BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018246
(359 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 463 bits (1192), Expect = e-131, Method: Compositional matrix adjust.
Identities = 217/356 (60%), Positives = 260/356 (73%)
Query: 1 MAKSPETEHPQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNE 60
M+KSPE EHP KA GWAARD +G SPF+FSRR TG +DV K+L+CG+CHSDLH +N+
Sbjct: 5 MSKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKND 64
Query: 61 WGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNM 120
WG + YP+VPGHEIVG VT+VG+ V K GDKVGVG LV +C CESC LENYCP M
Sbjct: 65 WGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKM 124
Query: 121 ILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGM 180
ILTY SI DGT TYGGYS+ +V ++ Y++RFPDNMPLD GAPLLCAGITVYSP+KY+G+
Sbjct: 125 ILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGL 184
Query: 181 TEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK 240
EP KAFG KVTVISTSP K+ EA+ GAD+FLVS D +
Sbjct: 185 DEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQ 244
Query: 241 VKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLEVPIFALVGARRLVGG 300
++AA GT+D IIDTVSAVH L P PEKPLE+P F+L+ R++V G
Sbjct: 245 MQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAG 304
Query: 301 SNVGGMKETQEMLDFCAKHNIAADIELVRMDQINTAMERLAKSDVKYRFVIDVGNS 356
S +GGMKETQEM+DF AKHNI ADIE++ D +NTAMERLAK+DV+YRFVIDVGN+
Sbjct: 305 SGIGGMKETQEMIDFAAKHNITADIEVISTDYLNTAMERLAKNDVRYRFVIDVGNT 360
>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases, Atcad5
pdb|2CF6|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases Atcad5
Length = 357
Score = 288 bits (738), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/351 (45%), Positives = 223/351 (63%)
Query: 8 EHPQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYP 67
E +K GWAARD +G SP+ ++ RETG +DV I+I+ CGICH+DLH +N+ G++NYP
Sbjct: 5 EAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYP 64
Query: 68 IVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSI 127
+VPGHE+VG V +VG++VSKF GD VGVG LV C C C++ LE YCP I +YN +
Sbjct: 65 MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDV 124
Query: 128 DRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXX 187
+G T GG++ VV Q +V++ P+ M ++ APLLCAG+TVYSP+ ++G+ +P
Sbjct: 125 YINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRG 184
Query: 188 XXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGT 247
I KA G VTVIS+S KK EA+ LGAD +++ SD AK+ +
Sbjct: 185 GILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADS 244
Query: 248 MDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLEVPIFALVGARRLVGGSNVGGMK 307
+DY+IDTV H+L P PL+ L+ R+++ GS +G MK
Sbjct: 245 LDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMK 304
Query: 308 ETQEMLDFCAKHNIAADIELVRMDQINTAMERLAKSDVKYRFVIDVGNSKL 358
ET+EML+FC + +++ IE+V+MD +NTA ERL K+DV+YRFV+DV S L
Sbjct: 305 ETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDVEGSNL 355
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 281 bits (719), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 156/344 (45%), Positives = 198/344 (57%), Gaps = 7/344 (2%)
Query: 12 KAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPG 71
KA+G A P +RRE G +DV I+I +CG+CHSDLH R+EW T YP VPG
Sbjct: 24 KAVG--AYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPG 81
Query: 72 HEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDG 131
HEIVG V VG+ V K+ GD VGVG +V SC+ CE C+ GLENYC +M TYNS D
Sbjct: 82 HEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDE 141
Query: 132 T-KTYGGYSDLIVVDQHYVLRFPD-NMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXX 189
T GGYS IVV + YVLR L A APLLCAGIT YSP++++ P
Sbjct: 142 PGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHW-QAGPGKKVGV 200
Query: 190 XXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMD 249
+ A G V +TS K EA LGAD + S + ++ A + + D
Sbjct: 201 VGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVVNSRNADEMAAHLKSFD 259
Query: 250 YIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLEVP-IFALVGARRLVGGSNVGGMKE 308
+I++TV+A H+L P P + P +F L+ RR + GS +GG+ E
Sbjct: 260 FILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPE 319
Query: 309 TQEMLDFCAKHNIAADIELVRMDQINTAMERLAKSDVKYRFVID 352
TQEMLDFCA+H I ADIE++R DQIN A ER+ + DVKYRFVID
Sbjct: 320 TQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVID 363
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 225 bits (573), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 187/349 (53%), Gaps = 16/349 (4%)
Query: 15 GWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEI 74
G+A F P FSR G DV I IL+ GICHSD+H A +EW YP++PGHEI
Sbjct: 7 GFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEI 66
Query: 75 VGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSID--RDGT 132
G + +VG V KFK GD VGVG V SC+ C+ C++ E +C ++ TY+ +D D
Sbjct: 67 AGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNE 126
Query: 133 KTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXX 192
GGYS+ IVVD++YV+ N PL+ APLLCAGIT YSP+K+ +T+
Sbjct: 127 PHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKVTK-GTKVGVAGF 185
Query: 193 XXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYII 252
A G +V+V + + K+ +A+S +G F +DP + K +D+II
Sbjct: 186 GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-MGVKHFY--TDPKQCKE---ELDFII 239
Query: 253 DTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLEV-PIFALVG----ARRLVGGSNVGGMK 307
T+ + L P P+EV P+ ++ R V GS +GG+K
Sbjct: 240 STIPTHYDLKDYLKLLTYNGDLALVGLP--PVEVAPVLSVFDFIHLGNRKVYGSLIGGIK 297
Query: 308 ETQEMLDFCAKHNIAADIELVRMDQINTAMERLAKSDVKYRFVIDVGNS 356
ETQEM+DF KHNI +I+L+ I+TA L K+R+VID+ S
Sbjct: 298 ETQEMVDFSIKHNIYPEIDLILGKDIDTAYHNLTHGKAKFRYVIDMKKS 346
>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1Q1N|A Chain A, Apo And Holo Structures Of An Nadp(h)-dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|A Chain A, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|B Chain B, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
Length = 360
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 161/321 (50%), Gaps = 12/321 (3%)
Query: 39 DVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVG-NNVSKFKEGDKVGVG 97
D+ IKI CG+C SD+HCA WG P+V GHEIVG V K+G + S K G +VGVG
Sbjct: 35 DIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVG 94
Query: 98 VLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMP 157
V SC +C+ C+ E YC + TY+ DG + GGY++ + V +H+V+ P+N+P
Sbjct: 95 AQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIP 154
Query: 158 LDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSP 217
APLLC G+TVYSP+ G P I KA G + VIS S
Sbjct: 155 SHLAAPLLCGGLTVYSPLVRNGCG-PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSS 213
Query: 218 KKESEAISKLGADAFLVSSDPAKV-KAAMGTMDYIIDTVSAV----HSLAPXXXXXXXXX 272
+K +A+ K+GAD ++ + + + T D I+ S++ ++ P
Sbjct: 214 RKREDAM-KMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRI 272
Query: 273 XXXXXXXPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADIELVRMDQ 332
+ L + + L + S +G +KE ++L ++ +I +E + + +
Sbjct: 273 VSISIPEQHEMLSLKPYGLKAVS--ISYSALGSIKELNQLLKLVSEKDIKIWVETLPVGE 330
Query: 333 --INTAMERLAKSDVKYRFVI 351
++ A ER+ K DV+YRF +
Sbjct: 331 AGVHEAFERMEKGDVRYRFTL 351
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 152/323 (47%), Gaps = 13/323 (4%)
Query: 34 ETGADDVTIKILFCGICHSDLHCARNEWGVT-NYPIVPGHEIVGTVTKVGNNVSKFKEGD 92
+ G V +KI G+CH+DLH A +W V P +PGHE VG V+ VG+ VS+ KEGD
Sbjct: 24 QPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGD 83
Query: 93 KVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRF 152
+VGV L ++C CE C QG E C T S++ GGY + +V D +YV
Sbjct: 84 RVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVN-------GGYGEYVVADPNYVGLL 136
Query: 153 PDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTV 212
PD + AP+LCAG+TVY +K T P +A GL+V
Sbjct: 137 PDKVGFVEIAPILCAGVTVYKGLKVTD-TRPGQWVVISGIGGLGHVAVQYARAMGLRVAA 195
Query: 213 ISTSPKKESEAISKLGADAFLVS--SDPAK-VKAAMGTMDYIIDTVSAVHSLAPXXXXXX 269
+ K + A +LGA+ + + +DPA ++ +G ++ T + + +
Sbjct: 196 VDIDDAKLNLA-RRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVR 254
Query: 270 XXXXXXXXXXPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADIELVR 329
P PIF +V + GS VG + QE LDF A ++ A + +
Sbjct: 255 RGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVKATVSTAK 314
Query: 330 MDQINTAMERLAKSDVKYRFVID 352
+D +N RL + V+ R V+D
Sbjct: 315 LDDVNDVFGRLREGKVEGRVVLD 337
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 148/317 (46%), Gaps = 13/317 (4%)
Query: 39 DVTIKILFCGICHSDLHCARNEWGVT-NYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVG 97
+V ++I CG+CH+DLH A +W V P++PGHE VG V +VG V+ K GD+VG+
Sbjct: 27 EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIP 86
Query: 98 VLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMP 157
L ++C C+ C G E C + S+D GGY++ YV++ PDN+
Sbjct: 87 WLYSACGHCDYCLSGQETLCEHQKNAGYSVD-------GGYAEYCRAAADYVVKIPDNLS 139
Query: 158 LDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSP 217
+ AP+ CAG+T Y +K G +P KA GL V +
Sbjct: 140 FEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGD 198
Query: 218 KKESEAISKLGADAFL--VSSDPAK-VKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXX 274
+K E +LGAD + + D AK +K +G + + T + +
Sbjct: 199 EK-LELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGAC 257
Query: 275 XXXXXPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADIELVRMDQIN 334
P + + +PIF V + GS VG K+ QE L F A+ + IE+ +++IN
Sbjct: 258 VLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTIIEVQPLEKIN 317
Query: 335 TAMERLAKSDVKYRFVI 351
+R+ K + R V+
Sbjct: 318 EVFDRMLKGQINGRVVL 334
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 148/317 (46%), Gaps = 13/317 (4%)
Query: 39 DVTIKILFCGICHSDLHCARNEWGVT-NYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVG 97
+V ++I CG+CH+DLH A +W V P++PGHE VG V +VG V+ K GD+VG+
Sbjct: 27 EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIP 86
Query: 98 VLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMP 157
L ++C C+ C G E C + S+D GGY++ YV++ PDN+
Sbjct: 87 WLYSACGHCDYCLSGQETLCEHQKNAGYSVD-------GGYAEYCRAAADYVVKIPDNLS 139
Query: 158 LDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSP 217
+ AP+ CAG+T Y +K G +P KA GL V +
Sbjct: 140 FEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIYGIGGFGHVAVQYAKAMGLNVVAVDIGD 198
Query: 218 KKESEAISKLGADAFL--VSSDPAK-VKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXX 274
+K E +LGAD + + D AK +K +G + + T + +
Sbjct: 199 EK-LELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGAC 257
Query: 275 XXXXXPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADIELVRMDQIN 334
P + + +PIF V + GS VG K+ QE L F A+ + IE+ +++IN
Sbjct: 258 VLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTIIEVQPLEKIN 317
Query: 335 TAMERLAKSDVKYRFVI 351
+R+ K + R V+
Sbjct: 318 EVFDRMLKGQINGRVVL 334
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 142/322 (44%), Gaps = 13/322 (4%)
Query: 36 GADDVTIKILFCGICHSDLHCARNEWGVTN-YPIVPGHEIVGTVTKVGNNVSKFKEGDKV 94
G V +KI G+CH+DLH A +W V P +PGHE VG V VG+ V++ KEGD+V
Sbjct: 30 GPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRV 89
Query: 95 GVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPD 154
G+ L +C CE C G E C S G GGY++ ++ D +YV P
Sbjct: 90 GIPWLYTACGCCEHCLTGWETLC-------ESQQNTGYSVNGGYAEYVLADPNYVGILPK 142
Query: 155 NMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVIS 214
N+ AP+LCAG+TVY +K P +A GL V I
Sbjct: 143 NVEFAEIAPILCAGVTVYKGLKQTN-ARPGQWVAISGIGGLGHVAVQYARAMGLHVAAID 201
Query: 215 TSPKKESEAISKLGADAFLVS--SDPAK-VKAAMGTMDYIIDTVSAVHSLAPXXXXXXXX 271
K E KLGA + + DP + ++ +G ++ T + +
Sbjct: 202 IDDAK-LELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRG 260
Query: 272 XXXXXXXXPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADIELVRMD 331
P PIF +V + GS VG + QE LDF + + A I ++D
Sbjct: 261 GTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEGLVKATIHPGKLD 320
Query: 332 QINTAMERLAKSDVKYRFVIDV 353
IN ++++ ++ R V+++
Sbjct: 321 DINQILDQMRAGQIEGRIVLEM 342
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 148/326 (45%), Gaps = 15/326 (4%)
Query: 34 ETGADDVTIKILFCGICHSDLHCARNEWGVT-NYPIVPGHEIVGTVTKVGNNVSKFKEGD 92
+ G + + I G+CH+DLH A +W V N P +PGHE VG V+ VG+ V KEGD
Sbjct: 47 QPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNPPFIPGHEGVGFVSAVGSGVKHVKEGD 106
Query: 93 KVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRF 152
+VG+ L +C C C G E C + T S++ GG+++ +V D ++V
Sbjct: 107 RVGIPWLYTACGHCRHCLGGWETLCEEQLNTGYSVN-------GGFAEYVVADPNFVGHL 159
Query: 153 PDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTV 212
P N+ + AP+LCAG+TVY +K T+P +A GL V
Sbjct: 160 PKNIDFNEIAPVLCAGVTVYKGLKVTD-TKPGDWVVISGIGGLGHMAVQYARAMGLNVAA 218
Query: 213 ISTSPKKESEAISKLGADAFLVS---SDPAKV--KAAMGTMDYIIDTVSAVHSLAPXXXX 267
+ +K A +LGA + + +DPA K G ++ T + +
Sbjct: 219 VDIDDRKLDLA-RRLGATVTVNAKTVADPAAYIRKETDGGAQGVLVTAVSPKAFEQALGM 277
Query: 268 XXXXXXXXXXXXPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADIEL 327
P + IF +V V GS VG + QE LDF A + A I+
Sbjct: 278 VARGGTVSLNGLPPGDFPLSIFNMVLNGVTVRGSIVGTRLDLQESLDFAADGKVKATIQT 337
Query: 328 VRMDQINTAMERLAKSDVKYRFVIDV 353
+++ IN + + + +++ R V+D+
Sbjct: 338 GKLEDINAIFDDMRQGNIEGRIVMDL 363
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 132/323 (40%), Gaps = 15/323 (4%)
Query: 37 ADDVTIKILFCGICHSDLHCARNEWGV-TNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVG 95
A+++ I + + G+CH+DLH +W + P+V GHE G V +G NV +K GD G
Sbjct: 30 ANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAG 89
Query: 96 VGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDN 155
+ L SC CE C+ G E+ CP+ D G G + D P
Sbjct: 90 IKWLNGSCMACEYCELGNESNCPHA-------DLSGYTHDGSFQQYATADAVQAAHIPQG 142
Query: 156 MPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVIST 215
L AP+LCAGITVY +K + KA G +V I
Sbjct: 143 TDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDG 202
Query: 216 SPKKESEAISKLGADAFLVSSDP-----AKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXX 270
KE E +G + F+ + A +KA G +I+ + ++
Sbjct: 203 GEGKE-ELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRA 261
Query: 271 XXXXXXXXXPEKPLEVP-IFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADIELVR 329
P +F V + GS VG +T+E LDF A+ + + I++V
Sbjct: 262 NGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLVKSPIKVVG 321
Query: 330 MDQINTAMERLAKSDVKYRFVID 352
+ + E++ K + R+V+D
Sbjct: 322 LSTLPEIYEKMEKGQIVGRYVVD 344
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 140/333 (42%), Gaps = 30/333 (9%)
Query: 33 RETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGD 92
R ++ + + +CG+CH+DLH A ++G V GHE +G V ++G +VS + GD
Sbjct: 22 RAIKPNEALLDMEYCGVCHTDLHVAAGDYG-NKAGTVLGHEGIGIVKEIGADVSSLQVGD 80
Query: 93 KVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRF 152
+V V C CE C G E +C + S+D GG ++ +V Y ++
Sbjct: 81 RVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVD-------GGMAEEAIVVADYAVKV 133
Query: 153 PDNM-PLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVT 211
PD + P++A + + CAG+T Y +K G+ FG KV
Sbjct: 134 PDGLDPIEA-SSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVI 192
Query: 212 VISTSPKKESEAISKLGADAFLVSSDP------AKVKAAMGTMDYIIDTVS------AVH 259
+ + K + A K+GAD + S D K+ +G I+ V+ AV
Sbjct: 193 AVDINQDKLNLA-KKIGADVIINSGDVNPVDEIKKITGGLGVQSAIVCAVARIAFEQAVA 251
Query: 260 SLAPXXXXXXXXXXXXXXXXPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKH 319
SL P E L VP G V GS VG + E F A+
Sbjct: 252 SLKPMGKMVAVALPNT-----EMTLSVPTVVFDGVE--VAGSLVGTRLDLAEAFQFGAEG 304
Query: 320 NIAADIELVRMDQINTAMERLAKSDVKYRFVID 352
+ + ++++IN ++ + ++ R VID
Sbjct: 305 KVKPIVATRKLEEINDIIDEMKAGKIEGRMVID 337
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 140/333 (42%), Gaps = 30/333 (9%)
Query: 33 RETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGD 92
R ++ + + +CG+CH+DLH A ++G V GHE +G V ++G +VS + GD
Sbjct: 22 RAIKPNEALLDMEYCGVCHTDLHVAAGDFG-NKAGTVLGHEGIGIVKEIGADVSSLQVGD 80
Query: 93 KVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRF 152
+V V C CE C G E +C + S+D GG ++ +V Y ++
Sbjct: 81 RVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVD-------GGMAEEAIVVADYAVKV 133
Query: 153 PDNM-PLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVT 211
PD + P++A + + CAG+T Y +K G+ FG KV
Sbjct: 134 PDGLDPIEA-SSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVI 192
Query: 212 VISTSPKKESEAISKLGADAFLVSSDP------AKVKAAMGTMDYIIDTVS------AVH 259
+ + K + A K+GAD + S D K+ +G I+ V+ AV
Sbjct: 193 AVDINQDKLNLA-KKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCAVARIAFEQAVA 251
Query: 260 SLAPXXXXXXXXXXXXXXXXPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKH 319
SL P E L VP G V GS VG + E F A+
Sbjct: 252 SLKPMGKMVAVAVPNT-----EMTLSVPTVVFDGVE--VAGSLVGTRLDLAEAFQFGAEG 304
Query: 320 NIAADIELVRMDQINTAMERLAKSDVKYRFVID 352
+ + ++++IN ++ + ++ R VID
Sbjct: 305 KVKPIVATRKLEEINDIIDEMKAGKIEGRMVID 337
>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
pdb|1H2B|B Chain B, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
Length = 359
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 139/344 (40%), Gaps = 48/344 (13%)
Query: 33 RETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVP---GHEIVGTVTKVGNNVSKFK 89
R G DV ++I G+CH+DLH + W P +P GHE VG + +V V +
Sbjct: 37 RLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 96
Query: 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYV 149
+GD V + V C +C+ G + +C N+ +ID GG+++ + V
Sbjct: 97 KGDPVILHPAVTDGT-CLACRAGEDMHCENLEFPGLNID-------GGFAEFMRTSHRSV 148
Query: 150 LRFPDNMP---LDAGAPLLCAGITVYSPMKYYGMT-EPXXXXXXXXXXXXXXXXXXIGKA 205
++ P ++ L APL AGIT Y +K T P + K
Sbjct: 149 IKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKV 208
Query: 206 FGLKVTVISTSPKKESEAIS-KLGADAFL-VSSDPAK----------VKAAM------GT 247
TVI+ K+E ++ +LGAD + DP K V AM T
Sbjct: 209 M-TPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQAT 267
Query: 248 MDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLEVPIFALVGARRLVGGSNVGGMK 307
+DY + + L L P ++ + GS VG
Sbjct: 268 VDYTPYLLGRMGRLIIVGYGGE--------------LRFPTIRVISSEVSFEGSLVGNYV 313
Query: 308 ETQEMLDFCAKHNIAADIELVRMDQINTAMERLAKSDVKYRFVI 351
E E++ + + ++++ ++D+IN +ERL K +V R V+
Sbjct: 314 ELHELVTLALQGKVRVEVDIHKLDEINDVLERLEKGEVLGRAVL 357
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 98/212 (46%), Gaps = 18/212 (8%)
Query: 34 ETGADDVTIKILFCGICHSDLHC---ARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90
E D+V +++ + GIC SD+H R + P+V GHE GTV KVG NV K+
Sbjct: 25 EPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKK 84
Query: 91 GDKVGV--GVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHY 148
GD+V V GV C++C+ C++G N CP+ LT+ + D G + V +
Sbjct: 85 GDRVAVEPGV---PCRRCQFCKEGKYNLCPD--LTFCATPPDD----GNLARYYVHAADF 135
Query: 149 VLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGL 208
+ PDN+ L+ GA L + V++ + + KA+G
Sbjct: 136 CHKLPDNVSLEEGALLEPLSVGVHACRR--AGVQLGTTVLVIGAGPIGLVSVLAAKAYGA 193
Query: 209 KVTVISTSPKKESEAISKLGADAFLVSSDPAK 240
V + SP++ E GAD LV DPAK
Sbjct: 194 FVVCTARSPRR-LEVAKNCGADVTLV-VDPAK 223
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 20/211 (9%)
Query: 39 DVTIKILFCGICHSDLHCARNEWGV--------TNYPIVPGHEIVGTVTKVGNNVSKFKE 90
V IK+ G+CHSD+H + +G P+ GHEI G + +VG+ V + +
Sbjct: 27 QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVL 150
GD V V L C C+ G E+ C +S G G Y++ ++V + +
Sbjct: 87 GDLVAVNPLQGEGN-CYYCRIGEEHLC-------DSPRWLGINFDGAYAEYVIVPHYKYM 138
Query: 151 RFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKV 210
+ APL C+GIT Y ++ + I KA
Sbjct: 139 YKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVS-GA 197
Query: 211 TVISTSPKKES-EAISKLGADAFLVSS--DP 238
T+I ++E+ EA + GAD + +S DP
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDP 228
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 38 DDVTIKILFCGICHSDL-HCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGV 96
D+V +KI G+C SDL +N G YPI GHE G + VG+ V GD V
Sbjct: 26 DEVRVKIASSGLCGSDLPRIFKN--GAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVAC 83
Query: 97 GVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNM 156
V + C C C +G + C D G++ GG+++ IVV + V P +M
Sbjct: 84 -VPLLPCFTCPECLKGFYSQCAKY-------DFIGSRRDGGFAEYIVVKRKNVFALPTDM 135
Query: 157 PLDAGA 162
P++ GA
Sbjct: 136 PIEDGA 141
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E +V IKIL GIC +D H + V+ +P++ GHE G V +G
Sbjct: 20 PFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTM-VSKFPVIVGHEATGIVESIGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTY-------- 135
V+ K GDKV + + + C++C +C+ N C +T + DGT +
Sbjct: 79 GVTTVKPGDKV-IPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVH 137
Query: 136 -----GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEP 183
+++ VVD+ V + D P + + C T Y G +P
Sbjct: 138 HFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKP 190
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E +V IKIL GIC +D H + V+ +P++ GHE G V +G
Sbjct: 20 PFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTM-VSKFPVIVGHEATGIVESIGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTY-------- 135
V+ K GDKV + + + C++C +C+ N C +T + DGT +
Sbjct: 79 GVTTVKPGDKV-IPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVH 137
Query: 136 -----GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEP 183
+++ VVD+ V + D P + + C T Y G +P
Sbjct: 138 HFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKP 190
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 20 DNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVT 79
++ G S + E G DD+ +K+ CGIC +D H E+ T P+ GHE G V
Sbjct: 30 ESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTP-PVTLGHEFCGIVV 88
Query: 80 KVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYS 139
+ G+ V G ++ G SC +C CQ G N C N L I RD GG++
Sbjct: 89 EAGSAVRDIAPGARI-TGDPNISCGRCPQCQAGRVNLCRN--LRAIGIHRD-----GGFA 140
Query: 140 DLIVVDQHYVLRFPDNMPLDAGA---PLLC 166
+ ++V + P + GA PL C
Sbjct: 141 EYVLVPRKQAFEIPLTLDPVHGAFCEPLAC 170
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 87/211 (41%), Gaps = 20/211 (9%)
Query: 39 DVTIKILFCGICHSDLHCARNEWGV--------TNYPIVPGHEIVGTVTKVGNNVSKFKE 90
V IK+ G+CHSD+H + +G P+ GHEI G + +VG+ V + +
Sbjct: 27 QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVL 150
GD V V C C+ G E+ C +S G G Y++ ++V + +
Sbjct: 87 GDLVAVNPWQGEGN-CYYCRIGEEHLC-------DSPRWLGINFDGAYAEYVIVPHYKYM 138
Query: 151 RFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKV 210
+ APL C+GIT Y ++ + I KA
Sbjct: 139 YKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVS-GA 197
Query: 211 TVISTSPKKES-EAISKLGADAFLVSS--DP 238
T+I ++E+ EA + GAD + +S DP
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDP 228
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 87/211 (41%), Gaps = 20/211 (9%)
Query: 39 DVTIKILFCGICHSDLHCARNEWGV--------TNYPIVPGHEIVGTVTKVGNNVSKFKE 90
V IK+ G+CHSD+H + +G P+ GHEI G + +VG+ V + +
Sbjct: 27 QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVL 150
GD V V C C+ G E+ C +S G G Y++ ++V + +
Sbjct: 87 GDLVAVNPWQGEGN-CYYCRIGEEHLC-------DSPRWLGINFDGAYAEYVIVPHYKYM 138
Query: 151 RFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKV 210
+ APL C+GIT Y ++ + I KA
Sbjct: 139 YKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVS-GA 197
Query: 211 TVISTSPKKES-EAISKLGADAFLVSS--DP 238
T+I ++E+ EA + GAD + +S DP
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDP 228
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 86/211 (40%), Gaps = 20/211 (9%)
Query: 39 DVTIKILFCGICHSDLHCARNEWGV--------TNYPIVPGHEIVGTVTKVGNNVSKFKE 90
V IKI G+CHSD+H + +G P+ GHEI G + +VG+ V + +
Sbjct: 27 QVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEVGDEVVGYSK 86
Query: 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVL 150
GD V V C C+ G E+ C +S G G Y++ ++V + L
Sbjct: 87 GDLVAVNPWEGEGN-CYYCRIGEEHLC-------DSPRWLGINYDGAYAEYVLVPHYKYL 138
Query: 151 RFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKV 210
+ APL C+G+T Y ++ + I KA
Sbjct: 139 YKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIAKAVS-GA 197
Query: 211 TVISTSPKKES-EAISKLGADAFL--VSSDP 238
T+I ++E+ EA + GAD + S DP
Sbjct: 198 TIIGVDVREEALEAAKRAGADYVINASSQDP 228
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 69/163 (42%), Gaps = 19/163 (11%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E A +V IK++ GIC SD H VT P++ GHE G V VG
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNL-VTPLPVILGHEAAGIVESVGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYC-PNMILTYNSIDRDGTKTY------- 135
V+ K GDKV + + C KC C+ NYC N + +DGT+ +
Sbjct: 79 GVTTVKPGDKV-IPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFTCSGKPI 137
Query: 136 ------GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVY 172
+S VVD++ V + PL+ + C T Y
Sbjct: 138 HHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 13/143 (9%)
Query: 36 GADDVTIKILFCGICHSDLH-----CARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90
G ++ +K+ G+CHSD+ A+ +G+ P+ GHE VGTV ++G V+ F
Sbjct: 24 GPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGL---PLTLGHEGVGTVAELGEGVTGFGV 80
Query: 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQ-HYV 149
GD V V C C +C +G ENYC I G + G ++ ++VD ++
Sbjct: 81 GDAVAV-YGPWGCGACHACARGRENYCTRA--ADLGITPPGLGSPGSMAEYMIVDSARHL 137
Query: 150 LRFPDNMPLDAGAPLLCAGITVY 172
+ D P+ A APL AG+T Y
Sbjct: 138 VPIGDLDPV-AAAPLTDAGLTPY 159
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 70/163 (42%), Gaps = 19/163 (11%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E A +V IK++ GICH+D H VT P++ GHE G V VG
Sbjct: 20 PFSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSGNL-VTPLPVILGHEAAGIVESVGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYC-PNMILTYNSIDRDGTKTY------- 135
V+ K GDKV + + C KC C+ NYC N + +DGT+ +
Sbjct: 79 GVTTVKPGDKV-IPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPI 137
Query: 136 ------GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVY 172
+S VVD++ V + PL+ + C T Y
Sbjct: 138 HHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 91/214 (42%), Gaps = 26/214 (12%)
Query: 39 DVTIKILFCGICHSDLHCARNEWGV--------TNYPIVPGHEIVGTVTKVGNNVSKFKE 90
V IK+ G+CHSD+H + +G P+ GHEI G + +VG+ V + +
Sbjct: 27 QVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQH--- 147
GD V V C C+ G E+ C +S G G Y++ ++V +
Sbjct: 87 GDLVAVNPWQGEGN-CYYCRIGEEHLC-------DSPRWLGINFDGAYAEYVIVPHYKYX 138
Query: 148 YVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFG 207
Y LR + + APL C+GIT Y ++ + I KA
Sbjct: 139 YKLRRLNAV---EAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQIAKAVS 195
Query: 208 LKVTVISTSPKKES-EAISKLGADAFLVSS--DP 238
T+I ++E+ EA + GAD + +S DP
Sbjct: 196 -GATIIGVDVREEAVEAAKRAGADYVINASMQDP 228
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 21/164 (12%)
Query: 37 ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGV 96
A+++ IKI+ G+CH+DL+ +P+V GHE G V VG V++F+ G+KV +
Sbjct: 33 ANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKV-I 91
Query: 97 GVLVASCQKCESCQ--------QGLENYCPNMILTYNS---------IDRDGTKTYGGYS 139
+ ++ C +C CQ +G N P+++ + + GT T+ Y+
Sbjct: 92 PLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYT 151
Query: 140 DLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEP 183
VV+Q V + + PLD L C T + EP
Sbjct: 152 ---VVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEP 192
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 69/163 (42%), Gaps = 19/163 (11%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E A +V IK++ GIC +D H VT P++ GHE G V VG
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTM-VTPLPVILGHEAAGIVESVGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYC-PNMILTYNSIDRDGTKTY------- 135
V+ K GDKV + + + C KC C+ NYC N + +DGT +
Sbjct: 79 GVTTVKPGDKV-IPLAIPQCGKCRICKNPESNYCLKNDVSNPQGTLQDGTSRFTCRRKPI 137
Query: 136 ------GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVY 172
+S VVD++ V + PL+ + C T Y
Sbjct: 138 HHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Query: 37 ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGV 96
A +V +K+ GIC SD H R YP V GHE G + VG V + G++V V
Sbjct: 44 AGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAV 103
Query: 97 GVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPD 154
+V SC C C G N C + + G GG+S+ VV + P+
Sbjct: 104 DPVV-SCGHCYPCSIGKPNVCTTLAVL-------GVHADGGFSEYAVVPAKNAWKIPE 153
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 69/163 (42%), Gaps = 19/163 (11%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E A +V IK++ GIC +D H VT P++ GHE G V VG
Sbjct: 20 PFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNL-VTPLPVILGHEAAGIVESVGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYC-PNMILTYNSIDRDGTKTY------- 135
V+ K GDKV + + C KC C+ NYC N + +DGT+ +
Sbjct: 79 GVTTVKPGDKV-IPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPI 137
Query: 136 ------GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVY 172
+S VVD++ V + PL+ + C T Y
Sbjct: 138 HHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 69/163 (42%), Gaps = 19/163 (11%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E A +V IK++ GIC +D H VT P++ GHE G V VG
Sbjct: 20 PFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNL-VTPLPVILGHEAAGIVESVGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYC-PNMILTYNSIDRDGTKTY------- 135
V+ K GDKV + + C KC C+ NYC N + +DGT+ +
Sbjct: 79 GVTTVKPGDKV-IPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPI 137
Query: 136 ------GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVY 172
+S VVD++ V + PL+ + C T Y
Sbjct: 138 HHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 11/125 (8%)
Query: 36 GADDVTIKILFCGICHSDLHCAR-NEWGVTNY--PIVPGHEIVGTVTKVGNNVSKFKEGD 92
G +V IK+L IC +DLH NEW + P + GHE+ G V ++G V + GD
Sbjct: 27 GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGD 86
Query: 93 KVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRF 152
V V + C KC +C++G + C N + +D DG +++ VV + +
Sbjct: 87 YVSVETHIV-CGKCYACRRGQYHVCQNTKIF--GVDTDGV-----FAEYAVVPAQNIWKN 138
Query: 153 PDNMP 157
P ++P
Sbjct: 139 PKSIP 143
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 11/125 (8%)
Query: 36 GADDVTIKILFCGICHSDLHCAR-NEWGVTNY--PIVPGHEIVGTVTKVGNNVSKFKEGD 92
G +V IK+L IC +DLH NEW + P + GHE+ G V ++G V + GD
Sbjct: 28 GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGD 87
Query: 93 KVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRF 152
V V + C KC +C++G + C N + +D DG +++ VV + +
Sbjct: 88 YVSVETHIV-CGKCYACRRGQYHVCQNTKIF--GVDTDGV-----FAEYAVVPAQNIWKN 139
Query: 153 PDNMP 157
P ++P
Sbjct: 140 PKSIP 144
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 129/331 (38%), Gaps = 26/331 (7%)
Query: 34 ETGADDVTIKILFCGICHSDLHCARNEWGVTNY--PIVPGHEIVGTVTKVGNNVSKFKEG 91
E ++V I+I G+C +DL + + PI+ GHE GT+ +VG ++K K+G
Sbjct: 25 EPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVG-ELAKVKKG 83
Query: 92 DKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSD-LIVVDQHYVL 150
D V V C C++G N C N I+ G T GG+S+ ++V +++
Sbjct: 84 DNVVVYATWGDLT-CRYCREGKFNICKNQIIP-------GQTTNGGFSEYMLVKSSRWLV 135
Query: 151 RFPDNMPLDAGAPLLCAGITVYSPMK-----YYGMTEPXXXXXXXXXXXXXXXXXXIGKA 205
+ P++A APL AG T ++ EP I KA
Sbjct: 136 KLNSLSPVEA-APLADAGTTSMGAIRQALPFISKFAEP--VVIVNGIGGLAVYTIQILKA 192
Query: 206 FGLKVTVISTS-PKKESEAISKLGADAFLVSSDPA----KVKAAMGTMDYIIDTVSAVHS 260
+T++ S KK + +LGAD D K+ +G ID V +
Sbjct: 193 LMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGA-SIAIDLVGTEET 251
Query: 261 LAPXXXXXXXXXXXXXXXXPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHN 320
K + + F + + GSN G + + ++++
Sbjct: 252 TYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGK 311
Query: 321 IAADIELVRMDQINTAMERLAKSDVKYRFVI 351
I I V +D IN A L + V R VI
Sbjct: 312 IKPYIIKVPLDDINKAFTNLDEGRVDGRQVI 342
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 69/163 (42%), Gaps = 19/163 (11%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E A +V IK++ GIC +D H VT P++ GHE G V VG
Sbjct: 20 PFSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVSGNL-VTPLPVILGHEAAGIVESVGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYC-PNMILTYNSIDRDGTKTY------- 135
V+ K GDKV + + C KC C+ NYC N + +DGT+ +
Sbjct: 79 GVTTVKPGDKV-IPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPI 137
Query: 136 ------GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVY 172
+S VVD++ V + PL+ + C T Y
Sbjct: 138 HHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 84/231 (36%), Gaps = 29/231 (12%)
Query: 39 DVTIKILFCGICHSDLHCARNEW-------GVTNYPIVPGHEIVGTVTKVGNNVSKFKEG 91
++ IK+ CGIC SD+H A+ + G+T +P+ GHE G V + G +
Sbjct: 57 EIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTN 116
Query: 92 DKVGVGVLVAS-----CQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQ 146
+ +G V + C C C +G N+C N+ + G G +++ + VD
Sbjct: 117 KRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENL-------NELGFNVDGAFAEYVKVDA 169
Query: 147 HYVLRFPDNMPLDAGAPLLCAGITVYSPMKYY-------GMTEPXXXXXXXXXXXXXXXX 199
Y + + G L AG V Y G P
Sbjct: 170 KYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAA 229
Query: 200 XXIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDY 250
I K G ++S + +LGAD + DP K +DY
Sbjct: 230 VAILKHAGASKVILSEPSEVRRNLAKELGADHVI---DPTKENFVEAVLDY 277
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 11/143 (7%)
Query: 34 ETGADDVTIKILFCGICHSDLHCAR-NEW--GVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90
E G ++ +++ IC +DLH + + W G P+V GHE G V VG V + +
Sbjct: 22 EPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQV 81
Query: 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVL 150
GD V + + C C +C+ G + C N + +DRD GG+++ +VV
Sbjct: 82 GDHVSLESHIV-CHACPACRTGNYHVCLNTQIL--GVDRD-----GGFAEYVVVPAENAW 133
Query: 151 RFPDNMPLDAGAPLLCAGITVYS 173
P ++P + A L G V++
Sbjct: 134 VNPKDLPFEVAAILEPFGNAVHT 156
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 67/163 (41%), Gaps = 19/163 (11%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E A +V IK++ GIC SD H VT P++ GHE G V +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYC-PNMILTYNSIDRDGTKTY------- 135
V+ + GDKV + + C KC C+ N+C N + +DGT +
Sbjct: 79 GVTTVRPGDKV-IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 136 ------GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVY 172
+S VVD+ V + PL+ + C T Y
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 73/174 (41%), Gaps = 20/174 (11%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E A +V IK++ GIC SD H VT P++ GHE G V +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYC-PNMILTYNSIDRDGTKTY------- 135
V+ + GDKV + + C KC C+ N+C N + +DGT +
Sbjct: 79 GVTTVRPGDKV-IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 136 ------GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVY-SPMKYYGMTE 182
+S VVD+ V + PL+ + C T Y S +K +T+
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 67/163 (41%), Gaps = 19/163 (11%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E A +V IK++ GIC SD H VT P++ GHE G V +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYC-PNMILTYNSIDRDGTKTY------- 135
V+ + GDKV + + C KC C+ N+C N + +DGT +
Sbjct: 79 GVTTVRPGDKV-IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 136 ------GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVY 172
+S VVD+ V + PL+ + C T Y
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 67/163 (41%), Gaps = 19/163 (11%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E A +V IK++ GIC SD H VT P++ GHE G V +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYC-PNMILTYNSIDRDGTKTY------- 135
V+ + GDKV + + C KC C+ N+C N + +DGT +
Sbjct: 79 GVTTVRPGDKV-IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 136 ------GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVY 172
+S VVD+ V + PL+ + C T Y
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 67/163 (41%), Gaps = 19/163 (11%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E A +V IK++ GIC SD H VT P++ GHE G V +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYC-PNMILTYNSIDRDGTKTY------- 135
V+ + GDKV + + C KC C+ N+C N + +DGT +
Sbjct: 79 GVTTVRPGDKV-IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 136 ------GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVY 172
+S VVD+ V + PL+ + C T Y
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 67/163 (41%), Gaps = 19/163 (11%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E A +V IK++ GIC SD H VT P++ GHE G V +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYC-PNMILTYNSIDRDGTKTY------- 135
V+ + GDKV + + C KC C+ N+C N + +DGT +
Sbjct: 79 GVTTVRPGDKV-IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 136 ------GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVY 172
+S VVD+ V + PL+ + C T Y
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 65/162 (40%), Gaps = 18/162 (11%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E A +V IK++ GIC SD H V P++ GHE G V +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTL-VAPLPVIAGHEAAGIVESIGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTY-------- 135
V+ + GDKV + + + C KC C+ N C + +DGT +
Sbjct: 79 GVTTVRPGDKV-IPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIH 137
Query: 136 -----GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVY 172
+S VVD+ V + PL+ + C T Y
Sbjct: 138 HFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGY 179
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 65/162 (40%), Gaps = 18/162 (11%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E A +V IK++ GIC SD H V P++ GHE G V +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTL-VAPLPVIAGHEAAGIVESIGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTY-------- 135
V+ + GDKV + + + C KC C+ N C + +DGT +
Sbjct: 79 GVTTVRPGDKV-IPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIH 137
Query: 136 -----GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVY 172
+S VVD+ V + PL+ + C T Y
Sbjct: 138 HFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGY 179
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 67/163 (41%), Gaps = 19/163 (11%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E A +V IK++ GIC SD H VT P++ GHE G V +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYC-PNMILTYNSIDRDGTKTY------- 135
V+ + GDKV + + C KC C+ N+C N + +DGT +
Sbjct: 79 GVTTVRPGDKV-IPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 136 ------GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVY 172
+S VVD+ V + PL+ + C T Y
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 67/163 (41%), Gaps = 19/163 (11%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E A +V IK++ GIC SD H VT P++ GHE G V +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYC-PNMILTYNSIDRDGTKTY------- 135
V+ + GDKV + + C KC C+ N+C N + +DGT +
Sbjct: 79 GVTTVRPGDKV-IPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 136 ------GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVY 172
+S VVD+ V + PL+ + C T Y
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 67/163 (41%), Gaps = 19/163 (11%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E A +V IK++ GIC SD H VT P++ GHE G V +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYC-PNMILTYNSIDRDGTKTY------- 135
V+ + GDKV + + C KC C+ N+C N + +DGT +
Sbjct: 79 GVTTVRPGDKV-IPLATPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 136 ------GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVY 172
+S VVD+ V + PL+ + C T Y
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 36 GADDVTIKILFCGICHSDLHCAR-NEWGVTNY--PIVPGHEIVGTVTKVGNNVSKFKEGD 92
G +V IK+L IC +DLH NEW + P + GHE+ G V +VG V + GD
Sbjct: 28 GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVEDLQVGD 87
Query: 93 KVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRF 152
+ V + C KC +C+ + C N + +D DG ++ +V +
Sbjct: 88 YISVETHIV-CGKCYACKHNRYHVCQNTKIF--GVDMDGV-----FAHYAIVPAKNAWKN 139
Query: 153 PDNMPLDAGA 162
P +MP + A
Sbjct: 140 PKDMPPEYAA 149
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 95/222 (42%), Gaps = 17/222 (7%)
Query: 40 VTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVL 99
+ ++IL G+C SD+H R E PI+ GHE G V +V N + G+ + G L
Sbjct: 45 ILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEV-NGEKRDLNGELLKPGDL 103
Query: 100 VA-----SCQKCESCQQGLENY-CPNMILTYNSIDRDGTKTY----GGYSDLIVVD-QHY 148
+ +C +C C+ E Y CPN I+R G Y G YS IV+D +
Sbjct: 104 IVWNRGITCGECYWCKVSKEPYLCPNR--KVYGINR-GCSEYPHLRGCYSSHIVLDPETD 160
Query: 149 VLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGL 208
VL+ + LD A +C+G T Y Y + I ++ G
Sbjct: 161 VLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGA 220
Query: 209 K-VTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMD 249
+ V VI+ SP + A ++GAD L + + + MD
Sbjct: 221 ENVIVIAGSPNRLKLA-EEIGADLTLNRRETSVEERRKAIMD 261
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 66/163 (40%), Gaps = 19/163 (11%)
Query: 27 PFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGN 83
PF E A +V IK++ GIC SD VT P++ GHE G V +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYC-PNMILTYNSIDRDGTKTY------- 135
V+ + GDKV + + C KC C+ N+C N + +DGT +
Sbjct: 79 GVTTVRPGDKV-IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 136 ------GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVY 172
+S VVD+ V + PL+ + C T Y
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 37 ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGV 96
A +V IKIL GIC SD + E + +P++ GHE VG V +G V+ K GDKV +
Sbjct: 34 AHEVRIKILASGICGSDSSVLK-EIIPSKFPVILGHEAVGVVESIGAGVTCVKPGDKV-I 91
Query: 97 GVLVASCQKCESCQQGLENYC 117
+ V C C +C+ N+C
Sbjct: 92 PLFVPQCGSCRACKSSNSNFC 112
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 11 QKAIGWAARDNTGTFSPFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYP 67
+ AI W T SP E A +V I+++ +CH+D++ A + +P
Sbjct: 10 KAAIAWK------TGSPLCIEEIEVSPPKACEVRIQVIATCVCHTDIN-ATDPKKKALFP 62
Query: 68 IVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMI-LTYNS 126
+V GHE G V VG V+ FK GDKV + C++C+ C L N C + Y +
Sbjct: 63 VVLGHECAGIVESVGPGVTNFKPGDKV-IPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPT 121
Query: 127 IDRD 130
ID++
Sbjct: 122 IDQE 125
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
Query: 34 ETGADDVTIKILFCGICHSDLHCARNEWG-----VTNYPIVPGHEIVGTVTKVGNNVSKF 88
E G ++V +++ GIC SD+H E+G + P+V GHE GTV KVG++V
Sbjct: 28 EPGPNEVLLRMHSVGICGSDVH--YWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHL 85
Query: 89 KEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHY 148
K GD+V + A + E C+ G N P++ D G + +
Sbjct: 86 KPGDRVAIEP-GAPRENDEFCKMGRYNLSPSIFFCATPPDD------GNLCRFYKHNAAF 138
Query: 149 VLRFPDNMPLDAGA 162
+ PDN+ + GA
Sbjct: 139 CYKLPDNVTFEEGA 152
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 33 RETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGD 92
R+ D+V +K++ G+CH+DL R++ P V GHE G + +G NV++ + GD
Sbjct: 27 RQPQGDEVLVKVVATGMCHTDL-IVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGD 85
Query: 93 KVGVGVLVASCQKCESCQQGLENYCPNMI-LTYNSIDRDGTKTYGGYSDLIVVDQHY 148
V + C KC C G YC ++ D +G + D VV+ H+
Sbjct: 86 HVVLS--YGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTH-DQGVVNDHF 139
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 65/161 (40%), Gaps = 15/161 (9%)
Query: 37 ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGV 96
A +V IKI+ +CH+D + +P++ GHE G V VG V+K K GD V +
Sbjct: 32 AHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTV-I 90
Query: 97 GVLVASCQKCESCQQGLENYCPNMILTY-NSIDRDGTKTY-------------GGYSDLI 142
+ + C +C+ C N C + +T + DGT + +S+
Sbjct: 91 PLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYT 150
Query: 143 VVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEP 183
VV V + PLD L C T Y EP
Sbjct: 151 VVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEP 191
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 37 ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGV 96
A +V IKIL+ +CH+D + + +P + GHE G V VG V++ + GD V +
Sbjct: 33 AGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHV-I 91
Query: 97 GVLVASCQKCESCQQGLENYC 117
A C++C+ C+ G N C
Sbjct: 92 PCYQAECRECKFCKSGKTNLC 112
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 65/161 (40%), Gaps = 15/161 (9%)
Query: 37 ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGV 96
A +V IKI+ +CH+D + +P++ GHE G V VG V+K K GD V +
Sbjct: 31 AHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTV-I 89
Query: 97 GVLVASCQKCESCQQGLENYCPNMILTY-NSIDRDGTKTY-------------GGYSDLI 142
+ + C +C+ C N C + +T + DGT + +S+
Sbjct: 90 PLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYT 149
Query: 143 VVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEP 183
VV V + PLD L C T Y EP
Sbjct: 150 VVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEP 190
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 65/161 (40%), Gaps = 15/161 (9%)
Query: 37 ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGV 96
A +V IKI+ +CH+D + +P++ GHE G V VG V+K K GD V +
Sbjct: 32 AHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTV-I 90
Query: 97 GVLVASCQKCESCQQGLENYCPNMILTY-NSIDRDGTKTY-------------GGYSDLI 142
+ + C +C+ C N C + +T + DGT + +S+
Sbjct: 91 PLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYT 150
Query: 143 VVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEP 183
VV V + PLD L C T Y EP
Sbjct: 151 VVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEP 191
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 37 ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGV 96
A +V +K+L+ +CH+D + + +P V GHE G V VG V++ + GD V +
Sbjct: 51 AGEVRVKVLYTALCHTDAYTWSGKDPEGLFPCVLGHEAAGIVESVGEGVTEVQPGDHV-I 109
Query: 97 GVLVASCQKCESCQQGLENYC 117
A C++C+ C+ G N C
Sbjct: 110 PCYQAECRECKFCKSGKTNLC 130
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 37 ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGV 96
A +V I+I+ +CH+D +++ +P++ GHE G V +G V+ K GDKV +
Sbjct: 35 AHEVRIQIIATSLCHTDATVIDSKFEGLAFPVIVGHEAAGIVESIGPGVTNVKPGDKV-I 93
Query: 97 GVLVASCQKCESCQQGLENYC 117
+ C+KC+ C L N C
Sbjct: 94 PLYAPLCRKCKFCLSPLTNLC 114
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 34 ETGADDVTIKILFCGICHSDLHC---ARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90
E G ++V +K+ GIC SD+H R V P+V GHE GTV KVG+ V +
Sbjct: 27 EPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVLGHEASGTVVKVGSLVRHLQP 86
Query: 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVL 150
GD+V + A Q E C+ G N P + D G + ++
Sbjct: 87 GDRVAIQP-GAPRQTDEFCKIGRYNLSPTIFFCATPPDD------GNLCRFYKHNANFCY 139
Query: 151 RFPDNMPLDAGA 162
+ PDN+ + GA
Sbjct: 140 KLPDNVTFEEGA 151
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 11 QKAIGWAARDNTGTFSPFHFSRRETG---ADDVTIKILFCGICHSDLHCARNEWGVTNYP 67
+ AI W T SP E A +V I+++ +C +D++ A + +P
Sbjct: 10 KAAIAWK------TGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDIN-ATDPKKKALFP 62
Query: 68 IVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMI-LTYNS 126
+V GHE G V VG V+ FK GDKV + C++C+ C L N C + Y +
Sbjct: 63 VVLGHECAGIVESVGPGVTNFKPGDKV-IPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPT 121
Query: 127 IDRD 130
ID++
Sbjct: 122 IDQE 125
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 14/134 (10%)
Query: 34 ETGADDVTIKILFCGICHSDLHCARNEWG-----VTNYPIVPGHEIVGTVTKVGNNVSKF 88
E G ++V ++ GIC SD+H E+G + P V GHE GTV KVG++V
Sbjct: 28 EPGPNEVLLRXHSVGICGSDVH--YWEYGRIGNFIVKKPXVLGHEASGTVEKVGSSVKHL 85
Query: 89 KEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHY 148
K GD+V + A + E C+ G N P++ D G + +
Sbjct: 86 KPGDRVAIEP-GAPRENDEFCKXGRYNLSPSIFFCATPPDD------GNLCRFYKHNAAF 138
Query: 149 VLRFPDNMPLDAGA 162
+ PDN+ + GA
Sbjct: 139 CYKLPDNVTFEEGA 152
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 64/161 (39%), Gaps = 15/161 (9%)
Query: 37 ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGV 96
A +V IKI+ +CH+D + +P++ GH G V VG V+K K GD V +
Sbjct: 31 AHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTV-I 89
Query: 97 GVLVASCQKCESCQQGLENYCPNMILTY-NSIDRDGTKTY-------------GGYSDLI 142
+ + C +C+ C N C + +T + DGT + +S+
Sbjct: 90 PLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYT 149
Query: 143 VVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEP 183
VV V + PLD L C T Y EP
Sbjct: 150 VVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEP 190
>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase
pdb|1KOL|B Chain B, Crystal Structure Of Formaldehyde Dehydrogenase
Length = 398
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 55/125 (44%), Gaps = 15/125 (12%)
Query: 40 VTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVL 99
V +K++ IC SD H R +V GHEI G V + G +V + GD V V
Sbjct: 36 VILKVVSTNICGSDQHMVRGRT-TAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFN 94
Query: 100 VASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTY-------GGYSDLIVV--DQHYVL 150
VA C +C SC++ C LT N G Y GG ++ ++V +L
Sbjct: 95 VA-CGRCRSCKEMHTGVC----LTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLL 149
Query: 151 RFPDN 155
+ PD
Sbjct: 150 KLPDR 154
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 80/202 (39%), Gaps = 17/202 (8%)
Query: 34 ETGADDVTIKILFCGICHSDLHCARNEWGVTN----YPIVPGHEIVGTVTKVGNNVSKFK 89
E G +V +++ + H D+ + GV + P V G + G V VG V F
Sbjct: 24 EPGPKEVRVRLKAAALNHLDVWVRK---GVASPKLPLPHVLGADGSGVVDAVGPGVEGFA 80
Query: 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYV 149
GD+V + + SC +CE C G +N CP + G +G Y++ +V+ + +
Sbjct: 81 PGDEVVINPGL-SCGRCERCLAGEDNLCPRYQIL-------GEHRHGTYAEYVVLPEANL 132
Query: 150 LRFPDNMPLDAGAPLLCAGITVYS-PMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGL 208
P N+ + A + +T + + G+ I K FG
Sbjct: 133 APKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA 192
Query: 209 KVTVISTSPKKESEAISKLGAD 230
+V + S K A LGAD
Sbjct: 193 RVIATAGSEDKLRRA-KALGAD 213
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 88/228 (38%), Gaps = 32/228 (14%)
Query: 16 WAARDNTGTFSP--FHFSRR---ETGADDVTIKILFCGICHSDLHCARNEWGV-TNYPIV 69
W +T T +P + R E G D+ ++ L + + D G+ +P V
Sbjct: 27 WXQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFV 86
Query: 70 PGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMI--LTYNSI 127
P + G V VG +V++F+ GD+V + + P + L +
Sbjct: 87 PASDXSGVVEAVGKSVTRFRPGDRV------------------ISTFAPGWLDGLRPGTG 128
Query: 128 DRDGTKTYGG-----YSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTE 182
+T GG S+ +V+ + + + P ++ + L CAG+T + + G
Sbjct: 129 RTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLR 188
Query: 183 PXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGAD 230
I KA G +V V S+S +K A + LGAD
Sbjct: 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA-LGAD 235
>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase
pdb|2DPH|B Chain B, Crystal Structure Of Formaldehyde Dismutase
Length = 398
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 40 VTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVL 99
V +K++ IC SD H R + V ++ GHEI G V + G++V GD V V
Sbjct: 35 VILKVVSTNICGSDQHIYRGRFIVPKGHVL-GHEITGEVVEKGSDVELMDIGDLVSVPFN 93
Query: 100 VASCQKCESCQQGLENYCPNMILT----YNSIDRDGTKTYGGYSDLIVVD--QHYVLRFP 153
VA C +C +C++ + C N ++ + D GG ++ ++V + +L+F
Sbjct: 94 VA-CGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFG 152
Query: 154 D 154
D
Sbjct: 153 D 153
>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of C. Beijerinckii
Adh By T. Brockii Adh
Length = 351
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 5/130 (3%)
Query: 31 SRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90
R G+ D ++ L C SD+H ++ GHE VG V +VG+ V FK
Sbjct: 18 ERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKP 77
Query: 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYN-SIDRDGTKTYGGYSDLIVVDQHYV 149
GD+V V + E Q G + + M+ + S +DG +G Y + D +
Sbjct: 78 GDRVIVPCTTPDWRSLE-VQAGFQQHSNGMLAGWKFSNFKDG--VFGEYFHVNDADMNLA 134
Query: 150 LRFPDNMPLD 159
+ P +MPL+
Sbjct: 135 I-LPKDMPLE 143
>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|B Chain B, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|C Chain C, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|D Chain D, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1BXZ|A Chain A, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|B Chain B, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|C Chain C, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|D Chain D, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
Length = 352
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 36 GADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVG 95
G D ++ L C SD+H + ++ GHE VG V +VG+ V FK GD+V
Sbjct: 23 GPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVV 82
Query: 96 VGVLVASCQKCESCQQGLENYCPNMILTYN-SIDRDGTKTYGGYSDLIVVDQHYVLRFPD 154
V + + E Q+G + M+ + S +DG +G + + D + + P
Sbjct: 83 VPAITPDWRTSE-VQRGYHQHSGGMLAGWKFSNVKDG--VFGEFFHVNDADMN-LAHLPK 138
Query: 155 NMPLDA 160
+PL+A
Sbjct: 139 EIPLEA 144
>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|B Chain B, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|C Chain C, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|D Chain D, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
Length = 352
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 36 GADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVG 95
G D ++ L C SD+H + ++ GHE VG V +VG+ V FK GD+V
Sbjct: 23 GPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVV 82
Query: 96 VGVLVASCQKCESCQQGLENYCPNMILTYN-SIDRDGTKTYGGYSDLIVVDQHYVLRFPD 154
V + + E Q+G + M+ + S +DG +G + + D + + P
Sbjct: 83 VPAITPDWRTSE-VQRGYHQHSGGMLAGWKFSNVKDG--VFGEFFHVNDADMN-LAHLPK 138
Query: 155 NMPLDA 160
+PL+A
Sbjct: 139 EIPLEA 144
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 32 RRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEG 91
R G+ D ++ L C SD+H ++ GHE VG V +VG+ V FK G
Sbjct: 19 RPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPG 78
Query: 92 DKVGVGVLVASCQKCESCQQGLENYCPNMILTYN-SIDRDGTKTYGGYSDLIVVDQHYVL 150
D+V V + E Q G + + M+ + S +DG +G Y + D + +
Sbjct: 79 DRVIVPCTTPDWRSLE-VQAGFQQHSNGMLAGWKFSNFKDG--VFGEYFHVNDADMNLAI 135
Query: 151 RFPDNMPLD 159
P +MPL+
Sbjct: 136 -LPKDMPLE 143
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 36 GADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVG 95
G D ++ L C SD+H + ++ GHE VG V +VG+ V FK GD+V
Sbjct: 23 GPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVV 82
Query: 96 VGVLVASCQKCESCQQGLENYCPNMILTYN-SIDRDGTKTYGGYSDLIVVDQHYVLRFPD 154
V + + E Q+G + M+ + S +DG +G + + D + + P
Sbjct: 83 VPAITPDWRTSE-VQRGYHQHSGGMLAGWKFSNVKDG--VFGEFFHVNDADMN-LAHLPK 138
Query: 155 NMPLDA 160
+PL+A
Sbjct: 139 EIPLEA 144
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 32 RRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEG 91
R G+ D ++ L C SD+H ++ GHE VG V +VG+ V FK G
Sbjct: 19 RPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPG 78
Query: 92 DKVGVGVLVASCQKCESCQQGLENYCPNMILTYN-SIDRDGTKTYGGYSDLIVVDQHYVL 150
D+V V + E Q G + + M+ + S +DG +G Y + D + +
Sbjct: 79 DRVIVPCTTPDWRSLE-VQAGFQQHSNGMLAGWKFSNFKDG--VFGEYFHVNDADMNLAI 135
Query: 151 RFPDNMPLD 159
P +MPL+
Sbjct: 136 -LPKDMPLE 143
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 36 GADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVG 95
G D ++ L C SD+H + ++ GHE VG V +VG+ V FK GD+V
Sbjct: 23 GPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVV 82
Query: 96 VGVLVASCQKCESCQQGLENYCPNMILTYN-SIDRDGTKTYGGYSDLIVVDQHYVLRFPD 154
V + + E Q+G + M+ + S +DG +G + + D + + P
Sbjct: 83 VPAITPDWRTSE-VQRGYHQHSGGMLAGWKFSNVKDG--VFGEFFHVNDADMN-LAHLPK 138
Query: 155 NMPLDA 160
+PL+A
Sbjct: 139 EIPLEA 144
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
Length = 352
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 36 GADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVG 95
G D ++ L C SD+H + ++ GHE VG V +VG+ V FK GD+V
Sbjct: 23 GPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVV 82
Query: 96 VGVLVASCQKCESCQQGLENYCPNMILTYN-SIDRDGTKTYGGYSDLIVVDQHYVLRFPD 154
V + + E Q+G + M+ + S +DG +G + + D + + P
Sbjct: 83 VPAITPDWRTSE-VQRGYHQHSGGMLAGWKFSNVKDG--VFGEFFHVNDADMN-LAHLPK 138
Query: 155 NMPLDA 160
+PL+A
Sbjct: 139 EIPLEA 144
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 5/129 (3%)
Query: 32 RRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEG 91
R G+ D ++ L C SD+H ++ GHE VG V +VG+ V FK G
Sbjct: 19 RPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPG 78
Query: 92 DKVGVGVLVASCQKCESCQQGLENYCPNMILTYN-SIDRDGTKTYGGYSDLIVVDQHYVL 150
D+V V + E Q G + M+ + S +DG +G Y + D + +
Sbjct: 79 DRVIVPCTTPDWRSLE-VQAGFPQHSNGMLAGWKFSNFKDG--VFGEYFHVNDADMNLAI 135
Query: 151 RFPDNMPLD 159
P +MPL+
Sbjct: 136 -LPKDMPLE 143
>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase
pdb|3M6I|B Chain B, L-Arabinitol 4-Dehydrogenase
Length = 363
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 34 ETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVP-----GHEIVGTVTKVGNNVSKF 88
E +VT+ + GIC SD+H ++ G IV GHE G V V +V
Sbjct: 37 ELKEGEVTVAVRSTGICGSDVHFWKH--GCIGPMIVECDHVLGHESAGEVIAVHPSVKSI 94
Query: 89 KEGDKVGVGVLVASCQKCESCQQGLENYC 117
K GD+V + V C CE C G N C
Sbjct: 95 KVGDRVAIEPQVI-CNACEPCLTGRYNGC 122
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 91/234 (38%), Gaps = 49/234 (20%)
Query: 12 KAIGWAA---RDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPI 68
KAIG+ + F F+ E ++ +KI + D + V+ P
Sbjct: 4 KAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVD--TKQRLMDVSKAPR 61
Query: 69 VPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYN-SI 127
V G + +G V VGN V+ F +GD I+ Y+ S
Sbjct: 62 VLGFDAIGVVESVGNEVTMFNQGD----------------------------IVYYSGSP 93
Query: 128 DRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPM-KYYGMT----- 181
D++G+ ++ ++++ V + P N+ + L GIT Y + +G++
Sbjct: 94 DQNGSN-----AEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNE 148
Query: 182 -EPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKES-EAISKLGADAFL 233
E I KA+GL+ VI+T+ + E+ E K+GAD L
Sbjct: 149 NEGKTLLIINGAGGVGSIATQIAKAYGLR--VITTASRNETIEWTKKMGADIVL 200
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 34 ETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDK 93
E G D ++ L C SD H + ++ GHE VG + KVG+ V + K GDK
Sbjct: 21 ECGPLDALVRPLALAPCTSDTHTVWAGAIGDRHDMILGHEAVGQIVKVGSLVKRLKVGDK 80
Query: 94 VGVGVLVASCQKCESCQQGLENYCPNMI 121
V V + + ES Q+G + M+
Sbjct: 81 VIVPAITPDWGEEES-QRGYPMHSGGML 107
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 34 ETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDK 93
E G D ++ L C SD H + ++ GHE VG + KVG+ V + K GDK
Sbjct: 21 ECGPLDALVRPLALAPCTSDTHTVWAGAIGDRHDMILGHEAVGQIVKVGSLVKRLKVGDK 80
Query: 94 VGVGVLVASCQKCESCQQGLENYCPNMI 121
V V + + ES Q+G + M+
Sbjct: 81 VIVPAITPDWGEEES-QRGYPMHSGGML 107
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 51/138 (36%), Gaps = 35/138 (25%)
Query: 39 DVTIKILFCGICHSDLHCARNEWGVTNY-PIVPGHEIVGTVTKVGNNVSKFKEGDKVGVG 97
V IK+ CG+ + + + P PG ++ G + VG+N S FK+GD+V
Sbjct: 59 QVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRV--- 115
Query: 98 VLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMP 157
T ++I GGY++ + H V + P+ +
Sbjct: 116 ------------------------FTSSTIS-------GGYAEYALAADHTVYKLPEKLD 144
Query: 158 LDAGAPLLCAGITVYSPM 175
GA + T Y +
Sbjct: 145 FKQGAAIGIPYFTAYRAL 162
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of
Human Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of
Human Fas Ii
Length = 344
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 39 DVTIKILFCGICHSDLHCARNEWGVT-NYPIVPGHEIVGTVTKVGNNVSKFKEGDKV 94
DV +K+L I SD++ + +G+ P V G+E V V VG+NV+ K GD V
Sbjct: 43 DVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWV 99
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 39 DVTIKILFCGICHSDLHCARNEWGVT-NYPIVPGHEIVGTVTKVGNNVSKFKEGDKV 94
DV +K+L I SD++ + +G+ P V G+E V V VG+NV+ K GD V
Sbjct: 56 DVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWV 112
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 64/172 (37%), Gaps = 39/172 (22%)
Query: 62 GVTNYPIVP---GHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCP 118
G+ P +P G E G V VG+ V++FK GD+V G
Sbjct: 50 GLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKVGDRVAYG--------------------- 88
Query: 119 NMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITV-YSPMKY 177
T G YS++ V+ + +++ D++ + A L+ G+TV Y +
Sbjct: 89 -------------TGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQT 135
Query: 178 YGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGA 229
Y + KA G K+ +SP+K + A LGA
Sbjct: 136 YQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHA-KALGA 186
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 39 DVTIKILFCGICHSDLHCAR-NEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKV 94
++ I++ CG+ DL + N P+VPG E G V +G++V ++ GD+V
Sbjct: 32 ELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRV 88
>pdb|4A2S|A Chain A, Structure Of The Engineered Retro-aldolase Ra95.5
Length = 258
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 208 LKVTVISTSPKKESEAISKLGADAFLVSS----DPAKVK 242
+KV + S + E E + KLG +AFL+SS +P K+K
Sbjct: 206 VKVAKLGISERNEIEELRKLGVNAFLISSSLMRNPEKIK 244
>pdb|4A2R|A Chain A, Structure Of The Engineered Retro-Aldolase Ra95.5-5
Length = 258
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 208 LKVTVISTSPKKESEAISKLGADAFLVSS----DPAKVK 242
+KV + S + E E + KLG +AFL+SS +P K+K
Sbjct: 206 VKVAKLGISERNEIEELRKLGVNAFLISSSLMRNPEKIK 244
>pdb|4A29|A Chain A, Structure Of The Engineered Retro-Aldolase Ra95.0
Length = 258
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 208 LKVTVISTSPKKESEAISKLGADAFLVSS----DPAKVK 242
+KV + S + E E + KLG +AFL+SS +P K+K
Sbjct: 206 VKVAKLGISERNEIEELRKLGVNAFLISSSLMRNPEKIK 244
>pdb|3TC6|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or63
Length = 258
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 208 LKVTVISTSPKKESEAISKLGADAFLVSS----DPAKVK 242
+KV + S + E E + KLG +AFL+ S +P K+K
Sbjct: 206 VKVAIAGISERNEIEELRKLGVNAFLIGSSLMRNPEKIK 244
>pdb|1RM8|A Chain A, Crystal Structure Of The Catalytic Domain Of Mmp-16MT3-
Mmp: Characterization Of Mt-Mmp Specific Features
Length = 169
Score = 27.7 bits (60), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 21/53 (39%)
Query: 24 TFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVG 76
TF +S E G DV I I+F H D E G + PG I G
Sbjct: 43 TFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGG 95
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase
Superfamily Protein From Novosphingobium
Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase
Superfamily Protein From Novosphingobium
Aromaticivorans
Length = 343
Score = 27.7 bits (60), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 67 PIVPGHEIVGTVTKVGNNVSKFKEGDKV 94
P + G ++ GTV VG V F+ GD V
Sbjct: 64 PAILGXDLAGTVVAVGPEVDSFRVGDAV 91
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,844,373
Number of Sequences: 62578
Number of extensions: 382841
Number of successful extensions: 1201
Number of sequences better than 100.0: 108
Number of HSP's better than 100.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 999
Number of HSP's gapped (non-prelim): 117
length of query: 359
length of database: 14,973,337
effective HSP length: 100
effective length of query: 259
effective length of database: 8,715,537
effective search space: 2257324083
effective search space used: 2257324083
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)