
Q 018244          207 RDG-----RSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS  279 (359)
Q Consensus       207 ~~~-----~~~~~t~~y~aPE~~~~~--~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (359)
                      ...     ....||+.|+|||++.+.  .++.++||||||+++|+|++|..||..................  ....++.
T Consensus       210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~  287 (355)
T 1vzo_A          210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQ  287 (355)
T ss_dssp             CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCCT
T ss_pred             ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc--cCCCCCc
Confidence            322     234689999999999863  4788999999999999999999998643211111111111111  1123455


Q ss_pred             HHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 018244          280 DEGTELVRLASRCLQYEPRERP-----NPRSLVTA  309 (359)
Q Consensus       280 ~~~~~l~~li~~cl~~dp~~Rp-----s~~~il~~  309 (359)
                      ..+..+.+|+.+||+.||++||     |+.+++++
T Consensus       288 ~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          288 EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            6778899999999999999999     88988875

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=5.7e-45  Score=329.47  Aligned_cols=246  Identities=18%  Similarity=0.177  Sum_probs=201.9

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC----CchHHHHHHHHHHHhcCCCcccccccceee--eCCcc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCC--EGDER  128 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~  128 (359)
                      ...|.+.+.||+|+||.||+|.. .++..||+|++....    ....+.+.+|+++++.++||||+++++++.  .....
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            35788999999999999999995 568899999997542    233567899999999999999999999984  45678


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      ++||||+.++ |.+++.......+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++.....
T Consensus        84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~  161 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ-GIVHKDIKPGNLLLTTGGTLKISALGVAEALHP  161 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence            9999999876 77877765667899999999999999999999999 999999999999999999999999999986543


Q ss_pred             C------CCcCCCccccCcccccCCC--CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChH
Q 018244          209 G------RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD  280 (359)
Q Consensus       209 ~------~~~~~t~~y~aPE~~~~~~--~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (359)
                      .      ....+|+.|+|||++.+..  ++.++||||||+++|+|++|..||...............      ....+..
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~------~~~~~~~  235 (305)
T 2wtk_C          162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG------SYAIPGD  235 (305)
T ss_dssp             TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC------CCCCCSS
T ss_pred             cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC------CCCCCCc
Confidence            2      2345789999999998644  477999999999999999999998765443332221111      1123445


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          281 EGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+..+.+|+.+||+.||++|||+.+++++
T Consensus       236 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          236 CGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             cCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            66789999999999999999999999975

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=2.9e-45  Score=339.99  Aligned_cols=248  Identities=12%  Similarity=0.110  Sum_probs=203.7

Q ss_pred             CCcccccccCCCCCCcEEEEEE------eCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC---CcccccccceeeeCC
Q 018244           56 FAMENIVSEHGEKAPNVVYKGK------LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGCCCEGD  126 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~  126 (359)
                      -..|.+.+.||+|+||+||+|.      ..+++.||||++....   ...+.+|++++..++   |+||+++++++...+
T Consensus        64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~  140 (365)
T 3e7e_A           64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN  140 (365)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred             CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence            3568888899999999999993      4568899999998643   456778888888886   999999999999999


Q ss_pred             cceEEEecCCCCCHhhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC-----------C
Q 018244          127 ERLLVAEYMPNDTLAKHLFHW---ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-----------D  192 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~-----------~  192 (359)
                      ..+|||||+++|+|.+++...   ....+++..++.++.||+.||+|||+. +|+||||||+|||++.           +
T Consensus       141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~ivHrDiKp~NIll~~~~~~~~~~~~~~  219 (365)
T 3e7e_A          141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC-EIIHGDIKPDNFILGNGFLEQDDEDDLS  219 (365)
T ss_dssp             CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECGGGTCC------C
T ss_pred             CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC-CeecCCCCHHHEEecccccCcccccccc
Confidence            999999999999999999642   345799999999999999999999999 9999999999999998           8


Q ss_pred             CCeEEeccCCcccCC---C---CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh
Q 018244          193 VNPRLSCFGLMKNSR---D---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ  266 (359)
Q Consensus       193 ~~~kl~DFg~a~~~~---~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~  266 (359)
                      +.+||+|||+++...   .   .....||+.|+|||++.+..++.++||||||+++|||+||+.||.........     
T Consensus       220 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-----  294 (365)
T 3e7e_A          220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK-----  294 (365)
T ss_dssp             TTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE-----
T ss_pred             CCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee-----
Confidence            999999999996532   1   13456899999999999999999999999999999999999887544221100     


Q ss_pred             hhccccccCCCChHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHHhhhcc
Q 018244          267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER-PNPRSLVTALVTLQKDT  317 (359)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R-ps~~~il~~L~~~~~~~  317 (359)
                        ...... .  ...++.+.+++..||+.+|.+| |+++++.+.|+.+....
T Consensus       295 --~~~~~~-~--~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~  341 (365)
T 3e7e_A          295 --PEGLFR-R--LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH  341 (365)
T ss_dssp             --ECSCCT-T--CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             --echhcc-c--cCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence              011111 1  1235678899999999999999 68888888888876643

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=2.2e-46  Score=348.26  Aligned_cols=248  Identities=12%  Similarity=0.028  Sum_probs=183.6

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc---hHHHHHHHH---HHHhcCCCccccccc-------ceee
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEA---RAVGQLRNRRLANLL-------GCCC  123 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~---~~l~~l~h~niv~~~-------~~~~  123 (359)
                      .|.+++.||+|+||+||+|.. .++..||||++......   ..+.+.+|+   +.|+. +||||++++       +++.
T Consensus        63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEE
T ss_pred             eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhee
Confidence            478889999999999999995 47889999999876532   244567774   45555 799988855       3333


Q ss_pred             eC-----------------CcceEEEecCCCCCHhhhhhcCCCCCCCHHHH------HHHHHHHHHHHHHhhcCCCcccc
Q 018244          124 EG-----------------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMR------LRVALHIAEALEYCTSKERALYH  180 (359)
Q Consensus       124 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~qi~~~L~~LH~~~~ivH~  180 (359)
                      ..                 ...+|||||++ |+|.+++... ...+++..+      ..++.||+.||+|||++ +|+||
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~-~ivHr  218 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSK-GLVHG  218 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT-TEEET
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC-CCccC
Confidence            22                 33799999998 7999999752 233455555      77889999999999999 99999


Q ss_pred             cCCCCCeeeCCCCCeEEeccCCcccCCCCC-CcCCCccccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCCCcchh
Q 018244          181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-SYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL  257 (359)
Q Consensus       181 Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~elltg~~p~~~~~~  257 (359)
                      ||||+|||++.++.+||+|||+++...... ...+|+.|+|||++.+  ..++.++||||||+++|+|++|+.||.....
T Consensus       219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~  298 (371)
T 3q60_A          219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP  298 (371)
T ss_dssp             TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred             cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence            999999999999999999999998776554 5567799999999987  6799999999999999999999999876532


Q ss_pred             HHHhhhhh---hhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          258 DLIRDRNI---QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       258 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ........   ................+..+.+|+.+||+.||++|||+.+++++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  353 (371)
T 3q60_A          299 GIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET  353 (371)
T ss_dssp             TCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred             ccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            21110000   00001111111123567889999999999999999999999863

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=9.5e-46  Score=334.03  Aligned_cols=254  Identities=18%  Similarity=0.260  Sum_probs=187.9

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      +...|.+.+.||+|+||.||+|.. .++..||||.+..... ...+.+.+|+.+++.++||||+++++++...+..++||
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM   92 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence            346788999999999999999984 5688999999875432 33556889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhc------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          133 EYMPNDTLAKHLFH------WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       133 e~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      ||+++++|.+++..      .....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++...
T Consensus        93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  171 (303)
T 2vwi_A           93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN-GQIHRDVKAGNILLGEDGSVQIADFGVSAFL  171 (303)
T ss_dssp             ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred             hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence            99999999999863      1345689999999999999999999999 9999999999999999999999999998754


Q ss_pred             CCC---------CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhc----ccc
Q 018244          207 RDG---------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT----DSC  272 (359)
Q Consensus       207 ~~~---------~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~----~~~  272 (359)
                      ...         ....+|+.|+|||.+.+ ..++.++||||||+++|+|++|..||.................    ...
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  251 (303)
T 2vwi_A          172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGV  251 (303)
T ss_dssp             C---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC--
T ss_pred             ccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccccc
Confidence            332         23467899999999875 4689999999999999999999998865432221111111100    000


Q ss_pred             ccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       273 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .........+.++.+|+.+||+.||++|||+.+++++
T Consensus       252 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  288 (303)
T 2vwi_A          252 QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH  288 (303)
T ss_dssp             ---CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             ccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            0111223456789999999999999999999999874

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=5.3e-45  Score=338.95  Aligned_cols=247  Identities=15%  Similarity=0.183  Sum_probs=192.4

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCC------c
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD------E  127 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~  127 (359)
                      ..|.+++.||+|+||.||+|.. .++..||||++.....  ...+.+.+|+.+++.++||||+++++++....      .
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~  104 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD  104 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred             hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence            5788999999999999999985 4688999999976432  23456889999999999999999999997665      6


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      .++||||+++ +|.+++.    ..+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++...
T Consensus       105 ~~lv~e~~~~-~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~  178 (371)
T 2xrw_A          105 VYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  178 (371)
T ss_dssp             EEEEEECCSE-EHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred             eEEEEEcCCC-CHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHC-CeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence            7999999975 7888874    3489999999999999999999999 99999999999999999999999999998765


Q ss_pred             CC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcc--------------
Q 018244          208 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD--------------  270 (359)
Q Consensus       208 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~--------------  270 (359)
                      ..   ....||+.|+|||++.+..++.++||||||+++|+|++|+.||..................              
T Consensus       179 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  258 (371)
T 2xrw_A          179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR  258 (371)
T ss_dssp             -----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHH
T ss_pred             cccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence            43   3456899999999999989999999999999999999999998765332211111110000              


Q ss_pred             -------------------ccccCC---CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          271 -------------------SCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       271 -------------------~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                         ....+.   .....+.++.+|+.+||+.||++|||+.+++++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence                               000000   011236789999999999999999999999975

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=2.8e-45  Score=335.20  Aligned_cols=245  Identities=17%  Similarity=0.198  Sum_probs=198.6

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-Ccccccccceeee--CCcceEE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCE--GDERLLV  131 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~--~~~~~lv  131 (359)
                      -..|++++.||+|+||+||+|.. .++..||||++....   .+.+.+|+.+++.++ ||||+++++++..  ....++|
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv  111 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  111 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence            35789999999999999999984 578899999997533   567899999999997 9999999999987  5678999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC-CeEEeccCCcccCCCC-
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~-~~kl~DFg~a~~~~~~-  209 (359)
                      |||+.+++|.+++.     .+++..+..++.|++.||.|||++ +++||||||+|||++.++ .+||+|||+++..... 
T Consensus       112 ~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~  185 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ  185 (330)
T ss_dssp             EECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred             EeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence            99999999999884     389999999999999999999999 999999999999999776 8999999999865433 


Q ss_pred             --CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHH--Hhh-------hhhhhhc--------
Q 018244          210 --RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL--IRD-------RNIQTLT--------  269 (359)
Q Consensus       210 --~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~--~~~-------~~~~~~~--------  269 (359)
                        ....+|..|+|||.+.+ ..++.++||||||+++|+|++|+.||.......  ...       .......        
T Consensus       186 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  265 (330)
T 3nsz_A          186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD  265 (330)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCC
T ss_pred             ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccc
Confidence              34567899999999987 568999999999999999999999885331110  000       0000000        


Q ss_pred             ---------------cccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          270 ---------------DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       270 ---------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                     ............+.++.+|+.+||+.||++|||+.+++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  320 (330)
T ss_dssp             THHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             cchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                           0000111122357889999999999999999999999874

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.5e-45  Score=332.72  Aligned_cols=248  Identities=14%  Similarity=0.194  Sum_probs=199.4

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-CCcccccccceeee------CCc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE------GDE  127 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~------~~~  127 (359)
                      ...|++++.||.|+||.||+|.. .++..||||++.... ...+.+.+|+.+++.+ +||||+++++++..      ...
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~  101 (326)
T 2x7f_A           23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ  101 (326)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence            45678889999999999999995 578899999997544 3356788999999999 79999999999987      467


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      .++||||+++|+|.+++.......+++..++.++.||+.||.|||+. +++|+||||+||+++.++.+||+|||++....
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  180 (326)
T 2x7f_A          102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD  180 (326)
T ss_dssp             EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred             EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence            89999999999999999765556799999999999999999999999 99999999999999999999999999987654


Q ss_pred             CC----CCcCCCccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCC
Q 018244          208 DG----RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS  278 (359)
Q Consensus       208 ~~----~~~~~t~~y~aPE~~~-----~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (359)
                      ..    ....+|+.|+|||++.     +..++.++||||||+++|+|++|..||............    ..........
T Consensus       181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~  256 (326)
T 2x7f_A          181 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI----PRNPAPRLKS  256 (326)
T ss_dssp             ----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH----HHSCCCCCSC
T ss_pred             cCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh----hcCccccCCc
Confidence            32    3456899999999987     456899999999999999999999988654322211111    1111111123


Q ss_pred             hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          279 SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ...+..+.+|+.+||+.||++|||+.+++++
T Consensus       257 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  287 (326)
T 2x7f_A          257 KKWSKKFQSFIESCLVKNHSQRPATEQLMKH  287 (326)
T ss_dssp             SCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             cccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            3456789999999999999999999999874

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.9e-45  Score=341.12  Aligned_cols=248  Identities=18%  Similarity=0.244  Sum_probs=199.1

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeC-----Ccce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~  129 (359)
                      ..|.+++.||+|+||.||+|.. .++..||||++...... ..+.+.+|+++|+.++||||+++++++...     ...+
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  106 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY  106 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence            3688999999999999999985 46889999999854433 346788999999999999999999998765     3689


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +||||+.+ +|.+++..   ..+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++......
T Consensus       107 iv~e~~~~-~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~  181 (364)
T 3qyz_A          107 IVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD  181 (364)
T ss_dssp             EEEECCSE-EHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred             EEEcccCc-CHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence            99999975 89998853   4699999999999999999999999 9999999999999999999999999999865432


Q ss_pred             -------CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccc----------
Q 018244          210 -------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS----------  271 (359)
Q Consensus       210 -------~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~----------  271 (359)
                             ....||+.|+|||++.+. .++.++||||||+++|+|++|+.||..................+          
T Consensus       182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  261 (364)
T 3qyz_A          182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN  261 (364)
T ss_dssp             GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCC
T ss_pred             CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence                   234789999999987654 48999999999999999999999987653322211111100000          


Q ss_pred             ---------c-ccCC-----CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          272 ---------C-LEGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       272 ---------~-~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                               . ....     .....+.++.+|+.+||+.||++|||+.+++++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  314 (364)
T ss_dssp             HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                     0 0000     112346789999999999999999999999975

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=9.2e-45  Score=332.48  Aligned_cols=250  Identities=17%  Similarity=0.167  Sum_probs=204.4

Q ss_pred             CcccccccCCCCCCcEEEEEEe--CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcc------cccccceeeeCCcc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR------LANLLGCCCEGDER  128 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~~~  128 (359)
                      ..|++++.||+|+||+||+|..  .++..||||++.... ...+.+.+|+++++.++|++      ++++++++...+..
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~   92 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI   92 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred             CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence            4788999999999999999985  368899999997542 33566888999999987765      99999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC-----------------
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-----------------  191 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~-----------------  191 (359)
                      ++||||+ +++|.+++.......+++..+..++.|++.||+|||++ +++||||||+|||++.                 
T Consensus        93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~  170 (339)
T 1z57_A           93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN-KLTHTDLKPENILFVQSDYTEAYNPKIKRDERT  170 (339)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred             EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence            9999999 78999999865556789999999999999999999999 9999999999999987                 


Q ss_pred             --CCCeEEeccCCcccCCCC-CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhh
Q 018244          192 --DVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL  268 (359)
Q Consensus       192 --~~~~kl~DFg~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~  268 (359)
                        ++.+||+|||++...... ....||+.|+|||++.+..++.++||||||+++|+|++|..||................
T Consensus       171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  250 (339)
T 1z57_A          171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL  250 (339)
T ss_dssp             ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH
T ss_pred             ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence              678999999999875543 45578999999999998899999999999999999999999987653322111100000


Q ss_pred             c-------------------------------------cc-cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          269 T-------------------------------------DS-CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       269 ~-------------------------------------~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .                                     .+ ..........++++.+|+.+||+.||++|||+.+++++
T Consensus       251 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  329 (339)
T 1z57_A          251 GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH  329 (339)
T ss_dssp             CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence            0                                     00 00011234567889999999999999999999999864

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2e-45  Score=343.21  Aligned_cols=247  Identities=18%  Similarity=0.194  Sum_probs=196.0

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeC----------
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG----------  125 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----------  125 (359)
                      ..|.+++.||+|+||+||+|.. .+|+.||||++.....    ...+|+++|+.++||||+++++++...          
T Consensus         7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~   82 (383)
T 3eb0_A            7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP   82 (383)
T ss_dssp             TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred             ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence            4688889999999999999984 5789999999875432    224699999999999999999998543          


Q ss_pred             ----------------------------CcceEEEecCCCCCHhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 018244          126 ----------------------------DERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKE  175 (359)
Q Consensus       126 ----------------------------~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~  175 (359)
                                                  ...++||||+++ +|.+.+..  .....+++..+..++.||+.||.|||+. 
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-  160 (383)
T 3eb0_A           83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL-  160 (383)
T ss_dssp             ---------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-
T ss_pred             ccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence                                        348899999985 77777653  2456799999999999999999999999 


Q ss_pred             CcccccCCCCCeeeC-CCCCeEEeccCCcccCCCC---CCcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCC
Q 018244          176 RALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKH  250 (359)
Q Consensus       176 ~ivH~Dikp~NIll~-~~~~~kl~DFg~a~~~~~~---~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~  250 (359)
                      ||+||||||+|||++ .++.+||+|||+++.....   ....+|+.|+|||.+.+.. ++.++||||+|+++|+|++|+.
T Consensus       161 gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~  240 (383)
T 3eb0_A          161 GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP  240 (383)
T ss_dssp             TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCC
Confidence            999999999999998 6889999999999865433   3456789999999988754 8999999999999999999999


Q ss_pred             CCCcchhHHHhhhhhhhhcc-----------------------ccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 018244          251 IPPSHALDLIRDRNIQTLTD-----------------------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV  307 (359)
Q Consensus       251 p~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il  307 (359)
                      ||..................                       ......++...+.++.+|+.+||+.||++|||+.+++
T Consensus       241 pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  320 (383)
T 3eb0_A          241 LFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAM  320 (383)
T ss_dssp             SSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence            98765332222111110000                       0001112344667899999999999999999999998


Q ss_pred             HH
Q 018244          308 TA  309 (359)
Q Consensus       308 ~~  309 (359)
                      ++
T Consensus       321 ~h  322 (383)
T 3eb0_A          321 AH  322 (383)
T ss_dssp             TS
T ss_pred             cC
Confidence            64

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=3.4e-45  Score=337.10  Aligned_cols=252  Identities=16%  Similarity=0.160  Sum_probs=205.2

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCch-----------------HHHHHHHHHHHhcCCCcccccc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD-----------------ARQFLEEARAVGQLRNRRLANL  118 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~niv~~  118 (359)
                      ..+|.+++.||+|+||.||+|.. ++..||||.+.......                 .+.+.+|+++++.++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            35788999999999999999999 88999999987432111                 1788999999999999999999


Q ss_pred             cceeeeCCcceEEEecCCCCCHhhh------hhcCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCCCeeeCC
Q 018244          119 LGCCCEGDERLLVAEYMPNDTLAKH------LFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDD  191 (359)
Q Consensus       119 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~ivH~Dikp~NIll~~  191 (359)
                      ++++...+..++||||+++|+|.++      +.......+++..++.++.|++.||.|||+ . +++|+||||+||+++.
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~i~H~dl~p~Nil~~~  187 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK-NICHRDVKPSNILMDK  187 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS-CEECCCCCGGGEEECT
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC-CEeecCCChHhEEEcC
Confidence            9999999999999999999999998      654336789999999999999999999999 8 9999999999999999


Q ss_pred             CCCeEEeccCCcccCCCC--CCcCCCccccCcccccCC-CCCC-ccchhhHHHHHHHHHhCCCCCCcchh-HHHhhhhhh
Q 018244          192 DVNPRLSCFGLMKNSRDG--RSYSTNLAFTPPEYLRTG-RVTP-ESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNIQ  266 (359)
Q Consensus       192 ~~~~kl~DFg~a~~~~~~--~~~~~t~~y~aPE~~~~~-~~~~-~~Di~slG~il~elltg~~p~~~~~~-~~~~~~~~~  266 (359)
                      ++.+||+|||++......  ....+|..|+|||.+.+. .++. ++||||||+++|+|++|..||..... .........
T Consensus       188 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~  267 (348)
T 2pml_X          188 NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRT  267 (348)
T ss_dssp             TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTS
T ss_pred             CCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhc
Confidence            999999999999875443  345688999999999877 5666 99999999999999999999875432 111111111


Q ss_pred             hhcc-cccc------------CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          267 TLTD-SCLE------------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       267 ~~~~-~~~~------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .... +...            .......+.++.+|+.+||+.||++|||+.+++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h  323 (348)
T 2pml_X          268 KNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH  323 (348)
T ss_dssp             CCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             cCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            0000 0000            00013466789999999999999999999999873

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=5.2e-45  Score=338.24  Aligned_cols=248  Identities=19%  Similarity=0.197  Sum_probs=202.1

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc--------hHHHHHHHHHHHhcC-CCcccccccceeeeCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP--------DARQFLEEARAVGQL-RNRRLANLLGCCCEGD  126 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~  126 (359)
                      ..|.+.+.||.|+||.||+|... +|..||||++......        ..+.+.+|+.+++.+ +||||+++++++....
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  173 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS  173 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence            45788888999999999999964 7899999998754321        134578899999999 7999999999999999


Q ss_pred             cceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      ..++||||+++++|.+++..  ...+++..+..++.||+.||.|||+. |++|+||||+||+++.++.+||+|||++...
T Consensus       174 ~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~-gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~  250 (365)
T 2y7j_A          174 FMFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHAN-NIVHRDLKPENILLDDNMQIRLSDFGFSCHL  250 (365)
T ss_dssp             EEEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence            99999999999999999973  45699999999999999999999999 9999999999999999999999999998876


Q ss_pred             CCC---CCcCCCccccCcccccC------CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCC
Q 018244          207 RDG---RSYSTNLAFTPPEYLRT------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF  277 (359)
Q Consensus       207 ~~~---~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (359)
                      ...   ....||+.|+|||++.+      ..++.++||||||+++|+|++|..||.....................  ..
T Consensus       251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~  328 (365)
T 2y7j_A          251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSS--PE  328 (365)
T ss_dssp             CTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCH--HH
T ss_pred             CCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC--cc
Confidence            543   34568999999998863      35889999999999999999999998764332222111111000000  00


Q ss_pred             ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ....+..+.+|+.+||+.||++|||+.+++++
T Consensus       329 ~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  360 (365)
T 2y7j_A          329 WDDRSSTVKDLISRLLQVDPEARLTAEQALQH  360 (365)
T ss_dssp             HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            01345679999999999999999999999873

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=3.9e-46  Score=349.20  Aligned_cols=251  Identities=14%  Similarity=0.162  Sum_probs=200.7

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC--------Ccccccccceee----
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR--------NRRLANLLGCCC----  123 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~~~~~~~----  123 (359)
                      ..|.+++.||+|+||+||+|.. .++..||||++.... ...+.+.+|+.+++.++        |+||+++++++.    
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~  115 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV  115 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred             CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence            5688999999999999999984 568899999997542 33567889999999985        788999999987    


Q ss_pred             eCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC----------
Q 018244          124 EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----------  193 (359)
Q Consensus       124 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~----------  193 (359)
                      .....++||||+ +++|.+++.......+++..++.++.||+.||.|||++.+|+||||||+|||++.++          
T Consensus       116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~  194 (397)
T 1wak_A          116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEA  194 (397)
T ss_dssp             TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred             CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhh
Confidence            456799999999 557777776555567999999999999999999999854899999999999999775          


Q ss_pred             ---------------------------------------CeEEeccCCcccCCCC-CCcCCCccccCcccccCCCCCCcc
Q 018244          194 ---------------------------------------NPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPES  233 (359)
Q Consensus       194 ---------------------------------------~~kl~DFg~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~  233 (359)
                                                             .+||+|||++...... ....||+.|+|||++.+..++.++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  274 (397)
T 1wak_A          195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA  274 (397)
T ss_dssp             C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHH
T ss_pred             HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHH
Confidence                                                   8999999999865443 345789999999999998999999


Q ss_pred             chhhHHHHHHHHHhCCCCCCcchhHHH-----hhhhhhhhccc-------------------------------------
Q 018244          234 VMYSFGTLLLDLLSGKHIPPSHALDLI-----RDRNIQTLTDS-------------------------------------  271 (359)
Q Consensus       234 Di~slG~il~elltg~~p~~~~~~~~~-----~~~~~~~~~~~-------------------------------------  271 (359)
                      |||||||++|+|++|+.||........     ...........                                     
T Consensus       275 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (397)
T 1wak_A          275 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL  354 (397)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHH
T ss_pred             HHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhh
Confidence            999999999999999999864321100     00000000000                                     


Q ss_pred             cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       272 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ......+...+..+.+|+.+||+.||++|||+.+++++
T Consensus       355 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  392 (397)
T 1wak_A          355 VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH  392 (397)
T ss_dssp             HHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred             hhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence            00012345678899999999999999999999999863

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=6.2e-45  Score=328.14  Aligned_cols=250  Identities=18%  Similarity=0.153  Sum_probs=205.5

Q ss_pred             cCCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---------chHHHHHHHHHHHhcCC-Cccccccccee
Q 018244           54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---------PDARQFLEEARAVGQLR-NRRLANLLGCC  122 (359)
Q Consensus        54 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---------~~~~~~~~e~~~l~~l~-h~niv~~~~~~  122 (359)
                      ..+..|.+++.||+|+||.||+|.. .+++.||||++.....         ...+.+.+|+++++.+. ||||+++++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            3467889999999999999999996 4688999999975431         11345788999999996 99999999999


Q ss_pred             eeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCC
Q 018244          123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (359)
Q Consensus       123 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~  202 (359)
                      ......++||||+++++|.+++..  ...+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||+
T Consensus        94 ~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~  170 (298)
T 1phk_A           94 ETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKL-NIVHRDLKPENILLDDDMNIKLTDFGF  170 (298)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             ccCCeEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEEcCCCcEEEecccc
Confidence            999999999999999999999973  45799999999999999999999999 999999999999999999999999999


Q ss_pred             cccCCCC---CCcCCCccccCccccc------CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccc
Q 018244          203 MKNSRDG---RSYSTNLAFTPPEYLR------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL  273 (359)
Q Consensus       203 a~~~~~~---~~~~~t~~y~aPE~~~------~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  273 (359)
                      +......   ....+|+.|+|||++.      ...++.++||||||+++|+|++|..||..................  .
T Consensus       171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~  248 (298)
T 1phk_A          171 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ--F  248 (298)
T ss_dssp             CEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--C
T ss_pred             hhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcc--c
Confidence            9875543   2446789999999885      456889999999999999999999988765433322211111110  1


Q ss_pred             cCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                      ........+..+.+|+.+||+.||++|||+.++++
T Consensus       249 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          249 GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            11112356778999999999999999999999986

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=4.2e-45  Score=338.42  Aligned_cols=257  Identities=15%  Similarity=0.195  Sum_probs=196.5

Q ss_pred             HHHHHHhcCCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc-----------hHHHHHHHHHHHhcCCCccc
Q 018244           47 ETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP-----------DARQFLEEARAVGQLRNRRL  115 (359)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~ni  115 (359)
                      .++....   ..|.+++.||+|+||.||+|...++..||||++......           ..+.+.+|+++++.++||||
T Consensus        15 ~~~~~~~---~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   91 (362)
T 3pg1_A           15 AELHAMQ---SPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI   91 (362)
T ss_dssp             HHHHHTT---CSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             HHHHHhc---cceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence            4444444   456677888999999999999878999999999653221           13678999999999999999


Q ss_pred             ccccceeeeC-----CcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC
Q 018244          116 ANLLGCCCEG-----DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD  190 (359)
Q Consensus       116 v~~~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~  190 (359)
                      +++++++...     ...++||||+. |+|.+++.. ....+++..+..++.||+.||.|||++ +++|+||||+||+++
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~  168 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEA-GVVHRDLHPGNILLA  168 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEC
T ss_pred             cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-cCEecCCChHHEEEc
Confidence            9999998543     35799999997 588888864 455799999999999999999999999 999999999999999


Q ss_pred             CCCCeEEeccCCcccCCCC---CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh
Q 018244          191 DDVNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ  266 (359)
Q Consensus       191 ~~~~~kl~DFg~a~~~~~~---~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~  266 (359)
                      .++.+||+|||++......   ....+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||..............
T Consensus       169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~  248 (362)
T 3pg1_A          169 DNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVE  248 (362)
T ss_dssp             TTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            9999999999999754433   34567899999999887 6689999999999999999999999876543222211111


Q ss_pred             hhcc-------------------ccccC-------CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          267 TLTD-------------------SCLEG-------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       267 ~~~~-------------------~~~~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ....                   .....       ......++.+.+|+.+||+.||++|||+.+++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             HHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence            0000                   00000       0112345779999999999999999999999874

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=1.6e-44  Score=345.26  Aligned_cols=254  Identities=17%  Similarity=0.182  Sum_probs=206.0

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCC-cccccccceeeeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN-RRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ..|.+++.||+|+||.||+|.. .++..||||++.....  ...+.+|+++++.++| +++..+..++...+..+|||||
T Consensus         7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~   84 (483)
T 3sv0_A            7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL   84 (483)
T ss_dssp             TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence            4688999999999999999995 5788999998875443  2357889999999986 5566666677778889999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee---CCCCCeEEeccCCcccCCCCC-
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDGR-  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll---~~~~~~kl~DFg~a~~~~~~~-  210 (359)
                      + +++|.+++.. ....+++..++.|+.||+.||.|||++ +|+||||||+||||   +.++.+||+|||+++...... 
T Consensus        85 ~-g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~  161 (483)
T 3sv0_A           85 L-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST  161 (483)
T ss_dssp             C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             C-CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence            9 8899999964 356799999999999999999999999 99999999999999   588999999999998654432 


Q ss_pred             ----------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhH-------HHhhhhhhhhccccc
Q 018244          211 ----------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-------LIRDRNIQTLTDSCL  273 (359)
Q Consensus       211 ----------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~-------~~~~~~~~~~~~~~~  273 (359)
                                ...||..|+|||++.+..++.++||||||+++|+|++|+.||......       .+...........  
T Consensus       162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~--  239 (483)
T 3sv0_A          162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEA--  239 (483)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHH--
T ss_pred             ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHH--
Confidence                      456899999999999999999999999999999999999998753211       1111111111110  


Q ss_pred             cCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccCC
Q 018244          274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVS  320 (359)
Q Consensus       274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~  320 (359)
                         ....++.++.+|+..||+.||++||++.+|++.|+.+.......
T Consensus       240 ---l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~  283 (483)
T 3sv0_A          240 ---LCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQ  283 (483)
T ss_dssp             ---HHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred             ---HhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCC
Confidence               01234568999999999999999999999999999987655433

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=5.6e-45  Score=327.06  Aligned_cols=250  Identities=18%  Similarity=0.185  Sum_probs=189.4

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCch--HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ..+|++++.||+|+||+||+|.. .+++.||+|++.......  .+.+.++...++.++||||+++++++...+..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            35788999999999999999995 578899999998653322  223445556688889999999999999999999999


Q ss_pred             ecCCCCCHhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          133 EYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       133 e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      ||+++ +|.+++..  .....+++..++.++.|++.||.|||++.+++|+||||+||+++.++.+||+|||++.......
T Consensus        86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  164 (290)
T 3fme_A           86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV  164 (290)
T ss_dssp             ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC----------
T ss_pred             ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccc
Confidence            99975 88877753  1456799999999999999999999984489999999999999999999999999997654432


Q ss_pred             ---CcCCCccccCcccc----cCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          211 ---SYSTNLAFTPPEYL----RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       211 ---~~~~t~~y~aPE~~----~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                         ...+|+.|+|||++    .+..++.++||||||+++|+|++|+.||..........   ................+.
T Consensus       165 ~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  241 (290)
T 3fme_A          165 AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL---KQVVEEPSPQLPADKFSA  241 (290)
T ss_dssp             -----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHH---HHHHHSCCCCCCTTTSCH
T ss_pred             cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHH---HHHhccCCCCcccccCCH
Confidence               34688999999996    45568999999999999999999999886432211111   111111111122345677


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ++.+++.+||+.||++|||+.+++++
T Consensus       242 ~~~~li~~~l~~~p~~Rpt~~e~l~h  267 (290)
T 3fme_A          242 EFVDFTSQCLKKNSKERPTYPELMQH  267 (290)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHHHHhhcChhhCcCHHHHHhC
Confidence            89999999999999999999999874

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=1.6e-44  Score=325.78  Aligned_cols=246  Identities=19%  Similarity=0.253  Sum_probs=194.2

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeee-----------
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE-----------  124 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----------  124 (359)
                      .+|++++.||+|+||.||+|.. .++..||||.+.... ...+.+.+|+.+++.++||||+++++++.+           
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            3578888999999999999995 478899999996432 335678899999999999999999998865           


Q ss_pred             --CCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCC
Q 018244          125 --GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (359)
Q Consensus       125 --~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~  202 (359)
                        ....++||||+++|+|.+++.. ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||+
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~  162 (303)
T 1zy4_A           85 KKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQ-GIIHRDLKPMNIFIDESRNVKIGDFGL  162 (303)
T ss_dssp             -CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred             ccCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhC-CeecccCCHHhEEEcCCCCEEEeeCcc
Confidence              3467999999999999999975 345678899999999999999999999 999999999999999999999999999


Q ss_pred             cccCCCC------------------CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhh
Q 018244          203 MKNSRDG------------------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR  263 (359)
Q Consensus       203 a~~~~~~------------------~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~  263 (359)
                      +......                  ....+|+.|+|||.+.+. .++.++||||||+++|+|++   |+...........
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~  239 (303)
T 1zy4_A          163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILK  239 (303)
T ss_dssp             CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred             hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHH
Confidence            8765421                  234578899999999865 68999999999999999998   3433211111111


Q ss_pred             hhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          264 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .... ........++...+..+.+++.+||+.||++|||+.+++++
T Consensus       240 ~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          240 KLRS-VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             HHHS-TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             hccc-cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence            1111 11112233445567789999999999999999999999873

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=4.3e-45  Score=332.12  Aligned_cols=248  Identities=17%  Similarity=0.229  Sum_probs=193.5

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceee------------
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCC------------  123 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~------------  123 (359)
                      ..|.+++.||+|+||.||+|... +++.||+|++........+.+.+|+++++.++||||+++++++.            
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   90 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS   90 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence            56889999999999999999965 58899999998766555678899999999999999999998873            


Q ss_pred             --eCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC-CCCCeEEecc
Q 018244          124 --EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCF  200 (359)
Q Consensus       124 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~-~~~~~kl~DF  200 (359)
                        .....++||||+. |+|.+++   ....+++..++.++.|++.||+|||++ +++|+||||+||+++ +++.+||+||
T Consensus        91 ~~~~~~~~lv~e~~~-~~L~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~kl~Df  165 (320)
T 2i6l_A           91 LTELNSVYIVQEYME-TDLANVL---EQGPLLEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANLFINTEDLVLKIGDF  165 (320)
T ss_dssp             CCSCSEEEEEEECCS-EEHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred             ccccCceeEEeeccC-CCHHHHh---hcCCccHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCeEEEccC
Confidence              3467899999997 5999998   446799999999999999999999999 999999999999997 5679999999


Q ss_pred             CCcccCCCC-------CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhc---
Q 018244          201 GLMKNSRDG-------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT---  269 (359)
Q Consensus       201 g~a~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~---  269 (359)
                      |++......       ....+|..|+|||.+.+ ..++.++||||||+++|+|++|+.||.................   
T Consensus       166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  245 (320)
T 2i6l_A          166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVH  245 (320)
T ss_dssp             TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCC
T ss_pred             ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence            999865432       23346889999998875 6689999999999999999999999876533222111111000   


Q ss_pred             ---------------ccccc-CC-----CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          270 ---------------DSCLE-GQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       270 ---------------~~~~~-~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                     ..... ..     .....+.++.+|+.+||+.||++|||+.+++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          246 EEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH  306 (320)
T ss_dssp             HHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             hhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence                           00000 00     112356789999999999999999999999874

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=1e-44  Score=330.82  Aligned_cols=251  Identities=18%  Similarity=0.203  Sum_probs=200.4

Q ss_pred             CcccccccCCCCCCcEEEEEEe--CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcC---CCcccccccceee-----e
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQL---RNRRLANLLGCCC-----E  124 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l---~h~niv~~~~~~~-----~  124 (359)
                      ..|.+++.||+|+||.||+|..  .++..||+|++......  ....+.+|+.+++.+   +||||+++++++.     .
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~   90 (326)
T 1blx_A           11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   90 (326)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred             hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence            4688999999999999999996  46788999998743221  123456677776666   8999999999987     4


Q ss_pred             CCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                      ....++||||+. |+|.+++.......+++..++.++.|++.||.|||++ |++|+||||+||+++.++.+||+|||++.
T Consensus        91 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-gi~H~dlkp~Nili~~~~~~kl~Dfg~~~  168 (326)
T 1blx_A           91 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLAR  168 (326)
T ss_dssp             EEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             CceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHHHeEEcCCCCEEEecCcccc
Confidence            567899999997 5999999765566799999999999999999999999 99999999999999999999999999998


Q ss_pred             cCCCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccc----------
Q 018244          205 NSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS----------  271 (359)
Q Consensus       205 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~----------  271 (359)
                      .....   ....+|..|+|||++.+..++.++||||||+++|+|++|+.||..................+          
T Consensus       169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  248 (326)
T 1blx_A          169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA  248 (326)
T ss_dssp             CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred             cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccc
Confidence            65432   34567899999999998899999999999999999999999987654322221111100000          


Q ss_pred             -----------cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          272 -----------CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       272 -----------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                 ..........+..+.+|+.+||+.||++|||+.+++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  297 (326)
T 1blx_A          249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  297 (326)
T ss_dssp             SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             cchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                       00011223466789999999999999999999999864

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=2.1e-44  Score=357.11  Aligned_cols=252  Identities=20%  Similarity=0.266  Sum_probs=207.7

Q ss_pred             CcccccccCCCCCCcEEEEEEeC----CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      ..|.+.+.||+|+||.||+|...    .+..||+|.+...... ..+.+.+|+.+++.++||||+++++++. .+..++|
T Consensus       390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv  468 (656)
T 2j0j_A          390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII  468 (656)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEE
Confidence            56788889999999999999863    2467999998765433 2467899999999999999999999985 4678999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-  210 (359)
                      |||+++|+|.+++.. ....+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||+++...... 
T Consensus       469 ~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~  546 (656)
T 2j0j_A          469 MELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY  546 (656)
T ss_dssp             EECCTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred             EEcCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence            999999999999975 345689999999999999999999999 99999999999999999999999999998765432 


Q ss_pred             ----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       211 ----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                          ...+|+.|+|||++.+..++.++||||||+++|||++ |..||..............     ......+...+..+
T Consensus       547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l  621 (656)
T 2j0j_A          547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-----GERLPMPPNCPPTL  621 (656)
T ss_dssp             -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHH-----TCCCCCCTTCCHHH
T ss_pred             eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-----CCCCCCCccccHHH
Confidence                2345678999999998899999999999999999997 8888776543322221111     11223445667889


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          286 VRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      .+|+.+||+.||++|||+.++++.|+.+...
T Consensus       622 ~~li~~~l~~dP~~RPs~~el~~~L~~il~~  652 (656)
T 2j0j_A          622 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE  652 (656)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence            9999999999999999999999999988653

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=1.9e-44  Score=335.15  Aligned_cols=247  Identities=15%  Similarity=0.199  Sum_probs=196.3

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcc-----
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDER-----  128 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-----  128 (359)
                      ..|.+.+.||+|+||+||+|.. .+|..||||++......  ..+.+.+|+.+++.++||||+++++++...+..     
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  121 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  121 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence            4678888899999999999985 46889999999865433  246788999999999999999999999877655     


Q ss_pred             -eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          129 -LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       129 -~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                       ++||||+. ++|.+++.    ..+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||+++...
T Consensus       122 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~  195 (371)
T 4exu_A          122 FYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLARHAD  195 (371)
T ss_dssp             CEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred             EEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence             99999997 58888773    3499999999999999999999999 99999999999999999999999999998665


Q ss_pred             CC-CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhh-----------------
Q 018244          208 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL-----------------  268 (359)
Q Consensus       208 ~~-~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~-----------------  268 (359)
                      .. ....+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||................                 
T Consensus       196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  275 (371)
T 4exu_A          196 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK  275 (371)
T ss_dssp             ----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHH
T ss_pred             cCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhh
Confidence            43 34578999999999987 678999999999999999999999987653322211111100                 


Q ss_pred             --ccccccC------CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          269 --TDSCLEG------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       269 --~~~~~~~------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                        .......      ......++++.+|+.+||+.||++|||+.+++++
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             HHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             hhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence              0000000      0012346789999999999999999999999875

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=6.4e-45  Score=343.69  Aligned_cols=246  Identities=22%  Similarity=0.230  Sum_probs=193.3

Q ss_pred             cccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeC------CcceE
Q 018244           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DERLL  130 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~l  130 (359)
                      .|.+++.||+|+||+||+|... ++..||||++.....    ...+|+++|+.++||||+++++++...      ..+++
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l  130 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL  130 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence            5888899999999999999964 689999999875432    234699999999999999999988542      23679


Q ss_pred             EEecCCCCCHhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC-CCeEEeccCCcccCC
Q 018244          131 VAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSR  207 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~-~~~kl~DFg~a~~~~  207 (359)
                      ||||+++ +|.+.+..  .....+++..+..++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||+++...
T Consensus       131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~  208 (420)
T 1j1b_A          131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV  208 (420)
T ss_dssp             EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence            9999986 67666542  2456799999999999999999999999 99999999999999955 568999999998654


Q ss_pred             CC---CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhc----------ccc-
Q 018244          208 DG---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT----------DSC-  272 (359)
Q Consensus       208 ~~---~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~----------~~~-  272 (359)
                      ..   ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||...............+.          .+. 
T Consensus       209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~  288 (420)
T 1j1b_A          209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY  288 (420)
T ss_dssp             TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCC
T ss_pred             cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence            33   345789999999999765 689999999999999999999999976532221111111000          000 


Q ss_pred             ----c--------cCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          273 ----L--------EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       273 ----~--------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                          .        ...++...+.++.+|+.+||+.||++|||+.+++++
T Consensus       289 ~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             CCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence                0        000223456789999999999999999999999875

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=5.3e-45  Score=341.48  Aligned_cols=247  Identities=19%  Similarity=0.220  Sum_probs=194.1

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCc------ceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE------RLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------~~l  130 (359)
                      ..|.+++.||+|+||+||+|....+..+|+|++......    ..+|+++++.++||||+++++++.....      .++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            468899999999999999999876667999988654321    2369999999999999999999965443      789


Q ss_pred             EEecCCCCCHhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC-CCCCeEEeccCCcccCC
Q 018244          131 VAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~-~~~~~kl~DFg~a~~~~  207 (359)
                      ||||++++ +.+.+..  .....+++..++.++.||+.||.|||+. +|+||||||+|||++ .++.+||+|||+++...
T Consensus       116 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~  193 (394)
T 4e7w_A          116 VLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI-GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI  193 (394)
T ss_dssp             EEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             EeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence            99999875 4443321  1356799999999999999999999999 999999999999999 79999999999998754


Q ss_pred             CC---CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhh---------------
Q 018244          208 DG---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL---------------  268 (359)
Q Consensus       208 ~~---~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~---------------  268 (359)
                      ..   ....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||................               
T Consensus       194 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~  273 (394)
T 4e7w_A          194 AGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNY  273 (394)
T ss_dssp             TTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGG
T ss_pred             CCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence            33   355789999999998765 48999999999999999999999998654322211111100               


Q ss_pred             cccc--------ccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          269 TDSC--------LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       269 ~~~~--------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ....        ....++...++++.+|+.+||+.||++|||+.+++++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          274 MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             SSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             hhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence            0000        0001223356789999999999999999999999975

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=3.8e-45  Score=333.45  Aligned_cols=247  Identities=15%  Similarity=0.169  Sum_probs=194.9

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--------chHHHHHHHHHHHhcCCCcccccccceeeeCCc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--------PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE  127 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  127 (359)
                      ..|.+++.||+|+||.||+|.. .++..||||++.....        .....+.+|+++|+.++||||+++++++... .
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-D   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-S
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-c
Confidence            3688899999999999999995 4688999999975421        1123478999999999999999999998665 4


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCC---eEEeccCCcc
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLMK  204 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~---~kl~DFg~a~  204 (359)
                      .++||||+++++|.+++.  ....+++..+..++.||+.||.|||++ +++|+||||+||+++.++.   +||+|||++.
T Consensus        89 ~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  165 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  165 (322)
T ss_dssp             EEEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred             eEEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence            899999999999999886  456799999999999999999999999 9999999999999987654   9999999998


Q ss_pred             cCCCCC---CcCCCccccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHH-HhhhhhhhhccccccCCC
Q 018244          205 NSRDGR---SYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQF  277 (359)
Q Consensus       205 ~~~~~~---~~~~t~~y~aPE~~~---~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~  277 (359)
                      ......   ...||+.|+|||++.   ...++.++||||||+++|+|++|..||....... ...........  .....
T Consensus       166 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~  243 (322)
T 2ycf_A          166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN--FIPEV  243 (322)
T ss_dssp             ECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCC--CCHHH
T ss_pred             ecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccc--cCchh
Confidence            765542   345789999999974   4568999999999999999999999886542211 11000000000  00000


Q ss_pred             ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ....+.++.+|+.+||+.||++|||+.+++++
T Consensus       244 ~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h  275 (322)
T 2ycf_A          244 WAEVSEKALDLVKKLLVVDPKARFTTEEALRH  275 (322)
T ss_dssp             HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence            12346789999999999999999999999863

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=1.5e-44  Score=333.46  Aligned_cols=248  Identities=15%  Similarity=0.193  Sum_probs=198.1

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeC-----Ccce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~  129 (359)
                      ..|.+.+.||+|+||.||+|... +|..||||++...... ....+.+|+++++.++||||+++++++...     ...+
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   90 (353)
T 2b9h_A           11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY   90 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred             cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence            46888899999999999999954 6889999999754332 345678999999999999999999988654     6789


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      +||||+. ++|.+++..   ..+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++......
T Consensus        91 lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~  165 (353)
T 2b9h_A           91 IIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGS-NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES  165 (353)
T ss_dssp             EEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred             EEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence            9999997 589998853   5699999999999999999999999 9999999999999999999999999999865422


Q ss_pred             --------------CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhh-------
Q 018244          210 --------------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT-------  267 (359)
Q Consensus       210 --------------~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~-------  267 (359)
                                    ....||+.|+|||++.+ ..++.++||||||+++|+|++|..||...............       
T Consensus       166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  245 (353)
T 2b9h_A          166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD  245 (353)
T ss_dssp             --------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCST
T ss_pred             cccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchh
Confidence                          12357899999998765 67899999999999999999999998765432211111000       


Q ss_pred             -------------hcccccc-C-----CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          268 -------------LTDSCLE-G-----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       268 -------------~~~~~~~-~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                   ....... .     ......+.++.+|+.+||+.||++|||+.+++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (353)
T 2b9h_A          246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH  306 (353)
T ss_dssp             TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence                         0000000 0     0012456789999999999999999999999874

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=2.9e-44  Score=332.45  Aligned_cols=251  Identities=17%  Similarity=0.200  Sum_probs=187.7

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCc-------
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE-------  127 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-------  127 (359)
                      +..|.+.+.||+|+||+||+|.. .++..||||++..... ......++++.+..++||||+++++++.....       
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  100 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIY  100 (360)
T ss_dssp             HTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccccee
Confidence            45778888999999999999996 4688999999865432 23456778888899999999999999976443       


Q ss_pred             ceEEEecCCCCCHhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHhh--cCCCcccccCCCCCeeeCC-CCCeEEeccCC
Q 018244          128 RLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCT--SKERALYHDLNAYRIVFDD-DVNPRLSCFGL  202 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH--~~~~ivH~Dikp~NIll~~-~~~~kl~DFg~  202 (359)
                      .++||||+.+ +|...+..  .....+++..+..++.|++.||.|||  +. +|+||||||+|||++. ++.+||+|||+
T Consensus       101 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~-~ivH~Dlkp~NIll~~~~~~~kl~Dfg~  178 (360)
T 3e3p_A          101 LNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGS  178 (360)
T ss_dssp             EEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT-CCBCSCCCGGGEEEETTTTEEEECCCTT
T ss_pred             EEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC-CeecCcCCHHHEEEeCCCCcEEEeeCCC
Confidence            7899999987 55554432  25567899999999999999999999  88 9999999999999996 89999999999


Q ss_pred             cccCCCCC---CcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccc-------
Q 018244          203 MKNSRDGR---SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS-------  271 (359)
Q Consensus       203 a~~~~~~~---~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~-------  271 (359)
                      +.......   ...+|+.|+|||++.+.. ++.++||||||+++|+|++|+.||..................+       
T Consensus       179 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (360)
T 3e3p_A          179 AKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRK  258 (360)
T ss_dssp             CBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred             ceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHh
Confidence            98765433   456799999999987654 8999999999999999999999987654332222211100000       


Q ss_pred             -------------------cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          272 -------------------CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       272 -------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                         ..........+.++.+|+.+||+.||++|||+.+++++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          259 LNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH  315 (360)
T ss_dssp             HCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             cccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence                               00011122357889999999999999999999999975

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=6.4e-44  Score=332.98  Aligned_cols=252  Identities=17%  Similarity=0.153  Sum_probs=199.8

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-Cc-----ccccccceeeeCCcc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NR-----RLANLLGCCCEGDER  128 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~~~~~~~~~~~~  128 (359)
                      ...|.+++.||+|+||+||+|.. .++..||||++.... .....+.+|+.++..++ |+     +|+++++++...+..
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  131 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL  131 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence            35788899999999999999985 468899999997532 23456778888888875 44     499999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCCCeeeC--CCCCeEEeccCCccc
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFD--DDVNPRLSCFGLMKN  205 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~ivH~Dikp~NIll~--~~~~~kl~DFg~a~~  205 (359)
                      +|||||+.+ +|.+++.......+++..+..++.|++.||.|||+ ..+|+||||||+|||++  .++.+||+|||+++.
T Consensus       132 ~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~  210 (382)
T 2vx3_A          132 CLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ  210 (382)
T ss_dssp             EEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             EEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence            999999965 99999986555679999999999999999999995 23999999999999995  478899999999987


Q ss_pred             CCCC-CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhh----------------
Q 018244          206 SRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL----------------  268 (359)
Q Consensus       206 ~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~----------------  268 (359)
                      .... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||................                
T Consensus       211 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  290 (382)
T 2vx3_A          211 LGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARK  290 (382)
T ss_dssp             TTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHH
T ss_pred             cccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHH
Confidence            6543 45678999999999999999999999999999999999999987653322211111100                


Q ss_pred             -cccccc-----------------------------------------CCCChHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 018244          269 -TDSCLE-----------------------------------------GQFSSDEGTELVRLASRCLQYEPRERPNPRSL  306 (359)
Q Consensus       269 -~~~~~~-----------------------------------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i  306 (359)
                       ......                                         .........++.+|+.+||+.||++|||+.++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~  370 (382)
T 2vx3_A          291 FFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYA  370 (382)
T ss_dssp             HEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred             HHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHH
Confidence             000000                                         00011234589999999999999999999999


Q ss_pred             HHH
Q 018244          307 VTA  309 (359)
Q Consensus       307 l~~  309 (359)
                      +++
T Consensus       371 L~h  373 (382)
T 2vx3_A          371 LQH  373 (382)
T ss_dssp             TTS
T ss_pred             hcC
Confidence            863

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=1.1e-44  Score=332.35  Aligned_cols=247  Identities=15%  Similarity=0.150  Sum_probs=174.7

Q ss_pred             ccccccc-CCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeee----CCcceEE
Q 018244           58 MENIVSE-HGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLV  131 (359)
Q Consensus        58 ~~~~~~~-lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv  131 (359)
                      +|.++++ ||+|+||+||+|... +++.||||++....    ....+....++.+.||||+++++++..    ....++|
T Consensus        29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv  104 (336)
T 3fhr_A           29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLII  104 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEE
Confidence            6777654 899999999999964 68899999996532    222223344666799999999999976    4458999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC---CCCeEEeccCCcccCCC
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~---~~~~kl~DFg~a~~~~~  208 (359)
                      |||+++|+|.+++.......+++..++.++.|++.||.|||++ +++||||||+||+++.   ++.+||+|||++.....
T Consensus       105 ~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~-~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~  183 (336)
T 3fhr_A          105 MECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH-NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ  183 (336)
T ss_dssp             EECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred             EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence            9999999999999865556799999999999999999999999 9999999999999986   45599999999986554


Q ss_pred             C--CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccc--cccCCCChHHHHH
Q 018244          209 G--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS--CLEGQFSSDEGTE  284 (359)
Q Consensus       209 ~--~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  284 (359)
                      .  ....+|+.|+|||++.+..++.++||||||+++|+|++|..||...................  ..........+.+
T Consensus       184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (336)
T 3fhr_A          184 NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSED  263 (336)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHH
T ss_pred             cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHH
Confidence            3  34567899999999988889999999999999999999999986554332211111111111  1111122356788


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          285 LVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       285 l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+|+.+||+.||++|||+.+++++
T Consensus       264 ~~~li~~~L~~dP~~Rpt~~ell~h  288 (336)
T 3fhr_A          264 AKQLIRLLLKTDPTERLTITQFMNH  288 (336)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHHCCCChhHCcCHHHHhcC
Confidence            9999999999999999999999985

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=2e-44  Score=338.90  Aligned_cols=247  Identities=15%  Similarity=0.214  Sum_probs=181.0

Q ss_pred             ccccc-cCCCCCCcEEEEEEeC---CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeee--CCcceEEE
Q 018244           59 ENIVS-EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVA  132 (359)
Q Consensus        59 ~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~  132 (359)
                      |.+.+ +||+|+||+||+|...   ++..||||++.....  ...+.+|+.+|+.++||||+++++++..  ....++||
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~   99 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF   99 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence            55544 6899999999999964   578899999986543  3467899999999999999999999954  66899999


Q ss_pred             ecCCCCCHhhhhhcC-------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee----CCCCCeEEeccC
Q 018244          133 EYMPNDTLAKHLFHW-------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFG  201 (359)
Q Consensus       133 e~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll----~~~~~~kl~DFg  201 (359)
                      ||+.+ +|.+++...       ....+++..++.++.||+.||.|||++ +|+||||||+|||+    +.++.+||+|||
T Consensus       100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg  177 (405)
T 3rgf_A          100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMG  177 (405)
T ss_dssp             ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred             eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence            99975 788877521       223589999999999999999999999 99999999999999    678999999999


Q ss_pred             CcccCCCC-------CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHH---------hhhh
Q 018244          202 LMKNSRDG-------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI---------RDRN  264 (359)
Q Consensus       202 ~a~~~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~---------~~~~  264 (359)
                      +++.....       ....||+.|+|||++.+. .++.++|||||||++|+|++|..||.....+..         ....
T Consensus       178 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i  257 (405)
T 3rgf_A          178 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI  257 (405)
T ss_dssp             CCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHH
T ss_pred             CceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHH
Confidence            99865432       245679999999999874 489999999999999999999999864322100         0000


Q ss_pred             hhhh------------------------ccccccC--------CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          265 IQTL------------------------TDSCLEG--------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       265 ~~~~------------------------~~~~~~~--------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ...+                        .......        ......+.++.+|+.+||+.||++|||+.+++++
T Consensus       258 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h  334 (405)
T 3rgf_A          258 FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD  334 (405)
T ss_dssp             HHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            0000                        0000000        0001115678999999999999999999999985

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=8.6e-44  Score=328.59  Aligned_cols=247  Identities=15%  Similarity=0.192  Sum_probs=196.4

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCc------
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDE------  127 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------  127 (359)
                      ..|.+.+.||+|+||.||+|.. .+|..||||++......  ..+.+.+|+.+++.++||||+++++++.....      
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  103 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  103 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence            4678888899999999999995 46889999999765322  24568899999999999999999999987654      


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      .++||||+. ++|.+++.    ..+++..+..++.||+.||.|||++ +++|+||||+||+++.++.+||+|||++....
T Consensus       104 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  177 (353)
T 3coi_A          104 FYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLARHAD  177 (353)
T ss_dssp             CEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred             EEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence            499999997 58888773    2499999999999999999999999 99999999999999999999999999998755


Q ss_pred             CC-CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhh------------------
Q 018244          208 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT------------------  267 (359)
Q Consensus       208 ~~-~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~------------------  267 (359)
                      .. ....+|+.|+|||++.+ ..++.++||||||+++|+|++|..||...............                  
T Consensus       178 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  257 (353)
T 3coi_A          178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK  257 (353)
T ss_dssp             ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHH
T ss_pred             CCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHH
Confidence            43 34567999999999887 57899999999999999999999998764322211111100                  


Q ss_pred             -h---cccccc---CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          268 -L---TDSCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       268 -~---~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                       .   ......   .......+.++.+|+.+||+.||++|||+.+++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             HHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence             0   000000   11223567889999999999999999999999874

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=9.3e-44  Score=327.98  Aligned_cols=250  Identities=16%  Similarity=0.140  Sum_probs=201.3

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CC-cEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcc------cccccceeeeCCcc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQ-FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR------LANLLGCCCEGDER  128 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~~~  128 (359)
                      ..|++++.||+|+||+||+|... ++ ..||+|++.... ...+.+.+|+.+++.++|++      ++.+.+++......
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~   97 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM   97 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred             ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence            46889999999999999999853 34 689999997532 33566888999999998776      88999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee-------------------
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF-------------------  189 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll-------------------  189 (359)
                      ++||||+ +++|.+++.......+++..+..++.||+.||.|||++ +|+||||||+|||+                   
T Consensus        98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~  175 (355)
T 2eu9_A           98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKS  175 (355)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred             EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEecccccccccccccccccc
Confidence            9999999 56788888765556799999999999999999999999 99999999999999                   


Q ss_pred             CCCCCeEEeccCCcccCCCC-CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhh
Q 018244          190 DDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL  268 (359)
Q Consensus       190 ~~~~~~kl~DFg~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~  268 (359)
                      +.++.+||+|||++...... ....||+.|+|||++.+..++.++||||||+++|+|++|..||................
T Consensus       176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  255 (355)
T 2eu9_A          176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL  255 (355)
T ss_dssp             ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence            56789999999999865443 45578999999999998999999999999999999999999987653322111100000


Q ss_pred             c-------------------------------------cc-cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          269 T-------------------------------------DS-CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       269 ~-------------------------------------~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .                                     .+ ..........+.++.+|+.+||+.||++|||+.+++++
T Consensus       256 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  334 (355)
T 2eu9_A          256 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLH  334 (355)
T ss_dssp             CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            0                                     00 00001123456789999999999999999999999864

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=4e-44  Score=325.34  Aligned_cols=246  Identities=18%  Similarity=0.230  Sum_probs=198.6

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCC--CcccccccceeeeCCcceEE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLR--NRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv  131 (359)
                      -..|.+++.||+|+||.||+|...++..||||++.....  ...+.+.+|++++..++  |+||+++++++......++|
T Consensus        27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  106 (313)
T 3cek_A           27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  106 (313)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred             cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence            356889999999999999999988889999999975432  23567899999999997  59999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-  210 (359)
                      || +.+++|.+++..  ...+++..+..++.|++.||.|||++ +++|+||||+||++++ +.+||+|||++....... 
T Consensus       107 ~e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~  181 (313)
T 3cek_A          107 ME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTT  181 (313)
T ss_dssp             EC-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEET-TEEEECCCSSSCC------
T ss_pred             Ee-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEEEC-CeEEEeeccccccccCccc
Confidence            99 457799999974  45789999999999999999999999 9999999999999964 899999999998654332 


Q ss_pred             -----CcCCCccccCcccccC-----------CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccccc
Q 018244          211 -----SYSTNLAFTPPEYLRT-----------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE  274 (359)
Q Consensus       211 -----~~~~t~~y~aPE~~~~-----------~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  274 (359)
                           ...||+.|+|||.+.+           ..++.++||||||+++|+|++|..||........   ...........
T Consensus       182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~  258 (313)
T 3cek_A          182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHE  258 (313)
T ss_dssp             --------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---HHHHHHCTTSC
T ss_pred             cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH---HHHHHHhcccc
Confidence                 3457999999999875           4688899999999999999999998865422111   11112222222


Q ss_pred             CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ..++...+.++.+++.+||+.||++|||+.++++.
T Consensus       259 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          259 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence            23344456789999999999999999999999975

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=2.9e-44  Score=328.19  Aligned_cols=253  Identities=16%  Similarity=0.181  Sum_probs=182.0

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc-hHHHHHHHHH-HHhcCCCcccccccceeeeCCcceEEE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ..+|.+++.||+|+||.||+|.. .+++.||||++...... ....+.+|+. +++.++||||+++++++...+..++||
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            46788899999999999999996 46889999999765432 2345566665 777889999999999999999999999


Q ss_pred             ecCCCCCHhhhhhc---CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC
Q 018244          133 EYMPNDTLAKHLFH---WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~  209 (359)
                      ||+.+ +|.+++..   .....+++..+..++.|++.||.|||++.+++|+||||+||+++.++.+||+|||++......
T Consensus       101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~  179 (327)
T 3aln_A          101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS  179 (327)
T ss_dssp             CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC----
T ss_pred             eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccc
Confidence            99986 78877752   235679999999999999999999998548999999999999999999999999999765443


Q ss_pred             C---CcCCCccccCcccc----cCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHH
Q 018244          210 R---SYSTNLAFTPPEYL----RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       210 ~---~~~~t~~y~aPE~~----~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                      .   ...||+.|+|||++    .+..++.++||||||+++|+|++|..||..................+..........+
T Consensus       180 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (327)
T 3aln_A          180 IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFS  259 (327)
T ss_dssp             --------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCC
T ss_pred             cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCC
Confidence            2   33688999999998    4566899999999999999999999988653211110000000001111111223467


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ..+.+|+.+||+.||++|||+.++++.
T Consensus       260 ~~l~~li~~~l~~dp~~Rps~~ell~h  286 (327)
T 3aln_A          260 PSFINFVNLCLTKDESKRPKYKELLKH  286 (327)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence            789999999999999999999999875

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=7.8e-44  Score=319.46  Aligned_cols=247  Identities=18%  Similarity=0.184  Sum_probs=202.3

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ..|++++.||+|+||.||+|... ++..||+|++....  ....+.+.+|+++++.++||||+++++++......++|||
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  101 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence            46889999999999999999964 68899999986542  2346778999999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC---CCeEEeccCCcccCCCCC
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~---~~~kl~DFg~a~~~~~~~  210 (359)
                      |+.+++|.+++..  ...+++..++.++.|++.||.|||++ +++|+||||+||+++.+   +.+||+|||++.......
T Consensus       102 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~  178 (287)
T 2wei_A          102 LYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT  178 (287)
T ss_dssp             CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred             ccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence            9999999998863  34689999999999999999999999 99999999999999754   469999999988665433


Q ss_pred             ---CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          211 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       211 ---~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                         ...+|+.|+|||.+.+ .++.++||||||+++|+|++|..||...................  ........+.++.+
T Consensus       179 ~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  255 (287)
T 2wei_A          179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF--DLPQWRTISDDAKD  255 (287)
T ss_dssp             SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CSGGGTTSCHHHHH
T ss_pred             ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC--CchhhhhcCHHHHH
Confidence               2346889999999875 58999999999999999999999987654333222111111000  00011245678999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ++.+||+.||++|||+.++++.
T Consensus       256 li~~~l~~dp~~Rps~~ell~h  277 (287)
T 2wei_A          256 LIRKMLTFHPSLRITATQCLEH  277 (287)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHS
T ss_pred             HHHHHcccChhhCcCHHHHhcC
Confidence            9999999999999999999974

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=3.4e-44  Score=333.42  Aligned_cols=251  Identities=16%  Similarity=0.211  Sum_probs=200.5

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-----------Ccccccccceeee
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----------NRRLANLLGCCCE  124 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~~~~  124 (359)
                      ..|.+++.||+|+||+||+|.. .++..||||++.... ...+.+.+|+.+++.++           |+||+++++++..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            5788999999999999999995 578899999997532 33556888999999886           8899999999986


Q ss_pred             CC----cceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC------CCCC
Q 018244          125 GD----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD------DDVN  194 (359)
Q Consensus       125 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~------~~~~  194 (359)
                      .+    ..++||||+ +++|.+++.......+++..+..++.||+.||.|||++.+|+||||||+|||++      ..+.
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~  176 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ  176 (373)
T ss_dssp             EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred             cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcce
Confidence            54    789999999 889999998766667999999999999999999999954899999999999994      4457


Q ss_pred             eEEeccCCcccCCCC-CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHh------hhhhhh
Q 018244          195 PRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR------DRNIQT  267 (359)
Q Consensus       195 ~kl~DFg~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~------~~~~~~  267 (359)
                      +||+|||++...... ....+|+.|+|||++.+..++.++||||||+++|+|++|..||.........      ......
T Consensus       177 ~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  256 (373)
T 1q8y_A          177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL  256 (373)
T ss_dssp             EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred             EEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHh
Confidence            999999999866543 4557899999999999989999999999999999999999988754211000      000000


Q ss_pred             h-----------------cc-------------------ccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          268 L-----------------TD-------------------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       268 ~-----------------~~-------------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .                 ..                   ......++...+.++.+|+.+||+.||++|||+.+++++
T Consensus       257 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  334 (373)
T 1q8y_A          257 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  334 (373)
T ss_dssp             HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             cCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence            0                 00                   000112456778899999999999999999999999874

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=1.5e-43  Score=335.71  Aligned_cols=242  Identities=18%  Similarity=0.132  Sum_probs=185.7

Q ss_pred             cccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEecCCCC
Q 018244           60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        60 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      ...+.||+|+||+||.+...+|..||||++...   ..+.+.+|+++|..+ +||||+++++++.+....+|||||+. |
T Consensus        18 ~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g   93 (434)
T 2rio_A           18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L   93 (434)
T ss_dssp             EEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred             eccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence            344668999999998777778899999998753   245678899999876 89999999999999999999999996 5


Q ss_pred             CHhhhhhcCCCCC-----CCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC-------------CCeEEecc
Q 018244          139 TLAKHLFHWETQP-----MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-------------VNPRLSCF  200 (359)
Q Consensus       139 sL~~~l~~~~~~~-----l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~-------------~~~kl~DF  200 (359)
                      +|.+++.......     .++..++.++.||+.||+|||++ +|+||||||+|||++.+             +.+||+||
T Consensus        94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF  172 (434)
T 2rio_A           94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL-KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF  172 (434)
T ss_dssp             EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred             CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence            9999997432111     12334578999999999999999 99999999999999754             47999999


Q ss_pred             CCcccCCCCC--------CcCCCccccCcccccC-------CCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhh
Q 018244          201 GLMKNSRDGR--------SYSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRN  264 (359)
Q Consensus       201 g~a~~~~~~~--------~~~~t~~y~aPE~~~~-------~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~  264 (359)
                      |+++......        ...||+.|+|||++.+       ..++.++|||||||++|||+| |..||........  ..
T Consensus       173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~--~i  250 (434)
T 2rio_A          173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NI  250 (434)
T ss_dssp             TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH--HH
T ss_pred             ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH--HH
Confidence            9998765432        3468999999999975       568999999999999999999 8887765432211  11


Q ss_pred             hhhhc-cccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          265 IQTLT-DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       265 ~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                      ..... .+..........+.++.+|+.+||+.||++|||+.++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          251 IRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             HHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            11111 111111223567889999999999999999999999986

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=4e-44  Score=326.44  Aligned_cols=240  Identities=18%  Similarity=0.259  Sum_probs=200.1

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc------hHHHHHHHHHHHhcCC--CcccccccceeeeC
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLR--NRRLANLLGCCCEG  125 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~  125 (359)
                      -...|.+.+.||+|+||.||+|.. .++..||||.+......      ....+.+|+.+++.++  |+||+++++++...
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~  120 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP  120 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence            345688999999999999999984 57889999999754322      1234677999999996  59999999999999


Q ss_pred             CcceEEEecCCC-CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC-CCCCeEEeccCCc
Q 018244          126 DERLLVAEYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLM  203 (359)
Q Consensus       126 ~~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~-~~~~~kl~DFg~a  203 (359)
                      +..++||||+.+ ++|.+++..  ...+++..++.++.|++.||.|||+. +++||||||+|||++ +++.+||+|||++
T Consensus       121 ~~~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~  197 (320)
T 3a99_A          121 DSFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG  197 (320)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             CcEEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence            999999999976 899999873  45789999999999999999999999 999999999999999 7899999999999


Q ss_pred             ccCCCC--CCcCCCccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChH
Q 018244          204 KNSRDG--RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD  280 (359)
Q Consensus       204 ~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (359)
                      ......  ....+|+.|+|||++.+..+ +.++||||||+++|+|++|..||.....  ....          ....+..
T Consensus       198 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~----------~~~~~~~  265 (320)
T 3a99_A          198 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--IIRG----------QVFFRQR  265 (320)
T ss_dssp             EECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHC----------CCCCSSC
T ss_pred             cccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--hhcc----------ccccccc
Confidence            876543  34568999999999987765 6789999999999999999988865421  1100          0112344


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          281 EGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+.++.+|+.+||+.||++|||+.++++.
T Consensus       266 ~~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          266 VSSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            56789999999999999999999999863

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.7e-44  Score=323.66  Aligned_cols=238  Identities=19%  Similarity=0.287  Sum_probs=193.5

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc------hHHHHHHHHHHHhcC----CCcccccccceeeeC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQL----RNRRLANLLGCCCEG  125 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l----~h~niv~~~~~~~~~  125 (359)
                      ..|++.+.||+|+||.||+|.. .++..||||++......      ....+.+|+.++..+    +|+||+++++++...
T Consensus        31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~  110 (312)
T 2iwi_A           31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQ  110 (312)
T ss_dssp             --CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC---
T ss_pred             hceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecC
Confidence            4678888999999999999984 56889999999765432      122356789999888    899999999999999


Q ss_pred             CcceEEEec-CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC-CCCCeEEeccCCc
Q 018244          126 DERLLVAEY-MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLM  203 (359)
Q Consensus       126 ~~~~lv~e~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~-~~~~~kl~DFg~a  203 (359)
                      +..++|||| +.+++|.+++..  ...+++..++.++.||+.||.|||++ +++|+||||+||+++ .++.+||+|||++
T Consensus       111 ~~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~kl~dfg~~  187 (312)
T 2iwi_A          111 EGFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSR-GVVHRDIKDENILIDLRRGCAKLIDFGSG  187 (312)
T ss_dssp             --CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHH-TEECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred             CeEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChhhEEEeCCCCeEEEEEcchh
Confidence            999999999 788999999974  45699999999999999999999999 999999999999999 8899999999998


Q ss_pred             ccCCCC--CCcCCCccccCcccccCCCCC-CccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChH
Q 018244          204 KNSRDG--RSYSTNLAFTPPEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD  280 (359)
Q Consensus       204 ~~~~~~--~~~~~t~~y~aPE~~~~~~~~-~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (359)
                      ......  ....+|..|+|||++.+..+. .++||||||+++|+|++|+.||.....  ....          ...++..
T Consensus       188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~----------~~~~~~~  255 (312)
T 2iwi_A          188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--ILEA----------ELHFPAH  255 (312)
T ss_dssp             EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHT----------CCCCCTT
T ss_pred             hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--Hhhh----------ccCCccc
Confidence            876543  345688999999999877664 489999999999999999988865421  1110          1123455


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          281 EGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+.++.+++.+||+.||++|||+.+++++
T Consensus       256 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          256 VSPDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            67789999999999999999999999874

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=3.6e-43  Score=319.43  Aligned_cols=249  Identities=17%  Similarity=0.230  Sum_probs=183.0

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCch-H-HHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPD-A-RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~-~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      .+.+|.+++.||+|+||.||+|... ++..||||++....... . +.+.++..+++.++||||+++++++...+..++|
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv  102 (318)
T 2dyl_A           23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA  102 (318)
T ss_dssp             CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence            3567889999999999999999964 68899999997654332 2 2344555678888999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-  209 (359)
                      |||+ ++.+..+... ....+++..+..++.|++.||.|||+ . +++|+||||+||+++.++.+||+|||++...... 
T Consensus       103 ~e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~  179 (318)
T 2dyl_A          103 MELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKH-GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK  179 (318)
T ss_dssp             ECCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred             Eecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhC-CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence            9999 4455555432 35679999999999999999999998 5 8999999999999999999999999998765433 


Q ss_pred             --CCcCCCccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHH-HhhhhhhhhccccccCCCChHH
Q 018244          210 --RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQFSSDE  281 (359)
Q Consensus       210 --~~~~~t~~y~aPE~~~-----~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  281 (359)
                        ....+|+.|+|||++.     ...++.++||||||+++|+|++|..||....... ........ ..+.  .......
T Consensus       180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~--~~~~~~~  256 (318)
T 2dyl_A          180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE-EPPL--LPGHMGF  256 (318)
T ss_dssp             -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHS-CCCC--CCSSSCC
T ss_pred             cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhcc-CCCC--CCccCCC
Confidence              2346889999999985     4568899999999999999999998886532211 11111111 0110  0111235


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          282 GTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       282 ~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.++.+|+.+||+.||.+|||+.+++++
T Consensus       257 ~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          257 SGDFQSFVKDCLTKDHRKRPKYNKLLEH  284 (318)
T ss_dssp             CHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            6789999999999999999999999874

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=5.2e-43  Score=331.36  Aligned_cols=242  Identities=14%  Similarity=0.118  Sum_probs=187.2

Q ss_pred             cccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEEEecCC
Q 018244           58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      .|.+.+.||+|+||+||.....++..||||++......   .+.+|+++|+.+ +||||+++++++.+....+|||||+.
T Consensus        25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~  101 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA  101 (432)
T ss_dssp             EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence            57777888999999976555667889999999764432   346799999999 79999999999999999999999996


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC-----CCCeEEeccCCcccCCCC--
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-----DVNPRLSCFGLMKNSRDG--  209 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~-----~~~~kl~DFg~a~~~~~~--  209 (359)
                       |+|.+++.. ......+..+..++.||+.||.|||+. +|+||||||+|||++.     ...+||+|||+++.....  
T Consensus       102 -g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~  178 (432)
T 3p23_A          102 -ATLQEYVEQ-KDFAHLGLEPITLLQQTTSGLAHLHSL-NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH  178 (432)
T ss_dssp             -EEHHHHHHS-SSCCCCSSCHHHHHHHHHHHHHHHHHT-TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred             -CCHHHHHHh-cCCCccchhHHHHHHHHHHHHHHHHHC-cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence             599999975 333455556779999999999999999 9999999999999953     346889999999875432  


Q ss_pred             -----CCcCCCccccCcccccC---CCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChH
Q 018244          210 -----RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD  280 (359)
Q Consensus       210 -----~~~~~t~~y~aPE~~~~---~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (359)
                           ....||+.|+|||++.+   ..++.++|||||||++|+|++ |..||.......... .......  ........
T Consensus       179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~-~~~~~~~--~~~~~~~~  255 (432)
T 3p23_A          179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI-LLGACSL--DCLHPEKH  255 (432)
T ss_dssp             -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH-HTTCCCC--TTSCTTCH
T ss_pred             ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH-HhccCCc--cccCcccc
Confidence                 23568999999999983   567889999999999999999 777764433222111 1110000  01112345


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          281 EGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       281 ~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                      .+..+.+|+.+||+.||++|||+.++++
T Consensus       256 ~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          256 EDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             HHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            6778999999999999999999999995

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=5e-43  Score=342.77  Aligned_cols=260  Identities=18%  Similarity=0.181  Sum_probs=201.6

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeee------CC
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCE------GD  126 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~  126 (359)
                      .+..|.+.+.||.|+||+||+|.. .+|..||||++..... ...+.+.+|+++++.++||||+++++++..      .+
T Consensus        12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~   91 (676)
T 3qa8_A           12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND   91 (676)
T ss_dssp             -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred             CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence            346789999999999999999985 5688999999876532 335668999999999999999999998765      66


Q ss_pred             cceEEEecCCCCCHhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCC---eEEeccCC
Q 018244          127 ERLLVAEYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGL  202 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~---~kl~DFg~  202 (359)
                      ..++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+. |++|+||||+||+++.++.   +||+|||+
T Consensus        92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~-gIVHrDLKP~NILl~~~g~~~~vKL~DFG~  170 (676)
T 3qa8_A           92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGY  170 (676)
T ss_dssp             SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT-TBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred             eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHeEeecCCCceeEEEccccc
Confidence            7899999999999999997532 23689999999999999999999999 9999999999999997665   99999999


Q ss_pred             cccCCCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhh----------hhhhhc
Q 018244          203 MKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR----------NIQTLT  269 (359)
Q Consensus       203 a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~----------~~~~~~  269 (359)
                      +......   ....+|+.|+|||.+.+..++.++||||||+++|+|++|..||...........          ......
T Consensus       171 a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l  250 (676)
T 3qa8_A          171 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDL  250 (676)
T ss_dssp             CCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCC
T ss_pred             ccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhh
Confidence            9876543   345689999999999999999999999999999999999999865321110000          000000


Q ss_pred             c--------ccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHH-----HHHHHHHhhh
Q 018244          270 D--------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRS-----LVTALVTLQK  315 (359)
Q Consensus       270 ~--------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~-----il~~L~~~~~  315 (359)
                      .        ...........+..+.+++.+||+.||++|||+.+     .++.++.+..
T Consensus       251 ~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~  309 (676)
T 3qa8_A          251 TGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS  309 (676)
T ss_dssp             SSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred             ccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence            0        00011234567899999999999999999999988     4455555544

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=3.1e-42  Score=308.90  Aligned_cols=232  Identities=13%  Similarity=0.109  Sum_probs=185.1

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCch---HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ..|++++.||+|+||.||+|... ++..||||++.......   .+.+.+|+.++..++||||+++++++...+..|+||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            35888999999999999999964 58899999998654332   367899999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCc
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY  212 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~  212 (359)
                      ||+++++|.+++..   + .....+..++.|++.||.|||++ ||+||||||+|||++.++.+||+++|           
T Consensus       111 e~~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH~~-givH~Dikp~NIll~~~g~~kl~~~~-----------  174 (286)
T 3uqc_A          111 EWIRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAHRA-GVALSIDHPSRVRVSIDGDVVLAYPA-----------  174 (286)
T ss_dssp             ECCCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred             EecCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHHHC-CCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence            99999999999842   2 45667889999999999999999 99999999999999999999998554           


Q ss_pred             CCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcc-ccccCCCChHHHHHHHHHHHH
Q 018244          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD-SCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       213 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~  291 (359)
                           |++       .++.++||||||+++|+|+||+.||.................. ...........+.++.+|+.+
T Consensus       175 -----~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  242 (286)
T 3uqc_A          175 -----TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAAR  242 (286)
T ss_dssp             -----CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHH
T ss_pred             -----ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHH
Confidence                 333       3688999999999999999999998764321100000000000 000001123456789999999


Q ss_pred             hcccCCCCCCCHHHHHHHHHHhhhcc
Q 018244          292 CLQYEPRERPNPRSLVTALVTLQKDT  317 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~L~~~~~~~  317 (359)
                      ||+.||++| |+.++++.|+.+....
T Consensus       243 ~l~~dP~~R-s~~el~~~L~~~~~~~  267 (286)
T 3uqc_A          243 SVQGDGGIR-SASTLLNLMQQATAVA  267 (286)
T ss_dssp             HHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred             HcccCCccC-CHHHHHHHHHHHhccC
Confidence            999999999 9999999999986543

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=6.4e-42  Score=308.86  Aligned_cols=227  Identities=16%  Similarity=0.149  Sum_probs=182.1

Q ss_pred             Cccccc-ccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHH-hcCCCcccccccceeee----CCcce
Q 018244           57 AMENIV-SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAV-GQLRNRRLANLLGCCCE----GDERL  129 (359)
Q Consensus        57 ~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~----~~~~~  129 (359)
                      ..|.++ +.||+|+||.||+|.. .++..||+|++..     ...+.+|+.++ +.++||||+++++++..    ....+
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            456777 5689999999999995 5688999999964     24567888888 55689999999999977    66789


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC---CCCeEEeccCCcccC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNS  206 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~---~~~~kl~DFg~a~~~  206 (359)
                      +||||+++|+|.+++.......+++..++.++.|++.||.|||+. +++||||||+||+++.   ++.+||+|||++...
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  170 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  170 (299)
T ss_dssp             EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEecCCCCCcEEEecccccccc
Confidence            999999999999999875566799999999999999999999999 9999999999999997   788999999998643


Q ss_pred             CCCCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCC----hHHH
Q 018244          207 RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS----SDEG  282 (359)
Q Consensus       207 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  282 (359)
                      .                  +..++.++||||||+++|+|++|..||....................  ...+    ...+
T Consensus       171 ~------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  230 (299)
T 3m2w_A          171 T------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ--YEFPNPEWSEVS  230 (299)
T ss_dssp             T------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTC--CSSCHHHHTTSC
T ss_pred             c------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhcc--ccCCchhcccCC
Confidence            2                  24578899999999999999999999865533222111111111110  1111    2356


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .++.+|+.+||+.||++|||+.+++++
T Consensus       231 ~~~~~li~~~l~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          231 EEVKMLIRNLLKTEPTQRMTITEFMNH  257 (299)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            789999999999999999999999975

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2e-42  Score=345.52  Aligned_cols=239  Identities=18%  Similarity=0.210  Sum_probs=195.6

Q ss_pred             CcccccccCCCCCCcEEEEEEeC--CCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCc-----c
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE--NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE-----R  128 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-----~  128 (359)
                      ..|++++.||+|+||+||+|...  ++..||||++..... .....+.+|+++++.++||||+++++++...+.     .
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence            57889999999999999999964  588999999875443 234568899999999999999999999988765     6


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      ||||||+++++|.+++.   . .+++..+..++.||+.||.|||++ +|+||||||+|||++.+ .+||+|||+++....
T Consensus       160 ~lv~E~~~g~~L~~~~~---~-~l~~~~~~~~~~qi~~aL~~lH~~-giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~  233 (681)
T 2pzi_A          160 YIVMEYVGGQSLKRSKG---Q-KLPVAEAIAYLLEILPALSYLHSI-GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS  233 (681)
T ss_dssp             EEEEECCCCEECC-------C-CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred             EEEEEeCCCCcHHHHHh---C-CCCHHHHHHHHHHHHHHHHHHHHC-CCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence            99999999999998763   2 699999999999999999999999 99999999999999975 999999999998877


Q ss_pred             CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          209 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       209 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                      .....||+.|+|||++.+. ++.++||||||+++|+|++|..|+........        .    ........+..+.+|
T Consensus       234 ~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~--------~----~~~~~~~~~~~l~~l  300 (681)
T 2pzi_A          234 FGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL--------P----EDDPVLKTYDSYGRL  300 (681)
T ss_dssp             CSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC--------C----TTCHHHHHCHHHHHH
T ss_pred             CCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc--------c----ccccccccCHHHHHH
Confidence            7777899999999998765 48899999999999999999876654211100        0    000112245689999


Q ss_pred             HHHhcccCCCCCCC-HHHHHHHHHHhh
Q 018244          289 ASRCLQYEPRERPN-PRSLVTALVTLQ  314 (359)
Q Consensus       289 i~~cl~~dp~~Rps-~~~il~~L~~~~  314 (359)
                      +.+||+.||++||+ ++++...|..+.
T Consensus       301 i~~~l~~dP~~R~~~~~~l~~~l~~~~  327 (681)
T 2pzi_A          301 LRRAIDPDPRQRFTTAEEMSAQLTGVL  327 (681)
T ss_dssp             HHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HhhhccCChhhCCCHHHHHHHHHHHHH
Confidence            99999999999995 555666666543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=8.4e-43  Score=319.83  Aligned_cols=240  Identities=12%  Similarity=0.067  Sum_probs=187.1

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCC--------chHHHHHHHHHHHhcCC----------------
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--------PDARQFLEEARAVGQLR----------------  111 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~----------------  111 (359)
                      ..+|.+++.||+|+||+||+|+. +|..||||++.....        ...+.+.+|+.+|+.++                
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            35688899999999999999998 678999999986532        22467889999988886                


Q ss_pred             ----------Ccccccccceeee-------------CCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 018244          112 ----------NRRLANLLGCCCE-------------GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEAL  168 (359)
Q Consensus       112 ----------h~niv~~~~~~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L  168 (359)
                                ||||+++++++..             ....+|||||+++|++.+.+.   ...+++..+..++.||+.||
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~---~~~~~~~~~~~i~~qi~~aL  174 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR---TKLSSLATAKSILHQLTASL  174 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT---TTCCCHHHHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH---hcCCCHHHHHHHHHHHHHHH
Confidence                      6666666666665             678999999999998777773   35689999999999999999


Q ss_pred             HHhh-cCCCcccccCCCCCeeeCCCC--------------------CeEEeccCCcccCCCCCCcCCCccccCcccccCC
Q 018244          169 EYCT-SKERALYHDLNAYRIVFDDDV--------------------NPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTG  227 (359)
Q Consensus       169 ~~LH-~~~~ivH~Dikp~NIll~~~~--------------------~~kl~DFg~a~~~~~~~~~~~t~~y~aPE~~~~~  227 (359)
                      .||| ++ +|+||||||+|||++.++                    .+||+|||+++..... ...||+.|+|||++.+.
T Consensus       175 ~~lH~~~-~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g~  252 (336)
T 2vuw_A          175 AVAEASL-RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTGD  252 (336)
T ss_dssp             HHHHHHH-CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCCC
T ss_pred             HHHHHhC-CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcCC
Confidence            9999 88 999999999999999887                    8999999999876543 45789999999999866


Q ss_pred             CCCCccchhhHHHH-HHHHHhCCCCCCcchhHH-Hhhhhhhhhc-cccccCCCChHHHHHHHHHHHHhcccCCCCCCCHH
Q 018244          228 RVTPESVMYSFGTL-LLDLLSGKHIPPSHALDL-IRDRNIQTLT-DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR  304 (359)
Q Consensus       228 ~~~~~~Di~slG~i-l~elltg~~p~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~  304 (359)
                      . +.++||||+|++ .+++++|..||....+.. .......... ............++++.+|+.+||+.|     |+.
T Consensus       253 ~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~  326 (336)
T 2vuw_A          253 G-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SAT  326 (336)
T ss_dssp             S-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHH
T ss_pred             C-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHH
Confidence            6 889999998776 778888988775432211 1111110100 111111122457899999999999977     899


Q ss_pred             HHH
Q 018244          305 SLV  307 (359)
Q Consensus       305 ~il  307 (359)
                      +++
T Consensus       327 e~l  329 (336)
T 2vuw_A          327 DLL  329 (336)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            888

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=4.3e-42  Score=323.61  Aligned_cols=239  Identities=15%  Similarity=0.093  Sum_probs=182.1

Q ss_pred             cccccccCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCCc---hHHHHHHHHHHHhcCCC-cccccccce-----------
Q 018244           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRN-RRLANLLGC-----------  121 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h-~niv~~~~~-----------  121 (359)
                      .+...+.||+|+||+||+|. ..+|+.||||++......   ..+.+.+|+.+++.++| +|......+           
T Consensus        79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  158 (413)
T 3dzo_A           79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK  158 (413)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred             eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence            35666778999999999999 457899999999844322   25678999999999987 322211111           


Q ss_pred             ----------eee-----CCcceEEEecCCCCCHhhhhh-----cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 018244          122 ----------CCE-----GDERLLVAEYMPNDTLAKHLF-----HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHD  181 (359)
Q Consensus       122 ----------~~~-----~~~~~lv~e~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~D  181 (359)
                                +..     ....+++|+++ +++|.+++.     ......+++..+..++.||+.||.|||++ +|+|||
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~iiHrD  236 (413)
T 3dzo_A          159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-GLVHTY  236 (413)
T ss_dssp             CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-TEECSC
T ss_pred             cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCC
Confidence                      111     12456777776 569999884     22345678889999999999999999999 999999


Q ss_pred             CCCCCeeeCCCCCeEEeccCCcccCCCC-CCcCCCccccCcccc----------cCCCCCCccchhhHHHHHHHHHhCCC
Q 018244          182 LNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYL----------RTGRVTPESVMYSFGTLLLDLLSGKH  250 (359)
Q Consensus       182 ikp~NIll~~~~~~kl~DFg~a~~~~~~-~~~~~t~~y~aPE~~----------~~~~~~~~~Di~slG~il~elltg~~  250 (359)
                      |||+|||++.++.+||+|||+++..... ....| +.|+|||++          .+..++.++|||||||++|+|++|+.
T Consensus       237 iKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~  315 (413)
T 3dzo_A          237 LRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL  315 (413)
T ss_dssp             CCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSC
T ss_pred             cccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCC
Confidence            9999999999999999999998865543 33456 999999999          55568899999999999999999999


Q ss_pred             CCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          251 IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       251 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ||...........    ....      ....++++.+|+.+||+.||++|||+.++++.
T Consensus       316 Pf~~~~~~~~~~~----~~~~------~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~  364 (413)
T 3dzo_A          316 PNTDDAALGGSEW----IFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMET  364 (413)
T ss_dssp             CCCTTGGGSCSGG----GGSS------CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             CCCCcchhhhHHH----HHhh------cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            9876532221111    1110      12345789999999999999999999888653

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=100.00  E-value=1e-34  Score=282.83  Aligned_cols=179  Identities=12%  Similarity=0.063  Sum_probs=128.1

Q ss_pred             cCCCCCCcEEEEEE-eCCCcEEEEEEeCCCCC----------chHHHHHHHHHHHhcC-CCcccccccceeeeCCcceEE
Q 018244           64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW----------PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~----------~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv  131 (359)
                      ..+.|++|.+..+. .--|+.+|+|++.....          ...+++.+|+++|+++ .|+||+++++++.+....|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            45677777777665 33477899999976421          1235689999999999 699999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-  210 (359)
                      |||++|++|.++|.  ..+.++..   .|+.||+.||+|+|++ |||||||||+|||++++|.+||+|||+|+...... 
T Consensus       321 MEyv~G~~L~d~i~--~~~~l~~~---~I~~QIl~AL~ylH~~-GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~  394 (569)
T 4azs_A          321 MEKLPGRLLSDMLA--AGEEIDRE---KILGSLLRSLAALEKQ-GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS  394 (569)
T ss_dssp             EECCCSEEHHHHHH--TTCCCCHH---HHHHHHHHHHHHHHHT-TCEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred             EecCCCCcHHHHHH--hCCCCCHH---HHHHHHHHHHHHHHHC-CceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence            99999999999997  45567764   4789999999999999 99999999999999999999999999998765433 


Q ss_pred             ---CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCC
Q 018244          211 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK  249 (359)
Q Consensus       211 ---~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~  249 (359)
                         ...||+.|+|||++.+ .+..++|+||+|++++++.++.
T Consensus       395 ~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~  435 (569)
T 4azs_A          395 WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPW  435 (569)
T ss_dssp             CSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred             cccCceechhhccHHHhCC-CCCCcccccccccchhhhcccc
Confidence               3468999999999974 5677899999999988776554

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.96  E-value=7.2e-30  Score=247.34  Aligned_cols=177  Identities=14%  Similarity=0.120  Sum_probs=144.0

Q ss_pred             cccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc--------hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      .+.||+|+||+||+|.. .+..+|+|........        ..+.+.+|+++|+.++||||+++..++...+..+||||
T Consensus       341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE  419 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS  419 (540)
T ss_dssp             -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred             CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence            34579999999999964 4567999987543221        12347899999999999999987777778888999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |+++++|.+++..          +..++.|++.||.|||++ +|+||||||+|||++.  .+||+|||+++.....    
T Consensus       420 ~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~-gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~  486 (540)
T 3en9_A          420 YINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN-DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKA  486 (540)
T ss_dssp             CCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT-TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHH
T ss_pred             CCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC-cCccCCCCHHHEEECC--eEEEEECccCEECCCccccc
Confidence            9999999999853          568999999999999999 9999999999999998  9999999999987653    


Q ss_pred             -------CCcCCCccccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCC
Q 018244          210 -------RSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIP  252 (359)
Q Consensus       210 -------~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~elltg~~p~  252 (359)
                             ....||+.|+|||++..  ..|+..+|+|+..+-.++-+.++.++
T Consensus       487 ~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          487 VDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             cchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence                   24568999999999986  56888899999999888887766443

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.94  E-value=5.7e-27  Score=208.95  Aligned_cols=154  Identities=16%  Similarity=0.055  Sum_probs=123.7

Q ss_pred             HHHHHhcCCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCC------------------chHHHHHHHHHHHhc
Q 018244           48 TLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW------------------PDARQFLEEARAVGQ  109 (359)
Q Consensus        48 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~  109 (359)
                      .+....+.-..|.+.+.||.|+||.||+|...+|..||||.+.....                  .....+.+|+++|+.
T Consensus        81 ~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~  160 (282)
T 1zar_A           81 SLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK  160 (282)
T ss_dssp             HHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence            34444455556666689999999999999997789999999975321                  124568899999999


Q ss_pred             CCCcccccccceeeeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee
Q 018244          110 LRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF  189 (359)
Q Consensus       110 l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll  189 (359)
                      ++  | +++.+++.. +..++||||+++++|.+ +..        .....++.|++.||.|||+. |++||||||+|||+
T Consensus       161 l~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~-giiHrDlkp~NILl  226 (282)
T 1zar_A          161 LQ--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR-GIVHGDLSQYNVLV  226 (282)
T ss_dssp             TT--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEE
T ss_pred             cc--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC-CCEeCCCCHHHEEE
Confidence            99  5 777776644 56799999999999988 521        12457999999999999999 99999999999999


Q ss_pred             CCCCCeEEeccCCcccCCCCCCcCCCccccCccccc
Q 018244          190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLR  225 (359)
Q Consensus       190 ~~~~~~kl~DFg~a~~~~~~~~~~~t~~y~aPE~~~  225 (359)
                      + ++.+||+|||++..         +..++|||++.
T Consensus       227 ~-~~~vkl~DFG~a~~---------~~~~~a~e~l~  252 (282)
T 1zar_A          227 S-EEGIWIIDFPQSVE---------VGEEGWREILE  252 (282)
T ss_dssp             E-TTEEEECCCTTCEE---------TTSTTHHHHHH
T ss_pred             E-CCcEEEEECCCCeE---------CCCCCHHHHHH
Confidence            9 99999999999863         34578899875

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.88  E-value=9.7e-23  Score=179.33  Aligned_cols=153  Identities=13%  Similarity=0.051  Sum_probs=115.1

Q ss_pred             cCHHHHHHHhcCCCcccccccCCCCCCcEEEEEEe-CCCcE--EEEEEeCCCCCch------------------------
Q 018244           44 YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFR--IAVKRFNRSAWPD------------------------   96 (359)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~------------------------   96 (359)
                      ++...+....+.-..|.+.+.||+|+||.||+|.. .+|..  ||||++.......                        
T Consensus        34 ~~~~~l~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (258)
T 1zth_A           34 RTLKTLYKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKV  113 (258)
T ss_dssp             HHHHHHHHHHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHH
T ss_pred             HHHHHHHHHHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHH
Confidence            33444555555556678889999999999999996 68888  9999876432110                        


Q ss_pred             HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCC-C----CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHh
Q 018244           97 ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN-D----TLAKHLFHWETQPMKWAMRLRVALHIAEALEYC  171 (359)
Q Consensus        97 ~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L  171 (359)
                      ...+.+|+.+|..+.|+++.....+..  ...+|||||+.+ |    +|.+....     .++..+..++.|++.||.||
T Consensus       114 ~~~~~~E~~~l~~l~~~~i~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~l  186 (258)
T 1zth_A          114 FIWTEKEFRNLERAKEAGVSVPQPYTY--MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRL  186 (258)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCEEEE--ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCeEEEc--CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHH
Confidence            125788999999998886532222221  367999999942 3    67665532     23456788999999999999


Q ss_pred             h-cCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          172 T-SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       172 H-~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      | +. |++||||||+|||++.  .++|+|||++...
T Consensus       187 H~~~-givHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          187 YQEA-ELVHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             HHTS-CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             HHHC-CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence            9 88 9999999999999998  9999999998754

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.79  E-value=4e-20  Score=169.41  Aligned_cols=150  Identities=10%  Similarity=0.054  Sum_probs=106.2

Q ss_pred             HHHHHHHhcCCCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc--------------hHHHH--------HHH
Q 018244           46 IETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--------------DARQF--------LEE  103 (359)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------~~~~~--------~~e  103 (359)
                      +-.|....+.-..|.+.+.||.|++|.||+|...+|..||||+++.....              .....        .+|
T Consensus        84 ~LAL~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE  163 (397)
T 4gyi_A           84 YLALHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKE  163 (397)
T ss_dssp             HHHHHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHH
Confidence            34556666666678999999999999999999888999999987632100              01112        235


Q ss_pred             HHHHhcCCCcccccccceeeeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCC
Q 018244          104 ARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN  183 (359)
Q Consensus       104 ~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dik  183 (359)
                      ...|.++.+.++.....+..  ...+|||||++|++|.++..      .  .....++.|++.+|.+||+. ||||||||
T Consensus       164 ~~nL~rL~~~gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~------~--~~~~~l~~qll~~l~~lH~~-gIVHrDLK  232 (397)
T 4gyi_A          164 FAFMKALYEEGFPVPEPIAQ--SRHTIVMSLVDALPMRQVSS------V--PDPASLYADLIALILRLAKH-GLIHGDFN  232 (397)
T ss_dssp             HHHHHHHHHTTCSCCCEEEE--ETTEEEEECCSCEEGGGCCC------C--SCHHHHHHHHHHHHHHHHHT-TEECSCCS
T ss_pred             HHHHHHHHhcCCCCCeeeec--cCceEEEEecCCccHhhhcc------c--HHHHHHHHHHHHHHHHHHHC-CCcCCCCC
Confidence            55555553333322111111  23479999999988876542      1  12356789999999999999 99999999


Q ss_pred             CCCeeeCCCCC----------eEEeccCCcccC
Q 018244          184 AYRIVFDDDVN----------PRLSCFGLMKNS  206 (359)
Q Consensus       184 p~NIll~~~~~----------~kl~DFg~a~~~  206 (359)
                      |.|||+++++.          +.|+||+.+-..
T Consensus       233 p~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          233 EFNILIREEKDAEDPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             TTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred             HHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence            99999987763          899999976543

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.49  E-value=6.7e-14  Score=122.93  Aligned_cols=139  Identities=14%  Similarity=-0.021  Sum_probs=108.8

Q ss_pred             cccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEEEecCC
Q 018244           58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      .|.+...+|.|+.+.||++... +..+++|............+.+|+.+++.+. +.++.++++++...+..|+||||++
T Consensus        15 ~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~   93 (263)
T 3tm0_A           15 KYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD   93 (263)
T ss_dssp             TSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred             cceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecC
Confidence            4667777788888999999864 5689999987532122345788999999885 6778889999988889999999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC------------------------------------------
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK------------------------------------------  174 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~------------------------------------------  174 (359)
                      |.+|.+.+.       +......++.+++.+|..||+.                                          
T Consensus        94 G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (263)
T 3tm0_A           94 GVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD  166 (263)
T ss_dssp             SEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSS
T ss_pred             CeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCC
Confidence            999987642       1122347788999999999981                                          


Q ss_pred             ----------------CCcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          175 ----------------ERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       175 ----------------~~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                                      ..++|+|++|.||+++++..+.|+||+.+.
T Consensus       167 ~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          167 PRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             HHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                            148999999999999876556799999764

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.36  E-value=1.7e-12  Score=113.42  Aligned_cols=133  Identities=14%  Similarity=0.081  Sum_probs=98.5

Q ss_pred             ccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcc--cccccceeeeCCcceEEEecCC
Q 018244           59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      +.+....+.|..+.||++...+|..+++|......   ...+.+|+.+++.+.+.+  +.+++++....+..++||||++
T Consensus        22 ~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~   98 (264)
T 1nd4_A           22 YDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP   98 (264)
T ss_dssp             CEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred             CceEecccCCCCceEEEEecCCCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecC
Confidence            33333334566799999987777789999976542   245678999998885444  5668888877778899999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-----------------------------------------
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE-----------------------------------------  175 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-----------------------------------------  175 (359)
                      |.+|.  ..   .  .+   ...++.+++..|..||+..                                         
T Consensus        99 G~~l~--~~---~--~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
T 1nd4_A           99 GQDLL--SS---H--LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA  168 (264)
T ss_dssp             SEETT--TS---C--CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred             CcccC--cC---c--CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence            98884  21   1  12   2356778888888888741                                         


Q ss_pred             ----------------CcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          176 ----------------RALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       176 ----------------~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                                      .++|+|++|.||++++++.+.|+||+.+.
T Consensus       169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                            18999999999999877667799999864

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.28  E-value=1.6e-11  Score=112.74  Aligned_cols=145  Identities=14%  Similarity=0.123  Sum_probs=108.0

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeC--CCCC-chHHHHHHHHHHHhcCC--CcccccccceeeeC---Ccc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFN--RSAW-PDARQFLEEARAVGQLR--NRRLANLLGCCCEG---DER  128 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~-~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~---~~~  128 (359)
                      .....++.++.|.++.||+....+ ..+++|+..  .... .....+.+|+.+++.+.  +..+++++.++.+.   +..
T Consensus        38 ~~~~~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~  116 (359)
T 3dxp_A           38 AGPLSVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRA  116 (359)
T ss_dssp             CCCCEEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSC
T ss_pred             CCCceEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCe
Confidence            334456678999999999998765 478888876  3321 22346788999999987  44578888887765   348


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC----------------------------------
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK----------------------------------  174 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~----------------------------------  174 (359)
                      |+||||++|..+.+..    -..++......++.+++.+|..||+.                                  
T Consensus       117 ~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (359)
T 3dxp_A          117 FYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE  192 (359)
T ss_dssp             EEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred             EEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence            9999999997775422    23477888899999999999999971                                  


Q ss_pred             -----------------------CCcccccCCCCCeeeCCCCC--eEEeccCCcccC
Q 018244          175 -----------------------ERALYHDLNAYRIVFDDDVN--PRLSCFGLMKNS  206 (359)
Q Consensus       175 -----------------------~~ivH~Dikp~NIll~~~~~--~kl~DFg~a~~~  206 (359)
                                             ..++|+|++|.||+++.++.  +.|+||+.+...
T Consensus       193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g  249 (359)
T 3dxp_A          193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG  249 (359)
T ss_dssp             CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred             CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence                                   36899999999999997653  689999988653

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=99.11  E-value=2e-11  Score=109.55  Aligned_cols=181  Identities=13%  Similarity=0.104  Sum_probs=120.0

Q ss_pred             cccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-Ccc--cccccceeeeCC---cceEEEecC
Q 018244           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRR--LANLLGCCCEGD---ERLLVAEYM  135 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lv~e~~  135 (359)
                      ++.++.|..+.||+..    ..+++|.....  .....+.+|..+|+.+. +..  +.+++......+   ..|+||+++
T Consensus        25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i   98 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI   98 (304)
T ss_dssp             CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred             eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence            4456889999999864    35888986532  23567889999998884 333  334444433332   358999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC-----------------------------------------
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-----------------------------------------  174 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-----------------------------------------  174 (359)
                      +|.+|.+...    ..++..+...++.+++..|..||+.                                         
T Consensus        99 ~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  174 (304)
T 3sg8_A           99 KGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD  174 (304)
T ss_dssp             CCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred             CCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence            9988865432    2467777888888888888888851                                         


Q ss_pred             ----------------CCcccccCCCCCeeeCC--CCCeEEeccCCcccCCCCCCcCCCccc---cCcccccC-----C-
Q 018244          175 ----------------ERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRDGRSYSTNLAF---TPPEYLRT-----G-  227 (359)
Q Consensus       175 ----------------~~ivH~Dikp~NIll~~--~~~~kl~DFg~a~~~~~~~~~~~t~~y---~aPE~~~~-----~-  227 (359)
                                      ..++|+|++|.||++++  ...+.|+||+.+...+..........+   ..|+....     + 
T Consensus       175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~  254 (304)
T 3sg8_A          175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH  254 (304)
T ss_dssp             HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred             HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence                            14699999999999997  456889999998765432211111111   12221110     0 


Q ss_pred             --------CCCCccchhhHHHHHHHHHhCCCCC
Q 018244          228 --------RVTPESVMYSFGTLLLDLLSGKHIP  252 (359)
Q Consensus       228 --------~~~~~~Di~slG~il~elltg~~p~  252 (359)
                              ....-.+.|++|.++|.+.+|..++
T Consensus       255 ~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          255 KDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence                    0112257999999999999998544

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.66  E-value=9.5e-08  Score=85.52  Aligned_cols=135  Identities=14%  Similarity=0.050  Sum_probs=92.6

Q ss_pred             cccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCc---ccccccceee-eCCcceEEEecCCC
Q 018244           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNR---RLANLLGCCC-EGDERLLVAEYMPN  137 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~~  137 (359)
                      +..++.|....||+.    +..+++|+...  ......+.+|.++|+.+.+.   .+.+.+.++. ..+..++||||++|
T Consensus        24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G   97 (306)
T 3tdw_A           24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG   97 (306)
T ss_dssp             EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred             eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence            345678888899988    45688888532  12345788999999999753   3555565553 34457899999999


Q ss_pred             CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------------------------------------------
Q 018244          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-------------------------------------------  174 (359)
Q Consensus       138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-------------------------------------------  174 (359)
                      .+|.+...    ..++......++.+++..|..||+.                                           
T Consensus        98 ~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~  173 (306)
T 3tdw_A           98 QILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT  173 (306)
T ss_dssp             EECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred             eECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence            88766321    1234555555666666666655542                                           


Q ss_pred             ----------------CCcccccCCCCCeeeCC---CCCe-EEeccCCcccC
Q 018244          175 ----------------ERALYHDLNAYRIVFDD---DVNP-RLSCFGLMKNS  206 (359)
Q Consensus       175 ----------------~~ivH~Dikp~NIll~~---~~~~-kl~DFg~a~~~  206 (359)
                                      ..++|+|++|.||+++.   ++.+ .|+||+.+...
T Consensus       174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence                            13589999999999987   4554 89999987643

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.55  E-value=4.1e-07  Score=79.64  Aligned_cols=126  Identities=16%  Similarity=0.051  Sum_probs=91.0

Q ss_pred             cEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEEEecCCCCCHhhhhhcCC
Q 018244           71 NVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE  148 (359)
Q Consensus        71 g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~  148 (359)
                      +.||+.... ++..+.+|+-...   ....+.+|...|+.+. +-.+.++++++.+.+..++|||+++|.++.+....  
T Consensus        39 ~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~--  113 (272)
T 4gkh_A           39 ATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEE--  113 (272)
T ss_dssp             CEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHH--
T ss_pred             CeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccC--
Confidence            469988743 5667889986542   3456788999998884 33467788888888899999999999887765532  


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHhhcC------------------------------------------------------
Q 018244          149 TQPMKWAMRLRVALHIAEALEYCTSK------------------------------------------------------  174 (359)
Q Consensus       149 ~~~l~~~~~~~i~~qi~~~L~~LH~~------------------------------------------------------  174 (359)
                          .......+..+++..|.-||..                                                      
T Consensus       114 ----~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  189 (272)
T 4gkh_A          114 ----YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPF  189 (272)
T ss_dssp             ----CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCC
T ss_pred             ----CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccc
Confidence                1122334555666666666641                                                      


Q ss_pred             ---CCcccccCCCCCeeeCCCCCeEEeccCCccc
Q 018244          175 ---ERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (359)
Q Consensus       175 ---~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~  205 (359)
                         ..++|+|+.+.||++++++.+-|+||+.+..
T Consensus       190 ~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          190 SPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             CCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence               0268999999999999877778999998653

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.51  E-value=1.1e-07  Score=86.82  Aligned_cols=81  Identities=5%  Similarity=-0.050  Sum_probs=54.6

Q ss_pred             cccC-CCCCCcEEEEEEeC-------CCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCC-C--cccccccceeeeC--
Q 018244           62 VSEH-GEKAPNVVYKGKLE-------NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLR-N--RRLANLLGCCCEG--  125 (359)
Q Consensus        62 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h--~niv~~~~~~~~~--  125 (359)
                      ++.| +.|..+.+|+....       ++..+++|......   ......+.+|+.+++.+. +  -.+.+++.++.+.  
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~  104 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV  104 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence            4556 78888999998754       25678888865432   111234677888888885 3  2466777776554  


Q ss_pred             -CcceEEEecCCCCCHhh
Q 018244          126 -DERLLVAEYMPNDTLAK  142 (359)
Q Consensus       126 -~~~~lv~e~~~~gsL~~  142 (359)
                       +..++||||++|.++.+
T Consensus       105 ~g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          105 LGTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             TSSCEEEEECCCCBCCCB
T ss_pred             cCCceEEEEecCCCChhh
Confidence             34689999999876653

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.38  E-value=1.8e-06  Score=80.05  Aligned_cols=76  Identities=13%  Similarity=0.056  Sum_probs=49.6

Q ss_pred             ccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCC-------chHHHHHHHHHHHhcCCC--cc-cccccceeeeCCcce
Q 018244           61 IVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-------PDARQFLEEARAVGQLRN--RR-LANLLGCCCEGDERL  129 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~n-iv~~~~~~~~~~~~~  129 (359)
                      .++.+|.|..+.||++... ++..++||.......       .....+..|.++|+.+..  +. +.+++.+  +.+..+
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~  111 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV  111 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred             EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccE
Confidence            3567899999999999743 467899998653211       123456778888887732  33 3445433  455678


Q ss_pred             EEEecCCCC
Q 018244          130 LVAEYMPND  138 (359)
Q Consensus       130 lv~e~~~~g  138 (359)
                      +||||+++.
T Consensus       112 lvmE~l~g~  120 (397)
T 2olc_A          112 TVMEDLSHL  120 (397)
T ss_dssp             EEECCCTTS
T ss_pred             EEEEeCCCc
Confidence            999999764

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.37  E-value=2.7e-06  Score=76.91  Aligned_cols=138  Identities=9%  Similarity=0.104  Sum_probs=78.4

Q ss_pred             cccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCc--ccccccc------eeeeCCcceEEEe
Q 018244           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNR--RLANLLG------CCCEGDERLLVAE  133 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~------~~~~~~~~~lv~e  133 (359)
                      +..++.|..+.||+....+| .+++|+....    ...+..|..++..|...  .+++++.      +....+..+++|+
T Consensus        37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~  111 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD  111 (346)
T ss_dssp             EEECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred             eeeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence            34456677899999987665 5899998752    23344455555555311  2333332      1234567889999


Q ss_pred             cCCCCCHh--------------hhhhc--CC---C-------CCCCHHH-------------------------------
Q 018244          134 YMPNDTLA--------------KHLFH--WE---T-------QPMKWAM-------------------------------  156 (359)
Q Consensus       134 ~~~~gsL~--------------~~l~~--~~---~-------~~l~~~~-------------------------------  156 (359)
                      |++|.++.              ..++.  ..   .       ....|..                               
T Consensus       112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  191 (346)
T 2q83_A          112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE  191 (346)
T ss_dssp             CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred             eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence            99986432              01111  00   0       0112221                               


Q ss_pred             HHHHHHHHHHHHHHhhc------------CCCcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          157 RLRVALHIAEALEYCTS------------KERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       157 ~~~i~~qi~~~L~~LH~------------~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                      +..+...+..++.+|+.            ...++|+|+++.||+++.++.+.|+||+.+.
T Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            11111223345556642            2489999999999999888899999999764

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=98.10  E-value=1.8e-05  Score=65.73  Aligned_cols=141  Identities=12%  Similarity=0.022  Sum_probs=93.0

Q ss_pred             CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCcCCCcc
Q 018244          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA  217 (359)
Q Consensus       138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~t~~  217 (359)
                      -||.+.|.. .+.+++++++|.+++|.+.+|.-+-....-..+=+-|..|++..+|.|.+.+ +.+.        .....
T Consensus        33 vSL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------~~~~~  102 (229)
T 2yle_A           33 LSLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD--------AGEPP  102 (229)
T ss_dssp             EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred             ccHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc--------ccccC
Confidence            378888865 6779999999999999999997762210112233457889999999988874 2111        12335


Q ss_pred             ccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHhccc--
Q 018244          218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY--  295 (359)
Q Consensus       218 y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~--  295 (359)
                      +.|||... ...+.+.=|||||+++|.-+--..+.                       ......++.|.+||..|...  
T Consensus       103 ~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e-----------------------~eE~eLS~~LE~LL~~Mt~~~~  158 (229)
T 2yle_A          103 PVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE-----------------------NEERELSPPLEQLIDHMANTVE  158 (229)
T ss_dssp             ----CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT-----------------------TEEECCCHHHHHHHHHHTTCCC
T ss_pred             CCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc-----------------------ccchhhCHHHHHHHHHHHhccc
Confidence            67888764 34567888999999999888544221                       11244567788899888766  


Q ss_pred             -----------------------CCCCCCCHHHHHHHHHH
Q 018244          296 -----------------------EPRERPNPRSLVTALVT  312 (359)
Q Consensus       296 -----------------------dp~~Rps~~~il~~L~~  312 (359)
                                             .+..|+|.++|++.=..
T Consensus       159 d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~  198 (229)
T 2yle_A          159 ADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAA  198 (229)
T ss_dssp             --------------------CCSCCCCCCSHHHHHHHHHT
T ss_pred             ccccccccccccccccccccccccccCcCCHHHHHHHHHh
Confidence                                   24678899998876554

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=98.09  E-value=8.9e-06  Score=71.84  Aligned_cols=75  Identities=23%  Similarity=0.275  Sum_probs=54.5

Q ss_pred             ccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCc---ccccccceeeeCCcceEEEecCCC
Q 018244           61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNR---RLANLLGCCCEGDERLLVAEYMPN  137 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~~~  137 (359)
                      -++.+|.|..+.||+.+..+|+.|.+|+...........+..|...|+.|.-.   .+++++++    +.-++||||+++
T Consensus        19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~   94 (288)
T 3f7w_A           19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDE   94 (288)
T ss_dssp             EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCC
T ss_pred             EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecc
Confidence            45667999999999999999999999987655433345678899998888422   23444433    235889999987


Q ss_pred             CC
Q 018244          138 DT  139 (359)
Q Consensus       138 gs  139 (359)
                      +.
T Consensus        95 ~~   96 (288)
T 3f7w_A           95 RP   96 (288)
T ss_dssp             CC
T ss_pred             cC
Confidence            64

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.97  E-value=2.7e-05  Score=69.52  Aligned_cols=75  Identities=17%  Similarity=0.081  Sum_probs=58.5

Q ss_pred             cccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC---CcccccccceeeeCCcceEEEecCCCC
Q 018244           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      +..++.|....+|+.... +..+++|+....   ....+..|...|+.|.   ...+++++.+....+..++||||+++.
T Consensus        41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~  116 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS  116 (312)
T ss_dssp             EEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred             eEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence            455689999999999864 557888987643   2556788998888884   356788888887778899999999987


Q ss_pred             CH
Q 018244          139 TL  140 (359)
Q Consensus       139 sL  140 (359)
                      .+
T Consensus       117 ~~  118 (312)
T 3jr1_A          117 KN  118 (312)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.90  E-value=8.3e-05  Score=69.33  Aligned_cols=76  Identities=13%  Similarity=0.053  Sum_probs=46.6

Q ss_pred             hcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCcC---C--CccccCcccccCC---CCCCccchhhHHHHHH
Q 018244          172 TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS---T--NLAFTPPEYLRTG---RVTPESVMYSFGTLLL  243 (359)
Q Consensus       172 H~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~~---~--t~~y~aPE~~~~~---~~~~~~Di~slG~il~  243 (359)
                      +.. .++|+|++|.||+++.++ +.|+||+.+......-...   .  ...|.+|+.....   .-....++.+....+|
T Consensus       230 ~~~-~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (420)
T 2pyw_A          230 RAQ-ALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW  307 (420)
T ss_dssp             BCC-EEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred             CCC-eEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence            344 899999999999998776 9999999887544321110   0  1245555544311   1112234556777777


Q ss_pred             HHHhCC
Q 018244          244 DLLSGK  249 (359)
Q Consensus       244 elltg~  249 (359)
                      +.+++.
T Consensus       308 ~~y~~~  313 (420)
T 2pyw_A          308 NLFNKR  313 (420)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            776543

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.79  E-value=0.00011  Score=65.84  Aligned_cols=160  Identities=11%  Similarity=0.122  Sum_probs=86.6

Q ss_pred             cccCHHHHHHHhcCCCcc--cccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcc--ccc
Q 018244           42 CEYSIETLRTATSGFAME--NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LAN  117 (359)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~--~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~  117 (359)
                      ..++.+++...-..|...  .-++.++.|....+|+....+| .+++|......  ....+..|+.++..+...+  +.+
T Consensus         5 ~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~   81 (322)
T 2ppq_A            5 TDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPL   81 (322)
T ss_dssp             CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred             ccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCc
Confidence            345566666655555432  2345567788899999987666 58899887531  1234456777776663222  233


Q ss_pred             ccce------eeeCCcceEEEecCCCCCHhh--------------hhhc----CCCC---CC---CHHHHHH--------
Q 018244          118 LLGC------CCEGDERLLVAEYMPNDTLAK--------------HLFH----WETQ---PM---KWAMRLR--------  159 (359)
Q Consensus       118 ~~~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~----~~~~---~l---~~~~~~~--------  159 (359)
                      ++..      ....+..+++++|++|..+..              .++.    ....   ..   .|.....        
T Consensus        82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~  161 (322)
T 2ppq_A           82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE  161 (322)
T ss_dssp             BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred             ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence            3321      122355789999998854311              0110    0000   01   1221100        


Q ss_pred             ----HHHHHHHHHHHhhc------CCCcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          160 ----VALHIAEALEYCTS------KERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       160 ----i~~qi~~~L~~LH~------~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                          +...+...+..+..      ..+++|+|+++.||++++++.+.|+||+.+.
T Consensus       162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence                00113334444432      1368999999999999977656899999764

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.74  E-value=6.4e-05  Score=66.72  Aligned_cols=71  Identities=14%  Similarity=0.159  Sum_probs=43.4

Q ss_pred             cccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCccc-ccccceeeeCCcceEEEecC-CCCC
Q 018244           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLVAEYM-PNDT  139 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~-~~gs  139 (359)
                      ++.++.|..+.+|+.     ..+.+|+....... .....+|+.+++.+...++ .+++++  +.+..++++||+ ++.+
T Consensus        23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~   94 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT   94 (301)
T ss_dssp             CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred             eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence            556688888999999     35888988653211 1122457777777643333 344443  344568999999 6544


Q ss_pred             H
Q 018244          140 L  140 (359)
Q Consensus       140 L  140 (359)
                      +
T Consensus        95 l   95 (301)
T 3dxq_A           95 M   95 (301)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.68  E-value=0.00019  Score=64.62  Aligned_cols=32  Identities=13%  Similarity=0.084  Sum_probs=27.4

Q ss_pred             CcccccCCCCCeeeCCC----CCeEEeccCCcccCC
Q 018244          176 RALYHDLNAYRIVFDDD----VNPRLSCFGLMKNSR  207 (359)
Q Consensus       176 ~ivH~Dikp~NIll~~~----~~~kl~DFg~a~~~~  207 (359)
                      .++|+|+++.||+++.+    +.+.|+||+.+....
T Consensus       184 ~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~  219 (333)
T 3csv_A          184 VFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH  219 (333)
T ss_dssp             EEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred             eeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence            78999999999999874    679999999876543

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.67  E-value=0.00094  Score=59.73  Aligned_cols=139  Identities=19%  Similarity=0.153  Sum_probs=79.8

Q ss_pred             ccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcc--cccccce-----eeeCCcceEEEecC
Q 018244           63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANLLGC-----CCEGDERLLVAEYM  135 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~-----~~~~~~~~lv~e~~  135 (359)
                      ..++ |....||+....+|..+++|....... ....+..|..++..+....  +++++..     ....+..+++|+|+
T Consensus        32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i  109 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV  109 (328)
T ss_dssp             EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred             Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence            3456 778899998877777799999874322 2455667888877774222  3444432     12234567899999


Q ss_pred             CCCCHhh-----------h---hhc----CC---CCCCCHHHH----------------------HHHHHHHHHHHHHhh
Q 018244          136 PNDTLAK-----------H---LFH----WE---TQPMKWAMR----------------------LRVALHIAEALEYCT  172 (359)
Q Consensus       136 ~~gsL~~-----------~---l~~----~~---~~~l~~~~~----------------------~~i~~qi~~~L~~LH  172 (359)
                      +|.++..           .   ++.    ..   ....++...                      ...+..++..+.-+-
T Consensus       110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  189 (328)
T 1zyl_A          110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW  189 (328)
T ss_dssp             CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            8754320           0   000    00   011222111                      111122222222221


Q ss_pred             ---cCCCcccccCCCCCeeeCCCCCeEEeccCCccc
Q 018244          173 ---SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (359)
Q Consensus       173 ---~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~  205 (359)
                         ....++|+|+++.||+++ + .+.|+||+.+..
T Consensus       190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence               112679999999999999 4 899999998654

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.55  E-value=0.00019  Score=67.13  Aligned_cols=73  Identities=18%  Similarity=0.315  Sum_probs=49.0

Q ss_pred             cccCCCCCCcEEEEEEeCC--------CcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCccc-ccccceeeeCCcceEEE
Q 018244           62 VSEHGEKAPNVVYKGKLEN--------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLVA  132 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~  132 (359)
                      +..++.|....||++...+        +..+.+|+......  ...+.+|..+++.+...++ +++++.+.  +  .+|+
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~  151 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLE  151 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEE
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEE
Confidence            4456788889999998653        46899998843221  2455679998888853333 55665543  2  3899


Q ss_pred             ecCCCCCH
Q 018244          133 EYMPNDTL  140 (359)
Q Consensus       133 e~~~~gsL  140 (359)
                      ||++|.+|
T Consensus       152 e~l~G~~l  159 (429)
T 1nw1_A          152 EYIPSRPL  159 (429)
T ss_dssp             CCCCEEEC
T ss_pred             EEeCCccc
Confidence            99986443

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.48  E-value=0.00022  Score=65.41  Aligned_cols=139  Identities=14%  Similarity=0.132  Sum_probs=82.5

Q ss_pred             cccCCCCCCcEEEEEEeC--------CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEEE
Q 018244           62 VSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ++.+..|-...+|++...        ++..+.+|+.... ........+|..+++.|. +.-..++++.+.+    .+||
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~  129 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE  129 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence            345667888899999864        2468999986432 223556678999998885 3223556655532    3999


Q ss_pred             ecCCCCCHhhh--------------h---hcC---CCCCCC--HHHHHHHHHHHHH-------------------HHHHh
Q 018244          133 EYMPNDTLAKH--------------L---FHW---ETQPMK--WAMRLRVALHIAE-------------------ALEYC  171 (359)
Q Consensus       133 e~~~~gsL~~~--------------l---~~~---~~~~l~--~~~~~~i~~qi~~-------------------~L~~L  171 (359)
                      ||++|.+|...              |   +..   -.....  +.++.++..++..                   .+..|
T Consensus       130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L  209 (379)
T 3feg_A          130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL  209 (379)
T ss_dssp             ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred             EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence            99988654321              0   000   011222  4566666655432                   12222


Q ss_pred             ----hc---CCCcccccCCCCCeeeCCC----CCeEEeccCCccc
Q 018244          172 ----TS---KERALYHDLNAYRIVFDDD----VNPRLSCFGLMKN  205 (359)
Q Consensus       172 ----H~---~~~ivH~Dikp~NIll~~~----~~~kl~DFg~a~~  205 (359)
                          ..   ...++|+|+.+.||+++.+    +.+.|+||..+..
T Consensus       210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence                21   1358999999999999876    7899999998653

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.37  E-value=0.00028  Score=64.44  Aligned_cols=74  Identities=14%  Similarity=0.215  Sum_probs=43.7

Q ss_pred             cccCCCCCCcEEEEEEeCC---------CcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcc-cccccceeeeCCcceEE
Q 018244           62 VSEHGEKAPNVVYKGKLEN---------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR-LANLLGCCCEGDERLLV  131 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv  131 (359)
                      +..++.|....+|+....+         +..+++|+..... ........|..+++.+...+ ..++++..    .-++|
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v  112 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRI  112 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEE
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEec----CCcEE
Confidence            4566888889999998654         2578888875432 11112356788887775333 34555443    24789


Q ss_pred             EecCCCCCH
Q 018244          132 AEYMPNDTL  140 (359)
Q Consensus       132 ~e~~~~gsL  140 (359)
                      |||++|.++
T Consensus       113 ~e~i~G~~l  121 (369)
T 3c5i_A          113 EEWLYGDPL  121 (369)
T ss_dssp             EECCCSEEC
T ss_pred             EEEecCCcC
Confidence            999987543

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=97.36  E-value=0.004  Score=56.08  Aligned_cols=32  Identities=6%  Similarity=-0.047  Sum_probs=27.9

Q ss_pred             CCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       175 ~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      ..++|+|+.+.||++++++.+.|+||+.+...
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~  237 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA  237 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence            36899999999999998888999999876643

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=97.24  E-value=0.00077  Score=63.38  Aligned_cols=74  Identities=14%  Similarity=0.086  Sum_probs=46.3

Q ss_pred             cccCCCCCCcEEEEEEeCC-CcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCccc-ccccceeeeCCcceEEEecCCCCC
Q 018244           62 VSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLVAEYMPNDT  139 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~gs  139 (359)
                      +..|+.|-...+|+....+ +..+.+|+....... .-.-.+|..++..|...++ .++++.+.  +  .+|+||++|.+
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~  187 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA  187 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence            3456778889999998765 467889987543211 1112578888888864444 45666552  2  35999998754


Q ss_pred             H
Q 018244          140 L  140 (359)
Q Consensus       140 L  140 (359)
                      |
T Consensus       188 l  188 (458)
T 2qg7_A          188 L  188 (458)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=96.61  E-value=0.0062  Score=56.52  Aligned_cols=139  Identities=13%  Similarity=0.084  Sum_probs=82.8

Q ss_pred             ccccCCCCCCcEEEEEEeCC--------CcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcc-cccccceeeeCCcceEE
Q 018244           61 IVSEHGEKAPNVVYKGKLEN--------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR-LANLLGCCCEGDERLLV  131 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv  131 (359)
                      -++.+..|-...+|+....+        +..+.+++..... ...-...+|..+++.+.-.+ ..++++.+    .-++|
T Consensus        74 ~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I  148 (424)
T 3mes_A           74 EVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF----PEGRI  148 (424)
T ss_dssp             EEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEE
T ss_pred             EEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEE
Confidence            34566778889999998753        5679999865432 11112356888887774223 34455433    24789


Q ss_pred             EecCCCCCHhhh-h-------------h---c--C---------CCCCCCHHHHHHHHHHHHH-----------------
Q 018244          132 AEYMPNDTLAKH-L-------------F---H--W---------ETQPMKWAMRLRVALHIAE-----------------  166 (359)
Q Consensus       132 ~e~~~~gsL~~~-l-------------~---~--~---------~~~~l~~~~~~~i~~qi~~-----------------  166 (359)
                      +||++|.+|... +             .   .  .         ...+.-+.++..+..++-.                 
T Consensus       149 ~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l  228 (424)
T 3mes_A          149 EEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKI  228 (424)
T ss_dssp             EECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHH
T ss_pred             EEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHH
Confidence            999998654210 0             0   0  0         1111124555555433321                 


Q ss_pred             --HHHHhh--------------------c---CCCcccccCCCCCeeeCCCCCeEEeccCCccc
Q 018244          167 --ALEYCT--------------------S---KERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (359)
Q Consensus       167 --~L~~LH--------------------~---~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~  205 (359)
                        .+..|.                    .   ...++|+|+.+.||+ +.++.+.|+||..+..
T Consensus       229 ~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          229 LEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             HHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence              222221                    1   125799999999999 7788999999998753

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=94.18  E-value=0.035  Score=51.10  Aligned_cols=29  Identities=14%  Similarity=0.056  Sum_probs=24.6

Q ss_pred             cccccCCCCCeee------CCCCCeEEeccCCccc
Q 018244          177 ALYHDLNAYRIVF------DDDVNPRLSCFGLMKN  205 (359)
Q Consensus       177 ivH~Dikp~NIll------~~~~~~kl~DFg~a~~  205 (359)
                      ++|+|+.+.|||+      +++..+.++||..|..
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            5799999999999      4567799999998754

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=91.97  E-value=0.31  Score=40.32  Aligned_cols=114  Identities=15%  Similarity=0.142  Sum_probs=75.3

Q ss_pred             CCcccccccceeeeCCcceEEEecCCCC-CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeee
Q 018244          111 RNRRLANLLGCCCEGDERLLVAEYMPND-TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF  189 (359)
Q Consensus       111 ~h~niv~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll  189 (359)
                      .||+.+.. .+-...+.+.|.++.-+.+ ++.. +     ..++...+++++.+|+....+++..   +|--++|+||++
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i-----k~~~~~eKlr~l~ni~~l~~~~~~r---~tf~L~P~NL~f  112 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I-----KSFTKNEKLRYLLNIKNLEEVNRTR---YTFVLAPDELFF  112 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G-----GGSCHHHHHHHHHHGGGGGGGGGSS---EECCCSGGGEEE
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H-----HhcCHHHHHHHHHHHHHHHHHhcCc---eEEEEecceEEE
Confidence            57777765 4445556666666654322 2222 3     2478889999999999888666544   788999999999


Q ss_pred             CCCCCeEEeccCCcccCCCCCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCC
Q 018244          190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP  252 (359)
Q Consensus       190 ~~~~~~kl~DFg~a~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~  252 (359)
                      +.++.+++.-.|+...             ++|.     ..+...=.-.+=+++..+++++..|
T Consensus       113 ~~~~~p~i~~RGik~~-------------l~P~-----~~~ee~fL~qyKAliiall~~K~~F  157 (215)
T 4ann_A          113 TRDGLPIAKTRGLQNV-------------VDPL-----PVSEAEFLTRYKALVICAFNEKQSF  157 (215)
T ss_dssp             CTTSCEEESCCEETTT-------------BSCC-----CCCHHHHHHHHHHHHHHHHCTTCCH
T ss_pred             cCCCCEEEEEccCccC-------------CCCC-----CCCHHHHHHHHHHHHHHHHcCCCCH
Confidence            9999999998876432             2222     1122222335677888899887443

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=91.62  E-value=0.46  Score=39.38  Aligned_cols=112  Identities=15%  Similarity=0.215  Sum_probs=73.8

Q ss_pred             CCcccccccceeeeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHH-HhhcCCCcccccCCCCCeee
Q 018244          111 RNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALE-YCTSKERALYHDLNAYRIVF  189 (359)
Q Consensus       111 ~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~-~LH~~~~ivH~Dikp~NIll  189 (359)
                      .||++  -..+-.+.+.+.|.++.-+++.=...++     .++...+++++.+|+.... +++..   +|--++|+||++
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-----~~~~~eKlrll~nl~~L~~~~~~~r---~tf~l~P~NL~f  117 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-----KTTLLSRIRAAIHLVSKVKHHSARR---LIFIVCPENLMF  117 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-----TSCHHHHHHHHHHHHHHHSSCCSSS---EECCCCGGGEEE
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-----hcCHHHHHHHHHHHHHHHHHhhhCc---eeEEEeCceEEE
Confidence            56776  3334455667777777654433333342     4788999999999988776 55544   788899999999


Q ss_pred             CCCCCeEEeccCCcccCCCCCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCC
Q 018244          190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH  250 (359)
Q Consensus       190 ~~~~~~kl~DFg~a~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~  250 (359)
                      +.++.+++.-.|+-..             ++|..+     +..-=.-++=+++..++.++.
T Consensus       118 ~~~~~p~i~hRGi~~~-------------lpP~e~-----~ee~fl~qyKali~all~~K~  160 (219)
T 4ano_A          118 NRALEPFFLHVGVKES-------------LPPDEW-----DDERLLREVKATVLALTEGEY  160 (219)
T ss_dssp             CTTCCEEESCCEETTT-------------BSSCSC-----CHHHHHHHHHHHHHHHTTCSS
T ss_pred             eCCCcEEEEEcCCccc-------------CCCCCC-----CHHHHHHHHHHHHHHHHcCCC
Confidence            9999999998886332             333221     111122346678888888764

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=86.24  E-value=0.099  Score=49.06  Aligned_cols=61  Identities=5%  Similarity=0.011  Sum_probs=17.9

Q ss_pred             cccccCCCCCCcEEEEEEeCC-CcEEEE------EEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceee
Q 018244           60 NIVSEHGEKAPNVVYKGKLEN-QFRIAV------KRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCC  123 (359)
Q Consensus        60 ~~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~  123 (359)
                      .+.+.+|   ||.||+|.+.. ...||+      |.......  .....+.+|..+++.++|+|+++.+++..
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred             cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence            4455666   99999999654 357888      66654221  22345788889999999999999987664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	359
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-42
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-42
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-41
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-39
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-39
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-38
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-38
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	7e-38
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-36
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	5e-36
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-36
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-35
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-35
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	6e-35
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	7e-35
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-34
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-34
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-33
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-33
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-33
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-32
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-32
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-32
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-32
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-31
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-31
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-31
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	5e-31
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	8e-31
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-30
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-29
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-28
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-28
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	5e-28
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-27
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-26
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-26
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-26
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-25
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-25
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-25
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-25
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-23
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-23
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-23
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	5e-23
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	7e-23
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-22
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-22
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	9e-22
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-21
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-21
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-20
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-19
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-19
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	3e-18
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-17
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-16
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-14
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	7e-14
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-13
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-13
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-06

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (369), Expect = 2e-42
 Identities = 56/245 (22%), Positives = 106/245 (43%), Gaps = 12/245 (4%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VV  GK   Q+ +A+K     +  +  +F+EEA+ +  L + +L  L G C +     ++
Sbjct: 19  VVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 77

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM N  L  +L        +    L +   + EA+EY  SK + L+ DL A   + +D
Sbjct: 78  TEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVND 135

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
               ++S FGL +   D    S+      + ++PPE L   + + +S +++FG L+ ++ 
Sbjct: 136 QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 195

Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
           S   +P         +          L          ++  +   C   +  ERP  + L
Sbjct: 196 SLGKMPYER----FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 251

Query: 307 VTALV 311
           ++ ++
Sbjct: 252 LSNIL 256

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (367), Expect = 5e-42
 Identities = 52/249 (20%), Positives = 105/249 (42%), Gaps = 12/249 (4%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           +V+ G   N+ ++A+K     A  +   F+EEA  + +L + +L  L G C E     LV
Sbjct: 20  LVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 78

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M +  L+ +    +         L + L + E + Y       ++ DL A   +  +
Sbjct: 79  FEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGE 136

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
           +   ++S FG+ +   D +  S+      + +  PE     R + +S ++SFG L+ ++ 
Sbjct: 137 NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196

Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
           S   IP  +  +     +I     +           T + ++ + C +  P +RP    L
Sbjct: 197 SEGKIPYENRSNSEVVEDIS----TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 252

Query: 307 VTALVTLQK 315
           +  L  + +
Sbjct: 253 LRQLAEIAE 261

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (360), Expect = 4e-41
 Identities = 62/251 (24%), Positives = 101/251 (40%), Gaps = 20/251 (7%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-L 130
            V  G      ++AVK     A   A+ FL EA  + QLR+  L  LLG   E    L +
Sbjct: 22  DVMLGDYRGN-KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 78

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
           V EYM   +L  +L       +     L+ +L + EA+EY       ++ DL A  ++  
Sbjct: 79  VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVS 137

Query: 191 DDVNPRLSCFGLMKN-SRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 249
           +D   ++S FGL K  S    +    + +T PE LR  + + +S ++SFG LL ++ S  
Sbjct: 138 EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 197

Query: 250 HIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 304
            +P         +  +         D C            +  +   C   +   RP+  
Sbjct: 198 RVPYPRIPLKDVVPRVEKGYKMDAPDGCPP---------AVYEVMKNCWHLDAAMRPSFL 248

Query: 305 SLVTALVTLQK 315
            L   L  ++ 
Sbjct: 249 QLREQLEHIKT 259

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  140 bits (353), Expect = 1e-39
 Identities = 55/255 (21%), Positives = 111/255 (43%), Gaps = 12/255 (4%)

Query: 72  VVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
            VY+G   +    +AVK        +  +FL+EA  + ++++  L  LLG C       +
Sbjct: 32  EVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
           + E+M    L  +L     Q +   + L +A  I+ A+EY   K   ++ DL A   +  
Sbjct: 91  ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVG 149

Query: 191 DDVNPRLSCFGLMKNSRDGRSYST-----NLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           ++   +++ FGL +        +       + +T PE L   + + +S +++FG LL ++
Sbjct: 150 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209

Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRS 305
            +     P   +DL     +  L +     +       ++  L   C Q+ P +RP+   
Sbjct: 210 ATYGM-SPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 265

Query: 306 LVTALVTLQKDTEVS 320
           +  A  T+ +++ +S
Sbjct: 266 IHQAFETMFQESSIS 280

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (349), Expect = 2e-39
 Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 22/249 (8%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
            V+ G      ++AVK   + +      FL EA  + QL+++RL  L     + +   ++
Sbjct: 28  EVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM N +L   L       +     L +A  IAE + +   +   ++ DL A  I+  D
Sbjct: 86  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSD 144

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
            ++ +++ FGL +   D    +       + +T PE +  G  T +S ++SFG LL +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204

Query: 247 SGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
           +   IP         +  +         D+C E         EL +L   C +  P +RP
Sbjct: 205 THGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRP 255

Query: 302 NPRSLVTAL 310
               L + L
Sbjct: 256 TFDYLRSVL 264

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  137 bits (347), Expect = 1e-38
 Identities = 57/293 (19%), Positives = 113/293 (38%), Gaps = 26/293 (8%)

Query: 44  YSIETLRTATSGFAMENIVSEH------GEKAPNVVYKGKL----ENQFRIAVKRFNRSA 93
           ++ E    A   FA E  +S        G      V  G L    + +  +A+K      
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 94  WPDA-RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPM 152
                R FL EA  +GQ  +  + +L G   +    +++ E+M N +L            
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQF 125

Query: 153 KWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 212
                + +   IA  ++Y       ++ DL A  I+ + ++  ++S FGL +   D  S 
Sbjct: 126 TVIQLVGMLRGIAAGMKYLADM-NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184

Query: 213 STN---------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR 263
            T          + +T PE ++  + T  S ++S+G ++ +++S    P       + ++
Sbjct: 185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD----MTNQ 240

Query: 264 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
           ++    +         D  + L +L   C Q +   RP    +V  L  + ++
Sbjct: 241 DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 293

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (345), Expect = 1e-38
 Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 12/244 (4%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
            V+ G      R+A+K            FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 32  EVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 89

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y       ++ DL A  I+  +
Sbjct: 90  TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGE 148

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
           ++  +++ FGL +   D    +       + +T PE    GR T +S ++SFG LL +L 
Sbjct: 149 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 208

Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
           +   +P       + +R +    +         +    L  L  +C + EP ERP    L
Sbjct: 209 TKGRVPYPG----MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 264

Query: 307 VTAL 310
              L
Sbjct: 265 QAFL 268

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (339), Expect = 7e-38
 Identities = 50/257 (19%), Positives = 105/257 (40%), Gaps = 20/257 (7%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
            VYKGK      + +           + F  E   + + R+  +   +G      +  +V
Sbjct: 23  TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTAPQLAIV 81

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            ++    +L  HL   ET   +    + +A   A+ ++Y  +K   ++ DL +  I   +
Sbjct: 82  TQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFLHE 139

Query: 192 DVNPRLSCFGL--MKNSRDGRSYSTNLAFTP----PEYLRT---GRVTPESVMYSFGTLL 242
           D+  ++  FGL  +K+   G      L+ +     PE +R       + +S +Y+FG +L
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199

Query: 243 LDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298
            +L++G+    +I     +  +  R   +   S +           + RL + CL+ +  
Sbjct: 200 YELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRD 255

Query: 299 ERPNPRSLVTALVTLQK 315
           ERP    ++ ++  L +
Sbjct: 256 ERPLFPQILASIELLAR 272

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (329), Expect = 1e-36
 Identities = 55/260 (21%), Positives = 100/260 (38%), Gaps = 17/260 (6%)

Query: 56  FAMEN--IVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDA---RQFLEEARAVGQ 109
           +A+E+  I    G+     VY  +  +++F +A+K   ++    A    Q   E      
Sbjct: 3   WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 62

Query: 110 LRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALE 169
           LR+  +  L G   +     L+ EY P  T+ + L                   +A AL 
Sbjct: 63  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALS 120

Query: 170 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--LAFTPPEYLRTG 227
           YC SK R ++ D+    ++       +++ FG   ++   R  +    L + PPE +   
Sbjct: 121 YCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 179

Query: 228 RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287
               +  ++S G L  + L GK    ++       R  +      +E  F          
Sbjct: 180 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------VEFTFPDFVTEGARD 233

Query: 288 LASRCLQYEPRERPNPRSLV 307
           L SR L++ P +RP  R ++
Sbjct: 234 LISRLLKHNPSQRPMLREVL 253

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (330), Expect = 5e-36
 Identities = 49/277 (17%), Positives = 98/277 (35%), Gaps = 44/277 (15%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
           VV+K     +   +A K  +    P  R Q + E + + +  +  +    G      E  
Sbjct: 21  VVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 80

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
           +  E+M   +L + L   +   +   +  +V++ + + L Y   K + ++ D+    I+ 
Sbjct: 81  ICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138

Query: 190 DDDVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           +     +L  FG+     D  + S     ++  PE L+    + +S ++S G  L+++  
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198

Query: 248 GKH-IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT----------------------- 283
           G++ IPP  A +L      Q   D+          G                        
Sbjct: 199 GRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV 258

Query: 284 --------------ELVRLASRCLQYEPRERPNPRSL 306
                         E     ++CL   P ER + + L
Sbjct: 259 NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (328), Expect = 5e-36
 Identities = 57/265 (21%), Positives = 110/265 (41%), Gaps = 36/265 (13%)

Query: 72  VVYKGKL------ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCE 124
           +VY+G        E + R+A+K  N +A    R +FL EA  + +     +  LLG   +
Sbjct: 35  MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 94

Query: 125 GDERLLVAEYMPNDTLAKHLFHW--------ETQPMKWAMRLRVALHIAEALEYCTSKER 176
           G   L++ E M    L  +L              P   +  +++A  IA+ + Y  +  +
Sbjct: 95  GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-K 153

Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVT 230
            ++ DL A   +  +D   ++  FG+ ++  +   Y         + +  PE L+ G  T
Sbjct: 154 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 213

Query: 231 PESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285
             S ++SFG +L ++ +    P         L  + +  +    D+C +          L
Sbjct: 214 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------ML 264

Query: 286 VRLASRCLQYEPRERPNPRSLVTAL 310
             L   C QY P+ RP+   +++++
Sbjct: 265 FELMRMCWQYNPKMRPSFLEIISSI 289

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (321), Expect = 3e-35
 Identities = 53/256 (20%), Positives = 97/256 (37%), Gaps = 30/256 (11%)

Query: 72  VVYKGKLENQ---FRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGD 126
            V KG  + +     +AVK     A   A   + L EA  + QL N  +  ++G C E +
Sbjct: 22  TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 80

Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             +LV E      L K+L   + + +K    + +   ++  ++Y       ++ DL A  
Sbjct: 81  SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARN 137

Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFG 239
           ++       ++S FGL K  R   +Y          + +  PE +   + + +S ++SFG
Sbjct: 138 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 197

Query: 240 TLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294
            L+ +  S    P      S    ++           C           E+  L + C  
Sbjct: 198 VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR---------EMYDLMNLCWT 248

Query: 295 YEPRERPNPRSLVTAL 310
           Y+   RP   ++   L
Sbjct: 249 YDVENRPGFAAVELRL 264

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (321), Expect = 4e-35
 Identities = 52/255 (20%), Positives = 97/255 (38%), Gaps = 28/255 (10%)

Query: 72  VVYKGKL---ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
            V +G     + Q  +A+K   +     D  + + EA+ + QL N  +  L+G C + + 
Sbjct: 24  SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEA 82

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
            +LV E      L K L     + +  +    +   ++  ++Y   K   ++ DL A  +
Sbjct: 83  LMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNV 140

Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFGT 240
           +  +    ++S FGL K      SY T        L +  PE +   + +  S ++S+G 
Sbjct: 141 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGV 200

Query: 241 LLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295
            + + LS    P         +  I           C           EL  L S C  Y
Sbjct: 201 TMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWIY 251

Query: 296 EPRERPNPRSLVTAL 310
           +  +RP+  ++   +
Sbjct: 252 KWEDRPDFLTVEQRM 266

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (321), Expect = 6e-35
 Identities = 60/262 (22%), Positives = 109/262 (41%), Gaps = 26/262 (9%)

Query: 72  VVYKGKLEN----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
            VY G L +    +   AVK  NR     +  QFL E   +    +  + +LLG C   +
Sbjct: 42  CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE 101

Query: 127 ER-LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
              L+V  YM +  L ++    ET        +   L +A+ +++  SK + ++ DL A 
Sbjct: 102 GSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAAR 159

Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYS 237
             + D+    +++ FGL ++  D    S +        + +   E L+T + T +S ++S
Sbjct: 160 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219

Query: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ---FSSDEGTELVRLASRCLQ 294
           FG LL +L++    P         D N   +T   L+G+           L  +  +C  
Sbjct: 220 FGVLLWELMTRGAPPYP-------DVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 272

Query: 295 YEPRERPNPRSLVTALVTLQKD 316
            +   RP+   LV+ +  +   
Sbjct: 273 PKAEMRPSFSELVSRISAIFST 294

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  127 bits (321), Expect = 7e-35
 Identities = 46/243 (18%), Positives = 84/243 (34%), Gaps = 14/243 (5%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
            VY  + + N   +A+K+ + S        +  ++E R + +LR+       GC      
Sbjct: 30  AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT 89

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
             LV EY           H   +P++      V     + L Y  S    ++ D+ A  I
Sbjct: 90  AWLVMEYCLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNI 146

Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLD 244
           +  +    +L  FG         S+     +  PE +     G+   +  ++S G   ++
Sbjct: 147 LLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 206

Query: 245 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 304
           L   K    +           Q  + +   G +S             CLQ  P++RP   
Sbjct: 207 LAERKPPLFNMNAMSALYHIAQNESPALQSGHWSE----YFRNFVDSCLQKIPQDRPTSE 262

Query: 305 SLV 307
            L+
Sbjct: 263 VLL 265

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  126 bits (318), Expect = 2e-34
 Identities = 59/279 (21%), Positives = 105/279 (37%), Gaps = 50/279 (17%)

Query: 72  VVYKGKLENQFR------IAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCE 124
            V++ +            +AVK     A  D +  F  EA  + +  N  +  LLG C  
Sbjct: 28  RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 87

Query: 125 GDERLLVAEYMPNDTLAKHLFHW----------------------ETQPMKWAMRLRVAL 162
           G    L+ EYM    L + L                            P+  A +L +A 
Sbjct: 88  GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIAR 147

Query: 163 HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------L 216
            +A  + Y + + + ++ DL     +  +++  +++ FGL +N      Y  +      +
Sbjct: 148 QVAAGMAYLSER-KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPI 206

Query: 217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDS 271
            + PPE +   R T ES ++++G +L ++ S    P         +  +RD NI    ++
Sbjct: 207 RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPEN 266

Query: 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
           C           EL  L   C    P +RP+  S+   L
Sbjct: 267 CPL---------ELYNLMRLCWSKLPADRPSFCSIHRIL 296

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (313), Expect = 4e-34
 Identities = 46/255 (18%), Positives = 87/255 (34%), Gaps = 28/255 (10%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
              K +   +   +  K  +  +  +A  +  + E   + +L++  +        +    
Sbjct: 19  RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNT 78

Query: 129 LL--VAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYH---- 180
            L  V EY     LA  +     E Q +     LRV   +  AL+ C  +    +     
Sbjct: 79  TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHR 138

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMY 236
           DL    +  D   N +L  FGL +      S++     TP    PE +       +S ++
Sbjct: 139 DLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIW 198

Query: 237 SFGTLLLDLLSGKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292
           S G LL +L +                IR+   + +     +         EL  + +R 
Sbjct: 199 SLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSD---------ELNEIITRM 249

Query: 293 LQYEPRERPNPRSLV 307
           L  +   RP+   ++
Sbjct: 250 LNLKDYHRPSVEEIL 264

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (312), Expect = 1e-33
 Identities = 58/286 (20%), Positives = 110/286 (38%), Gaps = 34/286 (11%)

Query: 72  VVYKGKLEN---QFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRR-LANLLGCCCEGD 126
            V K +++    +   A+KR    A  D  R F  E   + +L +   + NLLG C    
Sbjct: 25  QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 84

Query: 127 ERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCT 172
              L  EY P+  L   L               +     +     L  A  +A  ++Y +
Sbjct: 85  YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 144

Query: 173 SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRV 229
            K + ++ DL A  I+  ++   +++ FGL +        +     + +   E L     
Sbjct: 145 QK-QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVY 203

Query: 230 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG---QFSSDEGTELV 286
           T  S ++S+G LL +++S    P               L +   +G   +   +   E+ 
Sbjct: 204 TTNSDVWSYGVLLWEIVSLGGTPY-------CGMTCAELYEKLPQGYRLEKPLNCDDEVY 256

Query: 287 RLASRCLQYEPRERPNPRSLVTALVTLQKDTEVSC-FLFSSQFTYA 331
            L  +C + +P ERP+   ++ +L  + ++ +         +FTYA
Sbjct: 257 DLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTLYEKFTYA 302

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (308), Expect = 3e-33
 Identities = 44/256 (17%), Positives = 90/256 (35%), Gaps = 15/256 (5%)

Query: 61  IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
           I+ E G+ A   VYK +  E     A K  +  +  +   ++ E   +    +  +  LL
Sbjct: 16  IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 75

Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
                 +   ++ E+     +   +   E +P+  +    V     +AL Y     + ++
Sbjct: 76  DAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDN-KIIH 133

Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST----NLAFTPPEYLRT-----GRVT 230
            DL A  I+F  D + +L+ FG+   +               +  PE +           
Sbjct: 134 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 193

Query: 231 PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290
            ++ ++S G  L+++   +  PP H L+ +R    +            S   +       
Sbjct: 194 YKADVWSLGITLIEMAEIE--PPHHELNPMRVLL-KIAKSEPPTLAQPSRWSSNFKDFLK 250

Query: 291 RCLQYEPRERPNPRSL 306
           +CL+     R     L
Sbjct: 251 KCLEKNVDARWTTSQL 266

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (310), Expect = 3e-33
 Identities = 48/259 (18%), Positives = 101/259 (38%), Gaps = 19/259 (7%)

Query: 72  VVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLLGCCCEG 125
            VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LLG C   
Sbjct: 24  TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 83

Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
             +L+  + MP   L  +        +     L   + IA+ + Y   + R ++ DL A 
Sbjct: 84  TVQLIT-QLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAAR 140

Query: 186 RIVFDDDVNPRLSCFGLMK--NSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFG 239
            ++     + +++ FGL K   + +   ++            E +     T +S ++S+G
Sbjct: 141 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 200

Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
             + +L++    P     D I    I ++ +             ++  +  +C   +   
Sbjct: 201 VTVWELMTFGSKPY----DGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADS 256

Query: 300 RPNPRSLVTALVTLQKDTE 318
           RP  R L+     + +D +
Sbjct: 257 RPKFRELIIEFSKMARDPQ 275

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (303), Expect = 3e-32
 Identities = 54/274 (19%), Positives = 99/274 (36%), Gaps = 39/274 (14%)

Query: 72  VVYKG------KLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCC 123
            V         K     ++AVK     A    R+  + E + + QL +   + NLLG C 
Sbjct: 52  KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 111

Query: 124 EGDERLLVAEYMPNDTLAKHLF---------------------HWETQPMKWAMRLRVAL 162
                 L+ EY     L  +L                        +   + +   L  A 
Sbjct: 112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAY 171

Query: 163 HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------L 216
            +A+ +E+   K   ++ DL A  ++       ++  FGL ++     +Y         +
Sbjct: 172 QVAKGMEFLEFK-SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPV 230

Query: 217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 276
            +  PE L  G  T +S ++S+G LL ++ S    P      +  D N   L  +  +  
Sbjct: 231 KWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP---GIPVDANFYKLIQNGFKMD 287

Query: 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
                  E+  +   C  ++ R+RP+  +L + L
Sbjct: 288 QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (302), Expect = 3e-32
 Identities = 49/244 (20%), Positives = 92/244 (37%), Gaps = 20/244 (8%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
            VY    +     +A+++ N    P     + E   + + +N  + N L     GDE  +
Sbjct: 35  TVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
           V EY+   +L   +       M       V     +ALE+  S  + ++ D+ +  I+  
Sbjct: 95  VMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLG 150

Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLL 246
            D + +L+ FG        +S  + +  TP    PE +      P+  ++S G + ++++
Sbjct: 151 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210

Query: 247 SGKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
            G+       P  AL LI       L       Q             +RCL  +  +R +
Sbjct: 211 EGEPPYLNENPLRALYLIATNGTPEL-------QNPEKLSAIFRDFLNRCLDMDVEKRGS 263

Query: 303 PRSL 306
            + L
Sbjct: 264 AKEL 267

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (300), Expect = 3e-32
 Identities = 53/278 (19%), Positives = 107/278 (38%), Gaps = 22/278 (7%)

Query: 54  SGFAMENIVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAWPDAR-QFLEEARAV 107
           S    + ++   G      VYKG L+      +  +A+K          R  FL EA  +
Sbjct: 7   SCVTRQKVI---GAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIM 63

Query: 108 GQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEA 167
           GQ  +  +  L G   +    +++ EYM N          +         + +   IA  
Sbjct: 64  GQFSHHNIIRLEGVISKYKPMMIITEYMENGA-LDKFLREKDGEFSVLQLVGMLRGIAAG 122

Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTP 220
           ++Y  +    ++ DL A  I+ + ++  ++S FGL +   D    +         + +T 
Sbjct: 123 MKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 181

Query: 221 PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280
           PE +   + T  S ++SFG ++ ++++    P       + +  +    +         D
Sbjct: 182 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE----LSNHEVMKAINDGFRLPTPMD 237

Query: 281 EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
             + + +L  +C Q E   RP    +V+ L  L +  +
Sbjct: 238 CPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 275

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (301), Expect = 4e-32
 Identities = 51/269 (18%), Positives = 94/269 (34%), Gaps = 34/269 (12%)

Query: 72  VVYKGKLENQFR------IAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCC 123
            V +       +      +AVK    SA    R+  + E + +  L N   + NLLG C 
Sbjct: 38  KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT 97

Query: 124 EGDERLLVAEYMPNDTLAKHLFHW----------------ETQPMKWAMRLRVALHIAEA 167
            G   L++ EY     L   L                   +   +     L  +  +A+ 
Sbjct: 98  IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKG 157

Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPP 221
           + +  SK   ++ DL A  I+       ++  FGL ++ ++  +Y         + +  P
Sbjct: 158 MAFLASK-NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216

Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
           E +     T ES ++S+G  L +L S    P      +  D     +             
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG---MPVDSKFYKMIKEGFRMLSPEHA 273

Query: 282 GTELVRLASRCLQYEPRERPNPRSLVTAL 310
             E+  +   C   +P +RP  + +V  +
Sbjct: 274 PAEMYDIMKTCWDADPLKRPTFKQIVQLI 302

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 2e-31
 Identities = 42/288 (14%), Positives = 91/288 (31%), Gaps = 50/288 (17%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEA--RAVGQLRNRRLANLLGCCCEGD--- 126
            V++GK   +  +AVK F+     + R +  EA       LR+  +   +    + +   
Sbjct: 18  EVWRGKWRGE-EVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 73

Query: 127 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC-------TSKERAL 178
            +  LV++Y  + +L  +L       +     +++AL  A  L +          K    
Sbjct: 74  TQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 130

Query: 179 YHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY----STNLAFTP----PEYLRT---- 226
           + DL +  I+   +    ++  GL                +   T     PE L      
Sbjct: 131 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 190

Query: 227 --GRVTPESVMYSFGTLLLDLLSGKHIPPSH---------------ALDLIRDRNIQTLT 269
                   + +Y+ G +  ++     I   H               +++ +R    +   
Sbjct: 191 KHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL 250

Query: 270 DSCLEGQFSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
              +  ++ S E    + ++   C       R     +   L  L + 
Sbjct: 251 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  119 bits (298), Expect = 3e-31
 Identities = 45/241 (18%), Positives = 77/241 (31%), Gaps = 10/241 (4%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           VV++          A K        D     +E + +  LR+  L NL     + +E ++
Sbjct: 41  VVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 100

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
           + E+M    L + +   E   M     +     + + L +       ++ DL    I+F 
Sbjct: 101 IYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFT 158

Query: 191 DDVNPR--LSCFGLMKNSRDGRSYST---NLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
              +    L  FGL  +    +S         F  PE      V   + M+S G L   L
Sbjct: 159 TKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 218

Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRS 305
           LSG    P    +           D  ++    S    +      + L  +P  R     
Sbjct: 219 LSGL--SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQ 276

Query: 306 L 306
            
Sbjct: 277 A 277

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (293), Expect = 3e-31
 Identities = 40/240 (16%), Positives = 73/240 (30%), Gaps = 15/240 (6%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERL 129
            V        +  +AVK  +     D  +   +E      L +  +    G   EG+ + 
Sbjct: 20  EVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 79

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
           L  EY     L   +       M      R    +   + Y        + D+    ++ 
Sbjct: 80  LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLL 136

Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESV-MYSFGTLL 242
           D+  N ++S FGL    R              L +  PE L+      E V ++S G +L
Sbjct: 137 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 196

Query: 243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
             +L+G+      +       + +         +        L+    + L   P  R  
Sbjct: 197 TAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH---KILVENPSARIT 253

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (291), Expect = 5e-31
 Identities = 51/263 (19%), Positives = 98/263 (37%), Gaps = 27/263 (10%)

Query: 72  VVYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
            V++G           +A+K          R+ FL+EA  + Q  +  +  L+G   E +
Sbjct: 22  DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N 80

Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
              ++ E      L +         +  A  +  A  ++ AL Y  SK R ++ D+ A  
Sbjct: 81  PVWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARN 138

Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEY-----LRTGRVTPESVMYSFGTL 241
           ++   +   +L  FGL +   D   Y  +    P ++     +   R T  S ++ FG  
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 198

Query: 242 LLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
           + ++L     P      +  +  I +     +  +C            L  L ++C  Y+
Sbjct: 199 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYD 249

Query: 297 PRERPNPRSLVTALVTLQKDTEV 319
           P  RP    L   L T+ ++ + 
Sbjct: 250 PSRRPRFTELKAQLSTILEEEKA 272

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (290), Expect = 8e-31
 Identities = 45/247 (18%), Positives = 90/247 (36%), Gaps = 17/247 (6%)

Query: 72  VVYKGKL-ENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
            VYKG   E    +A           +  ++F EEA  +  L++  +           + 
Sbjct: 24  TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG 83

Query: 129 ----LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
               +LV E M + TL  +L     + MK  +       I + L++  ++   + H DL 
Sbjct: 84  KKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLK 141

Query: 184 AYRIVFDD-DVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESVMYSFGT 240
              I       + ++   GL    R   + +      F  PE     +      +Y+FG 
Sbjct: 142 CDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGM 200

Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
            +L++ + ++ P S   +    +  + +T       F      E+  +   C++    ER
Sbjct: 201 CMLEMATSEY-PYSECQN--AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDER 257

Query: 301 PNPRSLV 307
            + + L+
Sbjct: 258 YSIKDLL 264

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (287), Expect = 2e-30
 Identities = 51/257 (19%), Positives = 91/257 (35%), Gaps = 20/257 (7%)

Query: 72  VVYKGKLE----NQFRIAVKRFNRSAWPDA---RQFLEEARAVGQLRNRRLANLLGCCCE 124
           VV +G+ +        +AVK               F+ E  A+  L +R L  L G    
Sbjct: 23  VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 82

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
              + +V E  P  +L                  R A+ +AE + Y  SK   ++ DL A
Sbjct: 83  PPMK-MVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-IHRDLAA 139

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYS 237
             ++       ++  FGLM+       +           A+  PE L+T   +  S  + 
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199

Query: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
           FG  L ++ +    P      L   + +  +           D   ++  +  +C  ++P
Sbjct: 200 FGVTLWEMFTYGQEPWI---GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKP 256

Query: 298 RERPNPRSLVTALVTLQ 314
            +RP   +L   L+  Q
Sbjct: 257 EDRPTFVALRDFLLEAQ 273

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  113 bits (283), Expect = 4e-29
 Identities = 49/244 (20%), Positives = 83/244 (34%), Gaps = 16/244 (6%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           VV++            K  N     D      E   + QL + +L NL     +  E +L
Sbjct: 44  VVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 103

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
           + E++    L   +   E   M  A  +       E L++       ++ D+    I+ +
Sbjct: 104 ILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCE 161

Query: 191 DDVNPR--LSCFGLMKNSRDGRS---YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
                   +  FGL             +    F  PE +    V   + M++ G L   L
Sbjct: 162 TKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVL 221

Query: 246 LSGKH-IPPSHALDLIRDRNIQTLTDSCLEGQFS--SDEGTELVRLASRCLQYEPRERPN 302
           LSG         L+ +  +N++       E  FS  S E  + ++     LQ EPR+R  
Sbjct: 222 LSGLSPFAGEDDLETL--QNVKRCDWEFDEDAFSSVSPEAKDFIK---NLLQKEPRKRLT 276

Query: 303 PRSL 306
               
Sbjct: 277 VHDA 280

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (276), Expect = 1e-28
 Identities = 40/255 (15%), Positives = 80/255 (31%), Gaps = 23/255 (9%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDA---RQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
            V   + L      A+K   +              E   + +L +     L     + ++
Sbjct: 23  TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK 82

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
                 Y  N  L K++                   I  ALEY   K   ++ DL    I
Sbjct: 83  LYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENI 139

Query: 188 VFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTL 241
           + ++D++ +++ FG  K            S+     +  PE L        S +++ G +
Sbjct: 140 LLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCI 199

Query: 242 LLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--ELVRLASRCLQYEPRE 299
           +  L++G   PP       R  N   +    ++ ++   E    +   L  + L  +  +
Sbjct: 200 IYQLVAGL--PP------FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 251

Query: 300 RPNPRSLVTALVTLQ 314
           R     +        
Sbjct: 252 RLGCEEMEGYGPLKA 266

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  110 bits (276), Expect = 2e-28
 Identities = 38/242 (15%), Positives = 73/242 (30%), Gaps = 11/242 (4%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERL 129
            V   +    Q  +A+K   + A          E   + ++++  +  L      G    
Sbjct: 24  EVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLY 83

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA--LYHDLNAYRI 187
           L+ + +    L   +   E          R+   + +A++Y              N    
Sbjct: 84  LIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYY 141

Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYST---NLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
             D+D    +S FGL K    G   ST      +  PE L     +     +S G +   
Sbjct: 142 SLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 201

Query: 245 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 304
           LL G   PP +  +  +        +   +  +  D            ++ +P +R    
Sbjct: 202 LLCGY--PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCE 259

Query: 305 SL 306
             
Sbjct: 260 QA 261

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  108 bits (271), Expect = 5e-28
 Identities = 45/245 (18%), Positives = 79/245 (32%), Gaps = 20/245 (8%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDA---RQFLEEARAVGQLRNRRLANLLGCCCE--- 124
            V+  + L     +AVK        D     +F  EA+    L +  +  +         
Sbjct: 22  EVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP 81

Query: 125 -GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN 183
            G    +V EY+   TL   +      PM     + V     +AL +       ++ D+ 
Sbjct: 82  AGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQN-GIIHRDVK 138

Query: 184 AYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNL-------AFTPPEYLRTGRVTPESVMY 236
              I+       ++  FG+ +   D  +  T          +  PE  R   V   S +Y
Sbjct: 139 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 198

Query: 237 SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
           S G +L ++L+G+  PP      +         D             +L  +  + L   
Sbjct: 199 SLGCVLYEVLTGE--PPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN 256

Query: 297 PRERP 301
           P  R 
Sbjct: 257 PENRY 261

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (271), Expect = 1e-27
 Identities = 40/258 (15%), Positives = 92/258 (35%), Gaps = 23/258 (8%)

Query: 61  IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
           I  + G     +V++     ++     K        D     +E   +   R+R + +L 
Sbjct: 9   IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLH 67

Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
                 +E +++ E++    + + + +     +     +     + EAL++  S     +
Sbjct: 68  ESFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSH-NIGH 125

Query: 180 HDLNAYRIVFDDDVNPR--LSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRVTPESV 234
            D+    I++    +    +  FG  +  + G ++        +  PE  +   V+  + 
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATD 185

Query: 235 MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE------GTELVRL 288
           M+S GTL+  LLSG +               Q + ++ +  +++ DE        E +  
Sbjct: 186 MWSLGTLVYVLLSGIN--------PFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDF 237

Query: 289 ASRCLQYEPRERPNPRSL 306
             R L  E + R      
Sbjct: 238 VDRLLVKERKSRMTASEA 255

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (263), Expect = 1e-26
 Identities = 48/271 (17%), Positives = 91/271 (33%), Gaps = 33/271 (12%)

Query: 72  VVYKG------KLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCC- 123
            V +       K      +AVK     A   + R  + E + +  + +      L   C 
Sbjct: 28  QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 87

Query: 124 -EGDERLLVAEYMPNDTLAKHLFH--------------WETQPMKWAMRLRVALHIAEAL 168
             G   +++ E+     L+ +L                     +     +  +  +A+ +
Sbjct: 88  KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGM 147

Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPE 222
           E+  S+ + ++ DL A  I+  +    ++  FGL ++      Y         L +  PE
Sbjct: 148 EFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 206

Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282
            +     T +S ++SFG LL ++ S    P      +  D             +      
Sbjct: 207 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP---GVKIDEEFCRRLKEGTRMRAPDYTT 263

Query: 283 TELVRLASRCLQYEPRERPNPRSLVTALVTL 313
            E+ +    C   EP +RP    LV  L  L
Sbjct: 264 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (260), Expect = 2e-26
 Identities = 52/269 (19%), Positives = 97/269 (36%), Gaps = 35/269 (13%)

Query: 72  VVYKGKL--------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGC 121
            V   +             ++AVK     A   D    + E   +  + +++ + NLLG 
Sbjct: 28  QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA 87

Query: 122 CCEGDERLLVAEYMPNDTLAKHLFHW--------------ETQPMKWAMRLRVALHIAEA 167
           C +     ++ EY     L ++L                   + +     +  A  +A  
Sbjct: 88  CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARG 147

Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPP 221
           +EY  SK + ++ DL A  ++  +D   +++ FGL ++      Y         + +  P
Sbjct: 148 MEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 206

Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
           E L     T +S ++SFG LL ++ +    P       +    +  L          S+ 
Sbjct: 207 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG----VPVEELFKLLKEGHRMDKPSNC 262

Query: 282 GTELVRLASRCLQYEPRERPNPRSLVTAL 310
             EL  +   C    P +RP  + LV  L
Sbjct: 263 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 291

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  104 bits (260), Expect = 4e-26
 Identities = 44/258 (17%), Positives = 94/258 (36%), Gaps = 20/258 (7%)

Query: 56  FAMEN--IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQ---FLEEARAVGQ 109
           +++++  I+   G  +   V+  +   N    A+K   +      +Q     +E   +  
Sbjct: 1   YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI 60

Query: 110 LRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALE 169
           + +  +  + G   +  +  ++ +Y+    L       ++Q     +    A  +  ALE
Sbjct: 61  VTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFYAAEVCLALE 118

Query: 170 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGR 228
           Y  SK   +Y DL    I+ D + + +++ FG  K   D   +      +  PE + T  
Sbjct: 119 YLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKP 177

Query: 229 VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--ELV 286
                  +SFG L+ ++L+G             D N     +  L  +         ++ 
Sbjct: 178 YNKSIDWWSFGILIYEMLAGYTPFY--------DSNTMKTYEKILNAELRFPPFFNEDVK 229

Query: 287 RLASRCLQYEPRERPNPR 304
            L SR +  +  +R    
Sbjct: 230 DLLSRLITRDLSQRLGNL 247

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  104 bits (259), Expect = 1e-25
 Identities = 45/240 (18%), Positives = 78/240 (32%), Gaps = 16/240 (6%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPD------ARQFLEEARAVGQLRNRRLANLLGCCCE 124
            VY  +  +     A+K  ++           A         V       +  +      
Sbjct: 19  EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT 78

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
            D+   + + M    L  HL          A     A  I   LE+  ++   +Y DL  
Sbjct: 79  PDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKP 135

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--LAFTPPEYLRTGR-VTPESVMYSFGTL 241
             I+ D+  + R+S  GL  +    + +++     +  PE L+ G      +  +S G +
Sbjct: 136 ANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM 195

Query: 242 LLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
           L  LL G      H      + +  TLT +       S E   L+      LQ +   R 
Sbjct: 196 LFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE---GLLQRDVNRRL 252

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (256), Expect = 2e-25
 Identities = 45/242 (18%), Positives = 81/242 (33%), Gaps = 22/242 (9%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVG-QLRNRRLANLLGCCCEGD 126
            V+  +  +     A+K   +       D    + E R +     +  L ++       +
Sbjct: 17  KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 76

Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
               V EY+    L  H+          +     A  I   L++  SK   +Y DL    
Sbjct: 77  NLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDN 133

Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT----PPEYLRTGRVTPESVMYSFGTLL 242
           I+ D D + +++ FG+ K +  G + +     T     PE L   +       +SFG LL
Sbjct: 134 ILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL 193

Query: 243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG--TELVRLASRCLQYEPRER 300
            ++L G+             ++ + L  S              E   L  +    EP +R
Sbjct: 194 YEMLIGQSPFH--------GQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKR 245

Query: 301 PN 302
             
Sbjct: 246 LG 247

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (254), Expect = 2e-25
 Identities = 44/253 (17%), Positives = 82/253 (32%), Gaps = 27/253 (10%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQ------FLEEARAVGQLRNRRLANLLGCCCE 124
           VV K +      + A K   +     +R+         E   + ++++  +  L      
Sbjct: 25  VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 84

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
             + +L+ E +    L       E + +           I   + Y  S + A + DL  
Sbjct: 85  KTDVILILELVAGGELFDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQIA-HFDLKP 141

Query: 185 YRIVFDDDVNPR----LSCFGLMKNSRDGRSYSTNL---AFTPPEYLRTGRVTPESVMYS 237
             I+  D   P+    +  FGL      G  +        F  PE +    +  E+ M+S
Sbjct: 142 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 201

Query: 238 FGTLLLDLLSGKHIPPSH----ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
            G +   LLSG            L  +   N +       E ++ S+          R L
Sbjct: 202 IGVITYILLSGASPFLGDTKQETLANVSAVNYE------FEDEYFSNTSALAKDFIRRLL 255

Query: 294 QYEPRERPNPRSL 306
             +P++R   +  
Sbjct: 256 VKDPKKRMTIQDS 268

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  100 bits (249), Expect = 5e-25
 Identities = 44/255 (17%), Positives = 79/255 (30%), Gaps = 25/255 (9%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDA---------RQFLEEARAVGQLRN-RRLANLLG 120
           VV +          AVK  + +                 L+E   + ++     +  L  
Sbjct: 18  VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD 77

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
                    LV + M    L  +L   E   +      ++   + E +         ++ 
Sbjct: 78  TYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKL-NIVHR 134

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST---NLAFTPPEYLRTGRV------TP 231
           DL    I+ DDD+N +L+ FG       G          ++  PE +             
Sbjct: 135 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGK 194

Query: 232 ESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291
           E  M+S G ++  LL+G   PP      +    +    +         D    +  L SR
Sbjct: 195 EVDMWSTGVIMYTLLAGS--PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 252

Query: 292 CLQYEPRERPNPRSL 306
            L  +P++R      
Sbjct: 253 FLVVQPQKRYTAEEA 267

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 97.2 bits (241), Expect = 1e-23
 Identities = 38/257 (14%), Positives = 76/257 (29%), Gaps = 23/257 (8%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCC-EGDERL 129
            +Y G  +     +A+K           Q   E++    ++       +  C  EGD  +
Sbjct: 22  DIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 79

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
           +V E +        LF++ ++       L +A  +   +EY  SK   ++ D+     + 
Sbjct: 80  MVMELLGPSLE--DLFNFCSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLM 136

Query: 190 ---DDDVNPRLSCFGLMKNSRDGRSYSTN-----------LAFTPPEYLRTGRVTPESVM 235
                     +  FGL K  RD R++                +           +    +
Sbjct: 137 GLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDL 196

Query: 236 YSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD--SCLEGQFSSDEGTELVRLASRCL 293
            S G +L+    G            R +  +      S           +E     + C 
Sbjct: 197 ESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCR 256

Query: 294 QYEPRERPNPRSLVTAL 310
                ++P+   L    
Sbjct: 257 SLRFDDKPDYSYLRQLF 273

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.7 bits (240), Expect = 1e-23
 Identities = 48/248 (19%), Positives = 90/248 (36%), Gaps = 27/248 (10%)

Query: 72  VVYKGK-LENQFRIAVKRFNRS------AWPDARQFLEEARAVGQLRN--RRLANLLGCC 122
            VY G  + +   +A+K   +         P+  +   E   + ++ +    +  LL   
Sbjct: 19  SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 78

Query: 123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL 182
              D  +L+ E              E   ++  +       + EA+ +C +    L+ D+
Sbjct: 79  ERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAVRHCHNCGV-LHRDI 136

Query: 183 NAYRIVFD-DDVNPRLSCFGLMKNSRDGRSYSTN--LAFTPPEYLRTGRVTPESV-MYSF 238
               I+ D +    +L  FG     +D      +    ++PPE++R  R    S  ++S 
Sbjct: 137 KDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196

Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298
           G LL D++ G   P  H  ++IR +             F     +E   L   CL   P 
Sbjct: 197 GILLYDMVCGDI-PFEHDEEIIRGQVF-----------FRQRVSSECQHLIRWCLALRPS 244

Query: 299 ERPNPRSL 306
           +RP    +
Sbjct: 245 DRPTFEEI 252

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.1 bits (238), Expect = 3e-23
 Identities = 47/268 (17%), Positives = 82/268 (30%), Gaps = 36/268 (13%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDA-----RQFLEEARAVGQLRNRRLANLLGCCCEG 125
            VYK +       +A+K+       +A     R  L E + + +L +  +  LL      
Sbjct: 13  TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 72

Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
               LV ++M  D     +    +  +  +      L   + LEY        + DL   
Sbjct: 73  SNISLVFDFMETDLE--VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL-HRDLKPN 129

Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT-----PPEYLRTGRVTPESVMYSFGT 240
            ++ D++   +L+ FGL K+        T+   T     P              M++ G 
Sbjct: 130 NLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGC 189

Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE----------------------GQFS 278
           +L +LL      P  +      R  +TL     E                          
Sbjct: 190 ILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIF 249

Query: 279 SDEGTELVRLASRCLQYEPRERPNPRSL 306
           S  G +L+ L      + P  R      
Sbjct: 250 SAAGDDLLDLIQGLFLFNPCARITATQA 277

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 95.3 bits (236), Expect = 5e-23
 Identities = 42/284 (14%), Positives = 83/284 (29%), Gaps = 32/284 (11%)

Query: 60  NIVSEH-------GEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR 111
           N+V  H       GE +  V+++G  L N  ++A+K   R +  DA Q  +E R    L 
Sbjct: 1   NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLA 58

Query: 112 NRR-LANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY 170
               + N+     EG   +LV + +        L     +          A  +   ++ 
Sbjct: 59  GCTGIPNVYYFGQEGLHNVLVIDLLGPSLE--DLLDLCGRKFSVKTVAMAAKQMLARVQS 116

Query: 171 CTSKERALYHDLNAYRIVFDDDVNPRLSC-----FGLMKNSRDGRSYSTN---------- 215
              K   +Y D+     +     +   +      FG++K  RD  +              
Sbjct: 117 IHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSG 175

Query: 216 -LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP--SHALDLIRDRNIQTLTDSC 272
              +           +    + + G + +  L G         A +  +   I     S 
Sbjct: 176 TARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST 235

Query: 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
              +  +    E  +             P+   L      + + 
Sbjct: 236 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 279

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 94.6 bits (234), Expect = 7e-23
 Identities = 42/281 (14%), Positives = 95/281 (33%), Gaps = 35/281 (12%)

Query: 58  MEN--IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNR 113
           ME    + + GE    VVYK +       A+K+       +      + E   + +L++ 
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60

Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS 173
            +  L          +LV E++  D     L       ++        L +   + YC  
Sbjct: 61  NIVKLYDVIHTKKRLVLVFEHLDQDLK--KLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118

Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP-----PEYLRTGR 228
           + R L+ DL    ++ + +   +++ FGL +         T+   T         + + +
Sbjct: 119 R-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK 177

Query: 229 VTPESVMYSFGTLLLDLLSGKHIPPS-----------------------HALDLIRDRNI 265
            +    ++S G +  ++++G  + P                        +  +L +    
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237

Query: 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
            T+ +      F        + L S+ L+ +P +R   +  
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.5 bits (234), Expect = 2e-22
 Identities = 50/271 (18%), Positives = 85/271 (31%), Gaps = 41/271 (15%)

Query: 72  VVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER-- 128
           VVY+ KL ++   +A+K+  +    D R    E + + +L +  +  L        E+  
Sbjct: 35  VVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD 90

Query: 129 ----LLVAEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLN 183
                LV +Y+P         +    Q +           +  +L Y  S     + D+ 
Sbjct: 91  EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIK 149

Query: 184 AYRIVFDDD-VNPRLSCFGLMKNSRDGRSYSTNLAFT----PPEYLRTGRVTPESVMYSF 238
              ++ D D    +L  FG  K    G    + +       P         T    ++S 
Sbjct: 150 PQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSA 209

Query: 239 GTLLLDLLSGKHI----PPSHALDLI-------------------RDRNIQTLTDSCLEG 275
           G +L +LL G+ I         L  I                    +     +       
Sbjct: 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 269

Query: 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
            F      E + L SR L+Y P  R  P   
Sbjct: 270 VFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.6 bits (229), Expect = 4e-22
 Identities = 51/282 (18%), Positives = 103/282 (36%), Gaps = 35/282 (12%)

Query: 58  MEN--IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRN 112
           MEN   V + GE    VVYK +       +A+K+       +      + E   + +L +
Sbjct: 1   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60

Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 172
             +  LL      ++  LV E++  D L K +       +   +       + + L +C 
Sbjct: 61  PNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119

Query: 173 SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT-----PPEYLRTG 227
           S  R L+ DL    ++ + +   +L+ FGL +         T+   T     P   L   
Sbjct: 120 SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178

Query: 228 RVTPESVMYSFGTLLLDLLSGKHI-PPSHALDLIRD--RNIQTLTDSCLEGQFSSDE--- 281
             +    ++S G +  ++++ + + P    +D +    R + T  +    G  S  +   
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238

Query: 282 -----------------GTELVRLASRCLQYEPRERPNPRSL 306
                              +   L S+ L Y+P +R + ++ 
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.6 bits (229), Expect = 9e-22
 Identities = 38/271 (14%), Positives = 91/271 (33%), Gaps = 37/271 (13%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
           +V       N+ R+A+K+ +        ++ L E + + + R+  +  +           
Sbjct: 23  MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 82

Query: 130 LVAEYMPNDTLAKHLFHW-ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIV 188
           +   Y+    +   L+   +TQ +           I   L+Y  S    L+ DL    ++
Sbjct: 83  MKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLL 141

Query: 189 FDDDVNPRLSCFGLMKNSRDGRSYST-------NLAFTPPEYLRTGRVTPESV-MYSFGT 240
            +   + ++  FGL + +     ++           +  PE +   +   +S+ ++S G 
Sbjct: 142 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 201

Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE-------------------------G 275
           +L ++LS + I P        +  +  L     E                          
Sbjct: 202 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWN 261

Query: 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
           +   +  ++ + L  + L + P +R      
Sbjct: 262 RLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.6 bits (224), Expect = 4e-21
 Identities = 45/242 (18%), Positives = 82/242 (33%), Gaps = 17/242 (7%)

Query: 72  VVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
            V   +        A+K   +    A  +    + E+R +   R+  L  L       D 
Sbjct: 20  KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDR 79

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
              V EY     L  HL        + A        I  ALEY  S+   +Y D+    +
Sbjct: 80  LCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHSR-DVVYRDIKLENL 136

Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLL 243
           + D D + +++ FGL K      +       TP    PE L           +  G ++ 
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196

Query: 244 DLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP 303
           +++ G+    +   + + +  +        E +F      E   L +  L+ +P++R   
Sbjct: 197 EMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKSLLAGLLKKDPKQRLGG 250

Query: 304 RS 305
             
Sbjct: 251 GP 252

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.2 bits (223), Expect = 6e-21
 Identities = 42/249 (16%), Positives = 77/249 (30%), Gaps = 20/249 (8%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCC----CEG 125
            V +      Q + A+K        D  +   E     +  +   +  ++          
Sbjct: 27  KVLQIFNKRTQEKFALKMLQ-----DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 81

Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
              L+V E +    L   +     Q         +   I EA++Y  S     + D+   
Sbjct: 82  KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPE 140

Query: 186 RIVFDDDVNP---RLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRVTPESVMYSFG 239
            +++         +L+ FG  K +    S +T      +  PE L   +      M+S G
Sbjct: 141 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 200

Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE--GQFSSDEGTELVRLASRCLQYEP 297
            ++  LL G     S+    I       +     E      S+   E+  L    L+ EP
Sbjct: 201 VIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEP 260

Query: 298 RERPNPRSL 306
            +R      
Sbjct: 261 TQRMTITEF 269

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.0 bits (217), Expect = 3e-20
 Identities = 37/271 (13%), Positives = 88/271 (32%), Gaps = 41/271 (15%)

Query: 72  VVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-- 126
            V          ++A+K+  R   +   A++   E R +  +R+  +  LL      +  
Sbjct: 33  AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL 92

Query: 127 ----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL 182
               +  LV  +M  D         + + +       +   + + L Y  +    ++ DL
Sbjct: 93  DDFTDFYLVMPFMGTD----LGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDL 147

Query: 183 NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF--TPPEYLRTGRVTPESVMYSFGT 240
               +  ++D   ++  FGL + +    +      +   P   L   R T    ++S G 
Sbjct: 148 KPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGC 207

Query: 241 LLLDLLSGKHI-------------------PPSHALDLIRDRNIQTLTDSCLE------G 275
           ++ ++++GK +                   PP+  +  ++    +       E       
Sbjct: 208 IMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFA 267

Query: 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
              ++     V L  + L  +  +R      
Sbjct: 268 SILTNASPLAVNLLEKMLVLDAEQRVTAGEA 298

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.9 bits (209), Expect = 2e-19
 Identities = 41/281 (14%), Positives = 85/281 (30%), Gaps = 36/281 (12%)

Query: 61  IVSEHGEKAPNVVYKGK--LENQFRIAVKRFNRSAWPD-----ARQFLEEARAVGQLRNR 113
            V+E GE A   V+K +        +A+KR       +       + +   R +    + 
Sbjct: 11  CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHP 70

Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLA----KHLFHWETQPMKWAMRLRVALHIAEALE 169
            +  L   C            +  + +      +L       +       +   +   L+
Sbjct: 71  NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 130

Query: 170 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRT 226
           +  S  R ++ DL    I+       +L+ FGL +      + ++    L +  PE L  
Sbjct: 131 FLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 189

Query: 227 GRVTPESVMYSFGTLLLDLLSGKHI---------------------PPSHALDLIRDRNI 265
                   ++S G +  ++   K +                           D+   R  
Sbjct: 190 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 249

Query: 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
                +    +F +D       L  +CL + P +R +  S 
Sbjct: 250 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.8 bits (206), Expect = 5e-19
 Identities = 40/283 (14%), Positives = 80/283 (28%), Gaps = 37/283 (13%)

Query: 58  MEN--IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRN 112
           M+    + + GE     V+K K  E    +A+KR       +      L E   + +L++
Sbjct: 1   MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60

Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 172
           + +  L        +  LV E+   D      F      +   +       + + L +C 
Sbjct: 61  KNIVRLHDVLHSDKKLTLVFEFCDQDLK--KYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118

Query: 173 SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT-----PPEYLRTG 227
           S+   L+ DL    ++ + +   +L+ FGL +         +    T     P       
Sbjct: 119 SR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177

Query: 228 RVTPESVMYSFGTLLLDLLSGKHIP------------------------PSHALDLIRDR 263
             +    M+S G +  +L +                                   L   +
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237

Query: 264 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
                  +                L    L+  P +R +    
Sbjct: 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 82.5 bits (203), Expect = 3e-18
 Identities = 45/236 (19%), Positives = 76/236 (32%), Gaps = 14/236 (5%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQ---FLEEARAVGQLRNRRLANLLGCCCEGDE 127
            V   K  E+    A+K  ++      +Q    L E R +  +    L  L     +   
Sbjct: 56  RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
             +V EY+    +  HL                A  I    EY  S    +Y DL    +
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENL 172

Query: 188 VFDDDVNPRLSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
           + D     +++ FG  K  +    +         PE + +         ++ G L+ ++ 
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA 232

Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
           +G   PP  A   I+               FSS    +L  L    LQ +  +R  
Sbjct: 233 AGY--PPFFADQPIQIYEKIVSGKVRFPSHFSS----DLKDLLRNLLQVDLTKRFG 282

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.9 bits (196), Expect = 2e-17
 Identities = 45/292 (15%), Positives = 95/292 (32%), Gaps = 49/292 (16%)

Query: 61  IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLAN 117
            +++ G+     V+K +  +   ++A+K+       +      L E + +  L++  + N
Sbjct: 14  KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 73

Query: 118 LLGCCCEGDER--------LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALE 169
           L+  C               LV ++  +D     L          +   RV   +   L 
Sbjct: 74  LIEICRTKASPYNRCKGSIYLVFDFCEHDLA--GLLSNVLVKFTLSEIKRVMQMLLNGLY 131

Query: 170 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPP 221
           Y     + L+ D+ A  ++   D   +L+ FGL +     ++   N        L + PP
Sbjct: 132 YIHRN-KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPP 190

Query: 222 EYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPS----HALDLIRD-------------- 262
           E L   R   P   ++  G ++ ++ +   I       H L LI                
Sbjct: 191 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 250

Query: 263 --------RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
                     ++       +   +       + L  + L  +P +R +    
Sbjct: 251 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 4e-16
 Identities = 46/262 (17%), Positives = 84/262 (32%), Gaps = 23/262 (8%)

Query: 58  MEN--IVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAWPD----ARQFLEEARAV 107
           +EN  ++   G  A   V+  +     +     A+K   ++              E + +
Sbjct: 23  IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 82

Query: 108 GQLRNRRLANLLGCCCEGDERLLVA-EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE 166
             +R       L    + + +L +  +Y+    L  HL   E               I  
Sbjct: 83  EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQI--YVGEIVL 140

Query: 167 ALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEY--- 223
           ALE+       +Y D+    I+ D + +  L+ FGL K      +          EY   
Sbjct: 141 ALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 199

Query: 224 --LRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279
             +R G          +S G L+ +LL+G    P         +   +      E  +  
Sbjct: 200 DIVRGGDSGHDKAVDWWSLGVLMYELLTGA--SPFTVDGEKNSQAEISRRILKSEPPYPQ 257

Query: 280 DEGTELVRLASRCLQYEPRERP 301
           +       L  R L  +P++R 
Sbjct: 258 EMSALAKDLIQRLLMKDPKKRL 279

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.8 bits (175), Expect = 1e-14
 Identities = 42/278 (15%), Positives = 84/278 (30%), Gaps = 33/278 (11%)

Query: 61  IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLAN 117
            +S  G  A   V      +   R+AVK+ +R   +   A++   E R +  +++  +  
Sbjct: 22  NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 81

Query: 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKE 175
           LL             +      L     +   + Q +       +   I   L+Y  S  
Sbjct: 82  LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 140

Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGL--MKNSRDGRSYSTNLAFTPPEYLRTGRVTPES 233
             ++ DL    +  ++D   ++  FGL    +       +T     P   L         
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV 200

Query: 234 VMYSFGTLLLDLLSGKH-------------------IPPSHALDLIRDRNIQTLTDSCLE 274
            ++S G ++ +LL+G+                     P +  L  I   + +    S  +
Sbjct: 201 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ 260

Query: 275 ------GQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
                            V L  + L  +  +R      
Sbjct: 261 MPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 69.5 bits (169), Expect = 7e-14
 Identities = 42/276 (15%), Positives = 87/276 (31%), Gaps = 50/276 (18%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERL 129
            V++   + N  ++ VK          ++   E + +  LR    +  L     +   R 
Sbjct: 50  EVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 106

Query: 130 --LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
             LV E++ N    +       Q +           I +AL+YC S    ++ D+  + +
Sbjct: 107 PALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNV 160

Query: 188 VFD-DDVNPRLSCFGLMKNSRDGRSYS----TNLAFTPPEYLRTGRVTPESVMYSFGTLL 242
           + D +    RL  +GL +    G+ Y+    +     P   +          M+S G +L
Sbjct: 161 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 220

Query: 243 LDLLSGKH--------------------------------IPPSHALDLIRDRNIQTLTD 270
             ++  K                                 I      + I  R+ +   +
Sbjct: 221 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 280

Query: 271 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
             +  +       E +    + L+Y+ + R   R  
Sbjct: 281 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 68.9 bits (167), Expect = 1e-13
 Identities = 42/299 (14%), Positives = 91/299 (30%), Gaps = 65/299 (21%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
            V+  K + N   +A+K              +E + + ++ +               +LL
Sbjct: 28  TVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 86

Query: 131 VAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKER 176
                        +  +E               + +      +++  +   L+Y   +  
Sbjct: 87  DHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG 146

Query: 177 ALYHDLNAYRIVFDDD------VNPRLSCFGLMKNSRDGRSYS-TNLAFTPPEYLRTGRV 229
            ++ D+    ++ +        +  +++  G      +  + S     +  PE L     
Sbjct: 147 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPW 206

Query: 230 TPESVMYSFGTLLLDLLSGKHI-------------------------PPSHALDLIRD-- 262
              + ++S   L+ +L++G  +                          PS+ L   +   
Sbjct: 207 GCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTR 266

Query: 263 ---------RNIQTLTDSCLEG------QFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
                    RNI  L    LE       +FS DE  E+    S  LQ +PR+R +   L
Sbjct: 267 TFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 325

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.4 bits (166), Expect = 2e-13
 Identities = 39/294 (13%), Positives = 90/294 (30%), Gaps = 54/294 (18%)

Query: 61  IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLAN 117
            +   G  A  +V           +A+K+ +R       A++   E   +  + ++ + +
Sbjct: 21  NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80

Query: 118 LLGCCC------EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC 171
           LL          E  +  LV E M  +         +           +   +   +++ 
Sbjct: 81  LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-----HERMSYLLYQMLCGIKHL 135

Query: 172 TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGR 228
            S    ++ DL    IV   D   ++  FGL + +      +       +  PE +    
Sbjct: 136 HSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194

Query: 229 VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE-------------- 274
                 ++S G ++ +++  K + P        ++ I+ L   C E              
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 254

Query: 275 ----------------------GQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
                                  + +  + ++   L S+ L  +P +R +    
Sbjct: 255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 46.3 bits (109), Expect = 1e-06
 Identities = 20/147 (13%), Positives = 35/147 (23%), Gaps = 25/147 (17%)

Query: 72  VVYKGKLENQFRIAVKRFNRSA----------WPDARQFLEEARAVGQLRNRRLANLLGC 121
            V+    E      VK                      F   A    +   R L  L G 
Sbjct: 15  AVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGL 74

Query: 122 CC----EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
                   +   ++ E +            E   ++      V   I E +     +   
Sbjct: 75  AVPKVYAWEGNAVLMELI---------DAKELYRVRVENPDEVLDMILEEVAKFYHR-GI 124

Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMK 204
           ++ DL+ Y  V   +    +  F    
Sbjct: 125 VHGDLSQY-NVLVSEEGIWIIDFPQSV 150

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	359
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.92
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.7
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.15
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.14
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.69
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	97.17
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	97.1

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-59  Score=409.97  Aligned_cols=252  Identities=21%  Similarity=0.323  Sum_probs=207.0

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .++|++++.||+|+||+||+|.+.++..||||++.... ...+++.+|++++++++|||||++++++...+..++||||+
T Consensus         4 p~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~   82 (263)
T d1sm2a_           4 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   82 (263)
T ss_dssp             CSCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             hHHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEec
Confidence            35788999999999999999998888899999998654 34567999999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----  210 (359)
                      ++|+|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++......     
T Consensus        83 ~~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~-~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~  160 (263)
T d1sm2a_          83 EHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  160 (263)
T ss_dssp             TTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCTTCSGGGEEECGGGCEEECSCC--------------
T ss_pred             CCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHhhhcc-ceeecccchhheeecCCCCeEecccchheeccCCCceeec
Confidence            99999999864 456789999999999999999999999 99999999999999999999999999998654332     


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCc-chhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS-HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ...||+.|+|||++.+..++.++|||||||++|||+|+..|+.. .........     +........+...++++.+|+
T Consensus       161 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~-----i~~~~~~~~p~~~~~~l~~li  235 (263)
T d1sm2a_         161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-----ISTGFRLYKPRLASTHVYQIM  235 (263)
T ss_dssp             ----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHH-----HHHTCCCCCCTTSCHHHHHHH
T ss_pred             ceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHH-----HHhcCCCCCccccCHHHHHHH
Confidence            34578999999999999999999999999999999996555443 322222211     111222334556678899999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          290 SRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      .+||+.||++|||++++++.|+++.+
T Consensus       236 ~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         236 NHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            99999999999999999999999865

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.7e-59  Score=413.68  Aligned_cols=246  Identities=17%  Similarity=0.239  Sum_probs=211.3

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      ..|.++++||+|+||+||+|.. .+|+.||||++........+.+.+|+++|+.++|||||++++++.+.+..||||||+
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            3689999999999999999994 578999999998766556778999999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----CC
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~~  211 (359)
                      ++|+|.+++.+   ..+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++.....    ..
T Consensus       100 ~gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~-~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~  175 (293)
T d1yhwa1         100 AGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST  175 (293)
T ss_dssp             TTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred             CCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCcHHHeEECCCCcEeeccchhheeeccccccccc
Confidence            99999998853   4699999999999999999999999 9999999999999999999999999999876433    34


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ..||+.|+|||++.+..++.++|||||||++|+|+||+.||..............   ........+...++++.+|+.+
T Consensus       176 ~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~li~~  252 (293)
T d1yhwa1         176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT---NGTPELQNPEKLSAIFRDFLNR  252 (293)
T ss_dssp             CCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---HCSCCCSSGGGSCHHHHHHHHH
T ss_pred             cccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHh---CCCCCCCCcccCCHHHHHHHHH
Confidence            5689999999999999999999999999999999999999876543222211111   1111122345677899999999


Q ss_pred             hcccCCCCCCCHHHHHHH
Q 018244          292 CLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rps~~~il~~  309 (359)
                      ||+.||++|||+.|++++
T Consensus       253 ~L~~dP~~R~s~~eil~H  270 (293)
T d1yhwa1         253 CLDMDVEKRGSAKELLQH  270 (293)
T ss_dssp             HTCSSTTTSCCHHHHTTC
T ss_pred             HccCChhHCcCHHHHhcC
Confidence            999999999999999864

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.8e-59  Score=414.80  Aligned_cols=254  Identities=21%  Similarity=0.331  Sum_probs=217.5

Q ss_pred             CCcccccccCCCCCCcEEEEEEeC-CCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .++|++.+.||+|+||+||+|.+. ++..||||+++... ...+++.+|+++|+.++|||||+++++|.+++..+|||||
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~   94 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   94 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeec
Confidence            357788899999999999999964 58899999997654 3467899999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC----
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~----  210 (359)
                      +++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++......    
T Consensus        95 ~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~-~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~  173 (287)
T d1opja_          95 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  173 (287)
T ss_dssp             CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEE
T ss_pred             ccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC-CcccCccccCeEEECCCCcEEEccccceeecCCCCceee
Confidence            9999999999876677899999999999999999999999 99999999999999999999999999998765443    


Q ss_pred             -CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcc-hhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       211 -~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                       ...||+.|+|||++.+..++.++|||||||++|||++|..|+... ......     ..+........+...++++.+|
T Consensus       174 ~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~l~~l  248 (287)
T d1opja_         174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-----ELLEKDYRMERPEGCPEKVYEL  248 (287)
T ss_dssp             TTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-----HHHHTTCCCCCCTTCCHHHHHH
T ss_pred             ccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHH-----HHHhcCCCCCCCccchHHHHHH
Confidence             224678899999999999999999999999999999987766433 222221     1222223344556678899999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          289 ASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      +.+||+.||++|||+.++++.|+.+.++
T Consensus       249 i~~cl~~dP~~Rps~~ei~~~L~~~~~~  276 (287)
T d1opja_         249 MRACWQWNPSDRPSFAEIHQAFETMFQE  276 (287)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred             HHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence            9999999999999999999999987654

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-59  Score=409.12  Aligned_cols=244  Identities=21%  Similarity=0.291  Sum_probs=211.2

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ++|++++.||+|+||+||+|+. .+++.||+|++....   ....+.+.+|+++|+.++|||||++++++.+++..+|||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            5788999999999999999996 468899999987432   223567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--C
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--R  210 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--~  210 (359)
                      ||+++|+|.+++.  ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....  .
T Consensus        86 Ey~~~g~L~~~l~--~~~~l~e~~~~~i~~qi~~al~~lH~~-~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~  162 (263)
T d2j4za1          86 EYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT  162 (263)
T ss_dssp             ECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCE
T ss_pred             eecCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeeeeccccceecCCCCEeecccceeeecCCCccc
Confidence            9999999999997  345699999999999999999999999 9999999999999999999999999999876544  3


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ...||+.|+|||++.+..++.++|||||||++|+|++|+.||..............      ....++...++++.+|+.
T Consensus       163 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~------~~~~~p~~~s~~~~~li~  236 (263)
T d2j4za1         163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------VEFTFPDFVTEGARDLIS  236 (263)
T ss_dssp             ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT------TCCCCCTTSCHHHHHHHH
T ss_pred             ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHc------CCCCCCccCCHHHHHHHH
Confidence            45789999999999999999999999999999999999999977654433322211      112345567789999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~  309 (359)
                      +||+.||++|||++|++++
T Consensus       237 ~~L~~dp~~R~t~~eil~h  255 (263)
T d2j4za1         237 RLLKHNPSQRPMLREVLEH  255 (263)
T ss_dssp             HHTCSSGGGSCCHHHHHTC
T ss_pred             HHccCCHhHCcCHHHHHcC
Confidence            9999999999999999863

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-58  Score=408.64  Aligned_cols=255  Identities=20%  Similarity=0.289  Sum_probs=206.6

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCC--CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      +.+|.+.+.||+|+||+||+|+++.  .||||+++...  ....+.+.+|+++|++++|||||++++++.. +..+||||
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~E   83 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ   83 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence            4567888899999999999998653  59999997543  3346779999999999999999999998754 56899999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |+++|+|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....    
T Consensus        84 y~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~-~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~  161 (276)
T d1uwha_          84 WCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH  161 (276)
T ss_dssp             CCCEEEHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTSSEEECCCCCSCC--------
T ss_pred             cCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHhcC-CEeccccCHHHEEEcCCCCEEEccccceeeccccCCcc
Confidence            9999999999964 445799999999999999999999999 9999999999999999999999999999865432    


Q ss_pred             --CCcCCCccccCcccccC---CCCCCccchhhHHHHHHHHHhCCCCCCcchhHH-HhhhhhhhhccccccCCCChHHHH
Q 018244          210 --RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       210 --~~~~~t~~y~aPE~~~~---~~~~~~~Di~slG~il~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                        ....||+.|+|||++.+   ..|+.++|||||||++|||+||+.||....... ...........+. ....+..+++
T Consensus       162 ~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~  240 (276)
T d1uwha_         162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD-LSKVRSNCPK  240 (276)
T ss_dssp             ----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCC-GGGSCTTCCH
T ss_pred             cccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCc-chhccccchH
Confidence              24568999999999864   358999999999999999999999987543221 1111111111111 1123455678


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      ++.+|+.+||+.||++|||+.++++.|+.+.+.
T Consensus       241 ~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~  273 (276)
T d1uwha_         241 AMKRLMAECLKKKRDERPLFPQILASIELLARS  273 (276)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence            899999999999999999999999999988753

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.6e-58  Score=414.34  Aligned_cols=266  Identities=20%  Similarity=0.288  Sum_probs=210.4

Q ss_pred             cCHHHHHHHhcCC------CcccccccCCCCCCcEEEEEEeC-CC---cEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCC
Q 018244           44 YSIETLRTATSGF------AMENIVSEHGEKAPNVVYKGKLE-NQ---FRIAVKRFNRSAWP-DARQFLEEARAVGQLRN  112 (359)
Q Consensus        44 ~~~~~~~~~~~~~------~~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h  112 (359)
                      ++++++..++++|      +.|++.+.||+|+||+||+|... ++   ..||||.+...... ..+.+.+|+++|++++|
T Consensus         7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H   86 (299)
T d1jpaa_           7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH   86 (299)
T ss_dssp             GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC
Confidence            3444444444433      56778888999999999999864 22   36899998765433 35679999999999999


Q ss_pred             cccccccceeeeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC
Q 018244          113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD  192 (359)
Q Consensus       113 ~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~  192 (359)
                      ||||++++++...+..++||||+++|+|.+++.. ....+++..+..++.||+.||.|||++ +|+||||||+|||++.+
T Consensus        87 pnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHrDlKp~NILl~~~  164 (299)
T d1jpaa_          87 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADM-NYVHRDLAARNILVNSN  164 (299)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTT
T ss_pred             CCCccEEEEEeeCCEEEEEEEecCCCcceeeecc-ccCCCCHHHHHHHHHHHHHHHHHHhhC-CCccCccccceEEECCC
Confidence            9999999999999999999999999999998864 455799999999999999999999999 99999999999999999


Q ss_pred             CCeEEeccCCcccCCCCC---------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhh
Q 018244          193 VNPRLSCFGLMKNSRDGR---------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRD  262 (359)
Q Consensus       193 ~~~kl~DFg~a~~~~~~~---------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~  262 (359)
                      +.+||+|||+++......         ...+|+.|+|||.+.++.++.++|||||||++|||+| |+.||..........
T Consensus       165 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~  244 (299)
T d1jpaa_         165 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN  244 (299)
T ss_dssp             CCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred             CcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            999999999998754332         1346789999999999999999999999999999998 788877654433322


Q ss_pred             hhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          263 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      ...     ...+...+..++.++.+|+.+||+.||++|||+.++++.|+++.+.
T Consensus       245 ~i~-----~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~  293 (299)
T d1jpaa_         245 AIE-----QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN  293 (299)
T ss_dssp             HHH-----TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHH-----cCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence            221     1222334566778899999999999999999999999999988664

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-58  Score=408.90  Aligned_cols=252  Identities=23%  Similarity=0.334  Sum_probs=212.2

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      +.+|++++.||+|+||+||+|.++++..||||++.... ...+.+.+|+++|++++|||||++++++.+ +..+|||||+
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~   89 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM   89 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred             HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeC
Confidence            35788899999999999999999888899999998654 345679999999999999999999998754 5689999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-----C
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-----~  210 (359)
                      ++|+|.+++.......+++..+..|+.||+.||.|||++ +|+||||||+|||+++++.+||+|||+|+.....     .
T Consensus        90 ~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~-~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~  168 (272)
T d1qpca_          90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE  168 (272)
T ss_dssp             TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred             CCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCccchhheeeecccceeeccccceEEccCCcccccc
Confidence            999999988654445699999999999999999999999 9999999999999999999999999999876543     2


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcch-hHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ...||+.|+|||++.++.++.++|||||||++|||+||..|+.... .......     +....+...+...++++.+|+
T Consensus       169 ~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~-----i~~~~~~~~p~~~~~~l~~li  243 (272)
T d1qpca_         169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN-----LERGYRMVRPDNCPEELYQLM  243 (272)
T ss_dssp             TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH-----HHTTCCCCCCTTCCHHHHHHH
T ss_pred             ccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHH-----HHhcCCCCCcccChHHHHHHH
Confidence            3467889999999998899999999999999999999766654432 2211111     111223334566778899999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          290 SRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      .+||+.||++|||++++++.|+.+..
T Consensus       244 ~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         244 RLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            99999999999999999999987654

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-58  Score=407.90  Aligned_cols=246  Identities=17%  Similarity=0.138  Sum_probs=203.2

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .+|++++.||+|+||+||+|+. .+|+.||||++...... ..+.+.+|+++|+.++|||||++++++.+++..||||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            4689999999999999999995 56899999999765432 345689999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-----
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----  209 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-----  209 (359)
                      +++|+|.+++.  ....+++..+..++.||+.||+|||++ ||+||||||+|||+++++.+||+|||+|+.....     
T Consensus        85 ~~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~-~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~  161 (271)
T d1nvra_          85 CSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL  161 (271)
T ss_dssp             CTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred             cCCCcHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHc-CCccCcccHHHEEECCCCCEEEccchhheeeccCCcccc
Confidence            99999999996  456799999999999999999999999 9999999999999999999999999999865322     


Q ss_pred             -CCcCCCccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          210 -RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       210 -~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                       ....||+.|+|||++.+..+ +.++|||||||++|+|+||+.||............   ..............++++.+
T Consensus       162 ~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~s~~~~~  238 (271)
T d1nvra_         162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD---WKEKKTYLNPWKKIDSAPLA  238 (271)
T ss_dssp             BCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHH---HHTTCTTSTTGGGSCHHHHH
T ss_pred             ccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHH---HhcCCCCCCccccCCHHHHH
Confidence             34578999999999988776 57899999999999999999998654321111111   11111111122456788999


Q ss_pred             HHHHhcccCCCCCCCHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~  308 (359)
                      |+.+||+.||++|||++++++
T Consensus       239 li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         239 LLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHcCCChhHCcCHHHHhc
Confidence            999999999999999999875

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-58  Score=409.86  Aligned_cols=247  Identities=16%  Similarity=0.203  Sum_probs=209.6

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCC
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      .|++++.||+|+||+||+|.. .++..||||++........+.+.+|+++|+.++|||||++++++.+.+..+|||||++
T Consensus        13 ~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~   92 (288)
T d2jfla1          13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA   92 (288)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             CeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCC
Confidence            578999999999999999995 5688999999987766667789999999999999999999999999999999999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC----CCCc
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSY  212 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~----~~~~  212 (359)
                      +|+|.+++.+ ....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+|+....    ....
T Consensus        93 ~g~L~~~~~~-~~~~l~e~~~~~i~~qi~~gL~ylH~~-~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~  170 (288)
T d2jfla1          93 GGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDN-KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF  170 (288)
T ss_dssp             TEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCC
T ss_pred             CCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CEEEeecChhheeECCCCCEEEEechhhhccCCCccccccc
Confidence            9999998764 345799999999999999999999999 999999999999999999999999999976543    2356


Q ss_pred             CCCccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          213 STNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       213 ~~t~~y~aPE~~~-----~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                      .||+.|+|||++.     +..|+.++|||||||++|+|+||+.||...............   .......+...++++.+
T Consensus       171 ~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~---~~~~~~~~~~~s~~~~~  247 (288)
T d2jfla1         171 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS---EPPTLAQPSRWSSNFKD  247 (288)
T ss_dssp             CSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHS---CCCCCSSGGGSCHHHHH
T ss_pred             ccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC---CCCCCCccccCCHHHHH
Confidence            7899999999984     345899999999999999999999998765333222211111   11111234567789999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHH
Q 018244          288 LASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~~il~~  309 (359)
                      |+.+||+.||++|||+.|++++
T Consensus       248 li~~~L~~dp~~R~t~~ell~h  269 (288)
T d2jfla1         248 FLKKCLEKNVDARWTTSQLLQH  269 (288)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTTS
T ss_pred             HHHHHccCChhHCcCHHHHhcC
Confidence            9999999999999999998763

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-57  Score=396.28  Aligned_cols=249  Identities=23%  Similarity=0.349  Sum_probs=214.5

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .++|++++.||+|+||+||+|+.+++..||||.++.... ..+++.+|+.++++++||||+++++++.+.+.+++||||+
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~   81 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM   81 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC
T ss_pred             hHHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEcc
Confidence            356788999999999999999998888999999987654 3567999999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----  210 (359)
                      .+|+|..++.. ....+++..+.+++.|+++||.|||++ +|+||||||+||++++++.+||+|||+++......     
T Consensus        82 ~~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~-~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~  159 (258)
T d1k2pa_          82 ANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV  159 (258)
T ss_dssp             TTEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHT-TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCC
T ss_pred             CCCcHHHhhhc-cccCCcHHHHHHHHHHHHHHHHHHhhc-CcccccccceeEEEcCCCcEEECcchhheeccCCCceeec
Confidence            99999998764 455789999999999999999999999 99999999999999999999999999998654332     


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ...+|+.|+|||.+.+..++.++||||||+++|||+| |+.||.............     ...+...+...++++.+|+
T Consensus       160 ~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~-----~~~~~~~p~~~~~~l~~li  234 (258)
T d1k2pa_         160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-----QGLRLYRPHLASEKVYTIM  234 (258)
T ss_dssp             CSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHH-----TTCCCCCCTTCCHHHHHHH
T ss_pred             ccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHH-----hCCCCCCcccccHHHHHHH
Confidence            3457889999999999999999999999999999998 787777655443332222     1223344566778999999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHH
Q 018244          290 SRCLQYEPRERPNPRSLVTALVT  312 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~L~~  312 (359)
                      .+||+.||++|||+++++++|..
T Consensus       235 ~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         235 YSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHccCCHhHCcCHHHHHHHhhC
Confidence            99999999999999999999864

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-58  Score=404.64  Aligned_cols=248  Identities=17%  Similarity=0.220  Sum_probs=199.6

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeee--CCcceE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLL  130 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~l  130 (359)
                      .++|++++.||+|+||+||+|+. .+|+.||||.+......  ..+.+.+|+++|+.++|||||++++++.+  .+.+||
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i   82 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   82 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence            35789999999999999999985 56899999999876433  24568899999999999999999999865  456899


Q ss_pred             EEecCCCCCHhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHhhcCC----CcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          131 VAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKE----RALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~----~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                      ||||+++|+|.+++...  ....+++..++.++.||+.||.|||+..    +|+||||||+|||++.++.+||+|||+++
T Consensus        83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~  162 (269)
T d2java1          83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  162 (269)
T ss_dssp             EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred             EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence            99999999999998642  3567999999999999999999999861    39999999999999999999999999998


Q ss_pred             cCCCC----CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChH
Q 018244          205 NSRDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD  280 (359)
Q Consensus       205 ~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (359)
                      .....    ....||+.|+|||++.+..++.++|||||||++|||+||+.||...............     .....+..
T Consensus       163 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~-----~~~~~~~~  237 (269)
T d2java1         163 ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-----KFRRIPYR  237 (269)
T ss_dssp             HC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT-----CCCCCCTT
T ss_pred             ecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcC-----CCCCCCcc
Confidence            76543    3457899999999999999999999999999999999999999776544333222111     11234456


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          281 EGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       281 ~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                      .++++.+|+.+||+.||++|||+.|+++
T Consensus       238 ~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         238 YSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            7788999999999999999999999986

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.1e-57  Score=407.14  Aligned_cols=245  Identities=19%  Similarity=0.209  Sum_probs=209.0

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCch---HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      .|..+++||+|+||+||+|.. .++..||||++.......   .+.+.+|+++|+.++|||||++++++.+++..+||||
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            378899999999999999984 578899999997654332   3568899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCCCcC
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS  213 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~~~~  213 (359)
                      ||.+|+|..++.  ....+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++.........
T Consensus        96 ~~~~g~l~~~~~--~~~~l~e~~~~~i~~qi~~aL~yLH~~-~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~  172 (309)
T d1u5ra_          96 YCLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFV  172 (309)
T ss_dssp             CCSEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCC
T ss_pred             ecCCCchHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeccCCCcceEEECCCCCEEEeecccccccCCCCccc
Confidence            999998877665  446799999999999999999999999 99999999999999999999999999999888888889


Q ss_pred             CCccccCcccccC---CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          214 TNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       214 ~t~~y~aPE~~~~---~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ||+.|+|||++.+   +.|+.++|||||||++|||++|..||..............    .......+...++++.+|+.
T Consensus       173 GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~----~~~~~~~~~~~s~~~~~li~  248 (309)
T d1u5ra_         173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ----NESPALQSGHWSEYFRNFVD  248 (309)
T ss_dssp             SCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH----SCCCCCSCTTSCHHHHHHHH
T ss_pred             cCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh----CCCCCCCCCCCCHHHHHHHH
Confidence            9999999999864   4589999999999999999999999876543322221111    11111223456788999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~  309 (359)
                      +||+.||++|||+.+++++
T Consensus       249 ~~L~~dP~~Rpt~~ell~H  267 (309)
T d1u5ra_         249 SCLQKIPQDRPTSEVLLKH  267 (309)
T ss_dssp             HHTCSSGGGSCCHHHHTTC
T ss_pred             HHCcCChhHCcCHHHHHhC
Confidence            9999999999999999874

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-57  Score=405.20  Aligned_cols=244  Identities=17%  Similarity=0.173  Sum_probs=209.6

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ++|++++.||+|+||+||+|.. .+++.||||++....   ....+.+.+|+++|++++||||+++++++.+.+..||||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            5789999999999999999995 578999999997432   223567899999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC---
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~---  209 (359)
                      ||+++|+|.+++.  ..+.+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+|+.....   
T Consensus        88 Ey~~gg~L~~~~~--~~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~  164 (288)
T d1uu3a_          88 SYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ  164 (288)
T ss_dssp             CCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             EccCCCCHHHhhh--ccCCCCHHHHHHHHHHHHHHHHhhccc-cEEcCcCCccccccCCCceEEecccccceecccCCcc
Confidence            9999999999886  446799999999999999999999999 9999999999999999999999999999876432   


Q ss_pred             ---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHH
Q 018244          210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV  286 (359)
Q Consensus       210 ---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  286 (359)
                         ....||+.|+|||++.+..++.++|||||||++|+|++|..||...............      ...++...++++.
T Consensus       165 ~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~  238 (288)
T d1uu3a_         165 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL------EYDFPEKFFPKAR  238 (288)
T ss_dssp             -----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT------CCCCCTTCCHHHH
T ss_pred             cccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC------CCCCCccCCHHHH
Confidence               2456899999999999999999999999999999999999999876444333222211      1234556778999


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHH
Q 018244          287 RLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       287 ~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +||.+||+.||++|||++|+++.
T Consensus       239 ~li~~~L~~dP~~R~t~~e~~~~  261 (288)
T d1uu3a_         239 DLVEKLLVLDATKRLGCEEMEGY  261 (288)
T ss_dssp             HHHHTTSCSSGGGSTTSGGGTCH
T ss_pred             HHHHHHccCCHhHCcCHHHHcCC
Confidence            99999999999999999998654

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.3e-57  Score=404.99  Aligned_cols=247  Identities=15%  Similarity=0.173  Sum_probs=195.8

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .|++++.||+|+||+||+|.. .+++.||||++...... ....+.+|+.+|+.++|||||++++++.+++.+||||||+
T Consensus        10 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~   89 (307)
T d1a06a_          10 IYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV   89 (307)
T ss_dssp             TEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence            488999999999999999995 46889999999765432 2346789999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC---CCCCeEEeccCCcccCCCC---
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~---~~~~~kl~DFg~a~~~~~~---  209 (359)
                      ++|+|.+++.  ....+++..+..++.||+.||+|||++ +|+||||||+|||+.   +++.+||+|||+++.....   
T Consensus        90 ~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~  166 (307)
T d1a06a_          90 SGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDL-GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL  166 (307)
T ss_dssp             CSCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSTTCCEEECCC------------
T ss_pred             CCCcHHHhhh--cccCCCHHHHHHHHHHHHHHHHhhhhc-eeeeEEecccceeecccCCCceEEEeccceeEEccCCCee
Confidence            9999999997  456799999999999999999999999 999999999999995   5789999999999876544   


Q ss_pred             CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ....||+.|+|||++.+..|+.++|||||||++|+|++|..||.................  ..........++++.+|+
T Consensus       167 ~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li  244 (307)
T d1a06a_         167 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEY--EFDSPYWDDISDSAKDFI  244 (307)
T ss_dssp             ------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCC--CCCTTTTTTSCHHHHHHH
T ss_pred             eeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCC--CCCCccccCCCHHHHHHH
Confidence            345689999999999999999999999999999999999999987654443332222111  111223356778999999


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 018244          290 SRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+||+.||++|||+.|++++
T Consensus       245 ~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         245 RHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             HHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHccCCHhHCcCHHHHhcC
Confidence            99999999999999999874

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-57  Score=410.15  Aligned_cols=254  Identities=17%  Similarity=0.213  Sum_probs=206.3

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ++|++++.||+|+||+||+|.. .+|..||+|+++.... ...+.+.+|+.+|+.++|||||+++++|.+.+.++|||||
T Consensus         6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy   85 (322)
T d1s9ja_           6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   85 (322)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            4688999999999999999995 5789999999976533 3356789999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC--CCCc
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY  212 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~--~~~~  212 (359)
                      +++|+|.+++.+  ...+++..+..++.|++.||.|||++.+|+||||||+|||++.++.+||+|||+|+....  ....
T Consensus        86 ~~gg~L~~~l~~--~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~  163 (322)
T d1s9ja_          86 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF  163 (322)
T ss_dssp             CTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---
T ss_pred             CCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCccccc
Confidence            999999999973  456999999999999999999999732899999999999999999999999999986532  3456


Q ss_pred             CCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh--------------------------
Q 018244          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ--------------------------  266 (359)
Q Consensus       213 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~--------------------------  266 (359)
                      .||+.|+|||++.+..|+.++||||+||++|||++|+.||..............                          
T Consensus       164 ~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (322)
T d1s9ja_         164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMD  243 (322)
T ss_dssp             CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC----------------------------
T ss_pred             cCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccc
Confidence            899999999999999999999999999999999999999865432211100000                          


Q ss_pred             ------------hhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHH
Q 018244          267 ------------TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVT  312 (359)
Q Consensus       267 ------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~--L~~  312 (359)
                                  ...............+.++.+|+.+||..||++|||++|++++  +++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~  303 (322)
T d1s9ja_         244 SRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  303 (322)
T ss_dssp             --CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             cccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCc
Confidence                        0000000000112246789999999999999999999999985  544

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-56  Score=395.45  Aligned_cols=243  Identities=19%  Similarity=0.245  Sum_probs=198.8

Q ss_pred             ccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeee----CCcceEE
Q 018244           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLV  131 (359)
Q Consensus        59 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv  131 (359)
                      |++.++||+|+||+||+|.. .++..||+|.+.....  ...+.+.+|+++|+.++|||||++++++.+    ...++||
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv   90 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV   90 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence            45666799999999999995 4688999999875432  335578999999999999999999999865    3458999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccCCCCCeeeC-CCCCeEEeccCCcccCCC
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~--ivH~Dikp~NIll~-~~~~~kl~DFg~a~~~~~  208 (359)
                      |||+++|+|.+++.  +...+++..+..++.||+.||+|||++ +  |+||||||+|||++ +++.+||+|||+++....
T Consensus        91 mE~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~  167 (270)
T d1t4ha_          91 TELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  167 (270)
T ss_dssp             EECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             EeCCCCCcHHHHHh--ccccccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence            99999999999997  345799999999999999999999998 7  99999999999996 578999999999987554


Q ss_pred             C--CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhH-HHhhhhhhhhccccccCCCChHHHHHH
Q 018244          209 G--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       209 ~--~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                      .  ....||+.|+|||++.+ .++.++|||||||++|||++|+.||...... ...........    ...++...++++
T Consensus       168 ~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~  242 (270)
T d1t4ha_         168 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK----PASFDKVAIPEV  242 (270)
T ss_dssp             TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC----CGGGGGCCCHHH
T ss_pred             CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCC----CcccCccCCHHH
Confidence            3  34579999999999874 6999999999999999999999998654222 12111111111    111233456789


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHH
Q 018244          286 VRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+|+.+||+.||++|||+.|++++
T Consensus       243 ~~li~~~l~~dp~~R~s~~ell~H  266 (270)
T d1t4ha_         243 KEIIEGCIRQNKDERYSIKDLLNH  266 (270)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHccCCHhHCcCHHHHhCC
Confidence            999999999999999999999863

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-56  Score=396.02  Aligned_cols=255  Identities=21%  Similarity=0.289  Sum_probs=206.5

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCC-----cEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQ-----FRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      +.|.+.+.||+|+||+||+|.+...     ..||||++...... ....+.+|+++|+.++|||||+++|++.+.+..++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            3466677789999999999985432     46999999765433 34568999999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      ||||+.+|++.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+||||+.++.+||+|||+++......
T Consensus        87 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~-~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~  164 (283)
T d1mqba_          87 ITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP  164 (283)
T ss_dssp             EEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred             EEEecccCcchhhhhc-ccccccHHHHHHHHHHHHHhhhhcccc-ccccCccccceEEECCCCeEEEcccchhhcccCCC
Confidence            9999999999998765 456799999999999999999999999 99999999999999999999999999998754321


Q ss_pred             -------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          211 -------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       211 -------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                             ...||+.|+|||++.++.++.++|||||||++|||+++..|+........    ....+....+...+...+.
T Consensus       165 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~  240 (283)
T d1mqba_         165 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE----VMKAINDGFRLPTPMDCPS  240 (283)
T ss_dssp             ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH----HHHHHHTTCCCCCCTTCBH
T ss_pred             ccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHH----HHHHHhccCCCCCchhhHH
Confidence                   23578899999999999999999999999999999997766654322211    1112222233445566778


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT  317 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~  317 (359)
                      ++.+|+.+||+.||++|||+.+|++.|+.+.+..
T Consensus       241 ~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~p  274 (283)
T d1mqba_         241 AIYQLMMQCWQQERARRPKFADIVSILDKLIRAP  274 (283)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhCc
Confidence            9999999999999999999999999999887643

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=1.3e-56  Score=409.92  Aligned_cols=250  Identities=19%  Similarity=0.158  Sum_probs=213.9

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ++.|++++.||+|+||+||+|.. .+|..||||++........+.+.+|+++|+.++|||||++++++.+++.+||||||
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            45799999999999999999995 57999999999876655566788999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC--CCCCeEEeccCCcccCCCCC--
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDVNPRLSCFGLMKNSRDGR--  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~--~~~~~kl~DFg~a~~~~~~~--  210 (359)
                      |++|+|.+++.. ....+++..++.|+.||+.||.|||++ ||+||||||+|||++  .++.+||+|||+|+......  
T Consensus       108 ~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~-~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~  185 (352)
T d1koba_         108 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV  185 (352)
T ss_dssp             CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred             CCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccccccccccccCCCeEEEeecccceecCCCCce
Confidence            999999998753 445799999999999999999999999 999999999999998  67899999999999876553  


Q ss_pred             -CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       211 -~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                       ...||+.|+|||++.+..++.++|||||||++|+|+||+.||.................  ..........++++.+||
T Consensus       186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li  263 (352)
T d1koba_         186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDW--EFDEDAFSSVSPEAKDFI  263 (352)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCC--CCCSSTTTTSCHHHHHHH
T ss_pred             eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCcccccCCCHHHHHHH
Confidence             35789999999999999999999999999999999999999987544333222221111  111223345778899999


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 018244          290 SRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~  309 (359)
                      .+||+.||++|||+.|++++
T Consensus       264 ~~~L~~dp~~R~s~~eil~H  283 (352)
T d1koba_         264 KNLLQKEPRKRLTVHDALEH  283 (352)
T ss_dssp             HTTSCSSGGGSCCHHHHHTS
T ss_pred             HHHccCChhHCcCHHHHhcC
Confidence            99999999999999999875

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.1e-56  Score=408.30  Aligned_cols=249  Identities=19%  Similarity=0.153  Sum_probs=212.2

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .+|++++.||+|+||+||+|.. .+|..||||++........+.+.+|+++|+.++|||||++++++.+.+.++|||||+
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  105 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  105 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            4688999999999999999995 578999999998776666677899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC--CCCCeEEeccCCcccCCCCC---
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDVNPRLSCFGLMKNSRDGR---  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~--~~~~~kl~DFg~a~~~~~~~---  210 (359)
                      ++|+|.+++.+ ....+++..+..|+.||+.||.|||++ ||+||||||+|||++  .++.+||+|||+++......   
T Consensus       106 ~gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~-~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~  183 (350)
T d1koaa2         106 SGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK  183 (350)
T ss_dssp             CSCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEE
T ss_pred             CCCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhc-CCeeeeechhHeeeccCCCCeEEEeecchheecccccccc
Confidence            99999999854 445799999999999999999999999 999999999999996  46889999999998766543   


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ...||+.|+|||++.+..++.++|||||||++|+|++|+.||..................  .........++++.+||.
T Consensus       184 ~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~li~  261 (350)
T d1koaa2         184 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN--MDDSAFSGISEDGKDFIR  261 (350)
T ss_dssp             EECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--SCCGGGGGCCHHHHHHHH
T ss_pred             eecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCcccccCCCHHHHHHHH
Confidence            457899999999999999999999999999999999999999765443332222211110  111122346788999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 018244          291 RCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~  309 (359)
                      +||+.||++|||+.|++++
T Consensus       262 ~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         262 KLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             HHCCSSGGGSCCHHHHHHS
T ss_pred             HHccCChhHCcCHHHHhcC
Confidence            9999999999999999985

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-56  Score=397.95  Aligned_cols=254  Identities=23%  Similarity=0.339  Sum_probs=210.3

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecC
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      +.+|++.+.||+|+||+||+|+++++..||||++.... ...+.+.+|+.+|++++|||||++++++.+ +..++||||+
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~   93 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM   93 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEec
Confidence            35788999999999999999998888889999997654 345779999999999999999999999854 5689999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-----
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----  210 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-----  210 (359)
                      ++|+|..++.......+++.++..++.||+.||+|||++ +|+||||||+||||++++.+||+|||+++......     
T Consensus        94 ~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~-~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  172 (285)
T d1fmka3          94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ  172 (285)
T ss_dssp             TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred             CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh-heecccccceEEEECCCCcEEEcccchhhhccCCCceeec
Confidence            999999998754556799999999999999999999999 99999999999999999999999999998654332     


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHH-HhhhhhhhhccccccCCCChHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQFSSDEGTELVRLA  289 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  289 (359)
                      ...+|+.|+|||++.++.++.++||||||+++|||+||..|+....... .....     ........+..+++++.+|+
T Consensus       173 ~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i-----~~~~~~~~~~~~~~~l~~li  247 (285)
T d1fmka3         173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-----ERGYRMPCPPECPESLHDLM  247 (285)
T ss_dssp             ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-----HTTCCCCCCTTSCHHHHHHH
T ss_pred             cccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHH-----HhcCCCCCCcccCHHHHHHH
Confidence            3457899999999999999999999999999999999776665433221 21111     11222334566778999999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 018244          290 SRCLQYEPRERPNPRSLVTALVTLQKDT  317 (359)
Q Consensus       290 ~~cl~~dp~~Rps~~~il~~L~~~~~~~  317 (359)
                      .+||+.||++|||+++|++.|+......
T Consensus       248 ~~cl~~dP~~Rps~~~i~~~L~~~~~~~  275 (285)
T d1fmka3         248 CQCWRKEPEERPTFEYLQAFLEDYFTST  275 (285)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             HHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence            9999999999999999999998865543

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-56  Score=395.13  Aligned_cols=249  Identities=20%  Similarity=0.267  Sum_probs=207.6

Q ss_pred             ccccc-cCCCCCCcEEEEEEeC---CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           59 ENIVS-EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        59 ~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      +.+.. +||+|+||+||+|.+.   ++..||||+++..... ..+.+.+|+++|++++|||||++++++.. +..+||||
T Consensus        10 ~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE   88 (285)
T d1u59a_          10 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVME   88 (285)
T ss_dssp             EEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEE
T ss_pred             eEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEE
Confidence            34444 4899999999999753   3557999999865433 35679999999999999999999999864 56899999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC---
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~---  210 (359)
                      |+++|+|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......   
T Consensus        89 ~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~-~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~  166 (285)
T d1u59a_          89 MAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY  166 (285)
T ss_dssp             CCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEE
T ss_pred             eCCCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCcCchhheeeccCCceeeccchhhhccccccccc
Confidence            9999999998754 456799999999999999999999999 99999999999999999999999999998764432   


Q ss_pred             ----CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       211 ----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                          ...||+.|+|||++.++.++.++|||||||++|||+| |+.||...........     +....+...+..+++++
T Consensus       167 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~-----i~~~~~~~~p~~~~~~l  241 (285)
T d1u59a_         167 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF-----IEQGKRMECPPECPPEL  241 (285)
T ss_dssp             CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHH-----HHTTCCCCCCTTCCHHH
T ss_pred             ccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHH-----HHcCCCCCCCCcCCHHH
Confidence                3457889999999998999999999999999999998 8888876543322221     12222334566778899


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          286 VRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      .+|+.+||+.||++|||+.+|++.|+....
T Consensus       242 ~~li~~cl~~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         242 YALMSDCWIYKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             HHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            999999999999999999999999987654

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-55  Score=401.30  Aligned_cols=245  Identities=17%  Similarity=0.225  Sum_probs=212.6

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      .++|++++.||+|+||+||+|+. .+|+.||||++.+..   ....+.+.+|+.+|+.++||||+++++++.+.+.+|+|
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence            35789999999999999999995 578999999997532   23356789999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--  209 (359)
                      |||+++|+|.+++.  ....+++..++.++.||+.||+|||++ ||+||||||+|||++.+|.+||+|||+|+.....  
T Consensus        84 ~ey~~gg~L~~~~~--~~~~~~e~~~~~~~~qil~al~ylH~~-~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~  160 (337)
T d1o6la_          84 MEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA  160 (337)
T ss_dssp             EECCTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred             eeccCCCchhhhhh--cccCCcHHHHHHHHHHHhhhhhhhhhc-CccccccCHHHeEecCCCCEEEeecccccccccCCc
Confidence            99999999999987  456789999999999999999999999 9999999999999999999999999999865432  


Q ss_pred             --CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       210 --~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                        ....||+.|+|||++.+..|+.++|||||||++|||++|+.||...............      ...++...++++.+
T Consensus       161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~d  234 (337)
T d1o6la_         161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKS  234 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred             ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcC------CCCCCccCCHHHHH
Confidence              2457899999999999999999999999999999999999999877655443332221      12345667889999


Q ss_pred             HHHHhcccCCCCCCC-----HHHHHHH
Q 018244          288 LASRCLQYEPRERPN-----PRSLVTA  309 (359)
Q Consensus       288 li~~cl~~dp~~Rps-----~~~il~~  309 (359)
                      ||.+||++||++||+     +.+++++
T Consensus       235 li~~~L~~dP~~R~~~~~~~~~eil~H  261 (337)
T d1o6la_         235 LLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             HHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             HHHhhccCCchhhcccccccHHHHHcC
Confidence            999999999999995     7888764

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-56  Score=392.53  Aligned_cols=243  Identities=21%  Similarity=0.256  Sum_probs=201.5

Q ss_pred             cCCCCCCcEEEEEEeC---CCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEecCCCC
Q 018244           64 EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        64 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  138 (359)
                      +||+|+||+||+|.+.   .++.||||+++....  ...+.+.+|+++|++++|||||+++++|.. +..+|||||+++|
T Consensus        14 ~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~g   92 (277)
T d1xbba_          14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELG   92 (277)
T ss_dssp             EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTTE
T ss_pred             CcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCCC
Confidence            5899999999999853   346799999975432  235679999999999999999999999864 5678999999999


Q ss_pred             CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC-------C
Q 018244          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-------S  211 (359)
Q Consensus       139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~-------~  211 (359)
                      +|.+++.  ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......       .
T Consensus        93 ~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH~~-~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~  169 (277)
T d1xbba_          93 PLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH  169 (277)
T ss_dssp             EHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC---
T ss_pred             cHHHHHh--hccCCCHHHHHHHHHHHHHHHhhHHhC-CcccCCCcchhhcccccCcccccchhhhhhccccccccccccc
Confidence            9999987  456799999999999999999999999 99999999999999999999999999998654332       3


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ..||+.|+|||.+.+..++.++|||||||++|||+| |+.||...........     +....+...+..++.++.+|+.
T Consensus       170 ~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~-----i~~~~~~~~p~~~~~~~~~li~  244 (277)
T d1xbba_         170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM-----LEKGERMGCPAGCPREMYDLMN  244 (277)
T ss_dssp             -CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH-----HHTTCCCCCCTTCCHHHHHHHH
T ss_pred             cCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHH-----HHcCCCCCCCcccCHHHHHHHH
Confidence            457899999999998999999999999999999998 7888876543322221     1122233455667889999999


Q ss_pred             HhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          291 RCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       291 ~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                      +||+.||++|||+.+|++.|+....
T Consensus       245 ~cl~~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         245 LCWTYDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             HHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHcCCCHhHCcCHHHHHHHhhCHHh
Confidence            9999999999999999998887643

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-56  Score=403.93  Aligned_cols=251  Identities=21%  Similarity=0.282  Sum_probs=206.7

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCC-C-----cEEEEEEeCCCC-CchHHHHHHHHHHHhcC-CCcccccccceeeeCCc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLEN-Q-----FRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDE  127 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~  127 (359)
                      .++|++.+.||+|+||+||+|+... +     ..||+|.+.... ......+.+|+.+|.++ +|||||++++++.+.+.
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~  115 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  115 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence            3578889999999999999998532 2     369999987543 23355789999999998 89999999999999999


Q ss_pred             ceEEEecCCCCCHhhhhhcCCC---------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWET---------------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR  186 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~N  186 (359)
                      .+|||||+++|+|.+++.....                     ..+++..++.++.||+.||+|||++ +|+||||||+|
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~IiHRDlKp~N  194 (325)
T d1rjba_         116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK-SCVHRDLAARN  194 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT-TEEETTCSGGG
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCchhc
Confidence            9999999999999999975321                     3589999999999999999999999 99999999999


Q ss_pred             eeeCCCCCeEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHH
Q 018244          187 IVFDDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDL  259 (359)
Q Consensus       187 Ill~~~~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~  259 (359)
                      ||++.++.+||+|||+|+......      ...||+.|+|||++.++.++.++|||||||++|||+| |..||.......
T Consensus       195 ill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~  274 (325)
T d1rjba_         195 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA  274 (325)
T ss_dssp             EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred             cccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHH
Confidence            999999999999999998654432      2346899999999999999999999999999999998 788886543322


Q ss_pred             HhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 018244          260 IRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV  311 (359)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~  311 (359)
                      ..    ...+....+...+...++++.+||.+||+.||++|||+++|+++|.
T Consensus       275 ~~----~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         275 NF----YKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             HH----HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HH----HHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            21    1122222333455667889999999999999999999999999985

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-56  Score=389.09  Aligned_cols=252  Identities=25%  Similarity=0.351  Sum_probs=204.4

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeee-CCcceEEEec
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLVAEY  134 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~  134 (359)
                      .++|++++.||+|+||.||+|.++ |..||||+++...  ..+.+.+|++++++++||||+++++++.+ .+.+++||||
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey   82 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   82 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             HHHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence            356788899999999999999984 6789999997543  35679999999999999999999999865 4568999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-CCcC
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYS  213 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-~~~~  213 (359)
                      +++|+|.+++.......+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..... ....
T Consensus        83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~-~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~  161 (262)
T d1byga_          83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK  161 (262)
T ss_dssp             CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred             cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC-ceeccccchHhheecCCCCEeecccccceecCCCCcccc
Confidence            9999999999754444689999999999999999999999 9999999999999999999999999999875443 3456


Q ss_pred             CCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHHh
Q 018244          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC  292 (359)
Q Consensus       214 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  292 (359)
                      +|..|+|||++.+..++.++||||||+++|||+| |+.|+............     ........+...++++.+|+.+|
T Consensus       162 ~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i-----~~~~~~~~~~~~~~~~~~li~~c  236 (262)
T d1byga_         162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-----EKGYKMDAPDGCPPAVYEVMKNC  236 (262)
T ss_dssp             CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH-----TTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHH-----HcCCCCCCCccCCHHHHHHHHHH
Confidence            7889999999998999999999999999999998 56555544333222221     22233445666778999999999


Q ss_pred             cccCCCCCCCHHHHHHHHHHhhhc
Q 018244          293 LQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       293 l~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      |+.||++|||+.++++.|++++..
T Consensus       237 l~~dP~~Rps~~~l~~~L~~i~~~  260 (262)
T d1byga_         237 WHLDAAMRPSFLQLREQLEHIKTH  260 (262)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cccCHhHCcCHHHHHHHHHHHHhC
Confidence            999999999999999999988653

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.9e-55  Score=395.75  Aligned_cols=244  Identities=18%  Similarity=0.211  Sum_probs=211.8

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ++|++++.||+|+||+||+|+. .+|+.||||++....   ....+.+.+|+.+|+.++|||||++++++.+.+.+|+||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            5789999999999999999995 568999999997432   233567899999999999999999999999999999999


Q ss_pred             ecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-CC
Q 018244          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RS  211 (359)
Q Consensus       133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-~~  211 (359)
                      ||+.||+|..++.  ....+++..+..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+..... ..
T Consensus        84 E~~~gg~l~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~-~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~  160 (316)
T d1fota_          84 DYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT  160 (316)
T ss_dssp             CCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCC
T ss_pred             eecCCcccccccc--ccccccccHHHHHHHHHHHhhhhhccC-cEEccccCchheeEcCCCCEEEecCccceEecccccc
Confidence            9999999999887  456789999999999999999999999 9999999999999999999999999999886544 45


Q ss_pred             cCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHHH
Q 018244          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR  291 (359)
Q Consensus       212 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (359)
                      ..||+.|+|||++.+..|+.++|||||||++|+|+||+.||...............      ...++...++++.+++.+
T Consensus       161 ~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~  234 (316)
T d1fota_         161 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA------ELRFPPFFNEDVKDLLSR  234 (316)
T ss_dssp             CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHHH
T ss_pred             ccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHH
Confidence            67999999999999999999999999999999999999999876544433332221      123455677889999999


Q ss_pred             hcccCCCCCC-----CHHHHHHH
Q 018244          292 CLQYEPRERP-----NPRSLVTA  309 (359)
Q Consensus       292 cl~~dp~~Rp-----s~~~il~~  309 (359)
                      ||..||.+|+     |+++++++
T Consensus       235 ~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         235 LITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             HTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             HhhhCHHhccccchhhHHHHHcC
Confidence            9999999996     89999874

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-55  Score=395.34  Aligned_cols=247  Identities=17%  Similarity=0.167  Sum_probs=207.3

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC------chHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW------PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .|++++.||+|+||+||+|.. .+|..||||++.....      ...+.+.+|+++|+.++|||||++++++.+.+..+|
T Consensus        11 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i   90 (293)
T d1jksa_          11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL   90 (293)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            489999999999999999995 5789999999965422      235678999999999999999999999999999999


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC----CeEEeccCCcccC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS  206 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~----~~kl~DFg~a~~~  206 (359)
                      ||||+++|+|.+++..  ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++    .+||+|||++...
T Consensus        91 v~E~~~gg~L~~~i~~--~~~l~~~~~~~~~~qi~~al~yLH~~-~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~  167 (293)
T d1jksa_          91 ILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI  167 (293)
T ss_dssp             EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred             EEEcCCCccccchhcc--ccccchhHHHHHHHHHHHHHHhhhhc-ceeecccccceEEEecCCCcccceEecchhhhhhc
Confidence            9999999999999974  45799999999999999999999999 999999999999998776    5999999999876


Q ss_pred             CCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                      ...   ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||..................  .....+...+.
T Consensus       168 ~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~  245 (293)
T d1jksa_         168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE--FEDEYFSNTSA  245 (293)
T ss_dssp             TTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCC--CCHHHHTTSCH
T ss_pred             CCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC--CCchhcCCCCH
Confidence            543   3456899999999999989999999999999999999999999866444332222111100  00111234567


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ++.+||.+||+.||++|||+++++++
T Consensus       246 ~~~~li~~~L~~dP~~R~s~~eil~h  271 (293)
T d1jksa_         246 LAKDFIRRLLVKDPKKRMTIQDSLQH  271 (293)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcC
Confidence            89999999999999999999999863

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-55  Score=385.72  Aligned_cols=253  Identities=20%  Similarity=0.269  Sum_probs=202.6

Q ss_pred             CCcccccccCCCCCCcEEEEEEeCC----CcEEEEEEeCCCCCch-HHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .++|++.+.||+|+||+||+|+...    +..||||.+....... .+.+.+|+++|++++|||||++++++. .+..++
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~i   84 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   84 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEE
Confidence            3578899999999999999998532    4579999987654333 456899999999999999999999995 467899


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-  209 (359)
                      ||||+++|+|.+++.. ....+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++..... 
T Consensus        85 v~E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~-~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~  162 (273)
T d1mp8a_          85 IMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST  162 (273)
T ss_dssp             EEECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred             EEEeccCCcHHhhhhc-cCCCCCHHHHHHHHHHHHHHhhhhccc-CeeccccchhheeecCCCcEEEccchhheeccCCc
Confidence            9999999999998764 456799999999999999999999999 9999999999999999999999999999875433 


Q ss_pred             ----CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHH
Q 018244          210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE  284 (359)
Q Consensus       210 ----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (359)
                          ....||+.|+|||++.+..++.++|||||||++|||+| |..|+.............     .......+..++++
T Consensus       163 ~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~-----~~~~~~~~~~~~~~  237 (273)
T d1mp8a_         163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-----NGERLPMPPNCPPT  237 (273)
T ss_dssp             --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-----TTCCCCCCTTCCHH
T ss_pred             ceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHH-----cCCCCCCCCCCCHH
Confidence                23456889999999999999999999999999999998 777776544332222111     11223455677889


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          285 LVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       285 l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      +.+||.+||+.||++|||+.+|++.|+.+.++
T Consensus       238 ~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  269 (273)
T d1mp8a_         238 LYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  269 (273)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999987654

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.4e-54  Score=396.43  Aligned_cols=245  Identities=17%  Similarity=0.175  Sum_probs=211.4

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEE
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      .++|++++.||+|+||+||+|.. .+|+.||||++....   ....+.+.+|+++|+.++|||||++++++.+....++|
T Consensus        40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v  119 (350)
T d1rdqe_          40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV  119 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccc
Confidence            46799999999999999999995 578999999987432   22356789999999999999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-C
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-R  210 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-~  210 (359)
                      |||+.+|+|.+++..  ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+|+..... .
T Consensus       120 ~e~~~~g~l~~~l~~--~~~l~e~~~~~i~~qi~~aL~yLH~~-~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~  196 (350)
T d1rdqe_         120 MEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW  196 (350)
T ss_dssp             EECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred             cccccccchhhhHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCcCCHHHcccCCCCCEEeeeceeeeecccccc
Confidence            999999999999873  45799999999999999999999999 9999999999999999999999999999876543 4


Q ss_pred             CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHHHH
Q 018244          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS  290 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  290 (359)
                      ...||+.|+|||++.+..++.++|||||||++|+|+||+.||...............      ....+...++++.+|+.
T Consensus       197 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~  270 (350)
T d1rdqe_         197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG------KVRFPSHFSSDLKDLLR  270 (350)
T ss_dssp             CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTCCHHHHHHHH
T ss_pred             cccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcC------CCCCCccCCHHHHHHHH
Confidence            567899999999999999999999999999999999999999876544333322221      12334567789999999


Q ss_pred             HhcccCCCCCC-----CHHHHHHH
Q 018244          291 RCLQYEPRERP-----NPRSLVTA  309 (359)
Q Consensus       291 ~cl~~dp~~Rp-----s~~~il~~  309 (359)
                      +||+.||.+|+     |+++++++
T Consensus       271 ~~L~~dP~kR~~~~r~t~~ell~H  294 (350)
T d1rdqe_         271 NLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             HHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             HHhhhCHHhccccccccHHHHHcC
Confidence            99999999994     89998863

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.1e-54  Score=384.08  Aligned_cols=253  Identities=16%  Similarity=0.185  Sum_probs=205.8

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc---hHHHHHHHHHHHhcCCCcccccccceeeeCCc----c
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDE----R  128 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----~  128 (359)
                      ++|++++.||+|+||+||+|.. .+|+.||||++......   ....+.+|+++|+.++||||+++++++...+.    .
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~   86 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   86 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence            4589999999999999999994 57899999999865433   24568999999999999999999999977543    7


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      ||||||+++|+|.+++.  ....+++..+..++.||+.||+|||++ ||+||||||+|||++.++.++|+|||.+.....
T Consensus        87 ~lvmE~~~g~~L~~~~~--~~~~l~~~~~~~i~~qi~~al~~lH~~-~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~  163 (277)
T d1o6ya_          87 YIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIAD  163 (277)
T ss_dssp             EEEEECCCEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTSCEEECCCTTCEECC-
T ss_pred             EEEEECCCCCEehhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhC-CccCccccCcccccCccccceeehhhhhhhhcc
Confidence            89999999999999886  445799999999999999999999999 999999999999999999999999999875432


Q ss_pred             C-------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHH
Q 018244          209 G-------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE  281 (359)
Q Consensus       209 ~-------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (359)
                      .       ....||+.|+|||++.+..++.++|||||||++|+|+||+.||.................  ..........
T Consensus       164 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~  241 (277)
T d1o6ya_         164 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDP--IPPSARHEGL  241 (277)
T ss_dssp             ---------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCC--CCGGGTSSSC
T ss_pred             ccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCC--CCCchhccCC
Confidence            2       245689999999999998999999999999999999999999976644333222221111  1111223456


Q ss_pred             HHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhh
Q 018244          282 GTELVRLASRCLQYEPRERP-NPRSLVTALVTLQ  314 (359)
Q Consensus       282 ~~~l~~li~~cl~~dp~~Rp-s~~~il~~L~~~~  314 (359)
                      ++++.+|+.+||+.||++|| |++++++.|.++.
T Consensus       242 s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         242 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence            78899999999999999999 8999999988874

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.6e-54  Score=383.68  Aligned_cols=249  Identities=18%  Similarity=0.158  Sum_probs=209.3

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCch---------HHHHHHHHHHHhcCC-Ccccccccceeee
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---------ARQFLEEARAVGQLR-NRRLANLLGCCCE  124 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---------~~~~~~e~~~l~~l~-h~niv~~~~~~~~  124 (359)
                      +.+|++++.||+|+||+||+|+. .+++.||||++.......         .+.+.+|+.+|++++ ||||+++++++.+
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~   81 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   81 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence            56789999999999999999995 578999999997653221         235789999999997 9999999999999


Q ss_pred             CCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                      ++..||||||+++|+|.+++..  ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus        82 ~~~~~ivmE~~~~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nill~~~~~~kl~DFG~a~  158 (277)
T d1phka_          82 NTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKL-NIVHRDLKPENILLDDDMNIKLTDFGFSC  158 (277)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             CcceEEEEEcCCCchHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccccccceEEEcCCCCeEEccchhee
Confidence            9999999999999999999973  45799999999999999999999999 99999999999999999999999999998


Q ss_pred             cCCCC---CCcCCCccccCcccccC------CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccC
Q 018244          205 NSRDG---RSYSTNLAFTPPEYLRT------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG  275 (359)
Q Consensus       205 ~~~~~---~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  275 (359)
                      .....   ....||+.|+|||.+.+      ..++.++||||+||++|+|++|+.||.................  ....
T Consensus       159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~--~~~~  236 (277)
T d1phka_         159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY--QFGS  236 (277)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCT
T ss_pred             EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCC--CCCC
Confidence            76543   34568999999998863      3478899999999999999999999987654433322222111  1122


Q ss_pred             CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ......++++.+|+.+||+.||++|||+.+++++
T Consensus       237 ~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         237 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             cccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            2234678899999999999999999999998763

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.3e-54  Score=388.22  Aligned_cols=253  Identities=23%  Similarity=0.298  Sum_probs=210.3

Q ss_pred             CCcccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCCch-HHHHHHHHHHHhcCCCcccccccceeeeCCcc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  128 (359)
                      .++|++++.||+|+||+||+|+..      ++..||||+++...... .+++.+|+++|+.++||||+++++++...+..
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~   91 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM   91 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCce
Confidence            346788999999999999999853      35789999998655443 45799999999999999999999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWE----------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR  186 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~N  186 (359)
                      +++|||+.+|+|.+++....                      ...+++..+..++.|++.||+|||++ +++||||||+|
T Consensus        92 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~-~ivHrDlKp~N  170 (301)
T d1lufa_          92 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-KFVHRDLATRN  170 (301)
T ss_dssp             EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGG
T ss_pred             EEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC-CeEeeEEcccc
Confidence            99999999999999986421                      23588999999999999999999999 99999999999


Q ss_pred             eeeCCCCCeEEeccCCcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCC-CCCcchhHH
Q 018244          187 IVFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH-IPPSHALDL  259 (359)
Q Consensus       187 Ill~~~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~-p~~~~~~~~  259 (359)
                      ||++.++.+||+|||+++.....      ....+|+.|+|||.+.+..++.++|||||||++|||++|.. ||.......
T Consensus       171 ILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e  250 (301)
T d1lufa_         171 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE  250 (301)
T ss_dssp             EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred             eEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHH
Confidence            99999999999999998754322      23457889999999999999999999999999999999975 454443332


Q ss_pred             HhhhhhhhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 018244          260 IRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ  314 (359)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~  314 (359)
                      .....     ........+...++++.+|+.+||+.||++||||.+|++.|+++.
T Consensus       251 ~~~~v-----~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         251 VIYYV-----RDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HHHHH-----HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHH-----HcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            22211     111223345567789999999999999999999999999999874

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-54  Score=392.92  Aligned_cols=250  Identities=16%  Similarity=0.177  Sum_probs=210.0

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      -|++|.+++.||+|+||+||+|.. .++..||||.+.... .+...+.+|+++|+.++|||||++++++.+.+.+|||||
T Consensus         3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE   81 (321)
T d1tkia_           3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             CccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence            367899999999999999999995 468899999998754 334568899999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC--CCCeEEeccCCcccCCCCC-
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRDGR-  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~--~~~~kl~DFg~a~~~~~~~-  210 (359)
                      ||++|+|.+++.. ....+++..+..|+.||+.||.|||++ ||+||||||+|||++.  ...+||+|||+++...... 
T Consensus        82 ~~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~-~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~  159 (321)
T d1tkia_          82 FISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN  159 (321)
T ss_dssp             CCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred             cCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHc-CCCcccccccceeecCCCceEEEEcccchhhccccCCc
Confidence            9999999999964 344799999999999999999999999 9999999999999985  4589999999998765543 


Q ss_pred             --CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          211 --SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       211 --~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                        ...+|+.|+|||.+.+..++.++|||||||++|+|++|..||..................  .........++++.+|
T Consensus       160 ~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~l  237 (321)
T d1tkia_         160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT--FDEEAFKEISIEAMDF  237 (321)
T ss_dssp             EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--CCHHHHTTSCHHHHHH
T ss_pred             ccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CChhhccCCCHHHHHH
Confidence              346789999999999999999999999999999999999999876544333222221110  0000112356789999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 018244          289 ASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~  309 (359)
                      +.+||..||++|||+.|++++
T Consensus       238 i~~~L~~dp~~R~s~~eil~h  258 (321)
T d1tkia_         238 VDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             HHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHccCChhHCcCHHHHhcC
Confidence            999999999999999999975

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-54  Score=390.08  Aligned_cols=252  Identities=18%  Similarity=0.269  Sum_probs=206.2

Q ss_pred             CcccccccCCCCCCcEEEEEEeC-CCc----EEEEEEeCCCC-CchHHHHHHHHHHHhcCCCcccccccceeeeCCcceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE-NQF----RIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  130 (359)
                      .+|++++.||+|+||+||+|.+. +|+    .||+|.+.... ....+.+.+|+++|++++|||||+++++|.++ ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            46899999999999999999853 443    58999887543 33467799999999999999999999999764 5778


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~  210 (359)
                      ++||+.+|+|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus        88 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~-~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  165 (317)
T d1xkka_          88 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  165 (317)
T ss_dssp             EEECCTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred             EEEeccCCcccccccc-cccCCCHHHHHHHHHHHHHHHHHHHHc-CcccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence            8999999999998865 566799999999999999999999999 99999999999999999999999999998764332


Q ss_pred             ------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChHHHH
Q 018244          211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT  283 (359)
Q Consensus       211 ------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
                            ...||+.|+|||++.++.++.++|||||||++|||+| |..||..........     .+....+...+..+++
T Consensus       166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~-----~i~~~~~~~~p~~~~~  240 (317)
T d1xkka_         166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-----ILEKGERLPQPPICTI  240 (317)
T ss_dssp             C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHH-----HHHHTCCCCCCTTBCH
T ss_pred             ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHH-----HHHcCCCCCCCcccCH
Confidence                  2357899999999999999999999999999999999 566665443322221     1222223344566788


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       284 ~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      ++.+|+.+||+.||++|||+.++++.|..+.+.
T Consensus       241 ~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~  273 (317)
T d1xkka_         241 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  273 (317)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhC
Confidence            999999999999999999999999999887543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-54  Score=384.53  Aligned_cols=251  Identities=21%  Similarity=0.278  Sum_probs=201.4

Q ss_pred             CCcccccccCCCCCCcEEEEEEeC--C--CcEEEEEEeCCCC---CchHHHHHHHHHHHhcCCCcccccccceeeeCCcc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLE--N--QFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  128 (359)
                      ..+|++++.||+|+||+||+|+..  +  ...||||++....   ....+.+.+|+.+|+.++||||+++++++.+ ...
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~   85 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPM   85 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cch
Confidence            467899999999999999999843  2  2368999997643   2335678999999999999999999999976 467


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      ++||||+++|+|.+++.. ....+++..+..++.||+.||.|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus        86 ~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~-~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~  163 (273)
T d1u46a_          86 KMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  163 (273)
T ss_dssp             EEEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             heeeeeecCcchhhhhhc-ccCCCCHHHHHHHHHHHHHHHHHhhhC-CEeeeeecHHHhccccccceeeccchhhhhccc
Confidence            899999999999998864 345699999999999999999999999 999999999999999999999999999987654


Q ss_pred             CC-------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhhhhhccccccCCCChH
Q 018244          209 GR-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD  280 (359)
Q Consensus       209 ~~-------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (359)
                      ..       ...++..|+|||.+.+..++.++||||||+++|||+| |..||.............    ........+..
T Consensus       164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~----~~~~~~~~~~~  239 (273)
T d1u46a_         164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID----KEGERLPRPED  239 (273)
T ss_dssp             -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH----TSCCCCCCCTT
T ss_pred             CCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHH----hCCCCCCCccc
Confidence            32       2346789999999999999999999999999999998 788887664444332222    22223334556


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 018244          281 EGTELVRLASRCLQYEPRERPNPRSLVTALVTL  313 (359)
Q Consensus       281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~  313 (359)
                      .+.++.+|+.+||+.||++|||+.+|++.|++.
T Consensus       240 ~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         240 CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            778899999999999999999999999998875

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-54  Score=388.28  Aligned_cols=257  Identities=21%  Similarity=0.285  Sum_probs=210.2

Q ss_pred             CCCcccccccCCCCCCcEEEEEEeC-CCc--EEEEEEeCCCC-CchHHHHHHHHHHHhcC-CCcccccccceeeeCCcce
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQF--RIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  129 (359)
                      +|++|++.+.||+|+||+||+|++. ++.  .||||.+.... ....+.+.+|+++|+++ +|||||++++++.+.+..+
T Consensus         8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~   87 (309)
T d1fvra_           8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY   87 (309)
T ss_dssp             CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred             CHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence            4677888889999999999999854 443  57888886443 23455789999999999 7999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcC--------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCe
Q 018244          130 LVAEYMPNDTLAKHLFHW--------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP  195 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~  195 (359)
                      +||||+++|+|.+++...              ....+++..+..++.||+.||.|||++ +++||||||+|||++.++.+
T Consensus        88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~-~iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCE
T ss_pred             EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC-CccccccccceEEEcCCCce
Confidence            999999999999999642              236799999999999999999999999 99999999999999999999


Q ss_pred             EEeccCCcccCCCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCC-CCcchhHHHhhhhhhhhccc
Q 018244          196 RLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI-PPSHALDLIRDRNIQTLTDS  271 (359)
Q Consensus       196 kl~DFg~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p-~~~~~~~~~~~~~~~~~~~~  271 (359)
                      ||+|||+++.....   ....||..|+|||.+.++.++.++|||||||++|||++|..| +.......+....     ..
T Consensus       167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i-----~~  241 (309)
T d1fvra_         167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-----PQ  241 (309)
T ss_dssp             EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHG-----GG
T ss_pred             EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHH-----Hh
Confidence            99999999765432   244678999999999999999999999999999999998754 4443333322221     11


Q ss_pred             cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 018244          272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT  317 (359)
Q Consensus       272 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~  317 (359)
                      ..+...+...++++.+||.+||+.||++|||+.+|++.|+++.+..
T Consensus       242 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~  287 (309)
T d1fvra_         242 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  287 (309)
T ss_dssp             TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             cCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence            2233455667889999999999999999999999999999987543

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-54  Score=391.88  Aligned_cols=247  Identities=17%  Similarity=0.148  Sum_probs=200.0

Q ss_pred             Cccccccc-CCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcC-CCcccccccceeee----CCcce
Q 018244           57 AMENIVSE-HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE----GDERL  129 (359)
Q Consensus        57 ~~~~~~~~-lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~----~~~~~  129 (359)
                      .+|.++++ ||+|+||+||+|.. .+++.||||++..     ...+.+|+.++.++ +|||||+++++|.+    ...+|
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence            46788865 89999999999995 6789999999864     34678899987654 89999999999875    35689


Q ss_pred             EEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC---CCCeEEeccCCcccC
Q 018244          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNS  206 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~---~~~~kl~DFg~a~~~  206 (359)
                      ||||||+||+|.+++.......+++..++.|+.||+.||+|||++ +|+||||||+|||+++   ++.+||+|||+++..
T Consensus        86 ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~-~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~  164 (335)
T d2ozaa1          86 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  164 (335)
T ss_dssp             EEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             EEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc-CCccccccccccccccccccccccccccceeeec
Confidence            999999999999999765556799999999999999999999999 9999999999999985   567999999999875


Q ss_pred             CCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccccc--CCCChHH
Q 018244          207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE--GQFSSDE  281 (359)
Q Consensus       207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  281 (359)
                      ...   ....||+.|+|||++.+..|+.++|||||||++|+|+||+.||...............+......  .......
T Consensus       165 ~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  244 (335)
T d2ozaa1         165 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV  244 (335)
T ss_dssp             CCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHS
T ss_pred             cCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccC
Confidence            543   34578999999999998899999999999999999999999987653222211111111111111  1111346


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          282 GTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       282 ~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ++++.+|+.+||+.||++|||+.+++++
T Consensus       245 s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         245 SEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            7889999999999999999999999885

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.1e-53  Score=392.53  Aligned_cols=248  Identities=17%  Similarity=0.131  Sum_probs=202.9

Q ss_pred             CCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC---chHHHH---HHHHHHHhcCCCcccccccceeeeCCcc
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQF---LEEARAVGQLRNRRLANLLGCCCEGDER  128 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~---~~e~~~l~~l~h~niv~~~~~~~~~~~~  128 (359)
                      .++|++++.||+|+||+||+|+. .+|+.||||++.....   .....+   .+++++++.++|||||++++++.+.+.+
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~   82 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL   82 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence            35788999999999999999995 4689999999864321   112223   3457788888999999999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      ||||||+++|+|.+++.  ....+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus        83 ~ivmE~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~ylH~~-~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~  159 (364)
T d1omwa3          83 SFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSK  159 (364)
T ss_dssp             EEEECCCCSCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECSSSCEEECCCTTCEECSS
T ss_pred             EEEEEecCCCcHHHHHH--hcccccHHHHHHHHHHHHHHHHHHHHC-CccceeeccceeEEcCCCcEEEeeeceeeecCC
Confidence            99999999999999997  346789999999999999999999999 999999999999999999999999999987654


Q ss_pred             C--CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHH
Q 018244          209 G--RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL  285 (359)
Q Consensus       209 ~--~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (359)
                      .  ....||+.|+|||++.. ..|+.++|||||||++|||+||+.||........... .....  ......+...++++
T Consensus       160 ~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~-~~~~~--~~~~~~~~~~s~~~  236 (364)
T d1omwa3         160 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-DRMTL--TMAVELPDSFSPEL  236 (364)
T ss_dssp             SCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHH-HHHSS--SCCCCCCSSSCHHH
T ss_pred             CcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhcc--cCCCCCCCCCCHHH
Confidence            3  35679999999999975 4689999999999999999999999876432211110 01111  11223445677899


Q ss_pred             HHHHHHhcccCCCCCCC-----HHHHHHH
Q 018244          286 VRLASRCLQYEPRERPN-----PRSLVTA  309 (359)
Q Consensus       286 ~~li~~cl~~dp~~Rps-----~~~il~~  309 (359)
                      .+||.+||+.||++|||     +++++++
T Consensus       237 ~~li~~~L~~dP~~R~t~~~~~a~eil~H  265 (364)
T d1omwa3         237 RSLLEGLLQRDVNRRLGCLGRGAQEVKES  265 (364)
T ss_dssp             HHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred             HHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence            99999999999999999     6888764

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-54  Score=388.28  Aligned_cols=243  Identities=18%  Similarity=0.234  Sum_probs=206.5

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCC---CchHHHHHHHHHHHh-cCCCcccccccceeeeCCcceEE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVG-QLRNRRLANLLGCCCEGDERLLV  131 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~~~~~~lv  131 (359)
                      ++|.+++.||+|+||+||+|+. .+++.||||++.+..   ....+.+..|..++. .++|||||++++++.+++.+|||
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            4788999999999999999995 568999999997532   223456677777665 68999999999999999999999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC--
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~--  209 (359)
                      |||+++|+|.+++.  ....+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.....  
T Consensus        82 mEy~~~g~L~~~i~--~~~~~~e~~~~~~~~qi~~al~ylH~~-~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~  158 (320)
T d1xjda_          82 MEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA  158 (320)
T ss_dssp             EECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred             EeecCCCcHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCcccceeecCCCceeccccchhhhcccccc
Confidence            99999999999997  445689999999999999999999999 9999999999999999999999999999865432  


Q ss_pred             --CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHH
Q 018244          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR  287 (359)
Q Consensus       210 --~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (359)
                        ....||+.|+|||++.+..++.++|||||||++|+|+||+.||.+.............      ...++...++++.+
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~d  232 (320)
T d1xjda_         159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD------NPFYPRWLEKEAKD  232 (320)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred             cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCccCCHHHHH
Confidence              3457899999999999999999999999999999999999999876554433332211      22345567889999


Q ss_pred             HHHHhcccCCCCCCCHH-HHHH
Q 018244          288 LASRCLQYEPRERPNPR-SLVT  308 (359)
Q Consensus       288 li~~cl~~dp~~Rps~~-~il~  308 (359)
                      |+.+||+.||++|||+. ++++
T Consensus       233 li~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         233 LLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             HHHHHSCSSGGGSBTTBSCGGG
T ss_pred             HHHHhcccCCCCCcCHHHHHHh
Confidence            99999999999999996 6764

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-53  Score=380.62  Aligned_cols=253  Identities=22%  Similarity=0.310  Sum_probs=207.8

Q ss_pred             CcccccccCCCCCCcEEEEEEeCC--------CcEEEEEEeCCCCCc-hHHHHHHHHHHHhcC-CCcccccccceeeeCC
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLEN--------QFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGD  126 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~  126 (359)
                      ++|++.+.||+|+||.||+|+...        +..||||++...... ...++.+|+..+.++ +|||||+++++|.+++
T Consensus        13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~   92 (299)
T d1fgka_          13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   92 (299)
T ss_dssp             GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence            578899999999999999998422        347999999876543 346788899999888 7999999999999999


Q ss_pred             cceEEEecCCCCCHhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC
Q 018244          127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD  192 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~  192 (359)
                      ..++||||+++|+|.+++....              ...+++.+++.++.||+.||+|||++ +++||||||+|||++.+
T Consensus        93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~-~ivHrDiKp~NiLl~~~  171 (299)
T d1fgka_          93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTED  171 (299)
T ss_dssp             SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTT
T ss_pred             eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC-CEEeeeecccceeecCC
Confidence            9999999999999999997532              24689999999999999999999999 99999999999999999


Q ss_pred             CCeEEeccCCcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCcchhHHHhhhhh
Q 018244          193 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI  265 (359)
Q Consensus       193 ~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt-g~~p~~~~~~~~~~~~~~  265 (359)
                      +.+||+|||+++.....      ....+|+.|+|||.+.++.|+.++||||||+++|||++ |..||..........   
T Consensus       172 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~---  248 (299)
T d1fgka_         172 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK---  248 (299)
T ss_dssp             CCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH---
T ss_pred             CCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHH---
Confidence            99999999998865432      23467889999999999999999999999999999998 566666554433322   


Q ss_pred             hhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                        .+........+...++++.+|+.+||+.||++|||+.+|++.|+++..
T Consensus       249 --~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         249 --LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             --HHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --HHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence              222223344556677899999999999999999999999999998743

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-54  Score=383.95  Aligned_cols=255  Identities=20%  Similarity=0.246  Sum_probs=198.2

Q ss_pred             CCcccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcC-CCcccccccceeeeC-C
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG-D  126 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-~  126 (359)
                      .++|++.+.||+|+||.||+|...      +++.||||++...... ..+.+.+|...+.++ +|+||+.+++++... .
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   91 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence            357889999999999999999842      2468999999765433 345678888888877 689999999987664 4


Q ss_pred             cceEEEecCCCCCHhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC
Q 018244          127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD  192 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~  192 (359)
                      .+++||||+++|+|.+++....              ...+++..+..++.||+.||+|||++ +|+||||||+|||++++
T Consensus        92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~-~ivHrDlKp~NILl~~~  170 (299)
T d1ywna1          92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEK  170 (299)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECGG
T ss_pred             eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC-CCcCCcCCccceeECCC
Confidence            6899999999999999996432              23589999999999999999999999 99999999999999999


Q ss_pred             CCeEEeccCCcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCC-CCCcchhHHHhhhhh
Q 018244          193 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH-IPPSHALDLIRDRNI  265 (359)
Q Consensus       193 ~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~-p~~~~~~~~~~~~~~  265 (359)
                      +.+||+|||+|+.....      ....||+.|+|||++.+..++.++|||||||++|||+||.. ||..........   
T Consensus       171 ~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~---  247 (299)
T d1ywna1         171 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC---  247 (299)
T ss_dssp             GCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHH---
T ss_pred             CcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHH---
Confidence            99999999999865432      23468899999999999999999999999999999999765 454432221111   


Q ss_pred             hhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 018244          266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK  315 (359)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~  315 (359)
                       ..+........+...++++.+|+.+||+.||++|||+.+++++|+.+.+
T Consensus       248 -~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq  296 (299)
T d1ywna1         248 -RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  296 (299)
T ss_dssp             -HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -HHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence             1111222334456677889999999999999999999999999998743

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-53  Score=380.25  Aligned_cols=248  Identities=23%  Similarity=0.319  Sum_probs=203.8

Q ss_pred             ccCCCCCCcEEEEEEeCC----CcEEEEEEeCCC-CCchHHHHHHHHHHHhcCCCcccccccceeeeC-CcceEEEecCC
Q 018244           63 SEHGEKAPNVVYKGKLEN----QFRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANLLGCCCEG-DERLLVAEYMP  136 (359)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~~~  136 (359)
                      +.||+|+||+||+|++.+    ...||||+++.. .....+.+.+|+++|++++||||++++|++... ...++||||++
T Consensus        33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~  112 (311)
T d1r0pa_          33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK  112 (311)
T ss_dssp             EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCT
T ss_pred             eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEee
Confidence            467999999999998643    236999999754 333457799999999999999999999998764 57899999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC------
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR------  210 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~------  210 (359)
                      +|+|.+++.. ....+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+|||+++......      
T Consensus       113 ~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~-~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~  190 (311)
T d1r0pa_         113 HGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN  190 (311)
T ss_dssp             TCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTC
T ss_pred             cCchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhccc-CcccCCccHHhEeECCCCCEEEecccchhhcccccccccee
Confidence            9999998864 556788999999999999999999999 99999999999999999999999999998654332      


Q ss_pred             --CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHHHHHHHH
Q 018244          211 --SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL  288 (359)
Q Consensus       211 --~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (359)
                        ...||..|+|||.+.+..++.++||||||+++|||+||+.||........    ....+....+...+...++++.+|
T Consensus       191 ~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~----~~~~i~~g~~~~~p~~~~~~l~~l  266 (311)
T d1r0pa_         191 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD----ITVYLLQGRRLLQPEYCPDPLYEV  266 (311)
T ss_dssp             TTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC----------CHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred             cccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHH----HHHHHHcCCCCCCcccCcHHHHHH
Confidence              24578899999999999999999999999999999998888765432211    111111112233455667889999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          289 ASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       289 i~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      +.+||+.||++|||+.||++.|+.+...
T Consensus       267 i~~cl~~dP~~RPs~~ei~~~L~~i~~~  294 (311)
T d1r0pa_         267 MLKCWHPKAEMRPSFSELVSRISAIFST  294 (311)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence            9999999999999999999999998764

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-53  Score=382.11  Aligned_cols=246  Identities=20%  Similarity=0.200  Sum_probs=195.2

Q ss_pred             ccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCch-----HHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           61 IVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      .++.||+|+||+||+|.. .+|+.||||++.......     .+.+.+|+++|+.++|||||++++++...+..+|||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            456789999999999995 568999999997543222     23588999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----C
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~  210 (359)
                      +.++++..+..  ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....    .
T Consensus        82 ~~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~-~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~  158 (299)
T d1ua2a_          82 METDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYT  158 (299)
T ss_dssp             CSEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCC
T ss_pred             hcchHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhcc-ceecccCCcceEEecCCCccccccCccccccCCCccccc
Confidence            99887766653  456799999999999999999999999 9999999999999999999999999999876543    2


Q ss_pred             CcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccc----------------
Q 018244          211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL----------------  273 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----------------  273 (359)
                      ...||+.|+|||++.+. .++.++|||||||++|||+||..||..................+..                
T Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~  238 (299)
T d1ua2a_         159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK  238 (299)
T ss_dssp             CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC
T ss_pred             ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhc
Confidence            45689999999998755 5799999999999999999999888765332222111111000000                


Q ss_pred             -cCC-----CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          274 -EGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       274 -~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                       ...     .....++++.+|+.+||+.||++|||++|++++
T Consensus       239 ~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  280 (299)
T ss_dssp             CCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             cCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence             000     012346789999999999999999999999863

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-52  Score=375.86  Aligned_cols=251  Identities=18%  Similarity=0.241  Sum_probs=200.9

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      ++|++++.||+|+||+||+|.. .+|+.||||++......  ..+.+.+|+++|++++|||||++++++.+++..++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            4788999999999999999995 67899999999754322  25678999999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----  209 (359)
                      |+.+ ++.+++.......+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....    
T Consensus        82 ~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~-~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~  159 (298)
T d1gz8a_          82 FLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY  159 (298)
T ss_dssp             CCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCT
T ss_pred             ecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC-CEEccccCchheeecccCcceeccCCcceeccCCcccc
Confidence            9976 555666554667899999999999999999999999 9999999999999999999999999999765432    


Q ss_pred             CCcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcc------------ccccCC
Q 018244          210 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD------------SCLEGQ  276 (359)
Q Consensus       210 ~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~------------~~~~~~  276 (359)
                      ....||+.|+|||.+.... ++.++|||||||++|+|++|+.||..................            ......
T Consensus       160 ~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  239 (298)
T d1gz8a_         160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS  239 (298)
T ss_dssp             TCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred             eeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccc
Confidence            3447899999999887665 578999999999999999999998765322211111100000            000000


Q ss_pred             -----------CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          277 -----------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       277 -----------~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                 .....+.++.+|+.+||+.||++|||+.|++++
T Consensus       240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             SCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence                       012345789999999999999999999999874

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-52  Score=378.63  Aligned_cols=255  Identities=20%  Similarity=0.300  Sum_probs=211.3

Q ss_pred             CcccccccCCCCCCcEEEEEEe------CCCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcC-CCcccccccceeeeCCcc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGDER  128 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~  128 (359)
                      .+|++.+.||+|+||.||+|++      .+++.||||+++..... ....+.+|+.+++.+ +|||||++++++.+....
T Consensus        23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~  102 (311)
T d1t46a_          23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT  102 (311)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence            4778888999999999999985      24678999999865433 345689999999999 699999999999999999


Q ss_pred             eEEEecCCCCCHhhhhhcCC----------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWE----------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD  192 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~----------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~  192 (359)
                      ++||||+++|+|.+++....                ...+++..+..++.||+.||+|||++ +++||||||+||+++.+
T Consensus       103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~-~ivHrDLKp~NIl~~~~  181 (311)
T d1t46a_         103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNILLTHG  181 (311)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEETT
T ss_pred             EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-Ceeeccccccccccccc
Confidence            99999999999999987532                23689999999999999999999999 99999999999999999


Q ss_pred             CCeEEeccCCcccCCCCC------CcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCC-cchhHHHhhhhh
Q 018244          193 VNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP-SHALDLIRDRNI  265 (359)
Q Consensus       193 ~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~-~~~~~~~~~~~~  265 (359)
                      +.+|++|||+++......      ...||+.|+|||.+.++.++.++||||||+++|||+|++.|+. .......    .
T Consensus       182 ~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~----~  257 (311)
T d1t46a_         182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK----F  257 (311)
T ss_dssp             TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH----H
T ss_pred             CcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH----H
Confidence            999999999998765432      3456899999999999999999999999999999999555543 3322111    1


Q ss_pred             hhhccccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 018244          266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD  316 (359)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~  316 (359)
                      ..++....+...+...+.++.+||.+||+.||++|||+.+|++.|+++..+
T Consensus       258 ~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         258 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence            122222333444556778999999999999999999999999999876543

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-52  Score=375.78  Aligned_cols=252  Identities=21%  Similarity=0.309  Sum_probs=208.7

Q ss_pred             CcccccccCCCCCCcEEEEEEeC------CCcEEEEEEeCCCCCc-hHHHHHHHHHHHhcCCCcccccccceeeeCCcce
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  129 (359)
                      +++.+.+.||+|+||+||+|.+.      ++..||||+++..... ....+.+|++++++++||||+++++++...+..+
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~   99 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL   99 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence            56788889999999999999853      2568999999765432 3456899999999999999999999999999999


Q ss_pred             EEEecCCCCCHhhhhhcC--------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccC
Q 018244          130 LVAEYMPNDTLAKHLFHW--------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG  201 (359)
Q Consensus       130 lv~e~~~~gsL~~~l~~~--------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg  201 (359)
                      +||||+++|+|.+++...        ....+++..+..++.|++.||.|||++ +|+||||||+|||+++++++||+|||
T Consensus       100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~-~ivHrDlk~~NiLld~~~~~Kl~DFG  178 (308)
T d1p4oa_         100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG  178 (308)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCSGGGEEECTTCCEEECCTT
T ss_pred             EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC-CeeeceEcCCceeecCCceEEEeecc
Confidence            999999999999988642        224579999999999999999999999 99999999999999999999999999


Q ss_pred             CcccCCCC------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCC-CCCCcchhHHHhhhhhhhhcccccc
Q 018244          202 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK-HIPPSHALDLIRDRNIQTLTDSCLE  274 (359)
Q Consensus       202 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~  274 (359)
                      +++.....      ....+|+.|+|||.+.++.++.++||||||+++|||+||. .|+............    .+ ...
T Consensus       179 la~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i----~~-~~~  253 (308)
T d1p4oa_         179 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV----ME-GGL  253 (308)
T ss_dssp             CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHH----HT-TCC
T ss_pred             cceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHH----Hh-CCC
Confidence            99865432      2335789999999999999999999999999999999996 444443332222211    11 122


Q ss_pred             CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 018244          275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ  314 (359)
Q Consensus       275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~  314 (359)
                      ...+..+++.+.+|+.+||+.||++|||+.+|++.|++..
T Consensus       254 ~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~  293 (308)
T d1p4oa_         254 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM  293 (308)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            3345567788999999999999999999999999987763

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4.3e-52  Score=370.97  Aligned_cols=249  Identities=16%  Similarity=0.211  Sum_probs=201.7

Q ss_pred             CcccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEec
Q 018244           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  134 (359)
                      ++|+++++||+|+||+||+|+.++|+.||||++......  ..+.+.+|+.+|++++||||+++++++...+..+++|||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            478899999999999999999889999999999765322  256789999999999999999999999999999999999


Q ss_pred             CCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC----C
Q 018244          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (359)
Q Consensus       135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~----~  210 (359)
                      +.++.+..+..  ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||.+......    .
T Consensus        82 ~~~~~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~-~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~  158 (286)
T d1ob3a_          82 LDQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT  158 (286)
T ss_dssp             CSEEHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred             ehhhhHHHHHh--hcCCcchhhhHHHHHHHHHHHHHhccC-cEEecCCCCceeeEcCCCCEEecccccceecccCccccc
Confidence            98876665554  457799999999999999999999999 9999999999999999999999999998765433    3


Q ss_pred             CcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcc-------------------
Q 018244          211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD-------------------  270 (359)
Q Consensus       211 ~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~-------------------  270 (359)
                      ...+++.|+|||.+.+. .++.++|||||||++|||++|+.||..................                   
T Consensus       159 ~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T d1ob3a_         159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF  238 (286)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred             eecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccc
Confidence            44678999999998765 4789999999999999999999998754322221111100000                   


Q ss_pred             ----ccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 018244          271 ----SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVT  308 (359)
Q Consensus       271 ----~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~  308 (359)
                          ...........++++.+|+.+||+.||++|||+.|+++
T Consensus       239 ~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                00001112345678999999999999999999999985

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-52  Score=373.85  Aligned_cols=254  Identities=15%  Similarity=0.186  Sum_probs=196.7

Q ss_pred             cccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHH--HHHHHHHhcCCCcccccccceeeeCC----cceEE
Q 018244           58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF--LEEARAVGQLRNRRLANLLGCCCEGD----ERLLV  131 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~--~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv  131 (359)
                      +|.+.+.||+|+||+||+|+. +|..||||++....   ...+  ..|+..+..++|||||++++++.+.+    .+++|
T Consensus         4 ~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv   79 (303)
T d1vjya_           4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEE
Confidence            455667789999999999997 57799999997543   2333  34555666789999999999998754    57999


Q ss_pred             EecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------CCcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-------ERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-------~~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                      |||+++|+|.+++.+   ..++|..+..++.|++.||+|||+.       .+|+||||||+||||+.++.+||+|||+++
T Consensus        80 ~Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~  156 (303)
T d1vjya_          80 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             EecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccc
Confidence            999999999999964   4699999999999999999999962       399999999999999999999999999988


Q ss_pred             cCCCC--------CCcCCCccccCcccccCCC------CCCccchhhHHHHHHHHHhCCCCCCcchhHH-----------
Q 018244          205 NSRDG--------RSYSTNLAFTPPEYLRTGR------VTPESVMYSFGTLLLDLLSGKHIPPSHALDL-----------  259 (359)
Q Consensus       205 ~~~~~--------~~~~~t~~y~aPE~~~~~~------~~~~~Di~slG~il~elltg~~p~~~~~~~~-----------  259 (359)
                      .....        ....||+.|+|||++.+..      ++.++|||||||++|||+||..|+.......           
T Consensus       157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~  236 (303)
T d1vjya_         157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP  236 (303)
T ss_dssp             EEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             cccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccc
Confidence            65432        2456899999999987542      6778999999999999999987653221100           


Q ss_pred             HhhhhhhhhccccccCCC-----ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 018244          260 IRDRNIQTLTDSCLEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE  318 (359)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~  318 (359)
                      ..............++..     +......+.+|+.+||+.||++|||+.||++.|+++.+...
T Consensus       237 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~~  300 (303)
T d1vjya_         237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG  300 (303)
T ss_dssp             CHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             hHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhcC
Confidence            000011111111122222     23456779999999999999999999999999999877654

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-53  Score=373.68  Aligned_cols=238  Identities=19%  Similarity=0.268  Sum_probs=198.5

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc------hHHHHHHHHHHHhcCC--CcccccccceeeeCCc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLR--NRRLANLLGCCCEGDE  127 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~  127 (359)
                      ++|++.+.||+|+||+||+|+. .+|..||||++......      ...++.+|+.+|+.++  |||||++++++.+.+.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            3688889999999999999995 57899999998754221      1233678999999986  8999999999999999


Q ss_pred             ceEEEecCCC-CCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC-CCCeEEeccCCccc
Q 018244          128 RLLVAEYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKN  205 (359)
Q Consensus       128 ~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~-~~~~kl~DFg~a~~  205 (359)
                      .++||||+.+ +++.+++.  ....+++..++.++.||+.||+|||++ +|+||||||+|||++. ++.+||+|||+++.
T Consensus        84 ~~lv~e~~~~~~~l~~~~~--~~~~l~e~~~~~~~~qi~~al~~lH~~-~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~  160 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGAL  160 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEEEEeccCcchHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CCccccCcccceEEecCCCeEEECcccccee
Confidence            9999999976 57888776  345799999999999999999999999 9999999999999985 57899999999986


Q ss_pred             CCCC--CCcCCCccccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCChHHH
Q 018244          206 SRDG--RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG  282 (359)
Q Consensus       206 ~~~~--~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
                      ....  ....||+.|+|||++.+..+ +.++|||||||++|+|+||+.||.....  ....          ...++...+
T Consensus       161 ~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--i~~~----------~~~~~~~~s  228 (273)
T d1xwsa_         161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--IIRG----------QVFFRQRVS  228 (273)
T ss_dssp             CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHC----------CCCCSSCCC
T ss_pred             cccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH--Hhhc----------ccCCCCCCC
Confidence            5543  45678999999999987765 5679999999999999999998875421  1111          112334567


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          283 TELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       283 ~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      +++.+|+.+||+.||++|||++|++++
T Consensus       229 ~~~~~li~~~L~~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         229 SECQHLIRWCLALRPSDRPTFEEIQNH  255 (273)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            889999999999999999999999864

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-51  Score=371.89  Aligned_cols=251  Identities=18%  Similarity=0.193  Sum_probs=197.8

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CC-CcEEEEEEeCCCCC--chHHHHHHHHHHHhcC---CCcccccccceeee-----
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-EN-QFRIAVKRFNRSAW--PDARQFLEEARAVGQL---RNRRLANLLGCCCE-----  124 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~-----  124 (359)
                      .+|++++.||+|+||+||+|.. .+ ++.||||++.....  .....+.+|+.+|+.|   +||||++++++|..     
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~   86 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   86 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccccc
Confidence            5789999999999999999985 34 66799999865322  1223456777776665   79999999999853     


Q ss_pred             CCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                      ....+++|||+.++.+.... ......+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus        87 ~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~-~ivHrDiKp~NILi~~~~~~kl~dfg~~~  164 (305)
T d1blxa_          87 ETKLTLVFEHVDQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLAR  164 (305)
T ss_dssp             EEEEEEEEECCSCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             CceEEEEEEeccCCchhhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEEecCCCccEEEEcCCCCeeecchhhhh
Confidence            34689999999887655443 33667799999999999999999999999 99999999999999999999999999988


Q ss_pred             cCCCC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccc----------
Q 018244          205 NSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS----------  271 (359)
Q Consensus       205 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~----------  271 (359)
                      .....   ....||+.|+|||++.+..|+.++||||+||++|||++|+.||..................+          
T Consensus       165 ~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  244 (305)
T d1blxa_         165 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA  244 (305)
T ss_dssp             CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred             hhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccccccc
Confidence            65433   35678999999999999999999999999999999999999997654322221111110000          


Q ss_pred             -----------cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          272 -----------CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       272 -----------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                 .....+....++.+.+|+.+||+.||++|||+.|++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         245 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             chhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                       00011233457789999999999999999999999874

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-50  Score=368.10  Aligned_cols=252  Identities=16%  Similarity=0.216  Sum_probs=196.5

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeCC------c
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD------E  127 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~  127 (359)
                      ..|++++.||+|+||+||+|.. .+|+.||||++......  ..+.+.+|+++|+.++|||||+++++|...+      .
T Consensus        18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~   97 (346)
T d1cm8a_          18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD   97 (346)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred             CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccce
Confidence            4688999999999999999995 56999999999865332  2457889999999999999999999997654      4


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      +++||||+ +++|..++.   ...+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++...
T Consensus        98 ~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~-~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~  172 (346)
T d1cm8a_          98 FYLVMPFM-GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQAD  172 (346)
T ss_dssp             CEEEEECC-SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEecc-cccHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhC-CCcccccCcchhhcccccccccccccceeccC
Confidence            69999999 557877774   35699999999999999999999999 99999999999999999999999999998765


Q ss_pred             CC-CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhh-----------------
Q 018244          208 DG-RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL-----------------  268 (359)
Q Consensus       208 ~~-~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~-----------------  268 (359)
                      .. ....+|+.|+|||++.+. .++.++||||+||++|+|++|+.||................                 
T Consensus       173 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (346)
T d1cm8a_         173 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK  252 (346)
T ss_dssp             SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred             CccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhh
Confidence            44 456789999999998764 47899999999999999999999987643221111000000                 


Q ss_pred             -----ccc---cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHh
Q 018244          269 -----TDS---CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTL  313 (359)
Q Consensus       269 -----~~~---~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~--L~~~  313 (359)
                           ...   ..........++++.+|+.+||..||++|||+.|++++  ++.+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         253 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  307 (346)
T ss_dssp             HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             hhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcC
Confidence                 000   00001123456789999999999999999999999985  5444

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-50  Score=368.42  Aligned_cols=249  Identities=17%  Similarity=0.222  Sum_probs=194.5

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC-chHHHHHHHHHHHhcCCCcccccccceeeeCCc----ceE
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE----RLL  130 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----~~l  130 (359)
                      +.|++++.||+|+||+||+|.. .+|+.||||++..... ...+.+.+|+++|+.++||||+++++++.....    .++
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~   87 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY   87 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence            3589999999999999999984 5799999999976543 235678999999999999999999999876532    345


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCC-
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~-  209 (359)
                      +++|+.+|+|.+++..   ..+++..++.++.||+.||+|||++ ||+||||||+|||+++++.+||+|||+++..... 
T Consensus        88 l~~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~-~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~  163 (345)
T d1pmea_          88 LVTHLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH  163 (345)
T ss_dssp             EEEECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred             EEEeecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCcceEEECCCCCEEEcccCceeeccCCC
Confidence            5566778999999953   4699999999999999999999999 9999999999999999999999999999764332 


Q ss_pred             ------CCcCCCccccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccc-----------
Q 018244          210 ------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS-----------  271 (359)
Q Consensus       210 ------~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~-----------  271 (359)
                            ....||+.|+|||++.. ..++.++||||+||++|+|++|+.||..................+           
T Consensus       164 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (345)
T d1pmea_         164 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL  243 (345)
T ss_dssp             CBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred             ccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhh
Confidence                  34568899999999854 457889999999999999999999987653221111111000000           


Q ss_pred             --------c-ccCC-----CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          272 --------C-LEGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       272 --------~-~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                              . ....     .....+.++.+|+.+||+.||++|||+.+++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         244 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                    0 0000     012345689999999999999999999999975

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-50  Score=362.79  Aligned_cols=252  Identities=16%  Similarity=0.178  Sum_probs=196.2

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeee-------
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE-------  124 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------  124 (359)
                      ..+.|+++++||+|+||+||+|+. .+|+.||||++.....  .....+.+|+++|+.++||||+++++++..       
T Consensus         8 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~   87 (318)
T d3blha1           8 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR   87 (318)
T ss_dssp             BGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-------
T ss_pred             ccCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccc
Confidence            457899999999999999999995 5789999999865432  235678899999999999999999998855       


Q ss_pred             -CCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCc
Q 018244          125 -GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (359)
Q Consensus       125 -~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a  203 (359)
                       ....++||||+.++.+.....  ....+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++
T Consensus        88 ~~~~~~iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~-~ivHrDlKp~NILl~~~~~~kl~dfg~~  164 (318)
T d3blha1          88 CKGSIYLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLA  164 (318)
T ss_dssp             ---CEEEEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             cCceEEEEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccC-CEEecCcCchheeecCCCcEEeeeccee
Confidence             346899999998876654443  556789999999999999999999999 9999999999999999999999999999


Q ss_pred             ccCCCC--------CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccc--
Q 018244          204 KNSRDG--------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC--  272 (359)
Q Consensus       204 ~~~~~~--------~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~--  272 (359)
                      +.....        ....||+.|+|||++.+. .++.++|||||||++|||++|+.||....................  
T Consensus       165 ~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  244 (318)
T d3blha1         165 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE  244 (318)
T ss_dssp             EECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred             eecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChh
Confidence            765422        234689999999998865 589999999999999999999999875433222211111110000  


Q ss_pred             cc----------------C-CCC-------hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          273 LE----------------G-QFS-------SDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       273 ~~----------------~-~~~-------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                      ..                . ...       ...++++.+|+.+||+.||++|||++|++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         245 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             TSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence            00                0 000       0124578899999999999999999999964

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.3e-50  Score=365.52  Aligned_cols=251  Identities=21%  Similarity=0.217  Sum_probs=195.3

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccccccceeeeC------CcceE
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DERLL  130 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~l  130 (359)
                      +|+.++.||+|+||+||+|+. .+|+.||||++.....    ...+|+++|+.++||||++++++|...      .+++|
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            578888899999999999995 5689999999976532    234699999999999999999998543      34789


Q ss_pred             EEecCCCCCHhhhhh-cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC-CeEEeccCCcccCCC
Q 018244          131 VAEYMPNDTLAKHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRD  208 (359)
Q Consensus       131 v~e~~~~gsL~~~l~-~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~-~~kl~DFg~a~~~~~  208 (359)
                      ||||++++.+..+.. ......+++..+..++.||+.||+|||++ ||+||||||+|||++.++ .+||+|||+++....
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~-~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~  175 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR  175 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTTCCEEECCCTTCEECCT
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccCCCcceEEEecCCCceeEecccchhhccC
Confidence            999998764333321 12456799999999999999999999999 999999999999999765 899999999987654


Q ss_pred             C---CCcCCCccccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhh-----------c----
Q 018244          209 G---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL-----------T----  269 (359)
Q Consensus       209 ~---~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~-----------~----  269 (359)
                      .   ....||..|+|||.+.+. .++.++||||+||++|||++|+.||................           .    
T Consensus       176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~  255 (350)
T d1q5ka_         176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT  255 (350)
T ss_dssp             TSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---
T ss_pred             CcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchh
Confidence            3   345789999999988754 68999999999999999999999987653322211111000           0    


Q ss_pred             cc--------cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHHh
Q 018244          270 DS--------CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTL  313 (359)
Q Consensus       270 ~~--------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~--L~~~  313 (359)
                      ..        ..........++++.+|+.+||+.||++|||+.|++++  ++.+
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  309 (350)
T d1q5ka_         256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  309 (350)
T ss_dssp             CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             hccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence            00        00011123457789999999999999999999999975  4444

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-49  Score=353.73  Aligned_cols=250  Identities=17%  Similarity=0.171  Sum_probs=203.0

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeCCcceEEEe
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  133 (359)
                      .+|+++++||+|+||+||+|+. .++..||||+++....  .....+.+|+.+|+.++||||+++++++.+....++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            4789999999999999999995 5788999999975432  335678999999999999999999999999999999999


Q ss_pred             cCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCCCC---
Q 018244          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (359)
Q Consensus       134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~~~---  210 (359)
                      ++.+++|..++.  ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||.++......   
T Consensus        82 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH~~-~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~  158 (292)
T d1unla_          82 FCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY  158 (292)
T ss_dssp             CCSEEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCC
T ss_pred             eccccccccccc--cccccchhHHHHHHHHHHHHHHHhhcC-CEeeecccCcccccccCCceeeeecchhhcccCCCccc
Confidence            999998888775  566789999999999999999999999 99999999999999999999999999998765432   


Q ss_pred             -CcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchh-HHHhhhhhhhhc------------------
Q 018244          211 -SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNIQTLT------------------  269 (359)
Q Consensus       211 -~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~-~~~~~~~~~~~~------------------  269 (359)
                       ...++..|+|||.+.+.. ++.++|||||||++|||++|+.||..... ............                  
T Consensus       159 ~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (292)
T d1unla_         159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP  238 (292)
T ss_dssp             CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred             eeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccc
Confidence             335678899999988665 68999999999999999999988643321 111110000000                  


Q ss_pred             -----cccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          270 -----DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       270 -----~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                           ............++.+.+|+.+||+.||++|||++|++++
T Consensus       239 ~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H  283 (292)
T d1unla_         239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             cccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                 0000011223456789999999999999999999999864

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=2.8e-49  Score=359.48  Aligned_cols=246  Identities=17%  Similarity=0.195  Sum_probs=197.4

Q ss_pred             CCCcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-CcccccccceeeeC--CcceE
Q 018244           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEG--DERLL  130 (359)
Q Consensus        55 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~--~~~~l  130 (359)
                      +.++|++++.||+|+||+||+|+. .+|+.||||+++...   .+.+.+|+++|+.++ ||||+++++++...  ...++
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~  109 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL  109 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEE
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeE
Confidence            446799999999999999999995 578999999997543   567889999999995 99999999998754  46899


Q ss_pred             EEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCC-CeEEeccCCcccCCCC
Q 018244          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDG  209 (359)
Q Consensus       131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~-~~kl~DFg~a~~~~~~  209 (359)
                      ||||+.+++|..+.     +.+++..+..++.||+.||.|||++ ||+||||||+|||++.++ .+||+|||+++.....
T Consensus       110 v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~-gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~  183 (328)
T d3bqca1         110 VFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG  183 (328)
T ss_dssp             EEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCGGGCEECCTT
T ss_pred             EEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhc-ccccccccccceEEcCCCCeeeecccccceeccCC
Confidence            99999999987764     3599999999999999999999999 999999999999998655 5999999999876543


Q ss_pred             ---CCcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhh--------------------
Q 018244          210 ---RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI--------------------  265 (359)
Q Consensus       210 ---~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~--------------------  265 (359)
                         ....+|+.|+|||.+.+.. ++.++||||+||++|+|++|+.||.............                    
T Consensus       184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~  263 (328)
T d3bqca1         184 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL  263 (328)
T ss_dssp             CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCC
T ss_pred             CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhccccc
Confidence               3556899999999988654 7999999999999999999999886432111000000                    


Q ss_pred             ----hhhc--------cccccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          266 ----QTLT--------DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       266 ----~~~~--------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                          ....        ............++++.+||.+||..||++|||++|++++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H  319 (328)
T d3bqca1         264 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  319 (328)
T ss_dssp             CGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                0000        0000011123356789999999999999999999999873

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=8e-49  Score=350.47  Aligned_cols=258  Identities=15%  Similarity=0.127  Sum_probs=205.5

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCC-cccccccceeeeCCcceEEEecC
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN-RRLANLLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~  135 (359)
                      .|++++.||+|+||+||+|+. .+|+.||||++.....  ...+.+|++.++.++| +|++.+++++......++||||+
T Consensus         6 ~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~   83 (293)
T d1csna_           6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   83 (293)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence            578899999999999999995 4688999999865432  3456789999999975 89999999999999999999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCC-----CCCeEEeccCCcccCCCC-
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-----DVNPRLSCFGLMKNSRDG-  209 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~-----~~~~kl~DFg~a~~~~~~-  209 (359)
                       +++|.+++.. ....+++..+..++.|++.||+|||++ ||+||||||+|||++.     ++.+||+|||+|+..... 
T Consensus        84 -~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~-giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~  160 (293)
T d1csna_          84 -GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV  160 (293)
T ss_dssp             -CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred             -CCCHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHHC-CceeccCCccceeecCcccccCCceEEcccceeEEcccCc
Confidence             6799998865 456799999999999999999999999 9999999999999974     578999999999865322 


Q ss_pred             ----------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhh--hhhhhhccccccCCC
Q 018244          210 ----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD--RNIQTLTDSCLEGQF  277 (359)
Q Consensus       210 ----------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~  277 (359)
                                ....||+.|+|||++.+..++.++||||||+++|||+||..||..........  ...............
T Consensus       161 ~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l  240 (293)
T d1csna_         161 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL  240 (293)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHH
T ss_pred             cccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHh
Confidence                      23468999999999999999999999999999999999999986432211100  000000000000011


Q ss_pred             ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccCC
Q 018244          278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVS  320 (359)
Q Consensus       278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~  320 (359)
                      ....++++.+++..|++.+|++||+++.+.+.|+.+.+.....
T Consensus       241 ~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~~~~  283 (293)
T d1csna_         241 CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTT  283 (293)
T ss_dssp             TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred             cCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHcCCC
Confidence            1234567999999999999999999999999888876554443

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.8e-49  Score=353.98  Aligned_cols=258  Identities=15%  Similarity=0.119  Sum_probs=200.1

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCccccc-ccceeeeCCcceEEEecC
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLAN-LLGCCCEGDERLLVAEYM  135 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~-~~~~~~~~~~~~lv~e~~  135 (359)
                      .|++++.||+|+||+||+|.. .+|+.||||++.....  .+++.+|+++++.++|+|++. +.+++.+.+..++||||+
T Consensus         8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~   85 (299)
T d1ckia_           8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   85 (299)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc
Confidence            588999999999999999985 5688999999876432  235788999999998776555 455567778899999999


Q ss_pred             CCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeC---CCCCeEEeccCCcccCCCC---
Q 018244          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG---  209 (359)
Q Consensus       136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~---~~~~~kl~DFg~a~~~~~~---  209 (359)
                      . ++|.+.+.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++   .+..++|+|||+|+.....   
T Consensus        86 ~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~  162 (299)
T d1ckia_          86 G-PSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  162 (299)
T ss_dssp             C-CBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred             C-Cchhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence            5 467776654 556799999999999999999999999 999999999999985   4567999999999875432   


Q ss_pred             --------CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhh--hhccccccCCCCh
Q 018244          210 --------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ--TLTDSCLEGQFSS  279 (359)
Q Consensus       210 --------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  279 (359)
                              ....||+.|+|||.+.+..++.++|||||||++|||+||+.||..............  .............
T Consensus       163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (299)
T d1ckia_         163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK  242 (299)
T ss_dssp             CBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTT
T ss_pred             cceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhcc
Confidence                    234689999999999998999999999999999999999999865432221111000  0000000001123


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccCC
Q 018244          280 DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVS  320 (359)
Q Consensus       280 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~  320 (359)
                      .+++++.+++..||+.||++||++.++.+.|+.+.......
T Consensus       243 ~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~~~~  283 (299)
T d1ckia_         243 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS  283 (299)
T ss_dssp             TSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHTCC
T ss_pred             CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHcCCC
Confidence            45678999999999999999999999999998876544433

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-50  Score=362.66  Aligned_cols=248  Identities=17%  Similarity=0.206  Sum_probs=202.3

Q ss_pred             CCcccccccCCCCCCcEEEEEEe----CCCcEEEEEEeCCCCC----chHHHHHHHHHHHhcCCC-cccccccceeeeCC
Q 018244           56 FAMENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW----PDARQFLEEARAVGQLRN-RRLANLLGCCCEGD  126 (359)
Q Consensus        56 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~  126 (359)
                      .++|++++.||+|+||+||+|..    .+|+.||||.++....    ...+.+.+|+++|++++| |||+++++++.+..
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~  102 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  102 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence            46799999999999999999984    2478999999975421    224567889999999976 89999999999999


Q ss_pred             cceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccC
Q 018244          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (359)
Q Consensus       127 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~  206 (359)
                      ..+++|||+.+|+|.+++.  ....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus       103 ~~~~v~e~~~~~~L~~~i~--~~~~~~e~~~~~~~~Qi~~al~~lH~~-~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~  179 (322)
T d1vzoa_         103 KLHLILDYINGGELFTHLS--QRERFTEHEVQIYVGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEF  179 (322)
T ss_dssp             EEEEEECCCCSCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred             ceeeeeecccccHHHHHHH--hcccccHHHHHHHHHHHHHHHHHhhcC-CEEeccCCccceeecCCCCEEEeeccchhhh
Confidence            9999999999999999987  445678999999999999999999999 9999999999999999999999999999765


Q ss_pred             CCC-----CCcCCCccccCcccccCC--CCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhccccccCCCCh
Q 018244          207 RDG-----RSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS  279 (359)
Q Consensus       207 ~~~-----~~~~~t~~y~aPE~~~~~--~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (359)
                      ...     ....|++.|+|||.+.+.  .++.++|||||||+||+|++|..||..................  ....++.
T Consensus       180 ~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~--~~~~~~~  257 (322)
T d1vzoa_         180 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQ  257 (322)
T ss_dssp             CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCCT
T ss_pred             cccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhccc--CCCCCcc
Confidence            432     345678999999999765  3678999999999999999999998765332222111111111  1223455


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 018244          280 DEGTELVRLASRCLQYEPRERPN-----PRSLVT  308 (359)
Q Consensus       280 ~~~~~l~~li~~cl~~dp~~Rps-----~~~il~  308 (359)
                      ..++++.+|+.+||++||++|||     ++|+++
T Consensus       258 ~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         258 EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             cCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            67889999999999999999994     777765

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-49  Score=359.63  Aligned_cols=249  Identities=16%  Similarity=0.213  Sum_probs=196.3

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCc--hHHHHHHHHHHHhcCCCcccccccceeeeC-----Ccc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG-----DER  128 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~  128 (359)
                      .+|++++.||+|+||+||+|.. .+|+.||||++......  ..+.+.+|+++|+.++|||||++++++...     ...
T Consensus        18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~   97 (348)
T d2gfsa1          18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND   97 (348)
T ss_dssp             TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCC
T ss_pred             CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCce
Confidence            3689999999999999999994 57999999999865432  345688999999999999999999998643     334


Q ss_pred             eEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCCC
Q 018244          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (359)
Q Consensus       129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~~  208 (359)
                      +++++|+.+|+|.+++   ..+.+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+|++|||++.....
T Consensus        98 ~~i~~~~~gg~L~~~~---~~~~l~e~~~~~i~~qil~aL~~LH~~-giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~  173 (348)
T d2gfsa1          98 VYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD  173 (348)
T ss_dssp             CEEEEECCSEEHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCC----CCTG
T ss_pred             EEEEEeecCCchhhhc---ccccccHHHHHHHHHHHHHHHHHHHhC-CCcccccCCccccccccccccccccchhcccCc
Confidence            6777888899999998   445799999999999999999999999 999999999999999999999999999876543


Q ss_pred             C-CCcCCCccccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhcccc--------------
Q 018244          209 G-RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC--------------  272 (359)
Q Consensus       209 ~-~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~--------------  272 (359)
                      . ....||+.|+|||.+.+.. ++.++|||||||++|+|++|+.||....................              
T Consensus       174 ~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  253 (348)
T d2gfsa1         174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN  253 (348)
T ss_dssp             GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHH
T ss_pred             ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhh
Confidence            3 4556889999999877654 68899999999999999999999876533222211111100000              


Q ss_pred             -----cc-CC-----CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          273 -----LE-GQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       273 -----~~-~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                           .. ..     .....++++.+||.+||+.||++|||+.|++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H  301 (348)
T d2gfsa1         254 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  301 (348)
T ss_dssp             HHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence                 00 00     012346789999999999999999999999974

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-48  Score=356.34  Aligned_cols=247  Identities=16%  Similarity=0.199  Sum_probs=190.1

Q ss_pred             CcccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCC--chHHHHHHHHHHHhcCCCcccccccceeeeC------Cc
Q 018244           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG------DE  127 (359)
Q Consensus        57 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~  127 (359)
                      ..|++++.||+|+||+||+|.. .+|..||||++.....  .....+.+|+.+|+.++||||++++++|...      ..
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            4689999999999999999995 4699999999976543  2345688999999999999999999999643      57


Q ss_pred             ceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCCcccCC
Q 018244          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (359)
Q Consensus       128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~a~~~~  207 (359)
                      .|+||||+.++ +.+.+.    ..+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+|++|||+++...
T Consensus        97 ~~iv~Ey~~~~-l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~-giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~  170 (355)
T d2b1pa1          97 VYLVMELMDAN-LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  170 (355)
T ss_dssp             EEEEEECCSEE-HHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             eEEEEeccchH-HHHhhh----cCCCHHHHHHHHHHHHHHHHHhhhc-ccccccCCccccccccccceeeechhhhhccc
Confidence            89999999775 444442    3589999999999999999999999 99999999999999999999999999987655


Q ss_pred             CC---CCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhhhhhhhhc---------------
Q 018244          208 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT---------------  269 (359)
Q Consensus       208 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~---------------  269 (359)
                      ..   ....+|+.|+|||++.+..++.++||||+||++|+|++|+.||.................               
T Consensus       171 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (355)
T d2b1pa1         171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR  250 (355)
T ss_dssp             ----------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHH
T ss_pred             cccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHH
Confidence            43   345689999999999999999999999999999999999999875432221111100000               


Q ss_pred             ---cc---------------cccCC---CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          270 ---DS---------------CLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       270 ---~~---------------~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                         ..               .....   .....+.++.+|+.+||+.||++|||++|+|++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             HHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence               00               00000   012357889999999999999999999999975

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-42  Score=319.28  Aligned_cols=251  Identities=16%  Similarity=0.178  Sum_probs=190.0

Q ss_pred             cccccccCCCCCCcEEEEEEe-CCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-----------CcccccccceeeeC
Q 018244           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----------NRRLANLLGCCCEG  125 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~~~~~  125 (359)
                      +|+++++||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++++.+.           |+||+++++++...
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            489999999999999999995 579999999998643 22456788999888875           47899999887643


Q ss_pred             --CcceEEEecCCCC-CHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCC------eE
Q 018244          126 --DERLLVAEYMPND-TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN------PR  196 (359)
Q Consensus       126 --~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~------~k  196 (359)
                        ...+++++++..+ .............+++..+..++.||+.||.|||+..||+||||||+|||++.++.      ++
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~k  172 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIK  172 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEE
T ss_pred             cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceee
Confidence              4556666665443 34444444466788999999999999999999998339999999999999986553      99


Q ss_pred             EeccCCcccCCC-CCCcCCCccccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCcchhHHHhh------hhh----
Q 018244          197 LSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD------RNI----  265 (359)
Q Consensus       197 l~DFg~a~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~elltg~~p~~~~~~~~~~~------~~~----  265 (359)
                      ++|||.+..... .....||+.|+|||++.+..++.++||||+||++++|++|+.||..........      ...    
T Consensus       173 l~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg  252 (362)
T d1q8ya_         173 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG  252 (362)
T ss_dssp             ECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHC
T ss_pred             EeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhC
Confidence            999999886543 345678999999999999999999999999999999999999875431110000      000    


Q ss_pred             -------------hhhcc---------c----------cccCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 018244          266 -------------QTLTD---------S----------CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA  309 (359)
Q Consensus       266 -------------~~~~~---------~----------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~  309 (359)
                                   .....         .          ..........++++.+|+.+||+.||.+|||++|+|++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H  328 (362)
T d1q8ya_         253 ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  328 (362)
T ss_dssp             SCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             CCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                         00000         0          00112345678899999999999999999999999874

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.92  E-value=6.6e-26  Score=188.46  Aligned_cols=162  Identities=15%  Similarity=0.099  Sum_probs=118.9

Q ss_pred             ccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCc------------------hHHHHHHHHHHHhcCCCccccccccee
Q 018244           61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP------------------DARQFLEEARAVGQLRNRRLANLLGCC  122 (359)
Q Consensus        61 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~e~~~l~~l~h~niv~~~~~~  122 (359)
                      +-+.||+|+||+||+|+..+|+.||||++......                  ......+|...+..+.|.+++..+++.
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            44568999999999999888999999987632110                  012345688999999999998877653


Q ss_pred             eeCCcceEEEecCCCCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccCCCCCeeeCCCCCeEEeccCC
Q 018244          123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (359)
Q Consensus       123 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ivH~Dikp~NIll~~~~~~kl~DFg~  202 (359)
                          ..+++|||++++.+.+         ++......++.|++.||.|||++ |++||||||+|||++++ .++|+|||+
T Consensus        84 ----~~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~-giiHrDiKP~NILv~~~-~~~liDFG~  148 (191)
T d1zara2          84 ----GNAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHR-GIVHGDLSQYNVLVSEE-GIWIIDFPQ  148 (191)
T ss_dssp             ----TTEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEEETT-EEEECCCTT
T ss_pred             ----CCEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhC-CEEEccCChhheeeeCC-CEEEEECCC
Confidence                3479999998865543         23344567899999999999999 99999999999999965 489999999


Q ss_pred             cccCCCCCCcCCCccccCc------ccccCCCCCCccchhhHHHHH
Q 018244          203 MKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFGTLL  242 (359)
Q Consensus       203 a~~~~~~~~~~~t~~y~aP------E~~~~~~~~~~~Di~slG~il  242 (359)
                      |.........    .|...      +.+ ...|+.++|+||..--+
T Consensus       149 a~~~~~~~~~----~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         149 SVEVGEEGWR----EILERDVRNIITYF-SRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             CEETTSTTHH----HHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHH
T ss_pred             cccCCCCCcH----HHHHHHHHHHHHHH-cCCCCCcccHHHHHHHH
Confidence            8765433211    11111      111 25688899999976443

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.70  E-value=2.4e-08  Score=85.01  Aligned_cols=139  Identities=14%  Similarity=-0.002  Sum_probs=93.1

Q ss_pred             cccccccCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEEEecCC
Q 018244           58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMP  136 (359)
Q Consensus        58 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~  136 (359)
                      .++.++..+.++.+.||+...++ ..+.+|+...........+.+|...+..+. +--+.+++.+...++..++||++++
T Consensus        15 ~~~~~~~~~G~s~~~v~rv~~~~-~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~   93 (263)
T d1j7la_          15 KYRCVKDTEGMSPAKVYKLVGEN-ENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD   93 (263)
T ss_dssp             TSEEEECSCCCSSSEEEEEECSS-CEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred             ceEEEEcCCCCCCCcEEEEEeCC-CeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecc
Confidence            33455544445567899987544 467788887554333445677888887774 4346777888888888999999999


Q ss_pred             CCCHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhhcC------------------------------------------
Q 018244          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK------------------------------------------  174 (359)
Q Consensus       137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~------------------------------------------  174 (359)
                      |.++.+....  .  ..   ...++.+++..++.||+.                                          
T Consensus        94 G~~~~~~~~~--~--~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (263)
T d1j7la_          94 GVLCSEEYED--E--QS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD  166 (263)
T ss_dssp             SEEHHHHTTT--C--SC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSS
T ss_pred             cccccccccc--c--cc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchH
Confidence            9887665421  0  11   222344444445555421                                          


Q ss_pred             ----------------CCcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          175 ----------------ERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       175 ----------------~~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                                      ..++|+|+.|.||++++++.+-|+||+.+.
T Consensus       167 ~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         167 PRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             HHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence                            126899999999999977667799999864

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.15  E-value=8.2e-06  Score=73.26  Aligned_cols=76  Identities=13%  Similarity=0.135  Sum_probs=48.5

Q ss_pred             cccCCCCCCcEEEEEEeC-CCcEEEEEEeCC------CCC-chHHHHHHHHHHHhcCC-C--cccccccceeeeCCcceE
Q 018244           62 VSEHGEKAPNVVYKGKLE-NQFRIAVKRFNR------SAW-PDARQFLEEARAVGQLR-N--RRLANLLGCCCEGDERLL  130 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~------~~~-~~~~~~~~e~~~l~~l~-h--~niv~~~~~~~~~~~~~l  130 (359)
                      .+.+|.|....||+.... ++..+.||.-..      ... ....+...|...|+.+. +  ..+++++.  .+++..++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFY--SDTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEE--EETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEE--EcCCCCEE
Confidence            457899999999999854 467899997542      111 12334566888887662 2  23445543  35667889


Q ss_pred             EEecCCCCC
Q 018244          131 VAEYMPNDT  139 (359)
Q Consensus       131 v~e~~~~gs  139 (359)
                      |||++.+..
T Consensus       109 vmE~L~~~~  117 (392)
T d2pula1         109 VMEDLSHLK  117 (392)
T ss_dssp             EECCCTTSE
T ss_pred             EEeccCCcc
Confidence            999997643

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.14  E-value=1.3e-05  Score=67.02  Aligned_cols=69  Identities=19%  Similarity=0.181  Sum_probs=50.3

Q ss_pred             CcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCC--cccccccceeeeCCcceEEEecCCCCCHh
Q 018244           70 PNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN--RRLANLLGCCCEGDERLLVAEYMPNDTLA  141 (359)
Q Consensus        70 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~gsL~  141 (359)
                      .+.||+...+++..+.+|........   .+..|...|+.+..  -.+.+++.+..+++..++||++++|.++.
T Consensus        24 ~~~v~r~~~~~~~~~vlK~~~~~~~~---~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~   94 (255)
T d1nd4a_          24 DAAVFRLSAQGRPVLFVKTDLSGALN---ELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL   94 (255)
T ss_dssp             SCEEEEEECTTSCCEEEEEECSCTTS---CHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             CCeEEEEEeCCCCEEEEEeCCccCHh---HHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence            36799999888888899987654432   35667777776632  33566777777888899999999886553

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.69  E-value=8.1e-05  Score=64.73  Aligned_cols=68  Identities=25%  Similarity=0.234  Sum_probs=46.1

Q ss_pred             CcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCcccc-----cc--cceeeeCCcceEEEecCCCC
Q 018244           70 PNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLA-----NL--LGCCCEGDERLLVAEYMPND  138 (359)
Q Consensus        70 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv-----~~--~~~~~~~~~~~lv~e~~~~g  138 (359)
                      -..||+++..+|..+++|+...... ..+++..|...+..|...++.     ..  -..+......+.++++++|.
T Consensus        35 EN~vy~v~~~dg~~~VlK~~rp~~~-s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~  109 (325)
T d1zyla1          35 ENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGR  109 (325)
T ss_dssp             SSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred             cceeEEEEcCCCCEEEEEEeCCCCC-CHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCc
Confidence            3689999998999999999875543 356677888888887533221     11  11223455678889998763

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.17  E-value=0.00061  Score=60.67  Aligned_cols=73  Identities=15%  Similarity=0.251  Sum_probs=48.9

Q ss_pred             cccCCCCCCcEEEEEEeCC--------CcEEEEEEeCCCCCchHHHHHHHHHHHhcCC-CcccccccceeeeCCcceEEE
Q 018244           62 VSEHGEKAPNVVYKGKLEN--------QFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA  132 (359)
Q Consensus        62 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~  132 (359)
                      ++.|+.|-...+|++...+        ...|.+++.-. . .......+|..+++.+. +.-..++++++.    -.+|+
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~-~-~~~idr~~E~~i~~~ls~~gl~Pkll~~~~----~g~I~  120 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN-P-ETESHLVAESVIFTLLSERHLGPKLYGIFS----GGRLE  120 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS-C-CCHHHHHHHHHHHHHHHHTTSSSCEEEEET----TEEEE
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC-c-chhhHHHHHHHHHHHHHhCCCCCeEEEEcC----CceEE
Confidence            4567888889999998654        34577776653 2 22334567888888885 433446676663    36899


Q ss_pred             ecCCCCCH
Q 018244          133 EYMPNDTL  140 (359)
Q Consensus       133 e~~~~gsL  140 (359)
                      ||++|.+|
T Consensus       121 efi~g~~l  128 (395)
T d1nw1a_         121 EYIPSRPL  128 (395)
T ss_dssp             CCCCEEEC
T ss_pred             EEeccccC
Confidence            99987544

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.10  E-value=0.00048  Score=59.26  Aligned_cols=158  Identities=12%  Similarity=0.057  Sum_probs=81.4

Q ss_pred             cCHHHHHHHhcCCCcccccc--cCCCCCCcEEEEEEeCCCcEEEEEEeCCCCCchHHHHHHHHHHHhcCCCccc-----c
Q 018244           44 YSIETLRTATSGFAMENIVS--EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-----A  116 (359)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~--~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----v  116 (359)
                      .+.+++...-..|.--.+.+  .+..|--.+.|+.+..+| .+++|++....  ..+.+..|++++..|...++     +
T Consensus         3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g-~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi   79 (316)
T d2ppqa1           3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL   79 (316)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred             CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCC-cEEEEEcCCCC--CHHHHHHHHHHHHhhhhccccccccc
Confidence            45677777777665433333  345676788999998776 48999986532  12344556666666643222     1


Q ss_pred             ccc-c--eeeeCCcceEEEecCCCCCHhh--------------hhhc----CC---CCCCC------------------H
Q 018244          117 NLL-G--CCCEGDERLLVAEYMPNDTLAK--------------HLFH----WE---TQPMK------------------W  154 (359)
Q Consensus       117 ~~~-~--~~~~~~~~~lv~e~~~~gsL~~--------------~l~~----~~---~~~l~------------------~  154 (359)
                      ... |  +.........++.++.+.....              .++.    ..   .....                  .
T Consensus        80 ~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (316)
T d2ppqa1          80 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE  159 (316)
T ss_dssp             CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred             eecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcc
Confidence            111 1  1112334455666665532111              0000    00   00000                  0


Q ss_pred             HHHHHHHHHHHHHHHHhhcC---CCcccccCCCCCeeeCCCCCeEEeccCCcc
Q 018244          155 AMRLRVALHIAEALEYCTSK---ERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (359)
Q Consensus       155 ~~~~~i~~qi~~~L~~LH~~---~~ivH~Dikp~NIll~~~~~~kl~DFg~a~  204 (359)
                      ......+......+.-.+..   .|+||+|+.++||+++++...-|+||+.+.
T Consensus       160 ~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         160 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccc
Confidence            01112222222333332221   379999999999999988777899999864