Citrus Sinensis ID: 018245

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
MALKAMRVLVVMALVAALMQLSQALGIAQFRRIAAQNNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDAVNKPKKYGFTETAKGCCGTGTVEFGDTCRGLTTCTDAGKYIFWDAVHPTQKMYQIIARQGLESLDVNALF
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccEEEEEEccHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHccccccccccccccccccccccccccccccccccccccEEcccccHHHHHHHHHHHHHHccccccccc
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEccccEcccccccccEEEEccccccccccccccccccccccccHHHHHHHHccccccccccccccccHHHcccccEEcccccccccccHHHHccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcEEEEEEcccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHcHHHcccEEEcccccccccEEEEEEccccccccccccEEEEcccccHHHHHHHHHHHHHccccccccc
MALKAMRVLVVMALVAALMQLSQALGIAQFRRIAAQNNVTFMLVFgdssvdpgnnnrlatttkgnflpygknffngrptgrftdgrlatDFIAEsfgftnaipafldptikkidllhgvsfasagsgyddlTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMgtndflqnyyleptrsrqYTVEQYENYLVSSMFEDIKAMKSLGATRLvvvgvpplgcmpivktlqdQTACVESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDAvnkpkkygftetakgccgtgtvefgdtcrglttctdagkyifwdavhptQKMYQIIARQglesldvnalf
MALKAMRVLVVMALVAALMQLSQALGIAQFRRIAAQNNVTFMLVFGDSSVDPGNNNRLAtttkgnflpygKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDAVNKPKKYGFTETAKGCCGTGTVEFGDTCRGLTTCTDAGKYIFWDAVHPTQKMYQIIARQglesldvnalf
malkamrvlvvmalvaalmqlsqalGIAQFRRIAAQNNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDAVNKPKKYGFTETAKGCCGTGTVEFGDTCRGLTTCTDAGKYIFWDAVHPTQKMYQIIARQGLESLDVNALF
****AMRVLVVMALVAALMQLSQALGIAQFRRIAAQNNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDAVNKPKKYGFTETAKGCCGTGTVEFGDTCRGLTTCTDAGKYIFWDAVHPTQKMYQIIARQGLE********
*********VVMALVAALMQLSQALGIAQFRRIAAQNNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLG**VG*KKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDAVNKPKKYGFTETAKGCCGTGTVEFGDTCRGLTTCTDAGKYIFWDAVHPTQKMYQIIARQGLESLDV****
MALKAMRVLVVMALVAALMQLSQALGIAQFRRIAAQNNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDAVNKPKKYGFTETAKGCCGTGTVEFGDTCRGLTTCTDAGKYIFWDAVHPTQKMYQIIARQGLESLDVNALF
*ALKAMRVLVVMALVAALMQLSQALGIAQFRRIAAQNNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDAVNKPKKYGFTETAKGCCGTGTVEFGDTCRGLTTCTDAGKYIFWDAVHPTQKMYQIIARQGLESLD*****
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MALKAMRVLVVMALVAALMQLSQALGIAQFRRIAAQNNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDAVNKPKKYGFTETAKGCCGTGTVEFGDTCRGLTTCTDAGKYIFWDAVHPTQKMYQIIARQGLESLDVNALF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query359 2.2.26 [Sep-21-2011]
Q9FJ41357 GDSL esterase/lipase At5g yes no 0.958 0.963 0.538 1e-112
Q8VY93351 GDSL esterase/lipase At4g no no 0.863 0.883 0.425 2e-77
Q67ZI9350 GDSL esterase/lipase At2g no no 0.869 0.891 0.422 2e-76
Q9SJB4350 GDSL esterase/lipase At2g no no 0.891 0.914 0.413 3e-73
Q9FJ40375 GDSL esterase/lipase At5g no no 0.855 0.818 0.405 2e-71
Q94CH6364 GDSL esterase/lipase EXL3 no no 0.844 0.832 0.427 3e-70
Q9LMJ3360 GDSL esterase/lipase At1g no no 0.966 0.963 0.365 7e-69
Q9LU14353 GDSL esterase/lipase APG no no 0.857 0.872 0.420 1e-67
Q9LH73351 GDSL esterase/lipase At3g no no 0.894 0.914 0.400 3e-67
Q9FFN0353 GDSL esterase/lipase At5g no no 0.863 0.878 0.408 2e-66
>sp|Q9FJ41|GDL85_ARATH GDSL esterase/lipase At5g45950 OS=Arabidopsis thaliana GN=At5g45950 PE=2 SV=1 Back     alignment and function desciption
 Score =  405 bits (1041), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 187/347 (53%), Positives = 249/347 (71%), Gaps = 3/347 (0%)

Query: 9   LVVMALVAALMQLSQ--ALGIAQFRRIAAQNNVTFMLVFGDSSVDPGNNNRLATTTKGNF 66
            V + +  AL  L    +L +   R++AA++NVT +LVFGDSSVDPGNNN + T  KGNF
Sbjct: 6   FVTLLVAVALQPLPSVLSLDVHLLRQLAAKHNVTSILVFGDSSVDPGNNNFIKTEMKGNF 65

Query: 67  LPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGS 126
            PYG+NF N +PTGR  DG LA D+IAE+ G+   IPAFLDP++ + DL  G SFASAGS
Sbjct: 66  PPYGENFINHKPTGRLCDGLLAPDYIAEAMGYP-PIPAFLDPSLTQADLTRGASFASAGS 124

Query: 127 GYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNY 186
           GYDDLTAN+S+V S + Q  Y  HYKIHL  LVG  ++ ++I N+IFL+SMG+NDFLQNY
Sbjct: 125 GYDDLTANISNVWSFTTQANYFLHYKIHLTKLVGPLESAKMINNAIFLMSMGSNDFLQNY 184

Query: 187 YLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTA 246
            ++ TR +Q+TVEQY  +L   M  D K +  LGA RLVVVGVPP+GCMP++K L+ Q  
Sbjct: 185 LVDFTRQKQFTVEQYIEFLSHRMLYDAKMLHRLGAKRLVVVGVPPMGCMPLIKYLRGQKT 244

Query: 247 CVESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDAVNKPKKYGFTETAKGCC 306
           CV+  N++A S N+KI + L +L+  IG+K  Y+D Y  I +A+  P+K+GF E + GCC
Sbjct: 245 CVDQLNQIAFSFNAKIIKNLELLQSKIGLKTIYVDAYSTIQEAIKNPRKFGFVEASLGCC 304

Query: 307 GTGTVEFGDTCRGLTTCTDAGKYIFWDAVHPTQKMYQIIARQGLESL 353
           GTGT E+G+TC+ +  C D  KY+FWDAVHPTQ+MYQII ++ + S+
Sbjct: 305 GTGTYEYGETCKDMQVCKDPTKYVFWDAVHPTQRMYQIIVKKAIASI 351

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q8VY93|GDL66_ARATH GDSL esterase/lipase At4g26790 OS=Arabidopsis thaliana GN=At4g26790 PE=2 SV=1 Back     alignment and function description
>sp|Q67ZI9|GDL48_ARATH GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana GN=At2g42990 PE=2 SV=1 Back     alignment and function description
>sp|Q9SJB4|GDL34_ARATH GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana GN=At2g04570 PE=2 SV=1 Back     alignment and function description
>sp|Q9FJ40|GDL86_ARATH GDSL esterase/lipase At5g45960 OS=Arabidopsis thaliana GN=At5g45960 PE=2 SV=1 Back     alignment and function description
>sp|Q94CH6|EXL3_ARATH GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1 Back     alignment and function description
>sp|Q9LMJ3|GDL1_ARATH GDSL esterase/lipase At1g06990 OS=Arabidopsis thaliana GN=At1g06990 PE=2 SV=2 Back     alignment and function description
>sp|Q9LU14|APG2_ARATH GDSL esterase/lipase APG OS=Arabidopsis thaliana GN=APG PE=1 SV=1 Back     alignment and function description
>sp|Q9LH73|GDL52_ARATH GDSL esterase/lipase At3g14820 OS=Arabidopsis thaliana GN=At3g14820 PE=3 SV=2 Back     alignment and function description
>sp|Q9FFN0|GDL72_ARATH GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana GN=At5g03810 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query359
224077024358 predicted protein [Populus trichocarpa] 0.966 0.969 0.697 1e-145
225443543359 PREDICTED: GDSL esterase/lipase At5g4595 1.0 1.0 0.657 1e-143
359483506351 PREDICTED: GDSL esterase/lipase At5g4595 0.977 1.0 0.646 1e-138
255563032335 zinc finger protein, putative [Ricinus c 0.877 0.940 0.644 1e-129
297740457298 unnamed protein product [Vitis vinifera] 0.827 0.996 0.690 1e-125
449434308373 PREDICTED: GDSL esterase/lipase At5g4595 0.930 0.895 0.597 1e-116
356546609363 PREDICTED: GDSL esterase/lipase At5g4595 0.913 0.903 0.579 1e-116
363807640356 uncharacterized protein LOC100812614 pre 0.938 0.946 0.568 1e-114
297794661357 GDSL-motif lipase/hydrolase family prote 0.958 0.963 0.547 1e-111
15237350357 GDSL esterase/lipase [Arabidopsis thalia 0.958 0.963 0.538 1e-110
>gi|224077024|ref|XP_002305097.1| predicted protein [Populus trichocarpa] gi|222848061|gb|EEE85608.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 242/347 (69%), Positives = 293/347 (84%)

Query: 8   VLVVMALVAALMQLSQALGIAQFRRIAAQNNVTFMLVFGDSSVDPGNNNRLATTTKGNFL 67
           ++ V+AL+A +   S A+ I Q R++ A++NVT +LVFGDSSVDPGNNNRL TT KGNF 
Sbjct: 7   MVTVLALMALMPLFSGAVDIRQLRQLTAKHNVTCVLVFGDSSVDPGNNNRLPTTVKGNFP 66

Query: 68  PYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSG 127
           PYGK+FF+ RPTGRF++GRLATDFIAE+ G+T  IPAFLDP +K  DLLHGVSFASA SG
Sbjct: 67  PYGKDFFDRRPTGRFSNGRLATDFIAEAIGYTKIIPAFLDPNLKPTDLLHGVSFASAASG 126

Query: 128 YDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYY 187
           YDDLTANLS VL VS+QLEYLKHYK+HL  LVGVKKA+ I+ N+IFLLSMGTNDFLQNYY
Sbjct: 127 YDDLTANLSQVLPVSKQLEYLKHYKLHLSRLVGVKKAQNIVNNAIFLLSMGTNDFLQNYY 186

Query: 188 LEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTAC 247
           LEP R +Q+ VEQY+N+L S MFEDIK M  LGATR+VVVGVPPLGCMP+V+TL  Q  C
Sbjct: 187 LEPNRPKQFNVEQYQNFLASRMFEDIKEMNRLGATRVVVVGVPPLGCMPLVRTLAGQNTC 246

Query: 248 VESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDAVNKPKKYGFTETAKGCCG 307
           VESYN+VA SLN+KI+EKLAIL++TIGIK AY+DCY +I +A+N PKK+G  ET+KGCCG
Sbjct: 247 VESYNQVAWSLNAKIKEKLAILKKTIGIKDAYVDCYGVIQNAINTPKKFGLVETSKGCCG 306

Query: 308 TGTVEFGDTCRGLTTCTDAGKYIFWDAVHPTQKMYQIIARQGLESLD 354
           +GT+E+GDTC+G+TTC D  KY FWDAVHPT+KMY+I+A + + SLD
Sbjct: 307 SGTIEYGDTCKGMTTCADPSKYAFWDAVHPTEKMYRILADEAIASLD 353

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225443543|ref|XP_002277279.1| PREDICTED: GDSL esterase/lipase At5g45950-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359483506|ref|XP_003632969.1| PREDICTED: GDSL esterase/lipase At5g45950-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255563032|ref|XP_002522520.1| zinc finger protein, putative [Ricinus communis] gi|223538211|gb|EEF39820.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297740457|emb|CBI30639.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449434308|ref|XP_004134938.1| PREDICTED: GDSL esterase/lipase At5g45950-like [Cucumis sativus] gi|449479555|ref|XP_004155634.1| PREDICTED: GDSL esterase/lipase At5g45950-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356546609|ref|XP_003541717.1| PREDICTED: GDSL esterase/lipase At5g45950-like [Glycine max] Back     alignment and taxonomy information
>gi|363807640|ref|NP_001242159.1| uncharacterized protein LOC100812614 precursor [Glycine max] gi|255639705|gb|ACU20146.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|297794661|ref|XP_002865215.1| GDSL-motif lipase/hydrolase family protein [Arabidopsis lyrata subsp. lyrata] gi|297311050|gb|EFH41474.1| GDSL-motif lipase/hydrolase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15237350|ref|NP_199407.1| GDSL esterase/lipase [Arabidopsis thaliana] gi|75170952|sp|Q9FJ41.1|GDL85_ARATH RecName: Full=GDSL esterase/lipase At5g45950; AltName: Full=Extracellular lipase At5g45950; Flags: Precursor gi|9758942|dbj|BAB09323.1| GDSL-motif lipase/hydrolase-like protein [Arabidopsis thaliana] gi|332007936|gb|AED95319.1| GDSL esterase/lipase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query359
TAIR|locus:2152425357 AT5G45950 "AT5G45950" [Arabido 0.896 0.901 0.563 1.3e-100
TAIR|locus:2116282351 AT4G26790 "AT4G26790" [Arabido 0.863 0.883 0.425 2.5e-72
TAIR|locus:2045610350 AT2G42990 "AT2G42990" [Arabido 0.849 0.871 0.429 1.3e-70
TAIR|locus:2058309350 AT2G04570 "AT2G04570" [Arabido 0.891 0.914 0.413 7.2e-68
TAIR|locus:2204324364 AT1G75900 "AT1G75900" [Arabido 0.844 0.832 0.427 6.5e-67
TAIR|locus:2152435375 AT5G45960 "AT5G45960" [Arabido 0.855 0.818 0.405 8.2e-67
TAIR|locus:2007402360 AT1G06990 "AT1G06990" [Arabido 0.869 0.866 0.383 1.4e-64
TAIR|locus:2094902353 AT3G16370 "AT3G16370" [Arabido 0.857 0.872 0.423 1.4e-64
TAIR|locus:2099387351 AT3G14820 "AT3G14820" [Arabido 0.888 0.908 0.4 2.6e-63
TAIR|locus:2165810369 AT5G42170 "AT5G42170" [Arabido 0.849 0.826 0.434 2.6e-63
TAIR|locus:2152425 AT5G45950 "AT5G45950" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 998 (356.4 bits), Expect = 1.3e-100, P = 1.3e-100
 Identities = 182/323 (56%), Positives = 240/323 (74%)

Query:    31 RRIAAQNNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATD 90
             R++AA++NVT +LVFGDSSVDPGNNN + T  KGNF PYG+NF N +PTGR  DG LA D
Sbjct:    30 RQLAAKHNVTSILVFGDSSVDPGNNNFIKTEMKGNFPPYGENFINHKPTGRLCDGLLAPD 89

Query:    91 FIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKH 150
             +IAE+ G+   IPAFLDP++ + DL  G SFASAGSGYDDLTAN+S+V S + Q  Y  H
Sbjct:    90 YIAEAMGYP-PIPAFLDPSLTQADLTRGASFASAGSGYDDLTANISNVWSFTTQANYFLH 148

Query:   151 YKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMF 210
             YKIHL  LVG  ++ ++I N+IFL+SMG+NDFLQNY ++ TR +Q+TVEQY  +L   M 
Sbjct:   149 YKIHLTKLVGPLESAKMINNAIFLMSMGSNDFLQNYLVDFTRQKQFTVEQYIEFLSHRML 208

Query:   211 EDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILR 270
              D K +  LGA RLVVVGVPP+GCMP++K L+ Q  CV+  N++A S N+KI + L +L+
Sbjct:   209 YDAKMLHRLGAKRLVVVGVPPMGCMPLIKYLRGQKTCVDQLNQIAFSFNAKIIKNLELLQ 268

Query:   271 RTIGIKAAYIDCYDIILDAVNKPKKYGFTETAKGCCGTGTVEFGDTCRGLTTCTDAGKYI 330
               IG+K  Y+D Y  I +A+  P+K+GF E + GCCGTGT E+G+TC+ +  C D  KY+
Sbjct:   269 SKIGLKTIYVDAYSTIQEAIKNPRKFGFVEASLGCCGTGTYEYGETCKDMQVCKDPTKYV 328

Query:   331 FWDAVHPTQKMYQIIARQGLESL 353
             FWDAVHPTQ+MYQII ++ + S+
Sbjct:   329 FWDAVHPTQRMYQIIVKKAIASI 351
GO:0004091 "carboxylesterase activity" evidence=ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA
GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA
GO:0042335 "cuticle development" evidence=RCA
TAIR|locus:2116282 AT4G26790 "AT4G26790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045610 AT2G42990 "AT2G42990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2058309 AT2G04570 "AT2G04570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2204324 AT1G75900 "AT1G75900" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152435 AT5G45960 "AT5G45960" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007402 AT1G06990 "AT1G06990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2094902 AT3G16370 "AT3G16370" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2099387 AT3G14820 "AT3G14820" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165810 AT5G42170 "AT5G42170" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FJ41GDL85_ARATH3, ., 1, ., 1, ., -0.53890.95820.9635yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.10.691
3rd Layer3.1.1.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query359
cd01837315 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase 1e-130
PLN03156351 PLN03156, PLN03156, GDSL esterase/lipase; Provisio 1e-123
cd01846270 cd01846, fatty_acyltransferase_like, Fatty acyltra 3e-36
COG3240370 COG3240, COG3240, Phospholipase/lecithinase/hemoly 3e-20
pfam00657219 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydro 4e-13
cd01847281 cd01847, Triacylglycerol_lipase_like, Triacylglyce 6e-09
>gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information 
 Score =  375 bits (964), Expect = e-130
 Identities = 151/312 (48%), Positives = 192/312 (61%), Gaps = 9/312 (2%)

Query: 42  MLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNA 101
           + VFGDS VD GNNN L T  K NF PYG +F  GRPTGRF++GRL  DFIAE+ G    
Sbjct: 3   LFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFP-GRPTGRFSNGRLIIDFIAEALGLPLL 61

Query: 102 IPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGV 161
            P +L P     D L GV+FAS G+G  D T  L SV+S+S QLEY K YK  L  LVG 
Sbjct: 62  PPPYLSPNGSS-DFLTGVNFASGGAGILDSTGFLGSVISLSVQLEYFKEYKERLRALVGE 120

Query: 162 KKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGA 221
           + A +I+  S+FL+S+G+ND+L NY+     +RQY VE Y  +LVS++   IK +  LGA
Sbjct: 121 EAAADILSKSLFLISIGSNDYLNNYF--ANPTRQYEVEAYVPFLVSNISSAIKRLYDLGA 178

Query: 222 TRLVVVGVPPLGCMPIVKTLQ--DQTACVESYNKVAASLNSKIREKLAILRRT-IGIKAA 278
            + VV G+ PLGC+P  +TL   D   C+E  N++A   N+K+++ LA LRR   G K  
Sbjct: 179 RKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPGAKFV 238

Query: 279 YIDCYDIILDAVNKPKKYGFTETAKGCCGTGTVEFGDTCRGL--TTCTDAGKYIFWDAVH 336
           Y D Y+ +LD +  P KYGF  T K CCGTG  E G  C     T C D  KY+FWD VH
Sbjct: 239 YADIYNALLDLIQNPAKYGFENTLKACCGTGGPEGGLLCNPCGSTVCPDPSKYVFWDGVH 298

Query: 337 PTQKMYQIIARQ 348
           PT+   +IIA  
Sbjct: 299 PTEAANRIIADA 310

The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315
>gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional Back     alignment and domain information
>gnl|CDD|238882 cd01846, fatty_acyltransferase_like, Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|225780 COG3240, COG3240, Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|216048 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydrolase Back     alignment and domain information
>gnl|CDD|238883 cd01847, Triacylglycerol_lipase_like, Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 359
PLN03156351 GDSL esterase/lipase; Provisional 100.0
cd01837315 SGNH_plant_lipase_like SGNH_plant_lipase_like, a p 100.0
cd01847281 Triacylglycerol_lipase_like Triacylglycerol lipase 100.0
PRK15381408 pathogenicity island 2 effector protein SseJ; Prov 100.0
cd01846270 fatty_acyltransferase_like Fatty acyltransferase-l 100.0
COG3240370 Phospholipase/lecithinase/hemolysin [Lipid metabol 100.0
PF00657234 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter 99.94
cd01839208 SGNH_arylesterase_like SGNH_hydrolase subfamily, s 99.41
cd01832185 SGNH_hydrolase_like_1 Members of the SGNH-hydrolas 99.38
cd01836191 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee 99.34
cd01823259 SEST_like SEST_like. A family of secreted SGNH-hyd 99.33
cd04501183 SGNH_hydrolase_like_4 Members of the SGNH-hydrolas 99.32
cd01844177 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG 99.32
cd01824288 Phospholipase_B_like Phospholipase-B_like. This su 99.31
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 99.3
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 99.3
cd01830204 XynE_like SGNH_hydrolase subfamily, similar to the 99.29
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 99.28
cd04506204 SGNH_hydrolase_YpmR_like Members of the SGNH-hydro 99.26
PRK10528191 multifunctional acyl-CoA thioesterase I and protea 99.26
cd01825189 SGNH_hydrolase_peri1 SGNH_peri1; putative periplas 99.18
cd01821198 Rhamnogalacturan_acetylesterase_like Rhamnogalactu 99.18
PF13472179 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase fami 99.18
cd01835193 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG 99.14
cd01822177 Lysophospholipase_L1_like Lysophospholipase L1-lik 99.13
cd01831169 Endoglucanase_E_like Endoglucanase E-like members 99.03
cd01841174 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa 98.88
cd01833157 XynB_like SGNH_hydrolase subfamily, similar to Rum 98.87
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 98.82
cd00229187 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, 98.8
cd01828169 sialate_O-acetylesterase_like2 sialate_O-acetylest 98.77
cd01820214 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A 98.73
cd04502171 SGNH_hydrolase_like_7 Members of the SGNH-hydrolas 98.72
cd01826305 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase l 98.39
PF14606178 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase fami 98.38
COG2755216 TesA Lysophospholipase L1 and related esterases [A 98.28
cd01840150 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SG 98.25
KOG3670397 consensus Phospholipase [Lipid transport and metab 98.24
KOG3035245 consensus Isoamyl acetate-hydrolyzing esterase [Li 98.11
COG2845354 Uncharacterized protein conserved in bacteria [Fun 96.39
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 93.36
PF08885251 GSCFA: GSCFA family; InterPro: IPR014982 This grou 91.9
>PLN03156 GDSL esterase/lipase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.8e-79  Score=588.09  Aligned_cols=320  Identities=46%  Similarity=0.872  Sum_probs=280.3

Q ss_pred             CCccEEEEcCCCcccCCCCCCCccccCCCCCCCCccCCCCCCccccCCCCcHHHHHHHhcCCCCCCCCCCCCCccccccc
Q 018245           37 NNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLL  116 (359)
Q Consensus        37 ~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~~~~~~~GRfSnG~~~~d~la~~lgl~~~~p~~l~~~~~~~~~~  116 (359)
                      ..+++|||||||++|+||++++.+..++++||||++||+++|+||||||++|+||||+.||+++++|||+++..++.++.
T Consensus        25 ~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~~ppyl~~~~~~~~~~  104 (351)
T PLN03156         25 AKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPAIPAYLDPSYNISDFA  104 (351)
T ss_pred             CCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCCCCCCcCcccCchhhc
Confidence            46999999999999999998877666788999999999877999999999999999999999778999998765567889


Q ss_pred             cCccccccccccCCCCCCCccccCHHHHHHHHHHHHHHHhhhhChhhHHhhhcCceEEEEeccchhHhhhhcCCCcCcCC
Q 018245          117 HGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQY  196 (359)
Q Consensus       117 ~g~NfA~gGA~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~  196 (359)
                      +|+|||+||+++.+.+......+++..||++|.++++++....|...+....+++||+||||+|||...|+..+......
T Consensus       105 ~GvNFA~agag~~~~~~~~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~~i~iG~NDy~~~~~~~~~~~~~~  184 (351)
T PLN03156        105 TGVCFASAGTGYDNATSDVLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALYLISIGTNDFLENYYTFPGRRSQY  184 (351)
T ss_pred             ccceeecCCccccCCCccccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeEEEEecchhHHHHhhccccccccC
Confidence            99999999999877654333467899999999998888776666545556679999999999999987554322222234


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCccccccccc--CCcchhHHHHHHHHHHHHHHHHHHHHHHHhh-
Q 018245          197 TVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQ--DQTACVESYNKVAASLNSKIREKLAILRRTI-  273 (359)
Q Consensus       197 ~~~~~~~~~~~~i~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~--~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~-  273 (359)
                      +++++++.+++.+.+.|++||++|||||+|+|+||+||+|..+...  ...+|.+.+|.+++.||++|++++++|++++ 
T Consensus       185 ~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~p  264 (351)
T PLN03156        185 TVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMGGSECVEEYNDVALEFNGKLEKLVTKLNKELP  264 (351)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            6788999999999999999999999999999999999999875432  1357999999999999999999999999999 


Q ss_pred             CceEEEeechhhhHHHHhCccCCCCcccCcccccCcccCCCccCCCCC--CCCCCCCceEecCCChhHHHHHHHHHHHHc
Q 018245          274 GIKAAYIDCYDIILDAVNKPKKYGFTETAKGCCGTGTVEFGDTCRGLT--TCTDAGKYIFWDAVHPTQKMYQIIARQGLE  351 (359)
Q Consensus       274 ~~~i~~~D~~~~~~~ii~np~~yGf~~~~~~Ccg~g~~~~~~~C~~~~--~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~  351 (359)
                      +++|+++|+|.++.++++||++|||++++++||+.|.++....|++..  +|++|++|+|||++|||+++|++||+.+++
T Consensus       265 g~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~~~~~~C~~~~~~~C~~p~~yvfWD~~HPTe~a~~~iA~~~~~  344 (351)
T PLN03156        265 GIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMFEMGYLCNRNNPFTCSDADKYVFWDSFHPTEKTNQIIANHVVK  344 (351)
T ss_pred             CCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCCCCccccCCCCCCccCCccceEEecCCCchHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999988888788898764  799999999999999999999999999999


Q ss_pred             Ccccc
Q 018245          352 SLDVN  356 (359)
Q Consensus       352 ~~~~~  356 (359)
                      ++.++
T Consensus       345 ~l~~~  349 (351)
T PLN03156        345 TLLSK  349 (351)
T ss_pred             HHHHh
Confidence            88765

>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional Back     alignment and domain information
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] Back     alignment and domain information
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A Back     alignment and domain information
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases Back     alignment and domain information
>cd01823 SEST_like SEST_like Back     alignment and domain information
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01824 Phospholipase_B_like Phospholipase-B_like Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional Back     alignment and domain information
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases Back     alignment and domain information
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A Back     alignment and domain information
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans Back     alignment and domain information
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases Back     alignment and domain information
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases Back     alignment and domain information
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family Back     alignment and domain information
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B Back     alignment and domain information
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] Back     alignment and domain information
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>KOG3670 consensus Phospholipase [Lipid transport and metabolism] Back     alignment and domain information
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism] Back     alignment and domain information
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query359
3kvn_X 632 Crystal Structure Of The Full-Length Autotransporte 4e-05
>pdb|3KVN|X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa Length = 632 Back     alignment and structure 
Iteration: 1

 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 34/227 (14%)
Query: 128 YDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIG---NSIFLLSMGTNDFLQ 184
           YD +TA   S+  + R    L+    +L     V +A + +G   N+++ ++ G NDFLQ
Sbjct: 109 YDSITAANGSL--IERDNTLLRSRDGYL-----VDRARQGLGADPNALYYITGGGNDFLQ 161
Query: 185 NYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIV--KTLQ 242
              L   +++Q             + + ++A++  GA  +VV  +P LG  P      LQ
Sbjct: 162 GRILNDVQAQQ---------AAGRLVDSVQALQQAGARYIVVWLLPDLGLTPATFGGPLQ 212
Query: 243 DQTACVESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDAVNKPKKYGFTETA 302
                       A+ L+     +L       G     ++   ++ + +  P  +G     
Sbjct: 213 ----------PFASQLSGTFNAELTAQLSQAGANVIPLNIPLLLKEGMANPASFGLAADQ 262
Query: 303 K--GCCGTGTVEFGDTCRGLTTCT-DAGKYIFWDAVHPTQKMYQIIA 346
              G C +G     +   G+   T D  K +F D+VHPT    ++IA
Sbjct: 263 NLIGTCFSGNGCTMNPTYGINGSTPDPSKLLFNDSVHPTITGQRLIA 309

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query359
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 5e-80
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
3rjt_A216 Lipolytic protein G-D-S-L family; PSI-biology, mid 1e-04
2hsj_A214 Putative platelet activating factor; structr genom 2e-04
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 Back     alignment and structure
 Score =  255 bits (653), Expect = 5e-80
 Identities = 55/324 (16%), Positives = 119/324 (36%), Gaps = 21/324 (6%)

Query: 29  QFRRIAAQNNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLA 88
               + A +  + ++VFGDS  D G     A           +     +       G  A
Sbjct: 5   HHHHLEAPSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTYQNGSGEIFGPTA 64

Query: 89  TDFIAESFGFTNA-IPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEY 147
              +    G     + A   P   +  +  G ++A  G   D +  ++++      + + 
Sbjct: 65  PMLLGNQLGIAPGDLAASTSPVNAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDN 124

Query: 148 LKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVS 207
                     +   ++      N+++ ++ G NDFLQ   L   +++Q            
Sbjct: 125 TLLRSRDGYLVDRARQGLGADPNALYYITGGGNDFLQGRILNDVQAQQA---------AG 175

Query: 208 SMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLA 267
            + + ++A++  GA  +VV  +P LG  P               ++++ + N+++  +L+
Sbjct: 176 RLVDSVQALQQAGARYIVVWLLPDLGLTPATFG----GPLQPFASQLSGTFNAELTAQLS 231

Query: 268 ILRRTIGIKAAYIDCYDIILDAVNKPKKYGFTETAK--GCCGTGTVEFGDTCRGL-TTCT 324
                 G     ++   ++ + +  P  +G        G C +G     +   G+  +  
Sbjct: 232 QA----GANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGNGCTMNPTYGINGSTP 287

Query: 325 DAGKYIFWDAVHPTQKMYQIIARQ 348
           D  K +F D+VHPT    ++IA  
Sbjct: 288 DPSKLLFNDSVHPTITGQRLIADY 311
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 216 Back     alignment and structure
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 Length = 214 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query359
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 100.0
3mil_A240 Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola 99.68
3rjt_A216 Lipolytic protein G-D-S-L family; PSI-biology, mid 99.55
2q0q_A216 ARYL esterase; SGNH hydrolase, oligomeric enzyme, 99.51
3dci_A232 Arylesterase; SGNH_hydrolase SUBF structural genom 99.46
1yzf_A195 Lipase/acylhydrolase; structural GENO PSI, protein 99.41
1vjg_A218 Putative lipase from the G-D-S-L family; structura 99.35
1esc_A306 Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. 99.32
2vpt_A215 Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos 99.31
1ivn_A190 Thioesterase I; hydrolase, protease; 1.90A {Escher 99.28
2hsj_A214 Putative platelet activating factor; structr genom 99.24
3dc7_A232 Putative uncharacterized protein LP_3323; NESG LPR 99.21
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 99.18
3skv_A385 SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydr 99.12
3p94_A204 GDSL-like lipase; serine hydrolase, catalytic tria 99.08
1k7c_A233 Rhamnogalacturonan acetylesterase; N-linked glycos 99.04
1fxw_F229 Alpha2, platelet-activating factor acetylhydrolase 99.04
3bzw_A274 Putative lipase; protein structure initiative II, 99.02
4hf7_A209 Putative acylhydrolase; PF13472 family, structural 98.97
1es9_A232 PAF-AH, platelet-activating factor acetylhydrolase 98.94
2o14_A375 Hypothetical protein YXIM; NESG, X-RAY, SR595, str 98.92
2wao_A341 Endoglucanase E; plant cell WALL degradation, carb 98.88
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 98.8
2waa_A347 Acetyl esterase, xylan esterase, putative, AXE2C; 98.66
2w9x_A366 AXE2A, CJCE2B, putative acetyl xylan esterase; car 98.58
4i8i_A271 Hypothetical protein; 5-stranded beta sheet flanke 89.41
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Back     alignment and structure
Probab=100.00  E-value=2.7e-60  Score=489.49  Aligned_cols=289  Identities=22%  Similarity=0.331  Sum_probs=230.0

Q ss_pred             hhhcCCccEEEEcCCCcccCCCCCCCcccc----CCCCCCCCccCCCCCCccccC-CCCcHHHHHHHhcCCCC-CCCCCC
Q 018245           33 IAAQNNVTFMLVFGDSSVDPGNNNRLATTT----KGNFLPYGKNFFNGRPTGRFT-DGRLATDFIAESFGFTN-AIPAFL  106 (359)
Q Consensus        33 ~~~~~~~~~l~vFGDSlsD~Gn~~~~~~~~----~~~~~Pyg~~~~~~~~~GRfS-nG~~~~d~la~~lgl~~-~~p~~l  106 (359)
                      ...+++|++||+||||||||||........    +-..|| |.+|    ++|||| ||++|+||||+.||+++ +++||+
T Consensus         9 ~~~~~~~~~i~~FGDS~sDtGn~~~~~~~~~~~~~~~~~~-g~~~----~~Gr~s~~G~~~~D~ia~~lgl~~~~l~p~~   83 (632)
T 3kvn_X            9 LEAPSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRV-GPTY----QNGSGEIFGPTAPMLLGNQLGIAPGDLAAST   83 (632)
T ss_dssp             TSCCCCCSCEEEECSTTTCCSCSBCTTSSTTCBCCSSCBC-SSSC----CTTSSCCBCCCHHHHHHHHTTCCGGGGSBSS
T ss_pred             ccCCCCCccEEEEccccccCCCcccccCCcCCccccccCC-CCcc----ccCcccccCCchHHHHHHHcCCCccccCccc
Confidence            356789999999999999999975432211    111122 6555    589999 99999999999999963 356665


Q ss_pred             CCCccccccccCccccccccccC---C-CCCCCccccCHHHHHHHHH-HHHHHHhhhhChhhHHhhhcCceEEEEeccch
Q 018245          107 DPTIKKIDLLHGVSFASAGSGYD---D-LTANLSSVLSVSRQLEYLK-HYKIHLGNLVGVKKAEEIIGNSIFLLSMGTND  181 (359)
Q Consensus       107 ~~~~~~~~~~~g~NfA~gGA~~~---~-~~~~~~~~~~l~~Qi~~f~-~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND  181 (359)
                      .+...+.++.+|+|||+|||++.   + .+.....++++..||.+|. .+++++..     ......+++||+||||+||
T Consensus        84 ~~~~~~~~~~~G~NfA~gGa~~~~~l~~~~~~~~~~~~l~~ql~~~~~~~l~~~~~-----~~~~~~~~sL~~v~iG~ND  158 (632)
T 3kvn_X           84 SPVNAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYLVDRAR-----QGLGADPNALYYITGGGND  158 (632)
T ss_dssp             CHHHHHHTCCCCSBCCCTTCCHHHHHHHHHSTTCEEEEETTEEEEEECCHHHHHHT-----TTCCCCTTSEEEECCSHHH
T ss_pred             cccccccccccCceEeeccccccccccccccccccccccchhHHHHHHHHHHHHhh-----ccCccCCCCEEEEEEechh
Confidence            43223577899999999999962   2 1222334556666776665 44433321     1235679999999999999


Q ss_pred             hHhhhhcCCCcCcCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCcccccccccCCcchhHHHHHHHHHHHHH
Q 018245          182 FLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSK  261 (359)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~  261 (359)
                      |+..+..         ..++++.+++++.++|++||++|||+|+|+++||+||+|...    ..+|.+.+|++++.||++
T Consensus       159 ~~~~~~~---------~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~~pp~gc~P~~~----~~~c~~~~n~~~~~~N~~  225 (632)
T 3kvn_X          159 FLQGRIL---------NDVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTPATF----GGPLQPFASQLSGTFNAE  225 (632)
T ss_dssp             HHTTCCC---------SHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCCGGGSTTTT----TSTTHHHHHHHHHHHHHH
T ss_pred             hhccccc---------ChHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccc----CCCchHHHHHHHHHHHHH
Confidence            9876532         135788999999999999999999999999999999999853    247999999999999999


Q ss_pred             HHHHHHHHHHhhCceEEEeechhhhHHHHhCccCCCCcccC--cccccCcccCCCccCCCC------CCCCCCCCceEec
Q 018245          262 IREKLAILRRTIGIKAAYIDCYDIILDAVNKPKKYGFTETA--KGCCGTGTVEFGDTCRGL------TTCTDAGKYIFWD  333 (359)
Q Consensus       262 L~~~l~~l~~~~~~~i~~~D~~~~~~~ii~np~~yGf~~~~--~~Ccg~g~~~~~~~C~~~------~~C~~p~~ylfwD  333 (359)
                      |++++++|    +.+|+++|+|.++.++++||++|||++++  ++||+.+.     .|++.      .+|+||++|+|||
T Consensus       226 L~~~l~~l----~~~i~~~D~y~~~~~~~~np~~yGf~~~~~~~~cCg~g~-----~C~~~~~~~~~~~C~~~~~y~fwD  296 (632)
T 3kvn_X          226 LTAQLSQA----GANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGN-----GCTMNPTYGINGSTPDPSKLLFND  296 (632)
T ss_dssp             HHHHHHHH----CCCEEEECHHHHHHHHHHCGGGGTCCTTSCTTTCBSSCT-----TSCBCTTTSTTSSSCCGGGCSBSS
T ss_pred             HHHHHHhC----CCeEEEEEcHHHHHHHHhCHHhcCCCcCCCCccccCCCC-----ccCCcccccccccCCCccceEEec
Confidence            99999988    45899999999999999999999999975  69998763     68763      3899999999999


Q ss_pred             CCChhHHHHHHHHHHHHcCc
Q 018245          334 AVHPTQKMYQIIARQGLESL  353 (359)
Q Consensus       334 ~vHPT~~~h~~iA~~~~~~~  353 (359)
                      ++||||++|++||+.+++++
T Consensus       297 ~~HpTe~~~~~ia~~~~~~~  316 (632)
T 3kvn_X          297 SVHPTITGQRLIADYTYSLL  316 (632)
T ss_dssp             SSCBCHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHhcc
Confidence            99999999999999999854
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* Back     alignment and structure
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Back     alignment and structure
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 Back     alignment and structure
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A Back     alignment and structure
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A Back     alignment and structure
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} Back     alignment and structure
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* Back     alignment and structure
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 Back     alignment and structure
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 Back     alignment and structure
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP} Back     alignment and structure
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} Back     alignment and structure
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A* Back     alignment and structure
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A Back     alignment and structure
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 Back     alignment and structure
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A* Back     alignment and structure
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 Back     alignment and structure
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* Back     alignment and structure
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus} Back     alignment and structure
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus} Back     alignment and structure
>4i8i_A Hypothetical protein; 5-stranded beta sheet flanked by 8 helices fold, structural joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides uniformis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query359
d1esca_302 Esterase {Streptomyces scabies [TaxId: 1930]} 99.67
d1k7ca_233 Rhamnogalacturonan acetylesterase {Fungus (Aspergi 99.34
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 99.28
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 99.24
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 99.21
d1yzfa1195 Lipase/acylhydrolase {Enterococcus faecalis [TaxId 99.13
d1jrla_179 Thioesterase I, TAP {Escherichia coli [TaxId: 562] 98.98
d2hsja1211 Uncharacterized protein SP1450 {Streptococcus pneu 98.93
d1vjga_201 Hypothetical protein alr1529 {Nostoc sp. pcc 7120 98.78
d1fxwf_212 Platelet-activating factor acetylhydrolase {Cow (B 98.74
d1es9a_212 Platelet-activating factor acetylhydrolase {Cow (B 98.71
>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: Esterase
domain: Esterase
species: Streptomyces scabies [TaxId: 1930]

Probab=99.67  E-value=9.6e-17  Score=147.05  Aligned_cols=217  Identities=15%  Similarity=0.088  Sum_probs=118.4

Q ss_pred             CCcHHHHHHHhcCCCCCCCCCCCCCccccccccCccccccccccCCCCCCC---ccccCHHHHHHHHHHHHHHHhhhhCh
Q 018245           85 GRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANL---SSVLSVSRQLEYLKHYKIHLGNLVGV  161 (359)
Q Consensus        85 G~~~~d~la~~lgl~~~~p~~l~~~~~~~~~~~g~NfA~gGA~~~~~~~~~---~~~~~l~~Qi~~f~~~~~~~~~~~G~  161 (359)
                      +..|+++|++.|+.+..            ....-.|||.+|+++.+.....   ........|++..             
T Consensus        35 ~~~y~~~la~~l~~~~~------------~~~~~~n~a~sGatt~~~~~~~~~~~~~~~~~~Q~~~l-------------   89 (302)
T d1esca_          35 KENYPAVATRSLADKGI------------TLDVQADVSCGGALIHHFWEKQELPFGAGELPPQQDAL-------------   89 (302)
T ss_dssp             TTCHHHHHHHHHHTTTC------------EEEEEEECCCTTCCGGGGTSCEECGGGCCEECCGGGGC-------------
T ss_pred             CcCHHHHHHHHhccccC------------CceeEEEeeecccchhhhhccccccccccchhhhhhhc-------------
Confidence            67899999999986411            1122369999999875433211   0111111233311             


Q ss_pred             hhHHhhhcCceEEEEeccchhHhhhhcC------CCcC----------c----------CCC----hHHHHHHHHHHHHH
Q 018245          162 KKAEEIIGNSIFLLSMGTNDFLQNYYLE------PTRS----------R----------QYT----VEQYENYLVSSMFE  211 (359)
Q Consensus       162 ~~~~~~~~~sL~~i~iG~ND~~~~~~~~------~~~~----------~----------~~~----~~~~~~~~~~~i~~  211 (359)
                           ...-+|++|+||+||+.......      ....          .          ...    ....++.+...+.+
T Consensus        90 -----~~~~dlVtl~iGgND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  164 (302)
T d1esca_          90 -----KQDTQLTVGSLGGNTLGFNRILKQCSDELRKPSLLPGDPVDGDEPAAKCGEFFGTGDGKQWLDDQFERVGAELEE  164 (302)
T ss_dssp             -----CTTCCEEEECCCHHHHTHHHHHHHTCTTTTSSCSSCCCCSSTTSCGGGHHHHTTTSHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cCCCCEEEEecCCcccchhhhhhhhhhccccccccccccccccccccccccccccchhhhhhHHHHHHHHHHHHH
Confidence                 12457999999999985421110      0000          0          000    11223344445555


Q ss_pred             HHHHHHHcC-CcEEEEeCCCCCCc---ccccccccC---------CcchhHHHHHHHHHHHHHHHHHHHHHHHhhCceEE
Q 018245          212 DIKAMKSLG-ATRLVVVGVPPLGC---MPIVKTLQD---------QTACVESYNKVAASLNSKIREKLAILRRTIGIKAA  278 (359)
Q Consensus       212 ~l~~L~~~G-ar~~vv~~lpplg~---~P~~~~~~~---------~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~i~  278 (359)
                      .++++.+.. --+|++++.|++.-   .|.......         ...-...++++.+.+|..+++...      ...+.
T Consensus       165 ~~~~i~~~~p~a~iv~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~i~~~A~------~~~v~  238 (302)
T d1esca_         165 LLDRIGYFAPDAKRVLVGYPRLVPEDTTKCLTAAPGQTQLPFADIPQDALPVLDQIQKRLNDAMKKAAA------DGGAD  238 (302)
T ss_dssp             HHHHHHHHSTTCEEEEECCCCCSCSCGGGGGSCCTTCSSCTTTTCCTTTHHHHHHHHHHHHHHHHHHHH------TTTCE
T ss_pred             HHHHHHHHCCCCeEEEecCcccccccCCcccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH------HcCCE
Confidence            555555442 33688888886531   000000000         112344567777888888776543      34588


Q ss_pred             EeechhhhHHHHhCccCCCCcccCcccccCcccCCCccCCCCC-CCCCCCCceEecCCChhHHHHHHHHHHHHcCcc
Q 018245          279 YIDCYDIILDAVNKPKKYGFTETAKGCCGTGTVEFGDTCRGLT-TCTDAGKYIFWDAVHPTQKMYQIIARQGLESLD  354 (359)
Q Consensus       279 ~~D~~~~~~~ii~np~~yGf~~~~~~Ccg~g~~~~~~~C~~~~-~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~~~  354 (359)
                      ++|++..|..       +++-...++|...          ... ...++..+++||.+|||++||++||+.+.+.+.
T Consensus       239 ~vd~~~~f~~-------~~~c~~~~~~~~~----------~~~~~~~~~~~~~~~d~~HPn~~G~~~iA~~i~~~l~  298 (302)
T d1esca_         239 FVDLYAGTGA-------NTACDGADRGIGG----------LLEDSQLELLGTKIPWYAHPNDKGRDIQAKQVADKIE  298 (302)
T ss_dssp             EECTGGGCTT-------SSTTSTTSCSBCC----------SSSEEEEESSSCEEECSSCBCHHHHHHHHHHHHHHHH
T ss_pred             EEechhhhcc-------ccccccccccccc----------cccccccccccccccCCcCCCHHHHHHHHHHHHHHHH
Confidence            9999886642       1111111122110          000 223577899999999999999999999987654
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} Back     information, alignment and structure
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]} Back     information, alignment and structure
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} Back     information, alignment and structure