Query 018246
Match_columns 359
No_of_seqs 139 out of 1459
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 07:22:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018246.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018246hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 7.2E-68 1.6E-72 470.8 33.2 334 9-354 2-338 (339)
2 KOG0023 Alcohol dehydrogenase, 100.0 2.2E-63 4.8E-68 427.3 32.0 348 10-358 7-359 (360)
3 PLN02586 probable cinnamyl alc 100.0 8.1E-59 1.8E-63 432.3 37.9 356 1-356 1-356 (360)
4 KOG0024 Sorbitol dehydrogenase 100.0 9.6E-59 2.1E-63 399.7 29.7 334 9-355 3-354 (354)
5 PLN02178 cinnamyl-alcohol dehy 100.0 7.4E-55 1.6E-59 407.0 38.0 345 12-356 6-351 (375)
6 COG1062 AdhC Zn-dependent alco 100.0 3.8E-55 8.2E-60 380.8 29.6 328 20-352 10-365 (366)
7 PLN02514 cinnamyl-alcohol dehy 100.0 1.1E-52 2.4E-57 391.0 38.1 345 11-357 10-354 (357)
8 cd08281 liver_ADH_like1 Zinc-d 100.0 3.1E-51 6.8E-56 383.5 35.6 338 11-351 1-371 (371)
9 TIGR02822 adh_fam_2 zinc-bindi 100.0 3.3E-51 7.1E-56 376.9 34.2 315 23-351 13-328 (329)
10 PRK09880 L-idonate 5-dehydroge 100.0 5.1E-51 1.1E-55 378.2 34.1 332 9-353 3-343 (343)
11 KOG0022 Alcohol dehydrogenase, 100.0 1.1E-50 2.4E-55 347.2 29.7 329 20-352 15-374 (375)
12 cd08239 THR_DH_like L-threonin 100.0 2.2E-50 4.8E-55 373.7 34.1 329 11-353 1-339 (339)
13 COG0604 Qor NADPH:quinone redu 100.0 1.9E-50 4.2E-55 368.0 30.2 309 11-353 1-326 (326)
14 TIGR03451 mycoS_dep_FDH mycoth 100.0 1.5E-49 3.3E-54 370.5 35.5 337 10-352 1-357 (358)
15 PLN02740 Alcohol dehydrogenase 100.0 2.3E-49 4.9E-54 371.9 36.3 341 7-353 7-381 (381)
16 PLN02827 Alcohol dehydrogenase 100.0 4.7E-49 1E-53 368.9 37.0 337 10-354 12-377 (378)
17 COG1063 Tdh Threonine dehydrog 100.0 3.8E-49 8.2E-54 364.2 34.1 324 25-353 13-350 (350)
18 TIGR02818 adh_III_F_hyde S-(hy 100.0 8E-49 1.7E-53 366.6 36.0 337 11-353 2-368 (368)
19 cd08277 liver_alcohol_DH_like 100.0 3.6E-48 7.9E-53 362.0 36.5 336 10-352 2-365 (365)
20 cd08301 alcohol_DH_plants Plan 100.0 3.8E-48 8.1E-53 362.6 35.8 336 10-351 2-368 (369)
21 TIGR03201 dearomat_had 6-hydro 100.0 2.9E-48 6.3E-53 360.6 34.3 318 24-352 10-348 (349)
22 cd08230 glucose_DH Glucose deh 100.0 3.6E-48 7.8E-53 360.9 33.3 329 11-353 1-355 (355)
23 cd08300 alcohol_DH_class_III c 100.0 1.4E-47 2.9E-52 358.5 36.3 337 10-352 2-368 (368)
24 TIGR02819 fdhA_non_GSH formald 100.0 2.3E-47 5.1E-52 358.1 35.0 336 10-354 2-391 (393)
25 cd08296 CAD_like Cinnamyl alco 100.0 6.2E-47 1.3E-51 349.7 35.5 331 11-352 1-333 (333)
26 KOG1197 Predicted quinone oxid 100.0 5E-48 1.1E-52 321.2 24.2 311 11-358 9-335 (336)
27 PRK10309 galactitol-1-phosphat 100.0 8.5E-47 1.8E-51 350.7 34.5 328 11-353 1-346 (347)
28 cd05283 CAD1 Cinnamyl alcohol 100.0 7.9E-46 1.7E-50 342.9 35.0 333 18-352 5-337 (337)
29 cd08237 ribitol-5-phosphate_DH 100.0 8.4E-47 1.8E-51 349.4 28.4 311 21-354 10-340 (341)
30 cd08231 MDR_TM0436_like Hypoth 100.0 1.8E-45 4E-50 343.6 35.8 337 12-353 2-361 (361)
31 cd08233 butanediol_DH_like (2R 100.0 3.4E-45 7.3E-50 340.6 33.7 327 11-351 1-350 (351)
32 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.9E-44 4E-49 329.1 28.5 299 11-352 2-308 (308)
33 PRK10083 putative oxidoreducta 100.0 2.3E-43 4.9E-48 326.8 34.3 330 11-355 1-339 (339)
34 PRK09422 ethanol-active dehydr 100.0 5E-43 1.1E-47 324.4 36.0 331 11-354 1-337 (338)
35 cd05284 arabinose_DH_like D-ar 100.0 2.6E-43 5.7E-48 326.5 33.6 331 11-353 1-340 (340)
36 cd08246 crotonyl_coA_red croto 100.0 1E-42 2.2E-47 328.6 33.9 338 7-353 9-393 (393)
37 cd08238 sorbose_phosphate_red 100.0 5.5E-43 1.2E-47 331.5 31.7 320 11-355 3-370 (410)
38 cd08285 NADP_ADH NADP(H)-depen 100.0 1.2E-42 2.6E-47 323.5 33.3 333 11-353 1-351 (351)
39 cd08240 6_hydroxyhexanoate_dh_ 100.0 2.8E-42 6.1E-47 320.8 33.4 331 11-352 1-349 (350)
40 cd08283 FDH_like_1 Glutathione 100.0 5.3E-42 1.1E-46 322.6 34.9 336 11-352 1-385 (386)
41 TIGR01751 crot-CoA-red crotony 100.0 6.8E-42 1.5E-46 323.2 34.6 341 7-356 4-390 (398)
42 cd08299 alcohol_DH_class_I_II_ 100.0 1.2E-41 2.5E-46 318.7 35.1 336 10-352 7-372 (373)
43 cd08278 benzyl_alcohol_DH Benz 100.0 1.3E-41 2.8E-46 317.8 35.5 336 10-352 2-365 (365)
44 cd08260 Zn_ADH6 Alcohol dehydr 100.0 1.3E-41 2.7E-46 315.9 35.1 331 11-352 1-344 (345)
45 cd08291 ETR_like_1 2-enoyl thi 100.0 2.3E-42 5E-47 318.0 29.7 303 11-352 1-324 (324)
46 PRK13771 putative alcohol dehy 100.0 8.9E-42 1.9E-46 315.5 33.0 328 11-353 1-333 (334)
47 cd08297 CAD3 Cinnamyl alcohol 100.0 1.9E-41 4.1E-46 314.2 35.2 333 11-353 1-341 (341)
48 cd05279 Zn_ADH1 Liver alcohol 100.0 6.6E-41 1.4E-45 313.0 35.3 327 20-351 8-364 (365)
49 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 4E-41 8.7E-46 311.5 33.6 333 11-353 1-338 (338)
50 PLN03154 putative allyl alcoho 100.0 2.8E-41 6.1E-46 313.1 32.3 295 23-356 25-348 (348)
51 cd05278 FDH_like Formaldehyde 100.0 4.4E-41 9.6E-46 312.4 33.6 333 11-353 1-347 (347)
52 cd08256 Zn_ADH2 Alcohol dehydr 100.0 4E-41 8.8E-46 313.1 33.0 328 11-351 1-350 (350)
53 cd08279 Zn_ADH_class_III Class 100.0 1.3E-40 2.7E-45 311.1 35.4 335 11-350 1-362 (363)
54 cd08245 CAD Cinnamyl alcohol d 100.0 8.4E-41 1.8E-45 308.5 33.7 323 20-351 7-330 (330)
55 cd08298 CAD2 Cinnamyl alcohol 100.0 1.2E-40 2.6E-45 307.3 33.4 326 11-351 1-329 (329)
56 cd08259 Zn_ADH5 Alcohol dehydr 100.0 2.6E-40 5.5E-45 305.3 34.7 328 11-352 1-332 (332)
57 cd08286 FDH_like_ADH2 formalde 100.0 2.7E-40 5.8E-45 307.0 34.4 331 11-353 1-345 (345)
58 cd08282 PFDH_like Pseudomonas 100.0 3.2E-40 7E-45 309.5 35.2 333 11-352 1-374 (375)
59 cd08261 Zn_ADH7 Alcohol dehydr 100.0 4.3E-40 9.2E-45 304.7 34.4 328 11-353 1-337 (337)
60 KOG0025 Zn2+-binding dehydroge 100.0 6.2E-41 1.3E-45 283.9 26.1 314 6-354 15-353 (354)
61 cd08264 Zn_ADH_like2 Alcohol d 100.0 2E-40 4.3E-45 305.3 31.8 321 11-349 1-324 (325)
62 PRK05396 tdh L-threonine 3-deh 100.0 3.1E-40 6.7E-45 306.1 32.2 329 11-354 1-341 (341)
63 cd08266 Zn_ADH_like1 Alcohol d 100.0 6.3E-40 1.4E-44 303.4 33.6 333 11-353 1-342 (342)
64 cd08263 Zn_ADH10 Alcohol dehyd 100.0 5.2E-40 1.1E-44 307.4 33.0 337 11-352 1-367 (367)
65 cd08242 MDR_like Medium chain 100.0 6.6E-40 1.4E-44 301.1 32.3 314 11-352 1-318 (319)
66 cd08295 double_bond_reductase_ 100.0 3.4E-40 7.4E-45 305.4 29.8 302 11-353 8-338 (338)
67 cd08235 iditol_2_DH_like L-idi 100.0 1.5E-39 3.2E-44 301.8 33.6 327 11-352 1-343 (343)
68 cd08284 FDH_like_2 Glutathione 100.0 2.5E-39 5.5E-44 300.3 35.1 330 11-352 1-343 (344)
69 cd08262 Zn_ADH8 Alcohol dehydr 100.0 1.6E-39 3.4E-44 301.3 33.5 317 11-352 1-341 (341)
70 cd08265 Zn_ADH3 Alcohol dehydr 100.0 8.3E-40 1.8E-44 307.6 31.9 317 24-351 38-383 (384)
71 cd08274 MDR9 Medium chain dehy 100.0 1.2E-39 2.5E-44 303.2 31.8 323 11-353 1-350 (350)
72 cd08287 FDH_like_ADH3 formalde 100.0 2.6E-39 5.7E-44 300.3 34.1 327 11-352 1-344 (345)
73 TIGR03366 HpnZ_proposed putati 100.0 2.7E-40 5.9E-45 297.8 26.5 262 69-333 1-280 (280)
74 PLN02702 L-idonate 5-dehydroge 100.0 5.1E-39 1.1E-43 300.4 36.1 321 21-352 25-363 (364)
75 cd08292 ETR_like_2 2-enoyl thi 100.0 8.5E-40 1.8E-44 300.9 30.2 304 11-352 1-324 (324)
76 cd08232 idonate-5-DH L-idonate 100.0 2.6E-39 5.7E-44 299.6 33.1 325 21-353 5-339 (339)
77 cd05285 sorbitol_DH Sorbitol d 100.0 4.9E-39 1.1E-43 298.3 33.3 320 21-351 6-341 (343)
78 TIGR02825 B4_12hDH leukotriene 100.0 3E-39 6.4E-44 297.5 29.3 289 18-352 12-325 (325)
79 cd08236 sugar_DH NAD(P)-depend 100.0 9.6E-39 2.1E-43 296.3 32.8 326 11-351 1-343 (343)
80 cd08293 PTGR2 Prostaglandin re 100.0 7.6E-39 1.7E-43 297.2 30.9 294 22-353 20-345 (345)
81 cd08294 leukotriene_B4_DH_like 100.0 1.8E-38 3.8E-43 292.8 30.0 298 10-353 2-329 (329)
82 cd05281 TDH Threonine dehydrog 100.0 8.5E-38 1.8E-42 289.7 32.0 327 11-352 1-340 (341)
83 cd08234 threonine_DH_like L-th 100.0 2E-37 4.3E-42 286.4 33.0 324 11-351 1-333 (334)
84 cd08258 Zn_ADH4 Alcohol dehydr 100.0 8.1E-38 1.8E-42 285.4 29.6 298 11-319 1-306 (306)
85 TIGR02817 adh_fam_1 zinc-bindi 100.0 1.1E-37 2.3E-42 288.4 30.2 297 20-352 12-334 (336)
86 TIGR00692 tdh L-threonine 3-de 100.0 2.8E-37 6.1E-42 286.1 32.1 320 21-353 7-340 (340)
87 cd08276 MDR7 Medium chain dehy 100.0 3.5E-37 7.6E-42 284.7 32.6 327 11-353 1-336 (336)
88 cd08290 ETR 2-enoyl thioester 100.0 1.5E-37 3.2E-42 288.1 29.5 307 11-353 1-341 (341)
89 cd08244 MDR_enoyl_red Possible 100.0 4.1E-37 8.8E-42 283.0 31.9 307 11-353 1-324 (324)
90 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 1.1E-36 2.5E-41 280.2 31.9 310 11-353 1-325 (325)
91 PTZ00354 alcohol dehydrogenase 100.0 8.8E-37 1.9E-41 281.9 31.3 310 10-356 1-331 (334)
92 cd08270 MDR4 Medium chain dehy 100.0 1.2E-36 2.6E-41 277.5 31.0 296 11-353 1-305 (305)
93 PRK10754 quinone oxidoreductas 100.0 5.3E-37 1.2E-41 282.8 28.3 306 10-352 1-326 (327)
94 TIGR02823 oxido_YhdH putative 100.0 4.3E-36 9.4E-41 276.2 31.5 309 12-353 1-323 (323)
95 KOG1198 Zinc-binding oxidoredu 100.0 1.1E-36 2.4E-41 277.6 26.0 297 21-354 16-346 (347)
96 cd05282 ETR_like 2-enoyl thioe 100.0 4.2E-36 9.1E-41 276.1 29.4 292 24-352 13-323 (323)
97 cd08250 Mgc45594_like Mgc45594 100.0 1.4E-35 2.9E-40 273.6 30.5 301 11-352 2-329 (329)
98 cd08289 MDR_yhfp_like Yhfp put 100.0 1.2E-35 2.6E-40 273.5 30.0 310 11-353 1-326 (326)
99 cd08243 quinone_oxidoreductase 100.0 1.7E-35 3.6E-40 271.6 30.5 308 11-351 1-319 (320)
100 COG2130 Putative NADP-dependen 100.0 1.2E-35 2.6E-40 254.3 26.1 291 22-355 24-340 (340)
101 cd08252 AL_MDR Arginate lyase 100.0 2.6E-35 5.6E-40 272.5 30.3 307 11-352 1-336 (336)
102 cd08249 enoyl_reductase_like e 100.0 1.4E-35 3.1E-40 274.5 28.4 306 11-353 1-339 (339)
103 cd08269 Zn_ADH9 Alcohol dehydr 100.0 9.8E-35 2.1E-39 265.7 30.6 291 21-351 3-311 (312)
104 cd08288 MDR_yhdh Yhdh putative 100.0 2.4E-34 5.3E-39 264.6 31.7 310 11-353 1-324 (324)
105 cd08248 RTN4I1 Human Reticulon 100.0 1.5E-34 3.2E-39 269.0 29.7 307 11-352 1-350 (350)
106 cd08253 zeta_crystallin Zeta-c 100.0 2.4E-34 5.2E-39 264.0 30.4 311 11-353 1-325 (325)
107 cd05276 p53_inducible_oxidored 100.0 3.2E-34 6.9E-39 262.8 30.4 304 11-351 1-323 (323)
108 cd05188 MDR Medium chain reduc 100.0 4.8E-34 1E-38 255.5 27.0 265 39-316 1-271 (271)
109 cd05286 QOR2 Quinone oxidoredu 100.0 2.4E-33 5.2E-38 256.6 31.8 294 21-352 10-319 (320)
110 cd05288 PGDH Prostaglandin deh 100.0 1.1E-33 2.4E-38 260.9 29.1 289 21-351 16-329 (329)
111 cd08273 MDR8 Medium chain dehy 100.0 1.3E-33 2.9E-38 260.5 29.6 301 12-351 2-330 (331)
112 cd08272 MDR6 Medium chain dehy 100.0 3.5E-33 7.5E-38 256.6 30.3 307 11-353 1-326 (326)
113 TIGR02824 quinone_pig3 putativ 100.0 1.4E-32 2.9E-37 252.5 31.4 306 11-353 1-325 (325)
114 cd08271 MDR5 Medium chain dehy 100.0 8.1E-33 1.7E-37 254.3 28.7 308 11-353 1-325 (325)
115 cd05289 MDR_like_2 alcohol deh 100.0 6.6E-33 1.4E-37 252.8 27.6 302 11-351 1-309 (309)
116 cd08247 AST1_like AST1 is a cy 100.0 1.5E-32 3.2E-37 255.7 29.0 310 12-353 2-352 (352)
117 cd08268 MDR2 Medium chain dehy 100.0 4.4E-32 9.6E-37 249.4 31.3 311 11-353 1-328 (328)
118 cd08241 QOR1 Quinone oxidoredu 100.0 7.7E-32 1.7E-36 247.1 29.6 304 11-352 1-323 (323)
119 cd08267 MDR1 Medium chain dehy 100.0 5.1E-32 1.1E-36 248.3 27.9 298 19-351 6-319 (319)
120 cd08251 polyketide_synthase po 100.0 1.2E-31 2.6E-36 243.9 27.7 283 32-351 2-303 (303)
121 cd08275 MDR3 Medium chain dehy 100.0 6.5E-31 1.4E-35 242.8 30.6 295 21-353 10-337 (337)
122 cd05195 enoyl_red enoyl reduct 100.0 1.9E-30 4E-35 234.2 26.4 273 38-351 1-293 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 4.7E-30 1E-34 231.3 24.8 268 42-351 2-288 (288)
124 cd08255 2-desacetyl-2-hydroxye 100.0 1.9E-28 4E-33 220.6 23.5 248 59-351 14-277 (277)
125 KOG1196 Predicted NAD-dependen 100.0 3.4E-27 7.4E-32 201.8 23.1 283 33-356 33-343 (343)
126 KOG1202 Animal-type fatty acid 100.0 4.9E-28 1.1E-32 235.7 18.3 290 21-357 1425-1745(2376)
127 PF08240 ADH_N: Alcohol dehydr 99.9 9.6E-24 2.1E-28 162.3 9.8 108 37-152 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 3.2E-17 6.9E-22 130.2 14.0 124 194-318 1-130 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.6 1E-13 2.2E-18 128.9 15.3 173 172-354 189-377 (413)
130 PF13602 ADH_zinc_N_2: Zinc-bi 99.5 4.2E-14 9E-19 111.8 6.7 117 227-351 1-127 (127)
131 PRK09424 pntA NAD(P) transhydr 99.4 5.6E-12 1.2E-16 120.3 16.2 141 182-323 163-334 (509)
132 PRK11873 arsM arsenite S-adeno 98.8 6E-08 1.3E-12 87.0 11.6 165 180-350 74-258 (272)
133 PRK05476 S-adenosyl-L-homocyst 98.7 4.5E-07 9.7E-12 85.1 14.3 107 169-283 196-304 (425)
134 TIGR00561 pntA NAD(P) transhyd 98.7 2.8E-07 6.1E-12 88.1 13.1 121 182-303 162-313 (511)
135 PRK08306 dipicolinate synthase 98.7 9.2E-07 2E-11 79.9 15.8 120 174-300 142-261 (296)
136 TIGR00936 ahcY adenosylhomocys 98.5 2.1E-06 4.6E-11 80.1 12.8 103 171-281 181-285 (406)
137 TIGR00518 alaDH alanine dehydr 98.4 2.7E-06 5.9E-11 79.3 12.5 99 183-281 166-270 (370)
138 TIGR01035 hemA glutamyl-tRNA r 98.4 2.1E-08 4.5E-13 95.1 -1.6 163 69-259 89-252 (417)
139 PLN02494 adenosylhomocysteinas 98.4 3.2E-06 6.9E-11 79.7 12.8 102 172-281 241-344 (477)
140 PRK00517 prmA ribosomal protei 98.3 7.5E-06 1.6E-10 72.4 11.7 129 138-280 79-215 (250)
141 PRK12771 putative glutamate sy 98.3 3.5E-07 7.5E-12 90.6 3.4 121 181-303 134-277 (564)
142 TIGR02853 spore_dpaA dipicolin 98.3 2.6E-05 5.7E-10 70.1 13.8 111 182-299 149-259 (287)
143 cd05213 NAD_bind_Glutamyl_tRNA 98.3 3.9E-06 8.4E-11 76.6 8.6 109 147-260 139-251 (311)
144 PTZ00075 Adenosylhomocysteinas 98.1 2.4E-05 5.2E-10 74.1 11.2 98 176-281 246-344 (476)
145 COG4221 Short-chain alcohol de 98.1 5.2E-05 1.1E-09 64.9 11.6 105 183-287 5-148 (246)
146 PF01488 Shikimate_DH: Shikima 98.1 8E-06 1.7E-10 64.9 5.9 96 182-280 10-111 (135)
147 PRK08324 short chain dehydroge 98.1 3.4E-05 7.3E-10 78.2 11.5 135 136-281 385-560 (681)
148 PRK00045 hemA glutamyl-tRNA re 97.8 0.00014 3E-09 69.3 9.7 160 69-259 91-254 (423)
149 COG0686 Ald Alanine dehydrogen 97.7 0.00023 5.1E-09 62.8 9.4 98 185-282 169-272 (371)
150 COG1748 LYS9 Saccharopine dehy 97.7 0.00042 9.1E-09 64.2 11.3 99 185-283 2-104 (389)
151 PRK00377 cbiT cobalt-precorrin 97.7 0.00094 2E-08 56.8 12.3 97 180-277 37-144 (198)
152 COG2242 CobL Precorrin-6B meth 97.7 0.001 2.2E-08 54.8 11.6 96 181-278 32-135 (187)
153 PF00670 AdoHcyase_NAD: S-aden 97.7 0.00066 1.4E-08 54.9 10.3 103 178-290 17-120 (162)
154 PLN03209 translocon at the inn 97.6 0.0008 1.7E-08 65.5 12.6 104 178-281 74-210 (576)
155 PF12847 Methyltransf_18: Meth 97.6 0.0006 1.3E-08 52.0 9.4 93 183-277 1-110 (112)
156 COG0300 DltE Short-chain dehyd 97.6 0.00072 1.6E-08 59.5 10.6 77 182-258 4-95 (265)
157 TIGR00406 prmA ribosomal prote 97.5 0.001 2.2E-08 60.1 11.3 96 182-280 158-261 (288)
158 PRK12742 oxidoreductase; Provi 97.5 0.0012 2.7E-08 57.5 11.3 99 183-281 5-134 (237)
159 PF13460 NAD_binding_10: NADH( 97.5 0.00083 1.8E-08 56.1 9.7 91 187-280 1-99 (183)
160 PF02826 2-Hacid_dh_C: D-isome 97.5 0.00041 8.9E-09 57.9 7.6 119 182-332 34-158 (178)
161 COG3967 DltE Short-chain dehyd 97.5 0.00051 1.1E-08 57.1 7.8 75 183-257 4-88 (245)
162 PRK05786 fabG 3-ketoacyl-(acyl 97.5 0.0016 3.5E-08 56.8 11.2 99 183-281 4-138 (238)
163 KOG1209 1-Acyl dihydroxyaceton 97.4 0.002 4.3E-08 53.9 10.5 107 183-289 6-149 (289)
164 COG2518 Pcm Protein-L-isoaspar 97.4 0.0014 3.1E-08 55.2 9.4 102 174-279 64-170 (209)
165 TIGR01809 Shik-DH-AROM shikima 97.4 0.00096 2.1E-08 60.0 9.0 77 183-259 124-202 (282)
166 cd01065 NAD_bind_Shikimate_DH 97.4 0.0026 5.7E-08 51.6 10.9 106 173-281 8-119 (155)
167 cd01078 NAD_bind_H4MPT_DH NADP 97.4 0.0026 5.6E-08 53.9 11.2 99 183-281 27-132 (194)
168 cd01080 NAD_bind_m-THF_DH_Cycl 97.4 0.0029 6.2E-08 52.1 11.0 98 161-281 21-119 (168)
169 PRK05693 short chain dehydroge 97.4 0.0036 7.8E-08 56.0 12.6 72 185-257 2-82 (274)
170 PRK06182 short chain dehydroge 97.4 0.0024 5.1E-08 57.1 11.4 74 183-257 2-84 (273)
171 PRK11705 cyclopropane fatty ac 97.4 0.0017 3.7E-08 61.0 10.8 112 163-278 147-267 (383)
172 PRK08265 short chain dehydroge 97.3 0.004 8.6E-08 55.3 11.9 75 183-257 5-90 (261)
173 PF01262 AlaDh_PNT_C: Alanine 97.3 0.00058 1.3E-08 56.4 6.0 98 183-281 19-142 (168)
174 KOG1205 Predicted dehydrogenas 97.3 0.0022 4.8E-08 56.9 9.8 106 183-288 11-159 (282)
175 PRK05993 short chain dehydroge 97.3 0.0044 9.6E-08 55.6 12.1 74 183-257 3-86 (277)
176 COG0373 HemA Glutamyl-tRNA red 97.3 0.0066 1.4E-07 56.8 13.0 95 183-281 177-277 (414)
177 PRK14175 bifunctional 5,10-met 97.2 0.0034 7.4E-08 55.9 10.7 97 162-281 136-233 (286)
178 PRK12549 shikimate 5-dehydroge 97.2 0.0014 3.1E-08 58.9 8.4 106 171-279 114-228 (284)
179 PRK12548 shikimate 5-dehydroge 97.2 0.003 6.4E-08 57.1 10.4 99 182-280 124-238 (289)
180 COG0169 AroE Shikimate 5-dehyd 97.2 0.0018 3.9E-08 57.8 8.6 108 171-279 111-227 (283)
181 TIGR02469 CbiT precorrin-6Y C5 97.2 0.008 1.7E-07 46.4 11.4 97 181-278 17-122 (124)
182 PF03435 Saccharop_dh: Sacchar 97.2 0.0023 5E-08 60.4 9.8 92 187-278 1-98 (386)
183 PRK05872 short chain dehydroge 97.2 0.0035 7.5E-08 56.9 10.5 75 183-257 8-95 (296)
184 PRK07109 short chain dehydroge 97.2 0.0074 1.6E-07 55.8 12.8 75 183-257 7-95 (334)
185 PRK13940 glutamyl-tRNA reducta 97.2 0.0038 8.2E-08 59.1 10.9 75 182-259 179-254 (414)
186 PRK00258 aroE shikimate 5-dehy 97.2 0.0024 5.2E-08 57.4 9.2 111 168-280 106-223 (278)
187 TIGR01318 gltD_gamma_fam gluta 97.1 0.00073 1.6E-08 65.4 5.8 77 182-259 139-238 (467)
188 PRK13943 protein-L-isoaspartat 97.1 0.0058 1.3E-07 55.8 11.1 96 180-277 77-179 (322)
189 PRK07060 short chain dehydroge 97.1 0.0042 9.1E-08 54.4 10.0 75 183-257 8-87 (245)
190 PRK03369 murD UDP-N-acetylmura 97.1 0.0025 5.4E-08 62.1 9.2 72 182-258 10-81 (488)
191 PRK06139 short chain dehydroge 97.1 0.0043 9.3E-08 57.2 10.3 75 183-257 6-94 (330)
192 COG2264 PrmA Ribosomal protein 97.1 0.0086 1.9E-07 53.6 11.6 129 146-282 129-267 (300)
193 PRK12939 short chain dehydroge 97.1 0.0073 1.6E-07 52.9 11.4 75 183-257 6-94 (250)
194 PRK08261 fabG 3-ketoacyl-(acyl 97.1 0.0088 1.9E-07 57.7 12.7 75 183-257 209-294 (450)
195 cd01075 NAD_bind_Leu_Phe_Val_D 97.1 0.0095 2.1E-07 50.6 11.3 89 182-278 26-114 (200)
196 PRK14027 quinate/shikimate deh 97.1 0.0054 1.2E-07 55.1 10.2 75 182-257 125-204 (283)
197 PRK07326 short chain dehydroge 97.1 0.008 1.7E-07 52.3 11.2 75 183-257 5-92 (237)
198 TIGR00507 aroE shikimate 5-deh 97.0 0.0049 1.1E-07 55.1 9.8 108 169-281 102-217 (270)
199 PRK08618 ornithine cyclodeamin 97.0 0.0058 1.3E-07 56.2 10.5 106 176-288 120-232 (325)
200 TIGR01470 cysG_Nterm siroheme 97.0 0.016 3.5E-07 49.4 12.5 114 183-301 8-124 (205)
201 PRK06484 short chain dehydroge 97.0 0.0097 2.1E-07 58.5 12.7 100 182-281 267-403 (520)
202 PRK06718 precorrin-2 dehydroge 97.0 0.0026 5.7E-08 54.1 7.5 95 183-282 9-104 (202)
203 PRK12749 quinate/shikimate deh 97.0 0.0081 1.7E-07 54.1 11.0 86 172-257 112-206 (288)
204 PRK07502 cyclohexadienyl dehyd 97.0 0.0068 1.5E-07 55.3 10.6 91 185-280 7-102 (307)
205 PF11017 DUF2855: Protein of u 97.0 0.03 6.5E-07 50.5 14.0 157 183-345 135-312 (314)
206 PF01135 PCMT: Protein-L-isoas 97.0 0.0026 5.6E-08 54.4 6.9 100 177-277 66-171 (209)
207 PRK08415 enoyl-(acyl carrier p 97.0 0.017 3.6E-07 51.8 12.5 99 183-281 4-146 (274)
208 PRK07806 short chain dehydroge 97.0 0.01 2.2E-07 52.0 11.0 97 183-279 5-135 (248)
209 PRK06057 short chain dehydroge 96.9 0.0067 1.5E-07 53.6 9.8 75 183-257 6-89 (255)
210 PRK06484 short chain dehydroge 96.9 0.015 3.3E-07 57.1 13.3 76 182-257 3-89 (520)
211 COG2230 Cfa Cyclopropane fatty 96.9 0.006 1.3E-07 54.1 9.2 109 168-281 57-179 (283)
212 PRK12809 putative oxidoreducta 96.9 0.0026 5.7E-08 64.1 7.8 75 183-258 309-406 (639)
213 PRK08267 short chain dehydroge 96.9 0.016 3.4E-07 51.3 12.1 73 185-257 2-87 (260)
214 PRK12367 short chain dehydroge 96.9 0.0061 1.3E-07 53.7 9.3 74 183-257 13-89 (245)
215 PRK14192 bifunctional 5,10-met 96.9 0.0097 2.1E-07 53.3 10.5 94 165-281 140-234 (283)
216 COG2227 UbiG 2-polyprenyl-3-me 96.9 0.0088 1.9E-07 51.3 9.7 92 182-277 58-160 (243)
217 PF13241 NAD_binding_7: Putati 96.9 0.002 4.3E-08 48.5 5.3 90 183-282 6-95 (103)
218 PRK09186 flagellin modificatio 96.9 0.012 2.6E-07 51.9 11.2 74 183-256 3-92 (256)
219 PRK06200 2,3-dihydroxy-2,3-dih 96.9 0.0085 1.8E-07 53.2 10.2 75 183-257 5-90 (263)
220 PRK12828 short chain dehydroge 96.9 0.012 2.6E-07 51.1 11.0 75 183-257 6-92 (239)
221 PRK12550 shikimate 5-dehydroge 96.9 0.0072 1.6E-07 53.9 9.6 80 169-257 108-188 (272)
222 PRK12829 short chain dehydroge 96.9 0.0068 1.5E-07 53.7 9.5 77 182-258 9-97 (264)
223 PF06325 PrmA: Ribosomal prote 96.9 0.0013 2.8E-08 59.1 4.6 134 138-282 120-263 (295)
224 TIGR02992 ectoine_eutC ectoine 96.8 0.0096 2.1E-07 54.8 10.1 94 182-281 127-227 (326)
225 PRK06719 precorrin-2 dehydroge 96.8 0.0084 1.8E-07 48.8 8.6 91 183-280 12-102 (157)
226 PRK05866 short chain dehydroge 96.8 0.0067 1.4E-07 55.0 8.9 75 183-257 39-127 (293)
227 PF02353 CMAS: Mycolic acid cy 96.8 0.0063 1.4E-07 54.3 8.4 102 172-277 51-165 (273)
228 PLN00203 glutamyl-tRNA reducta 96.8 0.011 2.4E-07 57.5 10.8 97 184-281 266-372 (519)
229 PRK10258 biotin biosynthesis p 96.8 0.031 6.7E-07 49.3 12.8 154 182-342 41-203 (251)
230 PRK06500 short chain dehydroge 96.8 0.01 2.3E-07 52.0 9.8 75 183-257 5-90 (249)
231 PRK04457 spermidine synthase; 96.8 0.029 6.2E-07 49.9 12.4 95 182-277 65-176 (262)
232 PRK06196 oxidoreductase; Provi 96.8 0.01 2.2E-07 54.4 9.8 75 183-257 25-109 (315)
233 PRK07825 short chain dehydroge 96.8 0.01 2.3E-07 52.9 9.6 74 184-257 5-88 (273)
234 PRK12429 3-hydroxybutyrate deh 96.8 0.024 5.3E-07 49.9 11.9 75 183-257 3-91 (258)
235 PRK07814 short chain dehydroge 96.7 0.0099 2.1E-07 52.8 9.3 75 183-257 9-97 (263)
236 TIGR03325 BphB_TodD cis-2,3-di 96.7 0.011 2.3E-07 52.5 9.4 74 183-256 4-88 (262)
237 PRK14194 bifunctional 5,10-met 96.7 0.011 2.5E-07 53.0 9.3 96 162-280 137-233 (301)
238 PRK13942 protein-L-isoaspartat 96.7 0.015 3.3E-07 49.9 9.9 98 178-277 71-175 (212)
239 PRK08339 short chain dehydroge 96.7 0.013 2.8E-07 52.2 9.7 75 183-257 7-95 (263)
240 PF03807 F420_oxidored: NADP o 96.7 0.016 3.5E-07 42.7 8.7 86 186-277 1-93 (96)
241 PRK07340 ornithine cyclodeamin 96.7 0.015 3.3E-07 52.9 10.2 106 176-289 118-229 (304)
242 PRK07424 bifunctional sterol d 96.7 0.015 3.2E-07 55.1 10.4 75 183-257 177-255 (406)
243 PF10727 Rossmann-like: Rossma 96.7 0.0063 1.4E-07 47.5 6.6 88 183-277 9-102 (127)
244 PRK07832 short chain dehydroge 96.7 0.032 7E-07 49.8 12.3 72 186-257 2-88 (272)
245 PRK07063 short chain dehydroge 96.7 0.01 2.3E-07 52.5 9.0 75 183-257 6-96 (260)
246 PRK09072 short chain dehydroge 96.7 0.024 5.2E-07 50.2 11.3 75 183-257 4-90 (263)
247 PLN03075 nicotianamine synthas 96.7 0.01 2.2E-07 53.2 8.7 106 172-278 113-233 (296)
248 cd05311 NAD_bind_2_malic_enz N 96.7 0.021 4.5E-07 49.6 10.4 102 172-278 13-128 (226)
249 COG2226 UbiE Methylase involve 96.7 0.034 7.4E-07 48.3 11.6 102 180-282 48-160 (238)
250 PRK13394 3-hydroxybutyrate deh 96.7 0.021 4.5E-07 50.5 10.7 75 183-257 6-94 (262)
251 PRK07576 short chain dehydroge 96.7 0.0094 2E-07 53.0 8.5 74 183-256 8-95 (264)
252 PRK07062 short chain dehydroge 96.7 0.014 3E-07 51.8 9.6 75 183-257 7-97 (265)
253 PRK13944 protein-L-isoaspartat 96.6 0.015 3.3E-07 49.6 9.4 96 180-277 69-172 (205)
254 PRK14189 bifunctional 5,10-met 96.6 0.016 3.5E-07 51.6 9.7 97 162-281 136-233 (285)
255 PRK07831 short chain dehydroge 96.6 0.021 4.4E-07 50.7 10.6 76 182-257 15-107 (262)
256 PRK06180 short chain dehydroge 96.6 0.013 2.9E-07 52.5 9.3 74 184-257 4-88 (277)
257 PRK06128 oxidoreductase; Provi 96.6 0.048 1E-06 49.5 13.0 99 183-281 54-194 (300)
258 CHL00194 ycf39 Ycf39; Provisio 96.6 0.016 3.4E-07 53.1 9.8 94 186-280 2-111 (317)
259 PRK08263 short chain dehydroge 96.6 0.032 7E-07 49.8 11.6 74 184-257 3-87 (275)
260 PRK06194 hypothetical protein; 96.6 0.016 3.4E-07 52.1 9.6 75 183-257 5-93 (287)
261 PRK05867 short chain dehydroge 96.6 0.014 3E-07 51.4 9.0 75 183-257 8-96 (253)
262 PRK08217 fabG 3-ketoacyl-(acyl 96.6 0.019 4.1E-07 50.4 9.8 74 183-256 4-91 (253)
263 PRK07523 gluconate 5-dehydroge 96.6 0.015 3.3E-07 51.2 9.2 75 183-257 9-97 (255)
264 PRK05717 oxidoreductase; Valid 96.6 0.023 5E-07 50.1 10.4 75 183-257 9-94 (255)
265 PRK05876 short chain dehydroge 96.6 0.017 3.8E-07 51.7 9.6 75 183-257 5-93 (275)
266 PRK07478 short chain dehydroge 96.6 0.014 3.1E-07 51.4 8.9 75 183-257 5-93 (254)
267 PRK06949 short chain dehydroge 96.6 0.015 3.2E-07 51.3 9.1 75 183-257 8-96 (258)
268 PRK09291 short chain dehydroge 96.6 0.019 4E-07 50.7 9.7 74 184-257 2-83 (257)
269 PRK06141 ornithine cyclodeamin 96.6 0.033 7.2E-07 50.9 11.5 98 177-281 119-222 (314)
270 PRK14188 bifunctional 5,10-met 96.5 0.019 4.1E-07 51.6 9.5 96 162-281 136-233 (296)
271 PRK06101 short chain dehydroge 96.5 0.038 8.3E-07 48.3 11.5 72 185-256 2-80 (240)
272 PRK05854 short chain dehydroge 96.5 0.014 3E-07 53.4 8.9 75 183-257 13-103 (313)
273 PRK07890 short chain dehydroge 96.5 0.016 3.5E-07 51.1 9.1 75 183-257 4-92 (258)
274 PRK07574 formate dehydrogenase 96.5 0.021 4.6E-07 53.4 10.1 90 183-279 191-285 (385)
275 PRK06940 short chain dehydroge 96.5 0.034 7.5E-07 49.8 11.3 95 185-280 3-127 (275)
276 TIGR00080 pimt protein-L-isoas 96.5 0.024 5.1E-07 48.8 9.7 96 180-277 74-176 (215)
277 PRK08594 enoyl-(acyl carrier p 96.5 0.059 1.3E-06 47.7 12.5 99 183-281 6-150 (257)
278 KOG1201 Hydroxysteroid 17-beta 96.5 0.018 3.9E-07 51.1 8.8 76 182-257 36-124 (300)
279 PRK07453 protochlorophyllide o 96.5 0.014 3.1E-07 53.5 8.8 74 183-256 5-92 (322)
280 PRK07231 fabG 3-ketoacyl-(acyl 96.5 0.014 3E-07 51.2 8.4 75 183-257 4-91 (251)
281 PRK05884 short chain dehydroge 96.5 0.02 4.3E-07 49.6 9.1 71 186-256 2-78 (223)
282 PRK06505 enoyl-(acyl carrier p 96.5 0.026 5.7E-07 50.4 10.1 75 183-257 6-95 (271)
283 PRK10792 bifunctional 5,10-met 96.5 0.028 6.1E-07 50.1 10.0 95 163-280 138-233 (285)
284 PLN03139 formate dehydrogenase 96.5 0.016 3.6E-07 54.2 9.0 90 183-279 198-292 (386)
285 PRK00107 gidB 16S rRNA methylt 96.5 0.036 7.9E-07 46.5 10.3 94 181-277 43-144 (187)
286 PRK15469 ghrA bifunctional gly 96.5 0.015 3.3E-07 53.0 8.6 88 183-279 135-227 (312)
287 PLN02253 xanthoxin dehydrogena 96.5 0.023 5.1E-07 50.9 9.8 75 183-257 17-104 (280)
288 PRK09242 tropinone reductase; 96.4 0.024 5.2E-07 50.0 9.5 75 183-257 8-98 (257)
289 TIGR02356 adenyl_thiF thiazole 96.4 0.027 5.8E-07 48.0 9.3 77 183-259 20-123 (202)
290 PF02254 TrkA_N: TrkA-N domain 96.4 0.095 2.1E-06 40.0 11.7 90 187-277 1-95 (116)
291 PF03446 NAD_binding_2: NAD bi 96.4 0.027 5.8E-07 46.2 9.0 89 186-281 3-97 (163)
292 PRK08862 short chain dehydroge 96.4 0.027 5.8E-07 48.9 9.5 74 183-256 4-92 (227)
293 COG1179 Dinucleotide-utilizing 96.4 0.031 6.6E-07 48.0 9.2 99 183-281 29-156 (263)
294 PRK07024 short chain dehydroge 96.4 0.024 5.2E-07 50.1 9.3 74 184-257 2-88 (257)
295 PRK08291 ectoine utilization p 96.4 0.033 7.2E-07 51.3 10.3 94 182-281 130-230 (330)
296 COG1648 CysG Siroheme synthase 96.4 0.067 1.5E-06 45.7 11.4 118 183-304 11-130 (210)
297 PRK06841 short chain dehydroge 96.4 0.026 5.6E-07 49.7 9.4 74 183-257 14-99 (255)
298 PRK07677 short chain dehydroge 96.4 0.022 4.8E-07 50.1 8.9 74 184-257 1-88 (252)
299 PRK08589 short chain dehydroge 96.3 0.028 6E-07 50.2 9.6 74 183-257 5-92 (272)
300 PRK14191 bifunctional 5,10-met 96.3 0.042 9E-07 49.0 10.3 97 162-281 135-232 (285)
301 PRK08643 acetoin reductase; Va 96.3 0.027 5.8E-07 49.7 9.3 74 184-257 2-89 (256)
302 PLN02928 oxidoreductase family 96.3 0.022 4.8E-07 52.8 9.0 95 183-279 158-263 (347)
303 PRK06125 short chain dehydroge 96.3 0.024 5.2E-07 50.1 9.0 75 183-257 6-91 (259)
304 PRK08017 oxidoreductase; Provi 96.3 0.032 7E-07 49.1 9.8 72 185-257 3-84 (256)
305 PF02670 DXP_reductoisom: 1-de 96.3 0.1 2.2E-06 40.7 11.1 90 187-276 1-119 (129)
306 TIGR00438 rrmJ cell division p 96.3 0.042 9.1E-07 46.2 9.9 97 177-278 26-146 (188)
307 PRK07067 sorbitol dehydrogenas 96.3 0.027 5.8E-07 49.8 9.1 75 183-257 5-90 (257)
308 COG3288 PntA NAD/NADP transhyd 96.3 0.022 4.9E-07 50.4 8.2 122 181-303 161-309 (356)
309 PRK07402 precorrin-6B methylas 96.3 0.12 2.5E-06 43.8 12.7 98 180-278 37-142 (196)
310 PRK13243 glyoxylate reductase; 96.3 0.027 5.9E-07 51.9 9.3 88 183-279 149-241 (333)
311 PRK05562 precorrin-2 dehydroge 96.3 0.13 2.9E-06 44.2 12.8 116 182-302 23-141 (223)
312 PRK06138 short chain dehydroge 96.3 0.024 5.3E-07 49.7 8.7 75 183-257 4-91 (252)
313 PRK07985 oxidoreductase; Provi 96.3 0.095 2.1E-06 47.4 12.6 99 183-281 48-188 (294)
314 cd05212 NAD_bind_m-THF_DH_Cycl 96.2 0.083 1.8E-06 42.0 10.6 96 163-281 7-103 (140)
315 PRK08177 short chain dehydroge 96.2 0.026 5.7E-07 48.7 8.6 72 185-257 2-81 (225)
316 TIGR03840 TMPT_Se_Te thiopurin 96.2 0.036 7.8E-07 47.6 9.2 96 182-279 33-153 (213)
317 PRK07774 short chain dehydroge 96.2 0.029 6.3E-07 49.2 9.0 75 183-257 5-93 (250)
318 PRK05875 short chain dehydroge 96.2 0.037 7.9E-07 49.4 9.7 74 183-256 6-95 (276)
319 PRK08317 hypothetical protein; 96.2 0.041 8.9E-07 47.8 9.7 99 179-279 15-125 (241)
320 PRK06483 dihydromonapterin red 96.2 0.033 7.2E-07 48.4 9.0 74 184-257 2-84 (236)
321 PRK06172 short chain dehydroge 96.2 0.024 5.1E-07 49.9 8.1 75 183-257 6-94 (253)
322 PRK14178 bifunctional 5,10-met 96.2 0.06 1.3E-06 47.9 10.4 97 162-281 130-227 (279)
323 PRK08340 glucose-1-dehydrogena 96.2 0.037 8.1E-07 48.9 9.4 72 186-257 2-86 (259)
324 PRK14618 NAD(P)H-dependent gly 96.2 0.031 6.7E-07 51.5 9.1 88 186-278 6-104 (328)
325 PRK12747 short chain dehydroge 96.2 0.076 1.6E-06 46.7 11.3 99 183-281 3-147 (252)
326 PRK06398 aldose dehydrogenase; 96.2 0.038 8.2E-07 48.9 9.4 69 183-257 5-82 (258)
327 PRK07666 fabG 3-ketoacyl-(acyl 96.2 0.031 6.7E-07 48.7 8.7 75 183-257 6-94 (239)
328 PLN02366 spermidine synthase 96.2 0.063 1.4E-06 48.8 10.8 96 182-278 90-206 (308)
329 PRK12475 thiamine/molybdopteri 96.2 0.031 6.8E-07 51.5 9.0 77 183-259 23-128 (338)
330 PRK08655 prephenate dehydrogen 96.1 0.047 1E-06 52.4 10.4 88 186-279 2-93 (437)
331 PRK00811 spermidine synthase; 96.1 0.076 1.7E-06 47.8 11.3 94 183-277 76-190 (283)
332 PF02882 THF_DHG_CYH_C: Tetrah 96.1 0.049 1.1E-06 44.3 9.0 98 161-281 13-111 (160)
333 PRK06181 short chain dehydroge 96.1 0.033 7.2E-07 49.3 8.9 74 184-257 1-88 (263)
334 PRK06720 hypothetical protein; 96.1 0.054 1.2E-06 44.7 9.5 75 183-257 15-103 (169)
335 PRK06482 short chain dehydroge 96.1 0.055 1.2E-06 48.3 10.3 73 185-257 3-86 (276)
336 PTZ00098 phosphoethanolamine N 96.1 0.028 6.1E-07 50.0 8.2 98 180-279 49-157 (263)
337 PRK10538 malonic semialdehyde 96.1 0.045 9.8E-07 48.0 9.5 72 186-257 2-84 (248)
338 PRK06197 short chain dehydroge 96.1 0.027 5.9E-07 51.3 8.3 76 182-257 14-105 (306)
339 PRK07066 3-hydroxybutyryl-CoA 96.1 0.18 3.8E-06 46.2 13.4 89 185-277 8-117 (321)
340 PRK12746 short chain dehydroge 96.1 0.086 1.9E-06 46.3 11.3 75 183-257 5-100 (254)
341 PRK12936 3-ketoacyl-(acyl-carr 96.1 0.054 1.2E-06 47.2 10.0 75 183-257 5-90 (245)
342 PRK08213 gluconate 5-dehydroge 96.1 0.04 8.7E-07 48.7 9.2 75 183-257 11-99 (259)
343 PRK06603 enoyl-(acyl carrier p 96.1 0.051 1.1E-06 48.2 9.8 74 183-256 7-95 (260)
344 PF02558 ApbA: Ketopantoate re 96.1 0.033 7.2E-07 44.9 7.9 89 187-277 1-100 (151)
345 PRK07035 short chain dehydroge 96.1 0.038 8.2E-07 48.6 8.9 75 183-257 7-95 (252)
346 PRK12481 2-deoxy-D-gluconate 3 96.1 0.054 1.2E-06 47.7 9.9 75 183-257 7-93 (251)
347 PRK06823 ornithine cyclodeamin 96.1 0.12 2.6E-06 47.2 12.3 106 176-288 121-233 (315)
348 PRK12769 putative oxidoreducta 96.1 0.022 4.8E-07 57.6 8.2 76 182-258 325-423 (654)
349 PRK08277 D-mannonate oxidoredu 96.1 0.048 1E-06 48.8 9.6 74 183-256 9-96 (278)
350 PF01210 NAD_Gly3P_dh_N: NAD-d 96.0 0.022 4.7E-07 46.5 6.6 81 186-270 1-91 (157)
351 PRK12480 D-lactate dehydrogena 96.0 0.048 1E-06 50.2 9.6 86 183-279 145-235 (330)
352 COG1052 LdhA Lactate dehydroge 96.0 0.049 1.1E-06 49.8 9.6 89 182-279 144-237 (324)
353 PRK08085 gluconate 5-dehydroge 96.0 0.039 8.5E-07 48.6 8.8 75 183-257 8-96 (254)
354 KOG0725 Reductases with broad 96.0 0.055 1.2E-06 48.3 9.6 76 182-257 6-99 (270)
355 PRK07533 enoyl-(acyl carrier p 96.0 0.055 1.2E-06 47.9 9.6 98 183-280 9-150 (258)
356 TIGR00417 speE spermidine synt 96.0 0.1 2.2E-06 46.7 11.3 94 183-277 72-185 (270)
357 KOG1210 Predicted 3-ketosphing 96.0 0.042 9.1E-07 49.0 8.5 77 182-258 31-123 (331)
358 PRK06701 short chain dehydroge 96.0 0.13 2.8E-06 46.5 12.2 99 183-281 45-184 (290)
359 PRK14982 acyl-ACP reductase; P 96.0 0.034 7.3E-07 51.1 8.2 94 182-281 153-249 (340)
360 PRK08159 enoyl-(acyl carrier p 96.0 0.054 1.2E-06 48.4 9.6 74 183-256 9-97 (272)
361 COG2910 Putative NADH-flavin r 96.0 0.043 9.2E-07 45.1 7.8 92 186-281 2-107 (211)
362 PRK01581 speE spermidine synth 96.0 0.12 2.5E-06 47.8 11.5 94 183-278 150-268 (374)
363 PRK06079 enoyl-(acyl carrier p 96.0 0.053 1.1E-06 47.8 9.3 98 183-281 6-146 (252)
364 PRK11207 tellurite resistance 96.0 0.063 1.4E-06 45.5 9.3 93 182-277 29-133 (197)
365 PRK14176 bifunctional 5,10-met 95.9 0.073 1.6E-06 47.5 9.9 96 162-280 142-238 (287)
366 COG0569 TrkA K+ transport syst 95.9 0.061 1.3E-06 46.6 9.3 82 186-268 2-86 (225)
367 PRK12826 3-ketoacyl-(acyl-carr 95.9 0.046 1E-06 47.8 8.8 75 183-257 5-93 (251)
368 PRK08644 thiamine biosynthesis 95.9 0.049 1.1E-06 46.7 8.6 34 183-216 27-61 (212)
369 PLN02780 ketoreductase/ oxidor 95.9 0.039 8.4E-07 50.7 8.5 44 183-226 52-96 (320)
370 PRK06463 fabG 3-ketoacyl-(acyl 95.9 0.075 1.6E-06 46.8 10.1 74 183-257 6-89 (255)
371 PRK13403 ketol-acid reductoiso 95.9 0.092 2E-06 47.6 10.5 89 182-278 14-106 (335)
372 PRK07454 short chain dehydroge 95.9 0.046 9.9E-07 47.7 8.6 76 182-257 4-93 (241)
373 PRK07074 short chain dehydroge 95.9 0.053 1.1E-06 47.8 9.1 74 184-257 2-87 (257)
374 TIGR03589 PseB UDP-N-acetylglu 95.9 0.062 1.3E-06 49.4 9.8 75 183-257 3-84 (324)
375 PRK05447 1-deoxy-D-xylulose 5- 95.9 0.11 2.4E-06 48.3 11.2 93 185-277 2-121 (385)
376 PRK06124 gluconate 5-dehydroge 95.9 0.055 1.2E-06 47.7 9.1 75 183-257 10-98 (256)
377 TIGR02622 CDP_4_6_dhtase CDP-g 95.9 0.046 1E-06 50.8 9.0 75 183-257 3-85 (349)
378 PRK04148 hypothetical protein; 95.9 0.051 1.1E-06 42.6 7.7 84 182-268 15-98 (134)
379 PRK08703 short chain dehydroge 95.9 0.063 1.4E-06 46.7 9.4 43 183-225 5-48 (239)
380 PRK15181 Vi polysaccharide bio 95.9 0.058 1.3E-06 50.1 9.6 86 170-256 2-99 (348)
381 PRK07904 short chain dehydroge 95.9 0.048 1E-06 48.1 8.6 76 182-257 6-97 (253)
382 PRK14967 putative methyltransf 95.9 0.08 1.7E-06 45.8 9.8 92 181-277 34-158 (223)
383 TIGR02354 thiF_fam2 thiamine b 95.9 0.06 1.3E-06 45.7 8.7 34 183-216 20-54 (200)
384 PRK08251 short chain dehydroge 95.8 0.056 1.2E-06 47.3 8.9 73 184-256 2-90 (248)
385 PRK08690 enoyl-(acyl carrier p 95.8 0.063 1.4E-06 47.6 9.3 75 183-257 5-94 (261)
386 PRK07417 arogenate dehydrogena 95.8 0.087 1.9E-06 47.3 10.2 88 186-279 2-92 (279)
387 PRK06179 short chain dehydroge 95.8 0.046 1E-06 48.6 8.4 71 184-257 4-83 (270)
388 PRK12937 short chain dehydroge 95.8 0.2 4.4E-06 43.6 12.4 98 183-280 4-141 (245)
389 COG0421 SpeE Spermidine syntha 95.8 0.12 2.6E-06 46.3 10.8 92 185-277 78-189 (282)
390 PRK07097 gluconate 5-dehydroge 95.8 0.076 1.7E-06 47.1 9.7 75 183-257 9-97 (265)
391 PRK08300 acetaldehyde dehydrog 95.8 0.69 1.5E-05 41.8 15.6 169 185-356 5-198 (302)
392 PF00106 adh_short: short chai 95.8 0.038 8.3E-07 45.1 7.2 73 185-257 1-90 (167)
393 PRK06198 short chain dehydroge 95.8 0.076 1.6E-06 46.8 9.7 75 183-257 5-94 (260)
394 PRK14172 bifunctional 5,10-met 95.8 0.1 2.2E-06 46.5 10.1 96 163-281 137-233 (278)
395 PRK01438 murD UDP-N-acetylmura 95.8 0.079 1.7E-06 51.6 10.5 71 182-258 14-89 (480)
396 PF05368 NmrA: NmrA-like famil 95.8 0.07 1.5E-06 46.4 9.2 70 187-257 1-74 (233)
397 TIGR01963 PHB_DH 3-hydroxybuty 95.8 0.068 1.5E-06 46.9 9.3 74 184-257 1-88 (255)
398 PRK08762 molybdopterin biosynt 95.8 0.074 1.6E-06 50.0 9.9 77 183-259 134-237 (376)
399 PRK06935 2-deoxy-D-gluconate 3 95.8 0.087 1.9E-06 46.5 9.9 74 183-257 14-101 (258)
400 TIGR01832 kduD 2-deoxy-D-gluco 95.8 0.064 1.4E-06 46.9 9.0 75 183-257 4-90 (248)
401 PRK07791 short chain dehydroge 95.8 0.088 1.9E-06 47.4 10.1 75 183-257 5-102 (286)
402 PRK00141 murD UDP-N-acetylmura 95.8 0.069 1.5E-06 51.9 9.9 72 182-257 13-84 (473)
403 PRK08261 fabG 3-ketoacyl-(acyl 95.8 0.013 2.8E-07 56.6 4.9 92 179-281 29-126 (450)
404 PRK07984 enoyl-(acyl carrier p 95.8 0.072 1.6E-06 47.4 9.3 74 183-256 5-93 (262)
405 PRK06522 2-dehydropantoate 2-r 95.8 0.056 1.2E-06 49.1 8.8 89 186-277 2-99 (304)
406 PLN02989 cinnamyl-alcohol dehy 95.8 0.05 1.1E-06 49.9 8.5 76 182-257 3-87 (325)
407 PRK11036 putative S-adenosyl-L 95.7 0.1 2.3E-06 46.1 10.2 93 182-277 43-148 (255)
408 PRK08328 hypothetical protein; 95.7 0.088 1.9E-06 45.8 9.5 93 183-276 26-148 (231)
409 PRK04266 fibrillarin; Provisio 95.7 0.16 3.5E-06 44.0 11.1 97 180-277 69-175 (226)
410 TIGR02371 ala_DH_arch alanine 95.7 0.075 1.6E-06 48.9 9.5 99 176-281 121-225 (325)
411 TIGR02355 moeB molybdopterin s 95.7 0.12 2.6E-06 45.2 10.3 76 184-259 24-126 (240)
412 PRK07889 enoyl-(acyl carrier p 95.7 0.087 1.9E-06 46.6 9.7 75 183-257 6-95 (256)
413 PRK05565 fabG 3-ketoacyl-(acyl 95.7 0.062 1.3E-06 46.9 8.7 74 184-257 5-93 (247)
414 PRK05653 fabG 3-ketoacyl-(acyl 95.7 0.07 1.5E-06 46.4 9.0 75 183-257 4-92 (246)
415 PLN02819 lysine-ketoglutarate 95.7 0.11 2.5E-06 54.5 11.6 96 183-278 568-679 (1042)
416 PRK11559 garR tartronate semia 95.7 0.11 2.4E-06 47.0 10.5 87 186-279 4-97 (296)
417 PRK08264 short chain dehydroge 95.7 0.048 1E-06 47.4 7.8 71 183-257 5-83 (238)
418 PRK13255 thiopurine S-methyltr 95.7 0.08 1.7E-06 45.6 9.0 94 182-277 36-154 (218)
419 TIGR01289 LPOR light-dependent 95.7 0.083 1.8E-06 48.3 9.6 74 184-257 3-91 (314)
420 PRK10669 putative cation:proto 95.7 0.12 2.6E-06 51.4 11.4 92 185-277 418-514 (558)
421 PRK06997 enoyl-(acyl carrier p 95.7 0.073 1.6E-06 47.2 9.0 75 183-257 5-94 (260)
422 PRK12384 sorbitol-6-phosphate 95.7 0.072 1.6E-06 47.0 8.9 74 184-257 2-91 (259)
423 PRK14179 bifunctional 5,10-met 95.7 0.096 2.1E-06 46.7 9.5 96 163-281 137-233 (284)
424 PRK07688 thiamine/molybdopteri 95.6 0.066 1.4E-06 49.5 8.8 77 183-259 23-128 (339)
425 PLN02520 bifunctional 3-dehydr 95.6 0.066 1.4E-06 52.6 9.3 95 183-280 378-477 (529)
426 TIGR01505 tartro_sem_red 2-hyd 95.6 0.09 1.9E-06 47.5 9.6 85 187-278 2-93 (291)
427 COG2423 Predicted ornithine cy 95.6 0.12 2.6E-06 47.2 10.3 105 175-281 122-228 (330)
428 PLN02896 cinnamyl-alcohol dehy 95.6 0.094 2E-06 48.8 10.0 76 182-257 8-89 (353)
429 PRK06914 short chain dehydroge 95.6 0.076 1.6E-06 47.5 9.1 74 184-257 3-91 (280)
430 PRK05557 fabG 3-ketoacyl-(acyl 95.6 0.23 5E-06 43.1 12.0 75 183-257 4-93 (248)
431 PRK07069 short chain dehydroge 95.6 0.14 2.9E-06 44.9 10.6 71 187-257 2-89 (251)
432 cd01487 E1_ThiF_like E1_ThiF_l 95.6 0.096 2.1E-06 43.4 8.9 83 186-268 1-109 (174)
433 PRK06113 7-alpha-hydroxysteroi 95.6 0.085 1.9E-06 46.5 9.2 75 183-257 10-98 (255)
434 PRK09310 aroDE bifunctional 3- 95.6 0.1 2.3E-06 50.6 10.4 83 172-259 320-402 (477)
435 PRK05479 ketol-acid reductoiso 95.6 0.14 2.9E-06 46.9 10.5 88 183-277 16-107 (330)
436 TIGR00872 gnd_rel 6-phosphoglu 95.6 0.2 4.3E-06 45.5 11.7 90 186-279 2-94 (298)
437 COG0027 PurT Formate-dependent 95.6 0.15 3.2E-06 45.5 10.2 167 182-352 10-195 (394)
438 PRK08287 cobalt-precorrin-6Y C 95.6 0.15 3.3E-06 42.7 10.3 93 181-277 29-130 (187)
439 PRK03659 glutathione-regulated 95.6 0.13 2.7E-06 51.6 11.2 92 185-277 401-497 (601)
440 PRK14190 bifunctional 5,10-met 95.6 0.13 2.8E-06 45.9 10.1 97 162-281 136-233 (284)
441 PF00899 ThiF: ThiF family; I 95.6 0.12 2.5E-06 40.9 9.0 95 184-278 2-124 (135)
442 PRK07775 short chain dehydroge 95.6 0.11 2.4E-06 46.4 9.9 75 183-257 9-97 (274)
443 COG0287 TyrA Prephenate dehydr 95.6 0.098 2.1E-06 46.8 9.4 93 185-281 4-101 (279)
444 KOG1270 Methyltransferases [Co 95.6 0.04 8.7E-07 47.9 6.5 94 184-279 90-196 (282)
445 PRK12823 benD 1,6-dihydroxycyc 95.6 0.099 2.1E-06 46.1 9.5 74 183-257 7-94 (260)
446 PLN02823 spermine synthase 95.6 0.17 3.7E-06 46.6 11.1 93 184-277 104-219 (336)
447 PRK05650 short chain dehydroge 95.5 0.079 1.7E-06 47.1 8.8 72 186-257 2-87 (270)
448 PRK14177 bifunctional 5,10-met 95.5 0.13 2.8E-06 45.9 9.8 97 162-281 137-234 (284)
449 PRK13302 putative L-aspartate 95.5 0.12 2.7E-06 46.1 9.8 88 185-277 7-97 (271)
450 PLN00141 Tic62-NAD(P)-related 95.5 0.1 2.2E-06 45.9 9.3 98 183-280 16-133 (251)
451 TIGR01532 E4PD_g-proteo D-eryt 95.5 0.12 2.6E-06 47.4 9.7 94 186-280 1-122 (325)
452 PRK08410 2-hydroxyacid dehydro 95.5 0.08 1.7E-06 48.3 8.7 85 183-279 144-233 (311)
453 KOG1014 17 beta-hydroxysteroid 95.5 0.22 4.7E-06 44.6 11.0 109 182-291 47-199 (312)
454 PRK14103 trans-aconitate 2-met 95.5 0.2 4.4E-06 44.2 11.1 91 182-277 28-125 (255)
455 PRK13656 trans-2-enoyl-CoA red 95.5 0.38 8.3E-06 44.9 13.0 76 182-258 39-142 (398)
456 PRK08416 7-alpha-hydroxysteroi 95.5 0.1 2.2E-06 46.2 9.2 74 183-256 7-96 (260)
457 PRK14106 murD UDP-N-acetylmura 95.5 0.081 1.8E-06 51.0 9.2 71 183-258 4-79 (450)
458 PRK12921 2-dehydropantoate 2-r 95.5 0.12 2.6E-06 46.9 9.9 89 186-277 2-101 (305)
459 PRK06114 short chain dehydroge 95.5 0.12 2.6E-06 45.5 9.6 75 183-257 7-96 (254)
460 PRK08628 short chain dehydroge 95.5 0.087 1.9E-06 46.5 8.7 75 183-257 6-93 (258)
461 PLN02490 MPBQ/MSBQ methyltrans 95.5 0.13 2.9E-06 47.3 10.0 96 182-279 112-216 (340)
462 PRK00094 gpsA NAD(P)H-dependen 95.5 0.11 2.4E-06 47.7 9.6 87 186-277 3-104 (325)
463 COG0111 SerA Phosphoglycerate 95.5 0.065 1.4E-06 49.1 7.9 33 183-215 141-173 (324)
464 PLN02986 cinnamyl-alcohol dehy 95.5 0.082 1.8E-06 48.4 8.8 74 183-256 4-86 (322)
465 PLN02256 arogenate dehydrogena 95.4 0.15 3.4E-06 46.3 10.3 89 182-279 34-128 (304)
466 PF07991 IlvN: Acetohydroxy ac 95.4 0.15 3.3E-06 41.2 9.0 87 183-277 3-94 (165)
467 PRK05708 2-dehydropantoate 2-r 95.4 0.084 1.8E-06 48.1 8.7 91 186-277 4-103 (305)
468 PRK03562 glutathione-regulated 95.4 0.099 2.1E-06 52.5 9.8 92 184-276 400-496 (621)
469 PLN02686 cinnamoyl-CoA reducta 95.4 0.093 2E-06 49.2 9.1 73 182-255 51-136 (367)
470 PRK06046 alanine dehydrogenase 95.4 0.1 2.3E-06 47.9 9.2 105 176-288 122-234 (326)
471 TIGR03206 benzo_BadH 2-hydroxy 95.4 0.1 2.2E-06 45.7 8.9 74 183-256 2-89 (250)
472 PRK06953 short chain dehydroge 95.4 0.099 2.1E-06 45.0 8.6 72 185-257 2-80 (222)
473 PRK08303 short chain dehydroge 95.4 0.11 2.4E-06 47.3 9.3 74 183-256 7-105 (305)
474 TIGR02632 RhaD_aldol-ADH rhamn 95.4 0.071 1.5E-06 54.2 8.7 75 183-257 413-503 (676)
475 PRK07370 enoyl-(acyl carrier p 95.4 0.097 2.1E-06 46.3 8.7 99 183-281 5-150 (258)
476 PRK15409 bifunctional glyoxyla 95.3 0.099 2.2E-06 48.0 8.8 88 183-279 144-237 (323)
477 PRK13581 D-3-phosphoglycerate 95.3 0.14 3E-06 50.4 10.4 88 183-279 139-231 (526)
478 PLN02657 3,8-divinyl protochlo 95.3 0.12 2.6E-06 48.8 9.7 76 182-257 58-146 (390)
479 PRK01683 trans-aconitate 2-met 95.3 0.23 5E-06 43.9 11.0 93 182-277 30-129 (258)
480 PRK14180 bifunctional 5,10-met 95.3 0.16 3.4E-06 45.3 9.7 97 162-281 136-233 (282)
481 PRK15116 sulfur acceptor prote 95.3 0.17 3.6E-06 45.0 9.8 99 183-281 29-156 (268)
482 PRK08063 enoyl-(acyl carrier p 95.3 0.096 2.1E-06 45.9 8.5 75 183-257 3-92 (250)
483 PRK08226 short chain dehydroge 95.3 0.13 2.8E-06 45.4 9.4 75 183-257 5-92 (263)
484 PRK07856 short chain dehydroge 95.3 0.052 1.1E-06 47.8 6.7 72 183-257 5-85 (252)
485 PLN02244 tocopherol O-methyltr 95.3 0.12 2.6E-06 47.9 9.3 95 182-278 117-223 (340)
486 PRK11880 pyrroline-5-carboxyla 95.3 0.13 2.8E-06 45.8 9.3 85 186-277 4-93 (267)
487 PF01408 GFO_IDH_MocA: Oxidore 95.3 0.36 7.8E-06 37.0 10.7 85 186-277 2-91 (120)
488 PRK06077 fabG 3-ketoacyl-(acyl 95.3 0.31 6.7E-06 42.6 11.7 98 184-281 6-143 (252)
489 PRK14166 bifunctional 5,10-met 95.3 0.18 3.8E-06 45.0 9.8 97 162-281 135-232 (282)
490 cd01079 NAD_bind_m-THF_DH NAD 95.3 0.13 2.8E-06 43.0 8.4 116 162-281 31-159 (197)
491 PRK07102 short chain dehydroge 95.3 0.1 2.2E-06 45.6 8.4 73 185-257 2-86 (243)
492 PRK08945 putative oxoacyl-(acy 95.3 0.12 2.6E-06 45.3 8.8 76 182-257 10-102 (247)
493 PRK08278 short chain dehydroge 95.2 0.17 3.7E-06 45.2 9.9 75 183-257 5-100 (273)
494 PLN02695 GDP-D-mannose-3',5'-e 95.2 0.082 1.8E-06 49.6 8.2 74 182-256 19-94 (370)
495 COG0334 GdhA Glutamate dehydro 95.2 0.26 5.6E-06 46.0 10.9 62 156-218 180-241 (411)
496 PRK13304 L-aspartate dehydroge 95.2 0.19 4E-06 44.8 9.9 86 186-277 3-91 (265)
497 TIGR02415 23BDH acetoin reduct 95.2 0.14 3E-06 45.0 9.1 73 185-257 1-87 (254)
498 TIGR00138 gidB 16S rRNA methyl 95.2 0.15 3.3E-06 42.5 8.8 92 183-277 42-141 (181)
499 PRK09135 pteridine reductase; 95.2 0.14 2.9E-06 44.7 9.0 75 183-257 5-95 (249)
500 PRK08220 2,3-dihydroxybenzoate 95.2 0.15 3.3E-06 44.6 9.3 69 183-257 7-86 (252)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=7.2e-68 Score=470.78 Aligned_cols=334 Identities=44% Similarity=0.713 Sum_probs=310.0
Q ss_pred cccceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 018246 9 HPQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKF 88 (359)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 88 (359)
.+||+.++..++++ +++.+++.|+|+++||+|+|+++|+|++|+|..+|.++...+|.+||||.+|+|+++|++|++|
T Consensus 2 ~~mkA~~~~~~~~p--l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~ 79 (339)
T COG1064 2 MTMKAAVLKKFGQP--LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGL 79 (339)
T ss_pred cceEEEEEccCCCC--ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccC
Confidence 47888888866555 8999999999999999999999999999999999999988899999999999999999999999
Q ss_pred CCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchh
Q 018246 89 KEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAG 168 (359)
Q Consensus 89 ~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~ 168 (359)
++||||.+.+...+|++|++|+.|..+.|++..+. |.+.+|+|+||+++|+++++++|+++++++||++.|++
T Consensus 80 k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~-------gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaG 152 (339)
T COG1064 80 KVGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT-------GYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAG 152 (339)
T ss_pred CCCCEEEecCccCCCCCCccccCcccccCCCcccc-------ceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCe
Confidence 99999998566679999999999999999986544 55688999999999999999999999999999999999
Q ss_pred hhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCc
Q 018246 169 ITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTM 248 (359)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~ 248 (359)
.|.|++|+.... +||++|+|.|.|++|.+++|+|+++|++|+++++++++++.+ +++|++++++.++++..+.+.+.+
T Consensus 153 iT~y~alk~~~~-~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a-~~lGAd~~i~~~~~~~~~~~~~~~ 230 (339)
T COG1064 153 ITTYRALKKANV-KPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLELA-KKLGADHVINSSDSDALEAVKEIA 230 (339)
T ss_pred eeEeeehhhcCC-CCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHHHH-HHhCCcEEEEcCCchhhHHhHhhC
Confidence 999999998655 999999999999999999999999999999999999999999 999999999987666666665569
Q ss_pred cEEEECCCChhhHHHHHhccccCCEEEEecCCC-C-CeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcccE-
Q 018246 249 DYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE-K-PLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADI- 325 (359)
Q Consensus 249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~-~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~~- 325 (359)
|+++++++ ..+++.+++.|+++|+++.+|... . ...++.+.++.+++++.|+..+++.++++++++..+++++|.+
T Consensus 231 d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~i~ 309 (339)
T COG1064 231 DAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPEIL 309 (339)
T ss_pred cEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceeeEE
Confidence 99999999 778999999999999999999984 4 3568899999999999999999999999999999999999999
Q ss_pred EEEccccHHHHHHHHHcCCccEEEEEEcC
Q 018246 326 ELVRMDQINTAMERLAKSDVKYRFVIDVG 354 (359)
Q Consensus 326 ~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 354 (359)
+.++++++++||+.|.+++..||+||.+.
T Consensus 310 e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 310 ETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred eeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 69999999999999999999999999865
No 2
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.2e-63 Score=427.27 Aligned_cols=348 Identities=57% Similarity=0.989 Sum_probs=322.6
Q ss_pred ccceeeeeecCCCC--CccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCC
Q 018246 10 PQKAIGWAARDNTG--TFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSK 87 (359)
Q Consensus 10 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 87 (359)
+.++..|..+...+ +++..++++|+++++||+|+++++|||++|++...|.++...+|.++|||.+|+|+++|++|++
T Consensus 7 p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~V~~ 86 (360)
T KOG0023|consen 7 PEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSNVTG 86 (360)
T ss_pred chhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCCccc
Confidence 44444555545555 6666999999999999999999999999999999999998899999999999999999999999
Q ss_pred CCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccch
Q 018246 88 FKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCA 167 (359)
Q Consensus 88 ~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~ 167 (359)
|++||||-|-....+|..|++|+.+..++|++....+.+...+|..++|+|++|+++++..+++||++++.+.||++.|+
T Consensus 87 ~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCa 166 (360)
T KOG0023|consen 87 FKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCA 166 (360)
T ss_pred ccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhc
Confidence 99999999988888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCC-CHHHHHHhcC
Q 018246 168 GITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSS-DPAKVKAAMG 246 (359)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~-~~~~~~~~~~ 246 (359)
+.|+|..|...+. .||++|-|.|+|++|.+++|+|+++|.+|++++++..+.+++.+.+|++..++.. +++.++.+.+
T Consensus 167 GITvYspLk~~g~-~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~ 245 (360)
T KOG0023|consen 167 GITVYSPLKRSGL-GPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMK 245 (360)
T ss_pred ceEEeehhHHcCC-CCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHH
Confidence 9999999988888 7999999999988999999999999999999999997888888999999888877 7788888877
Q ss_pred CccEEEECCC--ChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCccc
Q 018246 247 TMDYIIDTVS--AVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAAD 324 (359)
Q Consensus 247 ~~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~ 324 (359)
-.|..++++. ....++.++..|+++|++|++|.+.....++.++++.+.+.|.|+..+++.+.++++++..++.+++.
T Consensus 246 ~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~a~~~ik~~ 325 (360)
T KOG0023|consen 246 TTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFVARGLIKSP 325 (360)
T ss_pred hhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHHHcCCCcCc
Confidence 6777777766 66679999999999999999999998999999999999999999999999999999999999999999
Q ss_pred EEEEccccHHHHHHHHHcCCccEEEEEEcCCCcC
Q 018246 325 IELVRMDQINTAMERLAKSDVKYRFVIDVGNSKL 358 (359)
Q Consensus 325 ~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~~~~ 358 (359)
++..+++++++||++|.+++.++|.||++..+..
T Consensus 326 IE~v~~~~v~~a~erm~kgdV~yRfVvD~s~~~~ 359 (360)
T KOG0023|consen 326 IELVKLSEVNEAYERMEKGDVRYRFVVDVSKSLL 359 (360)
T ss_pred eEEEehhHHHHHHHHHHhcCeeEEEEEEcccccC
Confidence 9999999999999999999999999999988754
No 3
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=8.1e-59 Score=432.34 Aligned_cols=356 Identities=82% Similarity=1.362 Sum_probs=313.3
Q ss_pred CCCCCCCCcccceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEE
Q 018246 1 MAKSPETEHPQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTK 80 (359)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~ 80 (359)
||+||+..++||++++...+.++.++..+++.|.++++||+|||.++|||++|++.+.|.++...+|.++|||++|+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~ 80 (360)
T PLN02586 1 MAKSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTK 80 (360)
T ss_pred CCCChhhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEE
Confidence 99999999999999999988788899999999999999999999999999999999988665446688999999999999
Q ss_pred eCCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccc
Q 018246 81 VGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDA 160 (359)
Q Consensus 81 vG~~v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~ 160 (359)
+|++|++|++||||++.+....|+.|.+|+.|.++.|.++.+.+.....+|...+|+|+||+++|++.++++|+++++++
T Consensus 81 vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~ 160 (360)
T PLN02586 81 LGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDA 160 (360)
T ss_pred ECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHH
Confidence 99999999999999766666689999999999999999865432211112334579999999999999999999999999
Q ss_pred cccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 018246 161 GAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK 240 (359)
Q Consensus 161 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (359)
++++++.+.|+|+++.....+++|++|||.|+|++|++++|+|+.+|++|++++.++++...+.+++|+++++++++.+.
T Consensus 161 aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~ 240 (360)
T PLN02586 161 GAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEK 240 (360)
T ss_pred hhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHH
Confidence 99999999999999987776689999999999999999999999999999998888777666658899999998776555
Q ss_pred HHHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCC
Q 018246 241 VKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHN 320 (359)
Q Consensus 241 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~ 320 (359)
+.+..+++|+|||++|...++..++++++++|+++.+|.......+++..++.++..+.|+..++..+++++++++++|+
T Consensus 241 ~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~ 320 (360)
T PLN02586 241 MKAAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHN 320 (360)
T ss_pred HHhhcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCC
Confidence 56666689999999998766899999999999999999765566778888888899998988888889999999999999
Q ss_pred CcccEEEEccccHHHHHHHHHcCCccEEEEEEcCCC
Q 018246 321 IAADIELVRMDQINTAMERLAKSDVKYRFVIDVGNS 356 (359)
Q Consensus 321 i~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~~ 356 (359)
+++.+++|+|+++++||+.+.+++..||+|+.+..+
T Consensus 321 i~~~~~~~~l~~~~~A~~~~~~~~~~gkvvi~~~~~ 356 (360)
T PLN02586 321 ITADIELIRMDEINTAMERLAKSDVRYRFVIDVANS 356 (360)
T ss_pred CCCcEEEEeHHHHHHHHHHHHcCCCcEEEEEEcccc
Confidence 998778999999999999999998889999998554
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.6e-59 Score=399.75 Aligned_cols=334 Identities=22% Similarity=0.349 Sum_probs=295.2
Q ss_pred cccceeeeeecCCCCCccceeeecCCC-CCCeEEEEEeeeecchhhhhhhccCCCC---CCCCCcccccccEEEEEeCCC
Q 018246 9 HPQKAIGWAARDNTGTFSPFHFSRRET-GADDVTIKILFCGICHSDLHCARNEWGV---TNYPIVPGHEIVGTVTKVGNN 84 (359)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~ 84 (359)
.+|++++|. .++++++.+.+.|++ .|+||+|++.++|||+||+|.+...... .+.|+++|||.+|+|+++|++
T Consensus 3 ~~~~A~vl~---g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~ 79 (354)
T KOG0024|consen 3 ADNLALVLR---GKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDE 79 (354)
T ss_pred cccceeEEE---ccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccc
Confidence 357787766 445588889999987 9999999999999999999999776542 346999999999999999999
Q ss_pred CCCCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccc
Q 018246 85 VSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPL 164 (359)
Q Consensus 85 v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l 164 (359)
|+++++||||++.|.. +|..|++|++|.||.|+.+.+...+ ..+|++++|++.+++.|++|||+++++++|.+
T Consensus 80 Vk~LkVGDrVaiEpg~-~c~~cd~CK~GrYNlCp~m~f~atp------p~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ 152 (354)
T KOG0024|consen 80 VKHLKVGDRVAIEPGL-PCRDCDFCKEGRYNLCPHMVFCATP------PVDGTLAEYYVHPADFCYKLPDNVSFEEGALI 152 (354)
T ss_pred ccccccCCeEEecCCC-ccccchhhhCcccccCCccccccCC------CcCCceEEEEEechHheeeCCCCCchhhcccc
Confidence 9999999999999887 9999999999999999999877554 34699999999999999999999999998755
Q ss_pred cchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCH---HH
Q 018246 165 LCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDP---AK 240 (359)
Q Consensus 165 ~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~---~~ 240 (359)
. ++..+|+|.+.... ++|++|||+|+|++|+.+...||++|| +|++++-.++|++.+ ++||++.+.+.... +.
T Consensus 153 e-PLsV~~HAcr~~~v-k~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~A-k~~Ga~~~~~~~~~~~~~~ 229 (354)
T KOG0024|consen 153 E-PLSVGVHACRRAGV-KKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELA-KKFGATVTDPSSHKSSPQE 229 (354)
T ss_pred c-chhhhhhhhhhcCc-ccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHH-HHhCCeEEeeccccccHHH
Confidence 5 47888999987776 999999999999999999999999999 999999999999999 78999998876653 23
Q ss_pred HHHhc----C--CccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHH
Q 018246 241 VKAAM----G--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLD 314 (359)
Q Consensus 241 ~~~~~----~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~ 314 (359)
+.+.. + .+|++|||+|...+++.++..++.+|.++++|......+|+..+...|++.+.|+..+...+|..+++
T Consensus 230 ~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~ 309 (354)
T KOG0024|consen 230 LAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIE 309 (354)
T ss_pred HHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHH
Confidence 33322 1 49999999999999999999999999999999988899999999999999999999999889999999
Q ss_pred HHHhCCCc--ccE-EEEccccHHHHHHHHHcCCc-cEEEEEEcCC
Q 018246 315 FCAKHNIA--ADI-ELVRMDQINTAMERLAKSDV-KYRFVIDVGN 355 (359)
Q Consensus 315 ~l~~g~i~--~~~-~~~~l~~~~~a~~~~~~~~~-~gkvvv~~~~ 355 (359)
++++|++. +.+ +.|+++++++||+.+.+++. .-|+++..++
T Consensus 310 li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 310 LVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred HHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 99999994 555 89999999999999998775 4688887653
No 5
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=7.4e-55 Score=406.97 Aligned_cols=345 Identities=71% Similarity=1.241 Sum_probs=298.2
Q ss_pred ceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCCC
Q 018246 12 KAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEG 91 (359)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG 91 (359)
+++++...+.++.++..+++.|.|+++||+|||.++|+|++|++.+.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus 6 ~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vG 85 (375)
T PLN02178 6 KAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEG 85 (375)
T ss_pred eeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCC
Confidence 56677776777888888999999999999999999999999999998876444568899999999999999999999999
Q ss_pred CEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhh
Q 018246 92 DKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITV 171 (359)
Q Consensus 92 drV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta 171 (359)
|||++.+....|+.|.+|++|.++.|.++.+.+......|...+|+|+||+++|++.++++|+++++++++++.+...|+
T Consensus 86 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta 165 (375)
T PLN02178 86 DRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITV 165 (375)
T ss_pred CEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHH
Confidence 99976666557999999999999999987543222222233346999999999999999999999999999999999999
Q ss_pred hhHhHhcCC-CCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccE
Q 018246 172 YSPMKYYGM-TEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDY 250 (359)
Q Consensus 172 ~~~l~~~~~-~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~ 250 (359)
|+++..... .++|++|+|.|+|++|++++|+|+.+|++|+++++++++...+.+++|+++++++.+.+.+.+..+++|+
T Consensus 166 ~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~~~~~D~ 245 (375)
T PLN02178 166 YSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDF 245 (375)
T ss_pred HHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHhhCCCcE
Confidence 999877654 3689999999999999999999999999999998876664444489999999987665555555568999
Q ss_pred EEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcccEEEEcc
Q 018246 251 IIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADIELVRM 330 (359)
Q Consensus 251 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~~~~~~l 330 (359)
+||++|...++..++++++++|+++.+|......+++...++.+++++.|+..++..++.++++++++|++++.++.|||
T Consensus 246 vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i~~~~l 325 (375)
T PLN02178 246 IIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKM 325 (375)
T ss_pred EEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCcccEEEEeH
Confidence 99999988668999999999999999998665667788888899999999998888899999999999999988888999
Q ss_pred ccHHHHHHHHHcCCccEEEEEEcCCC
Q 018246 331 DQINTAMERLAKSDVKYRFVIDVGNS 356 (359)
Q Consensus 331 ~~~~~a~~~~~~~~~~gkvvv~~~~~ 356 (359)
+++++||+.+.+++..||+|+.+.++
T Consensus 326 ~~~~~A~~~~~~~~~~gkvvi~~~~~ 351 (375)
T PLN02178 326 SDINSAMDRLAKSDVRYRFVIDVANS 351 (375)
T ss_pred HHHHHHHHHHHcCCCceEEEEEeccc
Confidence 99999999999998889999998544
No 6
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=3.8e-55 Score=380.84 Aligned_cols=328 Identities=25% Similarity=0.426 Sum_probs=288.5
Q ss_pred CCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEecc
Q 018246 20 DNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVL 99 (359)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~ 99 (359)
...++|+++++++++|++|||+||+.++|+||+|.+.+.|..+.. +|.++|||++|+|++||++|+++++||+| +..+
T Consensus 10 ~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkpGDhV-I~~f 87 (366)
T COG1062 10 EAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKPGDHV-ILLF 87 (366)
T ss_pred cCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCCCCEE-EEcc
Confidence 456669999999999999999999999999999999999998866 99999999999999999999999999999 6778
Q ss_pred ccCCCCCccccCCCCCCCcccccc-cccccCCCCCC-------------CCccceEEEeeCCceEECCCCCCcccccccc
Q 018246 100 VASCQKCESCQQGLENYCPNMILT-YNSIDRDGTKT-------------YGGYSDLIVVDQHYVLRFPDNMPLDAGAPLL 165 (359)
Q Consensus 100 ~~~~~~c~~~~~~~~~~~~~~~~~-~~~~~~~g~~~-------------~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~ 165 (359)
.+.|++|.+|+.|.+|+|....-. ..+...+|.++ -++|++|.++++.+++++++..+++.++.+.
T Consensus 88 ~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llG 167 (366)
T COG1062 88 TPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLG 167 (366)
T ss_pred cCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCCccceEEEe
Confidence 889999999999999999866222 22333333211 1599999999999999999999999999999
Q ss_pred chhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCH----HH
Q 018246 166 CAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDP----AK 240 (359)
Q Consensus 166 ~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~----~~ 240 (359)
|...|.+.++.+.+.+++|++|.|.|.|++|++++|-|+..|+ ++++++.++++++.+ ++||+++++|.++. +.
T Consensus 168 CgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A-~~fGAT~~vn~~~~~~vv~~ 246 (366)
T COG1062 168 CGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELA-KKFGATHFVNPKEVDDVVEA 246 (366)
T ss_pred eeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHH-HhcCCceeecchhhhhHHHH
Confidence 9999999999999999999999999999999999999999999 999999999999999 99999999999765 34
Q ss_pred HHHhcC-CccEEEECCCChhhHHHHHhccccCCEEEEecCCCC--CeeeCHHHHHhcCcEEEEeecCC---HHHHHHHHH
Q 018246 241 VKAAMG-TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK--PLEVPIFALVGARRLVGGSNVGG---MKETQEMLD 314 (359)
Q Consensus 241 ~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~~~---~~~~~~~~~ 314 (359)
+.++++ ++|++|||+|+..+++.++.+..++|+.+.+|.... ..+.+.+++... .++.|+.++. +.++.++++
T Consensus 247 i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~~~p~~diP~lv~ 325 (366)
T COG1062 247 IVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGGARPRSDIPRLVD 325 (366)
T ss_pred HHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEEeecCCccccchhHHHH
Confidence 556666 999999999999999999999999999999998664 455666776655 8899988864 477999999
Q ss_pred HHHhCCCcc--cE-EEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 315 FCAKHNIAA--DI-ELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 315 ~l~~g~i~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
++.+|++.. .+ +.++|+|++|||+.|.+++.. |-||.
T Consensus 326 ~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 326 LYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred HHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence 999999953 33 899999999999999999875 55543
No 7
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.1e-52 Score=391.00 Aligned_cols=345 Identities=50% Similarity=0.936 Sum_probs=299.7
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
+++++ ...+.+.+++++++.|+++++||+|||.++++|++|++.+.|.++....|.++|||++|+|+++|++++.|++
T Consensus 10 ~~~~~--~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~ 87 (357)
T PLN02514 10 TTGWA--ARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTV 87 (357)
T ss_pred EEEEE--EecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccC
Confidence 44444 4455677999999999999999999999999999999999887654456889999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGIT 170 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~t 170 (359)
||+|++.+....|++|.+|+.|.++.|.+..+.+......|...+|+|+||+++|...++++|+++++++++++++++.|
T Consensus 88 Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 167 (357)
T PLN02514 88 GDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVT 167 (357)
T ss_pred CCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHH
Confidence 99998766666799999999999999988644322212224445799999999999999999999999999999999999
Q ss_pred hhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccE
Q 018246 171 VYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDY 250 (359)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~ 250 (359)
||+++......++|++|+|+|+|++|++++|+|++.|++|+++++++++.+.+.+++|+++++++.+.+.+.+...++|+
T Consensus 168 a~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~D~ 247 (357)
T PLN02514 168 VYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSLDY 247 (357)
T ss_pred HHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHhcCCCcE
Confidence 99999887776899999999999999999999999999999999888888777678999888876655555555568999
Q ss_pred EEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcccEEEEcc
Q 018246 251 IIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADIELVRM 330 (359)
Q Consensus 251 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~~~~~~l 330 (359)
+||++|...++..++++++++|+++.+|......+++...++.+++++.|+......++++++++++++++++.+++|||
T Consensus 248 vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~~i~~~~l 327 (357)
T PLN02514 248 IIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLTSMIEVVKM 327 (357)
T ss_pred EEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCCcCcEEEEcH
Confidence 99999977668999999999999999998765567778888889999999999888899999999999999887888999
Q ss_pred ccHHHHHHHHHcCCccEEEEEEcCCCc
Q 018246 331 DQINTAMERLAKSDVKYRFVIDVGNSK 357 (359)
Q Consensus 331 ~~~~~a~~~~~~~~~~gkvvv~~~~~~ 357 (359)
+++.+||+.+.++...||+|+.++.+-
T Consensus 328 ~~~~~A~~~~~~~~~~gk~v~~~~~~~ 354 (357)
T PLN02514 328 DYVNTAFERLEKNDVRYRFVVDVAGSN 354 (357)
T ss_pred HHHHHHHHHHHcCCCceeEEEEccccc
Confidence 999999999999988899999987753
No 8
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=3.1e-51 Score=383.51 Aligned_cols=338 Identities=25% Similarity=0.433 Sum_probs=287.4
Q ss_pred cceeeeeecCC------CCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCC
Q 018246 11 QKAIGWAARDN------TGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNN 84 (359)
Q Consensus 11 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~ 84 (359)
||++.+..++. ++.+++.+++.|+|+++||+|||.+++||++|++.+.|.++ ..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence 67888887654 47799999999999999999999999999999999988754 356889999999999999999
Q ss_pred CCCCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccc-cccC--------C-----CCCCCCccceEEEeeCCceE
Q 018246 85 VSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYN-SIDR--------D-----GTKTYGGYSDLIVVDQHYVL 150 (359)
Q Consensus 85 v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~~~~--------~-----g~~~~g~~a~~~~~~~~~~~ 150 (359)
++++++||||++.+.. .|+.|.+|+.|.++.|.++..... +... + +...+|+|+||+++|++.++
T Consensus 80 v~~~~~GdrV~~~~~~-~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVFVP-SCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEccCC-CCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence 9999999999765543 899999999999999988643210 1000 0 01123799999999999999
Q ss_pred ECCCCCCccccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCC
Q 018246 151 RFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGA 229 (359)
Q Consensus 151 ~lp~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~ 229 (359)
++|+++++++++.+.++..|||+++.....+++|++|||.|+|++|++++|+|+..|+ +|++++++++|++.+ +++|+
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~Ga 237 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RELGA 237 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHcCC
Confidence 9999999999999999999999998777777999999999999999999999999999 799999999999888 89999
Q ss_pred cEEecCCCHHH---HHHhcC-CccEEEECCCChhhHHHHHhccccCCEEEEecCCCC--CeeeCHHHHHhcCcEEEEeec
Q 018246 230 DAFLVSSDPAK---VKAAMG-TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK--PLEVPIFALVGARRLVGGSNV 303 (359)
Q Consensus 230 ~~v~~~~~~~~---~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~ 303 (359)
++++++.+.+. +.+++. ++|++|||+|...++..++++++++|+++.+|.... ..+++...++.|++++.|+..
T Consensus 238 ~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 317 (371)
T cd08281 238 TATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYM 317 (371)
T ss_pred ceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEec
Confidence 99998876543 333443 799999999987778999999999999999997643 456788888899999999877
Q ss_pred CC---HHHHHHHHHHHHhCCCcc--cE-EEEccccHHHHHHHHHcCCccEEEEE
Q 018246 304 GG---MKETQEMLDFCAKHNIAA--DI-ELVRMDQINTAMERLAKSDVKYRFVI 351 (359)
Q Consensus 304 ~~---~~~~~~~~~~l~~g~i~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvv 351 (359)
.. ..+++++++++++|++++ .+ ++|+|+++++||+.+.+++..+|+|+
T Consensus 318 ~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 318 GSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred CCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 54 467999999999999964 33 89999999999999999988777664
No 9
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=3.3e-51 Score=376.85 Aligned_cols=315 Identities=26% Similarity=0.448 Sum_probs=279.0
Q ss_pred CCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEeccccC
Q 018246 23 GTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVAS 102 (359)
Q Consensus 23 ~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~~~~ 102 (359)
..+++++++.|.|+++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|++++.|++||||++.+....
T Consensus 13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 92 (329)
T TIGR02822 13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRT 92 (329)
T ss_pred CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCc
Confidence 46889999999999999999999999999999999887654445789999999999999999999999999988776668
Q ss_pred CCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhhhhHhHhcCCCC
Q 018246 103 CQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTE 182 (359)
Q Consensus 103 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~~~~ 182 (359)
|+.|.+|..|.++.|+.+.+. |...+|+|+||+.+|++.++++|+++++++++++++.+.|||+++.. ..++
T Consensus 93 c~~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~-~~~~ 164 (329)
T TIGR02822 93 CGVCRYCRRGAENLCPASRYT-------GWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR-ASLP 164 (329)
T ss_pred CCCChHHhCcCcccCCCcccC-------CcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh-cCCC
Confidence 999999999999999986542 33456999999999999999999999999999999999999999975 4569
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhhHH
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLA 262 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 262 (359)
+|++|||+|+|++|++++|+|+..|++|+++++++++.+.+ +++|+++++++.+.. .+++|+++++.+...++.
T Consensus 165 ~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a-~~~Ga~~vi~~~~~~-----~~~~d~~i~~~~~~~~~~ 238 (329)
T TIGR02822 165 PGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAARRLA-LALGAASAGGAYDTP-----PEPLDAAILFAPAGGLVP 238 (329)
T ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHhCCceeccccccC-----cccceEEEECCCcHHHHH
Confidence 99999999999999999999999999999999999998887 899999998754321 236899999888777799
Q ss_pred HHHhccccCCEEEEecCCCC-CeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcccEEEEccccHHHHHHHHH
Q 018246 263 PLLGLLKVNGKLVTVGLPEK-PLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADIELVRMDQINTAMERLA 341 (359)
Q Consensus 263 ~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~~~~~~l~~~~~a~~~~~ 341 (359)
.++++++++|+++.+|...+ ...++...++.+++++.++......++.+++++++++++++.+++|+|+++++||+.+.
T Consensus 239 ~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~i~~~~~l~~~~~A~~~~~ 318 (329)
T TIGR02822 239 PALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVRVTTHTYPLSEADRALRDLK 318 (329)
T ss_pred HHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCeeEEEEEeHHHHHHHHHHHH
Confidence 99999999999999997533 34567777788999999988877888999999999999987668999999999999999
Q ss_pred cCCccEEEEE
Q 018246 342 KSDVKYRFVI 351 (359)
Q Consensus 342 ~~~~~gkvvv 351 (359)
+++..||+|+
T Consensus 319 ~~~~~Gkvvl 328 (329)
T TIGR02822 319 AGRFDGAAVL 328 (329)
T ss_pred cCCCceEEEe
Confidence 9998999987
No 10
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=5.1e-51 Score=378.23 Aligned_cols=332 Identities=22% Similarity=0.303 Sum_probs=275.8
Q ss_pred cccceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhc-cCCC--CCCCCCcccccccEEEEEeCCCC
Q 018246 9 HPQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCAR-NEWG--VTNYPIVPGHEIVGTVTKVGNNV 85 (359)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~V~~vG~~v 85 (359)
..+++.++. .++.+++++.+.| ++++||||||.++|||++|++.+. |..+ ...+|.++|||++|+|+++ ++
T Consensus 3 ~~~~~~~~~---~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v 76 (343)
T PRK09880 3 VKTQSCVVA---GKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DS 76 (343)
T ss_pred ccceEEEEe---cCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cC
Confidence 345555544 5566899998887 689999999999999999999875 4332 2456899999999999999 78
Q ss_pred CCCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCcccccccc
Q 018246 86 SKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLL 165 (359)
Q Consensus 86 ~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~ 165 (359)
++|++||||++.+.. +|+.|.+|+.|.++.|.+..+.... ......+|+|+||+++|++.++++|+++++++++ +.
T Consensus 77 ~~~~vGdrV~~~~~~-~cg~c~~c~~g~~~~c~~~~~~g~~--~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~ 152 (343)
T PRK09880 77 SGLKEGQTVAINPSK-PCGHCKYCLSHNENQCTTMRFFGSA--MYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FA 152 (343)
T ss_pred ccCCCCCEEEECCCC-CCcCChhhcCCChhhCCCcceeecc--cccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hh
Confidence 899999999887654 8999999999999999986542110 0001246999999999999999999999987654 45
Q ss_pred chhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHH--
Q 018246 166 CAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDPAKVK-- 242 (359)
Q Consensus 166 ~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~-- 242 (359)
.++.+||+++.+... .+|++|||.|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|+++++++++.+...
T Consensus 153 ~~~~~a~~al~~~~~-~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~lGa~~vi~~~~~~~~~~~ 230 (343)
T PRK09880 153 EPLAVAIHAAHQAGD-LQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REMGADKLVNPQNDDLDHYK 230 (343)
T ss_pred cHHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHcCCcEEecCCcccHHHHh
Confidence 567899999988766 689999999999999999999999999 799999999999888 889999999877643211
Q ss_pred HhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCc
Q 018246 243 AAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIA 322 (359)
Q Consensus 243 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~ 322 (359)
...+++|++||++|++.++..++++++++|+++.+|......+++...++.|++++.|+... ..+++++++++++++++
T Consensus 231 ~~~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~-~~~~~~~~~l~~~g~i~ 309 (343)
T PRK09880 231 AEKGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRF-TEEFNTAVSWLANGVIN 309 (343)
T ss_pred ccCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeec-cccHHHHHHHHHcCCCC
Confidence 11236999999999876689999999999999999986655678888888999999998764 46799999999999997
Q ss_pred c--cE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 323 A--DI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 323 ~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
+ .+ ++|+|+++++||+.+.++...||+++.+
T Consensus 310 ~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 310 PLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred chhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 5 34 8999999999999999887789999864
No 11
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-50 Score=347.21 Aligned_cols=329 Identities=26% Similarity=0.414 Sum_probs=289.4
Q ss_pred CCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEecc
Q 018246 20 DNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVL 99 (359)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~ 99 (359)
+...+|.+++++.++|+.+||+||+.++++|++|.+.+.|..+...+|.++|||++|+|+++|..|+.+++||+| +..+
T Consensus 15 ~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~vk~GD~V-iplf 93 (375)
T KOG0022|consen 15 EAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTTVKPGDHV-IPLF 93 (375)
T ss_pred cCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccccCCCCEE-eecc
Confidence 455669999999999999999999999999999999999987778889999999999999999999999999999 6778
Q ss_pred ccCCCCCccccCCCCCCCccccccc--ccccCCCCCCC-------------CccceEEEeeCCceEECCCCCCccccccc
Q 018246 100 VASCQKCESCQQGLENYCPNMILTY--NSIDRDGTKTY-------------GGYSDLIVVDQHYVLRFPDNMPLDAGAPL 164 (359)
Q Consensus 100 ~~~~~~c~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~-------------g~~a~~~~~~~~~~~~lp~~l~~~~aa~l 164 (359)
.+.|+.|.+|+++..|+|..+.... ....+||.++. -+|+||.++++..+++|++..+++.++.|
T Consensus 94 ~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLL 173 (375)
T KOG0022|consen 94 TPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLL 173 (375)
T ss_pred ccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCChhheeEe
Confidence 8899999999999999998885543 22233444432 38999999999999999999999999999
Q ss_pred cchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCH-----
Q 018246 165 LCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDP----- 238 (359)
Q Consensus 165 ~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~----- 238 (359)
.|...|+|.|.-+.+.++||+++.|.|-|.+|+++++-||..|| |++.++-++++.+.+ ++||+++.+|..+.
T Consensus 174 gCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~a-k~fGaTe~iNp~d~~~~i~ 252 (375)
T KOG0022|consen 174 GCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKA-KEFGATEFINPKDLKKPIQ 252 (375)
T ss_pred eccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHH-HhcCcceecChhhccccHH
Confidence 99999999999999999999999999999999999999999999 999999999999999 99999999998853
Q ss_pred HHHHHhcC-CccEEEECCCChhhHHHHHhccccC-CEEEEecCCCC--CeeeCHHHHHhcCcEEEEeecCC---HHHHHH
Q 018246 239 AKVKAAMG-TMDYIIDTVSAVHSLAPLLGLLKVN-GKLVTVGLPEK--PLEVPIFALVGARRLVGGSNVGG---MKETQE 311 (359)
Q Consensus 239 ~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~~~---~~~~~~ 311 (359)
+.+.++++ |+|+.|||+|+..++..++.+...+ |+-+.+|.... .+++..++++ ++.++.|+.++. +.++..
T Consensus 253 evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~-~GR~~~Gs~FGG~K~~~~iP~ 331 (375)
T KOG0022|consen 253 EVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLV-TGRTWKGSAFGGFKSKSDIPK 331 (375)
T ss_pred HHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhc-cccEEEEEecccccchhhhhH
Confidence 45666775 9999999999999999999999888 99999998664 4556666654 577888877765 477888
Q ss_pred HHHHHHhCCCcc--c-EEEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 312 MLDFCAKHNIAA--D-IELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 312 ~~~~l~~g~i~~--~-~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
+++...+++++. . +|.+||+++++||+.|.+++.. |.|+.
T Consensus 332 lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~ 374 (375)
T KOG0022|consen 332 LVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW 374 (375)
T ss_pred HHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence 899999998853 3 3999999999999999999875 77765
No 12
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=2.2e-50 Score=373.71 Aligned_cols=329 Identities=25% Similarity=0.403 Sum_probs=281.9
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGV-TNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
|+++++. .++.+++.+++.|.++++||+||+.++++|++|++.+.|.+.. ...|.++|||++|+|+++|++++.++
T Consensus 1 mka~~~~---~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (339)
T cd08239 1 MRGAVFP---GDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFR 77 (339)
T ss_pred CeEEEEe---cCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCC
Confidence 5677655 4567999999999999999999999999999999988775432 23578999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhh
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGI 169 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ 169 (359)
+||||++.+.. .|+.|.+|+.|.++.|.+..+. .|...+|+|++|+++|+++++++|+++++++++.+++++.
T Consensus 78 ~Gd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~------~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ 150 (339)
T cd08239 78 VGDRVMVYHYV-GCGACRNCRRGWMQLCTSKRAA------YGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIG 150 (339)
T ss_pred CCCEEEECCCC-CCCCChhhhCcCcccCcCcccc------cccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHH
Confidence 99999776554 8999999999999999876431 1334579999999999999999999999999999999999
Q ss_pred hhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHH--HHHHhcC
Q 018246 170 TVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISTSPKKESEAISKLGADAFLVSSDPA--KVKAAMG 246 (359)
Q Consensus 170 ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~-V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~ 246 (359)
|||+++.... +++|++|||+|+|++|++++|+|+++|++ |+++++++++.+.+ +++|+++++++++.+ .+.+++.
T Consensus 151 ta~~~l~~~~-~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~ 228 (339)
T cd08239 151 TAYHALRRVG-VSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELA-KALGADFVINSGQDDVQEIRELTS 228 (339)
T ss_pred HHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCEEEcCCcchHHHHHHHhC
Confidence 9999997665 48899999999999999999999999997 99999999998888 899999999886643 2333333
Q ss_pred --CccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeC-HHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcc
Q 018246 247 --TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVP-IFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAA 323 (359)
Q Consensus 247 --~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~ 323 (359)
++|++||++|+...+..++++++++|+++.+|.... .+++ ...++.+++++.|+...+.++++++++++.++++++
T Consensus 229 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~ 307 (339)
T cd08239 229 GAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEV 307 (339)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCCh
Confidence 799999999998767889999999999999987553 2333 345778999999999888889999999999999864
Q ss_pred --cE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 324 --DI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 324 --~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
.+ ++|+|+++++||+.+.++. .||+|+.+
T Consensus 308 ~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 308 DRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred hHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 34 8899999999999988875 69999874
No 13
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1.9e-50 Score=368.00 Aligned_cols=309 Identities=26% Similarity=0.418 Sum_probs=267.7
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccC-CCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNE-WGVTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
|+++.+..++.+..+++.+++.|.|++|||||||+++++|+.|++.+.|. .+..++|+++|.|++|+|+++|++|+.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 67777777777777999999999999999999999999999999999997 33456899999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhh
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGI 169 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ 169 (359)
+||||+.... . ..+|+|+||+++|++.++++|+++++++||+++++++
T Consensus 81 ~GdrV~~~~~--~------------------------------~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~ 128 (326)
T COG0604 81 VGDRVAALGG--V------------------------------GRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGL 128 (326)
T ss_pred CCCEEEEccC--C------------------------------CCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHH
Confidence 9999975420 0 0459999999999999999999999999999999999
Q ss_pred hhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHhc
Q 018246 170 TVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK---VKAAM 245 (359)
Q Consensus 170 ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~ 245 (359)
|||++++....+++|++|||+|+ |++|.+++|+|+++|++++++.+++++.+.+ +++|+++++++++.+. +.+++
T Consensus 129 TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~-~~lGAd~vi~y~~~~~~~~v~~~t 207 (326)
T COG0604 129 TAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELL-KELGADHVINYREEDFVEQVRELT 207 (326)
T ss_pred HHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHH-HhcCCCEEEcCCcccHHHHHHHHc
Confidence 99999999888899999999985 9999999999999999888888888887755 9999999999887644 44555
Q ss_pred C--CccEEEECCCChhhHHHHHhccccCCEEEEecCCCC--CeeeCHHHHHhcCcEEEEeecCCH------HHHHHHHHH
Q 018246 246 G--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK--PLEVPIFALVGARRLVGGSNVGGM------KETQEMLDF 315 (359)
Q Consensus 246 ~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~~~~------~~~~~~~~~ 315 (359)
+ ++|+|+|++|+.. +..++++|+++|+++.+|..++ ...++...++.+.+++.|...... +.++++.++
T Consensus 208 ~g~gvDvv~D~vG~~~-~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~ 286 (326)
T COG0604 208 GGKGVDVVLDTVGGDT-FAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDL 286 (326)
T ss_pred CCCCceEEEECCCHHH-HHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHH
Confidence 4 6999999999988 8889999999999999998763 556777888888999988777655 447789999
Q ss_pred HHhCCCcccE-EEEccccHHHHHHHHHc-CCccEEEEEEc
Q 018246 316 CAKHNIAADI-ELVRMDQINTAMERLAK-SDVKYRFVIDV 353 (359)
Q Consensus 316 l~~g~i~~~~-~~~~l~~~~~a~~~~~~-~~~~gkvvv~~ 353 (359)
+.+|++++.+ .+|||++..++...... ++..||+|+++
T Consensus 287 ~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 287 LASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred HHcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 9999999999 69999996555554444 47789999974
No 14
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=1.5e-49 Score=370.47 Aligned_cols=337 Identities=23% Similarity=0.405 Sum_probs=283.2
Q ss_pred ccceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 10 PQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
+||++++..++ +.+++++++.|.|+++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++|+
T Consensus 1 ~mka~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (358)
T TIGR03451 1 TVRGVIARSKG--APVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVA 77 (358)
T ss_pred CcEEEEEccCC--CCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccC
Confidence 58888877543 3488899999999999999999999999999999988654 34688999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCccccccccccc-CCCC-----CCCCccceEEEeeCCceEECCCCCCcccccc
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSID-RDGT-----KTYGGYSDLIVVDQHYVLRFPDNMPLDAGAP 163 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~-~~g~-----~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~ 163 (359)
+||||++.+.. .|+.|.+|..|.+++|........... .+|. ...|+|+||+.+|+..++++|+++++++++.
T Consensus 78 ~GdrV~~~~~~-~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~ 156 (358)
T TIGR03451 78 PGDYVVLNWRA-VCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGL 156 (358)
T ss_pred CCCEEEEccCC-CCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhh
Confidence 99999877654 899999999999999986422111000 0111 1359999999999999999999999999999
Q ss_pred ccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHH---
Q 018246 164 LLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDPA--- 239 (359)
Q Consensus 164 l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~--- 239 (359)
+++.+.|||+++.....+++|++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+ +++|+++++++++.+
T Consensus 157 l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~Ga~~~i~~~~~~~~~ 235 (358)
T TIGR03451 157 LGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REFGATHTVNSSGTDPVE 235 (358)
T ss_pred hcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEEcCCCcCHHH
Confidence 999999999888777777999999999999999999999999999 599999999999888 899999999876543
Q ss_pred HHHHhcC--CccEEEECCCChhhHHHHHhccccCCEEEEecCCCC--CeeeCHHHHHhcCcEEEEeecC---CHHHHHHH
Q 018246 240 KVKAAMG--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK--PLEVPIFALVGARRLVGGSNVG---GMKETQEM 312 (359)
Q Consensus 240 ~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~~---~~~~~~~~ 312 (359)
.+.+.++ ++|++||++|+..++..++++++++|+++.+|.... ..+++...++.+++++.++... ...+++++
T Consensus 236 ~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 315 (358)
T TIGR03451 236 AIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPML 315 (358)
T ss_pred HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHH
Confidence 3444443 799999999987678999999999999999998654 3567777888899999987643 35779999
Q ss_pred HHHHHhCCCcc--cE-EEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 313 LDFCAKHNIAA--DI-ELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 313 ~~~l~~g~i~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
++++++|++++ .+ ++|||+++++||+.+.+++.. |+++.
T Consensus 316 ~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 316 VDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred HHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 99999999975 33 899999999999999888764 77765
No 15
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.3e-49 Score=371.93 Aligned_cols=341 Identities=23% Similarity=0.362 Sum_probs=282.1
Q ss_pred CCcccceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC-CCCCCCcccccccEEEEEeCCCC
Q 018246 7 TEHPQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGNNV 85 (359)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v 85 (359)
.+.+|+++.+.. ..+.+++.+++.|.|+++||+|||.++|+|++|++.+.|..+ ...+|.++|||++|+|+++|+++
T Consensus 7 ~~~~mka~~~~~--~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v 84 (381)
T PLN02740 7 KVITCKAAVAWG--PGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGV 84 (381)
T ss_pred cceeeEEEEEec--CCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCC
Confidence 446788877654 334578889999999999999999999999999999988753 23568899999999999999999
Q ss_pred CCCCCCCEEEEeccccCCCCCccccCCCCCCCcccccc-ccccc-CCC---------------CCCCCccceEEEeeCCc
Q 018246 86 SKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILT-YNSID-RDG---------------TKTYGGYSDLIVVDQHY 148 (359)
Q Consensus 86 ~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~-~~~~~-~~g---------------~~~~g~~a~~~~~~~~~ 148 (359)
++|++||||++.+.. .|+.|.+|..|.++.|.++... +.... .+| ...+|+|+||+++|.+.
T Consensus 85 ~~~~vGdrV~~~~~~-~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~ 163 (381)
T PLN02740 85 EDLKAGDHVIPIFNG-ECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSAC 163 (381)
T ss_pred CcCCCCCEEEecCCC-CCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHH
Confidence 999999999877654 8999999999999999986532 10000 000 11359999999999999
Q ss_pred eEECCCCCCccccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHc
Q 018246 149 VLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKL 227 (359)
Q Consensus 149 ~~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~ 227 (359)
++++|+++++++++.+++++.|||+++.....+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++
T Consensus 164 ~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~ 242 (381)
T PLN02740 164 VVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEM 242 (381)
T ss_pred eEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHc
Confidence 999999999999999999999999988777777999999999999999999999999999 699999999999988 899
Q ss_pred CCcEEecCCCH-----HHHHHhcC-CccEEEECCCChhhHHHHHhccccC-CEEEEecCCCCC--eeeCHHHHHhcCcEE
Q 018246 228 GADAFLVSSDP-----AKVKAAMG-TMDYIIDTVSAVHSLAPLLGLLKVN-GKLVTVGLPEKP--LEVPIFALVGARRLV 298 (359)
Q Consensus 228 g~~~v~~~~~~-----~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~k~~~i 298 (359)
|++++++.++. +.+.++++ ++|++||++|+..++..++.+++++ |+++.+|..... .+++...+ .+++++
T Consensus 243 Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~-~~~~~i 321 (381)
T PLN02740 243 GITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMEL-FDGRSI 321 (381)
T ss_pred CCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHH-hcCCeE
Confidence 99999987642 23444444 7999999999877789999999996 999999976543 33444433 378899
Q ss_pred EEeecCC---HHHHHHHHHHHHhCCCcc--cE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 299 GGSNVGG---MKETQEMLDFCAKHNIAA--DI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 299 ~g~~~~~---~~~~~~~~~~l~~g~i~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
.|+..++ ..++.++++++.++++++ .+ ++|+|+|+++||+.+.+++. .|++|++
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~ 381 (381)
T PLN02740 322 TGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL 381 (381)
T ss_pred EEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence 9887654 357899999999999864 34 89999999999999988765 6999864
No 16
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=4.7e-49 Score=368.89 Aligned_cols=337 Identities=23% Similarity=0.334 Sum_probs=279.0
Q ss_pred ccceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 10 PQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
.|+++++. +..+.+++.+++.|.|+++||+|||.++|+|++|++.+.|.. .+|.++|||++|+|+++|+++++|+
T Consensus 12 ~mka~~~~--~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~ 86 (378)
T PLN02827 12 TCRAAVAW--GAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFE 86 (378)
T ss_pred eeEEEEEe--cCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccC
Confidence 46666554 455568899999999999999999999999999999887642 3578999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCccccccccccc---------CCC-----CCCCCccceEEEeeCCceEECCCC
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSID---------RDG-----TKTYGGYSDLIVVDQHYVLRFPDN 155 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~---------~~g-----~~~~g~~a~~~~~~~~~~~~lp~~ 155 (359)
+||||++.+.. .|++|.+|+.|.++.|.++.....+.. ..| ...+|+|+||+++|++.++++|++
T Consensus 87 ~GdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~ 165 (378)
T PLN02827 87 KGDHVLTVFTG-ECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPL 165 (378)
T ss_pred CCCEEEEecCC-CCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCC
Confidence 99999877544 899999999999999987532111000 001 113489999999999999999999
Q ss_pred CCccccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEec
Q 018246 156 MPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLV 234 (359)
Q Consensus 156 l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~ 234 (359)
+++++++.+.+++.++|+++.....+++|++|||+|+|++|++++|+|+++|+ +|+++++++++.+.+ +++|++++++
T Consensus 166 l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~lGa~~~i~ 244 (378)
T PLN02827 166 APLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTFGVTDFIN 244 (378)
T ss_pred CCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCcEEEc
Confidence 99999999999888999887666677999999999999999999999999999 588888899998888 8999999998
Q ss_pred CCCH-----HHHHHhcC-CccEEEECCCChhhHHHHHhccccC-CEEEEecCCCCCeeeCH-HHHHhcCcEEEEeecCC-
Q 018246 235 SSDP-----AKVKAAMG-TMDYIIDTVSAVHSLAPLLGLLKVN-GKLVTVGLPEKPLEVPI-FALVGARRLVGGSNVGG- 305 (359)
Q Consensus 235 ~~~~-----~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~k~~~i~g~~~~~- 305 (359)
+++. ..+.+++. ++|++||++|....+..+++.++++ |+++.+|.......++. ..++.+++++.|+....
T Consensus 245 ~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (378)
T PLN02827 245 PNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGW 324 (378)
T ss_pred ccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCC
Confidence 7642 22344443 7999999999876689999999998 99999998654444433 35678999999987653
Q ss_pred --HHHHHHHHHHHHhCCCcc--cE-EEEccccHHHHHHHHHcCCccEEEEEEcC
Q 018246 306 --MKETQEMLDFCAKHNIAA--DI-ELVRMDQINTAMERLAKSDVKYRFVIDVG 354 (359)
Q Consensus 306 --~~~~~~~~~~l~~g~i~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 354 (359)
..++++++++++++++++ .+ ++|+|+++++||+.+.+++. +|+||.+.
T Consensus 325 ~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~ 377 (378)
T PLN02827 325 KPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP 377 (378)
T ss_pred chhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence 357899999999999987 45 89999999999999998876 79999764
No 17
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=3.8e-49 Score=364.18 Aligned_cols=324 Identities=27% Similarity=0.385 Sum_probs=267.1
Q ss_pred ccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCC-cccccccEEEEEeCCCCCCCCCCCEEEEeccccCC
Q 018246 25 FSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPI-VPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASC 103 (359)
Q Consensus 25 ~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~~~~~ 103 (359)
.++++.+.|.+.|+||+|||.++|||+||++.++|..+....+. ++|||++|+|+++| .++.+++||||++.+.. .|
T Consensus 13 ~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~-~C 90 (350)
T COG1063 13 VRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNI-PC 90 (350)
T ss_pred cccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCCCEEEECCCc-CC
Confidence 34666666678999999999999999999999999876555555 89999999999999 77889999999887665 99
Q ss_pred CCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCc-eEECCCCCCccccccccchhhhhhhHhHhcCCCC
Q 018246 104 QKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHY-VLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTE 182 (359)
Q Consensus 104 ~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~-~~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~~~~ 182 (359)
+.|.+|+.|.++.|.+..+. +....+...+|+|+||+++|.++ +.++|+++ ..+++++..++.+++++.......+
T Consensus 91 g~C~~C~~G~~~~C~~~~~~--g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~~~~~~ 167 (350)
T COG1063 91 GHCRYCRAGEYNLCENPGFY--GYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAERAAVR 167 (350)
T ss_pred CCChhHhCcCcccCCCcccc--ccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhhccCCC
Confidence 99999999999999955422 11111122679999999999755 44558988 6777888888999988754444436
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCH---HHHHHhcC--CccEEEECCC
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDP---AKVKAAMG--TMDYIIDTVS 256 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~--~~d~vid~~g 256 (359)
++++|+|+|+|++|++++++++.+|+ +|++++++++|++.+.+.+|++.+++.... ..+.++++ ++|++|||+|
T Consensus 168 ~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~G 247 (350)
T COG1063 168 PGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVG 247 (350)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECCC
Confidence 66699999999999999999999998 899999999999999433777777766542 23445554 6999999999
Q ss_pred ChhhHHHHHhccccCCEEEEecCCCCCe-eeCHHHHHhcCcEEEEeec-CCHHHHHHHHHHHHhCCCccc---EEEEccc
Q 018246 257 AVHSLAPLLGLLKVNGKLVTVGLPEKPL-EVPIFALVGARRLVGGSNV-GGMKETQEMLDFCAKHNIAAD---IELVRMD 331 (359)
Q Consensus 257 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~k~~~i~g~~~-~~~~~~~~~~~~l~~g~i~~~---~~~~~l~ 331 (359)
...++..+++.++++|+++.+|...... .++...++.|++++.|+.. ....+|+.+++++++|++.+. .++++++
T Consensus 248 ~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~ 327 (350)
T COG1063 248 SPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDPEKLITHRLPLD 327 (350)
T ss_pred CHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCCChhHceEeeccHH
Confidence 9888999999999999999999987655 6888899999999999965 666789999999999999764 4889999
Q ss_pred cHHHHHHHHHcCCc-cEEEEEEc
Q 018246 332 QINTAMERLAKSDV-KYRFVIDV 353 (359)
Q Consensus 332 ~~~~a~~~~~~~~~-~gkvvv~~ 353 (359)
++++||+.+.+.+. ..|+++.+
T Consensus 328 ~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 328 DAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred HHHHHHHHHHhcCCCeEEEEecC
Confidence 99999999998654 56888763
No 18
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=8e-49 Score=366.58 Aligned_cols=337 Identities=24% Similarity=0.353 Sum_probs=275.9
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
|++..+.. .++.+++++++.|+|+++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++
T Consensus 2 ~~a~~~~~--~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~ 79 (368)
T TIGR02818 2 SRAAVAWA--AGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKV 79 (368)
T ss_pred ceEEEEec--CCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCC
Confidence 56665553 4556889999999999999999999999999999999887655567899999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccc-cc--------cCCC-----CCCCCccceEEEeeCCceEECCCCC
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYN-SI--------DRDG-----TKTYGGYSDLIVVDQHYVLRFPDNM 156 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~~--------~~~g-----~~~~g~~a~~~~~~~~~~~~lp~~l 156 (359)
||||++.+. ..|++|.+|+.|.++.|.++..... +. ..+| ...+|+|+||+++|++.++++|+++
T Consensus 80 GdrV~~~~~-~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l 158 (368)
T TIGR02818 80 GDHVIPLYT-AECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA 158 (368)
T ss_pred CCEEEEcCC-CCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence 999977654 4899999999999999987532100 00 0011 0124799999999999999999999
Q ss_pred CccccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecC
Q 018246 157 PLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVS 235 (359)
Q Consensus 157 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~ 235 (359)
++++++++++++.|||+++.....+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|+++++++
T Consensus 159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~Ga~~~i~~ 237 (368)
T TIGR02818 159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKLGATDCVNP 237 (368)
T ss_pred CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCeEEcc
Confidence 9999999999999999998777777999999999999999999999999999 899999999999888 89999999987
Q ss_pred CC--H---HHHHHhcC-CccEEEECCCChhhHHHHHhccccC-CEEEEecCCCC--CeeeCHHHHHhcCcEEEEeecC--
Q 018246 236 SD--P---AKVKAAMG-TMDYIIDTVSAVHSLAPLLGLLKVN-GKLVTVGLPEK--PLEVPIFALVGARRLVGGSNVG-- 304 (359)
Q Consensus 236 ~~--~---~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~~-- 304 (359)
++ . +.+.+++. ++|++||++|+..++..++++++++ |+++.+|.... ...+....++. +..+.++...
T Consensus 238 ~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~ 316 (368)
T TIGR02818 238 NDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT-GRVWRGSAFGGV 316 (368)
T ss_pred cccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc-cceEEEeeccCC
Confidence 63 2 23444443 8999999999877789999999886 99999997542 34444444443 4456776543
Q ss_pred -CHHHHHHHHHHHHhCCCcc--cE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 305 -GMKETQEMLDFCAKHNIAA--DI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 305 -~~~~~~~~~~~l~~g~i~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
...++.+++++++++++++ .+ ++|+|+++++||+.+.+++. +|++|.+
T Consensus 317 ~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 317 KGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred CcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 3467999999999999864 34 89999999999999987764 7999864
No 19
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=3.6e-48 Score=362.00 Aligned_cols=336 Identities=26% Similarity=0.399 Sum_probs=279.4
Q ss_pred ccceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 10 PQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
++|++++. +.++.+++++++.|.++++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++++
T Consensus 2 ~~ka~~~~--~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 78 (365)
T cd08277 2 KCKAAVAW--EAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLK 78 (365)
T ss_pred ccEEEEEc--cCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCC
Confidence 45665554 3445689999999999999999999999999999999988755 45688999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCC-------------CCCCCccceEEEeeCCceEECCCCC
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDG-------------TKTYGGYSDLIVVDQHYVLRFPDNM 156 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g-------------~~~~g~~a~~~~~~~~~~~~lp~~l 156 (359)
+||||++.+. ..|++|.+|..|.+++|.++.+...+...++ ....|+|+||+++++++++++|+++
T Consensus 79 ~GdrV~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l 157 (365)
T cd08277 79 PGDKVIPLFI-GQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA 157 (365)
T ss_pred CCCEEEECCC-CCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCC
Confidence 9999976544 4999999999999999998765433222211 1135899999999999999999999
Q ss_pred CccccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecC
Q 018246 157 PLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVS 235 (359)
Q Consensus 157 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~ 235 (359)
++++++++.+++.|||+++.....+++|++|||+|+|++|++++++|+.+|+ +|+++++++++.+.+ +++|++++++.
T Consensus 158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~~i~~ 236 (365)
T cd08277 158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEFGATDFINP 236 (365)
T ss_pred CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCcEecc
Confidence 9999999999999999998777777999999999999999999999999999 799999999999888 88999999887
Q ss_pred CCH-----HHHHHhc-CCccEEEECCCChhhHHHHHhccccC-CEEEEecCCCC-CeeeCHHHHHhcCcEEEEeecCC--
Q 018246 236 SDP-----AKVKAAM-GTMDYIIDTVSAVHSLAPLLGLLKVN-GKLVTVGLPEK-PLEVPIFALVGARRLVGGSNVGG-- 305 (359)
Q Consensus 236 ~~~-----~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~-- 305 (359)
.+. +.+.+++ +++|++||++|+...+..++++++++ |+++.+|...+ ..+++...++. ++++.|+..+.
T Consensus 237 ~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~ 315 (365)
T cd08277 237 KDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGFK 315 (365)
T ss_pred ccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCCC
Confidence 542 2344444 38999999999877689999999885 99999997653 34566666654 78998887654
Q ss_pred -HHHHHHHHHHHHhCCCc--ccE-EEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 306 -MKETQEMLDFCAKHNIA--ADI-ELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 306 -~~~~~~~~~~l~~g~i~--~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
..+++++++++++++++ +.+ ++|+|+++++||+.+.+++ ..|+++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i~ 365 (365)
T cd08277 316 SRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVIT 365 (365)
T ss_pred hHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEeeC
Confidence 35789999999999875 334 8999999999999998877 4688863
No 20
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=3.8e-48 Score=362.64 Aligned_cols=336 Identities=22% Similarity=0.356 Sum_probs=279.6
Q ss_pred ccceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 10 PQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
+|+++.+.. .++.+++++++.|+|+++||+|||.++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|+
T Consensus 2 ~~ka~~~~~--~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 79 (369)
T cd08301 2 TCKAAVAWE--AGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLK 79 (369)
T ss_pred ccEEEEEec--CCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccc
Confidence 577777664 445689999999999999999999999999999999988766566789999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCccccccc--ccccCC--------C-----CCCCCccceEEEeeCCceEECCC
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTY--NSIDRD--------G-----TKTYGGYSDLIVVDQHYVLRFPD 154 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~--~~~~~~--------g-----~~~~g~~a~~~~~~~~~~~~lp~ 154 (359)
+||||++.+. ..|++|.+|..|.++.|.++.... +....+ | ....|+|+||+++|+..++++|+
T Consensus 80 ~GdrV~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~ 158 (369)
T cd08301 80 PGDHVLPVFT-GECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINP 158 (369)
T ss_pred cCCEEEEccC-CCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCC
Confidence 9999976654 489999999999999999864321 000000 0 11348999999999999999999
Q ss_pred CCCccccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEe
Q 018246 155 NMPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFL 233 (359)
Q Consensus 155 ~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~ 233 (359)
++++++++.+++...|||+++.....+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.+.+ +++|++.++
T Consensus 159 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~Ga~~~i 237 (369)
T cd08301 159 EAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGVTEFV 237 (369)
T ss_pred CCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEE
Confidence 999999999999999999988777777999999999999999999999999999 899999999999888 899999988
Q ss_pred cCCC--H---HHHHHhcC-CccEEEECCCChhhHHHHHhccccC-CEEEEecCCCC--CeeeCHHHHHhcCcEEEEeecC
Q 018246 234 VSSD--P---AKVKAAMG-TMDYIIDTVSAVHSLAPLLGLLKVN-GKLVTVGLPEK--PLEVPIFALVGARRLVGGSNVG 304 (359)
Q Consensus 234 ~~~~--~---~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~~ 304 (359)
++.+ . +.+.++.+ ++|++||++|+...+..++++++++ |+++.+|.... ..+++...++ +++++.|+...
T Consensus 238 ~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~ 316 (369)
T cd08301 238 NPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-NGRTLKGTLFG 316 (369)
T ss_pred cccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-cCCeEEEEecC
Confidence 8764 1 22334443 7999999999877688999999996 99999998653 3445544444 68999998664
Q ss_pred C---HHHHHHHHHHHHhCCCcc--cE-EEEccccHHHHHHHHHcCCccEEEEE
Q 018246 305 G---MKETQEMLDFCAKHNIAA--DI-ELVRMDQINTAMERLAKSDVKYRFVI 351 (359)
Q Consensus 305 ~---~~~~~~~~~~l~~g~i~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvv 351 (359)
. ..+++++++++.+++++. .+ ++|||+++++||+.+.+++. .|+++
T Consensus 317 ~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~~ 368 (369)
T cd08301 317 GYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGEC-LRCIL 368 (369)
T ss_pred CCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCc-eeEEe
Confidence 3 357899999999998864 33 89999999999999998876 58886
No 21
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=2.9e-48 Score=360.63 Aligned_cols=318 Identities=26% Similarity=0.360 Sum_probs=275.0
Q ss_pred CccceeeecCCCCCCeEEEEEeeeecchhhhhhhccC-CCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEeccccC
Q 018246 24 TFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNE-WGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVAS 102 (359)
Q Consensus 24 ~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~~~~ 102 (359)
.+++++++.|.++++||+|||.++++|++|++.+.+. .+...+|.++|||++|+|+++|++++.+ +||||++.+.. .
T Consensus 10 ~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~-~ 87 (349)
T TIGR03201 10 PMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVI-P 87 (349)
T ss_pred CceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCC-C
Confidence 3888999999999999999999999999999887443 2234568899999999999999999887 99999877655 9
Q ss_pred CCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCC------CCCccccccccchhhhhhhHhH
Q 018246 103 CQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPD------NMPLDAGAPLLCAGITVYSPMK 176 (359)
Q Consensus 103 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~------~l~~~~aa~l~~~~~ta~~~l~ 176 (359)
|+.|.+|+.|.++.|.+..+. |...+|+|+||+++|++.++++|+ ++++++++++++++.|+|+++.
T Consensus 88 cg~c~~c~~g~~~~c~~~~~~-------g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~ 160 (349)
T TIGR03201 88 CGECELCKTGRGTICRAQKMP-------GNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV 160 (349)
T ss_pred CCCChhhhCcCcccCCCCCcc-------CcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH
Confidence 999999999999999875432 233469999999999999999999 8999999999999999999987
Q ss_pred hcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH---H---HHHHhcC--Cc
Q 018246 177 YYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDP---A---KVKAAMG--TM 248 (359)
Q Consensus 177 ~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~---~---~~~~~~~--~~ 248 (359)
.. .+++|++|+|+|+|++|++++|+|++.|++|+++++++++++.+ +++|+++++++.+. + .+.++++ ++
T Consensus 161 ~~-~~~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~-~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~ 238 (349)
T TIGR03201 161 QA-GLKKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM-KGFGADLTLNPKDKSAREVKKLIKAFAKARGL 238 (349)
T ss_pred hc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCceEecCccccHHHHHHHHHhhcccCCC
Confidence 64 45899999999999999999999999999999999999999888 88999999887552 2 2333443 66
Q ss_pred c----EEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcc-
Q 018246 249 D----YIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAA- 323 (359)
Q Consensus 249 d----~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~- 323 (359)
| ++|||+|+..++..++++++++|+++.+|.......+++..++.+++++.|+...+..++++++++++++++++
T Consensus 239 d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g~i~~~ 318 (349)
T TIGR03201 239 RSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDGKIQLG 318 (349)
T ss_pred CCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcCCCCcc
Confidence 5 89999999877888999999999999999876556777788888889999988777888999999999999964
Q ss_pred -cEEEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 324 -DIELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 324 -~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
.++.|||+++++||+.+.+++..||++++
T Consensus 319 ~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~ 348 (349)
T TIGR03201 319 PFVERRPLDQIEHVFAAAHHHKLKRRAILT 348 (349)
T ss_pred cceEEecHHHHHHHHHHHHcCCccceEEec
Confidence 45789999999999999999888999885
No 22
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=3.6e-48 Score=360.90 Aligned_cols=329 Identities=24% Similarity=0.317 Sum_probs=261.9
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCC---CCCCCcccccccEEEEEeCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGV---TNYPIVPGHEIVGTVTKVGNNVSK 87 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~ 87 (359)
|+++++.. +.+. +++.+++.|+|+++||||||+++++|++|++.+.|.++. ..+|.++|||++|+|+++|++ +.
T Consensus 1 mka~~~~~-~~~~-l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~ 77 (355)
T cd08230 1 MKAIAVKP-GKPG-VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SG 77 (355)
T ss_pred CceeEecC-CCCC-CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CC
Confidence 56777653 2333 899999999999999999999999999999999987532 235789999999999999999 99
Q ss_pred CCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccch
Q 018246 88 FKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCA 167 (359)
Q Consensus 88 ~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~ 167 (359)
|++||||++.+.. .|++|.+|+.|.+++|....+...+. ...+|+|+||+++|++.++++|++++ +. +++..+
T Consensus 78 ~~vGdrV~~~~~~-~cg~C~~c~~g~~~~c~~~~~~~~g~----~~~~G~~aey~~~~~~~~~~~P~~~~-~~-a~~~~p 150 (355)
T cd08230 78 LSPGDLVVPTVRR-PPGKCLNCRIGRPDFCETGEYTERGI----KGLHGFMREYFVDDPEYLVKVPPSLA-DV-GVLLEP 150 (355)
T ss_pred CCCCCEEEecccc-CCCcChhhhCcCcccCCCcceeccCc----CCCCccceeEEEeccccEEECCCCCC-cc-eeecch
Confidence 9999999766544 79999999999999998764322111 02469999999999999999999999 43 444445
Q ss_pred hhhhhhHhHhc------CCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeC---ChhhHHHHHHHcCCcEEecCCCH
Q 018246 168 GITVYSPMKYY------GMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVIST---SPKKESEAISKLGADAFLVSSDP 238 (359)
Q Consensus 168 ~~ta~~~l~~~------~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~---~~~~~~~~~~~~g~~~v~~~~~~ 238 (359)
+.+++.++... ...++|++|||.|+|++|++++|+|++.|++|+++++ ++++++.+ +++|++.+ ++.+.
T Consensus 151 ~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~-~~~Ga~~v-~~~~~ 228 (355)
T cd08230 151 LSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIV-EELGATYV-NSSKT 228 (355)
T ss_pred HHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCCEEe-cCCcc
Confidence 54444443221 1246899999999999999999999999999999998 57787777 89999874 55443
Q ss_pred HHHH-HhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCCC--CeeeC----HHHHHhcCcEEEEeecCCHHHHHH
Q 018246 239 AKVK-AAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK--PLEVP----IFALVGARRLVGGSNVGGMKETQE 311 (359)
Q Consensus 239 ~~~~-~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~----~~~~~~k~~~i~g~~~~~~~~~~~ 311 (359)
+... ....++|+|||++|+...+..+++.++++|+++.+|...+ ..+++ ...++.|++++.|+...+.+++++
T Consensus 229 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~ 308 (355)
T cd08230 229 PVAEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQ 308 (355)
T ss_pred chhhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHH
Confidence 2211 1234899999999987668999999999999999997664 34455 356778999999998888889999
Q ss_pred HHHHHHhCC------CcccE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 312 MLDFCAKHN------IAADI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 312 ~~~~l~~g~------i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
+++++.++. +++.+ ++|+++++++||+.+.++. +|+||++
T Consensus 309 ~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 309 AVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred HHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 999999877 44444 8999999999999886544 6999864
No 23
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.4e-47 Score=358.54 Aligned_cols=337 Identities=26% Similarity=0.373 Sum_probs=275.7
Q ss_pred ccceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 10 PQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
+|++..+. ..++.+++.+++.|.|+++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|+
T Consensus 2 ~~~a~~~~--~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~ 79 (368)
T cd08300 2 TCKAAVAW--EAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVK 79 (368)
T ss_pred cceEEEEe--cCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCC
Confidence 46666554 3455689999999999999999999999999999999988766556789999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCccccccc-ccccCC--------C-----CCCCCccceEEEeeCCceEECCCC
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTY-NSIDRD--------G-----TKTYGGYSDLIVVDQHYVLRFPDN 155 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~-~~~~~~--------g-----~~~~g~~a~~~~~~~~~~~~lp~~ 155 (359)
+||||++.+. ..|+.|.+|+.+.++.|.++.... .+...+ | ....|+|+||+++|++.++++|++
T Consensus 80 vGdrV~~~~~-~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 158 (368)
T cd08300 80 PGDHVIPLYT-PECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPE 158 (368)
T ss_pred CCCEEEEcCC-CCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCC
Confidence 9999976644 499999999999999998753210 000000 0 112479999999999999999999
Q ss_pred CCccccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEec
Q 018246 156 MPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLV 234 (359)
Q Consensus 156 l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~ 234 (359)
+++++++.+++++.|||+++.....+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|++++++
T Consensus 159 l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~lGa~~~i~ 237 (368)
T cd08300 159 APLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKFGATDCVN 237 (368)
T ss_pred CChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCEEEc
Confidence 99999999999999999998777777999999999999999999999999999 799999999999888 8999999998
Q ss_pred CCCH-----HHHHHhcC-CccEEEECCCChhhHHHHHhccccC-CEEEEecCCCC--CeeeCHHHHHhcCcEEEEeecC-
Q 018246 235 SSDP-----AKVKAAMG-TMDYIIDTVSAVHSLAPLLGLLKVN-GKLVTVGLPEK--PLEVPIFALVGARRLVGGSNVG- 304 (359)
Q Consensus 235 ~~~~-----~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~~- 304 (359)
+++. +.+.++++ ++|+|+|++|+...+..++++++++ |+++.+|.... ....+...+. ++.++.++...
T Consensus 238 ~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~ 316 (368)
T cd08300 238 PKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFGG 316 (368)
T ss_pred ccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEecc
Confidence 7652 22344444 7999999999876689999999886 99999997642 2344444443 34466665543
Q ss_pred --CHHHHHHHHHHHHhCCCcc--cE-EEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 305 --GMKETQEMLDFCAKHNIAA--DI-ELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 305 --~~~~~~~~~~~l~~g~i~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
...++.++++++.++++++ .+ ++|+|+++++||+.+.+++. .|++++
T Consensus 317 ~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 317 WKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred cCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 3567899999999999975 34 89999999999999987765 688874
No 24
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=2.3e-47 Score=358.13 Aligned_cols=336 Identities=22% Similarity=0.325 Sum_probs=264.1
Q ss_pred ccceeeeeecCCCCCccceeeecCCCC-------CCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeC
Q 018246 10 PQKAIGWAARDNTGTFSPFHFSRRETG-------ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVG 82 (359)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG 82 (359)
.|+++++. .++.+++++++.|+|+ ++||||||.++|||++|++++.|..+ ..+|.++|||++|+|+++|
T Consensus 2 ~mka~v~~---~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG 77 (393)
T TIGR02819 2 GNRGVVYL---GPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKG 77 (393)
T ss_pred CceEEEEe---cCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEc
Confidence 57887765 3456889999999874 68999999999999999999988654 3568999999999999999
Q ss_pred CCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCcccccc----cccccCCCCCCCCccceEEEeeCC--ceEECCCCC
Q 018246 83 NNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILT----YNSIDRDGTKTYGGYSDLIVVDQH--YVLRFPDNM 156 (359)
Q Consensus 83 ~~v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~g~~a~~~~~~~~--~~~~lp~~l 156 (359)
++|++|++||||++.+.. .|+.|.+|+.|.++.|.+.... +.+....+ ..+|+|+||+++|+. .++++|+++
T Consensus 78 ~~V~~~~vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~-~~~G~~aey~~v~~~~~~l~~vP~~~ 155 (393)
T TIGR02819 78 RDVEFIKIGDIVSVPFNI-ACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG-GWVGGQSEYVMVPYADFNLLKFPDRD 155 (393)
T ss_pred CccccccCCCEEEEeccc-CCCCChHHHCcCcccCcCCCCCCccceecccccC-CCCCceEEEEEechhhCceEECCCcc
Confidence 999999999999877654 7999999999999999975321 00110001 136999999999964 699999987
Q ss_pred Cc----cccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcE
Q 018246 157 PL----DAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISTSPKKESEAISKLGADA 231 (359)
Q Consensus 157 ~~----~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~-V~~v~~~~~~~~~~~~~~g~~~ 231 (359)
+. ++++++.+++.++|+++.. ..+++|++|||.|+|++|++++|+|+.+|++ |++++++++|++.+ +++|++.
T Consensus 156 ~~~~~~~~~a~l~~~~~ta~~a~~~-~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a-~~~Ga~~ 233 (393)
T TIGR02819 156 QALEKIRDLTMLSDIFPTGYHGAVT-AGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQA-RSFGCET 233 (393)
T ss_pred cccccccceeeeccHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH-HHcCCeE
Confidence 53 3567888889999999875 4568999999999999999999999999996 45556778888888 8899975
Q ss_pred EecCCCH---HHHHHhcC--CccEEEECCCCh--------------hhHHHHHhccccCCEEEEecCCC-C-C-------
Q 018246 232 FLVSSDP---AKVKAAMG--TMDYIIDTVSAV--------------HSLAPLLGLLKVNGKLVTVGLPE-K-P------- 283 (359)
Q Consensus 232 v~~~~~~---~~~~~~~~--~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~~-~-~------- 283 (359)
+.+.++. +.+.+++. ++|++||++|.+ .+++.+++.++++|+++.+|... + .
T Consensus 234 v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~ 313 (393)
T TIGR02819 234 VDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAA 313 (393)
T ss_pred EecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccc
Confidence 4433322 33445543 799999999986 36999999999999999999853 1 1
Q ss_pred ----eeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcc---cE-EEEccccHHHHHHHHHcCCccEEEEEEcC
Q 018246 284 ----LEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAA---DI-ELVRMDQINTAMERLAKSDVKYRFVIDVG 354 (359)
Q Consensus 284 ----~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~---~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 354 (359)
.++....++.+++++.+........+.++++++++|++++ .+ ++|||+++++||+.+.++. .+|++|.++
T Consensus 314 ~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~-~~Kvvi~~~ 391 (393)
T TIGR02819 314 KTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGA-AKKFVIDPH 391 (393)
T ss_pred cccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCC-ceEEEEeCC
Confidence 2334555567778887754333233478999999999864 34 6899999999999998775 489999864
No 25
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=6.2e-47 Score=349.71 Aligned_cols=331 Identities=31% Similarity=0.588 Sum_probs=289.8
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
||++.+. .+.+.+++++++.|+++++||+||+.++++|++|++.+.|..+....|.++|||++|+|+++|++++.+++
T Consensus 1 m~a~~~~--~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~ 78 (333)
T cd08296 1 YKAVQVT--EPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKV 78 (333)
T ss_pred CeEEEEc--cCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCC
Confidence 5666655 33356899999999999999999999999999999999886654456889999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGIT 170 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~t 170 (359)
||+|++.+....|++|.+|..|.++.|...... |...+|+|++|+.++.+.++++|+++++++++.+++.+.|
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~-------~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~t 151 (333)
T cd08296 79 GDRVGVGWHGGHCGTCDACRRGDFVHCENGKVT-------GVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVT 151 (333)
T ss_pred CCEEEeccccCCCCCChhhhCcCcccCCCCCcc-------CcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHH
Confidence 999988777779999999999999999876432 3334699999999999999999999999999999999999
Q ss_pred hhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhc--CCc
Q 018246 171 VYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAM--GTM 248 (359)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~--~~~ 248 (359)
||+++... .+.++++|||+|+|++|++++++|+++|++|+++++++++.+.+ +++|+++++++...+....+. .++
T Consensus 152 a~~~~~~~-~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~ 229 (333)
T cd08296 152 TFNALRNS-GAKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADLA-RKLGAHHYIDTSKEDVAEALQELGGA 229 (333)
T ss_pred HHHHHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHcCCcEEecCCCccHHHHHHhcCCC
Confidence 99999777 66999999999999999999999999999999999999998888 889999999877643322221 479
Q ss_pred cEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcccEEEE
Q 018246 249 DYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADIELV 328 (359)
Q Consensus 249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~~~~~ 328 (359)
|+++|+.|....+..++++++++|+++.+|......+++...++.+++++.++..+...+++.+++++.++++++.++.|
T Consensus 230 d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~ 309 (333)
T cd08296 230 KLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPMVETF 309 (333)
T ss_pred CEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCceEEEE
Confidence 99999987666689999999999999999987656677777788999999999888888999999999999998777889
Q ss_pred ccccHHHHHHHHHcCCccEEEEEE
Q 018246 329 RMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 329 ~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
+++++.+||+.+.+++.+||+|++
T Consensus 310 ~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 310 PLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred EHHHHHHHHHHHHCCCCceeEEeC
Confidence 999999999999999989999874
No 26
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=5e-48 Score=321.20 Aligned_cols=311 Identities=21% Similarity=0.281 Sum_probs=276.3
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
.+.+++...+..+.+++++.+.|+|+|+|++||..++|+|+-|..+++|.+...+.|++||-|++|+|+.+|++|+++++
T Consensus 9 ~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvtdrkv 88 (336)
T KOG1197|consen 9 LKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTDRKV 88 (336)
T ss_pred heEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCcccccc
Confidence 46778887788889999999999999999999999999999999999999977889999999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGIT 170 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~t 170 (359)
||||+... +.|.|+++..+|...++++|+.+++++||++...++|
T Consensus 89 GDrVayl~-----------------------------------~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lT 133 (336)
T KOG1197|consen 89 GDRVAYLN-----------------------------------PFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLT 133 (336)
T ss_pred ccEEEEec-----------------------------------cchhhheeccccceeeccCCcccCHHHHHHHHHHHHH
Confidence 99997552 5699999999999999999999999999999999999
Q ss_pred hhhHhHhcCCCCCCCEEEEEC-CchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhc----
Q 018246 171 VYSPMKYYGMTEPGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAM---- 245 (359)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~G-~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~---- 245 (359)
||.-++....+++|++||++. +|++|+++.|++|..|++++++.++.++.+.+ ++.|+.|.++++.+|.+++..
T Consensus 134 Ay~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~a-kenG~~h~I~y~~eD~v~~V~kiTn 212 (336)
T KOG1197|consen 134 AYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIA-KENGAEHPIDYSTEDYVDEVKKITN 212 (336)
T ss_pred HHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHH-HhcCCcceeeccchhHHHHHHhccC
Confidence 999999999999999999986 59999999999999999999999999998888 899999999999987766653
Q ss_pred -CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCCC-eeeCHHHHHhcCcEEEEeecCC----HH----HHHHHHHH
Q 018246 246 -GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKP-LEVPIFALVGARRLVGGSNVGG----MK----ETQEMLDF 315 (359)
Q Consensus 246 -~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~~~----~~----~~~~~~~~ 315 (359)
.|+|+++|.+|... +...+.+|++.|.+|.+|..++. -+++...+--|++++..-++.. .. ...+++.+
T Consensus 213 gKGVd~vyDsvG~dt-~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~al 291 (336)
T KOG1197|consen 213 GKGVDAVYDSVGKDT-FAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFAL 291 (336)
T ss_pred CCCceeeeccccchh-hHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHH
Confidence 28999999999977 99999999999999999987753 3455555555666665433221 12 25677888
Q ss_pred HHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEEcCCCcC
Q 018246 316 CAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVIDVGNSKL 358 (359)
Q Consensus 316 l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~~~~ 358 (359)
+.+|.+++.+ ++|||+++.+|+..+.++...||+++...++..
T Consensus 292 vnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~~~ 335 (336)
T KOG1197|consen 292 VNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPEKE 335 (336)
T ss_pred hhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEeCCcccc
Confidence 8999999999 899999999999999999999999999998854
No 27
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=8.5e-47 Score=350.75 Aligned_cols=328 Identities=23% Similarity=0.363 Sum_probs=269.7
Q ss_pred cceeeeeecCCCCCccceeeecCCC-CCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRET-GADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
||++.+.. ++.+++.+.+.|.| +++||+|||.++++|++|++.+.+... ..+|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~~---~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 76 (347)
T PRK10309 1 MKSVVNDT---DGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-HYYPITLGHEFSGYVEAVGSGVDDLH 76 (347)
T ss_pred CceEEEeC---CCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-CCCCcccccceEEEEEEeCCCCCCCC
Confidence 56666653 34688999999998 599999999999999999875422111 23578999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhh
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGI 169 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ 169 (359)
+||||++.+.. .|+.|.+|..|.++.|.++.+. |...+|+|++|+.+|++.++++|+++++++++.+. +..
T Consensus 77 vGd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~ 147 (347)
T PRK10309 77 PGDAVACVPLL-PCFTCPECLRGFYSLCAKYDFI-------GSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PIT 147 (347)
T ss_pred CCCEEEECCCc-CCCCCcchhCcCcccCCCccee-------ccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHH
Confidence 99999887666 7999999999999999875432 23457999999999999999999999999988763 345
Q ss_pred hhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCH--HHHHHhcC
Q 018246 170 TVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISTSPKKESEAISKLGADAFLVSSDP--AKVKAAMG 246 (359)
Q Consensus 170 ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~-V~~v~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~~ 246 (359)
++|+++.. ..+++|++|||+|+|++|++++|+|+.+|++ |+++++++++.+.+ +++|+++++++++. +.+.+.+.
T Consensus 148 ~~~~~~~~-~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~Ga~~~i~~~~~~~~~~~~~~~ 225 (347)
T PRK10309 148 VGLHAFHL-AQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALA-KSLGAMQTFNSREMSAPQIQSVLR 225 (347)
T ss_pred HHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCceEecCcccCHHHHHHHhc
Confidence 57777644 4558999999999999999999999999995 78899999998887 89999999887643 23344432
Q ss_pred --Ccc-EEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeC---HHHHHhcCcEEEEeecCC-----HHHHHHHHHH
Q 018246 247 --TMD-YIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVP---IFALVGARRLVGGSNVGG-----MKETQEMLDF 315 (359)
Q Consensus 247 --~~d-~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~~k~~~i~g~~~~~-----~~~~~~~~~~ 315 (359)
++| ++|||+|+..++..++++++++|+++.+|...+..+++ +..++.|++++.|+..+. ..++++++++
T Consensus 226 ~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 305 (347)
T PRK10309 226 ELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRL 305 (347)
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHH
Confidence 688 99999998877899999999999999999765443333 235678999999987642 3678999999
Q ss_pred HHhCCCc--ccE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 316 CAKHNIA--ADI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 316 l~~g~i~--~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
+++|+++ +.+ ++|+|+++++||+.+.+++..||+|+++
T Consensus 306 ~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 306 LTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred HHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 9999984 444 8899999999999999888889999976
No 28
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=7.9e-46 Score=342.90 Aligned_cols=333 Identities=59% Similarity=1.013 Sum_probs=294.0
Q ss_pred ecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEe
Q 018246 18 ARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVG 97 (359)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~ 97 (359)
.+....++++.+++.|+++++||+||+.++++|++|++.+.|......+|.++|||++|+|+++|++++.|++||+|++.
T Consensus 5 ~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 84 (337)
T cd05283 5 ARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVG 84 (337)
T ss_pred EecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCEEEEe
Confidence 33566889999999999999999999999999999999998876555668899999999999999999999999999877
Q ss_pred ccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhhhhHhHh
Q 018246 98 VLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKY 177 (359)
Q Consensus 98 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~ 177 (359)
+..+.|++|.+|..+..++|....+.+.+...++...+|+|++|+.++.+.++++|+++++++++.+.+.+.|||+++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~ 164 (337)
T cd05283 85 CQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKR 164 (337)
T ss_pred cCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHHh
Confidence 77779999999999999999887655444444444567999999999999999999999999999999999999999988
Q ss_pred cCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCC
Q 018246 178 YGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSA 257 (359)
Q Consensus 178 ~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~ 257 (359)
.. +++|++|+|.|+|++|++++++|++.|++|+++++++++.+.+ +++|++.+++.+..+.......++|+++||++.
T Consensus 165 ~~-~~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~d~v~~~~g~ 242 (337)
T cd05283 165 NG-VGPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDA-LKLGADEFIATKDPEAMKKAAGSLDLIIDTVSA 242 (337)
T ss_pred cC-CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHcCCcEEecCcchhhhhhccCCceEEEECCCC
Confidence 76 5899999999899999999999999999999999999998888 789999998877654444444689999999998
Q ss_pred hhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcccEEEEccccHHHHH
Q 018246 258 VHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADIELVRMDQINTAM 337 (359)
Q Consensus 258 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~~~~~~l~~~~~a~ 337 (359)
...+..++++++++|+++.+|.......++...++.+++++.++.....++++.++++++++++++.++.++++++++||
T Consensus 243 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~ 322 (337)
T cd05283 243 SHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIKPWVEVIPMDGINEAL 322 (337)
T ss_pred cchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCccceEEEEHHHHHHHH
Confidence 75588999999999999999876554466777777899999999988889999999999999998877899999999999
Q ss_pred HHHHcCCccEEEEEE
Q 018246 338 ERLAKSDVKYRFVID 352 (359)
Q Consensus 338 ~~~~~~~~~gkvvv~ 352 (359)
+.+.+++..||+|++
T Consensus 323 ~~~~~~~~~~k~v~~ 337 (337)
T cd05283 323 ERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHcCCCcceEeeC
Confidence 999999988999874
No 29
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=8.4e-47 Score=349.38 Aligned_cols=311 Identities=16% Similarity=0.197 Sum_probs=247.8
Q ss_pred CCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCC----CCCCCcccccccEEEEEeCCCCCCCCCCCEEEE
Q 018246 21 NTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGV----TNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGV 96 (359)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~----~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v 96 (359)
.++++++.+.+.|. +++||+|||+++|||++|++.+.|.+.. ..+|.++|||++|+|+++|.. .|++||||++
T Consensus 10 ~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~vGdrV~~ 86 (341)
T cd08237 10 RPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYKVGTKVVM 86 (341)
T ss_pred ccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--ccCCCCEEEE
Confidence 56679999999995 9999999999999999999999987532 357899999999999998864 6999999988
Q ss_pred eccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhhhhHhH
Q 018246 97 GVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMK 176 (359)
Q Consensus 97 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~ 176 (359)
.+.. .|. |..| +..+.|.+..+. |...+|+|+||+++|+++++++|+++++++|+ +..+..++|+++.
T Consensus 87 ~~~~-~~~-~~~~--~~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~~~~a~~a~~ 154 (341)
T cd08237 87 VPNT-PVE-KDEI--IPENYLPSSRFR-------SSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTELVSVGVHAIS 154 (341)
T ss_pred CCCC-Cch-hccc--chhccCCCccee-------EecCCCceEEEEEEchHHeEECCCCCChHHhh-hhchHHHHHHHHH
Confidence 7665 365 5455 356778765432 22346999999999999999999999998876 4457788888886
Q ss_pred hc--CCCCCCCEEEEECCchHHHHHHHHHHH-CCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEE
Q 018246 177 YY--GMTEPGKHLGVAGLGGLGHVAVKIGKA-FGL-KVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYII 252 (359)
Q Consensus 177 ~~--~~~~~g~~VlI~G~g~vG~~a~~la~~-~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vi 252 (359)
.. ..+++|++|||.|+|++|++++|+|++ .|+ +|++++++++|++.+ ++.+.+..++ +.... .++|+||
T Consensus 155 ~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a-~~~~~~~~~~----~~~~~--~g~d~vi 227 (341)
T cd08237 155 RFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLF-SFADETYLID----DIPED--LAVDHAF 227 (341)
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHH-hhcCceeehh----hhhhc--cCCcEEE
Confidence 53 234789999999999999999999986 564 899999999998888 5666554332 11111 2699999
Q ss_pred ECCCC---hhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhC-----CCccc
Q 018246 253 DTVSA---VHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKH-----NIAAD 324 (359)
Q Consensus 253 d~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g-----~i~~~ 324 (359)
|++|+ +.++..++++++++|+++.+|......+++...++.|++++.|+..+...++++++++++++ .+++.
T Consensus 228 D~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 307 (341)
T cd08237 228 ECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNPEVAEYLRKL 307 (341)
T ss_pred ECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCCcccCChHHH
Confidence 99994 45689999999999999999976555677788888999999999887788899999999998 45565
Q ss_pred E-EEEccc---cHHHHHHHHHcCCccEEEEEEcC
Q 018246 325 I-ELVRMD---QINTAMERLAKSDVKYRFVIDVG 354 (359)
Q Consensus 325 ~-~~~~l~---~~~~a~~~~~~~~~~gkvvv~~~ 354 (359)
+ ++|+|+ ++.++|+.+.++ ..||+||.++
T Consensus 308 i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 308 VGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred hccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 5 789986 455555555444 5799999864
No 30
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=1.8e-45 Score=343.64 Aligned_cols=337 Identities=26% Similarity=0.365 Sum_probs=281.1
Q ss_pred ceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCC----
Q 018246 12 KAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSK---- 87 (359)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~---- 87 (359)
|++++.. ..+.+++++++.|.|+++||+|||.++++|++|++...|.++...+|.++|||++|+|+++|++++.
T Consensus 2 ka~~~~~--~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~ 79 (361)
T cd08231 2 RAAVLTG--PGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAG 79 (361)
T ss_pred eEEEEcC--CCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccC
Confidence 3444443 3347999999999999999999999999999999999887653456889999999999999999986
Q ss_pred --CCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCC-ceEECCCCCCccccccc
Q 018246 88 --FKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQH-YVLRFPDNMPLDAGAPL 164 (359)
Q Consensus 88 --~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~-~~~~lp~~l~~~~aa~l 164 (359)
|++||+|++.+.. +|+.|.+|+.+.++.|.+..+...+....+....|+|++|++++++ .++++|++++.++++.+
T Consensus 80 ~~~~~Gd~V~~~~~~-~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~ 158 (361)
T cd08231 80 EPLKVGDRVTWSVGA-PCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPA 158 (361)
T ss_pred CccCCCCEEEEcccC-CCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHh
Confidence 9999999776554 8999999999999999987544222111112246999999999986 79999999999999999
Q ss_pred cchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHH----
Q 018246 165 LCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDPA---- 239 (359)
Q Consensus 165 ~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~---- 239 (359)
++++.|||+++.....+++|++|||+|+|.+|++++++|++.|+ +|+++++++++.+.+ +++|++.++++++.+
T Consensus 159 ~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~ 237 (361)
T cd08231 159 NCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-REFGADATIDIDELPDPQR 237 (361)
T ss_pred cCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCCeEEcCcccccHHH
Confidence 89999999999988887799999999999999999999999999 999999999998877 889999988776431
Q ss_pred --HHHHhcC--CccEEEECCCChhhHHHHHhccccCCEEEEecCCCC--CeeeCHHHHHhcCcEEEEeecCCHHHHHHHH
Q 018246 240 --KVKAAMG--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK--PLEVPIFALVGARRLVGGSNVGGMKETQEML 313 (359)
Q Consensus 240 --~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~ 313 (359)
.+.+++. ++|++||++|+...+..++++++++|+++.+|.... ...++...++.+++++.++..++.+++++++
T Consensus 238 ~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (361)
T cd08231 238 RAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAV 317 (361)
T ss_pred HHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHHHH
Confidence 2444443 799999999986668899999999999999987542 3456666678899999999888888899999
Q ss_pred HHHHhC--CC--cccE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 314 DFCAKH--NI--AADI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 314 ~~l~~g--~i--~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
+++.++ .+ .+.+ ++|+++++++||+.+.++. .+|+||.+
T Consensus 318 ~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~~k~vi~~ 361 (361)
T cd08231 318 RFLERTQDRFPFAELVTHRYPLEDINEALELAESGT-ALKVVIDP 361 (361)
T ss_pred HHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCC-ceEEEeCC
Confidence 999888 43 3343 7899999999999998876 48999863
No 31
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=3.4e-45 Score=340.60 Aligned_cols=327 Identities=27% Similarity=0.423 Sum_probs=277.2
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCC---C--------CCCCCCcccccccEEEE
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEW---G--------VTNYPIVPGHEIVGTVT 79 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~---~--------~~~~p~~~G~e~~G~V~ 79 (359)
||++++. +++.+++.+++.|+|+++||+||+.++++|++|++.+.+.. + ...+|.++|||++|+|+
T Consensus 1 mka~~~~---~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~ 77 (351)
T cd08233 1 MKAARYH---GRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVV 77 (351)
T ss_pred CceEEEe---cCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEE
Confidence 5677765 35568999999999999999999999999999998765321 1 12367899999999999
Q ss_pred EeCCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCC-CCCccceEEEeeCCceEECCCCCCc
Q 018246 80 KVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTK-TYGGYSDLIVVDQHYVLRFPDNMPL 158 (359)
Q Consensus 80 ~vG~~v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~g~~a~~~~~~~~~~~~lp~~l~~ 158 (359)
++|++++.|++||+|+..+.. .|+.|.+|.+|.++.|.+..+. |.. .+|+|++|++++.+.++++|+++++
T Consensus 78 ~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~a~~~~~~~~~~~~lP~~~~~ 149 (351)
T cd08233 78 EVGSGVTGFKVGDRVVVEPTI-KCGTCGACKRGLYNLCDSLGFI-------GLGGGGGGFAEYVVVPAYHVHKLPDNVPL 149 (351)
T ss_pred EeCCCCCCCCCCCEEEECCCC-CCCCChHHhCcCcccCCCCcee-------ccCCCCCceeeEEEechHHeEECcCCCCH
Confidence 999999999999999876554 8999999999999999876421 111 2599999999999999999999999
Q ss_pred cccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCC
Q 018246 159 DAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSD 237 (359)
Q Consensus 159 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~ 237 (359)
++++.+ .++.|||+++ ....+++|++|||+|+|.+|++++|+|+..|+ +|+++++++++.+.+ +++|++.++++++
T Consensus 150 ~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~ga~~~i~~~~ 226 (351)
T cd08233 150 EEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELA-EELGATIVLDPTE 226 (351)
T ss_pred HHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCEEECCCc
Confidence 988765 6778999998 55566899999999999999999999999999 899999999998887 7899999998876
Q ss_pred HHH---HHHhcC--CccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHH
Q 018246 238 PAK---VKAAMG--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEM 312 (359)
Q Consensus 238 ~~~---~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~ 312 (359)
.+. +.+... ++|+++|++|+...+..++++++++|+++.+|......+++...++.+++++.++..+...+++++
T Consensus 227 ~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 306 (351)
T cd08233 227 VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEV 306 (351)
T ss_pred cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHH
Confidence 433 333443 599999999976668999999999999999998766667788888899999999887777889999
Q ss_pred HHHHHhCCCcc--cE-EEEccccH-HHHHHHHHcCCcc-EEEEE
Q 018246 313 LDFCAKHNIAA--DI-ELVRMDQI-NTAMERLAKSDVK-YRFVI 351 (359)
Q Consensus 313 ~~~l~~g~i~~--~~-~~~~l~~~-~~a~~~~~~~~~~-gkvvv 351 (359)
+++++++++++ .+ ++|+++|+ ++||+.+.+++.. ||+||
T Consensus 307 ~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 307 IDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred HHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 99999999953 34 79999996 7999999998875 99987
No 32
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1.9e-44 Score=329.11 Aligned_cols=299 Identities=18% Similarity=0.208 Sum_probs=242.1
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecc-hhhhhhhccCCCC---CCCCCcccccccEEEEEeCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGIC-HSDLHCARNEWGV---TNYPIVPGHEIVGTVTKVGNNVS 86 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~-~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~ 86 (359)
++++++. .++.+++.+.+.|+|+++||+|||.+++|| ++|++.+.|.++. ..+|.++|||++|+|+++|+++
T Consensus 2 ~ka~~~~---~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v- 77 (308)
T TIGR01202 2 TQAIVLS---GPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT- 77 (308)
T ss_pred ceEEEEe---CCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-
Confidence 4556554 456799999999999999999999999996 7999988887643 3579999999999999999998
Q ss_pred CCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccc
Q 018246 87 KFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLC 166 (359)
Q Consensus 87 ~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~ 166 (359)
.|++||||++.+ ..|..|.. ...|+|+||+++|++.++++|++++++. +.+ .
T Consensus 78 ~~~vGdrV~~~~-----~~c~~~~~---------------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~ 129 (308)
T TIGR01202 78 GFRPGDRVFVPG-----SNCYEDVR---------------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALL-A 129 (308)
T ss_pred CCCCCCEEEEeC-----cccccccc---------------------ccCCcccceEEcCHHHceeCCCCCCHHH-Hhh-h
Confidence 599999997532 22322211 1249999999999999999999999864 444 3
Q ss_pred hhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhc
Q 018246 167 AGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAM 245 (359)
Q Consensus 167 ~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~-V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 245 (359)
...|||+++... . .++++|||+|+|++|++++|+|+++|++ |++++.+++|++.+ .. .+++|+.+. ..
T Consensus 130 ~~~~a~~~~~~~-~-~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a-~~---~~~i~~~~~-----~~ 198 (308)
T TIGR01202 130 LAATARHAVAGA-E-VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGA-TG---YEVLDPEKD-----PR 198 (308)
T ss_pred HHHHHHHHHHhc-c-cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhh-hh---ccccChhhc-----cC
Confidence 468999999764 3 4688999999999999999999999996 66677777776655 33 344554321 23
Q ss_pred CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcc--
Q 018246 246 GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAA-- 323 (359)
Q Consensus 246 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~-- 323 (359)
.++|+||||+|+..+++.++++++++|+++.+|......++++..++.|++++.++..+..+++++++++++++++++
T Consensus 199 ~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~ 278 (308)
T TIGR01202 199 RDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDG 278 (308)
T ss_pred CCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhh
Confidence 479999999999876899999999999999999876556677777888999999988877888999999999999975
Q ss_pred cE-EEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 324 DI-ELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 324 ~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
.+ ++|||+++++||+.+.++...+|++++
T Consensus 279 ~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 279 LITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred ccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 23 899999999999998877667999874
No 33
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=2.3e-43 Score=326.81 Aligned_cols=330 Identities=21% Similarity=0.320 Sum_probs=271.6
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
||++++. +++.+++.+++.|.|+++||+||+.++++|++|++.+.|.++...+|.++|||++|+|+++|++++.+++
T Consensus 1 m~a~~~~---~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 77 (339)
T PRK10083 1 MKSIVIE---KPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARI 77 (339)
T ss_pred CeEEEEe---cCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCC
Confidence 4666554 3557889999999999999999999999999999998887654456889999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGIT 170 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~t 170 (359)
||+|++.+.. .|+.|.+|..+.+++|.++... +...+|+|++|+.++.+.++++|+++++++++ +...+.+
T Consensus 78 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~ 148 (339)
T PRK10083 78 GERVAVDPVI-SCGHCYPCSIGKPNVCTSLVVL-------GVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTI 148 (339)
T ss_pred CCEEEEcccc-CCCCCccccCcCcccCCCCceE-------EEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHH
Confidence 9999887766 6999999999999999866432 22346999999999999999999999998875 5566777
Q ss_pred hhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHH-CCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhc-C-
Q 018246 171 VYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKA-FGL-KVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAM-G- 246 (359)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~-~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-~- 246 (359)
++.++ ....+++|++|+|+|+|++|++++|+|+. +|+ .|+++++++++.+.+ +++|+++++++++.+....+. .
T Consensus 149 a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~-~~~Ga~~~i~~~~~~~~~~~~~~g 226 (339)
T PRK10083 149 AANVT-GRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALA-KESGADWVINNAQEPLGEALEEKG 226 (339)
T ss_pred HHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHH-HHhCCcEEecCccccHHHHHhcCC
Confidence 77544 44566999999999999999999999997 699 577788888888777 889999999877543333332 1
Q ss_pred -CccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcc--
Q 018246 247 -TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAA-- 323 (359)
Q Consensus 247 -~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~-- 323 (359)
++|++||++|+...+..++++++++|+++.+|.......++...+..+++++.+... ...++++++++++++++++
T Consensus 227 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~~~~ 305 (339)
T PRK10083 227 IKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRL-NANKFPVVIDWLSKGLIDPEK 305 (339)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEec-ChhhHHHHHHHHHcCCCChHH
Confidence 467999999976668999999999999999987654444455555678888887754 4577999999999999986
Q ss_pred -cEEEEccccHHHHHHHHHcCC-ccEEEEEEcCC
Q 018246 324 -DIELVRMDQINTAMERLAKSD-VKYRFVIDVGN 355 (359)
Q Consensus 324 -~~~~~~l~~~~~a~~~~~~~~-~~gkvvv~~~~ 355 (359)
..+.|+++++++|++.+.++. ..+|+++.+.+
T Consensus 306 ~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 306 LITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred heeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 348999999999999988653 56999998764
No 34
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=5e-43 Score=324.38 Aligned_cols=331 Identities=27% Similarity=0.496 Sum_probs=281.2
Q ss_pred cceeeeeecCCCCCcc-ceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFS-PFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
||++.+.. ++... +++++.|.+.++||+|||.++++|++|++.+.|..+. ..|.++|||++|+|+++|++++.|+
T Consensus 1 mka~~~~~---~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~ 76 (338)
T PRK09422 1 MKAAVVNK---DHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLK 76 (338)
T ss_pred CeEEEecC---CCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCC
Confidence 56666653 23344 7889999999999999999999999999988876542 2367899999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhh
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGI 169 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ 169 (359)
+||+|++.+....|++|.+|..+..++|.+..+. |...+|+|++|+.++.+.++++|+++++++++++++.+.
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ 149 (338)
T PRK09422 77 VGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNA-------GYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGV 149 (338)
T ss_pred CCCEEEEccCCCCCCCChhhcCCCcccCCCcccc-------CccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchh
Confidence 9999988888889999999999999999876431 334569999999999999999999999999999999999
Q ss_pred hhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHH-CCCeEEEEeCChhhHHHHHHHcCCcEEecCCC-H---HHHHHh
Q 018246 170 TVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKA-FGLKVTVISTSPKKESEAISKLGADAFLVSSD-P---AKVKAA 244 (359)
Q Consensus 170 ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~-~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~-~---~~~~~~ 244 (359)
|||+++ ....+++|++|||+|+|++|++++++|++ .|++|+++++++++.+.+ +++|++.+++++. . ..+.+.
T Consensus 150 ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~v~~~ 227 (338)
T PRK09422 150 TTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALA-KEVGADLTINSKRVEDVAKIIQEK 227 (338)
T ss_pred HHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHH-HHcCCcEEecccccccHHHHHHHh
Confidence 999998 45556999999999999999999999998 499999999999999988 8999999988754 2 334445
Q ss_pred cCCccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCccc
Q 018246 245 MGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAAD 324 (359)
Q Consensus 245 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~ 324 (359)
.+++|+++.+.++...+..++++++++|+++.+|.......++...+..++.++.++.....++++.+++++.++++.+.
T Consensus 228 ~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~ 307 (338)
T PRK09422 228 TGGAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPK 307 (338)
T ss_pred cCCCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCcc
Confidence 56789555555555558999999999999999987655556677777778899988776677889999999999999877
Q ss_pred EEEEccccHHHHHHHHHcCCccEEEEEEcC
Q 018246 325 IELVRMDQINTAMERLAKSDVKYRFVIDVG 354 (359)
Q Consensus 325 ~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 354 (359)
++.++++++++||+.+.++...||+++.+.
T Consensus 308 v~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 308 VQLRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred EEEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 777899999999999999888899998753
No 35
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=2.6e-43 Score=326.50 Aligned_cols=331 Identities=32% Similarity=0.483 Sum_probs=284.1
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG---VTNYPIVPGHEIVGTVTKVGNNVSK 87 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 87 (359)
||++++..++ ..+++.+.+.|++.+++|+|++.++++|++|+....|.++ ...+|.++|+|++|+|+++|++++.
T Consensus 1 ~ka~~~~~~~--~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~ 78 (340)
T cd05284 1 MKAARLYEYG--KPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDG 78 (340)
T ss_pred CeeeEeccCC--CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCc
Confidence 4666666432 4588888888999999999999999999999999887654 3455789999999999999999999
Q ss_pred CCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccch
Q 018246 88 FKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCA 167 (359)
Q Consensus 88 ~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~ 167 (359)
+++||+|+..+.. .|+.|..|..|..++|.+..+. |...+|+|++|++++.++++++|+++++++++.+++.
T Consensus 79 ~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~ 150 (340)
T cd05284 79 LKEGDPVVVHPPW-GCGTCRYCRRGEENYCENARFP-------GIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADA 150 (340)
T ss_pred CcCCCEEEEcCCC-CCCCChHHhCcCcccCCCCccc-------CccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcch
Confidence 9999999877665 8999999999999999988654 3345699999999999999999999999999999999
Q ss_pred hhhhhhHhHhc-CCCCCCCEEEEECCchHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcEEecCCCH--HHHHH
Q 018246 168 GITVYSPMKYY-GMTEPGKHLGVAGLGGLGHVAVKIGKAFG-LKVTVISTSPKKESEAISKLGADAFLVSSDP--AKVKA 243 (359)
Q Consensus 168 ~~ta~~~l~~~-~~~~~g~~VlI~G~g~vG~~a~~la~~~g-~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~ 243 (359)
+.|||+++... ..+.++++|||+|+|.+|++++++|+..| ++|+++.+++++.+.+ +++|+++++++++. +.+.+
T Consensus 151 ~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~ 229 (340)
T cd05284 151 GLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLA-ERLGADHVLNASDDVVEEVRE 229 (340)
T ss_pred HHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHH-HHhCCcEEEcCCccHHHHHHH
Confidence 99999999876 55688999999999889999999999999 7999999999998888 89999999987764 23333
Q ss_pred hcC--CccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCC
Q 018246 244 AMG--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNI 321 (359)
Q Consensus 244 ~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i 321 (359)
+.. ++|+++|++|+...+..++++|+++|+++.+|.... ..++....+.+++++.++......++++++++++++.+
T Consensus 230 ~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l 308 (340)
T cd05284 230 LTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKV 308 (340)
T ss_pred HhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCC
Confidence 333 699999999986658999999999999999986543 44455555678999999887777889999999999999
Q ss_pred cccEEEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 322 AADIELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 322 ~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
++.++.|+++++++|++.+.+++..||+++.+
T Consensus 309 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 309 KVEITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred CcceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 88778899999999999999988889999753
No 36
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1e-42 Score=328.59 Aligned_cols=338 Identities=17% Similarity=0.237 Sum_probs=280.8
Q ss_pred CCcccceeeeeec--CCC-CCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC----------CCCCCCccccc
Q 018246 7 TEHPQKAIGWAAR--DNT-GTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG----------VTNYPIVPGHE 73 (359)
Q Consensus 7 ~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~----------~~~~p~~~G~e 73 (359)
.|.+|+++++... +.+ ..+++.+++.|.++++||+|++.++++|++|++...|... ....+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 4667888887532 223 2478889999999999999999999999999988766411 11123588999
Q ss_pred ccEEEEEeCCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECC
Q 018246 74 IVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFP 153 (359)
Q Consensus 74 ~~G~V~~vG~~v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp 153 (359)
++|+|+++|++++.+++||+|++.+.. .|+.|..|..+.+++|.+..+. +. ...+|+|++|+++|...++++|
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~c~~~~~~~~~~~~~~--g~----~~~~g~~a~y~~v~~~~l~~iP 161 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSV-WDGNDPERAGGDPMFDPSQRIW--GY----ETNYGSFAQFALVQATQLMPKP 161 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccc-cccCcccccccccccccccccc--cc----cCCCCcceeEEEechHHeEECC
Confidence 999999999999999999999877654 7889999999999999875332 11 1246999999999999999999
Q ss_pred CCCCccccccccchhhhhhhHhHhc--CCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc
Q 018246 154 DNMPLDAGAPLLCAGITVYSPMKYY--GMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD 230 (359)
Q Consensus 154 ~~l~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~ 230 (359)
+++++++++.+++++.|||+++... ..+++|++|+|+|+ |++|++++++|++.|++++++++++++.+.+ +++|++
T Consensus 162 ~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~-~~~G~~ 240 (393)
T cd08246 162 KHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC-RALGAE 240 (393)
T ss_pred CCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCCC
Confidence 9999999999999999999998765 56789999999996 9999999999999999999999999999888 789999
Q ss_pred EEecCCCH-------------------------HHHHHhcC---CccEEEECCCChhhHHHHHhccccCCEEEEecCCCC
Q 018246 231 AFLVSSDP-------------------------AKVKAAMG---TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK 282 (359)
Q Consensus 231 ~v~~~~~~-------------------------~~~~~~~~---~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 282 (359)
+++++++. ..+.++++ ++|+++|++|+.. +..++++++++|+++.+|....
T Consensus 241 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~ 319 (393)
T cd08246 241 GVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT-FPTSVFVCDRGGMVVICAGTTG 319 (393)
T ss_pred EEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh-HHHHHHHhccCCEEEEEcccCC
Confidence 98886331 12333333 6999999999855 8899999999999999986543
Q ss_pred -CeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcccE-EEEccccHHHHHHHHHcC-CccEEEEEEc
Q 018246 283 -PLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADI-ELVRMDQINTAMERLAKS-DVKYRFVIDV 353 (359)
Q Consensus 283 -~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~-~~~gkvvv~~ 353 (359)
...++...++.++.++.++.....+++.+++++++++.+.+.+ ++|+++++++||+.+.++ +..||+++.+
T Consensus 320 ~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~~ 393 (393)
T cd08246 320 YNHTYDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVLV 393 (393)
T ss_pred CCCCCcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEeC
Confidence 3456667777889999998888888899999999999998655 899999999999999988 6789998753
No 37
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=5.5e-43 Score=331.51 Aligned_cols=320 Identities=18% Similarity=0.257 Sum_probs=253.4
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhh-ccCCCC------CCCCCcccccccEEEEEeCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCA-RNEWGV------TNYPIVPGHEIVGTVTKVGN 83 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~-~g~~~~------~~~p~~~G~e~~G~V~~vG~ 83 (359)
|+++.+. .++.+++.+++.|.++++||+|||.++|+|++|++.+ .|.... ..+|.++|||++|+|+++|+
T Consensus 3 ~~a~~~~---~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 3 TKAWRMY---GKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred cEEEEEE---cCCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 4444443 3446999999999999999999999999999999976 453211 23678999999999999999
Q ss_pred CCC-CCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCC----ceEECCCCCCc
Q 018246 84 NVS-KFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQH----YVLRFPDNMPL 158 (359)
Q Consensus 84 ~v~-~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~----~~~~lp~~l~~ 158 (359)
+|+ +|++||||++.+.. .|+.|..|. .+ |...+|+|+||+++|++ .++++|+++++
T Consensus 80 ~v~~~~~vGdrV~~~~~~-~c~~~~~c~--------~~----------g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~ 140 (410)
T cd08238 80 KWQGKYKPGQRFVIQPAL-ILPDGPSCP--------GY----------SYTYPGGLATYHIIPNEVMEQDCLLIYEGDGY 140 (410)
T ss_pred CccCCCCCCCEEEEcCCc-CCCCCCCCC--------Cc----------cccCCCcceEEEEecHHhccCCeEECCCCCCH
Confidence 998 69999999877654 688777662 11 12246999999999987 68999999999
Q ss_pred cccccc-c--chhhhhhhHh--------HhcCCCCCCCEEEEEC-CchHHHHHHHHHHHCCC---eEEEEeCChhhHHHH
Q 018246 159 DAGAPL-L--CAGITVYSPM--------KYYGMTEPGKHLGVAG-LGGLGHVAVKIGKAFGL---KVTVISTSPKKESEA 223 (359)
Q Consensus 159 ~~aa~l-~--~~~~ta~~~l--------~~~~~~~~g~~VlI~G-~g~vG~~a~~la~~~g~---~V~~v~~~~~~~~~~ 223 (359)
++++.+ + +. .+++.++ .....+++|++|+|+| +|++|++++|+|++.|+ +|++++++++|++.+
T Consensus 141 ~~aal~epl~~~-~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a 219 (410)
T cd08238 141 AEASLVEPLSCV-IGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA 219 (410)
T ss_pred HHHhhcchHHHH-HHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence 988744 2 22 2234332 2345668999999997 59999999999999854 899999999999988
Q ss_pred HHHc--------CCc-EEecCCC-H---HHHHHhcC--CccEEEECCCChhhHHHHHhccccCCEEEEecCC-CC--Cee
Q 018246 224 ISKL--------GAD-AFLVSSD-P---AKVKAAMG--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLP-EK--PLE 285 (359)
Q Consensus 224 ~~~~--------g~~-~v~~~~~-~---~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~--~~~ 285 (359)
+++ |++ .++++++ . ..+.++++ ++|+++|++|...++..++++++++|+++.++.. .. ..+
T Consensus 220 -~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~ 298 (410)
T cd08238 220 -QRLFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAP 298 (410)
T ss_pred -HHhccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCcccc
Confidence 665 665 5677643 2 23444443 7999999999877799999999999988876542 22 346
Q ss_pred eCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcc--cE-EEEccccHHHHHHHHHcCCccEEEEEEcCC
Q 018246 286 VPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAA--DI-ELVRMDQINTAMERLAKSDVKYRFVIDVGN 355 (359)
Q Consensus 286 ~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 355 (359)
++...++.+++++.|+......+++++++++++|++++ .+ ++|||+++++||+.+. ++..||+|+.++.
T Consensus 299 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~~ 370 (410)
T cd08238 299 LNFYNVHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQK 370 (410)
T ss_pred ccHHHhhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECCC
Confidence 77788889999999998888889999999999999986 34 8999999999999999 6677999998854
No 38
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.2e-42 Score=323.46 Aligned_cols=333 Identities=18% Similarity=0.241 Sum_probs=271.3
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
|+++++..+ +.+++.+.+.|.+.++||+|||.++++|++|++...|.+.....|.++|||++|+|+++|++++.+++
T Consensus 1 mka~~~~~~---~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~ 77 (351)
T cd08285 1 MKAFAMLGI---GKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKP 77 (351)
T ss_pred CceEEEccC---CccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCC
Confidence 567776643 34788888888999999999999999999999988876554566889999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCC--ceEECCCCCCccccccccchh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQH--YVLRFPDNMPLDAGAPLLCAG 168 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~--~~~~lp~~l~~~~aa~l~~~~ 168 (359)
||+|++.+.. .|+.|..|..|.++.|.+.... .. .+...+|+|++|+++|.+ .++++|+++++++++.++..+
T Consensus 78 Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~~---~~-~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~ 152 (351)
T cd08285 78 GDRVIVPAIT-PDWRSVAAQRGYPSQSGGMLGG---WK-FSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMM 152 (351)
T ss_pred CCEEEEcCcC-CCCCCHHHHCcCcccCcCCCCC---cc-ccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccch
Confidence 9999876654 8999999999999999875311 11 122356999999999974 899999999999999999999
Q ss_pred hhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHh
Q 018246 169 ITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDPA---KVKAA 244 (359)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~ 244 (359)
.|||+++.. ..+++|++|||+|+|++|++++|+|++.|+ .|+++++++++.+.+ +++|+++++++++.+ .+..+
T Consensus 153 ~ta~~~~~~-~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~i~~~ 230 (351)
T cd08285 153 STGFHGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELA-KEYGATDIVDYKNGDVVEQILKL 230 (351)
T ss_pred hhHHHHHHc-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCceEecCCCCCHHHHHHHH
Confidence 999999744 456999999999999999999999999999 688899998888777 889999999876543 23333
Q ss_pred c--CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCCC--eeeCH--HHHHhcCcEEEEeecC-CHHHHHHHHHHHH
Q 018246 245 M--GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKP--LEVPI--FALVGARRLVGGSNVG-GMKETQEMLDFCA 317 (359)
Q Consensus 245 ~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~--~~~~~k~~~i~g~~~~-~~~~~~~~~~~l~ 317 (359)
. .++|+++|++|+...+..++++++++|+++.+|..... ..++. +....+..++.+.... ..++++++++++.
T Consensus 231 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 310 (351)
T cd08285 231 TGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIE 310 (351)
T ss_pred hCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHH
Confidence 3 37999999999876689999999999999999876532 23332 2223456667665432 3567999999999
Q ss_pred hCCCcc---cE-EEEccccHHHHHHHHHcCC-ccEEEEEEc
Q 018246 318 KHNIAA---DI-ELVRMDQINTAMERLAKSD-VKYRFVIDV 353 (359)
Q Consensus 318 ~g~i~~---~~-~~~~l~~~~~a~~~~~~~~-~~gkvvv~~ 353 (359)
+|++++ .+ +.++++++++||+.+.+++ ..+|++|++
T Consensus 311 ~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 311 YGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred cCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 999987 34 4689999999999999876 468999864
No 39
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=2.8e-42 Score=320.84 Aligned_cols=331 Identities=29% Similarity=0.451 Sum_probs=281.1
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC------------CCCCCCcccccccEEE
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG------------VTNYPIVPGHEIVGTV 78 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~------------~~~~p~~~G~e~~G~V 78 (359)
||++.+.. ....+++.+++.|+++++||+||+.++++|++|++.+.|.++ ...+|.++|+|++|+|
T Consensus 1 ~~a~~~~~--~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V 78 (350)
T cd08240 1 MKAAAVVE--PGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEV 78 (350)
T ss_pred CeeEEecc--CCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEE
Confidence 56666654 334488889999999999999999999999999999887643 1234678999999999
Q ss_pred EEeCCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCc
Q 018246 79 TKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPL 158 (359)
Q Consensus 79 ~~vG~~v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~ 158 (359)
+++|++++.+++||+|+..+.. .|+.|..|.++..++|....+. |....|++++|+.++.+.++++|+++++
T Consensus 79 ~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~~p~~~s~ 150 (350)
T cd08240 79 VAVGPDAADVKVGDKVLVYPWI-GCGECPVCLAGDENLCAKGRAL-------GIFQDGGYAEYVIVPHSRYLVDPGGLDP 150 (350)
T ss_pred EeeCCCCCCCCCCCEEEECCcC-CCCCChHHHCcCcccCCCCCce-------eeeccCcceeeEEecHHHeeeCCCCCCH
Confidence 9999999999999999887766 8999999999999999775322 1224589999999999999999999999
Q ss_pred cccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCC
Q 018246 159 DAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSD 237 (359)
Q Consensus 159 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~ 237 (359)
++++.+.+.+.|||++++....++++++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+ +++|++.+++.++
T Consensus 151 ~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~ 229 (350)
T cd08240 151 ALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAA-KAAGADVVVNGSD 229 (350)
T ss_pred HHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCcEEecCCC
Confidence 99999999999999999988877789999999999999999999999999 799999999998888 8899988888765
Q ss_pred HH---HHHHhcC-CccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHH
Q 018246 238 PA---KVKAAMG-TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEML 313 (359)
Q Consensus 238 ~~---~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~ 313 (359)
.+ .+.+... ++|+++|++|....+..++++|+++|+++.+|........+......+++++.++.....+++.+++
T Consensus 230 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 309 (350)
T cd08240 230 PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELV 309 (350)
T ss_pred ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHH
Confidence 32 3333333 7999999999766689999999999999999876544344444455689999998888788899999
Q ss_pred HHHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 314 DFCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 314 ~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
++++++.+++.. ..++++++++||+.+.+++..||+++.
T Consensus 310 ~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 310 ALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred HHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 999999987644 889999999999999998888999975
No 40
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=5.3e-42 Score=322.57 Aligned_cols=336 Identities=21% Similarity=0.285 Sum_probs=276.5
Q ss_pred cceeeeeecCCCCCccceeeecCCC-CCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRET-GADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
|+++.+. +++.+++.+++.|.+ ++++|+||+.++++|++|+..+.|.++...+|.++|||++|+|+++|+++++++
T Consensus 1 m~a~~~~---~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 77 (386)
T cd08283 1 MKALVWH---GKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLK 77 (386)
T ss_pred CeeEEEe---cCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCC
Confidence 5677765 456799999999988 499999999999999999999999876556788999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCccccccc--------ccccCCCC-----CCCCccceEEEeeCC--ceEECCC
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTY--------NSIDRDGT-----KTYGGYSDLIVVDQH--YVLRFPD 154 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~--------~~~~~~g~-----~~~g~~a~~~~~~~~--~~~~lp~ 154 (359)
+||+|++.+.. .|++|.+|..+.+++|.++.... ......|. ..+|+|++|++++.+ .++++|+
T Consensus 78 ~Gd~V~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~ 156 (386)
T cd08283 78 VGDRVVVPFTI-ACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPD 156 (386)
T ss_pred CCCEEEEcCcC-CCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCC
Confidence 99999776555 79999999999999998864321 10011111 136999999999988 8999999
Q ss_pred CCCccccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEe
Q 018246 155 NMPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFL 233 (359)
Q Consensus 155 ~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~ 233 (359)
+++++++++++..+.|||+++ ....+.+|++|||+|+|.+|++++++|++.|+ +|+++++++++.+.+ ++++...++
T Consensus 157 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~-~~~~~~~vi 234 (386)
T cd08283 157 DLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMA-RSHLGAETI 234 (386)
T ss_pred CCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCcEEE
Confidence 999999999999999999999 66667999999999999999999999999998 699999999998888 667433567
Q ss_pred cCCCHH-H---HHHhcC--CccEEEECCCCh---------------------hhHHHHHhccccCCEEEEecCCCC-Cee
Q 018246 234 VSSDPA-K---VKAAMG--TMDYIIDTVSAV---------------------HSLAPLLGLLKVNGKLVTVGLPEK-PLE 285 (359)
Q Consensus 234 ~~~~~~-~---~~~~~~--~~d~vid~~g~~---------------------~~~~~~~~~l~~~G~~v~~g~~~~-~~~ 285 (359)
++...+ . +..+.. ++|++||++|+. ..++.++++++++|+++.+|.... ...
T Consensus 235 ~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~ 314 (386)
T cd08283 235 NFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNK 314 (386)
T ss_pred cCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCc
Confidence 665432 2 333333 799999999753 347889999999999999987654 334
Q ss_pred eCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCccc--E-EEEccccHHHHHHHHHcCC-ccEEEEEE
Q 018246 286 VPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAAD--I-ELVRMDQINTAMERLAKSD-VKYRFVID 352 (359)
Q Consensus 286 ~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~--~-~~~~l~~~~~a~~~~~~~~-~~gkvvv~ 352 (359)
++....+.+++++.+........++++++++.++++.+. + +.|+++++++||+.+.+++ ..+|++++
T Consensus 315 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 385 (386)
T cd08283 315 FPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK 385 (386)
T ss_pred cCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence 555566789999999877667789999999999999752 3 7899999999999988876 45899985
No 41
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=6.8e-42 Score=323.22 Aligned_cols=341 Identities=18% Similarity=0.249 Sum_probs=284.7
Q ss_pred CCcccceeeeee--cCCC-CCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC----------CCCCC-Ccccc
Q 018246 7 TEHPQKAIGWAA--RDNT-GTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG----------VTNYP-IVPGH 72 (359)
Q Consensus 7 ~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~----------~~~~p-~~~G~ 72 (359)
++++||++.++. ++.+ +.+++.+++.|.+++++|+||+.++++|++|++...+... ....| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 567899999965 4433 5689999999999999999999999999999877655321 01123 37999
Q ss_pred cccEEEEEeCCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEEC
Q 018246 73 EIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRF 152 (359)
Q Consensus 73 e~~G~V~~vG~~v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~l 152 (359)
|++|+|+++|++++.+++||+|++.+.. .|++|.+|..|.+++|....+. +. ...+|+|++|++++++.++++
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--g~----~~~~g~~ae~~~v~~~~~~~v 156 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQ-VDLTAPDGRVGDPMLSSEQRIW--GY----ETNFGSFAEFALVKDYQLMPK 156 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEcccc-ccCCchhhccCccccccccccc--cc----cCCCccceEEEEechHHeEEC
Confidence 9999999999999999999999877554 8999999999999999765321 11 124689999999999999999
Q ss_pred CCCCCccccccccchhhhhhhHhHh--cCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC
Q 018246 153 PDNMPLDAGAPLLCAGITVYSPMKY--YGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGA 229 (359)
Q Consensus 153 p~~l~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~ 229 (359)
|+++++++++.+.+.+.|||+++.. ...+.+|++|+|+|+ |++|++++++|+++|++++++++++++.+.+ +++|+
T Consensus 157 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~-~~~g~ 235 (398)
T TIGR01751 157 PKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC-RELGA 235 (398)
T ss_pred CCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHcCC
Confidence 9999999999999999999999875 456689999999997 9999999999999999999998898888888 77999
Q ss_pred cEEecCCCH-------------------------HHHHHhc--CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCC
Q 018246 230 DAFLVSSDP-------------------------AKVKAAM--GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK 282 (359)
Q Consensus 230 ~~v~~~~~~-------------------------~~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 282 (359)
+.++|+++. ..+.+++ +++|++|||+|... +..++++++++|+++.+|....
T Consensus 236 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~ 314 (398)
T TIGR01751 236 EAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT-FPTSVFVCRRGGMVVICGGTTG 314 (398)
T ss_pred CEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH-HHHHHHhhccCCEEEEEccccC
Confidence 999986532 1122233 26999999999755 8899999999999999987654
Q ss_pred -CeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEEcCCC
Q 018246 283 -PLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVIDVGNS 356 (359)
Q Consensus 283 -~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~~ 356 (359)
...++...++.++.++.++......++++++++++++++.+.+ +++++++++++|+.+.++...||+|+++...
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~~ 390 (398)
T TIGR01751 315 YNHDYDNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVLAP 390 (398)
T ss_pred CCCCcCHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeCCC
Confidence 3456667777788899998888888899999999999998655 8999999999999999998889999998764
No 42
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=1.2e-41 Score=318.73 Aligned_cols=336 Identities=26% Similarity=0.366 Sum_probs=269.8
Q ss_pred ccceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 10 PQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
++++..+. .+++.+++++++.|.+.++||+|||.++++|++|++.+.|.+. ..+|.++|||++|+|+++|++++.++
T Consensus 7 ~~~a~~~~--~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~ 83 (373)
T cd08299 7 KCKAAVLW--EPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVK 83 (373)
T ss_pred eeEEEEEe--cCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCC
Confidence 45655444 5666789999999999999999999999999999999988753 45688999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCccccccc-cccc--------CCC-----CCCCCccceEEEeeCCceEECCCC
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTY-NSID--------RDG-----TKTYGGYSDLIVVDQHYVLRFPDN 155 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~-~~~~--------~~g-----~~~~g~~a~~~~~~~~~~~~lp~~ 155 (359)
+||+|++.+ ..+|+.|.+|+.+.++.|....... .+.. ..| ....|+|+||+++|+++++++|++
T Consensus 84 ~Gd~V~~~~-~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~ 162 (373)
T cd08299 84 PGDKVIPLF-VPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAA 162 (373)
T ss_pred CCCEEEECC-CCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCC
Confidence 999997765 5599999999999999998764310 0000 001 113589999999999999999999
Q ss_pred CCccccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEec
Q 018246 156 MPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLV 234 (359)
Q Consensus 156 l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~ 234 (359)
+++++++.+.+++.|||+++.....+++|++|||+|+|++|++++++|+..|+ +|+++++++++++.+ +++|++++++
T Consensus 163 l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~lGa~~~i~ 241 (373)
T cd08299 163 APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KELGATECIN 241 (373)
T ss_pred CChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEec
Confidence 99999999999999999998777777999999999999999999999999999 899999999999988 8899999888
Q ss_pred CCCH-----HHHHHhc-CCccEEEECCCChhhHHHHHhcc-ccCCEEEEecCCCCC--eeeCHHHHHhcCcEEEEeecCC
Q 018246 235 SSDP-----AKVKAAM-GTMDYIIDTVSAVHSLAPLLGLL-KVNGKLVTVGLPEKP--LEVPIFALVGARRLVGGSNVGG 305 (359)
Q Consensus 235 ~~~~-----~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~--~~~~~~~~~~k~~~i~g~~~~~ 305 (359)
..+. ..+.+++ +++|+++|++|++..+..++..+ +++|+++.+|..... ..++... +.++.++.++....
T Consensus 242 ~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~~ 320 (373)
T cd08299 242 PQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPML-LLTGRTWKGAVFGG 320 (373)
T ss_pred ccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHH-HhcCCeEEEEEecC
Confidence 6542 2233333 37999999999766577766655 679999999976432 3444432 34678888877654
Q ss_pred H---HHHHHHHHHHHhCCCc--ccE-EEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 306 M---KETQEMLDFCAKHNIA--ADI-ELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 306 ~---~~~~~~~~~l~~g~i~--~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
+ .++.++++.+.++.++ +.+ +.|+++++++||+.+.+++. .|+++.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~ 372 (373)
T cd08299 321 WKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLT 372 (373)
T ss_pred CccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEe
Confidence 3 5677788887777653 334 89999999999998887664 587775
No 43
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=1.3e-41 Score=317.79 Aligned_cols=336 Identities=24% Similarity=0.381 Sum_probs=277.0
Q ss_pred ccceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 10 PQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
+||++++.. ..+.+++++.+.|.+.++||+|||.++++|++|++...|.++ ..+|.++|||++|+|+++|+++++++
T Consensus 2 ~~~a~~~~~--~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~ 78 (365)
T cd08278 2 KTTAAVVRE--PGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLK 78 (365)
T ss_pred ccEEeeecc--CCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCC
Confidence 467776654 334588899999999999999999999999999999988765 44678999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccc-ccccc--------CCC-------CCCCCccceEEEeeCCceEECC
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILT-YNSID--------RDG-------TKTYGGYSDLIVVDQHYVLRFP 153 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~-~~~~~--------~~g-------~~~~g~~a~~~~~~~~~~~~lp 153 (359)
+||+|++.+. .|+.|.+|..+..++|.+.... +.+.. .++ ....|+|++|+++++++++++|
T Consensus 79 ~Gd~V~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP 156 (365)
T cd08278 79 PGDHVVLSFA--SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVD 156 (365)
T ss_pred CCCEEEEccc--CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECC
Confidence 9999987653 7999999999999999876422 10100 000 1235899999999999999999
Q ss_pred CCCCccccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEE
Q 018246 154 DNMPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAF 232 (359)
Q Consensus 154 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v 232 (359)
+++++++++.+++++.||+.++.....++++++|||+|+|.+|++++++|++.|+ .|+++++++++.+.+ +++|++++
T Consensus 157 ~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~-~~~g~~~~ 235 (365)
T cd08278 157 KDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELA-KELGATHV 235 (365)
T ss_pred CCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCcEE
Confidence 9999999999999999999998887777999999999999999999999999999 688899998888777 88999999
Q ss_pred ecCCCHH---HHHHhc-CCccEEEECCCChhhHHHHHhccccCCEEEEecCCC--CCeeeCHHHHHhcCcEEEEeecCC-
Q 018246 233 LVSSDPA---KVKAAM-GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE--KPLEVPIFALVGARRLVGGSNVGG- 305 (359)
Q Consensus 233 ~~~~~~~---~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~k~~~i~g~~~~~- 305 (359)
+++++.+ .+.+.. .++|+++||+|+...+..++++++++|+++.+|... ....++...++.+++++.++....
T Consensus 236 i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (365)
T cd08278 236 INPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDS 315 (365)
T ss_pred ecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCc
Confidence 8876532 333333 489999999997666899999999999999998753 345677777768899998876432
Q ss_pred --HHHHHHHHHHHHhCCCcc--cEEEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 306 --MKETQEMLDFCAKHNIAA--DIELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 306 --~~~~~~~~~~l~~g~i~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
.+.+++++++++++++++ .+..++++++++|++.+.++.. -|++++
T Consensus 316 ~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~ 365 (365)
T cd08278 316 VPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKV-IKPVLR 365 (365)
T ss_pred ChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCc-eEEEEC
Confidence 345788999999999864 3478999999999999988765 488874
No 44
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=1.3e-41 Score=315.87 Aligned_cols=331 Identities=25% Similarity=0.401 Sum_probs=282.8
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
||++++.-++ ..+++.+.+.|.+.+++|+||+.++++|++|+....|..+...+|.++|+|++|+|+.+|++++.+++
T Consensus 1 m~a~~~~~~~--~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~ 78 (345)
T cd08260 1 MRAAVYEEFG--EPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRV 78 (345)
T ss_pred CeeEEEecCC--CCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCC
Confidence 6777765432 34888889999999999999999999999999998887665566789999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCC--ceEECCCCCCccccccccchh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQH--YVLRFPDNMPLDAGAPLLCAG 168 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~--~~~~lp~~l~~~~aa~l~~~~ 168 (359)
||+|+. +...+|+.|.+|..|..+.|...... +...+|+|++|+.+++. +++++|++++.++++.+++.+
T Consensus 79 Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~ 150 (345)
T cd08260 79 GDRVTV-PFVLGCGTCPYCRAGDSNVCEHQVQP-------GFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRF 150 (345)
T ss_pred CCEEEE-CCCCCCCCCccccCcCcccCCCCccc-------ccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccch
Confidence 999976 45568999999999999999986321 23346999999999974 899999999999999999999
Q ss_pred hhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC-HHH---HHHh
Q 018246 169 ITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSD-PAK---VKAA 244 (359)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~-~~~---~~~~ 244 (359)
.|||+++.....+.++++|+|+|+|.+|++++++|+..|++|+++++++++.+.+ +++|++.+++++. .+. +..+
T Consensus 151 ~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~ 229 (345)
T cd08260 151 ATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELA-RELGAVATVNASEVEDVAAAVRDL 229 (345)
T ss_pred HHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHhCCCEEEccccchhHHHHHHHH
Confidence 9999999777777999999999999999999999999999999999999998888 7899999998876 332 3333
Q ss_pred cC-CccEEEECCCChhhHHHHHhccccCCEEEEecCCCCC---eeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCC
Q 018246 245 MG-TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKP---LEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHN 320 (359)
Q Consensus 245 ~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~ 320 (359)
.. ++|++||++|+...+...+++++++|+++.+|..... ..+++..++.+++++.+........++.+++++++++
T Consensus 230 ~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 309 (345)
T cd08260 230 TGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGK 309 (345)
T ss_pred hCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCC
Confidence 33 7999999999755588999999999999999875432 4566666678899999988777888999999999999
Q ss_pred Ccc---cEEEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 321 IAA---DIELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 321 i~~---~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
+.+ ..+.++++++++||+.+.++...||+|++
T Consensus 310 i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 310 LDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred CChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 865 24889999999999999998888998864
No 45
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=2.3e-42 Score=318.05 Aligned_cols=303 Identities=21% Similarity=0.247 Sum_probs=251.5
Q ss_pred cceeeeeecCCC---CCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCC-CCCCCcccccccEEEEEeCCCCC
Q 018246 11 QKAIGWAARDNT---GTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGV-TNYPIVPGHEIVGTVTKVGNNVS 86 (359)
Q Consensus 11 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~ 86 (359)
||++++..++++ ..+++.+++.|.|+++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 577777765554 46888889999999999999999999999999999887642 45678999999999999999999
Q ss_pred C-CCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCcccccccc
Q 018246 87 K-FKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLL 165 (359)
Q Consensus 87 ~-~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~ 165 (359)
+ |++||+|++.+. .+|+|++|+++|++.++++|++++++++++++
T Consensus 81 ~~~~vGd~V~~~~~----------------------------------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~ 126 (324)
T cd08291 81 AQSLIGKRVAFLAG----------------------------------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSF 126 (324)
T ss_pred ccCCCCCEEEecCC----------------------------------CCCcchheeeecHHHeEECCCCCCHHHHhhhc
Confidence 6 999999975321 13899999999999999999999999999888
Q ss_pred chhhhhhhHhHhcCCCCCCCEEEEE--CCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---
Q 018246 166 CAGITVYSPMKYYGMTEPGKHLGVA--GLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK--- 240 (359)
Q Consensus 166 ~~~~ta~~~l~~~~~~~~g~~VlI~--G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~--- 240 (359)
+.+.|||.++. ...+ +++.++|+ |+|++|++++|+|+.+|++|+++++++++.+.+ +++|++++++++..+.
T Consensus 127 ~~~~ta~~~~~-~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~ 203 (324)
T cd08291 127 VNPLTALGMLE-TARE-EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLL-KKIGAEYVLNSSDPDFLED 203 (324)
T ss_pred ccHHHHHHHHH-hhcc-CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEECCCccHHHH
Confidence 88999986553 3333 55566664 569999999999999999999999999998888 7899999998776433
Q ss_pred HHHhcC--CccEEEECCCChhhHHHHHhccccCCEEEEecCCCCC-e-eeCHHHHHhcCcEEEEeecCC------HHHHH
Q 018246 241 VKAAMG--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKP-L-EVPIFALVGARRLVGGSNVGG------MKETQ 310 (359)
Q Consensus 241 ~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-~~~~~~~~~k~~~i~g~~~~~------~~~~~ 310 (359)
+.+.+. ++|++||++|+.. ....+++++++|+++.+|..... . .++...++.+++++.++.... .++++
T Consensus 204 v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (324)
T cd08291 204 LKELIAKLNATIFFDAVGGGL-TGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVK 282 (324)
T ss_pred HHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHH
Confidence 334443 7999999999877 77789999999999999865432 2 356677788999999877643 34688
Q ss_pred HHHHHHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 311 EMLDFCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 311 ~~~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
+++++++ +++++.+ ++|+|+++++||+.+.++...||+++.
T Consensus 283 ~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 283 KLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred HHHHHHh-CccccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 8888888 8898877 799999999999999998888999874
No 46
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=8.9e-42 Score=315.50 Aligned_cols=328 Identities=27% Similarity=0.427 Sum_probs=277.9
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
|+++++.. ....+++.+.+.|.+.++|++||+.++++|++|++...|.++...+|.++|||++|+|+.+|++++.+++
T Consensus 1 m~a~~~~~--~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 78 (334)
T PRK13771 1 MKAVILPG--FKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKP 78 (334)
T ss_pred CeeEEEcC--CCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCC
Confidence 56666553 3335899999999999999999999999999999988887665566788999999999999999988999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGIT 170 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~t 170 (359)
||+|++.++. .|++|.+|..|.++.|.+..+. |...+|+|++|+.++.+.++++|+++++++++.+.+.+.+
T Consensus 79 G~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~ 150 (334)
T PRK13771 79 GDRVASLLYA-PDGTCEYCRSGEEAYCKNRLGY-------GEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGM 150 (334)
T ss_pred CCEEEECCCC-CCcCChhhcCCCcccCcccccc-------ccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHH
Confidence 9999877554 9999999999999999886432 2335699999999999999999999999999999999999
Q ss_pred hhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH-HHHHHhcCCc
Q 018246 171 VYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDP-AKVKAAMGTM 248 (359)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~~~ 248 (359)
||+++... .++++++|+|+|+ |.+|++++++|++.|++|+++++++++.+.+ +++ ++++++.++. +.+.+. +++
T Consensus 151 a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~v~~~-~~~ 226 (334)
T PRK13771 151 VYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV-SKY-ADYVIVGSKFSEEVKKI-GGA 226 (334)
T ss_pred HHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHH-HHHhcCchhHHHHHHhc-CCC
Confidence 99999887 6699999999987 9999999999999999999999999998887 777 7777665521 223333 479
Q ss_pred cEEEECCCChhhHHHHHhccccCCEEEEecCCCCCe--eeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcccE-
Q 018246 249 DYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPL--EVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADI- 325 (359)
Q Consensus 249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~~- 325 (359)
|+++|++|+.. +..++++++++|+++.+|...... .......+.+++++.+......++++.++++++++.+++.+
T Consensus 227 d~~ld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 305 (334)
T PRK13771 227 DIVIETVGTPT-LEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPVIG 305 (334)
T ss_pred cEEEEcCChHH-HHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCCcceEe
Confidence 99999999876 889999999999999998754321 24444446788999887767788899999999999997655
Q ss_pred EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 326 ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 326 ~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
+.|+++++++||+.+.++...||+++.+
T Consensus 306 ~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 306 AEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred eeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 7899999999999999888789999864
No 47
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.9e-41 Score=314.20 Aligned_cols=333 Identities=35% Similarity=0.593 Sum_probs=286.4
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGV-TNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
||++.+..++ +..+++.+++.|.+.++||+||+.++++|++|+..+.|.++. ...+.++|+|++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~ 79 (341)
T cd08297 1 MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLK 79 (341)
T ss_pred CceEEeeccC-CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCC
Confidence 6788776544 457999999999999999999999999999999988876542 34466889999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhh
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGI 169 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ 169 (359)
+||+|+..+....|+.|++|..+..++|...... |....|+|++|++++.+.++++|+++++++++.++..+.
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ 152 (341)
T cd08297 80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS-------GYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGV 152 (341)
T ss_pred CCCEEEEecCCCCCCCCccccCCCcccCCCcccc-------ccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchH
Confidence 9999988777779999999999999999875322 223468999999999999999999999999999999999
Q ss_pred hhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHhc
Q 018246 170 TVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK---VKAAM 245 (359)
Q Consensus 170 ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~ 245 (359)
|||+++... .++++++|||+|+ +.+|++++++|+++|++|+++.+++++.+.+ +++|++.++++++.+. +.+..
T Consensus 153 ta~~~~~~~-~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~ 230 (341)
T cd08297 153 TVYKALKKA-GLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KELGADAFVDFKKSDDVEAVKELT 230 (341)
T ss_pred HHHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCcEEEcCCCccHHHHHHHHh
Confidence 999998776 5699999999987 6799999999999999999999999998888 7899999998876433 33443
Q ss_pred --CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCC-CeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCc
Q 018246 246 --GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-PLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIA 322 (359)
Q Consensus 246 --~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~ 322 (359)
+++|+++++.++...+..++++++++|+++.+|.... ..+++...++.++.++.++.....++++.+++++++++++
T Consensus 231 ~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 310 (341)
T cd08297 231 GGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVK 310 (341)
T ss_pred cCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCc
Confidence 3799999987766668999999999999999986554 2366667777899999987776678899999999999998
Q ss_pred ccEEEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 323 ADIELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 323 ~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
+.++.|++++++++|+.+.++...||+++++
T Consensus 311 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 311 PHIQVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred ceeEEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 7678899999999999999988889999874
No 48
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=6.6e-41 Score=313.04 Aligned_cols=327 Identities=22% Similarity=0.363 Sum_probs=271.5
Q ss_pred CCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEecc
Q 018246 20 DNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVL 99 (359)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~ 99 (359)
+.++.+++++++.|.+.+++|+|++.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.+++||+|++.+.
T Consensus 8 ~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~ 86 (365)
T cd05279 8 EKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFG 86 (365)
T ss_pred cCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCCEEEEcCC
Confidence 4555689999999999999999999999999999999988654 345789999999999999999999999999987654
Q ss_pred ccCCCCCccccCCCCCCCccccccc-ccccCC-------------CCCCCCccceEEEeeCCceEECCCCCCcccccccc
Q 018246 100 VASCQKCESCQQGLENYCPNMILTY-NSIDRD-------------GTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLL 165 (359)
Q Consensus 100 ~~~~~~c~~~~~~~~~~~~~~~~~~-~~~~~~-------------g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~ 165 (359)
..|++|.+|..+.+++|....+.. .+...+ +....|+|++|+.++++.++++|+++++++++.+.
T Consensus 87 -~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~ 165 (365)
T cd05279 87 -PQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIG 165 (365)
T ss_pred -CCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHHhhHhc
Confidence 489999999999999998875432 111101 11134799999999999999999999999999999
Q ss_pred chhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCH--HH--
Q 018246 166 CAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISTSPKKESEAISKLGADAFLVSSDP--AK-- 240 (359)
Q Consensus 166 ~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~-V~~v~~~~~~~~~~~~~~g~~~v~~~~~~--~~-- 240 (359)
+++.+||+++.....+++|++|||+|+|++|++++++|+..|++ |+++++++++.+.+ +++|++++++.++. +.
T Consensus 166 ~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~~ 244 (365)
T cd05279 166 CGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKA-KQLGATECINPRDQDKPIVE 244 (365)
T ss_pred cchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCCeecccccccchHHH
Confidence 99999999988887889999999999999999999999999995 77788888898888 89999999887654 22
Q ss_pred -HHHhc-CCccEEEECCCChhhHHHHHhccc-cCCEEEEecCCC--CCeeeCHHHHHhcCcEEEEeec---CCHHHHHHH
Q 018246 241 -VKAAM-GTMDYIIDTVSAVHSLAPLLGLLK-VNGKLVTVGLPE--KPLEVPIFALVGARRLVGGSNV---GGMKETQEM 312 (359)
Q Consensus 241 -~~~~~-~~~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~~~k~~~i~g~~~---~~~~~~~~~ 312 (359)
+.++. +++|+++|++|....+..++++++ ++|+++.+|... ....++...+ .++.++.|+.. ....++..+
T Consensus 245 ~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~ 323 (365)
T cd05279 245 VLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGGWKSKDSVPKL 323 (365)
T ss_pred HHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccCCchHhHHHHH
Confidence 33333 389999999987666899999999 999999998653 3556777776 67888888744 345778999
Q ss_pred HHHHHhCCCcc---cEEEEccccHHHHHHHHHcCCccEEEEE
Q 018246 313 LDFCAKHNIAA---DIELVRMDQINTAMERLAKSDVKYRFVI 351 (359)
Q Consensus 313 ~~~l~~g~i~~---~~~~~~l~~~~~a~~~~~~~~~~gkvvv 351 (359)
+++++++.+++ .+++++++++++||+.+.+++. .|+++
T Consensus 324 ~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~~~~~ 364 (365)
T cd05279 324 VALYRQKKFPLDELITHVLPFEEINDGFDLMRSGES-IRTIL 364 (365)
T ss_pred HHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCc-eeeee
Confidence 99999999864 3488999999999999887665 46665
No 49
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=4e-41 Score=311.46 Aligned_cols=333 Identities=34% Similarity=0.497 Sum_probs=286.9
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
||++.+..++.+. +.+.+.+.|.+++++|+|++.++++|++|+....|.++ ...+|.++|+|++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~ 79 (338)
T cd08254 1 MKAWRFHKGSKGL-LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFK 79 (338)
T ss_pred CeeEEEecCCCCc-eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCC
Confidence 5777777655554 67788888999999999999999999999999888765 344577899999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhh
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGI 169 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ 169 (359)
+||+|+..+.. .|+.|++|..+..+.|....+. |....|+|++|+.++.+.++++|+++++++++.++.++.
T Consensus 80 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ 151 (338)
T cd08254 80 VGDRVAVPAVI-PCGACALCRRGRGNLCLNQGMP-------GLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVL 151 (338)
T ss_pred CCCEEEECCCC-CCCCChhhhCcCcccCCCCCcc-------ccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHH
Confidence 99999876654 8999999999999999554322 334569999999999999999999999999999999999
Q ss_pred hhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHH--Hhc--
Q 018246 170 TVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVK--AAM-- 245 (359)
Q Consensus 170 ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~--~~~-- 245 (359)
|||+++.....++++++|||.|+|.+|++++++|+..|++|+++++++++.+.+ +++|.+++++..+..... ...
T Consensus 152 ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 230 (338)
T cd08254 152 TPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELA-KELGADEVLNSLDDSPKDKKAAGLG 230 (338)
T ss_pred HHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHhCCCEEEcCCCcCHHHHHHHhcC
Confidence 999999888888999999999889999999999999999999999999998888 789998888776532211 222
Q ss_pred CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcccE
Q 018246 246 GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADI 325 (359)
Q Consensus 246 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~~ 325 (359)
+++|+++|+++....+..++++|+++|+++.+|.......++...++.++.++.++.......+..++++++++.+++.+
T Consensus 231 ~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~ 310 (338)
T cd08254 231 GGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQV 310 (338)
T ss_pred CCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCcccc
Confidence 37999999998776689999999999999999876555566777788899999988877778899999999999998667
Q ss_pred EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 326 ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 326 ~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
+.+++++++++++.+.+++..||+|+++
T Consensus 311 ~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 311 ETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred eeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 8899999999999999998889999864
No 50
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.8e-41 Score=313.08 Aligned_cols=295 Identities=19% Similarity=0.212 Sum_probs=242.7
Q ss_pred CCccceee---ecC-CCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccc--cccEEEEEeCCCCCCCCCCCEEEE
Q 018246 23 GTFSPFHF---SRR-ETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGH--EIVGTVTKVGNNVSKFKEGDKVGV 96 (359)
Q Consensus 23 ~~~~~~~~---~~~-~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~--e~~G~V~~vG~~v~~~~vGdrV~v 96 (359)
+.|++++. +.| ++++|||||||.++++|+.|+....+.......|.++|+ |++|+|+.+|+++++|++||+|+.
T Consensus 25 ~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~ 104 (348)
T PLN03154 25 TDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISG 104 (348)
T ss_pred ccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEe
Confidence 45776663 445 358999999999999999998754432222345788998 889999999999999999999962
Q ss_pred eccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCc--eEE--CCCCCCcc-ccccccchhhhh
Q 018246 97 GVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHY--VLR--FPDNMPLD-AGAPLLCAGITV 171 (359)
Q Consensus 97 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~--~~~--lp~~l~~~-~aa~l~~~~~ta 171 (359)
.|+|+||.+++.+. +++ +|++++++ +++++++++.||
T Consensus 105 --------------------------------------~~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA 146 (348)
T PLN03154 105 --------------------------------------ITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTA 146 (348)
T ss_pred --------------------------------------cCCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHH
Confidence 16899999999753 544 58999986 688999999999
Q ss_pred hhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH----HHHHHhcC
Q 018246 172 YSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDP----AKVKAAMG 246 (359)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~----~~~~~~~~ 246 (359)
|+++.....+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+.+++|+++++++++. +.+.+.++
T Consensus 147 ~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~ 226 (348)
T PLN03154 147 YAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFP 226 (348)
T ss_pred HHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCC
Confidence 999988777799999999987 9999999999999999999999999998888447999999988642 22334433
Q ss_pred -CccEEEECCCChhhHHHHHhccccCCEEEEecCCCCC-e-----eeCHHHHHhcCcEEEEeecCCH-----HHHHHHHH
Q 018246 247 -TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKP-L-----EVPIFALVGARRLVGGSNVGGM-----KETQEMLD 314 (359)
Q Consensus 247 -~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~k~~~i~g~~~~~~-----~~~~~~~~ 314 (359)
++|++||++|+.. +..++++++++|+++.+|...+. . .++...++.|++++.|+....+ +.++++++
T Consensus 227 ~gvD~v~d~vG~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~ 305 (348)
T PLN03154 227 EGIDIYFDNVGGDM-LDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSR 305 (348)
T ss_pred CCcEEEEECCCHHH-HHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHH
Confidence 7999999999864 89999999999999999975432 1 1355677889999999876432 45788999
Q ss_pred HHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEEcCCC
Q 018246 315 FCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVIDVGNS 356 (359)
Q Consensus 315 ~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~~ 356 (359)
++++|++++.+ .+|+|+++++||+.+.+++..||+||++.++
T Consensus 306 l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~~ 348 (348)
T PLN03154 306 YYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAKE 348 (348)
T ss_pred HHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEecCC
Confidence 99999999877 5899999999999999999999999998654
No 51
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=4.4e-41 Score=312.44 Aligned_cols=333 Identities=22% Similarity=0.359 Sum_probs=274.4
Q ss_pred cceeeeeecCCCCCccceeeecCCC-CCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRET-GADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
||++.+. +++.+.+.+.+.|.+ .+++|+|||.++++|++|++.+.|.++...+|.++|+|++|+|+++|+++++++
T Consensus 1 ~ka~~~~---~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 77 (347)
T cd05278 1 MKALVYL---GPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLK 77 (347)
T ss_pred CceEEEe---cCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccC
Confidence 4566654 345588888999999 899999999999999999999988776566688999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCC--ceEECCCCCCccccccccch
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQH--YVLRFPDNMPLDAGAPLLCA 167 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~--~~~~lp~~l~~~~aa~l~~~ 167 (359)
+||+|+..+ ...|+.|.+|+.|..++|.+..+... .+...+|+|++|++++++ .++++|+++++++++.++++
T Consensus 78 ~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~ 152 (347)
T cd05278 78 PGDRVSVPC-ITFCGRCRFCRRGYHAHCENGLWGWK----LGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDI 152 (347)
T ss_pred CCCEEEecC-CCCCCCChhHhCcCcccCcCCCcccc----cccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcch
Confidence 999997654 44999999999999999988653321 122356999999999987 89999999999999999999
Q ss_pred hhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHH
Q 018246 168 GITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDPAK---VKA 243 (359)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~ 243 (359)
+.|||+++ ....++++++|||.|+|.+|++++|+|+..|+ +|+++++++++.+.+ +++|++.++++++.+. +..
T Consensus 153 ~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~i~~ 230 (347)
T cd05278 153 LPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLA-KEAGATDIINPKNGDIVEQILE 230 (347)
T ss_pred hhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH-HHhCCcEEEcCCcchHHHHHHH
Confidence 99999998 55667899999999889999999999999997 899998888887766 7899999988776433 333
Q ss_pred hc--CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeee-CHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCC
Q 018246 244 AM--GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEV-PIFALVGARRLVGGSNVGGMKETQEMLDFCAKHN 320 (359)
Q Consensus 244 ~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~ 320 (359)
.. +++|+++|++++...+...+++|+++|+++.+|........ .....+.+++++.++.......++++++++.++.
T Consensus 231 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (347)
T cd05278 231 LTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGK 310 (347)
T ss_pred HcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCC
Confidence 33 37999999999855589999999999999999865432211 1122346788888776655678999999999999
Q ss_pred Cccc---EEEEccccHHHHHHHHHcCCc-cEEEEEEc
Q 018246 321 IAAD---IELVRMDQINTAMERLAKSDV-KYRFVIDV 353 (359)
Q Consensus 321 i~~~---~~~~~l~~~~~a~~~~~~~~~-~gkvvv~~ 353 (359)
+++. ...+++++++++++.+..++. .+|+|+++
T Consensus 311 l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 311 IDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred CChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 9763 478999999999999888776 68998763
No 52
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=4e-41 Score=313.06 Aligned_cols=328 Identities=21% Similarity=0.349 Sum_probs=267.0
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC---------CCCCCCcccccccEEEEEe
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG---------VTNYPIVPGHEIVGTVTKV 81 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~---------~~~~p~~~G~e~~G~V~~v 81 (359)
||++++. +++.+++++++.|++++++|+||+.++++|++|++.+.|... ...+|.++|||++|+|+++
T Consensus 1 mka~~~~---~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~v 77 (350)
T cd08256 1 MRAVVCH---GPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVEL 77 (350)
T ss_pred CeeEEEe---cCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEe
Confidence 5666654 455689999999999999999999999999999998877531 1145778999999999999
Q ss_pred CCCCC--CCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCC-ceEECCCCCCc
Q 018246 82 GNNVS--KFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQH-YVLRFPDNMPL 158 (359)
Q Consensus 82 G~~v~--~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~-~~~~lp~~l~~ 158 (359)
|++++ +|++||+|+..+.. +|+.|.+|..|.+++|....+. +.. ....|+|++|+.++++ .++++|+++++
T Consensus 78 G~~v~~~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--g~~---~~~~g~~~~~~~~~~~~~~~~lP~~~~~ 151 (350)
T cd08256 78 GEGAEERGVKVGDRVISEQIV-PCWNCRFCNRGQYWMCQKHDLY--GFQ---NNVNGGMAEYMRFPKEAIVHKVPDDIPP 151 (350)
T ss_pred CCCcccCCCCCCCEEEECCcC-CCCCChHHhCcCcccCcCccce--eec---cCCCCcceeeEEcccccceEECCCCCCH
Confidence 99999 89999999766544 8999999999999999754321 110 1246999999999988 58899999999
Q ss_pred cccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCC
Q 018246 159 DAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSD 237 (359)
Q Consensus 159 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~ 237 (359)
++++.+ .++.|+|+++ ....+++|++|+|.|+|.+|++++++|+++|+ .++++++++++.+.+ +++|++++++++.
T Consensus 152 ~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~ 228 (350)
T cd08256 152 EDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALA-RKFGADVVLNPPE 228 (350)
T ss_pred HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHH-HHcCCcEEecCCC
Confidence 999888 8889999998 55566999999998889999999999999998 577788888887766 8899999888765
Q ss_pred H---HHHHHhcC--CccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHH-HhcCcEEEEeecCCHHHHHH
Q 018246 238 P---AKVKAAMG--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFAL-VGARRLVGGSNVGGMKETQE 311 (359)
Q Consensus 238 ~---~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~k~~~i~g~~~~~~~~~~~ 311 (359)
. +.+.++.. ++|+++|++|+...+..++++++++|+++.+|.......++...+ ..+++++.++.... ..+.+
T Consensus 229 ~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~ 307 (350)
T cd08256 229 VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGP-YCYPI 307 (350)
T ss_pred cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCc-hhHHH
Confidence 3 33444443 699999999975558899999999999999986554444444433 35678888776543 46889
Q ss_pred HHHHHHhCCCcc---cEEEEccccHHHHHHHHHcCCccEEEEE
Q 018246 312 MLDFCAKHNIAA---DIELVRMDQINTAMERLAKSDVKYRFVI 351 (359)
Q Consensus 312 ~~~~l~~g~i~~---~~~~~~l~~~~~a~~~~~~~~~~gkvvv 351 (359)
++++++++.+++ ..+.|+++++++||+.+.+++..+|+++
T Consensus 308 ~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 308 AIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred HHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 999999999986 3489999999999999999888899874
No 53
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=1.3e-40 Score=311.11 Aligned_cols=335 Identities=24% Similarity=0.394 Sum_probs=276.3
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
||++.+... .+.+++.+++.|.+++++|+|++.++++|++|+..+.|.++ ..+|.++|+|++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~ 77 (363)
T cd08279 1 MRAAVLHEV--GKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKP 77 (363)
T ss_pred CeEEEEecC--CCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCC
Confidence 567776643 24588889999999999999999999999999999888765 445778999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccc--------cCCC-----CCCCCccceEEEeeCCceEECCCCCC
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSI--------DRDG-----TKTYGGYSDLIVVDQHYVLRFPDNMP 157 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~--------~~~g-----~~~~g~~a~~~~~~~~~~~~lp~~l~ 157 (359)
||+|+..+.. .|+.|.+|++++.+.|.+..+...+- ...| ....|+|++|+.++.+.++++|++++
T Consensus 78 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~ 156 (363)
T cd08279 78 GDHVVLSWIP-ACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP 156 (363)
T ss_pred CCEEEECCCC-CCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence 9999766544 99999999999999998654311100 0001 12459999999999999999999999
Q ss_pred ccccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCC
Q 018246 158 LDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISTSPKKESEAISKLGADAFLVSS 236 (359)
Q Consensus 158 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~-V~~v~~~~~~~~~~~~~~g~~~v~~~~ 236 (359)
+++++.+++.+.+||.++.....+.++++|||+|+|.+|++++++|+..|++ |+++++++++.+.+ +++|++++++++
T Consensus 157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~-~~~g~~~vv~~~ 235 (363)
T cd08279 157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELA-RRFGATHTVNAS 235 (363)
T ss_pred hHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHhCCeEEeCCC
Confidence 9999999999999999988878889999999998899999999999999995 99999999888877 789999998876
Q ss_pred CHH---HHHHhc--CCccEEEECCCChhhHHHHHhccccCCEEEEecCCC--CCeeeCHHHHHhcCcEEEEeec---CCH
Q 018246 237 DPA---KVKAAM--GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE--KPLEVPIFALVGARRLVGGSNV---GGM 306 (359)
Q Consensus 237 ~~~---~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~k~~~i~g~~~---~~~ 306 (359)
..+ .+.++. .++|+++|++++...+...+++++++|+++.+|... ....++...+..++..+.++.. ...
T Consensus 236 ~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (363)
T cd08279 236 EDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPR 315 (363)
T ss_pred CccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcH
Confidence 543 343443 379999999997666899999999999999998654 2456677777667888777644 235
Q ss_pred HHHHHHHHHHHhCCCcc---cEEEEccccHHHHHHHHHcCCccEEEE
Q 018246 307 KETQEMLDFCAKHNIAA---DIELVRMDQINTAMERLAKSDVKYRFV 350 (359)
Q Consensus 307 ~~~~~~~~~l~~g~i~~---~~~~~~l~~~~~a~~~~~~~~~~gkvv 350 (359)
..+++++++++++++++ ..++|+++++++||+.+.+++..+.++
T Consensus 316 ~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 316 RDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 77999999999999975 337899999999999999888765554
No 54
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=8.4e-41 Score=308.46 Aligned_cols=323 Identities=45% Similarity=0.798 Sum_probs=278.4
Q ss_pred CCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEecc
Q 018246 20 DNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVL 99 (359)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~ 99 (359)
+..+.+++.+.+.|.+.+++|+|++.++++|++|++.+.|.+....+|.++|+|++|+|+++|++++++++||+|++.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~ 86 (330)
T cd08245 7 AAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWL 86 (330)
T ss_pred cCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCEEEEccc
Confidence 34357899999999999999999999999999999998887654556788999999999999999999999999988877
Q ss_pred ccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhhhhHhHhcC
Q 018246 100 VASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYG 179 (359)
Q Consensus 100 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~ 179 (359)
..+|+.|.+|..+.++.|.+..+. +....|+|++|+++|.+.++++|+++++++++.+.+.+.|||.++.. .
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~ 158 (330)
T cd08245 87 VGSCGRCEYCRRGLENLCQKAVNT-------GYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-A 158 (330)
T ss_pred cCCCCCChhhhCcCcccCcCcccc-------CcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-h
Confidence 779999999999999999986442 22245899999999999999999999999999999999999999977 4
Q ss_pred CCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChh
Q 018246 180 MTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVH 259 (359)
Q Consensus 180 ~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 259 (359)
.+.++++|||+|+|.+|++++++|+..|++|+++++++++.+.+ +++|++.+++....+......+++|+++++++...
T Consensus 159 ~~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~ 237 (330)
T cd08245 159 GPRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKRELA-RKLGADEVVDSGAELDEQAAAGGADVILVTVVSGA 237 (330)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhCCcEEeccCCcchHHhccCCCCEEEECCCcHH
Confidence 56999999999988899999999999999999999999998888 78999888876554333333347999999988766
Q ss_pred hHHHHHhccccCCEEEEecCCCCC-eeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcccEEEEccccHHHHHH
Q 018246 260 SLAPLLGLLKVNGKLVTVGLPEKP-LEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADIELVRMDQINTAME 338 (359)
Q Consensus 260 ~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~~~~~~l~~~~~a~~ 338 (359)
.+..++++++++|+++.++..... ..+....++.++.++.++.......++.+++++.++.+++.++.+++++++++|+
T Consensus 238 ~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~a~~ 317 (330)
T cd08245 238 AAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKPMIETFPLDQANEAYE 317 (330)
T ss_pred HHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcceEEEEcHHHHHHHHH
Confidence 689999999999999999865432 2333556778899999988887888999999999999987668999999999999
Q ss_pred HHHcCCccEEEEE
Q 018246 339 RLAKSDVKYRFVI 351 (359)
Q Consensus 339 ~~~~~~~~gkvvv 351 (359)
.+.++...||+|+
T Consensus 318 ~~~~~~~~~~~v~ 330 (330)
T cd08245 318 RMEKGDVRFRFVL 330 (330)
T ss_pred HHHcCCCCcceeC
Confidence 9998888888875
No 55
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.2e-40 Score=307.35 Aligned_cols=326 Identities=28% Similarity=0.487 Sum_probs=276.2
Q ss_pred cceeeeeecCC--CCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 018246 11 QKAIGWAARDN--TGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKF 88 (359)
Q Consensus 11 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 88 (359)
|+++++...+. +..+++.+.+.|.++++||+||+.++++|++|++...|.++....|.++|||++|+|+++|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 56666654332 2357777888888999999999999999999999998876655668899999999999999999999
Q ss_pred CCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchh
Q 018246 89 KEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAG 168 (359)
Q Consensus 89 ~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~ 168 (359)
++||+|++.+....|++|.+|..+.++.|....+. |...+|+|++|++++.+.++++|+++++.+++.+++++
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~ 153 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT-------GYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAG 153 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc-------ccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhh
Confidence 99999988776678999999999999999987643 22346899999999999999999999999999999999
Q ss_pred hhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCc
Q 018246 169 ITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTM 248 (359)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~ 248 (359)
.|||+++ ....++++++|||+|+|++|++++++|++.|++|+++++++++.+.+ +++|++++++.+.. ..+++
T Consensus 154 ~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~~v 226 (329)
T cd08298 154 IIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELA-RELGADWAGDSDDL-----PPEPL 226 (329)
T ss_pred HHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHHH-HHhCCcEEeccCcc-----CCCcc
Confidence 9999999 66777999999999999999999999999999999999999998888 88999888766532 12379
Q ss_pred cEEEECCCChhhHHHHHhccccCCEEEEecCCCCCe-eeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcccEEE
Q 018246 249 DYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPL-EVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADIEL 327 (359)
Q Consensus 249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~~~~ 327 (359)
|+++++.+....++.++++++++|+++.+|...... .+++.. +.++..+.++.......++.++++++++.+++.++.
T Consensus 227 D~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~~~~~ 305 (329)
T cd08298 227 DAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPEVET 305 (329)
T ss_pred cEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEecCCCHHHHHHHHHHHHcCCCCceEEE
Confidence 999998776666899999999999999988543222 233333 457778888877777889999999999999876789
Q ss_pred EccccHHHHHHHHHcCCccEEEEE
Q 018246 328 VRMDQINTAMERLAKSDVKYRFVI 351 (359)
Q Consensus 328 ~~l~~~~~a~~~~~~~~~~gkvvv 351 (359)
|+++++++||+.+.+++..||+|+
T Consensus 306 ~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 306 YPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred EeHHHHHHHHHHHHcCCCcceeeC
Confidence 999999999999999888899874
No 56
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=2.6e-40 Score=305.25 Aligned_cols=328 Identities=30% Similarity=0.442 Sum_probs=276.5
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
|+++++.. .+..+.+.+.+.|.+.+++|+|+++++++|++|++.+.|.++....|.++|+|++|+|+++|++++.+++
T Consensus 1 m~a~~~~~--~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~ 78 (332)
T cd08259 1 MKAAILHK--PNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKP 78 (332)
T ss_pred CeEEEEec--CCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCC
Confidence 56666653 3556888899999999999999999999999999999887665566789999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGIT 170 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~t 170 (359)
||+|+..+.. .|+.|.+|..+.++.|.+... .|....|+|++|++++.+.++++|+++++++++.+++++.+
T Consensus 79 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~t 150 (332)
T cd08259 79 GDRVILYYYI-PCGKCEYCLSGEENLCRNRAE-------YGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGT 150 (332)
T ss_pred CCEEEECCCC-CCcCChhhhCCCcccCCCccc-------cccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHH
Confidence 9999877555 799999999999999987521 12345699999999999999999999999999999999999
Q ss_pred hhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH-HHHHHhcCCc
Q 018246 171 VYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDP-AKVKAAMGTM 248 (359)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~~~ 248 (359)
||++++. ..+.+++++||+|+ |++|++++++++..|++|+++++++++.+.+ ++++.+.+++..+. +.+... .++
T Consensus 151 a~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~ 227 (332)
T cd08259 151 AVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KELGADYVIDGSKFSEDVKKL-GGA 227 (332)
T ss_pred HHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCCcEEEecHHHHHHHHhc-cCC
Confidence 9999988 66789999999986 9999999999999999999999998888887 78898887765431 222222 279
Q ss_pred cEEEECCCChhhHHHHHhccccCCEEEEecCCCCCe-eeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcccE-E
Q 018246 249 DYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPL-EVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADI-E 326 (359)
Q Consensus 249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~~-~ 326 (359)
|++++++|... +..++++++++|+++.+|...... .++......++.++.++......+++++++++.++.+++.+ +
T Consensus 228 d~v~~~~g~~~-~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 306 (332)
T cd08259 228 DVVIELVGSPT-IEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPVIDR 306 (332)
T ss_pred CEEEECCChHH-HHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCccceeE
Confidence 99999999877 889999999999999998654322 23444444678888887766778899999999999997655 7
Q ss_pred EEccccHHHHHHHHHcCCccEEEEEE
Q 018246 327 LVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 327 ~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
.|+++++++||+.+.++...||++++
T Consensus 307 ~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 307 VVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred EEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 99999999999999998888999874
No 57
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=2.7e-40 Score=306.97 Aligned_cols=331 Identities=22% Similarity=0.337 Sum_probs=275.4
Q ss_pred cceeeeeecCCCCCccceeeecCCC-CCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRET-GADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
||++++. +++.+++.+++.|+| .++||+|||+++++|++|+..+.|.++...+|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~---~~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 77 (345)
T cd08286 1 MKALVYH---GPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFK 77 (345)
T ss_pred CceEEEe---cCCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccC
Confidence 5666654 344588999999986 899999999999999999999988776555678999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCC--ceEECCCCCCccccccccch
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQH--YVLRFPDNMPLDAGAPLLCA 167 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~--~~~~lp~~l~~~~aa~l~~~ 167 (359)
+||+|++.+.. .|+.|.+|..+.++.|....+. .|...+|+|++|+.++.+ .++++|++++.++++.+++.
T Consensus 78 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~ 150 (345)
T cd08286 78 VGDRVLISCIS-SCGTCGYCRKGLYSHCESGGWI------LGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDI 150 (345)
T ss_pred CCCEEEECCcC-CCCCChHHHCcCcccCCCcccc------cccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccch
Confidence 99999776655 7999999999999998865332 123356999999999987 89999999999999999999
Q ss_pred hhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHH
Q 018246 168 GITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFG-LKVTVISTSPKKESEAISKLGADAFLVSSDPAK---VKA 243 (359)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g-~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~ 243 (359)
+.|||.++.....+.+|++|||+|+|.+|.+++|+|+.+| .+|+++++++++.+.+ +++|++.+++++..+. +..
T Consensus 151 ~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~i~~ 229 (345)
T cd08286 151 LPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVA-KKLGATHTVNSAKGDAIEQVLE 229 (345)
T ss_pred hHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCceeccccccHHHHHHH
Confidence 9999998766667799999999999999999999999999 6999988888887766 7899999998765432 333
Q ss_pred hcC--CccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCC
Q 018246 244 AMG--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNI 321 (359)
Q Consensus 244 ~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i 321 (359)
... ++|+++|+++....+..++++++++|+++.+|.......+++..++.+++++.+.... ...++.++++++++.+
T Consensus 230 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l 308 (345)
T cd08286 230 LTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVD-TNTTPMLLKLVSSGKL 308 (345)
T ss_pred HhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCc-hhhHHHHHHHHHcCCC
Confidence 332 7999999999766688999999999999999876545566777767899999875442 3568889999999998
Q ss_pred cc---cEEEEccccHHHHHHHHHcCC--ccEEEEEEc
Q 018246 322 AA---DIELVRMDQINTAMERLAKSD--VKYRFVIDV 353 (359)
Q Consensus 322 ~~---~~~~~~l~~~~~a~~~~~~~~--~~gkvvv~~ 353 (359)
++ ..+++++++++++|+.+.... ...|++|++
T Consensus 309 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 309 DPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred ChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 64 348899999999999998763 346999863
No 58
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=3.2e-40 Score=309.53 Aligned_cols=333 Identities=23% Similarity=0.288 Sum_probs=270.4
Q ss_pred cceeeeeecCCCCCccceeeecCCC-CCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRET-GADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
|+++++. +++.+++++++.|.+ +++||+|||+++++|++|++.+.|.++ ...|.++|||++|+|+++|++++.++
T Consensus 1 m~~~~~~---~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~ 76 (375)
T cd08282 1 MKAVVYG---GPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLK 76 (375)
T ss_pred CceEEEe---cCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCC
Confidence 4555543 455789999999996 799999999999999999999988765 44588999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCccccccccccc---CCCCCCCCccceEEEeeCC--ceEECCCCCCcc---cc
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSID---RDGTKTYGGYSDLIVVDQH--YVLRFPDNMPLD---AG 161 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~g~~a~~~~~~~~--~~~~lp~~l~~~---~a 161 (359)
+||+|++.+ ...|+.|..|+.+..+.|.+..+.+.+.. ..+...+|+|++|+++|.+ .++++|++++++ ++
T Consensus 77 ~Gd~V~~~~-~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~ 155 (375)
T cd08282 77 VGDRVVVPF-NVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDY 155 (375)
T ss_pred CCCEEEEeC-CCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhhe
Confidence 999996654 44799999999999999987533221111 1112246999999999976 899999999998 56
Q ss_pred ccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHH-
Q 018246 162 APLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDPA- 239 (359)
Q Consensus 162 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~- 239 (359)
+.+...+.|||+++ ....+.+|++|+|.|+|++|++++++|++.|+ +|+++++++++.+.+ +++|+. .+++++.+
T Consensus 156 a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~-~v~~~~~~~ 232 (375)
T cd08282 156 LMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLA-ESIGAI-PIDFSDGDP 232 (375)
T ss_pred eeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCCe-EeccCcccH
Confidence 78888899999998 55666899999999899999999999999998 899999998888777 789984 45665433
Q ss_pred --HHHHhcC-CccEEEECCCChh-----------hHHHHHhccccCCEEEEecCCCC-------------CeeeCHHHHH
Q 018246 240 --KVKAAMG-TMDYIIDTVSAVH-----------SLAPLLGLLKVNGKLVTVGLPEK-------------PLEVPIFALV 292 (359)
Q Consensus 240 --~~~~~~~-~~d~vid~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~~-------------~~~~~~~~~~ 292 (359)
.+.+++. ++|+++||+|+.. .+..++++++++|+++.+|.... ...++...++
T Consensus 233 ~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (375)
T cd08282 233 VEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLW 312 (375)
T ss_pred HHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHH
Confidence 2333333 7999999999763 47899999999999998875431 1345666777
Q ss_pred hcCcEEEEeecCCHHHHHHHHHHHHhCCCcc---cEEEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 293 GARRLVGGSNVGGMKETQEMLDFCAKHNIAA---DIELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 293 ~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~---~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
.++.++.+........+..++++++++++++ ..+.|+++++++||+.+.++. .+|+|++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~ 374 (375)
T cd08282 313 AKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIK 374 (375)
T ss_pred hcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeC
Confidence 8888888776666677899999999999986 348999999999999999888 8999985
No 59
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=4.3e-40 Score=304.66 Aligned_cols=328 Identities=25% Similarity=0.412 Sum_probs=272.7
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
|+++.+. .++.+++.+.+.|.+.++||+|+|.++++|+.|+....|.++....|.++|+|++|+|+++|++++.+++
T Consensus 1 ~~a~~~~---~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~ 77 (337)
T cd08261 1 MKALVCE---KPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKV 77 (337)
T ss_pred CeEEEEe---CCCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCC
Confidence 4566654 3456888899999999999999999999999999998887654455778999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGIT 170 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~t 170 (359)
||+|+..+.. .|+.|..|+.+.+|.|.+... .+....|+|++|++++++ ++++|+++++++++.+ ..+.+
T Consensus 78 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~ 147 (337)
T cd08261 78 GDRVVVDPYI-SCGECYACRKGRPNCCENLQV-------LGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAI 147 (337)
T ss_pred CCEEEECCCC-CCCCChhhhCcCcccCCCCCe-------eeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHH
Confidence 9999765444 899999999999999943211 122345999999999999 9999999999998876 56678
Q ss_pred hhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHhcC-
Q 018246 171 VYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPA---KVKAAMG- 246 (359)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~- 246 (359)
+++++ ....+.+|++|||+|+|.+|.+++++|+.+|++|+++.+++++.+.+ +++|+++++++++.+ .+.+...
T Consensus 148 a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~-~~~g~~~v~~~~~~~~~~~l~~~~~~ 225 (337)
T cd08261 148 GAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERLEFA-RELGADDTINVGDEDVAARLRELTDG 225 (337)
T ss_pred HHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEECCCHHHHHHH-HHhCCCEEecCcccCHHHHHHHHhCC
Confidence 88887 55667999999999889999999999999999999999998888877 889999999887643 3444433
Q ss_pred -CccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcc--
Q 018246 247 -TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAA-- 323 (359)
Q Consensus 247 -~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~-- 323 (359)
++|+++|++++...+..++++|+++|+++.+|.......++...+..+++++.+......+.++.++++++++.+++
T Consensus 226 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~ 305 (337)
T cd08261 226 EGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEA 305 (337)
T ss_pred CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhh
Confidence 69999999987666889999999999999998665444555556667888888876666677999999999999986
Q ss_pred cE-EEEccccHHHHHHHHHcCC-ccEEEEEEc
Q 018246 324 DI-ELVRMDQINTAMERLAKSD-VKYRFVIDV 353 (359)
Q Consensus 324 ~~-~~~~l~~~~~a~~~~~~~~-~~gkvvv~~ 353 (359)
.. ..+++++++++++.+.+++ ..+|+|+++
T Consensus 306 ~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 306 LITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred heEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 44 8899999999999999884 679999864
No 60
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=6.2e-41 Score=283.85 Aligned_cols=314 Identities=22% Similarity=0.280 Sum_probs=266.3
Q ss_pred CCCcccceeeeeecCCCC-CccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC-CCCCCCcccccccEEEEEeCC
Q 018246 6 ETEHPQKAIGWAARDNTG-TFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGN 83 (359)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~ 83 (359)
.++...+++++..++.|. .++++..+.|+....+|+||.+|+.|||+|+..++|.|+ .++.|.+-|+|++|+|+.+|+
T Consensus 15 q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs 94 (354)
T KOG0025|consen 15 QMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGS 94 (354)
T ss_pred ccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecC
Confidence 355567889998888765 467889999998888899999999999999999999998 567899999999999999999
Q ss_pred CCCCCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCcccccc
Q 018246 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAP 163 (359)
Q Consensus 84 ~v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~ 163 (359)
++++|++||+|+... ...|+|++|.+.+++.++++++.++++.||+
T Consensus 95 ~vkgfk~Gd~VIp~~----------------------------------a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT 140 (354)
T KOG0025|consen 95 NVKGFKPGDWVIPLS----------------------------------ANLGTWRTEAVFSESDLIKVDKDIPLASAAT 140 (354)
T ss_pred CcCccCCCCeEeecC----------------------------------CCCccceeeEeecccceEEcCCcCChhhhhe
Confidence 999999999997443 2459999999999999999999999999999
Q ss_pred ccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHH---HHHcCCcEEecCCCH-
Q 018246 164 LLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEA---ISKLGADAFLVSSDP- 238 (359)
Q Consensus 164 l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~---~~~~g~~~v~~~~~~- 238 (359)
+..+.+|||.+|.+.-.+++||+|+-.|+ +.+|++.+|+|++.|.+.+-++|+....+++ ++.+|+++|+...+.
T Consensus 141 ~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~ 220 (354)
T KOG0025|consen 141 LSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELR 220 (354)
T ss_pred eccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhc
Confidence 99999999999999988899999888887 9999999999999999988888887655444 467999999854432
Q ss_pred --HHHHH--hcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCCC-CeeeCHHHHHhcCcEEEEeecCCH-------
Q 018246 239 --AKVKA--AMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-PLEVPIFALVGARRLVGGSNVGGM------- 306 (359)
Q Consensus 239 --~~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~------- 306 (359)
+..+. ...++.+.++|+|+.. .....+.|..||.++.+|..+. +.+++...+++|++.+.|+++..|
T Consensus 221 ~~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~p 299 (354)
T KOG0025|consen 221 DRKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSP 299 (354)
T ss_pred chhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCc
Confidence 11111 1237999999999988 7788999999999999998775 789999999999999999998665
Q ss_pred ----HHHHHHHHHHHhCCCcccE-EEEccccHHHHHHHHHcCCcc-EEEEEEcC
Q 018246 307 ----KETQEMLDFCAKHNIAADI-ELVRMDQINTAMERLAKSDVK-YRFVIDVG 354 (359)
Q Consensus 307 ----~~~~~~~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~-gkvvv~~~ 354 (359)
+.+.++.+++..|+|+.+. +..+|++...|++........ ||-++.++
T Consensus 300 e~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 300 EERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVLE 353 (354)
T ss_pred HHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence 2267888999999998665 889999999999877664433 56666543
No 61
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=2e-40 Score=305.32 Aligned_cols=321 Identities=25% Similarity=0.394 Sum_probs=266.4
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
|+++++...+ ...+++.+.+.|+++++||+||+.++++|++|++...+. ....+|.++|||++|+|+++|++++.+++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 78 (325)
T cd08264 1 MKALVFEKSG-IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKK 78 (325)
T ss_pred CeeEEeccCC-CCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCC
Confidence 5667665433 456788888888899999999999999999999887642 22234678999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGIT 170 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~t 170 (359)
||+|++.+.. .|+.|.+|..|..+.|.+..+. |....|+|++|++++++.++++|+++++++++.+++++.+
T Consensus 79 Gd~V~~~~~~-~~~~c~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~ 150 (325)
T cd08264 79 GDRVVVYNRV-FDGTCDMCLSGNEMLCRNGGII-------GVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALT 150 (325)
T ss_pred CCEEEECCCc-CCCCChhhcCCCccccCcccee-------eccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHH
Confidence 9999877655 8999999999999999976432 2235689999999999999999999999999999999999
Q ss_pred hhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH-HHHHHhcCCc
Q 018246 171 VYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDP-AKVKAAMGTM 248 (359)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~~~ 248 (359)
||+++.. ..+++|++|+|+|+ |++|++++++|++.|++|+++++ .+.+ +++|++++++.++. +.+.++.+++
T Consensus 151 a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~-~~~g~~~~~~~~~~~~~l~~~~~~~ 224 (325)
T cd08264 151 AYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWL-KEFGADEVVDYDEVEEKVKEITKMA 224 (325)
T ss_pred HHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHH-HHhCCCeeecchHHHHHHHHHhCCC
Confidence 9999876 66799999999997 99999999999999999988873 3555 78999888876542 3344444789
Q ss_pred cEEEECCCChhhHHHHHhccccCCEEEEecCCC-CCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcccEEE
Q 018246 249 DYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE-KPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADIEL 327 (359)
Q Consensus 249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~~~~ 327 (359)
|++++++|+.. +..++++|+++|+++.+|... ....++...++.++.++.++..+..++++++++++...++ ...+.
T Consensus 225 d~vl~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~ 302 (325)
T cd08264 225 DVVINSLGSSF-WDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLKV-KVWKT 302 (325)
T ss_pred CEEEECCCHHH-HHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCCc-eeEEE
Confidence 99999999864 899999999999999998642 2456677777788899999888888889999999964442 23388
Q ss_pred EccccHHHHHHHHHcCCccEEE
Q 018246 328 VRMDQINTAMERLAKSDVKYRF 349 (359)
Q Consensus 328 ~~l~~~~~a~~~~~~~~~~gkv 349 (359)
|+++++++|++.+.++...+|+
T Consensus 303 ~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 303 FKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred EcHHHHHHHHHHHHcCCCcccc
Confidence 9999999999999987766765
No 62
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=3.1e-40 Score=306.05 Aligned_cols=329 Identities=20% Similarity=0.319 Sum_probs=264.6
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCCCCCcccccccEEEEEeCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEW---GVTNYPIVPGHEIVGTVTKVGNNVSK 87 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~ 87 (359)
||++++. +.++.+++.+++.|.|+++||+||++++++|++|+.++.+.. ....+|.++|||++|+|+++|++++.
T Consensus 1 ~~~~~~~--~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~ 78 (341)
T PRK05396 1 MKALVKL--KAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTG 78 (341)
T ss_pred CceEEEe--cCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCc
Confidence 4666665 344679999999999999999999999999999998776531 12345778999999999999999999
Q ss_pred CCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccch
Q 018246 88 FKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCA 167 (359)
Q Consensus 88 ~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~ 167 (359)
+++||+|+..+.. .|+.|.+|+.+.+++|.+..+. +...+|+|++|+.+|.+.++++|+++++++++.+ ..
T Consensus 79 ~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~ 149 (341)
T PRK05396 79 FKVGDRVSGEGHI-VCGHCRNCRAGRRHLCRNTKGV-------GVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DP 149 (341)
T ss_pred CCCCCEEEECCCC-CCCCChhhhCcChhhCCCccee-------eecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hH
Confidence 9999999877555 8999999999999999764221 2335699999999999999999999999888744 45
Q ss_pred hhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHH
Q 018246 168 GITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDPA---KVKA 243 (359)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~ 243 (359)
+.++++++.. ...+|++|+|.|+|.+|++++++|++.|+ +|+++++++++.+.+ +++|+++++++++.+ .+..
T Consensus 150 ~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~ 226 (341)
T PRK05396 150 FGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELA-RKMGATRAVNVAKEDLRDVMAE 226 (341)
T ss_pred HHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHhCCcEEecCccccHHHHHHH
Confidence 5555555433 23689999999899999999999999999 688888888887766 889999998876543 3333
Q ss_pred hc--CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCC-HHHHHHHHHHHHhC-
Q 018246 244 AM--GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGG-MKETQEMLDFCAKH- 319 (359)
Q Consensus 244 ~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~-~~~~~~~~~~l~~g- 319 (359)
+. .++|++|||.|+...+...+++++++|+++.+|.......++...++.+++++.++.... ...+..+++++.++
T Consensus 227 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 306 (341)
T PRK05396 227 LGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSGL 306 (341)
T ss_pred hcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcCC
Confidence 43 379999999998777899999999999999998765545555677778888888765322 24466788888888
Q ss_pred CCcccE-EEEccccHHHHHHHHHcCCccEEEEEEcC
Q 018246 320 NIAADI-ELVRMDQINTAMERLAKSDVKYRFVIDVG 354 (359)
Q Consensus 320 ~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 354 (359)
++.+.+ +.++++++++||+.+.++. .||++++++
T Consensus 307 ~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 307 DLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred ChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 454444 8899999999999998876 799999764
No 63
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=6.3e-40 Score=303.44 Aligned_cols=333 Identities=25% Similarity=0.368 Sum_probs=280.9
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
|+++.+...+.+..+++.+.+.|.+.+++|+|++.++++|++|++.+.|..+ ...+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 5667665434556678878888888999999999999999999998887643 234577899999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhh
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGI 169 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ 169 (359)
+||+|++.+.. .|+.|.+|..+.++.|.+..+ .|....|+|++|++++.+.++++|+++++++++.+++.+.
T Consensus 81 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ 152 (342)
T cd08266 81 PGQRVVIYPGI-SCGRCEYCLAGRENLCAQYGI-------LGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFL 152 (342)
T ss_pred CCCEEEEcccc-ccccchhhccccccccccccc-------cccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHH
Confidence 99999877655 799999999999999987532 2334568999999999999999999999999999999999
Q ss_pred hhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH---HHhc
Q 018246 170 TVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKV---KAAM 245 (359)
Q Consensus 170 ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~---~~~~ 245 (359)
+||+++.....+.++++++|+|+ +.+|++++++++..|++|+++++++++.+.+ +.++.+.+++..+.+.. ....
T Consensus 153 ~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (342)
T cd08266 153 TAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KELGADYVIDYRKEDFVREVRELT 231 (342)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCeEEecCChHHHHHHHHHh
Confidence 99999887777789999999987 7999999999999999999999999998887 77888777776654332 2222
Q ss_pred --CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCC-CeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCc
Q 018246 246 --GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-PLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIA 322 (359)
Q Consensus 246 --~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~ 322 (359)
.++|++++++|... +...+++++++|+++.+|.... ...++....+.+++++.+.......++..++++++++.++
T Consensus 232 ~~~~~d~~i~~~g~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 310 (342)
T cd08266 232 GKRGVDVVVEHVGAAT-WEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLK 310 (342)
T ss_pred CCCCCcEEEECCcHHH-HHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCcc
Confidence 37999999999876 8899999999999999986653 2345555567789999998888888899999999999987
Q ss_pred ccE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 323 ADI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 323 ~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
+.. +.|+++++++|++.+.++...+|+++++
T Consensus 311 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 311 PVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred cceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 655 8899999999999999887789999863
No 64
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=5.2e-40 Score=307.44 Aligned_cols=337 Identities=27% Similarity=0.480 Sum_probs=278.4
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCC---
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSK--- 87 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~--- 87 (359)
|+++++... ...+++.+.+.|.+.++||+|++.++++|++|+....|.++. .+|.++|||++|+|+.+|+++++
T Consensus 1 ~~a~~~~~~--~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~ 77 (367)
T cd08263 1 MKAAVLKGP--NPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYG 77 (367)
T ss_pred CeeEEEecC--CCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCc
Confidence 566766543 245788889999999999999999999999999998887653 56789999999999999999988
Q ss_pred CCCCCEEEEeccccCCCCCccccCCCCCCCcccc-ccccc-ccCCC-------------CCCCCccceEEEeeCCceEEC
Q 018246 88 FKEGDKVGVGVLVASCQKCESCQQGLENYCPNMI-LTYNS-IDRDG-------------TKTYGGYSDLIVVDQHYVLRF 152 (359)
Q Consensus 88 ~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~-~~~~~-~~~~g-------------~~~~g~~a~~~~~~~~~~~~l 152 (359)
+++||+|+..+.. .|+.|.+|.-+..++|.++. |...+ ..+.| ....|+|++|+.++.+.++++
T Consensus 78 ~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (367)
T cd08263 78 LSVGDRVVGSFIM-PCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPL 156 (367)
T ss_pred CCCCCEEEEcCCC-CCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEEC
Confidence 9999999765433 89999999999999999864 21100 00111 023589999999999999999
Q ss_pred CCCCCccccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcE
Q 018246 153 PDNMPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISTSPKKESEAISKLGADA 231 (359)
Q Consensus 153 p~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~-V~~v~~~~~~~~~~~~~~g~~~ 231 (359)
|+++++++++.+++.+.|||+++.....+.++++|||+|+|++|++++++|+..|++ |+++++++++.+.+ +++|++.
T Consensus 157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~-~~~g~~~ 235 (367)
T cd08263 157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKA-KELGATH 235 (367)
T ss_pred CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCce
Confidence 999999999999999999999998888888999999998899999999999999997 98898888888877 7899999
Q ss_pred EecCCCHHH---HHHhc--CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCC--CeeeCHHHHHhcCcEEEEeecC
Q 018246 232 FLVSSDPAK---VKAAM--GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK--PLEVPIFALVGARRLVGGSNVG 304 (359)
Q Consensus 232 v~~~~~~~~---~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~~ 304 (359)
+++++..+. +.... .++|+++|++++...+..++++++++|+++.+|.... ...++...++.+++++.++...
T Consensus 236 v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
T cd08263 236 TVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA 315 (367)
T ss_pred EecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC
Confidence 998765432 33333 3799999999987348899999999999999986542 3456666666788888886543
Q ss_pred C-HHHHHHHHHHHHhCCCccc---EEEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 305 G-MKETQEMLDFCAKHNIAAD---IELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 305 ~-~~~~~~~~~~l~~g~i~~~---~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
. .+.++.++++++++.+++. .+.++++++.++++.+.++...||+||+
T Consensus 316 ~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 316 RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 3 3679999999999999763 3789999999999999998888999974
No 65
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=6.6e-40 Score=301.10 Aligned_cols=314 Identities=21% Similarity=0.345 Sum_probs=260.3
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
||++.+. +++++++.+++.|+++++||+||+.++++|++|+....|.++ .|.++|||++|+|+++|++ +++
T Consensus 1 ~~a~~~~---~~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~ 71 (319)
T cd08242 1 MKALVLD---GGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELV 71 (319)
T ss_pred CeeEEEe---CCCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCC
Confidence 4666665 345789999999999999999999999999999999887653 5778999999999999998 679
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCC-CCCCccceEEEeeCCceEECCCCCCccccccccchhh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGT-KTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGI 169 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ 169 (359)
||||...+.. .|+.|.+|..|.++.|.+.... +. ..+|+|++|++++.++++++|++++.++++.+ ....
T Consensus 72 G~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~ 142 (319)
T cd08242 72 GKRVVGEINI-ACGRCEYCRRGLYTHCPNRTVL-------GIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLA 142 (319)
T ss_pred CCeEEECCCc-CCCCChhhhCcCcccCCCCccc-------CccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHH
Confidence 9999766555 7999999999999999875322 11 23699999999999999999999999888754 4445
Q ss_pred hhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCcc
Q 018246 170 TVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMD 249 (359)
Q Consensus 170 ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d 249 (359)
++|..+ ....++++++|||+|+|.+|++++|+|+.+|++|+++++++++.+.+ +++|++.+++++.. .-..++|
T Consensus 143 ~~~~~~-~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~----~~~~~~d 216 (319)
T cd08242 143 AALEIL-EQVPITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLALA-RRLGVETVLPDEAE----SEGGGFD 216 (319)
T ss_pred HHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHcCCcEEeCcccc----ccCCCCC
Confidence 666655 45556899999999999999999999999999999999999998888 67999888876532 1123799
Q ss_pred EEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCC--cccE-E
Q 018246 250 YIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNI--AADI-E 326 (359)
Q Consensus 250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i--~~~~-~ 326 (359)
+++|++|+...+..++++++++|+++..+.......++...++.++.++.++.... +++++++++++++ .+.+ +
T Consensus 217 ~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~l~~~~~~~~ 293 (319)
T cd08242 217 VVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGP---FAPALRLLRKGLVDVDPLITA 293 (319)
T ss_pred EEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEeccc---HHHHHHHHHcCCCChhhceEE
Confidence 99999998666889999999999999877655556667777778999998876543 7889999999999 4444 8
Q ss_pred EEccccHHHHHHHHHcCCccEEEEEE
Q 018246 327 LVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 327 ~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
.|+++++++||+.+.++. .+|+|+.
T Consensus 294 ~~~l~~~~~a~~~~~~~~-~~k~vi~ 318 (319)
T cd08242 294 VYPLEEALEAFERAAEPG-ALKVLLR 318 (319)
T ss_pred EEeHHHHHHHHHHHhcCC-ceEEEeC
Confidence 999999999999998765 4899886
No 66
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=3.4e-40 Score=305.35 Aligned_cols=302 Identities=19% Similarity=0.195 Sum_probs=246.4
Q ss_pred cceeeeeecCCCCCccceeeec----CCCCCCeEEEEEeeeecchhhhhhhccCCCC-CCCCCcccccc--cEEEEEeCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSR----RETGADDVTIKILFCGICHSDLHCARNEWGV-TNYPIVPGHEI--VGTVTKVGN 83 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~--~G~V~~vG~ 83 (359)
++++.... .++++|++.+.+. |+|+++||||||+++++|+.|++.+.|.... ..+|.++|++. .|.+..+|+
T Consensus 8 ~~~~~~~~-~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~ 86 (338)
T cd08295 8 LKAYVTGF-PKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDS 86 (338)
T ss_pred EecCCCCC-CCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEec
Confidence 44555444 2466789988877 8899999999999999999999998885432 34577899754 566666888
Q ss_pred CCCCCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeC-CceEECC-CCCCcc-c
Q 018246 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQ-HYVLRFP-DNMPLD-A 160 (359)
Q Consensus 84 ~v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~-~~~~~lp-~~l~~~-~ 160 (359)
.++.|++||+|+. .|+|+||+++|+ ..++++| ++++++ +
T Consensus 87 ~v~~~~vGd~V~~--------------------------------------~g~~aey~~v~~~~~~~~lp~~~~~~~~~ 128 (338)
T cd08295 87 GNPDFKVGDLVWG--------------------------------------FTGWEEYSLIPRGQDLRKIDHTDVPLSYY 128 (338)
T ss_pred CCCCCCCCCEEEe--------------------------------------cCCceeEEEecchhceeecCCCCCCHHHH
Confidence 9999999999962 168999999999 7999995 678887 7
Q ss_pred cccccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH-cCCcEEecCCCH
Q 018246 161 GAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK-LGADAFLVSSDP 238 (359)
Q Consensus 161 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~-~g~~~v~~~~~~ 238 (359)
++++++++.|||+++.....+++|++|||+|+ |++|++++|+|+.+|++|+++++++++.+.+ ++ +|+++++++++.
T Consensus 129 aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~-~~~lGa~~vi~~~~~ 207 (338)
T cd08295 129 LGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLL-KNKLGFDDAFNYKEE 207 (338)
T ss_pred HHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHhcCCceeEEcCCc
Confidence 88999999999999988777899999999987 9999999999999999999999999998888 55 999999986532
Q ss_pred -H---HHHHhc-CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCCC-e-----eeCHHHHHhcCcEEEEeecCCH-
Q 018246 239 -A---KVKAAM-GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKP-L-----EVPIFALVGARRLVGGSNVGGM- 306 (359)
Q Consensus 239 -~---~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~k~~~i~g~~~~~~- 306 (359)
+ .+.+.. .++|+++|++|+.. +..++++++++|+++.+|..... . ..+...++.+++++.++.....
T Consensus 208 ~~~~~~i~~~~~~gvd~v~d~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 286 (338)
T cd08295 208 PDLDAALKRYFPNGIDIYFDNVGGKM-LDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYL 286 (338)
T ss_pred ccHHHHHHHhCCCCcEEEEECCCHHH-HHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhH
Confidence 2 233333 38999999999855 89999999999999999864421 1 1344566778888888665433
Q ss_pred ----HHHHHHHHHHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 307 ----KETQEMLDFCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 307 ----~~~~~~~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
..++++++++.++++++.. ..|+++++++|++.+.+++..||+|+++
T Consensus 287 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 287 HRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 2378889999999998766 6799999999999999988889999874
No 67
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=1.5e-39 Score=301.76 Aligned_cols=327 Identities=26% Similarity=0.386 Sum_probs=274.9
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
|+++.++ +++.+.+.+.+.|++.+++|+||++++++|++|+....|.++....|.++|+|++|+|+++|++++.+++
T Consensus 1 ~~~~~~~---~~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~ 77 (343)
T cd08235 1 MKAAVLH---GPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKV 77 (343)
T ss_pred CeEEEEe---cCCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCC
Confidence 4666654 3446888888999999999999999999999999998876643445678999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCc-----eEECCCCCCcccccccc
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHY-----VLRFPDNMPLDAGAPLL 165 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~-----~~~lp~~l~~~~aa~l~ 165 (359)
||+|+..+.. .|++|..|..|+.++|.+..+. |...+|+|++|++++.+. ++++|+++++++++.+
T Consensus 78 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~- 148 (343)
T cd08235 78 GDRVFVAPHV-PCGECHYCLRGNENMCPNYKKF-------GNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV- 148 (343)
T ss_pred CCEEEEccCC-CCCCChHHHCcCcccCCCccee-------ccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-
Confidence 9999876543 7889999999999999876432 233569999999999988 9999999999998766
Q ss_pred chhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHHH---H
Q 018246 166 CAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISTSPKKESEAISKLGADAFLVSSDPAK---V 241 (359)
Q Consensus 166 ~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~-V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~---~ 241 (359)
+.+.+||+++... .+++|++|||+|+|.+|++++++|++.|++ |+++++++++.+.+ +++|.++++++++.+. +
T Consensus 149 ~~~~~a~~~l~~~-~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~-~~~g~~~~~~~~~~~~~~~i 226 (343)
T cd08235 149 EPLACCINAQRKA-GIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFA-KKLGADYTIDAAEEDLVEKV 226 (343)
T ss_pred hHHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCcEEecCCccCHHHHH
Confidence 7888999999766 679999999998899999999999999998 99999999988888 7899999988876533 3
Q ss_pred HHhcC--CccEEEECCCChhhHHHHHhccccCCEEEEecCCCC--CeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHH
Q 018246 242 KAAMG--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK--PLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCA 317 (359)
Q Consensus 242 ~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~ 317 (359)
..... ++|+++|++++...+...+++++++|+++.+|.... ...++...+..+++++.++......+++.++++++
T Consensus 227 ~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 306 (343)
T cd08235 227 RELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIA 306 (343)
T ss_pred HHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHH
Confidence 33333 699999999976558899999999999999986543 24455566777889998887777788999999999
Q ss_pred hCCCcc--cE-EEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 318 KHNIAA--DI-ELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 318 ~g~i~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
++.+++ .. ..++++++.++++.+.+++ .||+|+.
T Consensus 307 ~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 307 SGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred cCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 999863 33 7899999999999999988 8999873
No 68
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=2.5e-39 Score=300.29 Aligned_cols=330 Identities=23% Similarity=0.326 Sum_probs=271.1
Q ss_pred cceeeeeecCCCCCccceeeecCCCC-CCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETG-ADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
|+++++. ++..+++++++.|.|. ++||+|++.++++|++|++...|.++ ..+|.++|+|++|+|+++|+++++++
T Consensus 1 ~~a~~~~---~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (344)
T cd08284 1 MKAVVFK---GPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLK 76 (344)
T ss_pred CeeEEEe---cCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccC
Confidence 4566654 3457899999999985 99999999999999999998888665 34477899999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCC--ceEECCCCCCccccccccch
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQH--YVLRFPDNMPLDAGAPLLCA 167 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~--~~~~lp~~l~~~~aa~l~~~ 167 (359)
+||+|++.+.. .|+.|.+|..+.++.|.+..+.. .. .....+|+|++|++++++ .++++|++++++++++++++
T Consensus 77 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~ 152 (344)
T cd08284 77 VGDRVVSPFTI-ACGECFYCRRGQSGRCAKGGLFG--YA-GSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDI 152 (344)
T ss_pred CCCEEEEcccC-CCCCChHHhCcCcccCCCCcccc--cc-ccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCc
Confidence 99999877654 89999999999999998753320 00 011246999999999975 99999999999999999999
Q ss_pred hhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCH---HHHHH
Q 018246 168 GITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDP---AKVKA 243 (359)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~ 243 (359)
+.|||+++.. ..+.+|++|||+|+|.+|++++++|+.+|+ +|+++++++++.+.+ +++|+.. ++.+.. ..+.+
T Consensus 153 ~~ta~~~~~~-~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~l~~ 229 (344)
T cd08284 153 LPTGYFGAKR-AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERA-AALGAEP-INFEDAEPVERVRE 229 (344)
T ss_pred hHHHHhhhHh-cCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH-HHhCCeE-EecCCcCHHHHHHH
Confidence 9999999976 456899999999999999999999999997 899998888887776 7899753 444432 23444
Q ss_pred hc--CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCC-CeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCC
Q 018246 244 AM--GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-PLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHN 320 (359)
Q Consensus 244 ~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~ 320 (359)
+. .++|+++|++++...+...+++++++|+++.+|.... .........+.+++++.+........++++++++.+++
T Consensus 230 ~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (344)
T cd08284 230 ATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGR 309 (344)
T ss_pred HhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCC
Confidence 44 3799999999986668999999999999999987652 34455666678888887665556678999999999999
Q ss_pred Ccc---cEEEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 321 IAA---DIELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 321 i~~---~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
+++ .++.+++++++++|+.+.+++. +|+|+.
T Consensus 310 i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 310 LDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred CChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 875 3488999999999999888777 999975
No 69
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1.6e-39 Score=301.32 Aligned_cols=317 Identities=23% Similarity=0.323 Sum_probs=256.5
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC-----------CCCCCCcccccccEEEE
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG-----------VTNYPIVPGHEIVGTVT 79 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-----------~~~~p~~~G~e~~G~V~ 79 (359)
||++++.. + .+++++++.|+++++||+|||.++++|++|++...|... ...+|.++|+|++|+|+
T Consensus 1 m~a~~~~~--~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~ 76 (341)
T cd08262 1 MRAAVFRD--G--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVV 76 (341)
T ss_pred CceEEEeC--C--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEE
Confidence 56666543 2 688889999999999999999999999999999877321 22357789999999999
Q ss_pred EeCCCCCC-CCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCc
Q 018246 80 KVGNNVSK-FKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPL 158 (359)
Q Consensus 80 ~vG~~v~~-~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~ 158 (359)
++|++++. +++||+|+..+.. .|+.|.+|..|... ..+|+|++|+++|.+.++++|+++++
T Consensus 77 ~vG~~v~~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~-----------------~~~g~~~~~~~v~~~~~~~lP~~~s~ 138 (341)
T cd08262 77 DYGPGTERKLKVGTRVTSLPLL-LCGQGASCGIGLSP-----------------EAPGGYAEYMLLSEALLLRVPDGLSM 138 (341)
T ss_pred EeCCCCcCCCCCCCEEEecCCc-CCCCChhhhCCCCc-----------------CCCCceeeeEEechHHeEECCCCCCH
Confidence 99999987 9999999877664 89999999432110 23589999999999999999999999
Q ss_pred cccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCC
Q 018246 159 DAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISTSPKKESEAISKLGADAFLVSSD 237 (359)
Q Consensus 159 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~-V~~v~~~~~~~~~~~~~~g~~~v~~~~~ 237 (359)
++++ ++.++.+||+++ ....+++|++|||+|+|.+|.+++|+|+.+|++ ++++++++++.+.+ +++|++++++++.
T Consensus 139 ~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~i~~~~ 215 (341)
T cd08262 139 EDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALA-LAMGADIVVDPAA 215 (341)
T ss_pred HHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHcCCcEEEcCCC
Confidence 9876 667888999985 556669999999999999999999999999995 66777788888777 8899998998765
Q ss_pred HHH------HHHhc--CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHH
Q 018246 238 PAK------VKAAM--GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKET 309 (359)
Q Consensus 238 ~~~------~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~ 309 (359)
.+. +.... .++|+++|++|+...+..++++++++|+++.+|...............+++++.++.....+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (341)
T cd08262 216 DSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEF 295 (341)
T ss_pred cCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHH
Confidence 321 12222 3799999999985448889999999999999987643333333333567888887766666789
Q ss_pred HHHHHHHHhCCCcc--c-EEEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 310 QEMLDFCAKHNIAA--D-IELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 310 ~~~~~~l~~g~i~~--~-~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
.+++++++++.+.+ . .+.+++++++++++.+.+++..||+|++
T Consensus 296 ~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 296 ADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred HHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 99999999999975 2 3889999999999999999888999974
No 70
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=8.3e-40 Score=307.60 Aligned_cols=317 Identities=24% Similarity=0.400 Sum_probs=260.1
Q ss_pred CccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCC------C-CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEE
Q 018246 24 TFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEW------G-VTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGV 96 (359)
Q Consensus 24 ~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~------~-~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v 96 (359)
.+++++++.|++++++|+||++++++|++|++.+.+.. + ...+|.++|||++|+|+++|++++.|++||+|++
T Consensus 38 ~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 117 (384)
T cd08265 38 ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA 117 (384)
T ss_pred CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence 48999999999999999999999999999998876321 1 1345789999999999999999999999999987
Q ss_pred eccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCC-------Cccccccccchhh
Q 018246 97 GVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNM-------PLDAGAPLLCAGI 169 (359)
Q Consensus 97 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l-------~~~~aa~l~~~~~ 169 (359)
.+.. +|+.|..|..|.++.|.++... |...+|+|++|+.++++.++++|+.+ +.+ ++++..++.
T Consensus 118 ~~~~-~~~~~~~c~~~~~~~~~~~~~~-------g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ 188 (384)
T cd08265 118 EEMM-WCGMCRACRSGSPNHCKNLKEL-------GFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTS 188 (384)
T ss_pred CCCC-CCCCChhhhCcCcccCCCccee-------eecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHH
Confidence 7654 9999999999999999976432 33346999999999999999999863 444 566777888
Q ss_pred hhhhHhHhc-CCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCH------HHH
Q 018246 170 TVYSPMKYY-GMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDP------AKV 241 (359)
Q Consensus 170 ta~~~l~~~-~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~------~~~ 241 (359)
+||+++... ..+++|++|||+|+|++|++++++|+..|+ +|+++++++++.+.+ +++|+++++++++. +.+
T Consensus 189 ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~~~~v 267 (384)
T cd08265 189 VAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLA-KEMGADYVFNPTKMRDCLSGEKV 267 (384)
T ss_pred HHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCCEEEcccccccccHHHHH
Confidence 999998665 677999999999999999999999999999 799999988887666 88999998887632 234
Q ss_pred HHhcC--CccEEEECCCCh-hhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecC-CHHHHHHHHHHHH
Q 018246 242 KAAMG--TMDYIIDTVSAV-HSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVG-GMKETQEMLDFCA 317 (359)
Q Consensus 242 ~~~~~--~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~-~~~~~~~~~~~l~ 317 (359)
.+++. ++|+|+|++|+. ..+..++++|+++|+++.+|.......++...+..+..++.++... ....+++++++++
T Consensus 268 ~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~ 347 (384)
T cd08265 268 MEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMA 347 (384)
T ss_pred HHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHH
Confidence 44443 799999999973 3478999999999999999876544555566667778888876542 2346899999999
Q ss_pred hCCCcc---cEEEEccccHHHHHHHHHcCCccEEEEE
Q 018246 318 KHNIAA---DIELVRMDQINTAMERLAKSDVKYRFVI 351 (359)
Q Consensus 318 ~g~i~~---~~~~~~l~~~~~a~~~~~~~~~~gkvvv 351 (359)
++.+++ .++.|+++++++||+.+.++ ..||+|+
T Consensus 348 ~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 348 SGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred cCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 999975 34889999999999996555 4688886
No 71
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.2e-39 Score=303.25 Aligned_cols=323 Identities=20% Similarity=0.310 Sum_probs=261.3
Q ss_pred cceeeeeecCCCCCcccee-eecCCCCCCeEEEEEeeeecchhhhhhhccCCC--------------------CCCCCCc
Q 018246 11 QKAIGWAARDNTGTFSPFH-FSRRETGADDVTIKILFCGICHSDLHCARNEWG--------------------VTNYPIV 69 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~--------------------~~~~p~~ 69 (359)
||++.+...+.+..+.+.+ .+.|.+.+++|+|||.++++|++|++.+.|.++ ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 5667666544444566543 467778999999999999999999998877543 2346789
Q ss_pred ccccccEEEEEeCCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCce
Q 018246 70 PGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYV 149 (359)
Q Consensus 70 ~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~ 149 (359)
+|||++|+|+++|+++++|++||||++.+.. .|+.|..|.. |..+ |...+|+|++|+.++.+.+
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~-----~~~~----------~~~~~g~~~~~~~v~~~~~ 144 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSI-RDPPEDDPAD-----IDYI----------GSERDGGFAEYTVVPAENA 144 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCc-CCCCcccccc-----cccc----------CCCCCccceEEEEecHHHc
Confidence 9999999999999999999999999766443 5666554321 1111 1223599999999999999
Q ss_pred EECCCCCCccccccccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC
Q 018246 150 LRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLG 228 (359)
Q Consensus 150 ~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g 228 (359)
+++|+++++++++++++++.|||+++ ....+++|++|||+|+ |++|++++++|+++|++|+++++++ +.+.+ +++|
T Consensus 145 ~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~-~~~g 221 (350)
T cd08274 145 YPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAV-RALG 221 (350)
T ss_pred eeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHH-HhcC
Confidence 99999999999999999999999998 4456699999999997 9999999999999999999888765 77777 7899
Q ss_pred CcEEecCCCHHHH-HHhc--CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCCC-eeeCHHHHHhcCcEEEEeecC
Q 018246 229 ADAFLVSSDPAKV-KAAM--GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKP-LEVPIFALVGARRLVGGSNVG 304 (359)
Q Consensus 229 ~~~v~~~~~~~~~-~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~~ 304 (359)
++.+++....... ...+ .++|++||++|+.. +..++++++++|+++.+|..... ..+++..++.+++++.++...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (350)
T cd08274 222 ADTVILRDAPLLADAKALGGEPVDVVADVVGGPL-FPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLG 300 (350)
T ss_pred CeEEEeCCCccHHHHHhhCCCCCcEEEecCCHHH-HHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecC
Confidence 8766655432211 2222 37999999999865 89999999999999999865443 567777778899999999888
Q ss_pred CHHHHHHHHHHHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 305 GMKETQEMLDFCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 305 ~~~~~~~~~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
....+.++++++.++++++.+ +.++++++++||+.+.++...||+|+.+
T Consensus 301 ~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 301 TREVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred CHHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 888899999999999997655 8899999999999999888789999863
No 72
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.6e-39 Score=300.35 Aligned_cols=327 Identities=21% Similarity=0.278 Sum_probs=268.6
Q ss_pred cceeeeeecCCCCCccceeeecCCC-CCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRET-GADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
||++.+. .++.+++.+.+.|.| +++||+||+.++++|++|++.+.|.++ ...|.++|||++|+|+++|++++.++
T Consensus 1 m~~~~~~---~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (345)
T cd08287 1 MRATVIH---GPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP-TRAPAPIGHEFVGVVEEVGSEVTSVK 76 (345)
T ss_pred CceeEEe---cCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC-CCCCcccccceEEEEEEeCCCCCccC
Confidence 5666665 344688999999986 899999999999999999999888765 34478999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCC--ceEECCCCCCccccc-----
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQH--YVLRFPDNMPLDAGA----- 162 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~--~~~~lp~~l~~~~aa----- 162 (359)
+||+|++. ....|+.|..|..|..+.|.+..+. +...+|+|++|+++|.+ .++++|++++++.+.
T Consensus 77 ~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~ 148 (345)
T cd08287 77 PGDFVIAP-FAISDGTCPFCRAGFTTSCVHGGFW-------GAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLL 148 (345)
T ss_pred CCCEEEec-cccCCCCChhhhCcCcccCCCCCcc-------cCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhH
Confidence 99999763 3347999999999999999875432 23467999999999975 899999999883221
Q ss_pred cccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHHH-
Q 018246 163 PLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISTSPKKESEAISKLGADAFLVSSDPAK- 240 (359)
Q Consensus 163 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~-V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~- 240 (359)
++...+.+||+++. ...+++|++|+|.|+|++|++++++|++.|++ ++++++++++.+.+ +++|++++++++..+.
T Consensus 149 ~l~~~~~~a~~~~~-~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~ga~~v~~~~~~~~~ 226 (345)
T cd08287 149 ALSDVMGTGHHAAV-SAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALA-REFGATDIVAERGEEAV 226 (345)
T ss_pred hhhcHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCCceEecCCcccHH
Confidence 23356788999886 44568999999999999999999999999995 88888888777666 8899999998876433
Q ss_pred --HHHhcC--CccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHH
Q 018246 241 --VKAAMG--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFC 316 (359)
Q Consensus 241 --~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l 316 (359)
+.++.. ++|+++|++|+...+..++++++++|+++.+|.......++....+.+++++.++.......++++++++
T Consensus 227 ~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (345)
T cd08287 227 ARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDV 306 (345)
T ss_pred HHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHH
Confidence 344443 7999999999876689999999999999999876544556665667899999987777678899999999
Q ss_pred HhCCCcc---cEEEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 317 AKHNIAA---DIELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 317 ~~g~i~~---~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
+++++++ ..+.++++++++|++.+.++.. .|++|+
T Consensus 307 ~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~ 344 (345)
T cd08287 307 LAGRINPGRVFDLTLPLDEVAEGYRAMDERRA-IKVLLR 344 (345)
T ss_pred HcCCCCHHHhEEeeecHHHHHHHHHHHhCCCc-eEEEeC
Confidence 9999975 3488999999999998887665 499985
No 73
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=2.7e-40 Score=297.82 Aligned_cols=262 Identities=23% Similarity=0.335 Sum_probs=220.0
Q ss_pred cccccccEEEEEeCCCCC------CCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEE
Q 018246 69 VPGHEIVGTVTKVGNNVS------KFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLI 142 (359)
Q Consensus 69 ~~G~e~~G~V~~vG~~v~------~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~ 142 (359)
++|||++|+|+++|++|+ ++++||||++.+.. .|+.|.+|+.|.++.|.++.+........+...+|+|+||+
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~ 79 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTV-PCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHC 79 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCC-CCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeE
Confidence 589999999999999999 89999999877654 79999999999999998864321100011223569999999
Q ss_pred EeeCC-ceEECCCCCCccccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCe-EEEEeCChhhH
Q 018246 143 VVDQH-YVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISTSPKKE 220 (359)
Q Consensus 143 ~~~~~-~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~-V~~v~~~~~~~ 220 (359)
++|++ +++++|+++++++++++.+...|||+++..... .+|++|||+|+|++|++++|+|+++|++ |++++++++|.
T Consensus 80 ~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~-~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 80 HLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGD-LKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRR 158 (280)
T ss_pred EecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 99997 699999999999999999999999999987766 6999999999999999999999999995 99998899998
Q ss_pred HHHHHHcCCcEEecCCCH-HHHHHhcC--CccEEEECCCChhhHHHHHhccccCCEEEEecCCC--CCeeeCHHHHHhcC
Q 018246 221 SEAISKLGADAFLVSSDP-AKVKAAMG--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE--KPLEVPIFALVGAR 295 (359)
Q Consensus 221 ~~~~~~~g~~~v~~~~~~-~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~k~ 295 (359)
+.+ +++|++++++.++. +.+.+++. ++|++||++|...+++.++++++++|+++.+|... ...+++...++.|+
T Consensus 159 ~~a-~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~ 237 (280)
T TIGR03366 159 ELA-LSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRW 237 (280)
T ss_pred HHH-HHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCC
Confidence 877 89999998886543 23444443 79999999998877899999999999999999653 35678888899999
Q ss_pred cEEEEeecCCHHHHHHHHHHHHhC--CCc--ccE-EEEccccH
Q 018246 296 RLVGGSNVGGMKETQEMLDFCAKH--NIA--ADI-ELVRMDQI 333 (359)
Q Consensus 296 ~~i~g~~~~~~~~~~~~~~~l~~g--~i~--~~~-~~~~l~~~ 333 (359)
+++.|+..++.++++++++++.++ ++. +.+ ++|||+++
T Consensus 238 ~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 238 LTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred cEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 999999988888999999999985 443 333 88999873
No 74
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=5.1e-39 Score=300.43 Aligned_cols=321 Identities=24% Similarity=0.395 Sum_probs=257.9
Q ss_pred CCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC---CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEe
Q 018246 21 NTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG---VTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVG 97 (359)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~ 97 (359)
.+..+++.+.+.|.++++||+||+.++++|++|++.+.|... ....|.++|||++|+|+++|++++.|++||+|++.
T Consensus 25 ~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 104 (364)
T PLN02702 25 GVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALE 104 (364)
T ss_pred cCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEc
Confidence 445688888888889999999999999999999998876321 12347789999999999999999999999999776
Q ss_pred ccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhhhhHhHh
Q 018246 98 VLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKY 177 (359)
Q Consensus 98 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~ 177 (359)
+.. .|++|..|+.|..+.|+++.+. . ....+|+|++|++++.+.++++|+++++++++.. .+..++++++ .
T Consensus 105 ~~~-~~~~c~~c~~g~~~~c~~~~~~-~-----~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~ 175 (364)
T PLN02702 105 PGI-SCWRCNLCKEGRYNLCPEMKFF-A-----TPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-R 175 (364)
T ss_pred CCC-CCCCCcchhCcCcccCCCcccc-C-----CCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-H
Confidence 654 8999999999999999875322 1 0123699999999999999999999999888752 2344477777 4
Q ss_pred cCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCC--CH---HHHHHh---c-CC
Q 018246 178 YGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSS--DP---AKVKAA---M-GT 247 (359)
Q Consensus 178 ~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~--~~---~~~~~~---~-~~ 247 (359)
...+.+|++|||+|+|++|++++++|+..|+ .|+++++++++.+.+ +++|++.++++. .. ..+..+ . ++
T Consensus 176 ~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (364)
T PLN02702 176 RANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVA-KQLGADEIVLVSTNIEDVESEVEEIQKAMGGG 254 (364)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCEEEecCcccccHHHHHHHHhhhcCCC
Confidence 4556899999999999999999999999999 577788888887766 889998877643 12 223222 2 37
Q ss_pred ccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCc--ccE
Q 018246 248 MDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIA--ADI 325 (359)
Q Consensus 248 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~--~~~ 325 (359)
+|+++|++|+...+..++++++++|+++.+|.......++...+..+++++.++... ..+++.++++++++++. +.+
T Consensus 255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~l~~~~~~ 333 (364)
T PLN02702 255 IDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRY-RNTWPLCLEFLRSGKIDVKPLI 333 (364)
T ss_pred CCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccC-hHHHHHHHHHHHcCCCCchHhe
Confidence 999999999766689999999999999999865444455666777899999987654 46789999999999885 333
Q ss_pred -EEEcc--ccHHHHHHHHHcCCccEEEEEE
Q 018246 326 -ELVRM--DQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 326 -~~~~l--~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
+.|++ +++++|++.+.+++..+|+|+.
T Consensus 334 ~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 334 THRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred EEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 77655 7999999999888878999985
No 75
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=8.5e-40 Score=300.88 Aligned_cols=304 Identities=20% Similarity=0.330 Sum_probs=255.5
Q ss_pred cceeeeeecCCC-CCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 018246 11 QKAIGWAARDNT-GTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGNNVSKF 88 (359)
Q Consensus 11 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 88 (359)
||++++..++++ ..+++.+++.|.++++||+|||.++++|++|++.+.|.++ ....|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 567776543333 3478899999999999999999999999999999888764 34457889999999999999999999
Q ss_pred CCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchh
Q 018246 89 KEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAG 168 (359)
Q Consensus 89 ~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~ 168 (359)
++||+|+..+ ..|+|++|+++++..++++|+++++++++.+++.+
T Consensus 81 ~~Gd~V~~~~-----------------------------------~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~ 125 (324)
T cd08292 81 QVGQRVAVAP-----------------------------------VHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMP 125 (324)
T ss_pred CCCCEEEecc-----------------------------------CCCcceeEEEEchHHeEECCCCCCHHHhhhccccH
Confidence 9999997542 24899999999999999999999999999999999
Q ss_pred hhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHh
Q 018246 169 ITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPA---KVKAA 244 (359)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~ 244 (359)
.|||+++.. ..+++|++|||+|+ |.+|++++++|+++|++|+++.+++++.+.+ +++|+++++++++.+ .+.++
T Consensus 126 ~ta~~~~~~-~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~ 203 (324)
T cd08292 126 LSALMLLDF-LGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL-RALGIGPVVSTEQPGWQDKVREA 203 (324)
T ss_pred HHHHHHHHh-hCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HhcCCCEEEcCCCchHHHHHHHH
Confidence 999998865 56689999999986 9999999999999999999999999888888 668999998877643 34444
Q ss_pred cC--CccEEEECCCChhhHHHHHhccccCCEEEEecCCCC-CeeeCHHHHHhcCcEEEEeecCC----------HHHHHH
Q 018246 245 MG--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-PLEVPIFALVGARRLVGGSNVGG----------MKETQE 311 (359)
Q Consensus 245 ~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~----------~~~~~~ 311 (359)
+. ++|+++|++|+.. +..++++++++|+++.+|.... ...++....+.++.++.++.... ...++.
T Consensus 204 ~~~~~~d~v~d~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (324)
T cd08292 204 AGGAPISVALDSVGGKL-AGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAE 282 (324)
T ss_pred hCCCCCcEEEECCCChh-HHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHH
Confidence 43 7999999999875 8899999999999999987532 34556666677999998877642 235788
Q ss_pred HHHHHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 312 MLDFCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 312 ~~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
+++++.++.+++.+ +.|+++++.+||+.+.++...+|++++
T Consensus 283 ~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 283 LLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 99999999998554 789999999999999888777999874
No 76
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=2.6e-39 Score=299.63 Aligned_cols=325 Identities=25% Similarity=0.393 Sum_probs=265.6
Q ss_pred CCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhc-cCCC--CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEe
Q 018246 21 NTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCAR-NEWG--VTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVG 97 (359)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~ 97 (359)
..+.+++.+.+.|.++++||+|||.++++|++|+..+. |.++ ....|.++|+|++|+|+++|++++.|++||+|++.
T Consensus 5 ~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~ 84 (339)
T cd08232 5 AAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVN 84 (339)
T ss_pred cCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEc
Confidence 45678899999999999999999999999999988763 3221 12346789999999999999999999999999766
Q ss_pred ccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhhhhHhHh
Q 018246 98 VLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKY 177 (359)
Q Consensus 98 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~ 177 (359)
+. +.|+.|.+|..|+.+.|.++.+..... . -...+|+|++|++++.+.++++|+++++++++. ..++.+||+++..
T Consensus 85 ~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~-~-~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~ 160 (339)
T cd08232 85 PS-RPCGTCDYCRAGRPNLCLNMRFLGSAM-R-FPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNR 160 (339)
T ss_pred cC-CcCCCChHHhCcCcccCccccceeecc-c-cCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHh
Confidence 44 489999999999999999864321100 0 012469999999999999999999999998865 5777899999988
Q ss_pred cCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhc---CCccEEEE
Q 018246 178 YGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAM---GTMDYIID 253 (359)
Q Consensus 178 ~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~---~~~d~vid 253 (359)
...+ ++++|||.|+|.+|++++++|+++|+ +|+++++++++.+.+ +++|.++++++++.+ +.... +++|+++|
T Consensus 161 ~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~-~~~g~~~vi~~~~~~-~~~~~~~~~~vd~vld 237 (339)
T cd08232 161 AGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVA-RAMGADETVNLARDP-LAAYAADKGDFDVVFE 237 (339)
T ss_pred cCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHcCCCEEEcCCchh-hhhhhccCCCccEEEE
Confidence 8886 99999999889999999999999999 899999888887755 889999999876543 22222 36999999
Q ss_pred CCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcc--cE-EEEcc
Q 018246 254 TVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAA--DI-ELVRM 330 (359)
Q Consensus 254 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~--~~-~~~~l 330 (359)
++++...+...+++|+++|+++.+|........+...++.+++++.+.... ...+++++++++++.+++ .+ ++|++
T Consensus 238 ~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 316 (339)
T cd08232 238 ASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRF-DDEFAEAVRLLAAGRIDVRPLITAVFPL 316 (339)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecC-HHHHHHHHHHHHcCCCCchhheeEEecH
Confidence 999765588999999999999999865434444555566788888877643 457889999999998863 23 78999
Q ss_pred ccHHHHHHHHHcCCccEEEEEEc
Q 018246 331 DQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 331 ~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
+++++|++.+.++...||+|+++
T Consensus 317 ~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 317 EEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHHHHhCCCceeEEEeC
Confidence 99999999999888789999864
No 77
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.9e-39 Score=298.25 Aligned_cols=320 Identities=25% Similarity=0.384 Sum_probs=263.1
Q ss_pred CCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccC-CC--CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEe
Q 018246 21 NTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNE-WG--VTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVG 97 (359)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~-~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~ 97 (359)
++..+++.+.+.|.+.++||+|||.++++|++|++.+.+. .+ ....|.++|+|++|+|+++|++++.+++||+|++.
T Consensus 6 ~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 85 (343)
T cd05285 6 GPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIE 85 (343)
T ss_pred cCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEc
Confidence 3356888889999999999999999999999999876422 11 12346789999999999999999999999999876
Q ss_pred ccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhhhhHhHh
Q 018246 98 VLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKY 177 (359)
Q Consensus 98 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~ 177 (359)
+.. +|++|++|+.|..++|+...+. . ....+|+|++|++++.+.++++|+++++++++.+ .++.+|++++ .
T Consensus 86 ~~~-~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~ 156 (343)
T cd05285 86 PGV-PCRTCEFCKSGRYNLCPDMRFA-A-----TPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-R 156 (343)
T ss_pred ccc-CCCCChhHhCcCcccCcCcccc-c-----cccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-H
Confidence 544 9999999999999999865331 1 1124599999999999999999999999998776 5778889887 5
Q ss_pred cCCCCCCCEEEEECCchHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHH------HHHHhcC--Cc
Q 018246 178 YGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISTSPKKESEAISKLGADAFLVSSDPA------KVKAAMG--TM 248 (359)
Q Consensus 178 ~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~-V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~------~~~~~~~--~~ 248 (359)
...+++|++|||.|+|.+|++++++|+++|++ |+++++++++.+.+ +++|++++++.++.+ .+.+... ++
T Consensus 157 ~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 235 (343)
T cd05285 157 RAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFA-KELGATHTVNVRTEDTPESAEKIAELLGGKGP 235 (343)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHcCCcEEeccccccchhHHHHHHHHhCCCCC
Confidence 56669999999998899999999999999997 99999898888877 789999998876533 2334443 69
Q ss_pred cEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCc--cc-E
Q 018246 249 DYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIA--AD-I 325 (359)
Q Consensus 249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~--~~-~ 325 (359)
|+++||+|+...+...+++++++|+++.+|.......+++..+..+++++.++.... ..+++++++++++.++ +. .
T Consensus 236 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~~~~ 314 (343)
T cd05285 236 DVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYA-NTYPTAIELLASGKVDVKPLIT 314 (343)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccCh-HHHHHHHHHHHcCCCCchHhEE
Confidence 999999998755889999999999999998655444556667777888888876543 6789999999999875 33 3
Q ss_pred EEEccccHHHHHHHHHcCC-ccEEEEE
Q 018246 326 ELVRMDQINTAMERLAKSD-VKYRFVI 351 (359)
Q Consensus 326 ~~~~l~~~~~a~~~~~~~~-~~gkvvv 351 (359)
+.|+++++.+|++.+.+++ ..+|+++
T Consensus 315 ~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 315 HRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred EEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 7899999999999999874 4599998
No 78
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=3e-39 Score=297.52 Aligned_cols=289 Identities=18% Similarity=0.217 Sum_probs=238.5
Q ss_pred ecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEe
Q 018246 18 ARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVG 97 (359)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~ 97 (359)
.+..++.+++.+.+.|+|++|||||||.++++|+.++. |.++....|.++|.|++|+|+++|+ .|++||||+..
T Consensus 12 ~~~~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~ 85 (325)
T TIGR02825 12 GYPTDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS 85 (325)
T ss_pred CCCCCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe
Confidence 33456778888999999999999999999999997653 3333233467999999999999874 59999999631
Q ss_pred ccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEEC----CCCCCcccc-ccccchhhhhh
Q 018246 98 VLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRF----PDNMPLDAG-APLLCAGITVY 172 (359)
Q Consensus 98 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~l----p~~l~~~~a-a~l~~~~~ta~ 172 (359)
++|++|++++.+.+.++ |++++++++ +++++++.|||
T Consensus 86 --------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~ 127 (325)
T TIGR02825 86 --------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAY 127 (325)
T ss_pred --------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHH
Confidence 46899999999988887 899999987 68999999999
Q ss_pred hHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH-H---HHHHhc-C
Q 018246 173 SPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDP-A---KVKAAM-G 246 (359)
Q Consensus 173 ~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~-~---~~~~~~-~ 246 (359)
+++.....+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+ +++|+++++++++. . .+.... +
T Consensus 128 ~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa~~vi~~~~~~~~~~~~~~~~~~ 206 (325)
T TIGR02825 128 FGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGFDVAFNYKTVKSLEETLKKASPD 206 (325)
T ss_pred HHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeccccccHHHHHHHhCCC
Confidence 99988888899999999985 9999999999999999999999999998888 88999999987653 1 233333 3
Q ss_pred CccEEEECCCChhhHHHHHhccccCCEEEEecCCCC-----Cee--eCHHHHHhcCcEEEEeecCC------HHHHHHHH
Q 018246 247 TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-----PLE--VPIFALVGARRLVGGSNVGG------MKETQEML 313 (359)
Q Consensus 247 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~--~~~~~~~~k~~~i~g~~~~~------~~~~~~~~ 313 (359)
++|++||++|+.. +..++++++++|+++.+|.... ..+ .....++.+++++.++.... .+.+++++
T Consensus 207 gvdvv~d~~G~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 285 (325)
T TIGR02825 207 GYDCYFDNVGGEF-SNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELL 285 (325)
T ss_pred CeEEEEECCCHHH-HHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHH
Confidence 7999999999876 7999999999999999986432 111 12345567888888876432 24588899
Q ss_pred HHHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 314 DFCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 314 ~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
+++++|++++.. ..|+++++++|++.+.+++..||+|++
T Consensus 286 ~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 286 KWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHCCCcccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 999999998766 789999999999999999888999974
No 79
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=9.6e-39 Score=296.33 Aligned_cols=326 Identities=26% Similarity=0.428 Sum_probs=268.6
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
|+++++.- .+.+.+++.+.|+++++||+||+.++++|++|+..+.|.+. ...|.++|+|++|+|+.+|++++.|++
T Consensus 1 ~~a~~~~~---~~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~ 76 (343)
T cd08236 1 MKALVLTG---PGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAV 76 (343)
T ss_pred CeeEEEec---CCceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCC
Confidence 56666653 34688888899999999999999999999999998877653 345678999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGIT 170 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~t 170 (359)
||+|+..+.. .|..|.+|..+.+..|++..+. |...+|+|++|+++|++.++++|+++++++++.+ ..+.+
T Consensus 77 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~t 147 (343)
T cd08236 77 GDRVAVNPLL-PCGKCEYCKKGEYSLCSNYDYI-------GSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAV 147 (343)
T ss_pred CCEEEEcCCC-CCCCChhHHCcChhhCCCcceE-------ecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHH
Confidence 9999776554 7899999999999999886322 3345699999999999999999999999998877 56789
Q ss_pred hhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHH--HHHHhcC-
Q 018246 171 VYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISTSPKKESEAISKLGADAFLVSSDPA--KVKAAMG- 246 (359)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~-V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~- 246 (359)
||+++. ...++++++|||+|+|.+|.+++++|+++|++ |+++++++++.+.+ +++|++.++++++.. .+.....
T Consensus 148 a~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~~~~ 225 (343)
T cd08236 148 ALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVA-RELGADDTINPKEEDVEKVRELTEG 225 (343)
T ss_pred HHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCCEEecCccccHHHHHHHhCC
Confidence 999987 45568999999998899999999999999996 99999998888877 789998888876543 2333333
Q ss_pred -CccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCe---eeCHHHHHhcCcEEEEeecCC-----HHHHHHHHHHHH
Q 018246 247 -TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPL---EVPIFALVGARRLVGGSNVGG-----MKETQEMLDFCA 317 (359)
Q Consensus 247 -~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~---~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~~l~ 317 (359)
++|+++||+|....+..++++|+++|+++.+|...... ..+...++.++.++.++.... .+.++++++++.
T Consensus 226 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (343)
T cd08236 226 RGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLA 305 (343)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHH
Confidence 59999999987666889999999999999998654332 223445567888988876644 466888999999
Q ss_pred hCCCc--ccE-EEEccccHHHHHHHHHc-CCccEEEEE
Q 018246 318 KHNIA--ADI-ELVRMDQINTAMERLAK-SDVKYRFVI 351 (359)
Q Consensus 318 ~g~i~--~~~-~~~~l~~~~~a~~~~~~-~~~~gkvvv 351 (359)
+++++ +.. ..+++++++++++.+.+ +...||+|+
T Consensus 306 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 306 SGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred cCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 99985 334 78999999999999998 566688874
No 80
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=7.6e-39 Score=297.23 Aligned_cols=294 Identities=15% Similarity=0.143 Sum_probs=229.7
Q ss_pred CCCccceeeecCCCC-CCeEEEEEeeeecchhhhhhhc---cCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEe
Q 018246 22 TGTFSPFHFSRRETG-ADDVTIKILFCGICHSDLHCAR---NEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVG 97 (359)
Q Consensus 22 ~~~~~~~~~~~~~~~-~~eVlV~v~~~~i~~~D~~~~~---g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~ 97 (359)
++.+++.+.+.|+|. ++||||||.++|||+.|+.... |......+|.++|||++|+|+++|+++++|++||||+..
T Consensus 20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 99 (345)
T cd08293 20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF 99 (345)
T ss_pred ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence 355788888999875 9999999999999999964332 111113457789999999999999999999999999631
Q ss_pred ccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccc----cccccchhhhhhh
Q 018246 98 VLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDA----GAPLLCAGITVYS 173 (359)
Q Consensus 98 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~----aa~l~~~~~ta~~ 173 (359)
.++|+||+++|++.++++|+++++++ +++++.++.|||+
T Consensus 100 -------------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~ 142 (345)
T cd08293 100 -------------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALI 142 (345)
T ss_pred -------------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHH
Confidence 15799999999999999999865433 4567788999999
Q ss_pred HhHhcCCCCCC--CEEEEECC-chHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHhc-
Q 018246 174 PMKYYGMTEPG--KHLGVAGL-GGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDPA---KVKAAM- 245 (359)
Q Consensus 174 ~l~~~~~~~~g--~~VlI~G~-g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~- 245 (359)
++.....+++| ++|||+|+ |++|++++|+|++.|+ +|+++++++++.+.+.+++|+++++++++.+ .+.+++
T Consensus 143 al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~ 222 (345)
T cd08293 143 GIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCP 222 (345)
T ss_pred HHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCC
Confidence 99877776776 99999987 9999999999999999 8999999999988885559999999886543 344444
Q ss_pred CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCC---Cee----eC--HHHH-HhcCcEEEEeecCC-----HHHHH
Q 018246 246 GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK---PLE----VP--IFAL-VGARRLVGGSNVGG-----MKETQ 310 (359)
Q Consensus 246 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~----~~--~~~~-~~k~~~i~g~~~~~-----~~~~~ 310 (359)
+++|++||++|+.. +..++++|+++|+++.+|.... ... +. ...+ ..+++++..+.... ...++
T Consensus 223 ~gvd~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (345)
T cd08293 223 EGVDVYFDNVGGEI-SDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIA 301 (345)
T ss_pred CCceEEEECCCcHH-HHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHH
Confidence 38999999999976 7899999999999999985321 111 11 1111 23444444332211 13367
Q ss_pred HHHHHHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 311 EMLDFCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 311 ~~~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
++++++.++++++.. ..++++++++||+.+.+++..||+|+++
T Consensus 302 ~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 302 QLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 788999999998765 5669999999999999988889999874
No 81
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.8e-38 Score=292.79 Aligned_cols=298 Identities=17% Similarity=0.174 Sum_probs=241.6
Q ss_pred ccceeeeee-c-CCC--CCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCC
Q 018246 10 PQKAIGWAA-R-DNT--GTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNV 85 (359)
Q Consensus 10 ~~~~~~~~~-~-~~~--~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v 85 (359)
.|+++.+.- + +.+ ..+++.+.+.|+|+++||+|||.++++|+.|.....+ ....|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence 477777766 2 333 6688999999999999999999999999988653211 124578999999999995 45
Q ss_pred CCCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCC---ceEECCCCCC--c--
Q 018246 86 SKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQH---YVLRFPDNMP--L-- 158 (359)
Q Consensus 86 ~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~---~~~~lp~~l~--~-- 158 (359)
+.|++||||+.. ++|++|++++.+ .++++|++++ +
T Consensus 76 ~~~~~Gd~V~~~--------------------------------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~ 117 (329)
T cd08294 76 SKFPVGTIVVAS--------------------------------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPP 117 (329)
T ss_pred CCCCCCCEEEee--------------------------------------CCeeeEEEECCccccceEECCccccccCCh
Confidence 679999999631 578999999999 9999999988 2
Q ss_pred -cccccccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCC
Q 018246 159 -DAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSS 236 (359)
Q Consensus 159 -~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~ 236 (359)
..+++++++++|||+++.....+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+ +++|++++++++
T Consensus 118 ~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l-~~~Ga~~vi~~~ 196 (329)
T cd08294 118 SLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL-KELGFDAVFNYK 196 (329)
T ss_pred HHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeCC
Confidence 2234688899999999988777799999999985 9999999999999999999999999998888 789999999887
Q ss_pred CHHH---HHHhc-CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCC--C-----eeeCHHHHHhcCcEEEEeecCC
Q 018246 237 DPAK---VKAAM-GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK--P-----LEVPIFALVGARRLVGGSNVGG 305 (359)
Q Consensus 237 ~~~~---~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~-----~~~~~~~~~~k~~~i~g~~~~~ 305 (359)
+.+. +.+.. +++|+++|++|+.. +..++++++++|+++.+|.... . .......++.+++++.++....
T Consensus 197 ~~~~~~~v~~~~~~gvd~vld~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 275 (329)
T cd08294 197 TVSLEEALKEAAPDGIDCYFDNVGGEF-SSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYR 275 (329)
T ss_pred CccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhh
Confidence 6533 33333 37999999999855 8999999999999999985321 1 1223445677888998876544
Q ss_pred H-----HHHHHHHHHHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 306 M-----KETQEMLDFCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 306 ~-----~~~~~~~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
+ ..+++++++++++++++.. ..|+++++++|++.+.+++..||+|+++
T Consensus 276 ~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 276 WQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred hHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 3 2367888999999998755 6799999999999999998889999864
No 82
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=8.5e-38 Score=289.72 Aligned_cols=327 Identities=21% Similarity=0.338 Sum_probs=259.7
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCCCCCcccccccEEEEEeCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEW---GVTNYPIVPGHEIVGTVTKVGNNVSK 87 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~ 87 (359)
||++++.. ....+++.+.+.|.++++|++||+.++++|++|+..+.+.. .....|.++|+|++|+|+.+|++++.
T Consensus 1 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~ 78 (341)
T cd05281 1 MKAIVKTK--AGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTR 78 (341)
T ss_pred CcceEEec--CCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCC
Confidence 45665553 33368889999999999999999999999999988765421 12334668999999999999999999
Q ss_pred CCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccch
Q 018246 88 FKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCA 167 (359)
Q Consensus 88 ~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~ 167 (359)
+++||+|+..+.. .|+.|.+|..+.+|+|... .+. |....|+|++|++++.+.++++|++++++.+ ++...
T Consensus 79 ~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~ 149 (341)
T cd05281 79 VKVGDYVSAETHI-VCGKCYQCRTGNYHVCQNT--KIL-----GVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEP 149 (341)
T ss_pred CCCCCEEEECCcc-CCCCChHHHCcCcccCccc--ceE-----eccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhH
Confidence 9999999877555 8999999999999999753 222 2235699999999999999999999998554 56666
Q ss_pred hhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHH--HHHh
Q 018246 168 GITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDPAK--VKAA 244 (359)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~--~~~~ 244 (359)
+.++++++. ...++|++|||.|+|.+|++++++|+..|+ +|+++++++++.+.+ +++|++++++++..+. +.++
T Consensus 150 ~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~ 226 (341)
T cd05281 150 LGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELA-KKMGADVVINPREEDVVEVKSV 226 (341)
T ss_pred HHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCcceeeCcccccHHHHHHH
Confidence 777887765 233789999999889999999999999999 799988888787766 7899988887654332 3333
Q ss_pred cC--CccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHH-HHHhcCcEEEEeecCC-HHHHHHHHHHHHhCC
Q 018246 245 MG--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIF-ALVGARRLVGGSNVGG-MKETQEMLDFCAKHN 320 (359)
Q Consensus 245 ~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~k~~~i~g~~~~~-~~~~~~~~~~l~~g~ 320 (359)
.. ++|++||++|+...+..++++|+++|+++.+|.......+++. .++.+++.+.++.... ...+..++++++++.
T Consensus 227 ~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 306 (341)
T cd05281 227 TDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGK 306 (341)
T ss_pred cCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCC
Confidence 33 7999999999876688999999999999999865443333332 3566788887765322 356788999999999
Q ss_pred Cc--ccE-EEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 321 IA--ADI-ELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 321 i~--~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
++ +.+ ..++++++++||+.+.+++ .||+|++
T Consensus 307 l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~ 340 (341)
T cd05281 307 VDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLY 340 (341)
T ss_pred CChhHheEEEecHHHHHHHHHHHhcCC-CceEEec
Confidence 85 333 7889999999999999988 8999986
No 83
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=2e-37 Score=286.40 Aligned_cols=324 Identities=25% Similarity=0.413 Sum_probs=268.2
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
||++.+. +++.+.+.+++.|++.++||+||++++++|++|+....|.++. .+|.++|+|++|+|+.+|++++.+++
T Consensus 1 ~~a~~~~---~~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~ 76 (334)
T cd08234 1 MKALVYE---GPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKV 76 (334)
T ss_pred CeeEEec---CCCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCC
Confidence 5666654 3446888999999999999999999999999999998887653 36789999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGIT 170 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~t 170 (359)
||+|+..+.. .|++|.+|..+.++.|..... .|...+|+|++|++++.+.++++|+++++.+++.+ ..+.+
T Consensus 77 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~ 147 (334)
T cd08234 77 GDRVAVDPNI-YCGECFYCRRGRPNLCENLTA-------VGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSC 147 (334)
T ss_pred CCEEEEcCCc-CCCCCccccCcChhhCCCcce-------eccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHH
Confidence 9999876554 699999999999999987631 12234699999999999999999999999998765 77788
Q ss_pred hhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHHHHH-Hhc--C
Q 018246 171 VYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISTSPKKESEAISKLGADAFLVSSDPAKVK-AAM--G 246 (359)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~-V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~-~~~--~ 246 (359)
+++++ ....+++|++|||+|+|.+|.+++++|++.|++ |+++++++++.+.+ +++|++.++++++.+... ... +
T Consensus 148 a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 225 (334)
T cd08234 148 AVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELA-KKLGATETVDPSREDPEAQKEDNPY 225 (334)
T ss_pred HHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCeEEecCCCCCHHHHHHhcCC
Confidence 89888 556669999999999899999999999999996 89999999988888 789988888776542211 222 3
Q ss_pred CccEEEECCCChhhHHHHHhccccCCEEEEecCCCC--CeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcc-
Q 018246 247 TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK--PLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAA- 323 (359)
Q Consensus 247 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~- 323 (359)
++|+++|+++....+...+++|+++|+++.+|.... ...++...++.+++++.+... ....+++++++++++++++
T Consensus 226 ~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~ 304 (334)
T cd08234 226 GFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFI-NPYTFPRAIALLESGKIDVK 304 (334)
T ss_pred CCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEecc-CHHHHHHHHHHHHcCCCChh
Confidence 799999999876668899999999999999986542 345555566668888888764 3567899999999999874
Q ss_pred --cEEEEccccHHHHHHHHHcCCccEEEEE
Q 018246 324 --DIELVRMDQINTAMERLAKSDVKYRFVI 351 (359)
Q Consensus 324 --~~~~~~l~~~~~a~~~~~~~~~~gkvvv 351 (359)
...++++++++++++.+.+ ...||+|+
T Consensus 305 ~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 305 GLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred hhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 2378999999999999998 66799986
No 84
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=8.1e-38 Score=285.36 Aligned_cols=298 Identities=28% Similarity=0.444 Sum_probs=248.8
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
||+++... ..+..+++++++.|.+.+++|+|||.++++|++|++...|.+.....|.++|+|++|+|+++|++++.+++
T Consensus 1 ~~~~~~~~-~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 79 (306)
T cd08258 1 MKALVKTG-PGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKV 79 (306)
T ss_pred CeeEEEec-CCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCC
Confidence 35555443 23456899999999999999999999999999999988876543445778999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGIT 170 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~t 170 (359)
||+|+..+..+.|+.|.+|..+..+.|+... .+ |...+|+|++|++++.+.++++|+++++++++ +...+.+
T Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~ 151 (306)
T cd08258 80 GDRVVSETTFSTCGRCPYCRRGDYNLCPHRK-GI------GTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAV 151 (306)
T ss_pred CCEEEEccCcCCCCCCcchhCcCcccCCCCc-ee------eecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHH
Confidence 9999888777799999999999999998642 11 22356999999999999999999999999876 7777889
Q ss_pred hhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeC--ChhhHHHHHHHcCCcEEecCCCHHH---HHHhc
Q 018246 171 VYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVIST--SPKKESEAISKLGADAFLVSSDPAK---VKAAM 245 (359)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~--~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~ 245 (359)
||+++.....++++++|||.|+|.+|.+++++|++.|++|+++.+ ++++.+.+ +++|++++ +++..+. +....
T Consensus 152 a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~~~l~~~~ 229 (306)
T cd08258 152 AVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVA-KELGADAV-NGGEEDLAELVNEIT 229 (306)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHH-HHhCCccc-CCCcCCHHHHHHHHc
Confidence 999998888889999999988899999999999999999888743 34455555 78999887 7655432 33333
Q ss_pred --CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCC-CeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhC
Q 018246 246 --GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-PLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKH 319 (359)
Q Consensus 246 --~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g 319 (359)
.++|+++|++|+...+...+++|+++|+++.+|.... ...++...++.|++++.|+.++++++++++++++++|
T Consensus 230 ~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 306 (306)
T cd08258 230 DGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG 306 (306)
T ss_pred CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhcC
Confidence 3799999999876668899999999999999988652 4566778888899999999999999999999999875
No 85
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=1.1e-37 Score=288.43 Aligned_cols=297 Identities=17% Similarity=0.267 Sum_probs=242.9
Q ss_pred CCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEecc
Q 018246 20 DNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVL 99 (359)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~ 99 (359)
+.++.+++.+++.|+++++||+|||+++++|++|+..+.|..+....|.++|+|++|+|+++|++++.|++||+|+....
T Consensus 12 ~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 91 (336)
T TIGR02817 12 TDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAGD 91 (336)
T ss_pred CCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcCC
Confidence 45677888899999999999999999999999999988876554556788999999999999999999999999974320
Q ss_pred ccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhhhhHhHhcC
Q 018246 100 VASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYG 179 (359)
Q Consensus 100 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~ 179 (359)
...+|+|++|++++++.++++|+++++++++.+++++.|||+++....
T Consensus 92 --------------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~ 139 (336)
T TIGR02817 92 --------------------------------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRL 139 (336)
T ss_pred --------------------------------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhc
Confidence 123589999999999999999999999999999999999999997777
Q ss_pred CCCC-----CCEEEEECC-chHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEEecCCCH--HHHHHhc-CCcc
Q 018246 180 MTEP-----GKHLGVAGL-GGLGHVAVKIGKAF-GLKVTVISTSPKKESEAISKLGADAFLVSSDP--AKVKAAM-GTMD 249 (359)
Q Consensus 180 ~~~~-----g~~VlI~G~-g~vG~~a~~la~~~-g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~-~~~d 249 (359)
.+++ |++|||+|+ |++|++++|+|+++ |++|+++++++++.+.+ +++|+++++++... ..+.+.. +++|
T Consensus 140 ~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~vd 218 (336)
T TIGR02817 140 GINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV-LELGAHHVIDHSKPLKAQLEKLGLEAVS 218 (336)
T ss_pred CCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH-HHcCCCEEEECCCCHHHHHHHhcCCCCC
Confidence 6666 999999986 99999999999998 99999999999998888 88999999885431 2333433 3799
Q ss_pred EEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecC--C----------HHHHHHHHHHHH
Q 018246 250 YIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVG--G----------MKETQEMLDFCA 317 (359)
Q Consensus 250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~--~----------~~~~~~~~~~l~ 317 (359)
+++|++++...+...+++++++|+++.++.. ..++...+..++.++.+.... . ...++++++++.
T Consensus 219 ~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 295 (336)
T TIGR02817 219 YVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVD 295 (336)
T ss_pred EEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHH
Confidence 9999987655588999999999999988532 234444455565666543322 0 134788999999
Q ss_pred hCCCcccE-EEE---ccccHHHHHHHHHcCCccEEEEEE
Q 018246 318 KHNIAADI-ELV---RMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 318 ~g~i~~~~-~~~---~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
++.+++.+ +.+ +++++++||+.+.+++..||++++
T Consensus 296 ~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 296 AGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred CCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 99998654 445 478999999999998888999875
No 86
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=2.8e-37 Score=286.13 Aligned_cols=320 Identities=21% Similarity=0.308 Sum_probs=256.7
Q ss_pred CCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEe
Q 018246 21 NTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEW---GVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVG 97 (359)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~ 97 (359)
+...+++.+.+.|.++++||+||+.++++|++|+.++.+.. ....+|.++|+|++|+|+++|++++.+++||+|+..
T Consensus 7 ~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 86 (340)
T TIGR00692 7 PGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVE 86 (340)
T ss_pred CCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEEC
Confidence 34457788889999999999999999999999998865541 122346689999999999999999999999999766
Q ss_pred ccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhhhhHhHh
Q 018246 98 VLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKY 177 (359)
Q Consensus 98 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~ 177 (359)
+.. .|..|..|..+.++.|+...+. |....|+|++|++++++.++++|++++++++ +++..+.+|++++
T Consensus 87 ~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~-- 155 (340)
T TIGR00692 87 THI-VCGKCYACRRGQYHVCQNTKIF-------GVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV-- 155 (340)
T ss_pred CcC-CCCCChhhhCcChhhCcCcceE-------eecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--
Confidence 544 8999999999999999986332 1224689999999999999999999998654 5677788888876
Q ss_pred cCCCCCCCEEEEECCchHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHhc--CCccEE
Q 018246 178 YGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISTSPKKESEAISKLGADAFLVSSDPA---KVKAAM--GTMDYI 251 (359)
Q Consensus 178 ~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~-V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~--~~~d~v 251 (359)
.....+|++|+|.|+|++|.+++++|+.+|++ |+++++++++.+.+ +++|++++++....+ .+.++. .++|++
T Consensus 156 ~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~v 234 (340)
T TIGR00692 156 LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELA-KKMGATYVVNPFKEDVVKEVADLTDGEGVDVF 234 (340)
T ss_pred HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCcEEEcccccCHHHHHHHhcCCCCCCEE
Confidence 33357899999988899999999999999996 88887777777766 789998888775532 333443 379999
Q ss_pred EECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHH-HHHhcCcEEEEeecC-CHHHHHHHHHHHHhCCCc--ccE-E
Q 018246 252 IDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIF-ALVGARRLVGGSNVG-GMKETQEMLDFCAKHNIA--ADI-E 326 (359)
Q Consensus 252 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~k~~~i~g~~~~-~~~~~~~~~~~l~~g~i~--~~~-~ 326 (359)
+|++++...+...+++|+++|+++.+|.......++.. .++.+++++.+.... ....+.++++++++++++ +.+ +
T Consensus 235 ld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 314 (340)
T TIGR00692 235 LEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITH 314 (340)
T ss_pred EECCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheee
Confidence 99999776688999999999999999875433333333 556678888765422 234578899999999986 434 8
Q ss_pred EEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 327 LVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 327 ~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
.++++++.++++.+.++.. ||+|+.+
T Consensus 315 ~~~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 315 KFKFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred eeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 9999999999999988764 9999864
No 87
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.5e-37 Score=284.72 Aligned_cols=327 Identities=23% Similarity=0.322 Sum_probs=271.5
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
||++++..++....+++.+.+.|.++++|++|++.++++|++|++...|.++ ....|.++|||++|+|+++|+.+++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 6788887655556788888888888999999999999999999999887654 234677899999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhh
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGI 169 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ 169 (359)
+||+|++.+.. . |+.+.+..|..+. ..|...+|+|++|+.++.+.++++|+++++.+++.+.+.+.
T Consensus 81 ~Gd~V~~~~~~-~------~~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ 146 (336)
T cd08276 81 VGDRVVPTFFP-N------WLDGPPTAEDEAS-------ALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGL 146 (336)
T ss_pred CCCEEEEeccc-c------ccccccccccccc-------ccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHH
Confidence 99999866432 2 3344444553321 11333569999999999999999999999999999999999
Q ss_pred hhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC-H---HHHHHhc
Q 018246 170 TVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSD-P---AKVKAAM 245 (359)
Q Consensus 170 ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~-~---~~~~~~~ 245 (359)
+||+++.....+++|++|+|+|+|++|++++++|++.|++|+++++++++.+.+ +++|.+.+++.+. . ..+.+..
T Consensus 147 ~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 225 (336)
T cd08276 147 TAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLERA-KALGADHVINYRTTPDWGEEVLKLT 225 (336)
T ss_pred HHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEcCCcccCHHHHHHHHc
Confidence 999999888788999999999889999999999999999999999999998888 6689998888654 3 2344444
Q ss_pred C--CccEEEECCCChhhHHHHHhccccCCEEEEecCCCC-CeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCc
Q 018246 246 G--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-PLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIA 322 (359)
Q Consensus 246 ~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~ 322 (359)
. ++|+++++++... +..++++++++|+++.+|.... ........++.+++++.+........+.++++++.++.+.
T Consensus 226 ~~~~~d~~i~~~~~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 304 (336)
T cd08276 226 GGRGVDHVVEVGGPGT-LAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIR 304 (336)
T ss_pred CCCCCcEEEECCChHH-HHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcc
Confidence 3 7999999998765 8899999999999999987543 2345666778899999998887778899999999999887
Q ss_pred ccE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 323 ADI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 323 ~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
+.. +.+++++++++|+.+.+++..+|+++.+
T Consensus 305 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 305 PVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred cccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 654 8899999999999999888889999863
No 88
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=1.5e-37 Score=288.08 Aligned_cols=307 Identities=21% Similarity=0.294 Sum_probs=253.8
Q ss_pred cceeeeeecCCC-CCccceeeecCCCCC-CeEEEEEeeeecchhhhhhhccCCCCC-C----CCCcccccccEEEEEeCC
Q 018246 11 QKAIGWAARDNT-GTFSPFHFSRRETGA-DDVTIKILFCGICHSDLHCARNEWGVT-N----YPIVPGHEIVGTVTKVGN 83 (359)
Q Consensus 11 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~eVlV~v~~~~i~~~D~~~~~g~~~~~-~----~p~~~G~e~~G~V~~vG~ 83 (359)
|+++.+...+.+ +.+.+.+.+.|.+.+ ++|+||+.++++|++|+..+.|..+.. . .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 677776654332 247888999998887 999999999999999999988865422 2 567899999999999999
Q ss_pred CCCCCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCcccccc
Q 018246 84 NVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAP 163 (359)
Q Consensus 84 ~v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~ 163 (359)
+++.+++||+|+.... ..|+|++|+.++.+.++++|+++++++++.
T Consensus 81 ~v~~~~~Gd~V~~~~~----------------------------------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~ 126 (341)
T cd08290 81 GVKSLKPGDWVIPLRP----------------------------------GLGTWRTHAVVPADDLIKVPNDVDPEQAAT 126 (341)
T ss_pred CCCCCCCCCEEEecCC----------------------------------CCccchheEeccHHHeEeCCCCCCHHHHHH
Confidence 9999999999975421 248999999999999999999999999999
Q ss_pred ccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCCh----hhHHHHHHHcCCcEEecCCCH
Q 018246 164 LLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSP----KKESEAISKLGADAFLVSSDP 238 (359)
Q Consensus 164 l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~----~~~~~~~~~~g~~~v~~~~~~ 238 (359)
+++.+.|||+++.....+++|++|||+|+ |++|++++++|++.|++|+++.+++ ++.+.+ +++|++++++++..
T Consensus 127 ~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~ 205 (341)
T cd08290 127 LSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERL-KALGADHVLTEEEL 205 (341)
T ss_pred hhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHH-HhcCCCEEEeCccc
Confidence 99999999999988777799999999986 9999999999999999999988776 566777 78999999887653
Q ss_pred ---H---HHHHhcC-CccEEEECCCChhhHHHHHhccccCCEEEEecCCCC-CeeeCHHHHHhcCcEEEEeecCCHH---
Q 018246 239 ---A---KVKAAMG-TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-PLEVPIFALVGARRLVGGSNVGGMK--- 307 (359)
Q Consensus 239 ---~---~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~~--- 307 (359)
+ .+..... ++|+++|++|+.. +..++++++++|+++.+|.... ...++...++.++.++.+.......
T Consensus 206 ~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (341)
T cd08290 206 RSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRA 284 (341)
T ss_pred ccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhc
Confidence 2 2333333 6999999999876 7788999999999999986432 3455665667899999987764321
Q ss_pred -------HHHHHHHHHHhCCCcccE-EEE---ccccHHHHHHHHHcCCccEEEEEEc
Q 018246 308 -------ETQEMLDFCAKHNIAADI-ELV---RMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 308 -------~~~~~~~~l~~g~i~~~~-~~~---~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
.+..+++++.++++.+.. ..+ ++++++++++.+.++...||+|+.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 285 NPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred CHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 378889999999997654 567 9999999999999888889999864
No 89
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=4.1e-37 Score=283.00 Aligned_cols=307 Identities=22% Similarity=0.257 Sum_probs=253.6
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG---VTNYPIVPGHEIVGTVTKVGNNVSK 87 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 87 (359)
|+++.+...+.+..+++.+.+.|.+.+++|+|++.++++|++|++...|..+ ....|.++|||++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 5677776544455677777777778999999999999999999998877643 2345678999999999999999999
Q ss_pred CCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccch
Q 018246 88 FKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCA 167 (359)
Q Consensus 88 ~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~ 167 (359)
+++||+|+.... ...|+|++|++++.+.++++|+++++++++.+++.
T Consensus 81 ~~~Gd~V~~~~~---------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~ 127 (324)
T cd08244 81 AWLGRRVVAHTG---------------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHD 127 (324)
T ss_pred CCCCCEEEEccC---------------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcch
Confidence 999999975421 12489999999999999999999999999999999
Q ss_pred hhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHH
Q 018246 168 GITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK---VKA 243 (359)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~ 243 (359)
+.||| ++.....++++++|+|+|+ |.+|++++++|++.|++|+++++++++.+.+ +++|++++++.++.+. +..
T Consensus 128 ~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~ 205 (324)
T cd08244 128 GRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALGADVAVDYTRPDWPDQVRE 205 (324)
T ss_pred HHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCEEEecCCccHHHHHHH
Confidence 99995 4555566799999999985 9999999999999999999999999998888 8899988888765433 333
Q ss_pred hcC--CccEEEECCCChhhHHHHHhccccCCEEEEecCCCC-CeeeCHHHHHhcCcEEEEeecCC------HHHHHHHHH
Q 018246 244 AMG--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-PLEVPIFALVGARRLVGGSNVGG------MKETQEMLD 314 (359)
Q Consensus 244 ~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~------~~~~~~~~~ 314 (359)
..+ ++|+++|++|+.. ...++++++++|+++.+|.... ...++....+.+++++.++.... .+.++++++
T Consensus 206 ~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (324)
T cd08244 206 ALGGGGVTVVLDGVGGAI-GRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALA 284 (324)
T ss_pred HcCCCCceEEEECCChHh-HHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHH
Confidence 333 7999999999876 7899999999999999987543 23455556678899988876543 245778899
Q ss_pred HHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 315 FCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 315 ~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
++.++++.+.+ ..|+++++++||+.+.++...||+++++
T Consensus 285 ~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 285 EAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred HHHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 99999987655 8899999999999999988889999863
No 90
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=1.1e-36 Score=280.17 Aligned_cols=310 Identities=23% Similarity=0.302 Sum_probs=247.9
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGV-TNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
||++++..++++..+++.+++.|.+++++|+|++.++++|++|+..+.|.++. ...|.++|||++|+|+++ +++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 67888776655557999999999999999999999999999999998887542 335778999999999999 456799
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhh
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGI 169 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ 169 (359)
+||+|+..+.. .|...+|+|++|+++|.+.++++|+++++++++.+++.+.
T Consensus 79 ~Gd~V~~~~~~-----------------------------~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ 129 (325)
T cd05280 79 EGDEVLVTGYD-----------------------------LGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGF 129 (325)
T ss_pred CCCEEEEcccc-----------------------------cCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHH
Confidence 99999754210 1223468999999999999999999999999999999999
Q ss_pred hhhhHhHhcCCC--C-CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH--HHHH
Q 018246 170 TVYSPMKYYGMT--E-PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPA--KVKA 243 (359)
Q Consensus 170 ta~~~l~~~~~~--~-~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~ 243 (359)
|||+++...... . .+++|+|+|+ |.+|++++++|+..|++|+++++++++.+.+ +++|++++++.++.. ....
T Consensus 130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~ 208 (325)
T cd05280 130 TAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL-KSLGASEVLDREDLLDESKKP 208 (325)
T ss_pred HHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEcchhHHHHHHHH
Confidence 999998765432 4 4579999997 9999999999999999999999999999888 789999988876532 1222
Q ss_pred hc-CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCC-CeeeCHHHHHhcCcEEEEeecCCH------HHHHHHHHH
Q 018246 244 AM-GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-PLEVPIFALVGARRLVGGSNVGGM------KETQEMLDF 315 (359)
Q Consensus 244 ~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~------~~~~~~~~~ 315 (359)
.. +++|+++|++++.. +..++++++++|+++.+|.... ...++...++.+++++.+...... ..++.+.++
T Consensus 209 ~~~~~~d~vi~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (325)
T cd05280 209 LLKARWAGAIDTVGGDV-LANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATE 287 (325)
T ss_pred hcCCCccEEEECCchHH-HHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHH
Confidence 22 37999999999865 9999999999999999987542 234555555578889888655322 223444555
Q ss_pred HHhCCCcccEEEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 316 CAKHNIAADIELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 316 l~~g~i~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
+..+...+...+|++++++++++.+.+++..||+|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 288 WKPDLLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred HhcCCccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 55664444558999999999999999998889999864
No 91
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=8.8e-37 Score=281.88 Aligned_cols=310 Identities=21% Similarity=0.304 Sum_probs=259.2
Q ss_pred ccceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 018246 10 PQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGNNVSKF 88 (359)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 88 (359)
|||++++...+....+++.+.+.|.+.++||+|||.++++|+.|+....|..+ ....|.++|+|++|+|+++|++++.+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 58898888665555677777777888999999999999999999998877653 23345689999999999999999999
Q ss_pred CCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchh
Q 018246 89 KEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAG 168 (359)
Q Consensus 89 ~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~ 168 (359)
++||+|+... .+|+|++|++++.+.++++|+++++++++.+.+++
T Consensus 81 ~~Gd~V~~~~-----------------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~ 125 (334)
T PTZ00354 81 KEGDRVMALL-----------------------------------PGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAF 125 (334)
T ss_pred CCCCEEEEec-----------------------------------CCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHH
Confidence 9999997432 24899999999999999999999999999999999
Q ss_pred hhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH----HHHH
Q 018246 169 ITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPA----KVKA 243 (359)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~----~~~~ 243 (359)
.+||+++.....+++|++|+|+|+ |.+|++++++|++.|++++++.+++++.+.+ +++|++++++....+ .+.+
T Consensus 126 ~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~ 204 (334)
T PTZ00354 126 LTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKLAAIILIRYPDEEGFAPKVKK 204 (334)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCChhHHHHHHHH
Confidence 999999988777799999999985 9999999999999999988899999998888 789999888876543 2333
Q ss_pred hc--CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCC-Cee-eCHHHHHhcCcEEEEeecCCH----------HHH
Q 018246 244 AM--GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-PLE-VPIFALVGARRLVGGSNVGGM----------KET 309 (359)
Q Consensus 244 ~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~-~~~~~~~~k~~~i~g~~~~~~----------~~~ 309 (359)
.. .++|++++++++.. +..++++++++|+++.+|...+ ... ++...++.++.++.++..... ..+
T Consensus 205 ~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (334)
T PTZ00354 205 LTGEKGVNLVLDCVGGSY-LSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFE 283 (334)
T ss_pred HhCCCCceEEEECCchHH-HHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHH
Confidence 33 37999999998765 8899999999999999986543 223 666667778888888765432 224
Q ss_pred HHHHHHHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEEcCCC
Q 018246 310 QEMLDFCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVIDVGNS 356 (359)
Q Consensus 310 ~~~~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~~ 356 (359)
+++++++.++.+.+.+ +.+++++++++++.+.+++..||+|+.+.++
T Consensus 284 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~~ 331 (334)
T PTZ00354 284 REVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNEP 331 (334)
T ss_pred HHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence 6788899999987655 8899999999999999887779999988765
No 92
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.2e-36 Score=277.54 Aligned_cols=296 Identities=22% Similarity=0.310 Sum_probs=247.9
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
||++.+...+ +..+++.+.+.|.++++||+||+.++++|++|++...+. ..+.++|+|++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~ 75 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAV 75 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCC
Confidence 4666665432 667888889999999999999999999999999876521 23568999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGIT 170 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~t 170 (359)
||+|+... .+|+|++|+.++.+.++++|+++++++++++++.+.|
T Consensus 76 Gd~V~~~~-----------------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~t 120 (305)
T cd08270 76 GARVVGLG-----------------------------------AMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVT 120 (305)
T ss_pred CCEEEEec-----------------------------------CCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHH
Confidence 99997432 2489999999999999999999999999999999999
Q ss_pred hhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCcc
Q 018246 171 VYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMD 249 (359)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d 249 (359)
||+++...... +|++|+|+|+ |++|++++++|++.|++|+++++++++.+.+ +++|++.+++.... + ..+++|
T Consensus 121 a~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~--~--~~~~~d 194 (305)
T cd08270 121 ALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGL-RELGAAEVVVGGSE--L--SGAPVD 194 (305)
T ss_pred HHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecccc--c--cCCCce
Confidence 99999888875 5999999987 9999999999999999999999999998888 67998765543221 1 114799
Q ss_pred EEEECCCChhhHHHHHhccccCCEEEEecCCCC-CeeeCHHHHHh--cCcEEEEeecCC----HHHHHHHHHHHHhCCCc
Q 018246 250 YIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-PLEVPIFALVG--ARRLVGGSNVGG----MKETQEMLDFCAKHNIA 322 (359)
Q Consensus 250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~--k~~~i~g~~~~~----~~~~~~~~~~l~~g~i~ 322 (359)
+++|++|+.. +..++++++++|+++.+|.... ...++...+.. ++.++.++.... ...++.+++++.+++++
T Consensus 195 ~vl~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 273 (305)
T cd08270 195 LVVDSVGGPQ-LARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLD 273 (305)
T ss_pred EEEECCCcHH-HHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCcc
Confidence 9999999875 8999999999999999986542 34455555554 688888877653 35688899999999998
Q ss_pred ccE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 323 ADI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 323 ~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
+.+ +.++++++++|++.+.++...||+|+.+
T Consensus 274 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 274 PRIGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred ceeccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 765 7999999999999999888889999864
No 93
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=5.3e-37 Score=282.75 Aligned_cols=306 Identities=22% Similarity=0.294 Sum_probs=251.1
Q ss_pred ccceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 10 PQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
+|+++.+..++.+..+++.+++.|.++++||+||+.++++|++|++...|.++...+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 47888888767777899999999999999999999999999999999888766555688899999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhh
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGI 169 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ 169 (359)
+||+|+... ...|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus 81 ~Gd~V~~~~----------------------------------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ 126 (327)
T PRK10754 81 VGDRVVYAQ----------------------------------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGL 126 (327)
T ss_pred CCCEEEECC----------------------------------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHH
Confidence 999996321 1248899999999999999999999999999999999
Q ss_pred hhhhHhHhcCCCCCCCEEEEEC-CchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHhc
Q 018246 170 TVYSPMKYYGMTEPGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPA---KVKAAM 245 (359)
Q Consensus 170 ta~~~l~~~~~~~~g~~VlI~G-~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~ 245 (359)
+||.++.....+++|++|+|+| +|.+|++++++|+.+|++|+++++++++.+.+ +++|++++++.+..+ .+.+.+
T Consensus 127 ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 205 (327)
T PRK10754 127 TVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KKAGAWQVINYREENIVERVKEIT 205 (327)
T ss_pred HHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCCCEEEcCCCCcHHHHHHHHc
Confidence 9999988888889999999997 59999999999999999999999999998888 789998888776532 334444
Q ss_pred C--CccEEEECCCChhhHHHHHhccccCCEEEEecCCCCC-eeeCHHHHHhcCcE------EEEeecCCHH----HHHHH
Q 018246 246 G--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKP-LEVPIFALVGARRL------VGGSNVGGMK----ETQEM 312 (359)
Q Consensus 246 ~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~------i~g~~~~~~~----~~~~~ 312 (359)
. ++|+++||+++.. ....+++++++|+++.+|..... ..++...+..++.. +.+. ..+.. .+..+
T Consensus 206 ~~~~~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 283 (327)
T PRK10754 206 GGKKVRVVYDSVGKDT-WEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGY-ITTREELTEASNEL 283 (327)
T ss_pred CCCCeEEEEECCcHHH-HHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecc-cCCHHHHHHHHHHH
Confidence 3 7999999999865 88899999999999999865432 22333333222211 1111 11222 24568
Q ss_pred HHHHHhCCCccc---EEEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 313 LDFCAKHNIAAD---IELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 313 ~~~l~~g~i~~~---~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
++++.++++++. ++.|++++++++++.+.++...+|+|+.
T Consensus 284 ~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 284 FSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred HHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 899999999753 3899999999999999988888999985
No 94
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=4.3e-36 Score=276.21 Aligned_cols=309 Identities=24% Similarity=0.322 Sum_probs=248.1
Q ss_pred ceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCC-CCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 12 KAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGV-TNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
|++++...+.+..+++++++.|.+++++|+||++++++|++|++.+.|.++. ...|.++|||++|+|+. ++++.|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 3445554455557889999999999999999999999999999988887532 34578899999999998 56778999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGIT 170 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~t 170 (359)
||+|++.+.. .|...+|+|++|+.+|.+.++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~~-----------------------------~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~t 129 (323)
T TIGR02823 79 GDEVIVTGYG-----------------------------LGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFT 129 (323)
T ss_pred CCEEEEccCC-----------------------------CCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHH
Confidence 9999754310 01224589999999999999999999999999999999999
Q ss_pred hhhHhHhcCC--CCCCC-EEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH-HHHhc
Q 018246 171 VYSPMKYYGM--TEPGK-HLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK-VKAAM 245 (359)
Q Consensus 171 a~~~l~~~~~--~~~g~-~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~~~~ 245 (359)
|+.++..... +.+|+ +|+|+|+ |.+|++++++|+++|++|+++++++++.+.+ +++|++++++.++.+. +....
T Consensus 130 a~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~ 208 (323)
T TIGR02823 130 AALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYL-KELGASEVIDREDLSPPGKPLE 208 (323)
T ss_pred HHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HhcCCcEEEccccHHHHHHHhc
Confidence 9888755432 58898 9999997 9999999999999999999998888888777 8899998888765432 33333
Q ss_pred -CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCC-CeeeCHHHHHhcCcEEEEeecCC--H----HHHHHHHHHHH
Q 018246 246 -GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-PLEVPIFALVGARRLVGGSNVGG--M----KETQEMLDFCA 317 (359)
Q Consensus 246 -~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~--~----~~~~~~~~~l~ 317 (359)
+++|+++|++|+.. +..++++++++|+++.+|.... ....+...++.+++++.+..... . ..+..+.+++.
T Consensus 209 ~~~~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (323)
T TIGR02823 209 KERWAGAVDTVGGHT-LANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLK 287 (323)
T ss_pred CCCceEEEECccHHH-HHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhh
Confidence 36999999999875 8899999999999999987643 33344455667899998865431 1 12455666777
Q ss_pred hCCCcccEEEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 318 KHNIAADIELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 318 ~g~i~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
++.+++..+.++++++++||+.+.+++..||+|+.+
T Consensus 288 ~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 288 PRNLESITREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred cCCCcCceeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 888776668999999999999999998889999864
No 95
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.1e-36 Score=277.61 Aligned_cols=297 Identities=23% Similarity=0.293 Sum_probs=232.7
Q ss_pred CCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCC----CCCCcccccc---cEEEEEeC-CCCCCCCCCC
Q 018246 21 NTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVT----NYPIVPGHEI---VGTVTKVG-NNVSKFKEGD 92 (359)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~----~~p~~~G~e~---~G~V~~vG-~~v~~~~vGd 92 (359)
.+.....++.+.|.|.+++++|++.++++|+.|+.+++|.+... .+|.+++.++ +|.+...| ..+..+..||
T Consensus 16 ~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~ 95 (347)
T KOG1198|consen 16 GGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGD 95 (347)
T ss_pred CcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeee
Confidence 33444567789999999999999999999999999999987633 3564444444 44455555 3334466666
Q ss_pred EEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhhh
Q 018246 93 KVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVY 172 (359)
Q Consensus 93 rV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~ 172 (359)
++.. ....|+|+||.++|+..++++|++++++++|+++.++.|||
T Consensus 96 ~~~~-----------------------------------~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~ 140 (347)
T KOG1198|consen 96 AVVA-----------------------------------FLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTAL 140 (347)
T ss_pred EEee-----------------------------------ccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHH
Confidence 6542 23569999999999999999999999999999999999999
Q ss_pred hHhHhcC------CCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhc
Q 018246 173 SPMKYYG------MTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAM 245 (359)
Q Consensus 173 ~~l~~~~------~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 245 (359)
.++.... .+++|++|||+|+ |++|++++|+|++.|+..+++.++++..+.+ +++|+++++|+++++.+++..
T Consensus 141 ~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~-k~lGAd~vvdy~~~~~~e~~k 219 (347)
T KOG1198|consen 141 SALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELV-KKLGADEVVDYKDENVVELIK 219 (347)
T ss_pred HHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHH-HHcCCcEeecCCCHHHHHHHH
Confidence 9999999 7899999999975 9999999999999998777777888888888 999999999999987766654
Q ss_pred C----CccEEEECCCChhhHHHHHhccccCCEEEEecCCCC---CeeeC-HHH-H--------HhcCc-EEEEeecCCHH
Q 018246 246 G----TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK---PLEVP-IFA-L--------VGARR-LVGGSNVGGMK 307 (359)
Q Consensus 246 ~----~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~~-~~~-~--------~~k~~-~i~g~~~~~~~ 307 (359)
. +||+|+||+|+.. ......++..+|+...++...+ ..... ... + ..++. -...+.....+
T Consensus 220 k~~~~~~DvVlD~vg~~~-~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (347)
T KOG1198|consen 220 KYTGKGVDVVLDCVGGST-LTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAE 298 (347)
T ss_pred hhcCCCccEEEECCCCCc-cccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHH
Confidence 3 8999999999975 7788888888886554443321 11111 000 0 01111 12233345557
Q ss_pred HHHHHHHHHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEEcC
Q 018246 308 ETQEMLDFCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVIDVG 354 (359)
Q Consensus 308 ~~~~~~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 354 (359)
.++.+.+++++++|++.+ +.||++++.+||+.+.++..+||+++.++
T Consensus 299 ~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 299 YLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred HHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 799999999999999988 89999999999999999999999999875
No 96
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=4.2e-36 Score=276.14 Aligned_cols=292 Identities=21% Similarity=0.297 Sum_probs=248.9
Q ss_pred CccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC-CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEeccccC
Q 018246 24 TFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVAS 102 (359)
Q Consensus 24 ~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~~~~ 102 (359)
.+++.+.+.|.+.+++|+|||+++++|+.|...+.|.+. ....|.++|+|++|+|+++|++++.+++||+|+..+
T Consensus 13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~---- 88 (323)
T cd05282 13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG---- 88 (323)
T ss_pred eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC----
Confidence 567777888889999999999999999999998877654 234577899999999999999999999999997543
Q ss_pred CCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhhhhHhHhcCCCC
Q 018246 103 CQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTE 182 (359)
Q Consensus 103 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~~~~ 182 (359)
.+|+|++|+.++.+.++++|+++++++++.+++...+||+++.....+.
T Consensus 89 -------------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~ 137 (323)
T cd05282 89 -------------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLP 137 (323)
T ss_pred -------------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCC
Confidence 1389999999999999999999999999999999999999998888789
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHhc--CCccEEEECCC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK---VKAAM--GTMDYIIDTVS 256 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~--~~~d~vid~~g 256 (359)
+|++|||+|+ |.+|++++++|+++|++|+++.+++++.+.+ +++|+++++++++.+. +.+.+ .++|+++|++|
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g 216 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVG 216 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-HhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCC
Confidence 9999999986 8999999999999999999999999998888 8899999998876433 33333 27999999999
Q ss_pred ChhhHHHHHhccccCCEEEEecCCCC-CeeeCHHHHHhcCcEEEEeecCCH----------HHHHHHHHHHHhCCCcccE
Q 018246 257 AVHSLAPLLGLLKVNGKLVTVGLPEK-PLEVPIFALVGARRLVGGSNVGGM----------KETQEMLDFCAKHNIAADI 325 (359)
Q Consensus 257 ~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~----------~~~~~~~~~l~~g~i~~~~ 325 (359)
+.. ....+++++++|+++.+|.... ...++...+..++.++.+.....+ ..++++++++.++++.+..
T Consensus 217 ~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 295 (323)
T cd05282 217 GES-ATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPV 295 (323)
T ss_pred CHH-HHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCc
Confidence 977 6788999999999999987544 345566665558999888776543 2477888999999987654
Q ss_pred -EEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 326 -ELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 326 -~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
+.|+++++++||+.+.++...||+|++
T Consensus 296 ~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 296 GAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred cceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 889999999999999988878999863
No 97
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.4e-35 Score=273.61 Aligned_cols=301 Identities=21% Similarity=0.312 Sum_probs=250.7
Q ss_pred cceeeeeecCC--CCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC-CCCCCCcccccccEEEEEeCCCCCC
Q 018246 11 QKAIGWAARDN--TGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGNNVSK 87 (359)
Q Consensus 11 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~ 87 (359)
|+++.+.-+++ ++.+++++++.|.+.++||+|||.++++|++|++...|.++ ...+|.++|+|++|+|+.+|++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~ 81 (329)
T cd08250 2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTD 81 (329)
T ss_pred ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCC
Confidence 78888777666 67789999999999999999999999999999998887654 2456889999999999999999999
Q ss_pred CCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccch
Q 018246 88 FKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCA 167 (359)
Q Consensus 88 ~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~ 167 (359)
+++||+|+... .|+|++|++++.+.++++|+. +.+++.++++
T Consensus 82 ~~~Gd~V~~~~------------------------------------~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~ 123 (329)
T cd08250 82 FKVGDAVATMS------------------------------------FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVS 123 (329)
T ss_pred CCCCCEEEEec------------------------------------CcceeEEEEechHHeEECCCC--cchhhhcccH
Confidence 99999997432 389999999999999999997 4567889999
Q ss_pred hhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHH
Q 018246 168 GITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPA---KVKA 243 (359)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~ 243 (359)
+.|||+++.....+.+|++|+|+|+ |.+|++++++|+..|++|+++++++++.+.+ +++|++.+++.++.+ .+..
T Consensus 124 ~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~ 202 (329)
T cd08250 124 GLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGCDRPINYKTEDLGEVLKK 202 (329)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCCceEEeCCCccHHHHHHH
Confidence 9999999988878899999999985 9999999999999999999999999888888 789998888765532 2322
Q ss_pred hc-CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCCC-----------eeeCHHHHHhcCcEEEEeecCCH-----
Q 018246 244 AM-GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKP-----------LEVPIFALVGARRLVGGSNVGGM----- 306 (359)
Q Consensus 244 ~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~~~~k~~~i~g~~~~~~----- 306 (359)
.. +++|+++|++|+.. +...+++++++|+++.+|..... ..++ ...+.++.++.++.....
T Consensus 203 ~~~~~vd~v~~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 280 (329)
T cd08250 203 EYPKGVDVVYESVGGEM-FDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAKLIP 280 (329)
T ss_pred hcCCCCeEEEECCcHHH-HHHHHHHhccCCeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHHHHH
Confidence 22 37999999999855 89999999999999999865421 1222 234678889988776432
Q ss_pred HHHHHHHHHHHhCCCcccE---EEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 307 KETQEMLDFCAKHNIAADI---ELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 307 ~~~~~~~~~l~~g~i~~~~---~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
..+..+++++.++.+++.. +.++++++++||+.+.++...||+|++
T Consensus 281 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 281 QHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 3478889999999987632 568999999999999988877899874
No 98
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=1.2e-35 Score=273.53 Aligned_cols=310 Identities=22% Similarity=0.306 Sum_probs=240.9
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCC-CCCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEW-GVTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
||++.+.-.+.+..+.+.+++.|.+.++||+||+.++++|++|.....+.. ....+|.++|||++|+|++.| ++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 567777655444568888999999999999999999999999987664321 123457889999999999954 57799
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhh
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGI 169 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ 169 (359)
+||+|++.+.. .|...+|+|++|+++|++.++++|+++++++++.+++.+.
T Consensus 79 ~Gd~V~~~~~~-----------------------------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ 129 (326)
T cd08289 79 PGDEVIVTSYD-----------------------------LGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGF 129 (326)
T ss_pred CCCEEEEcccc-----------------------------cCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHH
Confidence 99999754310 1223469999999999999999999999999999999999
Q ss_pred hhhhHhHhcC---CCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH--HHHHH
Q 018246 170 TVYSPMKYYG---MTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDP--AKVKA 243 (359)
Q Consensus 170 ta~~~l~~~~---~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~ 243 (359)
|||.++.... ...++++|||+|+ |.+|++++++|+++|++|+++++++++.+.+ +++|++++++.++. +.+..
T Consensus 130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~ 208 (326)
T cd08289 130 TAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKLGAKEVIPREELQEESIKP 208 (326)
T ss_pred HHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHcCCCEEEcchhHHHHHHHh
Confidence 9998875432 2345789999987 9999999999999999999999999999888 88999998887653 22333
Q ss_pred hc-CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCC-CeeeCHHHHHhcCcEEEEeecCC--HHHHHHHHHHHHh-
Q 018246 244 AM-GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-PLEVPIFALVGARRLVGGSNVGG--MKETQEMLDFCAK- 318 (359)
Q Consensus 244 ~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~--~~~~~~~~~~l~~- 318 (359)
+. +++|+++|++|+.. +...+++++++|+++.+|.... ..+++...++.+++++.+..... ......+++.+.+
T Consensus 209 ~~~~~~d~vld~~g~~~-~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (326)
T cd08289 209 LEKQRWAGAVDPVGGKT-LAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATD 287 (326)
T ss_pred hccCCcCEEEECCcHHH-HHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhh
Confidence 33 37999999999865 8999999999999999987543 33444566668899998875321 1223334333322
Q ss_pred ---CCCc-ccEEEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 319 ---HNIA-ADIELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 319 ---g~i~-~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
..+. ...++|+++++++||+.+.+++..||+|+++
T Consensus 288 ~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 288 LKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred cCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 2222 2358999999999999999998889999864
No 99
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.7e-35 Score=271.59 Aligned_cols=308 Identities=22% Similarity=0.299 Sum_probs=248.2
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
|+++.+...+.+..+++.+.+.|.+.++||+||++++++|++|+....|.++....|.++|||++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 4666665433344566777777788999999999999999999999888765555678899999999999995 57999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGIT 170 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~t 170 (359)
||+|+..... .+...+|+|++|+.++.+.++++|+++++++++.+++++.|
T Consensus 79 Gd~V~~~~~~-----------------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t 129 (320)
T cd08243 79 GQRVATAMGG-----------------------------MGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYT 129 (320)
T ss_pred CCEEEEecCC-----------------------------CCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHH
Confidence 9999754310 01124589999999999999999999999999999999999
Q ss_pred hhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC--HHHHHHhcCC
Q 018246 171 VYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSD--PAKVKAAMGT 247 (359)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~ 247 (359)
||+++.....+++|++|||+|+ |++|++++++|++.|++|+++++++++.+.+ +++|++++++... .+.+.+...+
T Consensus 130 a~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~~~~~ 208 (320)
T cd08243 130 AWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELGADEVVIDDGAIAEQLRAAPGG 208 (320)
T ss_pred HHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEecCccHHHHHHHhCCC
Confidence 9999988887899999999986 9999999999999999999999999998888 8899988875432 1234444348
Q ss_pred ccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCe---eeCHHHH--HhcCcEEEEeecCCH--HHHHHHHHHHHhCC
Q 018246 248 MDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPL---EVPIFAL--VGARRLVGGSNVGGM--KETQEMLDFCAKHN 320 (359)
Q Consensus 248 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~---~~~~~~~--~~k~~~i~g~~~~~~--~~~~~~~~~l~~g~ 320 (359)
+|+++|++++.. +...+++++++|+++.+|...... ....... +.+++++.++..... ..++.++++++++.
T Consensus 209 ~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (320)
T cd08243 209 FDKVLELVGTAT-LKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGH 287 (320)
T ss_pred ceEEEECCChHH-HHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCc
Confidence 999999999865 899999999999999998643221 1222222 257778777665432 35788999999999
Q ss_pred CcccE-EEEccccHHHHHHHHHcCCccEEEEE
Q 018246 321 IAADI-ELVRMDQINTAMERLAKSDVKYRFVI 351 (359)
Q Consensus 321 i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv 351 (359)
+++.. +.++++++++|++.+.++...||+|+
T Consensus 288 ~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 288 LDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred eecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 97644 88999999999999998887789886
No 100
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=1.2e-35 Score=254.27 Aligned_cols=291 Identities=19% Similarity=0.197 Sum_probs=238.1
Q ss_pred CCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCCCCCcccccccEEEEEeC--CCCCCCCCCCEEEE
Q 018246 22 TGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEW---GVTNYPIVPGHEIVGTVTKVG--NNVSKFKEGDKVGV 96 (359)
Q Consensus 22 ~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG--~~v~~~~vGdrV~v 96 (359)
+++|++++++.|+|++||||+|+.+.+++|. ++|.+ +....|+.+|-..+|.++... |...+|++||.|..
T Consensus 24 ~d~F~lee~~vp~p~~GqvLl~~~ylS~DPy----mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~ 99 (340)
T COG2130 24 PDDFRLEEVDVPEPGEGQVLLRTLYLSLDPY----MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVG 99 (340)
T ss_pred CCCceeEeccCCCCCcCceEEEEEEeccCHH----HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEe
Confidence 4679999999999999999999999999882 33433 233456777776655444433 56778999999963
Q ss_pred eccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccc--cccccchhhhhhhH
Q 018246 97 GVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDA--GAPLLCAGITVYSP 174 (359)
Q Consensus 97 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~--aa~l~~~~~ta~~~ 174 (359)
. .+|++|.+++.+.+.+++++.-+.. ...|..+..|||.+
T Consensus 100 ~--------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~g 141 (340)
T COG2130 100 V--------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFG 141 (340)
T ss_pred c--------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHH
Confidence 2 5799999999999999986543222 34888899999999
Q ss_pred hHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHh---c-CCcc
Q 018246 175 MKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAA---M-GTMD 249 (359)
Q Consensus 175 l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~-~~~d 249 (359)
|.+++..++|++|+|.|+ |++|..+.|+||..|+||+.++.++|+.+++.+.+|++.++|++..+..+.+ . .+.|
T Consensus 142 Ll~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GID 221 (340)
T COG2130 142 LLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGID 221 (340)
T ss_pred HHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeE
Confidence 999999999999999875 9999999999999999999999999999999777999999999987554444 3 3999
Q ss_pred EEEECCCChhhHHHHHhccccCCEEEEecCCCCC-------eeeCHHHHHhcCcEEEEeecCCH------HHHHHHHHHH
Q 018246 250 YIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKP-------LEVPIFALVGARRLVGGSNVGGM------KETQEMLDFC 316 (359)
Q Consensus 250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-------~~~~~~~~~~k~~~i~g~~~~~~------~~~~~~~~~l 316 (359)
+.||++|++. ++..+..|+..+|++.||..+.. .+-....++.+.+++.|+...+. +-++++.+++
T Consensus 222 vyfeNVGg~v-~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv 300 (340)
T COG2130 222 VYFENVGGEV-LDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWV 300 (340)
T ss_pred EEEEcCCchH-HHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHH
Confidence 9999999988 99999999999999999975531 11223445667899999877321 3378899999
Q ss_pred HhCCCcccEEE-EccccHHHHHHHHHcCCccEEEEEEcCC
Q 018246 317 AKHNIAADIEL-VRMDQINTAMERLAKSDVKYRFVIDVGN 355 (359)
Q Consensus 317 ~~g~i~~~~~~-~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 355 (359)
++|+|+..-++ -+||.+++||..|.+++++||.|+++.+
T Consensus 301 ~~GKi~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 301 KEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred HcCceeeEeeehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 99999876644 4799999999999999999999999864
No 101
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=2.6e-35 Score=272.51 Aligned_cols=307 Identities=19% Similarity=0.259 Sum_probs=249.8
Q ss_pred cceeeeeecCCCC---CccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCC
Q 018246 11 QKAIGWAARDNTG---TFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSK 87 (359)
Q Consensus 11 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 87 (359)
|++++++..+.+. .+++.+.+.|.+.+++|+|++.++++|++|++.+.|..+....|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 4677777654443 3666778888889999999999999999999988776554445778999999999999999999
Q ss_pred CCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccch
Q 018246 88 FKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCA 167 (359)
Q Consensus 88 ~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~ 167 (359)
+++||+|+..... ..+|+|++|+.++.++++++|+++++++++.+++.
T Consensus 81 ~~~Gd~V~~~~~~--------------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~ 128 (336)
T cd08252 81 FKVGDEVYYAGDI--------------------------------TRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLT 128 (336)
T ss_pred CCCCCEEEEcCCC--------------------------------CCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhH
Confidence 9999999743210 13589999999999999999999999999999999
Q ss_pred hhhhhhHhHhcCCCCC-----CCEEEEECC-chHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcEEecCCCH--
Q 018246 168 GITVYSPMKYYGMTEP-----GKHLGVAGL-GGLGHVAVKIGKAFG-LKVTVISTSPKKESEAISKLGADAFLVSSDP-- 238 (359)
Q Consensus 168 ~~ta~~~l~~~~~~~~-----g~~VlI~G~-g~vG~~a~~la~~~g-~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~-- 238 (359)
+.|||+++.....+.+ |++|+|+|+ |++|++++++|+.+| ++|+++++++++.+.+ +++|++++++.+..
T Consensus 129 ~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~ 207 (336)
T cd08252 129 SLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWV-KELGADHVINHHQDLA 207 (336)
T ss_pred HHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCcEEEeCCccHH
Confidence 9999999877666676 999999985 999999999999999 8999999999998888 78999999887641
Q ss_pred HHHHHhc-CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCC------------
Q 018246 239 AKVKAAM-GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGG------------ 305 (359)
Q Consensus 239 ~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~------------ 305 (359)
..+.... +++|+++|++++...+..++++++++|+++.+|... ..++...++.++.++.+.....
T Consensus 208 ~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (336)
T cd08252 208 EQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQ 285 (336)
T ss_pred HHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEEEEEeeccccccccchhhH
Confidence 2233333 379999999997655899999999999999998653 3444445556778877654322
Q ss_pred HHHHHHHHHHHHhCCCcccE----EEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 306 MKETQEMLDFCAKHNIAADI----ELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 306 ~~~~~~~~~~l~~g~i~~~~----~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
...+.++++++.++.+++.. +.++++++++|++.+.++...||++++
T Consensus 286 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 286 HEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred HHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 13377889999999998643 347999999999999998888999864
No 102
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=1.4e-35 Score=274.49 Aligned_cols=306 Identities=24% Similarity=0.316 Sum_probs=243.6
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
|+++++..++ ++.+++.+.+.|.++++||+|++.++++|++|+..+.+.. ....|.++|+|++|+|+.+|++++.+++
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 78 (339)
T cd08249 1 QKAAVLTGPG-GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKV 78 (339)
T ss_pred CceEEeccCC-CCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCC
Confidence 5677776544 5778999999999999999999999999999998876544 1234678999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGIT 170 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~t 170 (359)
||+|+..+.. .|+ +...+|+|++|++++.+.++++|+++++++++.+++.+.|
T Consensus 79 Gd~V~~~~~~-~~~--------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~t 131 (339)
T cd08249 79 GDRVAGFVHG-GNP--------------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVT 131 (339)
T ss_pred CCEEEEEecc-ccC--------------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHH
Confidence 9999865421 000 1224699999999999999999999999999999999999
Q ss_pred hhhHhHhcCCC----------CCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH
Q 018246 171 VYSPMKYYGMT----------EPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPA 239 (359)
Q Consensus 171 a~~~l~~~~~~----------~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~ 239 (359)
||+++.....+ .++++|||+|+ |.+|++++++|++.|++|+++. ++++.+.+ +++|++++++.++.+
T Consensus 132 a~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~-~~~g~~~v~~~~~~~ 209 (339)
T cd08249 132 AALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLV-KSLGADAVFDYHDPD 209 (339)
T ss_pred HHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHH-HhcCCCEEEECCCch
Confidence 99998776543 68999999996 9999999999999999999887 56788888 889999999876643
Q ss_pred H---HHHhc-CCccEEEECCCChhhHHHHHhcccc--CCEEEEecCCCCCeeeCHHHHHhcCcEEEE---eec-------
Q 018246 240 K---VKAAM-GTMDYIIDTVSAVHSLAPLLGLLKV--NGKLVTVGLPEKPLEVPIFALVGARRLVGG---SNV------- 303 (359)
Q Consensus 240 ~---~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g---~~~------- 303 (359)
. +.+.. +++|+++|++|+...+..+++++++ +|+++.+|.......+ ..+.++.. ...
T Consensus 210 ~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 283 (339)
T cd08249 210 VVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEP------RKGVKVKFVLGYTVFGEIPED 283 (339)
T ss_pred HHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccC------CCCceEEEEEeeeeccccccc
Confidence 3 33333 3799999999984458999999999 9999999876432111 11112111 111
Q ss_pred --CCHHHHHHHHHHHHhCCCcccE-EEEc--cccHHHHHHHHHcCC-ccEEEEEEc
Q 018246 304 --GGMKETQEMLDFCAKHNIAADI-ELVR--MDQINTAMERLAKSD-VKYRFVIDV 353 (359)
Q Consensus 304 --~~~~~~~~~~~~l~~g~i~~~~-~~~~--l~~~~~a~~~~~~~~-~~gkvvv~~ 353 (359)
.....++.++++++++++.+.. ..++ ++++++||+.+.+++ ..+|+|+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 284 REFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred ccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 1124477889999999997654 6777 999999999999988 889999875
No 103
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=9.8e-35 Score=265.75 Aligned_cols=291 Identities=22% Similarity=0.283 Sum_probs=238.2
Q ss_pred CCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhh-ccCCCC--CCCCCcccccccEEEEEeCCCCCCCCCCCEEEEe
Q 018246 21 NTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCA-RNEWGV--TNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVG 97 (359)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~-~g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~ 97 (359)
+++.+++.+++.|+++++||+||+.++++|++|+..+ .|.... +..|.++|+|++|+|+++|++++.+++||+|+..
T Consensus 3 ~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 82 (312)
T cd08269 3 GPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGL 82 (312)
T ss_pred CCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEe
Confidence 4456889999999999999999999999999999887 665421 2247789999999999999999999999999754
Q ss_pred ccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhhhhHhHh
Q 018246 98 VLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKY 177 (359)
Q Consensus 98 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~ 177 (359)
+ .|+|++|++++.+.++++|+++ ..++.+..++.++++++.
T Consensus 83 ~------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~- 123 (312)
T cd08269 83 S------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR- 123 (312)
T ss_pred c------------------------------------CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-
Confidence 2 3889999999999999999998 232222367788898887
Q ss_pred cCCCCCCCEEEEECCchHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCH---HHHHHhcC--CccEE
Q 018246 178 YGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISTSPKKESEAISKLGADAFLVSSDP---AKVKAAMG--TMDYI 251 (359)
Q Consensus 178 ~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~-V~~v~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~--~~d~v 251 (359)
...++++++|+|+|+|.+|.+++++|++.|++ |+++.+.+++.+.+ +++|++++++.+.. ..+.+... ++|++
T Consensus 124 ~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~v 202 (312)
T cd08269 124 RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALA-RELGATEVVTDDSEAIVERVRELTGGAGADVV 202 (312)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCceEecCCCcCHHHHHHHHcCCCCCCEE
Confidence 66678999999998899999999999999998 99999988888766 88999888876543 33444443 79999
Q ss_pred EECCCChhhHHHHHhccccCCEEEEecCCC-CCeeeCHHHHHhcCcEEEEeecCCH----HHHHHHHHHHHhCCCcc---
Q 018246 252 IDTVSAVHSLAPLLGLLKVNGKLVTVGLPE-KPLEVPIFALVGARRLVGGSNVGGM----KETQEMLDFCAKHNIAA--- 323 (359)
Q Consensus 252 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~k~~~i~g~~~~~~----~~~~~~~~~l~~g~i~~--- 323 (359)
+|++|+...+...+++|+++|+++.+|... ....+++..+..+++++.++..... +.+++++++++++.+++
T Consensus 203 ld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 282 (312)
T cd08269 203 IEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSL 282 (312)
T ss_pred EECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhh
Confidence 999987666889999999999999998654 2345566667778888877654332 57899999999999975
Q ss_pred cEEEEccccHHHHHHHHHcCCc-cEEEEE
Q 018246 324 DIELVRMDQINTAMERLAKSDV-KYRFVI 351 (359)
Q Consensus 324 ~~~~~~l~~~~~a~~~~~~~~~-~gkvvv 351 (359)
..+.+++++++++++.+.+++. .+|+++
T Consensus 283 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 283 LTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred eeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 3378999999999999998864 589886
No 104
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=2.4e-34 Score=264.64 Aligned_cols=310 Identities=21% Similarity=0.302 Sum_probs=248.2
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
||++++..+++++.+++++.+.|.|+++||+|++.++++|++|+....|.++ ...+|.++|||++|+|++ ++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 6777776555555788999999999999999999999999999998877653 133577899999999999 7778899
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhh
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGI 169 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ 169 (359)
+||+|+..... .+...+|+|++|++++.+.++++|+++++++++.+++.++
T Consensus 79 ~Gd~V~~~~~~-----------------------------~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ 129 (324)
T cd08288 79 PGDRVVLTGWG-----------------------------VGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGF 129 (324)
T ss_pred CCCEEEECCcc-----------------------------CCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHH
Confidence 99999754210 0112358999999999999999999999999999999999
Q ss_pred hhhhHhH---hcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH-HHHh
Q 018246 170 TVYSPMK---YYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK-VKAA 244 (359)
Q Consensus 170 ta~~~l~---~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~~~ 244 (359)
+|+.++. .....+++++|+|+|+ |++|++++++|+.+|++|++++.++++.+.+ +++|+++++++++... +..+
T Consensus 130 ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~ 208 (324)
T cd08288 130 TAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYL-RSLGASEIIDRAELSEPGRPL 208 (324)
T ss_pred HHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HhcCCCEEEEcchhhHhhhhh
Confidence 9887754 3444336789999997 9999999999999999999999999998888 8899999998765432 2333
Q ss_pred c-CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCC-CeeeCHHHHHhcCcEEEEeecCC------HHHHHHHHHHH
Q 018246 245 M-GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-PLEVPIFALVGARRLVGGSNVGG------MKETQEMLDFC 316 (359)
Q Consensus 245 ~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~------~~~~~~~~~~l 316 (359)
. +++|.++|++++.. +...+..++.+|+++.+|.... ...++...++.++.++.+..... ...++.+.+++
T Consensus 209 ~~~~~~~~~d~~~~~~-~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (324)
T cd08288 209 QKERWAGAVDTVGGHT-LANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDL 287 (324)
T ss_pred ccCcccEEEECCcHHH-HHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHH
Confidence 3 36899999999854 7788899999999999987532 22344555557899998864321 13466677788
Q ss_pred HhCCCcccEEEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 317 AKHNIAADIELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 317 ~~g~i~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
.++.+.+.++.++++++++||+.+.+++..||+++++
T Consensus 288 ~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 288 DPALLEALTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred hcCCccccceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 8888877668999999999999999999889999864
No 105
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.5e-34 Score=268.96 Aligned_cols=307 Identities=23% Similarity=0.278 Sum_probs=240.2
Q ss_pred cceeeeeecCCCC-CccceeeecCCC-CCCeEEEEEeeeecchhhhhhhccCCC---------------CCCCCCccccc
Q 018246 11 QKAIGWAARDNTG-TFSPFHFSRRET-GADDVTIKILFCGICHSDLHCARNEWG---------------VTNYPIVPGHE 73 (359)
Q Consensus 11 ~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~---------------~~~~p~~~G~e 73 (359)
||++++..++++. .+++++.+.|.| +++||+|+|+++++|++|+....|... ....|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 5677666544432 378888899989 499999999999999999998877421 23557899999
Q ss_pred ccEEEEEeCCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECC
Q 018246 74 IVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFP 153 (359)
Q Consensus 74 ~~G~V~~vG~~v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp 153 (359)
++|+|+.+|++++.+++||||+..+.. ...|+|++|++++++.++++|
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~--------------------------------~~~g~~~~~~~v~~~~~~~lp 128 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP--------------------------------WSQGTHAEYVVVPENEVSKKP 128 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC--------------------------------CCCccceeEEEecHHHeecCC
Confidence 999999999999999999999764311 134899999999999999999
Q ss_pred CCCCccccccccchhhhhhhHhHhcCCCCC----CCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC
Q 018246 154 DNMPLDAGAPLLCAGITVYSPMKYYGMTEP----GKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLG 228 (359)
Q Consensus 154 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~----g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g 228 (359)
+++++++++.+++.+.|||+++.....+.+ |++|+|+|+ |++|++++++|+++|++|+++.++ ++.+.+ +++|
T Consensus 129 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~-~~~g 206 (350)
T cd08248 129 KNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLV-KSLG 206 (350)
T ss_pred CCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHH-HHhC
Confidence 999999999999999999999988776554 999999985 999999999999999999888765 455555 8899
Q ss_pred CcEEecCCCHHHHHHhc--CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCC--C--eeeC----H--HHHHh---
Q 018246 229 ADAFLVSSDPAKVKAAM--GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK--P--LEVP----I--FALVG--- 293 (359)
Q Consensus 229 ~~~v~~~~~~~~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~--~~~~----~--~~~~~--- 293 (359)
.+++++..+.+...++. +++|+++|++|+.. +..++++++++|+++.+|.... . .... . ..+..
T Consensus 207 ~~~~~~~~~~~~~~~l~~~~~vd~vi~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (350)
T cd08248 207 ADDVIDYNNEDFEEELTERGKFDVILDTVGGDT-EKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNV 285 (350)
T ss_pred CceEEECCChhHHHHHHhcCCCCEEEECCChHH-HHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHH
Confidence 98888877654444443 37999999999875 8999999999999999985421 1 1110 0 01111
Q ss_pred ----cCcEE-EEeecCCHHHHHHHHHHHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 294 ----ARRLV-GGSNVGGMKETQEMLDFCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 294 ----k~~~i-~g~~~~~~~~~~~~~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
+...+ .+........+.++++++.++.+.+.. +.|++++++++|+.+.++...+|++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 286 KSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 11111 111223356789999999999987655 899999999999999988877898863
No 106
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=2.4e-34 Score=263.96 Aligned_cols=311 Identities=22% Similarity=0.309 Sum_probs=254.7
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
|+++++..++.+..+++.+++.|.+.+++|+|++.++++|++|+....|.++ ....|.++|||++|+|+++|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 4667766555556688889999999999999999999999999998877654 345678899999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhh
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGI 169 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ 169 (359)
+||+|+..+.. + ....|++++|+.++.+.++++|+++++++++.+++++.
T Consensus 81 ~Gd~v~~~~~~-----------------------~-------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ 130 (325)
T cd08253 81 VGDRVWLTNLG-----------------------W-------GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPAL 130 (325)
T ss_pred CCCEEEEeccc-----------------------c-------CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHH
Confidence 99999755310 0 01348999999999999999999999999999999999
Q ss_pred hhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHhc
Q 018246 170 TVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK---VKAAM 245 (359)
Q Consensus 170 ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~ 245 (359)
+||+++.....+.+|++|+|+|+ |.+|+++++++++.|++|+++++++++.+.+ +++|++++++....+. +....
T Consensus 131 ~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 209 (325)
T cd08253 131 TAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQAGADAVFNYRAEDLADRILAAT 209 (325)
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeCCCcCHHHHHHHHc
Confidence 99999988777799999999986 9999999999999999999999999998888 7899988887765433 33333
Q ss_pred --CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCH------HHHHHHHHHHH
Q 018246 246 --GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGM------KETQEMLDFCA 317 (359)
Q Consensus 246 --~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~------~~~~~~~~~l~ 317 (359)
+++|++++++++.. +...+++++++|+++.+|.......++...++.++.++.+...+.. ..++.+.+++.
T Consensus 210 ~~~~~d~vi~~~~~~~-~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (325)
T cd08253 210 AGQGVDVIIEVLANVN-LAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLA 288 (325)
T ss_pred CCCceEEEEECCchHH-HHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHH
Confidence 37999999999876 7888999999999999987543344555555677888877654322 22555667778
Q ss_pred hCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 318 KHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 318 ~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
++.+++.. +.+++++++++++.+.++...||+++++
T Consensus 289 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 289 DGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred CCCccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 88887654 7899999999999999888889999864
No 107
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=3.2e-34 Score=262.81 Aligned_cols=304 Identities=24% Similarity=0.329 Sum_probs=252.9
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
||++++...+.+..+++.+.+.|.+.+++|+||+.++++|++|+....|.++ ....|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 5777776555566778878777888999999999999999999998877653 234577899999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhh
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGI 169 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ 169 (359)
+||+|+... .+|+|++|+.++.+.++++|+++++++++.++..+.
T Consensus 81 ~Gd~V~~~~-----------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~ 125 (323)
T cd05276 81 VGDRVCALL-----------------------------------AGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFF 125 (323)
T ss_pred CCCEEEEec-----------------------------------CCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHH
Confidence 999997432 248999999999999999999999999999999999
Q ss_pred hhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHhc
Q 018246 170 TVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK---VKAAM 245 (359)
Q Consensus 170 ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~ 245 (359)
++|+++.....+.++++|+|+|+ |++|++++++++..|++|+++++++++.+.+ +++|++.+++....+. +.+..
T Consensus 126 ~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 204 (323)
T cd05276 126 TAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALGADVAINYRTEDFAEEVKEAT 204 (323)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEeCCchhHHHHHHHHh
Confidence 99999888777799999999986 9999999999999999999999999988888 7899888887765432 33333
Q ss_pred --CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCC-CeeeCHHHHHhcCcEEEEeecCCH----------HHHHHH
Q 018246 246 --GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-PLEVPIFALVGARRLVGGSNVGGM----------KETQEM 312 (359)
Q Consensus 246 --~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~----------~~~~~~ 312 (359)
+++|+++++.|+.. +...+++++++|+++.+|.... ...++...++.+++++.++..... ..+.++
T Consensus 205 ~~~~~d~vi~~~g~~~-~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (323)
T cd05276 205 GGRGVDVILDMVGGDY-LARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHV 283 (323)
T ss_pred CCCCeEEEEECCchHH-HHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHH
Confidence 37999999999877 8889999999999999986542 234555666678999988765432 125677
Q ss_pred HHHHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEE
Q 018246 313 LDFCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVI 351 (359)
Q Consensus 313 ~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv 351 (359)
++++.++++++.. +.|++++++++++.+.++...||+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 284 WPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 8888899887654 88999999999999998877788874
No 108
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=4.8e-34 Score=255.52 Aligned_cols=265 Identities=31% Similarity=0.493 Sum_probs=225.1
Q ss_pred eEEEEEeeeecchhhhhhhccCCC-CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCC
Q 018246 39 DVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYC 117 (359)
Q Consensus 39 eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~ 117 (359)
||+|+|.++++|++|++.+.|..+ ....|.++|+|++|+|+++|++++.|++||+|+..+.. .|+.|.+|+. .|
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~----~~ 75 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNL-GCGTCELCRE----LC 75 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCC-CCCCCHHHHh----hC
Confidence 689999999999999999988764 34557889999999999999999999999999877654 8999999997 67
Q ss_pred cccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHH
Q 018246 118 PNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGH 197 (359)
Q Consensus 118 ~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~ 197 (359)
.+..+. +....|+|++|+.++.+.++++|+++++++++.+++++.+||+++.....+.++++|||+|+|++|+
T Consensus 76 ~~~~~~-------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~ 148 (271)
T cd05188 76 PGGGIL-------GEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGL 148 (271)
T ss_pred CCCCEe-------ccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHH
Confidence 766443 3345699999999999999999999999999999999999999999988888999999999866999
Q ss_pred HHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHh----cCCccEEEECCCChhhHHHHHhccccCCE
Q 018246 198 VAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAA----MGTMDYIIDTVSAVHSLAPLLGLLKVNGK 273 (359)
Q Consensus 198 ~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~----~~~~d~vid~~g~~~~~~~~~~~l~~~G~ 273 (359)
+++++++..|.+|+++++++++.+.+ +++|.+++++..+.+....+ .+++|++++++++...+..++++++++|+
T Consensus 149 ~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~ 227 (271)
T cd05188 149 LAAQLAKAAGARVIVTDRSDEKLELA-KELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGR 227 (271)
T ss_pred HHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCE
Confidence 99999999999999999999888888 78898888877654332222 23799999999984448899999999999
Q ss_pred EEEecCCCCCeee-CHHHHHhcCcEEEEeecCCHHHHHHHHHHH
Q 018246 274 LVTVGLPEKPLEV-PIFALVGARRLVGGSNVGGMKETQEMLDFC 316 (359)
Q Consensus 274 ~v~~g~~~~~~~~-~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l 316 (359)
++.+|........ .....+.+++++.++..+.+.+++++++++
T Consensus 228 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (271)
T cd05188 228 IVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDLL 271 (271)
T ss_pred EEEEccCCCCCCcccHHHHHhcceEEEEeecCCHHHHHHHHhhC
Confidence 9999876543222 355667899999999999888899888763
No 109
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=2.4e-33 Score=256.64 Aligned_cols=294 Identities=22% Similarity=0.310 Sum_probs=242.6
Q ss_pred CCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEeccc
Q 018246 21 NTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLV 100 (359)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~~ 100 (359)
.+..+.+.+.+.+.+.+++|+|+|.++++|++|++...|.++. .+|.++|||++|+|+.+|++++.+++||+|+...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~-- 86 (320)
T cd05286 10 GPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG-- 86 (320)
T ss_pred CccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCCCEEEEec--
Confidence 3445666666667789999999999999999999988776542 4577899999999999999999999999997432
Q ss_pred cCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhhhhHhHhcCC
Q 018246 101 ASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGM 180 (359)
Q Consensus 101 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~~ 180 (359)
..|+|++|+.++.+.++++|++++.++++.+.+...++|+++.....
T Consensus 87 ---------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~ 133 (320)
T cd05286 87 ---------------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYP 133 (320)
T ss_pred ---------------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcC
Confidence 13899999999999999999999999999999999999999988777
Q ss_pred CCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEC
Q 018246 181 TEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPA---KVKAAMG--TMDYIIDT 254 (359)
Q Consensus 181 ~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~--~~d~vid~ 254 (359)
+.+|++|+|+|+ |++|++++++|+.+|++|+++++++++.+.+ +++|++++++..+.+ .+..... ++|++++|
T Consensus 134 ~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~ 212 (320)
T cd05286 134 VKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAAGADHVINYRDEDFVERVREITGGRGVDVVYDG 212 (320)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEEC
Confidence 899999999995 9999999999999999999999999998888 789998888776543 2333332 79999999
Q ss_pred CCChhhHHHHHhccccCCEEEEecCCCCC-eeeCHHHHHhcCcEEEEeecC----CH----HHHHHHHHHHHhCCCcccE
Q 018246 255 VSAVHSLAPLLGLLKVNGKLVTVGLPEKP-LEVPIFALVGARRLVGGSNVG----GM----KETQEMLDFCAKHNIAADI 325 (359)
Q Consensus 255 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~~----~~----~~~~~~~~~l~~g~i~~~~ 325 (359)
+++.. +..++++++++|+++.+|..... ..++...+..+++++.+.... .. ..+.++++++.++.+.+..
T Consensus 213 ~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 291 (320)
T cd05286 213 VGKDT-FEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEI 291 (320)
T ss_pred CCcHh-HHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcc
Confidence 99865 88999999999999999865432 234454544788888654321 11 2256688888899887655
Q ss_pred -EEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 326 -ELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 326 -~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
+.|++++++++|+.+.++...+|++++
T Consensus 292 ~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 319 (320)
T cd05286 292 GKRYPLADAAQAHRDLESRKTTGKLLLI 319 (320)
T ss_pred cceEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 789999999999999988888999985
No 110
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=1.1e-33 Score=260.86 Aligned_cols=289 Identities=21% Similarity=0.232 Sum_probs=234.9
Q ss_pred CCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC---CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEe
Q 018246 21 NTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG---VTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVG 97 (359)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~ 97 (359)
.++.+++.+.+.|.+.+++|+||+.++++|++|.....+... ....+.++|+|++|+|+++|++ .+++||||+.
T Consensus 16 ~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~- 92 (329)
T cd05288 16 PPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSG- 92 (329)
T ss_pred CccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEec-
Confidence 456788888999999999999999999999988765554321 1122457899999999999964 7999999962
Q ss_pred ccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeC-CceEECCCCCC--cccccc-ccchhhhhhh
Q 018246 98 VLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQ-HYVLRFPDNMP--LDAGAP-LLCAGITVYS 173 (359)
Q Consensus 98 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~-~~~~~lp~~l~--~~~aa~-l~~~~~ta~~ 173 (359)
.++|++|+.++. +.++++|++++ +.++++ +++++.|||+
T Consensus 93 -------------------------------------~~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~ 135 (329)
T cd05288 93 -------------------------------------FLGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYF 135 (329)
T ss_pred -------------------------------------ccceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHH
Confidence 157999999999 99999999985 445545 8999999999
Q ss_pred HhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH-cCCcEEecCCCHHH---HHHhc-CC
Q 018246 174 PMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK-LGADAFLVSSDPAK---VKAAM-GT 247 (359)
Q Consensus 174 ~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~-~g~~~v~~~~~~~~---~~~~~-~~ 247 (359)
++.....+.++++|||+|+ |++|++++++|++.|++|+++++++++.+.+ ++ +|++++++.++.+. +.+.. ++
T Consensus 136 ~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~v~~~~~~~ 214 (329)
T cd05288 136 GLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWL-VEELGFDAAINYKTPDLAEALKEAAPDG 214 (329)
T ss_pred HHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhhcCCceEEecCChhHHHHHHHhccCC
Confidence 9988777799999999985 9999999999999999999999999998888 55 99999888776433 23333 47
Q ss_pred ccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCe------eeCHHHHHhcCcEEEEeecCCH-----HHHHHHHHHH
Q 018246 248 MDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPL------EVPIFALVGARRLVGGSNVGGM-----KETQEMLDFC 316 (359)
Q Consensus 248 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~k~~~i~g~~~~~~-----~~~~~~~~~l 316 (359)
+|+++|++|+.. +..++++++++|+++.+|...... .++....+.++.++.++..... ..+.++++++
T Consensus 215 ~d~vi~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (329)
T cd05288 215 IDVYFDNVGGEI-LDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWL 293 (329)
T ss_pred ceEEEEcchHHH-HHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHH
Confidence 999999999865 899999999999999998654321 1335556778899988776543 3478889999
Q ss_pred HhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEE
Q 018246 317 AKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVI 351 (359)
Q Consensus 317 ~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv 351 (359)
.++.+++.. ..+++++++++++.+.+++..||+++
T Consensus 294 ~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 294 AEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HCCCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence 999997644 67899999999999998887788874
No 111
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.3e-33 Score=260.46 Aligned_cols=301 Identities=21% Similarity=0.314 Sum_probs=241.8
Q ss_pred ceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCC-CCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 12 KAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGV-TNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
|++.+...+.+.++++.+.+.|.|.+++|+|++.++++|++|+.++.|..+. ..+|.++|||++|+|+.+|++++.|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 4566666556677889999999999999999999999999999998876542 346778999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGIT 170 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~t 170 (359)
||+|+..+ ..|+|++|+.++.+.++++|+++++++++.+++++.+
T Consensus 82 Gd~V~~~~-----------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~t 126 (331)
T cd08273 82 GDRVAALT-----------------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVT 126 (331)
T ss_pred CCEEEEeC-----------------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHH
Confidence 99997543 1388999999999999999999999999999999999
Q ss_pred hhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHH-Hhc-CC
Q 018246 171 VYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVK-AAM-GT 247 (359)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~-~~~-~~ 247 (359)
||+++.....+.+|++|+|+|+ |.+|++++++|+..|++|+++++ +++.+.+ +++|+..+ +.+..+... ... ++
T Consensus 127 a~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~-~~~g~~~~-~~~~~~~~~~~~~~~~ 203 (331)
T cd08273 127 AYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAAL-RELGATPI-DYRTKDWLPAMLTPGG 203 (331)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHH-HHcCCeEE-cCCCcchhhhhccCCC
Confidence 9999988777799999999986 99999999999999999999987 7777777 78997543 333322211 222 47
Q ss_pred ccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCee--eCH--------------HHHHhcCcEEEEeecC-------
Q 018246 248 MDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLE--VPI--------------FALVGARRLVGGSNVG------- 304 (359)
Q Consensus 248 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~--------------~~~~~k~~~i~g~~~~------- 304 (359)
+|++++++++.. +..++++++++|+++.+|....... ... ...+.+..++......
T Consensus 204 ~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 282 (331)
T cd08273 204 VDVVFDGVGGES-YEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKL 282 (331)
T ss_pred ceEEEECCchHH-HHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHH
Confidence 999999999987 8899999999999999986543211 110 0112233333332221
Q ss_pred CHHHHHHHHHHHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEE
Q 018246 305 GMKETQEMLDFCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVI 351 (359)
Q Consensus 305 ~~~~~~~~~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv 351 (359)
..+.++.++++++++.+++.. +.+++++++++|+.+.++...||+|+
T Consensus 283 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 283 FRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 125688899999999998655 88999999999999998888899886
No 112
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.5e-33 Score=256.65 Aligned_cols=307 Identities=23% Similarity=0.309 Sum_probs=248.5
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
|+++++...+.++.+++++.+.|.+.+++|+|++.++++|++|+....|... ....|.++|||++|+|+.+|+++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 5677776555555677777777888999999999999999999998877543 233467899999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhh
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGI 169 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ 169 (359)
+||+|+.... ++ + ...|+|++|+.++.+.++++|+++++.+++.+++.+.
T Consensus 81 ~Gd~V~~~~~-------------------~~----~-------~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~ 130 (326)
T cd08272 81 VGDEVYGCAG-------------------GL----G-------GLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGI 130 (326)
T ss_pred CCCEEEEccC-------------------Cc----C-------CCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHH
Confidence 9999974321 00 0 1348999999999999999999999999999999999
Q ss_pred hhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH--HHHHHhcC
Q 018246 170 TVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDP--AKVKAAMG 246 (359)
Q Consensus 170 ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~~ 246 (359)
+||+++.....+++|++++|+|+ |.+|++++++|+..|++|++++++ ++.+.+ +++|.+.+++.... ..+.+...
T Consensus 131 ~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 208 (326)
T cd08272 131 TAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFA-RSLGADPIIYYRETVVEYVAEHTG 208 (326)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHH-HHcCCCEEEecchhHHHHHHHhcC
Confidence 99999878788899999999985 999999999999999999999988 888888 78999888876543 22333333
Q ss_pred --CccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCC-----------HHHHHHHH
Q 018246 247 --TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGG-----------MKETQEML 313 (359)
Q Consensus 247 --~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~-----------~~~~~~~~ 313 (359)
++|++++++++.. +...+++++++|+++.+|... ..+......+++++.+..... ...+..++
T Consensus 209 ~~~~d~v~~~~~~~~-~~~~~~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (326)
T cd08272 209 GRGFDVVFDTVGGET-LDASFEAVALYGRVVSILGGA---THDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAA 284 (326)
T ss_pred CCCCcEEEECCChHH-HHHHHHHhccCCEEEEEecCC---ccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHH
Confidence 7999999999866 888999999999999997653 222223336778877765432 34578888
Q ss_pred HHHHhCCCccc-E-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 314 DFCAKHNIAAD-I-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 314 ~~l~~g~i~~~-~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
+++.++.+++. . +.|++++++++|+.+.++...+|+++++
T Consensus 285 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 285 RLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred HHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 99999998765 3 8899999999999998887789999864
No 113
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=1.4e-32 Score=252.48 Aligned_cols=306 Identities=25% Similarity=0.341 Sum_probs=250.3
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGV-TNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
|+++.+...+.+..+++.+.+.+.+++++++|+|.++++|++|+....+.++. ..+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 45666554444555667676667789999999999999999999988776542 33467899999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhh
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGI 169 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ 169 (359)
+||+|+... .+|+|++|+.++.+.++++|+++++.+++.+++++.
T Consensus 81 ~Gd~V~~~~-----------------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ 125 (325)
T TIGR02824 81 VGDRVCALV-----------------------------------AGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFF 125 (325)
T ss_pred CCCEEEEcc-----------------------------------CCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHH
Confidence 999997431 238899999999999999999999999999999999
Q ss_pred hhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHhc
Q 018246 170 TVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK---VKAAM 245 (359)
Q Consensus 170 ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~ 245 (359)
++|+++.....+.++++|+|+|+ |++|++++++++..|++|+++.+++++.+.+ +++|.+.+++....+. +....
T Consensus 126 ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 204 (325)
T TIGR02824 126 TVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALGADIAINYREEDFVEVVKAET 204 (325)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCchhHHHHHHHHc
Confidence 99999888888899999999986 9999999999999999999999999888877 8899888877655433 33333
Q ss_pred --CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCC-CeeeCHHHHHhcCcEEEEeecCCH----------HHHHHH
Q 018246 246 --GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-PLEVPIFALVGARRLVGGSNVGGM----------KETQEM 312 (359)
Q Consensus 246 --~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~----------~~~~~~ 312 (359)
+++|++++++++.. +..++++++++|+++.+|.... ...++...++.+++++.+...... ..+.++
T Consensus 205 ~~~~~d~~i~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (325)
T TIGR02824 205 GGKGVDVILDIVGGSY-LNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHV 283 (325)
T ss_pred CCCCeEEEEECCchHH-HHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHH
Confidence 26999999999865 8899999999999999986542 225566666689999998775431 124667
Q ss_pred HHHHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 313 LDFCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 313 ~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
+++++++.+++.. +.+++++++++++.+.++...||+++++
T Consensus 284 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 284 WPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred HHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 7888899887544 7899999999999999888789999864
No 114
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.1e-33 Score=254.30 Aligned_cols=308 Identities=26% Similarity=0.369 Sum_probs=241.7
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
||++++..++....+++.+.+.|++.+++|+||+.++++|++|+..+.|......+|.++|||++|+|+.+|++++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 56766664332237889999999999999999999999999999888776543344678999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGIT 170 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~t 170 (359)
||+|+..+.. ...|+|++|+.++.+.++++|+++++.+++.+.+.+.+
T Consensus 81 Gd~V~~~~~~--------------------------------~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~ 128 (325)
T cd08271 81 GDRVAYHASL--------------------------------ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLT 128 (325)
T ss_pred CCEEEeccCC--------------------------------CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHH
Confidence 9999754311 13489999999999999999999999999999999999
Q ss_pred hhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHhc-
Q 018246 171 VYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPA---KVKAAM- 245 (359)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~- 245 (359)
|++++.....+.+|++|+|+|+ |.+|++++++++..|++|+++. ++++.+.+ +++|++.+++....+ .+....
T Consensus 129 a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 206 (325)
T cd08271 129 AYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYV-KSLGADHVIDYNDEDVCERIKEITG 206 (325)
T ss_pred HHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHH-HHcCCcEEecCCCccHHHHHHHHcC
Confidence 9999988888899999999997 8999999999999999998877 66777777 789998888766532 233333
Q ss_pred -CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCH--HHHHhcCcEEEEeecCC--------HHHHHHHHH
Q 018246 246 -GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPI--FALVGARRLVGGSNVGG--------MKETQEMLD 314 (359)
Q Consensus 246 -~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~--~~~~~k~~~i~g~~~~~--------~~~~~~~~~ 314 (359)
.++|++++++++.. ....+++++++|+++.++.......... .....+.+.+....... .+.+.++++
T Consensus 207 ~~~~d~vi~~~~~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (325)
T cd08271 207 GRGVDAVLDTVGGET-AAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLE 285 (325)
T ss_pred CCCCcEEEECCCcHh-HHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHH
Confidence 27999999999876 6778999999999999875432211111 11122233333322111 123577888
Q ss_pred HHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 315 FCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 315 ~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
++.++.+++.. +.++++++.++++.+.++...+|+++++
T Consensus 286 ~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 286 LLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred HHHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 99999887644 8899999999999999888789999863
No 115
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=6.6e-33 Score=252.76 Aligned_cols=302 Identities=25% Similarity=0.361 Sum_probs=243.4
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG---VTNYPIVPGHEIVGTVTKVGNNVSK 87 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 87 (359)
|+++.+...+....+++.+.+.|.+++++|+|++.++++|++|+..+.|... ....|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 5666665544444566777777888999999999999999999998877542 3445788999999999999999999
Q ss_pred CCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccch
Q 018246 88 FKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCA 167 (359)
Q Consensus 88 ~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~ 167 (359)
+++||+|+..+.. ...|+|++|+.++.+.++++|+++++..++.+++.
T Consensus 81 ~~~G~~V~~~~~~--------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 128 (309)
T cd05289 81 FKVGDEVFGMTPF--------------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLA 128 (309)
T ss_pred CCCCCEEEEccCC--------------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHH
Confidence 9999999755311 12489999999999999999999999999999999
Q ss_pred hhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhc-
Q 018246 168 GITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAM- 245 (359)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~- 245 (359)
+.++++++.....+.++++|+|+|+ |.+|++++++++..|++|+++.+++ +.+.+ +++|.+++++....+......
T Consensus 129 ~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~-~~~g~~~~~~~~~~~~~~~~~~ 206 (309)
T cd05289 129 GLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFL-RSLGADEVIDYTKGDFERAAAP 206 (309)
T ss_pred HHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHH-HHcCCCEEEeCCCCchhhccCC
Confidence 9999999988887799999999996 9999999999999999999998877 77777 789988888765533222112
Q ss_pred CCccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCC-HHHHHHHHHHHHhCCCccc
Q 018246 246 GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGG-MKETQEMLDFCAKHNIAAD 324 (359)
Q Consensus 246 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~-~~~~~~~~~~l~~g~i~~~ 324 (359)
.++|++++++++.. ...++++++++|+++.+|....... ..+.++.++....... ...+..++++++++.+.+.
T Consensus 207 ~~~d~v~~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (309)
T cd05289 207 GGVDAVLDTVGGET-LARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPV 281 (309)
T ss_pred CCceEEEECCchHH-HHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEe
Confidence 37999999999885 8999999999999999986543211 2334566655543322 5678899999999998765
Q ss_pred E-EEEccccHHHHHHHHHcCCccEEEEE
Q 018246 325 I-ELVRMDQINTAMERLAKSDVKYRFVI 351 (359)
Q Consensus 325 ~-~~~~l~~~~~a~~~~~~~~~~gkvvv 351 (359)
. +.|++++++++|+.+..+...+|+++
T Consensus 282 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 282 VDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred eccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 5 78999999999999998877788764
No 116
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=1.5e-32 Score=255.71 Aligned_cols=310 Identities=21% Similarity=0.231 Sum_probs=228.6
Q ss_pred ceeeeeecCCCCCccceeeecCC-CCCCeEEEEEeeeecchhhhhhhccCCCCCC-CCCcccccccEEEEEeCCCCC-CC
Q 018246 12 KAIGWAARDNTGTFSPFHFSRRE-TGADDVTIKILFCGICHSDLHCARNEWGVTN-YPIVPGHEIVGTVTKVGNNVS-KF 88 (359)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~-~p~~~G~e~~G~V~~vG~~v~-~~ 88 (359)
+++++...+.+..++..+++.|. +++++|+||+.++++|++|+..+.+...... .|.++|+|++|+|+++|++++ .|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence 34555443334334444444443 4899999999999999999988754322122 367899999999999999998 89
Q ss_pred CCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCC----ceEECCCCCCccccccc
Q 018246 89 KEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQH----YVLRFPDNMPLDAGAPL 164 (359)
Q Consensus 89 ~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~----~~~~lp~~l~~~~aa~l 164 (359)
++||+|+..... .....|+|++|++++.. .++++|+++++++++.+
T Consensus 82 ~~Gd~V~~~~~~------------------------------~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~ 131 (352)
T cd08247 82 KVGDEVCGIYPH------------------------------PYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAW 131 (352)
T ss_pred CCCCEEEEeecC------------------------------CCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHh
Confidence 999999754311 00135899999999987 78999999999999999
Q ss_pred cchhhhhhhHhHhcC-CCCCCCEEEEECC-chHHHHHHHHHHHC-CC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHH-
Q 018246 165 LCAGITVYSPMKYYG-MTEPGKHLGVAGL-GGLGHVAVKIGKAF-GL-KVTVISTSPKKESEAISKLGADAFLVSSDPA- 239 (359)
Q Consensus 165 ~~~~~ta~~~l~~~~-~~~~g~~VlI~G~-g~vG~~a~~la~~~-g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~- 239 (359)
++++.|||+++.... .+++|++|+|+|+ |.+|++++++|+.. |. .|+.+. ++++.+.+ +++|++++++.++.+
T Consensus 132 ~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~-~~~g~~~~i~~~~~~~ 209 (352)
T cd08247 132 PLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELN-KKLGADHFIDYDAHSG 209 (352)
T ss_pred HHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHH-HHhCCCEEEecCCCcc
Confidence 999999999998887 6799999999987 79999999999987 55 566665 45556666 889999988865433
Q ss_pred --H----HHHhc--CCccEEEECCCChhhHHHHHhccc---cCCEEEEecCCC-CCee-----------eCHHHH----H
Q 018246 240 --K----VKAAM--GTMDYIIDTVSAVHSLAPLLGLLK---VNGKLVTVGLPE-KPLE-----------VPIFAL----V 292 (359)
Q Consensus 240 --~----~~~~~--~~~d~vid~~g~~~~~~~~~~~l~---~~G~~v~~g~~~-~~~~-----------~~~~~~----~ 292 (359)
. +.... +++|+++||+|+......++++++ ++|+++.++... .... .....+ .
T Consensus 210 ~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (352)
T cd08247 210 VKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLG 289 (352)
T ss_pred cchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhc
Confidence 2 22223 389999999998655888999999 999999874322 1111 011111 1
Q ss_pred hcCcEEEEeec-CCHHHHHHHHHHHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 293 GARRLVGGSNV-GGMKETQEMLDFCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 293 ~k~~~i~g~~~-~~~~~~~~~~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
.+...+..... .....+..+++++.++.+++.. +.++++++++||+.+.+++..||+++++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 290 LWSYNYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred CCCcceEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 12222222111 1124578899999999998655 8899999999999999888889999864
No 117
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.4e-32 Score=249.38 Aligned_cols=311 Identities=22% Similarity=0.310 Sum_probs=249.5
Q ss_pred cceeeeeecCCCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGNNVSKFK 89 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (359)
|+++.+...+.+..+++.+.+.|.+++++++|+|.++++|++|+....|.+. ...+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 4566655434455677777777888999999999999999999988877654 234477899999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhh
Q 018246 90 EGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGI 169 (359)
Q Consensus 90 vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ 169 (359)
+||+|+..+.. +....|++++|+.++.+.++++|+++++++++.+++.+.
T Consensus 81 ~Gd~V~~~~~~------------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 130 (328)
T cd08268 81 VGDRVSVIPAA------------------------------DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYL 130 (328)
T ss_pred CCCEEEecccc------------------------------ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHH
Confidence 99999754310 012348999999999999999999999999999999999
Q ss_pred hhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHhc
Q 018246 170 TVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK---VKAAM 245 (359)
Q Consensus 170 ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~ 245 (359)
++|.++.....+.++++|+|+|+ |.+|++++++++..|++|+++++++++.+.+ +++|.+.+++.+..+. +....
T Consensus 131 ~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 209 (328)
T cd08268 131 TAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LALGAAHVIVTDEEDLVAEVLRIT 209 (328)
T ss_pred HHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEecCCccHHHHHHHHh
Confidence 99999988877789999999986 9999999999999999999999999888888 7889888887665322 33333
Q ss_pred C--CccEEEECCCChhhHHHHHhccccCCEEEEecCCCC-CeeeCHHHHHhcCcEEEEeecCC----HHH----HHHHHH
Q 018246 246 G--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-PLEVPIFALVGARRLVGGSNVGG----MKE----TQEMLD 314 (359)
Q Consensus 246 ~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~----~~~----~~~~~~ 314 (359)
. ++|++++++++.. ...++++++++|+++.+|.... ...++....+.++.++.+..... ..+ ++.+.+
T Consensus 210 ~~~~~d~vi~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (328)
T cd08268 210 GGKGVDVVFDPVGGPQ-FAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILD 288 (328)
T ss_pred CCCCceEEEECCchHh-HHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHH
Confidence 2 7999999999965 8889999999999999986442 23445554577888888876542 223 444556
Q ss_pred HHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 315 FCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 315 ~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
++.++.+.+.. ..|++++++++++.+.++...+|+++++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 289 GLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred HHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 67778786654 7899999999999998888788999863
No 118
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=7.7e-32 Score=247.10 Aligned_cols=304 Identities=27% Similarity=0.414 Sum_probs=246.8
Q ss_pred cceeeeeecCCCCCccceeeecCCCC-CCeEEEEEeeeecchhhhhhhccCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 018246 11 QKAIGWAARDNTGTFSPFHFSRRETG-ADDVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGNNVSKF 88 (359)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 88 (359)
|+++++...+.+..+++.+.+ |.+. +++++|++.++++|++|+..+.|.+. ...+|.++|+|++|+|+.+|++++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 456665543445567776666 6665 59999999999999999998877653 23446689999999999999999999
Q ss_pred CCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchh
Q 018246 89 KEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAG 168 (359)
Q Consensus 89 ~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~ 168 (359)
++||+|+..+ ..|++++|+.++.+.++++|+++++.+++.+...+
T Consensus 80 ~~G~~V~~~~-----------------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 124 (323)
T cd08241 80 KVGDRVVALT-----------------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTY 124 (323)
T ss_pred CCCCEEEEec-----------------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHH
Confidence 9999997542 13889999999999999999999999988899999
Q ss_pred hhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHh
Q 018246 169 ITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK---VKAA 244 (359)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~ 244 (359)
.+|+.++.....+.++++|+|+|+ |++|++++++|+..|++|+++++++++.+.+ +++|++.+++....+. +...
T Consensus 125 ~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~ 203 (323)
T cd08241 125 GTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA-RALGADHVIDYRDPDLRERVKAL 203 (323)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH-HHcCCceeeecCCccHHHHHHHH
Confidence 999999887777789999999997 9999999999999999999999999998888 7889888887665332 3333
Q ss_pred cC--CccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCee-eCHHHHHhcCcEEEEeecCCH---------HHHHHH
Q 018246 245 MG--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLE-VPIFALVGARRLVGGSNVGGM---------KETQEM 312 (359)
Q Consensus 245 ~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~k~~~i~g~~~~~~---------~~~~~~ 312 (359)
.. ++|++++++|+.. ...++++++++|+++.+|....... ++....+.++.++.+...... ..++++
T Consensus 204 ~~~~~~d~v~~~~g~~~-~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (323)
T cd08241 204 TGGRGVDVVYDPVGGDV-FEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAEL 282 (323)
T ss_pred cCCCCcEEEEECccHHH-HHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHH
Confidence 32 7999999999855 8889999999999999986543322 334445678888888765432 447788
Q ss_pred HHHHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEE
Q 018246 313 LDFCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVID 352 (359)
Q Consensus 313 ~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~ 352 (359)
++++.++.+++.. +.|+++++.++|+.+.++...+|++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 283 FDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred HHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 8999999887655 789999999999999888777888863
No 119
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.1e-32 Score=248.32 Aligned_cols=298 Identities=22% Similarity=0.315 Sum_probs=232.3
Q ss_pred cCCCCCc--cceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC---CCCCCCcccccccEEEEEeCCCCCCCCCCCE
Q 018246 19 RDNTGTF--SPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG---VTNYPIVPGHEIVGTVTKVGNNVSKFKEGDK 93 (359)
Q Consensus 19 ~~~~~~~--~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdr 93 (359)
++.+.++ ++.+.+.|.++++||+|++.++++|++|++...|..+ ....+..+|||++|+|+++|++++++++||+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~ 85 (319)
T cd08267 6 YGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDE 85 (319)
T ss_pred CCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCE
Confidence 3444454 7778888999999999999999999999998877542 1234668999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhhhh
Q 018246 94 VGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYS 173 (359)
Q Consensus 94 V~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~ 173 (359)
|+..+.. ...|+|++|+.++.+.++++|+++++++++.+++.+.+||+
T Consensus 86 V~~~~~~--------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~ 133 (319)
T cd08267 86 VFGRLPP--------------------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQ 133 (319)
T ss_pred EEEeccC--------------------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHH
Confidence 9755321 13489999999999999999999999999999999999999
Q ss_pred HhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhc--CCccE
Q 018246 174 PMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAM--GTMDY 250 (359)
Q Consensus 174 ~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~--~~~d~ 250 (359)
++.....+++|++|+|+|+ |++|++++++|+..|++|++++++ ++.+.+ +++|.+++++....+...... +++|+
T Consensus 134 ~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~d~ 211 (319)
T cd08267 134 ALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELV-RSLGADEVIDYTTEDFVALTAGGEKYDV 211 (319)
T ss_pred HHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHH-HHcCCCEeecCCCCCcchhccCCCCCcE
Confidence 9998887799999999997 999999999999999999998865 677777 889998888765433222222 37999
Q ss_pred EEECCCChh-hHHHHHhccccCCEEEEecCCCCCeeeC-----HHHH-HhcCcEEEEeecCCHHHHHHHHHHHHhCCCcc
Q 018246 251 IIDTVSAVH-SLAPLLGLLKVNGKLVTVGLPEKPLEVP-----IFAL-VGARRLVGGSNVGGMKETQEMLDFCAKHNIAA 323 (359)
Q Consensus 251 vid~~g~~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----~~~~-~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~ 323 (359)
+++|+++.. .....+..++++|+++.+|......... .... ..+.+.... .......+.++++++.++++++
T Consensus 212 vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~ 290 (319)
T cd08267 212 IFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFL-AKPNAEDLEQLAELVEEGKLKP 290 (319)
T ss_pred EEECCCchHHHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEE-ecCCHHHHHHHHHHHHCCCeee
Confidence 999998532 2334444599999999998654321111 1111 112222222 2223677999999999999876
Q ss_pred cE-EEEccccHHHHHHHHHcCCccEEEEE
Q 018246 324 DI-ELVRMDQINTAMERLAKSDVKYRFVI 351 (359)
Q Consensus 324 ~~-~~~~l~~~~~a~~~~~~~~~~gkvvv 351 (359)
.. +.|+++++++||+.+.++...+|+++
T Consensus 291 ~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 291 VIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred eeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 55 88999999999999998877788874
No 120
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=1.2e-31 Score=243.89 Aligned_cols=283 Identities=21% Similarity=0.354 Sum_probs=229.1
Q ss_pred cCCCCCCeEEEEEeeeecchhhhhhhccCCC-CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEeccccCCCCCcccc
Q 018246 32 RRETGADDVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQ 110 (359)
Q Consensus 32 ~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~~~~~~~c~~~~ 110 (359)
.|.+.+++|+|++.++++|++|+..+.|.++ ...+|.++|+|++|+|+++|++++++++||+|+..+.
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----------- 70 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG----------- 70 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-----------
Confidence 5778999999999999999999999887654 2356778999999999999999999999999975431
Q ss_pred CCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhhhhHhHhcCCCCCCCEEEEE
Q 018246 111 QGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVA 190 (359)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ 190 (359)
...|+|++|++++.+.++++|+++++++++.++..+.+||+++. ...+++|++|+|+
T Consensus 71 ----------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~ 127 (303)
T cd08251 71 ----------------------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQ 127 (303)
T ss_pred ----------------------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEe
Confidence 13489999999999999999999999999999999999999986 5666999999998
Q ss_pred C-CchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHhcC--CccEEEECCCChhhHHHH
Q 018246 191 G-LGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK---VKAAMG--TMDYIIDTVSAVHSLAPL 264 (359)
Q Consensus 191 G-~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~~--~~d~vid~~g~~~~~~~~ 264 (359)
| +|.+|+++++++++.|++|+++++++++.+.+ +++|++.+++....+. +..... ++|+++|++++.. ....
T Consensus 128 ~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~-~~~~ 205 (303)
T cd08251 128 TATGGTGLMAVQLARLKGAEIYATASSDDKLEYL-KQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEA-IQKG 205 (303)
T ss_pred cCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHH-HHHH
Confidence 6 59999999999999999999999999888888 8899998888765432 333333 7999999998755 8889
Q ss_pred HhccccCCEEEEecCCCC--CeeeCHHHHHhcCcEEEEeec-----CC----HHHHHHHHHHHHhCCCcccE-EEEcccc
Q 018246 265 LGLLKVNGKLVTVGLPEK--PLEVPIFALVGARRLVGGSNV-----GG----MKETQEMLDFCAKHNIAADI-ELVRMDQ 332 (359)
Q Consensus 265 ~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~-----~~----~~~~~~~~~~l~~g~i~~~~-~~~~l~~ 332 (359)
+++++++|+++.+|.... ...++... +.++..+..... .. .+.+.++++++.++.+++.. +.|++++
T Consensus 206 ~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 284 (303)
T cd08251 206 LNCLAPGGRYVEIAMTALKSAPSVDLSV-LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDD 284 (303)
T ss_pred HHHhccCcEEEEEeccCCCccCccChhH-hhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHH
Confidence 999999999999875431 22333333 223333332221 11 13367788899999987654 8899999
Q ss_pred HHHHHHHHHcCCccEEEEE
Q 018246 333 INTAMERLAKSDVKYRFVI 351 (359)
Q Consensus 333 ~~~a~~~~~~~~~~gkvvv 351 (359)
++++++.+.++...||+++
T Consensus 285 ~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 285 IGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred HHHHHHHHHhCCCcceEeC
Confidence 9999999998888888874
No 121
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.5e-31 Score=242.84 Aligned_cols=295 Identities=24% Similarity=0.380 Sum_probs=236.2
Q ss_pred CCCCccceeeecCCCCCCeEEEEEeeeecchhhhhhhccCCC-CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEecc
Q 018246 21 NTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVL 99 (359)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~ 99 (359)
.+..+++.+.+.|.+++++|+|++.++++|++|+....|.++ ....|.++|||++|+|+.+|+++.++++||+|+...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~- 88 (337)
T cd08275 10 GLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLT- 88 (337)
T ss_pred CccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEec-
Confidence 334577777777788999999999999999999998877653 234577899999999999999999999999997542
Q ss_pred ccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhhhhHhHhcC
Q 018246 100 VASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYG 179 (359)
Q Consensus 100 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~ 179 (359)
..|+|++|+.++.+.++++|+++++++++.+.+...+||+++....
T Consensus 89 ----------------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~ 134 (337)
T cd08275 89 ----------------------------------RFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELG 134 (337)
T ss_pred ----------------------------------CCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhh
Confidence 2388999999999999999999999999999999999999998888
Q ss_pred CCCCCCEEEEECC-chHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHhc-CCccEEEE
Q 018246 180 MTEPGKHLGVAGL-GGLGHVAVKIGKAF-GLKVTVISTSPKKESEAISKLGADAFLVSSDPA---KVKAAM-GTMDYIID 253 (359)
Q Consensus 180 ~~~~g~~VlI~G~-g~vG~~a~~la~~~-g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~-~~~d~vid 253 (359)
.+++|++|+|+|+ |.+|++++++|+.. +..++.. ..+++.+.+ +++|++.+++.+..+ .+.... .++|+++|
T Consensus 135 ~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~-~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~ 212 (337)
T cd08275 135 NLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGT-ASASKHEAL-KENGVTHVIDYRTQDYVEEVKKISPEGVDIVLD 212 (337)
T ss_pred CCCCCCEEEEEcCcchHHHHHHHHHHHccCcEEEEe-CCHHHHHHH-HHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEE
Confidence 8899999999997 99999999999998 3333322 234566766 789988888776432 233333 37999999
Q ss_pred CCCChhhHHHHHhccccCCEEEEecCCCCC-----------------eeeCHHHHHhcCcEEEEeecCCH--------HH
Q 018246 254 TVSAVHSLAPLLGLLKVNGKLVTVGLPEKP-----------------LEVPIFALVGARRLVGGSNVGGM--------KE 308 (359)
Q Consensus 254 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------------~~~~~~~~~~k~~~i~g~~~~~~--------~~ 308 (359)
++|+.. ...++++++++|+++.+|..... ..+.....+.++.++.++..... ..
T Consensus 213 ~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (337)
T cd08275 213 ALGGED-TRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEV 291 (337)
T ss_pred CCcHHH-HHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHH
Confidence 999875 88999999999999999864321 12223455678888888764311 23
Q ss_pred HHHHHHHHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEEEc
Q 018246 309 TQEMLDFCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVIDV 353 (359)
Q Consensus 309 ~~~~~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 353 (359)
+.++++++.++.+++.. +.|++++++++++.+.++...||+++++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 292 MDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 67788889999887655 7899999999999999888789999864
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.98 E-value=1.9e-30 Score=234.24 Aligned_cols=273 Identities=20% Similarity=0.271 Sum_probs=224.1
Q ss_pred CeEEEEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCC
Q 018246 38 DDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYC 117 (359)
Q Consensus 38 ~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~ 117 (359)
+||+||+.++++|++|++...|.. ..+|.++|||++|+|+++|++++.+++||+|+...
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence 589999999999999999988764 34577899999999999999999999999997542
Q ss_pred cccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhhhhHhHhcCCCCCCCEEEEEC-CchHH
Q 018246 118 PNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAG-LGGLG 196 (359)
Q Consensus 118 ~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G-~g~vG 196 (359)
.|+|++|+.++.+.++++|+++++.+++.+++++.++|.++.....+++|++|+|+| .|.+|
T Consensus 60 -----------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g 122 (293)
T cd05195 60 -----------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVG 122 (293)
T ss_pred -----------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHH
Confidence 389999999999999999999999999999999999999998877779999999997 59999
Q ss_pred HHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC--CcEEecCCCHHH---HHHhc--CCccEEEECCCChhhHHHHHhccc
Q 018246 197 HVAVKIGKAFGLKVTVISTSPKKESEAISKLG--ADAFLVSSDPAK---VKAAM--GTMDYIIDTVSAVHSLAPLLGLLK 269 (359)
Q Consensus 197 ~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g--~~~v~~~~~~~~---~~~~~--~~~d~vid~~g~~~~~~~~~~~l~ 269 (359)
++++++|+..|++|+++++++++.+.+ ++++ ++.+++....+. +.+.. .++|++++++++.. +..++++++
T Consensus 123 ~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~ 200 (293)
T cd05195 123 QAAIQLAQHLGAEVFATVGSEEKREFL-RELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGEL-LRASWRCLA 200 (293)
T ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHH-HHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchH-HHHHHHhcc
Confidence 999999999999999999998888888 6676 677887765433 33333 27999999999884 999999999
Q ss_pred cCCEEEEecCCCCC--eeeCHHHHHhcCcEEEEeecCC---------HHHHHHHHHHHHhCCCcccE-EEEccccHHHHH
Q 018246 270 VNGKLVTVGLPEKP--LEVPIFALVGARRLVGGSNVGG---------MKETQEMLDFCAKHNIAADI-ELVRMDQINTAM 337 (359)
Q Consensus 270 ~~G~~v~~g~~~~~--~~~~~~~~~~k~~~i~g~~~~~---------~~~~~~~~~~l~~g~i~~~~-~~~~l~~~~~a~ 337 (359)
++|+++.+|..... ..++... +.++.++....... ...+..+++++.++++++.. ..++++++++++
T Consensus 201 ~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 279 (293)
T cd05195 201 PFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAF 279 (293)
T ss_pred cCceEEEeeccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHH
Confidence 99999999865421 2233322 34556655543321 13477888999999987654 789999999999
Q ss_pred HHHHcCCccEEEEE
Q 018246 338 ERLAKSDVKYRFVI 351 (359)
Q Consensus 338 ~~~~~~~~~gkvvv 351 (359)
+.+..+...+|+++
T Consensus 280 ~~~~~~~~~~~ivv 293 (293)
T cd05195 280 RLMQSGKHIGKVVL 293 (293)
T ss_pred HHHhcCCCCceecC
Confidence 99998887788774
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=4.7e-30 Score=231.33 Aligned_cols=268 Identities=20% Similarity=0.327 Sum_probs=219.6
Q ss_pred EEEeeeecchhhhhhhccCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCcccc
Q 018246 42 IKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMI 121 (359)
Q Consensus 42 V~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~ 121 (359)
||+.++++|++|++...|.++ .|.++|||++|+|+++|++++.+++||+|+...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------- 55 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------- 55 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence 789999999999999877643 357899999999999999999999999997542
Q ss_pred cccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHH
Q 018246 122 LTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAV 200 (359)
Q Consensus 122 ~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~ 200 (359)
+|+|++|+.++.+.++++|+++++++++.+.+.+.++|.++.....+.+|++|+|+|+ |.+|++++
T Consensus 56 -------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~ 122 (288)
T smart00829 56 -------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAI 122 (288)
T ss_pred -------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHH
Confidence 3899999999999999999999999999999999999999877777799999999985 99999999
Q ss_pred HHHHHCCCeEEEEeCChhhHHHHHHHcCC--cEEecCCCHHH---HHHhcC--CccEEEECCCChhhHHHHHhccccCCE
Q 018246 201 KIGKAFGLKVTVISTSPKKESEAISKLGA--DAFLVSSDPAK---VKAAMG--TMDYIIDTVSAVHSLAPLLGLLKVNGK 273 (359)
Q Consensus 201 ~la~~~g~~V~~v~~~~~~~~~~~~~~g~--~~v~~~~~~~~---~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~ 273 (359)
++++..|++|+++++++++.+.+ +++|+ +.++++++.+. +..... ++|+++|++++.. +...+++++++|+
T Consensus 123 ~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~g~ 200 (288)
T smart00829 123 QLAQHLGAEVFATAGSPEKRDFL-RELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEF-LDASLRCLAPGGR 200 (288)
T ss_pred HHHHHcCCEEEEEeCCHHHHHHH-HHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHH-HHHHHHhccCCcE
Confidence 99999999999999999999888 78997 77887665433 333332 7999999999754 8889999999999
Q ss_pred EEEecCCCC--CeeeCHHHHHhcCcEEEEeecC----C----HHHHHHHHHHHHhCCCccc-EEEEccccHHHHHHHHHc
Q 018246 274 LVTVGLPEK--PLEVPIFALVGARRLVGGSNVG----G----MKETQEMLDFCAKHNIAAD-IELVRMDQINTAMERLAK 342 (359)
Q Consensus 274 ~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~~----~----~~~~~~~~~~l~~g~i~~~-~~~~~l~~~~~a~~~~~~ 342 (359)
++.+|.... ...++... +.++.++.+.... . ...+..+++++.++++.+. ++.|++++++++++.+..
T Consensus 201 ~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (288)
T smart00829 201 FVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQ 279 (288)
T ss_pred EEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhc
Confidence 999986531 22333333 3566666654432 1 1346778888989988764 488999999999999998
Q ss_pred CCccEEEEE
Q 018246 343 SDVKYRFVI 351 (359)
Q Consensus 343 ~~~~gkvvv 351 (359)
+...+|+++
T Consensus 280 ~~~~~~ivv 288 (288)
T smart00829 280 GKHIGKVVL 288 (288)
T ss_pred CCCcceEeC
Confidence 877788764
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.97 E-value=1.9e-28 Score=220.57 Aligned_cols=248 Identities=25% Similarity=0.325 Sum_probs=199.0
Q ss_pred cCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCcc
Q 018246 59 NEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGY 138 (359)
Q Consensus 59 g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~ 138 (359)
|.++ ..+|.++|||++|+|+++|++++.+++||+|+.. +.|
T Consensus 14 ~~~~-~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~--------------------------------------~~~ 54 (277)
T cd08255 14 GTEK-LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF--------------------------------------GPH 54 (277)
T ss_pred cCcc-CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec--------------------------------------CCc
Confidence 4444 4478999999999999999999999999999732 468
Q ss_pred ceEEEeeCCceEECCCCCCccccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCe-EEEEeCCh
Q 018246 139 SDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISTSP 217 (359)
Q Consensus 139 a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~-V~~v~~~~ 217 (359)
++|++++.+.++++|+++++++++.+ +.+.|||+++. ...+++|++|+|+|+|.+|++++++|+++|++ |+++++++
T Consensus 55 ~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~-~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~ 132 (277)
T cd08255 55 AERVVVPANLLVPLPDGLPPERAALT-ALAATALNGVR-DAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDA 132 (277)
T ss_pred ceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCH
Confidence 99999999999999999999998888 78999999986 45669999999999999999999999999997 99999999
Q ss_pred hhHHHHHHHcC-CcEEecCCCHHHHHHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCc
Q 018246 218 KKESEAISKLG-ADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARR 296 (359)
Q Consensus 218 ~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~ 296 (359)
++.+.+ +++| .+.+++..... .-..++|+++++++....+...+++++++|+++.+|............+..+.+
T Consensus 133 ~~~~~~-~~~g~~~~~~~~~~~~---~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~ 208 (277)
T cd08255 133 ARRELA-EALGPADPVAADTADE---IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRL 208 (277)
T ss_pred HHHHHH-HHcCCCccccccchhh---hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccC
Confidence 998866 8888 56665443211 012379999999887666889999999999999998765431112233444666
Q ss_pred EEEEeecCC------------HHHHHHHHHHHHhCCCcccE-EEEccccHHHHHHHHHcC-CccEEEEE
Q 018246 297 LVGGSNVGG------------MKETQEMLDFCAKHNIAADI-ELVRMDQINTAMERLAKS-DVKYRFVI 351 (359)
Q Consensus 297 ~i~g~~~~~------------~~~~~~~~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~-~~~gkvvv 351 (359)
++.+..... .+.++++++++.++.+++.. +.|+++++++||+.+.++ ....|+++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 209 PIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred eEEeecccccccccccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 777655432 14588999999999987655 889999999999999877 34477764
No 125
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.96 E-value=3.4e-27 Score=201.78 Aligned_cols=283 Identities=17% Similarity=0.183 Sum_probs=221.9
Q ss_pred CCCCCCeEEEEEeeeecchhhhhhhccCCCC-CCCCCccc----ccccEEEEEeCCCCCCCCCCCEEEEeccccCCCCCc
Q 018246 33 RETGADDVTIKILFCGICHSDLHCARNEWGV-TNYPIVPG----HEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCE 107 (359)
Q Consensus 33 ~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G----~e~~G~V~~vG~~v~~~~vGdrV~v~~~~~~~~~c~ 107 (359)
.++++++||||..+.+..|.-...++-..+. ...|..+| ..++|+|++. ..+.+++||.|...
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g~---------- 100 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWGI---------- 100 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEEEe----------
Confidence 4568999999999999987655444321111 12233333 2679999994 56789999999622
Q ss_pred cccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCc--eEECCC--CCCcccc-ccccchhhhhhhHhHhcCCCC
Q 018246 108 SCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHY--VLRFPD--NMPLDAG-APLLCAGITVYSPMKYYGMTE 182 (359)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~--~~~lp~--~l~~~~a-a~l~~~~~ta~~~l~~~~~~~ 182 (359)
-+|.||.+++... .++++. ..++... ..+..+.+|||..+++....+
T Consensus 101 ----------------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk 152 (343)
T KOG1196|consen 101 ----------------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPK 152 (343)
T ss_pred ----------------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCC
Confidence 3799999997653 555554 3444333 478889999999999999989
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH----HHHhc-CCccEEEECCC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK----VKAAM-GTMDYIIDTVS 256 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~----~~~~~-~~~d~vid~~g 256 (359)
+|++|+|.|| |++|+++.|+|+.+|++|+.++.++|+...+..+||.+..+||+++.. +++.. .++|+.||.+|
T Consensus 153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVG 232 (343)
T KOG1196|consen 153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVG 232 (343)
T ss_pred CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccC
Confidence 9999999876 999999999999999999999999999999988899999999988732 22222 39999999999
Q ss_pred ChhhHHHHHhccccCCEEEEecCCCC---Cee---eCHHHHHhcCcEEEEeecCCHHH-----HHHHHHHHHhCCCcccE
Q 018246 257 AVHSLAPLLGLLKVNGKLVTVGLPEK---PLE---VPIFALVGARRLVGGSNVGGMKE-----TQEMLDFCAKHNIAADI 325 (359)
Q Consensus 257 ~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~---~~~~~~~~k~~~i~g~~~~~~~~-----~~~~~~~l~~g~i~~~~ 325 (359)
+.. ++..+..|+..||++.+|..+. ..+ .+....+.|.+++.|+......+ ++.+..++++|+|+-.-
T Consensus 233 G~~-lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~e 311 (343)
T KOG1196|consen 233 GKM-LDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVE 311 (343)
T ss_pred cHH-HHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEeh
Confidence 988 9999999999999999997663 111 23456678999999977655433 67888899999997655
Q ss_pred E-EEccccHHHHHHHHHcCCccEEEEEEcCCC
Q 018246 326 E-LVRMDQINTAMERLAKSDVKYRFVIDVGNS 356 (359)
Q Consensus 326 ~-~~~l~~~~~a~~~~~~~~~~gkvvv~~~~~ 356 (359)
+ .-.|+..++||..|.++++.||-++.+..|
T Consensus 312 di~~Glen~P~A~vglf~GkNvGKqiv~va~E 343 (343)
T KOG1196|consen 312 DIADGLENGPSALVGLFHGKNVGKQLVKVARE 343 (343)
T ss_pred hHHHHHhccHHHHHHHhccCcccceEEEeecC
Confidence 3 337999999999999999999999998753
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.96 E-value=4.9e-28 Score=235.68 Aligned_cols=290 Identities=16% Similarity=0.215 Sum_probs=238.4
Q ss_pred CCCCccceeeecC---CCCCCeEEEEEeeeecchhhhhhhccCCCCCCCC-------CcccccccEEEEEeCCCCCCCCC
Q 018246 21 NTGTFSPFHFSRR---ETGADDVTIKILFCGICHSDLHCARNEWGVTNYP-------IVPGHEIVGTVTKVGNNVSKFKE 90 (359)
Q Consensus 21 ~~~~~~~~~~~~~---~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p-------~~~G~e~~G~V~~vG~~v~~~~v 90 (359)
.-.+++|.+.+.. +..++.-+--|-|+.||++|+.+..|..+....| ..+|-|++|+ .+-
T Consensus 1425 DlsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~ 1494 (2376)
T KOG1202|consen 1425 DLSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DAS 1494 (2376)
T ss_pred cccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCC
Confidence 3445667666654 3467778899999999999999999987654443 4678888887 345
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCceEECCCCCCccccccccchhhh
Q 018246 91 GDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGIT 170 (359)
Q Consensus 91 GdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~t 170 (359)
|.||+.+. +--++++-+.++.+++|.+|+...+++|++.|+.+.|
T Consensus 1495 GrRvM~mv-----------------------------------pAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsT 1539 (2376)
T KOG1202|consen 1495 GRRVMGMV-----------------------------------PAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYST 1539 (2376)
T ss_pred CcEEEEee-----------------------------------ehhhhhhhhhcchhhhhhCCcccchhhcccCceEeee
Confidence 99998664 2367899999999999999999999999999999999
Q ss_pred hhhHhHhcCCCCCCCEEEEE-CCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC---CcEEecCCCHHH---HHH
Q 018246 171 VYSPMKYYGMTEPGKHLGVA-GLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLG---ADAFLVSSDPAK---VKA 243 (359)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~-G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g---~~~v~~~~~~~~---~~~ 243 (359)
||+++...++.++|++|||+ |+|++|++|+.+|.+.|.+|+-++.+.|+++++.+.|+ .+++-|+++.++ +.+
T Consensus 1540 aYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~ 1619 (2376)
T KOG1202|consen 1540 AYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLW 1619 (2376)
T ss_pred ehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHH
Confidence 99999999999999999998 57999999999999999999999999999999988888 467777776433 334
Q ss_pred hcC--CccEEEECCCChhhHHHHHhccccCCEEEEecCCC--CCeeeCHHHHHhcCcEEEEeec-----CCHHHHHHHHH
Q 018246 244 AMG--TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE--KPLEVPIFALVGARRLVGGSNV-----GGMKETQEMLD 314 (359)
Q Consensus 244 ~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~k~~~i~g~~~-----~~~~~~~~~~~ 314 (359)
.++ |+|+|++....+. +..+++||+.+||+..+|-.. .+-++.+. .+.||.+++|..+ +..+++.++..
T Consensus 1620 ~T~GrGVdlVLNSLaeEk-LQASiRCLa~~GRFLEIGKfDLSqNspLGMa-vfLkNvsfHGiLLDsvmege~e~~~ev~~ 1697 (2376)
T KOG1202|consen 1620 HTKGRGVDLVLNSLAEEK-LQASIRCLALHGRFLEIGKFDLSQNSPLGMA-VFLKNVSFHGILLDSVMEGEEEMWREVAA 1697 (2376)
T ss_pred HhcCCCeeeehhhhhHHH-HHHHHHHHHhcCeeeeecceecccCCcchhh-hhhcccceeeeehhhhhcCcHHHHHHHHH
Confidence 443 8999999999988 999999999999999998654 23334444 4579999999665 33466777777
Q ss_pred HHHhC----CCcccE-EEEccccHHHHHHHHHcCCccEEEEEEcCCCc
Q 018246 315 FCAKH----NIAADI-ELVRMDQINTAMERLAKSDVKYRFVIDVGNSK 357 (359)
Q Consensus 315 ~l~~g----~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~~~ 357 (359)
++++| ..+|.. ++|+-.++++||++|.++++.||||+++..|.
T Consensus 1698 Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~eE 1745 (2376)
T KOG1202|consen 1698 LVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRAEE 1745 (2376)
T ss_pred HHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEcccc
Confidence 77665 445544 89999999999999999999999999998763
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.90 E-value=9.6e-24 Score=162.27 Aligned_cols=108 Identities=36% Similarity=0.661 Sum_probs=93.5
Q ss_pred CCeEEEEEeeeecchhhhhhhccC-CCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEeccccCCCCCccccCCCCC
Q 018246 37 ADDVTIKILFCGICHSDLHCARNE-WGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLEN 115 (359)
Q Consensus 37 ~~eVlV~v~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~ 115 (359)
|+||||||+++|||++|+++++|. ......|.++|||++|+|+++|++++.|++||||++.+.. .|..|.+|+.+.++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~~~~~ 79 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNI-GCGECEYCLSGRPN 79 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEE-ETSSSHHHHTTTGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeeccc-CccCchhhcCCccc
Confidence 789999999999999999999983 4567889999999999999999999999999999886665 69999999999999
Q ss_pred CCcccccccccccCCCCCCCCccceEEEeeCCceEEC
Q 018246 116 YCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRF 152 (359)
Q Consensus 116 ~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~~~~l 152 (359)
.|.+.... |...+|+|+||+++|+++++|+
T Consensus 80 ~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 80 LCPNPEVL-------GLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GTTTBEET-------TTSSTCSSBSEEEEEGGGEEEE
T ss_pred cCCCCCEe-------EcCCCCcccCeEEEehHHEEEC
Confidence 99876544 3347799999999999999985
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.75 E-value=3.2e-17 Score=130.23 Aligned_cols=124 Identities=31% Similarity=0.465 Sum_probs=112.4
Q ss_pred hHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEECCCChhhHHHHHhcc
Q 018246 194 GLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPA---KVKAAMG--TMDYIIDTVSAVHSLAPLLGLL 268 (359)
Q Consensus 194 ~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l 268 (359)
++|++++|+|++.|++|+++++++++++.+ +++|+++++++++.+ .+.++++ ++|+||||+|+..+++.+++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~-~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELA-KELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHH-HHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHH-HhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence 689999999999999999999999999888 899999999988753 4555554 6999999999878799999999
Q ss_pred ccCCEEEEecCCC-CCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHh
Q 018246 269 KVNGKLVTVGLPE-KPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAK 318 (359)
Q Consensus 269 ~~~G~~v~~g~~~-~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~ 318 (359)
+++|+++.+|... ...+++...++.+++++.|+..++.++++++++++++
T Consensus 80 ~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 80 RPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp EEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred ccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence 9999999999988 6789999999999999999999999999999999864
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.55 E-value=1e-13 Score=128.90 Aligned_cols=173 Identities=16% Similarity=0.111 Sum_probs=137.3
Q ss_pred hhHhHhc-CCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccE
Q 018246 172 YSPMKYY-GMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDY 250 (359)
Q Consensus 172 ~~~l~~~-~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~ 250 (359)
|.++.+. +..-+|++|+|.|.|++|+.+++.++..|++|+++++++.|.+.+ +.+|++.+. . .+...+.|+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A-~~~G~~~~~-~------~e~v~~aDV 260 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQA-AMEGYEVMT-M------EEAVKEGDI 260 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHHH-HhcCCEEcc-H------HHHHcCCCE
Confidence 4555443 444689999999999999999999999999999999999998888 788985432 1 233357899
Q ss_pred EEECCCChhhHHHH-HhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHH-HHH--HHHHHHHhCCC-cc--
Q 018246 251 IIDTVSAVHSLAPL-LGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMK-ETQ--EMLDFCAKHNI-AA-- 323 (359)
Q Consensus 251 vid~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~-~~~--~~~~~l~~g~i-~~-- 323 (359)
|++|+|...+++.. ++.++++|.++.+|.. ..+++...+..+++++.++..+... +|. +.+.++.+|++ ..
T Consensus 261 VI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~ 338 (413)
T cd00401 261 FVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGC 338 (413)
T ss_pred EEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCcc
Confidence 99999998878765 9999999999999965 4678888888899999988776433 455 79999999998 32
Q ss_pred cE-EE-----Eccc-cHHHHHHHHHcCCcc-EEEEEEcC
Q 018246 324 DI-EL-----VRMD-QINTAMERLAKSDVK-YRFVIDVG 354 (359)
Q Consensus 324 ~~-~~-----~~l~-~~~~a~~~~~~~~~~-gkvvv~~~ 354 (359)
.+ |. ++|+ |+.++++.+.++... -|+++.++
T Consensus 339 ~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 339 ATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred cCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 22 55 7899 999999999876542 46666544
No 130
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.50 E-value=4.2e-14 Score=111.75 Aligned_cols=117 Identities=26% Similarity=0.351 Sum_probs=80.0
Q ss_pred cCCcEEecCCCHHHHHHhcCCccEEEECCC--ChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecC
Q 018246 227 LGADAFLVSSDPAKVKAAMGTMDYIIDTVS--AVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVG 304 (359)
Q Consensus 227 ~g~~~v~~~~~~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~ 304 (359)
+|+++++|++..+. .-.+++|+|||++| +...+..++++| ++|+++.++. .........+...+.+....
T Consensus 1 LGAd~vidy~~~~~--~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----~~~~~~~~~~~~~~~~~~~~ 72 (127)
T PF13602_consen 1 LGADEVIDYRDTDF--AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----DLPSFARRLKGRSIRYSFLF 72 (127)
T ss_dssp CT-SEEEETTCSHH--HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----HHHHHHHHHHCHHCEEECCC
T ss_pred CCcCEEecCCCccc--cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----cccchhhhhcccceEEEEEE
Confidence 68999999996555 22459999999999 666457778888 9999999974 11111111223333333332
Q ss_pred -------CHHHHHHHHHHHHhCCCcccE-EEEccccHHHHHHHHHcCCccEEEEE
Q 018246 305 -------GMKETQEMLDFCAKHNIAADI-ELVRMDQINTAMERLAKSDVKYRFVI 351 (359)
Q Consensus 305 -------~~~~~~~~~~~l~~g~i~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvv 351 (359)
..+.++++++++++|++++.+ ++|||+++.+|++.+.+++..||+||
T Consensus 73 ~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 73 SVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp -H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 124499999999999999998 69999999999999999999999997
No 131
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.42 E-value=5.6e-12 Score=120.27 Aligned_cols=141 Identities=18% Similarity=0.197 Sum_probs=109.5
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCH-------------HHH---HHh
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAF-LVSSDP-------------AKV---KAA 244 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v-~~~~~~-------------~~~---~~~ 244 (359)
.++++|+|+|+|++|+++++.|+.+|++|++++.+++|++.+ +++|++.+ ++..+. +.. .+.
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~a-eslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~ 241 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQV-ESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL 241 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence 689999999999999999999999999999999999999988 88999854 554321 111 111
Q ss_pred ----cCCccEEEECCCCh-----hhH-HHHHhccccCCEEEEecCCC-CC--eeeCHHHHHh-cCcEEEEeecCCHHHHH
Q 018246 245 ----MGTMDYIIDTVSAV-----HSL-APLLGLLKVNGKLVTVGLPE-KP--LEVPIFALVG-ARRLVGGSNVGGMKETQ 310 (359)
Q Consensus 245 ----~~~~d~vid~~g~~-----~~~-~~~~~~l~~~G~~v~~g~~~-~~--~~~~~~~~~~-k~~~i~g~~~~~~~~~~ 310 (359)
.+++|+||+|++.+ ..+ +..++.++++|+++++|... +. .+.+...++. +++++.|......+...
T Consensus 242 ~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p~ 321 (509)
T PRK09424 242 FAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLPT 321 (509)
T ss_pred HHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHHH
Confidence 14799999999963 343 89999999999999999853 33 4455556665 89999998765544344
Q ss_pred HHHHHHHhCCCcc
Q 018246 311 EMLDFCAKHNIAA 323 (359)
Q Consensus 311 ~~~~~l~~g~i~~ 323 (359)
++.+++.++.++.
T Consensus 322 ~As~lla~~~i~l 334 (509)
T PRK09424 322 QSSQLYGTNLVNL 334 (509)
T ss_pred HHHHHHHhCCccH
Confidence 6899999988753
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.79 E-value=6e-08 Score=86.97 Aligned_cols=165 Identities=18% Similarity=0.235 Sum_probs=101.4
Q ss_pred CCCCCCEEEEECCchHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHH---cCCcEEecCCCHHHHHHh---cCCccEE
Q 018246 180 MTEPGKHLGVAGLGGLGHVAVKIGKAFGL--KVTVISTSPKKESEAISK---LGADAFLVSSDPAKVKAA---MGTMDYI 251 (359)
Q Consensus 180 ~~~~g~~VlI~G~g~vG~~a~~la~~~g~--~V~~v~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~---~~~~d~v 251 (359)
.+++|++||.+|+|. |..+.++++..|. +|++++.+++.++.+.+. ++...+-.... .+..+ .+.+|+|
T Consensus 74 ~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~--d~~~l~~~~~~fD~V 150 (272)
T PRK11873 74 ELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLG--EIEALPVADNSVDVI 150 (272)
T ss_pred cCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEc--chhhCCCCCCceeEE
Confidence 358999999999988 8888888888775 799999999988877332 34322211111 12222 1379999
Q ss_pred EECC------CChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCcc--
Q 018246 252 IDTV------SAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAA-- 323 (359)
Q Consensus 252 id~~------g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~-- 323 (359)
+... .....+..+.+.|+|+|+++..+..... +++ ..+.+...+.+.........+++.+++++..+..
T Consensus 151 i~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~e~~~~l~~aGf~~v~ 227 (272)
T PRK11873 151 ISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-ELP--EEIRNDAELYAGCVAGALQEEEYLAMLAEAGFVDIT 227 (272)
T ss_pred EEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-CCC--HHHHHhHHHHhccccCCCCHHHHHHHHHHCCCCceE
Confidence 8543 2234689999999999999987654321 111 1122222222222222233456667777654432
Q ss_pred -cE-EEEccccHHHHHHHH--HcCCccEEEE
Q 018246 324 -DI-ELVRMDQINTAMERL--AKSDVKYRFV 350 (359)
Q Consensus 324 -~~-~~~~l~~~~~a~~~~--~~~~~~gkvv 350 (359)
.. ..++++++.++++.+ .++...++.+
T Consensus 228 i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 258 (272)
T PRK11873 228 IQPKREYRIPDAREFLEDWGIAPGRQLDGYI 258 (272)
T ss_pred EEeccceecccHHHHHHHhccccccccCceE
Confidence 22 567899999999988 5544444444
No 133
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.68 E-value=4.5e-07 Score=85.08 Aligned_cols=107 Identities=18% Similarity=0.231 Sum_probs=84.2
Q ss_pred hhhhhHhHhc-CCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCC
Q 018246 169 ITVYSPMKYY-GMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGT 247 (359)
Q Consensus 169 ~ta~~~l~~~-~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 247 (359)
..+|.++... ...-.|++|+|+|.|.+|+.+++.++.+|++|+++++++.+...+ ...|+. +.+ +.++..+
T Consensus 196 ~s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A-~~~G~~-v~~------l~eal~~ 267 (425)
T PRK05476 196 ESLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQA-AMDGFR-VMT------MEEAAEL 267 (425)
T ss_pred hhhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHH-HhcCCE-ecC------HHHHHhC
Confidence 4456666666 333489999999999999999999999999999999998887666 455654 221 2334458
Q ss_pred ccEEEECCCChhhHH-HHHhccccCCEEEEecCCCCC
Q 018246 248 MDYIIDTVSAVHSLA-PLLGLLKVNGKLVTVGLPEKP 283 (359)
Q Consensus 248 ~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~ 283 (359)
+|+|++++|....++ ..+..|++++.++.+|.....
T Consensus 268 aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~E 304 (425)
T PRK05476 268 GDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDNE 304 (425)
T ss_pred CCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCCc
Confidence 999999999887675 688999999999999876643
No 134
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.68 E-value=2.8e-07 Score=88.12 Aligned_cols=121 Identities=19% Similarity=0.199 Sum_probs=86.6
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCC-------------HHH-------
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAF-LVSSD-------------PAK------- 240 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v-~~~~~-------------~~~------- 240 (359)
.++++|+|+|+|.+|++++++++.+|++|+++++++++++.+ +++|++.+ ++..+ .+.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a-~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467899999999999999999999999999999999999888 78998763 22211 111
Q ss_pred HHHhcCCccEEEECC---CChh---hHHHHHhccccCCEEEEecCCCC-CeeeC--HHHHH-hcCcEEEEeec
Q 018246 241 VKAAMGTMDYIIDTV---SAVH---SLAPLLGLLKVNGKLVTVGLPEK-PLEVP--IFALV-GARRLVGGSNV 303 (359)
Q Consensus 241 ~~~~~~~~d~vid~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~~-~~~~~--~~~~~-~k~~~i~g~~~ 303 (359)
..+...++|++|+|+ |.+. +.+..++.|++|+.+++++...+ +..+. ...+. ..++++.+...
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~n 313 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYTD 313 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeCC
Confidence 122234899999999 5432 56788999999999999976553 33222 11111 13477776444
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.68 E-value=9.2e-07 Score=79.93 Aligned_cols=120 Identities=17% Similarity=0.196 Sum_probs=89.5
Q ss_pred HhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEE
Q 018246 174 PMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIID 253 (359)
Q Consensus 174 ~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid 253 (359)
++.....--.+++|+|+|.|.+|+.+++.++.+|++|++.++++++.+.+ +++|.+.+. .+.+.+...++|+||+
T Consensus 142 a~~~~~~~l~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~-~~~G~~~~~----~~~l~~~l~~aDiVI~ 216 (296)
T PRK08306 142 AIEHTPITIHGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARI-TEMGLSPFH----LSELAEEVGKIDIIFN 216 (296)
T ss_pred HHHhCCCCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCeeec----HHHHHHHhCCCCEEEE
Confidence 33333332368999999999999999999999999999999998887777 778876432 1234455568999999
Q ss_pred CCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEE
Q 018246 254 TVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGG 300 (359)
Q Consensus 254 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g 300 (359)
+++........++.+++++.+++++...+...+. ..-.++++..+
T Consensus 217 t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~~--~a~~~Gv~~~~ 261 (296)
T PRK08306 217 TIPALVLTKEVLSKMPPEALIIDLASKPGGTDFE--YAEKRGIKALL 261 (296)
T ss_pred CCChhhhhHHHHHcCCCCcEEEEEccCCCCcCee--ehhhCCeEEEE
Confidence 9987654567788999999999998876554442 23335556654
No 136
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.48 E-value=2.1e-06 Score=80.10 Aligned_cols=103 Identities=18% Similarity=0.203 Sum_probs=80.8
Q ss_pred hhhHhHhc-CCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCcc
Q 018246 171 VYSPMKYY-GMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMD 249 (359)
Q Consensus 171 a~~~l~~~-~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d 249 (359)
++.++.+. .....|++|+|+|.|.+|+.+++.++.+|++|++++.++.+...+ ...|+. +.+. .+...+.|
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A-~~~G~~-v~~l------eeal~~aD 252 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEA-AMDGFR-VMTM------EEAAKIGD 252 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHH-HhcCCE-eCCH------HHHHhcCC
Confidence 34555444 334689999999999999999999999999999999998887666 566763 2221 22335789
Q ss_pred EEEECCCChhhHH-HHHhccccCCEEEEecCCC
Q 018246 250 YIIDTVSAVHSLA-PLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 250 ~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~ 281 (359)
++|+++|....++ ..+..+++++.++.+|...
T Consensus 253 VVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 253 IFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 9999999988776 4899999999999998764
No 137
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.44 E-value=2.7e-06 Score=79.30 Aligned_cols=99 Identities=19% Similarity=0.286 Sum_probs=77.0
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCC---C--
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVS---A-- 257 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g---~-- 257 (359)
++.+|+|+|+|.+|+.+++.++.+|++|+++++++++.+.+.+.++........+.+.+.+....+|++|++++ .
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~~ 245 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAKA 245 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCCC
Confidence 34569999999999999999999999999999999988887566765433334444556666678999999973 2
Q ss_pred hh-hHHHHHhccccCCEEEEecCCC
Q 018246 258 VH-SLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 258 ~~-~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+. .....++.+++++.+++++...
T Consensus 246 p~lit~~~l~~mk~g~vIvDva~d~ 270 (370)
T TIGR00518 246 PKLVSNSLVAQMKPGAVIVDVAIDQ 270 (370)
T ss_pred CcCcCHHHHhcCCCCCEEEEEecCC
Confidence 22 2367888899999999998654
No 138
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.44 E-value=2.1e-08 Score=95.06 Aligned_cols=163 Identities=15% Similarity=0.211 Sum_probs=106.4
Q ss_pred cccccccEEEEEeCCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCc
Q 018246 69 VPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHY 148 (359)
Q Consensus 69 ~~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~ 148 (359)
--|.|+++.+.+|++++++ +|++.+.. |+.|.+| ++.|...... |...++.|++++.++. .
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI--~gQvk~a----~~~a~~~~~~-------g~~l~~lf~~a~~~~k-~ 149 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI--LGQVKNA----YKVAQEEKTV-------GKVLERLFQKAFSVGK-R 149 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH--HHHHHHH----HHHHHHcCCc-------hHHHHHHHHHHHHHhh-h
Confidence 4689999999999999887 44444443 6666666 5556555433 3345688999988875 3
Q ss_pred eEECCCCCCccccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHc
Q 018246 149 VLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKL 227 (359)
Q Consensus 149 ~~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~ 227 (359)
+.. -..++ .. .++.+..+.-.+....+. .++++|+|+|+|.+|..+++.++..|+ +|++++++.++.+.+.+++
T Consensus 150 vr~-~t~i~-~~--~vSv~~~Av~la~~~~~~-l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~ 224 (417)
T TIGR01035 150 VRT-ETDIS-AG--AVSISSAAVELAERIFGS-LKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL 224 (417)
T ss_pred hhh-hcCCC-CC--CcCHHHHHHHHHHHHhCC-ccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence 332 01111 01 111111111112222333 578999999999999999999999995 8999999998877666778
Q ss_pred CCcEEecCCCHHHHHHhcCCccEEEECCCChh
Q 018246 228 GADAFLVSSDPAKVKAAMGTMDYIIDTVSAVH 259 (359)
Q Consensus 228 g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 259 (359)
|...+ +. +.+.+...++|+||.|++.+.
T Consensus 225 g~~~i-~~---~~l~~~l~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 225 GGEAV-KF---EDLEEYLAEADIVISSTGAPH 252 (417)
T ss_pred CCeEe-eH---HHHHHHHhhCCEEEECCCCCC
Confidence 76432 22 233444458999999998765
No 139
>PLN02494 adenosylhomocysteinase
Probab=98.44 E-value=3.2e-06 Score=79.69 Aligned_cols=102 Identities=18% Similarity=0.208 Sum_probs=80.2
Q ss_pred hhHhHhc-CCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccE
Q 018246 172 YSPMKYY-GMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDY 250 (359)
Q Consensus 172 ~~~l~~~-~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~ 250 (359)
+.++.+. ...-.|++|+|+|.|.+|+.+++.++.+|++|+++++++.+...+ ...|+..+ + +.++....|+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA-~~~G~~vv-~------leEal~~ADV 312 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQA-LMEGYQVL-T------LEDVVSEADI 312 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHH-HhcCCeec-c------HHHHHhhCCE
Confidence 4454444 333679999999999999999999999999999999988776565 55676532 1 2233456899
Q ss_pred EEECCCChhhH-HHHHhccccCCEEEEecCCC
Q 018246 251 IIDTVSAVHSL-APLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 251 vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~ 281 (359)
++.+.|....+ ...++.|++++.++.+|...
T Consensus 313 VI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 313 FVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred EEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 99999988754 78999999999999998754
No 140
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.32 E-value=7.5e-06 Score=72.37 Aligned_cols=129 Identities=21% Similarity=0.296 Sum_probs=83.2
Q ss_pred cceEEEeeCCceEECCCCCCccccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCC
Q 018246 138 YSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTS 216 (359)
Q Consensus 138 ~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~ 216 (359)
|.+|.. +...++.+++++++..+.. +.+.. .+..+... ..++++||.+|+|. |..++.+++ .|+ +|++++.+
T Consensus 79 ~~~~~~-~~~~~i~i~p~~afgtg~h-~tt~~-~l~~l~~~--~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis 151 (250)
T PRK00517 79 WEDPPD-PDEINIELDPGMAFGTGTH-PTTRL-CLEALEKL--VLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDID 151 (250)
T ss_pred CcCCCC-CCeEEEEECCCCccCCCCC-HHHHH-HHHHHHhh--cCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECC
Confidence 555544 6778899999988887642 21111 12233322 36889999999987 877776554 677 69999999
Q ss_pred hhhHHHHHHHc---CC-cEEecCCCHHHHHHhcCCccEEEECCCChh---hHHHHHhccccCCEEEEecCC
Q 018246 217 PKKESEAISKL---GA-DAFLVSSDPAKVKAAMGTMDYIIDTVSAVH---SLAPLLGLLKVNGKLVTVGLP 280 (359)
Q Consensus 217 ~~~~~~~~~~~---g~-~~v~~~~~~~~~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~~ 280 (359)
+...+.+.+.. +. ..+..... ...||+|+.+..... .+..+.+.|+++|.++..|..
T Consensus 152 ~~~l~~A~~n~~~~~~~~~~~~~~~-------~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~ 215 (250)
T PRK00517 152 PQAVEAARENAELNGVELNVYLPQG-------DLKADVIVANILANPLLELAPDLARLLKPGGRLILSGIL 215 (250)
T ss_pred HHHHHHHHHHHHHcCCCceEEEccC-------CCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence 99887774332 22 11110000 015899987665432 356788899999999987654
No 141
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.32 E-value=3.5e-07 Score=90.56 Aligned_cols=121 Identities=20% Similarity=0.176 Sum_probs=77.9
Q ss_pred CCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCC---------------------hhhHHHHHHHcCCcEEecCCC-H
Q 018246 181 TEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTS---------------------PKKESEAISKLGADAFLVSSD-P 238 (359)
Q Consensus 181 ~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~---------------------~~~~~~~~~~~g~~~v~~~~~-~ 238 (359)
..+|++|+|+|+|++|+++++.++..|++|+++++. +.+++.+ +++|++..++... .
T Consensus 134 ~~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~-~~~Gv~~~~~~~~~~ 212 (564)
T PRK12771 134 PDTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRI-LDLGVEVRLGVRVGE 212 (564)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHH-HHCCCEEEeCCEECC
Confidence 478999999999999999999999999999999853 2345556 6899877666432 1
Q ss_pred H-HHHHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeec
Q 018246 239 A-KVKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNV 303 (359)
Q Consensus 239 ~-~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~ 303 (359)
+ .......++|+||+++|........+......|.+..++......... .....+++.+.|...
T Consensus 213 ~~~~~~~~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~~l~~~~~~~-~~~~gk~v~ViGgg~ 277 (564)
T PRK12771 213 DITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVDFLRAVGEGE-PPFLGKRVVVIGGGN 277 (564)
T ss_pred cCCHHHHHhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHHHHHHHhhccC-CcCCCCCEEEECChH
Confidence 1 122333479999999998653343444455556555443322111111 122356677776443
No 142
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.25 E-value=2.6e-05 Score=70.10 Aligned_cols=111 Identities=18% Similarity=0.189 Sum_probs=82.0
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhhH
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSL 261 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 261 (359)
-.|++++|+|.|.+|.+++..++.+|++|++.++++++.+.+ .++|...+ . .+.+.+...+.|+|+++++....-
T Consensus 149 l~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~-~~~g~~~~-~---~~~l~~~l~~aDiVint~P~~ii~ 223 (287)
T TIGR02853 149 IHGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARI-TEMGLIPF-P---LNKLEEKVAEIDIVINTIPALVLT 223 (287)
T ss_pred CCCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCeee-c---HHHHHHHhccCCEEEECCChHHhC
Confidence 368899999999999999999999999999999998887766 56665432 1 223445556899999999765423
Q ss_pred HHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEE
Q 018246 262 APLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVG 299 (359)
Q Consensus 262 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~ 299 (359)
...++.++++..+++++...+...| ...-.++++..
T Consensus 224 ~~~l~~~k~~aliIDlas~Pg~tdf--~~Ak~~G~~a~ 259 (287)
T TIGR02853 224 ADVLSKLPKHAVIIDLASKPGGTDF--EYAKKRGIKAL 259 (287)
T ss_pred HHHHhcCCCCeEEEEeCcCCCCCCH--HHHHHCCCEEE
Confidence 5677889999999999887655444 33223444444
No 143
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.25 E-value=3.9e-06 Score=76.58 Aligned_cols=109 Identities=18% Similarity=0.241 Sum_probs=80.5
Q ss_pred CceEECCCCCCccccccccchhhhhhhHhHhcCCC---CCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHH
Q 018246 147 HYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMT---EPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESE 222 (359)
Q Consensus 147 ~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~~~---~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~ 222 (359)
...+++|+.+..+.++... +...++.++...... -++.+|+|+|+|.+|+.+++.++..|+ +|+++++++++.+.
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 4567888988888876543 334445566544331 378999999999999999999998886 89999999998777
Q ss_pred HHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhh
Q 018246 223 AISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHS 260 (359)
Q Consensus 223 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 260 (359)
+.+++|.. +++. +.+.+.....|+||.|++.+..
T Consensus 218 la~~~g~~-~~~~---~~~~~~l~~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPL---DELLELLNEADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeH---HHHHHHHhcCCEEEECCCCCch
Confidence 76888874 3322 2233444578999999998773
No 144
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.13 E-value=2.4e-05 Score=74.06 Aligned_cols=98 Identities=18% Similarity=0.275 Sum_probs=77.8
Q ss_pred HhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECC
Q 018246 176 KYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTV 255 (359)
Q Consensus 176 ~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~ 255 (359)
+..+..-.|++|+|+|.|.+|..+++.++.+|++|+++++++.+...+ ...|+..+ .+.++....|+|+.+.
T Consensus 246 R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A-~~~G~~~~-------~leell~~ADIVI~at 317 (476)
T PTZ00075 246 RATDVMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQA-AMEGYQVV-------TLEDVVETADIFVTAT 317 (476)
T ss_pred HhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHH-HhcCceec-------cHHHHHhcCCEEEECC
Confidence 333444689999999999999999999999999999998887776555 34565432 1334456899999999
Q ss_pred CChhhHH-HHHhccccCCEEEEecCCC
Q 018246 256 SAVHSLA-PLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 256 g~~~~~~-~~~~~l~~~G~~v~~g~~~ 281 (359)
|....++ ..+..|++++.++.+|...
T Consensus 318 Gt~~iI~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 318 GNKDIITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred CcccccCHHHHhccCCCcEEEEcCCCc
Confidence 9877664 8999999999999998764
No 145
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.10 E-value=5.2e-05 Score=64.93 Aligned_cols=105 Identities=20% Similarity=0.331 Sum_probs=75.8
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC----cEEecCCCHHHH----HHh---cCCccE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGA----DAFLVSSDPAKV----KAA---MGTMDY 250 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~----~~v~~~~~~~~~----~~~---~~~~d~ 250 (359)
.++.++|.|+ +++|.+.++.....|++|+.++|..+|++.+..+++. ...+|-++.+.+ ..+ .+.+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 4578899997 9999999999999999999999999999999889983 234565665432 222 247999
Q ss_pred EEECCCChh-------------------------hHHHHHhcc--ccCCEEEEecCCCCCeeeC
Q 018246 251 IIDTVSAVH-------------------------SLAPLLGLL--KVNGKLVTVGLPEKPLEVP 287 (359)
Q Consensus 251 vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~ 287 (359)
.+++.|... ..+..+..| +..|.++.+|+..+..+++
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~ 148 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYP 148 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCC
Confidence 999998531 111222222 3468999998877544443
No 146
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.07 E-value=8e-06 Score=64.93 Aligned_cols=96 Identities=18% Similarity=0.316 Sum_probs=68.0
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCc--EEecCCCHHHHHHhcCCccEEEECCCCh
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGAD--AFLVSSDPAKVKAAMGTMDYIIDTVSAV 258 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~d~vid~~g~~ 258 (359)
-.+.+++|+|+|++|.+++..+...|+ +|+++.|+.+|.+.+.++++.. .+++.++ +.+....+|++|+|++..
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~---~~~~~~~~DivI~aT~~~ 86 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED---LEEALQEADIVINATPSG 86 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG---HCHHHHTESEEEE-SSTT
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH---HHHHHhhCCeEEEecCCC
Confidence 368899999999999999999999999 6999999999999988888532 3344433 223345799999999876
Q ss_pred hh--HHHHHhcccc-CCEEEEecCC
Q 018246 259 HS--LAPLLGLLKV-NGKLVTVGLP 280 (359)
Q Consensus 259 ~~--~~~~~~~l~~-~G~~v~~g~~ 280 (359)
+. -...+....+ -+.+++++.+
T Consensus 87 ~~~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 87 MPIITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp STSSTHHHHTTTCHHCSEEEES-SS
T ss_pred CcccCHHHHHHHHhhhhceeccccC
Confidence 41 1233333322 2578888654
No 147
>PRK08324 short chain dehydrogenase; Validated
Probab=98.05 E-value=3.4e-05 Score=78.21 Aligned_cols=135 Identities=19% Similarity=0.226 Sum_probs=89.4
Q ss_pred CccceEEEeeCCceEECCCCCCccccccccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEe
Q 018246 136 GGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVIS 214 (359)
Q Consensus 136 g~~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~ 214 (359)
-++++|..+|+..++.+ +..+.+++...... ....-+|+++||.|+ |++|+.+++.+...|++|++++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~ 453 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLAD 453 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEe
Confidence 45567777777777766 55565665311000 111136789999985 9999999999999999999999
Q ss_pred CChhhHHHHHHHcCC-----cEEecCCCHHHHHHh-------cCCccEEEECCCCh------------------------
Q 018246 215 TSPKKESEAISKLGA-----DAFLVSSDPAKVKAA-------MGTMDYIIDTVSAV------------------------ 258 (359)
Q Consensus 215 ~~~~~~~~~~~~~g~-----~~v~~~~~~~~~~~~-------~~~~d~vid~~g~~------------------------ 258 (359)
+++++.+.+.+.++. ....|..+.+.+.++ .+++|++|+++|..
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~ 533 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGH 533 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence 999887776555543 122355555433332 24799999999831
Q ss_pred -hhHHHHHhcccc---CCEEEEecCCC
Q 018246 259 -HSLAPLLGLLKV---NGKLVTVGLPE 281 (359)
Q Consensus 259 -~~~~~~~~~l~~---~G~~v~~g~~~ 281 (359)
..++.+.+.++. +|+++.++...
T Consensus 534 ~~l~~~~~~~l~~~~~~g~iV~vsS~~ 560 (681)
T PRK08324 534 FLVAREAVRIMKAQGLGGSIVFIASKN 560 (681)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence 123444556655 68999987644
No 148
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.77 E-value=0.00014 Score=69.33 Aligned_cols=160 Identities=18% Similarity=0.213 Sum_probs=101.3
Q ss_pred cccccccEEEEEeCCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCcccccccccccCCCCCCCCccceEEEeeCCc
Q 018246 69 VPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHY 148 (359)
Q Consensus 69 ~~G~e~~G~V~~vG~~v~~~~vGdrV~v~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~a~~~~~~~~~ 148 (359)
--|+|+++.+.+|++++++.-+|+.= .|.+|+ +.++.|...... |...++.|++.+.++
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~q----------IlgQvk-~a~~~a~~~g~~-------g~~l~~lf~~a~~~~--- 149 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQ----------ILGQVK-DAYALAQEAGTV-------GTILNRLFQKAFSVA--- 149 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChH----------HHHHHH-HHHHHHHHcCCc-------hHHHHHHHHHHHHHH---
Confidence 36999999999999998874444432 245555 223333333211 222345666555444
Q ss_pred eEECCCCCCccccccccchhhhhhhHhHhcCC---CCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHH
Q 018246 149 VLRFPDNMPLDAGAPLLCAGITVYSPMKYYGM---TEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAI 224 (359)
Q Consensus 149 ~~~lp~~l~~~~aa~l~~~~~ta~~~l~~~~~---~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~ 224 (359)
+.+..+.+. ...+...++.++..... -.++++|+|+|+|.+|.++++.++..|+ +|+++++++++.+.+.
T Consensus 150 -----k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la 223 (423)
T PRK00045 150 -----KRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELA 223 (423)
T ss_pred -----hhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence 332222221 11123333445543322 1578999999999999999999999998 8999999999987676
Q ss_pred HHcCCcEEecCCCHHHHHHhcCCccEEEECCCChh
Q 018246 225 SKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVH 259 (359)
Q Consensus 225 ~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 259 (359)
+++|.+ +++. +...+...++|+||+|++.+.
T Consensus 224 ~~~g~~-~~~~---~~~~~~l~~aDvVI~aT~s~~ 254 (423)
T PRK00045 224 EEFGGE-AIPL---DELPEALAEADIVISSTGAPH 254 (423)
T ss_pred HHcCCc-EeeH---HHHHHHhccCCEEEECCCCCC
Confidence 888864 3322 223344468999999998765
No 149
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=97.73 E-value=0.00023 Score=62.76 Aligned_cols=98 Identities=20% Similarity=0.289 Sum_probs=79.6
Q ss_pred CEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCC--C----h
Q 018246 185 KHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVS--A----V 258 (359)
Q Consensus 185 ~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g--~----~ 258 (359)
.+|.|+|.|.+|.-++.+|.-+|++|++.+.+.+|++.+-..|+.+--.-++....+++...+.|++|.++= + .
T Consensus 169 ~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgakaPk 248 (371)
T COG0686 169 AKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAPK 248 (371)
T ss_pred ccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCCce
Confidence 458888999999999999999999999999999999999666776533345667778888889999998662 1 1
Q ss_pred hhHHHHHhccccCCEEEEecCCCC
Q 018246 259 HSLAPLLGLLKVNGKLVTVGLPEK 282 (359)
Q Consensus 259 ~~~~~~~~~l~~~G~~v~~g~~~~ 282 (359)
...+..++.|+|++.++++...++
T Consensus 249 Lvt~e~vk~MkpGsVivDVAiDqG 272 (371)
T COG0686 249 LVTREMVKQMKPGSVIVDVAIDQG 272 (371)
T ss_pred ehhHHHHHhcCCCcEEEEEEEcCC
Confidence 256788999999999999976553
No 150
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.71 E-value=0.00042 Score=64.22 Aligned_cols=99 Identities=22% Similarity=0.273 Sum_probs=79.1
Q ss_pred CEEEEECCchHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcC--C-cEEecCCCHHHHHHhcCCccEEEECCCChhh
Q 018246 185 KHLGVAGLGGLGHVAVKIGKAFG-LKVTVISTSPKKESEAISKLG--A-DAFLVSSDPAKVKAAMGTMDYIIDTVSAVHS 260 (359)
Q Consensus 185 ~~VlI~G~g~vG~~a~~la~~~g-~~V~~v~~~~~~~~~~~~~~g--~-~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 260 (359)
.+|||+|+|.+|+.+++.+.+.| .+|++.+|+.++.+.+....+ . ...+|-.+.+.+.++..++|+||++.+....
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~ 81 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD 81 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhh
Confidence 46999999999999999988888 599999999999888844332 2 4567777777788888888999999998876
Q ss_pred HHHHHhccccCCEEEEecCCCCC
Q 018246 261 LAPLLGLLKVNGKLVTVGLPEKP 283 (359)
Q Consensus 261 ~~~~~~~l~~~G~~v~~g~~~~~ 283 (359)
+..+-.|++.+=.+++.......
T Consensus 82 ~~i~ka~i~~gv~yvDts~~~~~ 104 (389)
T COG1748 82 LTILKACIKTGVDYVDTSYYEEP 104 (389)
T ss_pred HHHHHHHHHhCCCEEEcccCCch
Confidence 66666777888888888665433
No 151
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.67 E-value=0.00094 Score=56.79 Aligned_cols=97 Identities=19% Similarity=0.219 Sum_probs=68.3
Q ss_pred CCCCCCEEEEECCchHHHHHHHHHHHCC--CeEEEEeCChhhHHHHH---HHcC-CcE--EecCCCHHHHHHhcCCccEE
Q 018246 180 MTEPGKHLGVAGLGGLGHVAVKIGKAFG--LKVTVISTSPKKESEAI---SKLG-ADA--FLVSSDPAKVKAAMGTMDYI 251 (359)
Q Consensus 180 ~~~~g~~VlI~G~g~vG~~a~~la~~~g--~~V~~v~~~~~~~~~~~---~~~g-~~~--v~~~~~~~~~~~~~~~~d~v 251 (359)
.+.++++||.+|+|. |.+++.+++..+ .+|++++.+++..+.+. +.+| .+. ++..+..+.+....+.+|.|
T Consensus 37 ~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~~D~V 115 (198)
T PRK00377 37 RLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEKFDRI 115 (198)
T ss_pred CCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCCCCEE
Confidence 348999999999988 888899988764 48999999998877652 3455 222 22222223333444589999
Q ss_pred EECCCC---hhhHHHHHhccccCCEEEEe
Q 018246 252 IDTVSA---VHSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 252 id~~g~---~~~~~~~~~~l~~~G~~v~~ 277 (359)
+...+. ...+..+.+.|+|+|+++..
T Consensus 116 ~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (198)
T PRK00377 116 FIGGGSEKLKEIISASWEIIKKGGRIVID 144 (198)
T ss_pred EECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence 986543 23577888999999999853
No 152
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.66 E-value=0.001 Score=54.83 Aligned_cols=96 Identities=21% Similarity=0.243 Sum_probs=68.2
Q ss_pred CCCCCEEEEECCchHHHHHHHHHHHC-CCeEEEEeCChhhHHHH---HHHcCCc--EEecCCCHHHHHHhcCCccEEEEC
Q 018246 181 TEPGKHLGVAGLGGLGHVAVKIGKAF-GLKVTVISTSPKKESEA---ISKLGAD--AFLVSSDPAKVKAAMGTMDYIIDT 254 (359)
Q Consensus 181 ~~~g~~VlI~G~g~vG~~a~~la~~~-g~~V~~v~~~~~~~~~~---~~~~g~~--~v~~~~~~~~~~~~~~~~d~vid~ 254 (359)
+++|+.++-+|+|. |..++++|+.. ..+|+++++++++.+.. +++||.+ .++..+.++.+..+. .+|.+|--
T Consensus 32 ~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~daiFIG 109 (187)
T COG2242 32 PRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPDAIFIG 109 (187)
T ss_pred CCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCCEEEEC
Confidence 48999887788753 55667777443 34999999999876554 4578866 455555555555433 79999975
Q ss_pred CCCh--hhHHHHHhccccCCEEEEec
Q 018246 255 VSAV--HSLAPLLGLLKVNGKLVTVG 278 (359)
Q Consensus 255 ~g~~--~~~~~~~~~l~~~G~~v~~g 278 (359)
-|.. ..++.++..|+++|++|.-.
T Consensus 110 Gg~~i~~ile~~~~~l~~ggrlV~na 135 (187)
T COG2242 110 GGGNIEEILEAAWERLKPGGRLVANA 135 (187)
T ss_pred CCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence 5532 36789999999999998753
No 153
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.65 E-value=0.00066 Score=54.91 Aligned_cols=103 Identities=19% Similarity=0.304 Sum_probs=71.5
Q ss_pred cCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCC
Q 018246 178 YGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSA 257 (359)
Q Consensus 178 ~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~ 257 (359)
....-.|++++|.|-|.+|...++.++.+|++|++++.++-+.-++ .--|.... .+.++....|+++.++|.
T Consensus 17 t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA-~~dGf~v~-------~~~~a~~~adi~vtaTG~ 88 (162)
T PF00670_consen 17 TNLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQA-AMDGFEVM-------TLEEALRDADIFVTATGN 88 (162)
T ss_dssp H-S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHH-HHTT-EEE--------HHHHTTT-SEEEE-SSS
T ss_pred CceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHh-hhcCcEec-------CHHHHHhhCCEEEECCCC
Confidence 3455689999999999999999999999999999999999887666 34454422 245566788999999998
Q ss_pred hhhH-HHHHhccccCCEEEEecCCCCCeeeCHHH
Q 018246 258 VHSL-APLLGLLKVNGKLVTVGLPEKPLEVPIFA 290 (359)
Q Consensus 258 ~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 290 (359)
..++ ..-++.|+++..+..+|... ..+++..
T Consensus 89 ~~vi~~e~~~~mkdgail~n~Gh~d--~Eid~~~ 120 (162)
T PF00670_consen 89 KDVITGEHFRQMKDGAILANAGHFD--VEIDVDA 120 (162)
T ss_dssp SSSB-HHHHHHS-TTEEEEESSSST--TSBTHHH
T ss_pred ccccCHHHHHHhcCCeEEeccCcCc--eeEeecc
Confidence 7743 57789999999998888765 3444443
No 154
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.64 E-value=0.0008 Score=65.52 Aligned_cols=104 Identities=18% Similarity=0.197 Sum_probs=72.0
Q ss_pred cCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc--------C------Cc-EEecCCCHHHH
Q 018246 178 YGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL--------G------AD-AFLVSSDPAKV 241 (359)
Q Consensus 178 ~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~--------g------~~-~v~~~~~~~~~ 241 (359)
....+.|++|||.|+ |.+|..+++.+...|++|++++|+.++.+.+.+.+ | +. ...|..+.+.+
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI 153 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQI 153 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHH
Confidence 334478899999987 99999999999999999999999988876553321 2 11 12355566667
Q ss_pred HHhcCCccEEEECCCChh---------------hHHHHHhcccc--CCEEEEecCCC
Q 018246 242 KAAMGTMDYIIDTVSAVH---------------SLAPLLGLLKV--NGKLVTVGLPE 281 (359)
Q Consensus 242 ~~~~~~~d~vid~~g~~~---------------~~~~~~~~l~~--~G~~v~~g~~~ 281 (359)
....+++|+||.++|... ....+++.+.. .++||.++...
T Consensus 154 ~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 154 GPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred HHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 666779999999987531 11233444433 36899887643
No 155
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.62 E-value=0.0006 Score=51.97 Aligned_cols=93 Identities=24% Similarity=0.329 Sum_probs=65.0
Q ss_pred CCCEEEEECCchHHHHHHHHHH-HCCCeEEEEeCChhhHHHHHHHc---CC-c--EEecCCCHHHHHHhcCCccEEEECC
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGK-AFGLKVTVISTSPKKESEAISKL---GA-D--AFLVSSDPAKVKAAMGTMDYIIDTV 255 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~-~~g~~V~~v~~~~~~~~~~~~~~---g~-~--~v~~~~~~~~~~~~~~~~d~vid~~ 255 (359)
|+.+||-+|+|. |..++.+++ ..+++|++++.+++..+.+.+.. +. + .++..+- ........+||+|+...
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~~~~~D~v~~~~ 78 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDA-EFDPDFLEPFDLVICSG 78 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCC-HGGTTTSSCEEEEEECS
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECcc-ccCcccCCCCCEEEECC
Confidence 688999999865 777778887 57889999999999888886655 21 1 2222222 12222334799999877
Q ss_pred -CCh---------hhHHHHHhccccCCEEEEe
Q 018246 256 -SAV---------HSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 256 -g~~---------~~~~~~~~~l~~~G~~v~~ 277 (359)
... ..++.+.+.|+|+|+++.-
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 79 FTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp GSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 221 1367899999999998863
No 156
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.59 E-value=0.00072 Score=59.49 Aligned_cols=77 Identities=18% Similarity=0.250 Sum_probs=59.2
Q ss_pred CCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE-----E--ecCCCHHHHHHhc-------C
Q 018246 182 EPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADA-----F--LVSSDPAKVKAAM-------G 246 (359)
Q Consensus 182 ~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~-----v--~~~~~~~~~~~~~-------~ 246 (359)
..+.++||.|+ +++|...+..+...|.+|+.++|++++++.+.+++.-.+ + +|..+.+.+.++. .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 46789999997 999999999999999999999999999988866655221 2 3555554444332 2
Q ss_pred CccEEEECCCCh
Q 018246 247 TMDYIIDTVSAV 258 (359)
Q Consensus 247 ~~d~vid~~g~~ 258 (359)
.+|+.++++|..
T Consensus 84 ~IdvLVNNAG~g 95 (265)
T COG0300 84 PIDVLVNNAGFG 95 (265)
T ss_pred cccEEEECCCcC
Confidence 699999999853
No 157
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.54 E-value=0.001 Score=60.09 Aligned_cols=96 Identities=22% Similarity=0.218 Sum_probs=63.3
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHc---CCc-EEecCCCHHHHHHhcCCccEEEECCC
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKL---GAD-AFLVSSDPAKVKAAMGTMDYIIDTVS 256 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~---g~~-~v~~~~~~~~~~~~~~~~d~vid~~g 256 (359)
.++++||-+|+|. |..++.+++ .|+ +|++++.++...+.+.+.. +.. .+..... +......++||+|+....
T Consensus 158 ~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~~~~~~~~~fDlVvan~~ 234 (288)
T TIGR00406 158 LKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-YLEQPIEGKADVIVANIL 234 (288)
T ss_pred CCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-ccccccCCCceEEEEecC
Confidence 5789999999987 777777665 566 9999999998777663322 221 1111111 111112348999997654
Q ss_pred Ch---hhHHHHHhccccCCEEEEecCC
Q 018246 257 AV---HSLAPLLGLLKVNGKLVTVGLP 280 (359)
Q Consensus 257 ~~---~~~~~~~~~l~~~G~~v~~g~~ 280 (359)
.. ..+..+.+.|+|+|.++..|..
T Consensus 235 ~~~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 235 AEVIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 43 2356778999999999988754
No 158
>PRK12742 oxidoreductase; Provisional
Probab=97.52 E-value=0.0012 Score=57.46 Aligned_cols=99 Identities=20% Similarity=0.251 Sum_probs=66.7
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHHHcCCcEE-ecCCCHHHHHHhc---CCccEEEECCC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVIST-SPKKESEAISKLGADAF-LVSSDPAKVKAAM---GTMDYIIDTVS 256 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~-~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~---~~~d~vid~~g 256 (359)
.+++|||.|+ |++|..+++.+...|++|+++.+ ++++.+.+.++++...+ .|..+.+.+.+.. +.+|++++++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag 84 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG 84 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence 4679999986 99999999999999999888765 45555555455665433 3555544333332 46899999987
Q ss_pred Chh-------------------------hHHHHHhccccCCEEEEecCCC
Q 018246 257 AVH-------------------------SLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 257 ~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
... ....+...++..|+++.++...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 134 (237)
T PRK12742 85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN 134 (237)
T ss_pred CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 421 0123344566778999887643
No 159
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.51 E-value=0.00083 Score=56.11 Aligned_cols=91 Identities=25% Similarity=0.290 Sum_probs=68.3
Q ss_pred EEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEECCCCh----hh
Q 018246 187 LGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAF-LVSSDPAKVKAAMGTMDYIIDTVSAV----HS 260 (359)
Q Consensus 187 VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~d~vid~~g~~----~~ 260 (359)
|+|+|+ |.+|...++.+...|.+|++++|++++.+. ..+.+.+ .|..+.+.+.+...++|.||.+++.. ..
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~ 77 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDA 77 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcccccc
Confidence 688997 999999999999999999999999998765 3344433 34566677777778999999999842 22
Q ss_pred HHHHHhccccCC--EEEEecCC
Q 018246 261 LAPLLGLLKVNG--KLVTVGLP 280 (359)
Q Consensus 261 ~~~~~~~l~~~G--~~v~~g~~ 280 (359)
....++.++..| +++.++..
T Consensus 78 ~~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 78 AKNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp HHHHHHHHHHTTSSEEEEEEET
T ss_pred cccccccccccccccceeeecc
Confidence 556666665554 77776543
No 160
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.50 E-value=0.00041 Score=57.91 Aligned_cols=119 Identities=24% Similarity=0.376 Sum_probs=79.7
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCCh---
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAV--- 258 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~--- 258 (359)
-.|++|.|+|.|.+|...+++++.+|++|++.+++....... ...+... . .+.++....|+|+.+....
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~~~~~~----~---~l~ell~~aDiv~~~~plt~~T 105 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-DEFGVEY----V---SLDELLAQADIVSLHLPLTPET 105 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-HHTTEEE----S---SHHHHHHH-SEEEE-SSSSTTT
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhc-cccccee----e---ehhhhcchhhhhhhhhcccccc
Confidence 478999999999999999999999999999999998765533 4444421 1 2334445689999877632
Q ss_pred -h-hHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhcCcEEEEeecCCHHHHHHHHHHHHhCCCccc-EEEEcccc
Q 018246 259 -H-SLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAAD-IELVRMDQ 332 (359)
Q Consensus 259 -~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~-~~~~~l~~ 332 (359)
. .=...+..|+++..+|.++-.. .-+-+.+++.+++|++.-. .+++.-|.
T Consensus 106 ~~li~~~~l~~mk~ga~lvN~aRG~------------------------~vde~aL~~aL~~g~i~ga~lDV~~~EP 158 (178)
T PF02826_consen 106 RGLINAEFLAKMKPGAVLVNVARGE------------------------LVDEDALLDALESGKIAGAALDVFEPEP 158 (178)
T ss_dssp TTSBSHHHHHTSTTTEEEEESSSGG------------------------GB-HHHHHHHHHTTSEEEEEESS-SSSS
T ss_pred ceeeeeeeeeccccceEEEeccchh------------------------hhhhhHHHHHHhhccCceEEEECCCCCC
Confidence 1 2257788999999988875321 1234567777888888633 24554443
No 161
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.50 E-value=0.00051 Score=57.10 Aligned_cols=75 Identities=15% Similarity=0.193 Sum_probs=57.4
Q ss_pred CCCEEEEEC-CchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC--CcEEecCCCHHHHH----Hh---cCCccEEE
Q 018246 183 PGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLG--ADAFLVSSDPAKVK----AA---MGTMDYII 252 (359)
Q Consensus 183 ~g~~VlI~G-~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g--~~~v~~~~~~~~~~----~~---~~~~d~vi 252 (359)
-|.+|||.| ++++|+..++-...+|-+|++.+|++++++++..... .+.+.|-.+.+.+. ++ ....++++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 478999986 5999999999999999999999999999999955554 35566655543222 22 23789999
Q ss_pred ECCCC
Q 018246 253 DTVSA 257 (359)
Q Consensus 253 d~~g~ 257 (359)
+++|-
T Consensus 84 NNAGI 88 (245)
T COG3967 84 NNAGI 88 (245)
T ss_pred ecccc
Confidence 98873
No 162
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.45 E-value=0.0016 Score=56.78 Aligned_cols=99 Identities=21% Similarity=0.270 Sum_probs=68.1
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE--ecCCCHHHHHHh-------cCCcc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GADAF--LVSSDPAKVKAA-------MGTMD 249 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~~v--~~~~~~~~~~~~-------~~~~d 249 (359)
++++|+|.|+ |.+|..+++.+...|++|+++++++++.+.+.++. +..+. .|..+.+.+.++ .+++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999986 99999999999999999999999988776653332 22122 244444333322 24689
Q ss_pred EEEECCCCh-----------------------hhHHHHHhccccCCEEEEecCCC
Q 018246 250 YIIDTVSAV-----------------------HSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 250 ~vid~~g~~-----------------------~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
.++.+.+.. ..++....+++++|+++.++...
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 999888742 11344556667789999887653
No 163
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.43 E-value=0.002 Score=53.95 Aligned_cols=107 Identities=21% Similarity=0.266 Sum_probs=75.8
Q ss_pred CCCEEEEEC-C-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC-cEEecCCCHHHHHHhc--------CCccEE
Q 018246 183 PGKHLGVAG-L-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGA-DAFLVSSDPAKVKAAM--------GTMDYI 251 (359)
Q Consensus 183 ~g~~VlI~G-~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~--------~~~d~v 251 (359)
....|||.| + |++|.+.+.-..+.|++|+++.|.-++...+..++|. ..-+|-.+++.+.... +..|+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 446799987 3 9999999888888999999999999999999668884 3445665554433321 378999
Q ss_pred EECCCChh----------h--------------HHHHH--hccccCCEEEEecCCCCCeeeCHH
Q 018246 252 IDTVSAVH----------S--------------LAPLL--GLLKVNGKLVTVGLPEKPLEVPIF 289 (359)
Q Consensus 252 id~~g~~~----------~--------------~~~~~--~~l~~~G~~v~~g~~~~~~~~~~~ 289 (359)
++.+|.+- . +..++ ...+..|++|.+|....-.+++..
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~ 149 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFG 149 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchh
Confidence 99887541 0 11111 244778999999987655555544
No 164
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.39 E-value=0.0014 Score=55.17 Aligned_cols=102 Identities=25% Similarity=0.292 Sum_probs=71.4
Q ss_pred HhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHH---HHHcCCcEEecCCCHHHHHHhc--CCc
Q 018246 174 PMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEA---ISKLGADAFLVSSDPAKVKAAM--GTM 248 (359)
Q Consensus 174 ~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~---~~~~g~~~v~~~~~~~~~~~~~--~~~ 248 (359)
+++... +++|++||=+|+|. |..++-+|+..| +|+.+.+.++=.+.+ .+.+|...|..... |-..... ..|
T Consensus 64 m~~~L~-~~~g~~VLEIGtGs-GY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~g-DG~~G~~~~aPy 139 (209)
T COG2518 64 MLQLLE-LKPGDRVLEIGTGS-GYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHG-DGSKGWPEEAPY 139 (209)
T ss_pred HHHHhC-CCCCCeEEEECCCc-hHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEEC-CcccCCCCCCCc
Confidence 344444 49999999999864 888999999888 999999888743333 36777643322111 1111111 379
Q ss_pred cEEEECCCChhhHHHHHhccccCCEEEEecC
Q 018246 249 DYIIDTVSAVHSLAPLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 279 (359)
|.++-+.+.+..=..++++|++||+++..-.
T Consensus 140 D~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 140 DRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred CEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 9999888887745789999999999987643
No 165
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.39 E-value=0.00096 Score=60.00 Aligned_cols=77 Identities=23% Similarity=0.183 Sum_probs=56.6
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHHhcCCccEEEECCCChh
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGAD-AFLVSSDPAKVKAAMGTMDYIIDTVSAVH 259 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 259 (359)
++++++|+|+|+.|.+++..+...|+ +|+++.|+.++.+.+.++++.. .+......+.+......+|+||+|++...
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g~ 202 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPADV 202 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCCC
Confidence 57899999999999999999999998 8999999999988887776532 11111111122233357999999987543
No 166
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.38 E-value=0.0026 Score=51.57 Aligned_cols=106 Identities=20% Similarity=0.275 Sum_probs=70.5
Q ss_pred hHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHhcCCccE
Q 018246 173 SPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFG-LKVTVISTSPKKESEAISKLGADA-FLVSSDPAKVKAAMGTMDY 250 (359)
Q Consensus 173 ~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g-~~V~~v~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~ 250 (359)
.+++..+.-..+.+++|+|+|.+|...++.+...| .+|+++++++++.+.+.++++... .....+ ..+...++|+
T Consensus 8 ~a~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv 84 (155)
T cd01065 8 RALEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADL 84 (155)
T ss_pred HHHHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCE
Confidence 34444432245788999999999999999998886 589999999988877766766431 011111 2233568999
Q ss_pred EEECCCChhh----HHHHHhccccCCEEEEecCCC
Q 018246 251 IIDTVSAVHS----LAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 251 vid~~g~~~~----~~~~~~~l~~~G~~v~~g~~~ 281 (359)
|+.|++.... .......++++..+++++...
T Consensus 85 vi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~ 119 (155)
T cd01065 85 IINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNP 119 (155)
T ss_pred EEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCC
Confidence 9999886541 111223467777788876543
No 167
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.38 E-value=0.0026 Score=53.90 Aligned_cols=99 Identities=23% Similarity=0.201 Sum_probs=65.3
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCc-EEecCCCHHHHHHhcCCccEEEECCC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL----GAD-AFLVSSDPAKVKAAMGTMDYIIDTVS 256 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~----g~~-~v~~~~~~~~~~~~~~~~d~vid~~g 256 (359)
++.+++|+|+ |.+|..++..+...|++|++++|+.++.+.+.+.+ +.. ...+..+.+.+.+...+.|+||.+++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at~ 106 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGA 106 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECCC
Confidence 6789999986 99999988888888999999999998877765544 222 12234444555555678999999887
Q ss_pred ChhhHHHHHh-ccccCCEEEEecCCC
Q 018246 257 AVHSLAPLLG-LLKVNGKLVTVGLPE 281 (359)
Q Consensus 257 ~~~~~~~~~~-~l~~~G~~v~~g~~~ 281 (359)
.......... ..+++-.++++....
T Consensus 107 ~g~~~~~~~~~~~~~~~vv~D~~~~~ 132 (194)
T cd01078 107 AGVELLEKLAWAPKPLAVAADVNAVP 132 (194)
T ss_pred CCceechhhhcccCceeEEEEccCCC
Confidence 6551111122 233333456665443
No 168
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.38 E-value=0.0029 Score=52.07 Aligned_cols=98 Identities=20% Similarity=0.271 Sum_probs=70.6
Q ss_pred cccccchhhhhhhHhHhcCCCCCCCEEEEECCch-HHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH
Q 018246 161 GAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGG-LGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPA 239 (359)
Q Consensus 161 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~-vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~ 239 (359)
....|+...++...++....--.|.+|+|+|+|. +|..++..++..|++|+++.++.+++
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l------------------- 81 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNL------------------- 81 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhH-------------------
Confidence 3455666666666666654335889999999986 59999999999999999988764322
Q ss_pred HHHHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCC
Q 018246 240 KVKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 240 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
.+....+|+||.+++.+..+.. ..++++-.+++++.+.
T Consensus 82 --~~~l~~aDiVIsat~~~~ii~~--~~~~~~~viIDla~pr 119 (168)
T cd01080 82 --KEHTKQADIVIVAVGKPGLVKG--DMVKPGAVVIDVGINR 119 (168)
T ss_pred --HHHHhhCCEEEEcCCCCceecH--HHccCCeEEEEccCCC
Confidence 2233468999999998774443 3467777778887764
No 169
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0036 Score=55.99 Aligned_cols=72 Identities=21% Similarity=0.257 Sum_probs=53.9
Q ss_pred CEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHh-------cCCccEEEECC
Q 018246 185 KHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAF-LVSSDPAKVKAA-------MGTMDYIIDTV 255 (359)
Q Consensus 185 ~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~-------~~~~d~vid~~ 255 (359)
+++||.|+ |++|...++.+...|++|+++++++++.+.+ ...+...+ .|..+.+.+.++ .+++|+++++.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL-AAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 46899886 9999999999999999999999998877666 44454433 466655443332 24799999999
Q ss_pred CC
Q 018246 256 SA 257 (359)
Q Consensus 256 g~ 257 (359)
|.
T Consensus 81 g~ 82 (274)
T PRK05693 81 GY 82 (274)
T ss_pred CC
Confidence 83
No 170
>PRK06182 short chain dehydrogenase; Validated
Probab=97.37 E-value=0.0024 Score=57.12 Aligned_cols=74 Identities=26% Similarity=0.316 Sum_probs=55.2
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHh-------cCCccEEEE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADA-FLVSSDPAKVKAA-------MGTMDYIID 253 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~~~d~vid 253 (359)
.+++++|.|+ |++|...++.+...|++|+++++++++++.+ ...+... ..|..+.+.+..+ .+++|++++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL-ASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3578999986 9999999999989999999999998887666 3444432 3455555444332 247999999
Q ss_pred CCCC
Q 018246 254 TVSA 257 (359)
Q Consensus 254 ~~g~ 257 (359)
+.|.
T Consensus 81 ~ag~ 84 (273)
T PRK06182 81 NAGY 84 (273)
T ss_pred CCCc
Confidence 9874
No 171
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.37 E-value=0.0017 Score=60.96 Aligned_cols=112 Identities=18% Similarity=0.175 Sum_probs=74.9
Q ss_pred cccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHH
Q 018246 163 PLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAF-LVSSDPAKV 241 (359)
Q Consensus 163 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v-~~~~~~~~~ 241 (359)
.+..+..+.+..+.....+++|++||.+|+| .|.++..+++..|++|++++.+++..+.+.+......+ +...+ .
T Consensus 147 ~L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D---~ 222 (383)
T PRK11705 147 TLEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQD---Y 222 (383)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECc---h
Confidence 4444455555555555556899999999985 56677888888899999999999998888443321111 11111 1
Q ss_pred HHhcCCccEEEEC-----CCC---hhhHHHHHhccccCCEEEEec
Q 018246 242 KAAMGTMDYIIDT-----VSA---VHSLAPLLGLLKVNGKLVTVG 278 (359)
Q Consensus 242 ~~~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g 278 (359)
..+.+.+|.|+.. ++. ...+..+.+.|+|+|.++...
T Consensus 223 ~~l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 223 RDLNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred hhcCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 2223579988743 333 234788889999999998753
No 172
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.004 Score=55.32 Aligned_cols=75 Identities=20% Similarity=0.290 Sum_probs=55.6
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc---EEecCCCHHHHHHh-------cCCccEE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD---AFLVSSDPAKVKAA-------MGTMDYI 251 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~-------~~~~d~v 251 (359)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.++++.. ...|..+.+.+.++ .+.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999986 99999999999999999999999988777775666532 12355554433332 2478999
Q ss_pred EECCCC
Q 018246 252 IDTVSA 257 (359)
Q Consensus 252 id~~g~ 257 (359)
+.+.|.
T Consensus 85 v~~ag~ 90 (261)
T PRK08265 85 VNLACT 90 (261)
T ss_pred EECCCC
Confidence 998874
No 173
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.28 E-value=0.00058 Score=56.41 Aligned_cols=98 Identities=21% Similarity=0.318 Sum_probs=67.2
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecC------------------CC--HHHHH
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVS------------------SD--PAKVK 242 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~------------------~~--~~~~~ 242 (359)
+..+|+|+|+|.+|+.|+++++.+|++|++.+..+++.+.. +..+...+... .. ...+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQL-ESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHH-HHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhh-hcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 33689999999999999999999999999999999988877 66665443321 01 12233
Q ss_pred HhcCCccEEEECCC-----Chh-hHHHHHhccccCCEEEEecCCC
Q 018246 243 AAMGTMDYIIDTVS-----AVH-SLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 243 ~~~~~~d~vid~~g-----~~~-~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+....+|+++.+.- .+. ..+..++.|+++..++++....
T Consensus 98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~ 142 (168)
T PF01262_consen 98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ 142 (168)
T ss_dssp HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence 34457899986331 112 2367889999999999996543
No 174
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.28 E-value=0.0022 Score=56.93 Aligned_cols=106 Identities=21% Similarity=0.318 Sum_probs=72.2
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHH---HHcCCcE-E----ecCCCHHHHHH-------hcC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAI---SKLGADA-F----LVSSDPAKVKA-------AMG 246 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~---~~~g~~~-v----~~~~~~~~~~~-------~~~ 246 (359)
.|++|+|.|+ +++|.+.+.-....|++++.+++..+|++... ++.+... + .|-.+.+.+.+ ..+
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 5789999997 89999988888889999888888887765552 3444322 2 23444443332 235
Q ss_pred CccEEEECCCCh-------------------------hhHHHHHhccccC--CEEEEecCCCCCeeeCH
Q 018246 247 TMDYIIDTVSAV-------------------------HSLAPLLGLLKVN--GKLVTVGLPEKPLEVPI 288 (359)
Q Consensus 247 ~~d~vid~~g~~-------------------------~~~~~~~~~l~~~--G~~v~~g~~~~~~~~~~ 288 (359)
++|+.++++|-. .....++..|++. |+||.+++..+...++.
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~ 159 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF 159 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc
Confidence 899999988843 1234456666554 99999988776555544
No 175
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0044 Score=55.55 Aligned_cols=74 Identities=18% Similarity=0.303 Sum_probs=54.8
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHh-------c-CCccEEE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAF-LVSSDPAKVKAA-------M-GTMDYII 252 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~-------~-~~~d~vi 252 (359)
.+++|||.|+ |++|...++.+...|++|+++++++++.+.+ ...+...+ .|..+.+.+..+ . +.+|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL-EAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 4578999987 9999999999988999999999999888776 44554433 455555433222 1 3689999
Q ss_pred ECCCC
Q 018246 253 DTVSA 257 (359)
Q Consensus 253 d~~g~ 257 (359)
++.|.
T Consensus 82 ~~Ag~ 86 (277)
T PRK05993 82 NNGAY 86 (277)
T ss_pred ECCCc
Confidence 98863
No 176
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.25 E-value=0.0066 Score=56.81 Aligned_cols=95 Identities=26% Similarity=0.388 Sum_probs=71.5
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChh--
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVH-- 259 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 259 (359)
.+.+|||+|+|-+|..++..+...|. +|++..|+.+|...+.+++|+..+- .+.+......+|+||.+++.+.
T Consensus 177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~----l~el~~~l~~~DvVissTsa~~~i 252 (414)
T COG0373 177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVA----LEELLEALAEADVVISSTSAPHPI 252 (414)
T ss_pred ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeec----HHHHHHhhhhCCEEEEecCCCccc
Confidence 67899999999999999999999997 9999999999999998999954432 2334445568999999998765
Q ss_pred -hHHHHHhccccCC--EEEEecCCC
Q 018246 260 -SLAPLLGLLKVNG--KLVTVGLPE 281 (359)
Q Consensus 260 -~~~~~~~~l~~~G--~~v~~g~~~ 281 (359)
.-....+.+++.- -+++++.+.
T Consensus 253 i~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 253 ITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred cCHHHHHHHHhcccCeEEEEecCCC
Confidence 1234445554443 356666654
No 177
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.25 E-value=0.0034 Score=55.95 Aligned_cols=97 Identities=18% Similarity=0.246 Sum_probs=74.9
Q ss_pred ccccchhhhhhhHhHhcCCCCCCCEEEEECCch-HHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 018246 162 APLLCAGITVYSPMKYYGMTEPGKHLGVAGLGG-LGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK 240 (359)
Q Consensus 162 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~-vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (359)
..+||+..+.+..++...---.|++|+|+|.|. +|.-++.++...|++|++..+... .
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~ 194 (286)
T PRK14175 136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------D 194 (286)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------h
Confidence 356777777777777765435899999999865 999999999999999999876432 1
Q ss_pred HHHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCC
Q 018246 241 VKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 241 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+.+.....|+||.++|.+..+.. ..++++..++++|...
T Consensus 195 l~~~~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 195 MASYLKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred HHHHHhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 33445578999999999875554 4589999999998764
No 178
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.24 E-value=0.0014 Score=58.87 Aligned_cols=106 Identities=15% Similarity=0.173 Sum_probs=67.1
Q ss_pred hhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCC----cEEecCCCHHHHHHhc
Q 018246 171 VYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGA----DAFLVSSDPAKVKAAM 245 (359)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~~~ 245 (359)
...+++....-..+++|+|+|+|++|.+++..+...|+ +|++++|+.++.+.+.++++. ..+.... .+.+..
T Consensus 114 ~~~~l~~~~~~~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~ 190 (284)
T PRK12549 114 FAESFRRGLPDASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAAL 190 (284)
T ss_pred HHHHHHhhccCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhh
Confidence 34445432211356889999999999999999999998 899999999998877666531 2222222 122233
Q ss_pred CCccEEEECCCChh----hHHHHHhccccCCEEEEecC
Q 018246 246 GTMDYIIDTVSAVH----SLAPLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 246 ~~~d~vid~~g~~~----~~~~~~~~l~~~G~~v~~g~ 279 (359)
..+|+|++|+.... ...-....+++...++++-.
T Consensus 191 ~~aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY 228 (284)
T PRK12549 191 AAADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVY 228 (284)
T ss_pred CCCCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeee
Confidence 57999999964321 00011234666666666544
No 179
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.23 E-value=0.003 Score=57.08 Aligned_cols=99 Identities=15% Similarity=0.191 Sum_probs=62.9
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCCh---hhHHHHHHHcCC---c---EEecCCCHHHHHHhcCCccEE
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSP---KKESEAISKLGA---D---AFLVSSDPAKVKAAMGTMDYI 251 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~---~~~~~~~~~~g~---~---~v~~~~~~~~~~~~~~~~d~v 251 (359)
-.+++++|+|+|++|++++..+...|+ +|+++.|++ ++.+.+.+++.. . ...+..+.+.+......+|++
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil 203 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL 203 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence 357889999999999999998889999 599999986 565555444421 1 123333333444444578999
Q ss_pred EECCCChhh-----HHH-HHhccccCCEEEEecCC
Q 018246 252 IDTVSAVHS-----LAP-LLGLLKVNGKLVTVGLP 280 (359)
Q Consensus 252 id~~g~~~~-----~~~-~~~~l~~~G~~v~~g~~ 280 (359)
++|+.-... ... ....+.+...++++-..
T Consensus 204 INaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~ 238 (289)
T PRK12548 204 VNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYN 238 (289)
T ss_pred EEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCC
Confidence 998863220 000 12445666666666443
No 180
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.21 E-value=0.0018 Score=57.78 Aligned_cols=108 Identities=17% Similarity=0.219 Sum_probs=69.4
Q ss_pred hhhHhHhcC--CCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHhcC
Q 018246 171 VYSPMKYYG--MTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAF-LVSSDPAKVKAAMG 246 (359)
Q Consensus 171 a~~~l~~~~--~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~ 246 (359)
-+.+|.... ...+|++++|+|+|+.+.+++.-++..|+ +++++.|+.+|.+++.+.++.... +.......+....
T Consensus 111 ~~~~L~~~~~~~~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~- 189 (283)
T COG0169 111 FLRALKEFGLPVDVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE- 189 (283)
T ss_pred HHHHHHhcCCCcccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc-
Confidence 344555533 33468999999999999999999999997 899999999999888777763221 1111000011111
Q ss_pred CccEEEECCCChhhHHH-----HHhccccCCEEEEecC
Q 018246 247 TMDYIIDTVSAVHSLAP-----LLGLLKVNGKLVTVGL 279 (359)
Q Consensus 247 ~~d~vid~~g~~~~~~~-----~~~~l~~~G~~v~~g~ 279 (359)
.+|+++++++....-.. ...++++.-.+.++-.
T Consensus 190 ~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY 227 (283)
T COG0169 190 EADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVY 227 (283)
T ss_pred ccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEecc
Confidence 58999999875431110 0355666666666644
No 181
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.20 E-value=0.008 Score=46.44 Aligned_cols=97 Identities=18% Similarity=0.274 Sum_probs=65.6
Q ss_pred CCCCCEEEEECCchHHHHHHHHHHHCC-CeEEEEeCChhhHHHHH---HHcCCc--EEecCCCHHHHHHhcCCccEEEEC
Q 018246 181 TEPGKHLGVAGLGGLGHVAVKIGKAFG-LKVTVISTSPKKESEAI---SKLGAD--AFLVSSDPAKVKAAMGTMDYIIDT 254 (359)
Q Consensus 181 ~~~g~~VlI~G~g~vG~~a~~la~~~g-~~V~~v~~~~~~~~~~~---~~~g~~--~v~~~~~~~~~~~~~~~~d~vid~ 254 (359)
+.++++|+-+|+|. |..+..+++..+ .+|+.++.++...+.+. +.++.. .++..+...........+|+|+..
T Consensus 17 ~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~ 95 (124)
T TIGR02469 17 LRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPDRVFIG 95 (124)
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCCEEEEC
Confidence 36778899999977 888899998875 59999999988776653 234432 222221111111223479999975
Q ss_pred CCCh---hhHHHHHhccccCCEEEEec
Q 018246 255 VSAV---HSLAPLLGLLKVNGKLVTVG 278 (359)
Q Consensus 255 ~g~~---~~~~~~~~~l~~~G~~v~~g 278 (359)
.... ..++.+.+.|+++|+++...
T Consensus 96 ~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 96 GSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred CcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 5332 25788999999999998753
No 182
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.20 E-value=0.0023 Score=60.38 Aligned_cols=92 Identities=20% Similarity=0.289 Sum_probs=67.4
Q ss_pred EEEECCchHHHHHHHHHHHCC-C-eEEEEeCChhhHHHHHHHc-C--C-cEEecCCCHHHHHHhcCCccEEEECCCChhh
Q 018246 187 LGVAGLGGLGHVAVKIGKAFG-L-KVTVISTSPKKESEAISKL-G--A-DAFLVSSDPAKVKAAMGTMDYIIDTVSAVHS 260 (359)
Q Consensus 187 VlI~G~g~vG~~a~~la~~~g-~-~V~~v~~~~~~~~~~~~~~-g--~-~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 260 (359)
|+|+|+|.+|..+++.+...+ . +|++.+++.++.+.+.+++ + . ...+|..+.+.+.++..+.|+|++|+|....
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~~ 80 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFFG 80 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGGH
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccchh
Confidence 688888999999999988776 4 8999999999988875542 2 2 3456667777788888899999999997654
Q ss_pred HHHHHhccccCCEEEEec
Q 018246 261 LAPLLGLLKVNGKLVTVG 278 (359)
Q Consensus 261 ~~~~~~~l~~~G~~v~~g 278 (359)
...+-.|++.+-.+++.+
T Consensus 81 ~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 81 EPVARACIEAGVHYVDTS 98 (386)
T ss_dssp HHHHHHHHHHT-EEEESS
T ss_pred HHHHHHHHHhCCCeeccc
Confidence 566777888888999843
No 183
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0035 Score=56.89 Aligned_cols=75 Identities=23% Similarity=0.329 Sum_probs=57.3
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cE-E--ecCCCHHHHHHh-------cCCcc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGA--DA-F--LVSSDPAKVKAA-------MGTMD 249 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~--~~-v--~~~~~~~~~~~~-------~~~~d 249 (359)
.|+++||.|+ |++|+.+++.+...|++|+++++++++.+.+.++++. +. . .|..+.+.+.++ .+.+|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999986 9999999999999999999999999888777666652 21 1 455555433332 24799
Q ss_pred EEEECCCC
Q 018246 250 YIIDTVSA 257 (359)
Q Consensus 250 ~vid~~g~ 257 (359)
++++++|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999985
No 184
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0074 Score=55.78 Aligned_cols=75 Identities=19% Similarity=0.297 Sum_probs=54.8
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCcE---EecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS---KLGADA---FLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~-------~~~~ 248 (359)
.+++++|.|+ |++|+.+++.+...|++|+++++++++.+.+.+ ..|.+. ..|..+.+.+.++ .+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 4678999986 999999999999999999999999887665533 334332 2355555444333 2479
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|++++++|.
T Consensus 87 D~lInnAg~ 95 (334)
T PRK07109 87 DTWVNNAMV 95 (334)
T ss_pred CEEEECCCc
Confidence 999999884
No 185
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.18 E-value=0.0038 Score=59.13 Aligned_cols=75 Identities=15% Similarity=0.207 Sum_probs=59.7
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChh
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVH 259 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 259 (359)
-.+.+|||+|+|.+|.+++..+...|+ +++++.|+.++.+.+.++++...++.. +.+......+|+||.|++.+.
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~---~~l~~~l~~aDiVI~aT~a~~ 254 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL---SELPQLIKKADIIIAAVNVLE 254 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH---HHHHHHhccCCEEEECcCCCC
Confidence 367899999999999999999999997 899999999998888777763223322 333455568999999999876
No 186
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.18 E-value=0.0024 Score=57.38 Aligned_cols=111 Identities=20% Similarity=0.256 Sum_probs=71.4
Q ss_pred hhhhhhHhHh-cCCCCCCCEEEEECCchHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhc
Q 018246 168 GITVYSPMKY-YGMTEPGKHLGVAGLGGLGHVAVKIGKAFG-LKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAM 245 (359)
Q Consensus 168 ~~ta~~~l~~-~~~~~~g~~VlI~G~g~vG~~a~~la~~~g-~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 245 (359)
+.....++.. .+.-..+.+++|+|+|++|.+++..+...| .+|+++.|+.++.+.+.++++....+... . ......
T Consensus 106 ~~G~~~~l~~~~~~~~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~-~-~~~~~~ 183 (278)
T PRK00258 106 GIGFVRALEERLGVDLKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELD-L-ELQEEL 183 (278)
T ss_pred HHHHHHHHHhccCCCCCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeec-c-cchhcc
Confidence 3334445543 232246788999999999999999999999 49999999999888776666532101110 0 112233
Q ss_pred CCccEEEECCCChhh-----HHHHHhccccCCEEEEecCC
Q 018246 246 GTMDYIIDTVSAVHS-----LAPLLGLLKVNGKLVTVGLP 280 (359)
Q Consensus 246 ~~~d~vid~~g~~~~-----~~~~~~~l~~~G~~v~~g~~ 280 (359)
..+|+|++|++.... .......+.+...++++-..
T Consensus 184 ~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~ 223 (278)
T PRK00258 184 ADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYG 223 (278)
T ss_pred ccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecC
Confidence 579999999875431 01123566777777777543
No 187
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=97.14 E-value=0.00073 Score=65.38 Aligned_cols=77 Identities=19% Similarity=0.296 Sum_probs=56.3
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCCh---------------------hhHHHHHHHcCCcEEecCCCH-H
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSP---------------------KKESEAISKLGADAFLVSSDP-A 239 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~---------------------~~~~~~~~~~g~~~v~~~~~~-~ 239 (359)
..+++|+|+|+|+.|+.++..++..|.+|+++++.+ .+.+.+ +++|++..++..-. +
T Consensus 139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~-~~~Gv~~~~~~~v~~~ 217 (467)
T TIGR01318 139 PTGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIF-TAMGIEFHLNCEVGRD 217 (467)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHH-HHCCCEEECCCEeCCc
Confidence 367899999999999999999999999999998664 133444 78887765554211 1
Q ss_pred -HHHHhcCCccEEEECCCChh
Q 018246 240 -KVKAAMGTMDYIIDTVSAVH 259 (359)
Q Consensus 240 -~~~~~~~~~d~vid~~g~~~ 259 (359)
.+..+..++|.||.++|...
T Consensus 218 ~~~~~~~~~~D~vilAtGa~~ 238 (467)
T TIGR01318 218 ISLDDLLEDYDAVFLGVGTYR 238 (467)
T ss_pred cCHHHHHhcCCEEEEEeCCCC
Confidence 22233347999999999754
No 188
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.12 E-value=0.0058 Score=55.82 Aligned_cols=96 Identities=20% Similarity=0.192 Sum_probs=67.8
Q ss_pred CCCCCCEEEEECCchHHHHHHHHHHHCCC--eEEEEeCChhhHHHHH---HHcCCcEEecCCCHHHHHHh--cCCccEEE
Q 018246 180 MTEPGKHLGVAGLGGLGHVAVKIGKAFGL--KVTVISTSPKKESEAI---SKLGADAFLVSSDPAKVKAA--MGTMDYII 252 (359)
Q Consensus 180 ~~~~g~~VlI~G~g~vG~~a~~la~~~g~--~V~~v~~~~~~~~~~~---~~~g~~~v~~~~~~~~~~~~--~~~~d~vi 252 (359)
.++++++||.+|+| .|..++.+++..+. +|++++.+++..+.+. ++.|.+.+..... +..... ...+|+|+
T Consensus 77 ~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g-D~~~~~~~~~~fD~Ii 154 (322)
T PRK13943 77 GLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG-DGYYGVPEFAPYDVIF 154 (322)
T ss_pred CCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-ChhhcccccCCccEEE
Confidence 34789999999997 59999999998864 7999999998765553 3456543322211 111111 13699999
Q ss_pred ECCCChhhHHHHHhccccCCEEEEe
Q 018246 253 DTVSAVHSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 253 d~~g~~~~~~~~~~~l~~~G~~v~~ 277 (359)
.+.+........++.|+++|+++..
T Consensus 155 ~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 155 VTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred ECCchHHhHHHHHHhcCCCCEEEEE
Confidence 9888766456788999999998763
No 189
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0042 Score=54.35 Aligned_cols=75 Identities=21% Similarity=0.339 Sum_probs=57.5
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHhc---CCccEEEECCCC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADA-FLVSSDPAKVKAAM---GTMDYIIDTVSA 257 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~---~~~d~vid~~g~ 257 (359)
.+.+++|.|+ |.+|...++.+...|++|+++++++++.+.+.+..+... ..|..+.+.+.++. +++|++|++.|.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~ 87 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGI 87 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 5678999987 999999999999999999999999888777655556543 34555555444433 368999999874
No 190
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.10 E-value=0.0025 Score=62.08 Aligned_cols=72 Identities=19% Similarity=0.268 Sum_probs=55.3
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCCh
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAV 258 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 258 (359)
.+|++|+|+|.|..|++++++++..|++|++.+..+++.+.+ +++|+..+...+..+. ...+|+|+.+.|-+
T Consensus 10 ~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l-~~~g~~~~~~~~~~~~----l~~~D~VV~SpGi~ 81 (488)
T PRK03369 10 LPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPH-AERGVATVSTSDAVQQ----IADYALVVTSPGFR 81 (488)
T ss_pred cCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HhCCCEEEcCcchHhH----hhcCCEEEECCCCC
Confidence 578899999999999999999999999999999887776665 6778754322222222 23679999998865
No 191
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0043 Score=57.23 Aligned_cols=75 Identities=20% Similarity=0.318 Sum_probs=56.2
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCcE---EecCCCHHHHHHhc-------CCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS---KLGADA---FLVSSDPAKVKAAM-------GTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~-------~~~ 248 (359)
.++++||.|+ |++|.++++.+...|++|+++++++++++.+.+ +.|.+. ..|..+.+.+.++. +++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 5689999987 999999999999999999999999988765533 345432 23555554444332 579
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|++|+++|.
T Consensus 86 D~lVnnAG~ 94 (330)
T PRK06139 86 DVWVNNVGV 94 (330)
T ss_pred CEEEECCCc
Confidence 999999984
No 192
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=97.09 E-value=0.0086 Score=53.56 Aligned_cols=129 Identities=19% Similarity=0.269 Sum_probs=76.2
Q ss_pred CCceEECCCCCCccccccccchhhhhh--hHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHH
Q 018246 146 QHYVLRFPDNMPLDAGAPLLCAGITVY--SPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESE 222 (359)
Q Consensus 146 ~~~~~~lp~~l~~~~aa~l~~~~~ta~--~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~ 222 (359)
...+++|.+++.+-. .....|++ .++... +++|.+||-+|+|. |.+++..+ .+|+ +|++++-.+...+.
T Consensus 129 ~~~~i~lDPGlAFGT----G~HpTT~lcL~~Le~~--~~~g~~vlDvGcGS-GILaIAa~-kLGA~~v~g~DiDp~AV~a 200 (300)
T COG2264 129 DELNIELDPGLAFGT----GTHPTTSLCLEALEKL--LKKGKTVLDVGCGS-GILAIAAA-KLGAKKVVGVDIDPQAVEA 200 (300)
T ss_pred CceEEEEccccccCC----CCChhHHHHHHHHHHh--hcCCCEEEEecCCh-hHHHHHHH-HcCCceEEEecCCHHHHHH
Confidence 355777777775543 22333322 223333 35999999998753 55555544 4687 89999988876655
Q ss_pred HHH---HcCCcEEecCCCHHHHHHhc-CCccEEEECCCChh---hHHHHHhccccCCEEEEecCCCC
Q 018246 223 AIS---KLGADAFLVSSDPAKVKAAM-GTMDYIIDTVSAVH---SLAPLLGLLKVNGKLVTVGLPEK 282 (359)
Q Consensus 223 ~~~---~~g~~~v~~~~~~~~~~~~~-~~~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~~~~ 282 (359)
+.+ .-+................. +.+|+|+.+.=... ......+.++|+|++++.|....
T Consensus 201 a~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~~ 267 (300)
T COG2264 201 ARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILED 267 (300)
T ss_pred HHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehHh
Confidence 522 22222211111111122222 48999998764332 34678889999999999997654
No 193
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0073 Score=52.95 Aligned_cols=75 Identities=23% Similarity=0.275 Sum_probs=53.7
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc---EEecCCCHHHHHHhc-------CCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK---LGAD---AFLVSSDPAKVKAAM-------GTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~~-------~~~ 248 (359)
++.+++|.|+ |++|...+..+...|++|+++++++++.+...++ .+.. ...|..+.+.+..+. +++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999986 9999999999999999999999988766554333 2322 223555554433322 479
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++.++|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999885
No 194
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.07 E-value=0.0088 Score=57.69 Aligned_cols=75 Identities=17% Similarity=0.278 Sum_probs=53.4
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCCh--hhHHHHHHHcCCc-EEecCCCHHHHHHh-------cCCccEE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSP--KKESEAISKLGAD-AFLVSSDPAKVKAA-------MGTMDYI 251 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~--~~~~~~~~~~g~~-~v~~~~~~~~~~~~-------~~~~d~v 251 (359)
+++++||.|+ |++|...++.+...|++|+++++.. ++.+.+.++++.. ..+|..+.+.+..+ .+++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 5789999986 9999999999999999999998743 3444444556643 23465555443332 2368999
Q ss_pred EECCCC
Q 018246 252 IDTVSA 257 (359)
Q Consensus 252 id~~g~ 257 (359)
|++.|.
T Consensus 289 i~~AG~ 294 (450)
T PRK08261 289 VHNAGI 294 (450)
T ss_pred EECCCc
Confidence 999883
No 195
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.07 E-value=0.0095 Score=50.65 Aligned_cols=89 Identities=19% Similarity=0.143 Sum_probs=62.2
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhhH
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSL 261 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 261 (359)
-.|.+|+|.|.|.+|..+++.+...|++|+++++++++.+.+.+.+|+..+ +..+ -.....|+++-|......-
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v-~~~~-----l~~~~~Dv~vp~A~~~~I~ 99 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVV-APEE-----IYSVDADVFAPCALGGVIN 99 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE-cchh-----hccccCCEEEecccccccC
Confidence 367899999999999999999999999999999999888877566675433 2211 1112688998666544423
Q ss_pred HHHHhccccCCEEEEec
Q 018246 262 APLLGLLKVNGKLVTVG 278 (359)
Q Consensus 262 ~~~~~~l~~~G~~v~~g 278 (359)
...++.|+ .++|.-+
T Consensus 100 ~~~~~~l~--~~~v~~~ 114 (200)
T cd01075 100 DDTIPQLK--AKAIAGA 114 (200)
T ss_pred HHHHHHcC--CCEEEEC
Confidence 45555664 3444433
No 196
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.05 E-value=0.0054 Score=55.07 Aligned_cols=75 Identities=13% Similarity=0.254 Sum_probs=53.3
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcC----CcEEecCCCHHHHHHhcCCccEEEECCC
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLG----ADAFLVSSDPAKVKAAMGTMDYIIDTVS 256 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~~~~~d~vid~~g 256 (359)
..+++++|+|+|+.+++++..+...|+ +++++.|+.+|.+.+.+++. ...+. ..+..........+|+|++++.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~-~~~~~~~~~~~~~~divINaTp 203 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV-GVDARGIEDVIAAADGVVNATP 203 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE-ecCHhHHHHHHhhcCEEEEcCC
Confidence 357899999999999999998888998 89999999999888766553 11121 1111111222346899999886
Q ss_pred C
Q 018246 257 A 257 (359)
Q Consensus 257 ~ 257 (359)
-
T Consensus 204 ~ 204 (283)
T PRK14027 204 M 204 (283)
T ss_pred C
Confidence 3
No 197
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.008 Score=52.31 Aligned_cols=75 Identities=27% Similarity=0.307 Sum_probs=53.0
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC----cE-EecCCCHHHHHHh-------cCCcc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGA----DA-FLVSSDPAKVKAA-------MGTMD 249 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~----~~-v~~~~~~~~~~~~-------~~~~d 249 (359)
.+.+++|+|+ |.+|..+++.+...|++|+++++++++.+.+.+++.. .. ..|..+.+.+... .+++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678999986 9999999998888899999999998877666555431 11 1244444332222 24799
Q ss_pred EEEECCCC
Q 018246 250 YIIDTVSA 257 (359)
Q Consensus 250 ~vid~~g~ 257 (359)
++|++.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99998764
No 198
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.04 E-value=0.0049 Score=55.11 Aligned_cols=108 Identities=15% Similarity=0.106 Sum_probs=70.0
Q ss_pred hhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC---cEEecCCCHHHHHHhc
Q 018246 169 ITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGA---DAFLVSSDPAKVKAAM 245 (359)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~ 245 (359)
.....++........+++++|+|+|++|.+++..+...|++|++++|++++.+.+.+++.. ....... . ...
T Consensus 102 ~G~~~~l~~~~~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~---~--~~~ 176 (270)
T TIGR00507 102 IGLVSDLERLIPLRPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMD---E--LPL 176 (270)
T ss_pred HHHHHHHHhcCCCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechh---h--hcc
Confidence 3334445443333557899999999999999988888899999999998887776555532 1222111 1 112
Q ss_pred CCccEEEECCCChh--hH---HHHHhccccCCEEEEecCCC
Q 018246 246 GTMDYIIDTVSAVH--SL---APLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 246 ~~~d~vid~~g~~~--~~---~~~~~~l~~~G~~v~~g~~~ 281 (359)
..+|++++|++... .. ......++++..++++...+
T Consensus 177 ~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p 217 (270)
T TIGR00507 177 HRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNP 217 (270)
T ss_pred cCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCC
Confidence 46899999998642 01 01134567777888875543
No 199
>PRK08618 ornithine cyclodeaminase; Validated
Probab=97.03 E-value=0.0058 Score=56.17 Aligned_cols=106 Identities=22% Similarity=0.232 Sum_probs=73.2
Q ss_pred HhcCCCCCCCEEEEECCchHHHHHHHHH-HHCCC-eEEEEeCChhhHHHHHHHc----CCcEEecCCCHHHHHHhcCCcc
Q 018246 176 KYYGMTEPGKHLGVAGLGGLGHVAVKIG-KAFGL-KVTVISTSPKKESEAISKL----GADAFLVSSDPAKVKAAMGTMD 249 (359)
Q Consensus 176 ~~~~~~~~g~~VlI~G~g~vG~~a~~la-~~~g~-~V~~v~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~d 249 (359)
+...+ ...++++|+|+|..|.+.+..+ ...+. +|.+.++++++.+.+.+++ +... ....+ ..+.....|
T Consensus 120 ~~la~-~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~-~~~~~---~~~~~~~aD 194 (325)
T PRK08618 120 KYLAR-EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEI-YVVNS---ADEAIEEAD 194 (325)
T ss_pred HHhcC-CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcE-EEeCC---HHHHHhcCC
Confidence 44444 4567899999999998877554 45677 8999999999887775544 4332 22222 233446799
Q ss_pred EEEECCCChhhHHHHHhccccCCEEEEecCCCC-CeeeCH
Q 018246 250 YIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEK-PLEVPI 288 (359)
Q Consensus 250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~ 288 (359)
+|+.|+++.+.+ -. ..+++|-.+..+|.... ...++.
T Consensus 195 iVi~aT~s~~p~-i~-~~l~~G~hV~~iGs~~p~~~E~~~ 232 (325)
T PRK08618 195 IIVTVTNAKTPV-FS-EKLKKGVHINAVGSFMPDMQELPS 232 (325)
T ss_pred EEEEccCCCCcc-hH-HhcCCCcEEEecCCCCcccccCCH
Confidence 999999876622 23 88899999999987653 334454
No 200
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.03 E-value=0.016 Score=49.39 Aligned_cols=114 Identities=14% Similarity=0.075 Sum_probs=71.2
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcC-CcEEecCCCHHHHHHhcCCccEEEECCCChhh
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPK-KESEAISKLG-ADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHS 260 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~-~~~~~~~~~g-~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 260 (359)
.|.+|||+|+|.+|..-++.+...|++|++++.... ....+ .+.| ...+-..-.. ....++++||-+++....
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l-~~~~~i~~~~~~~~~----~dl~~~~lVi~at~d~~l 82 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLL-AEQGGITWLARCFDA----DILEGAFLVIAATDDEEL 82 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHH-HHcCCEEEEeCCCCH----HHhCCcEEEEECCCCHHH
Confidence 467999999999999999999999999999987654 33344 2333 2222111111 123589999999999863
Q ss_pred HHHHHhccccCCEEEEecCCCCCeeeCHHHHHh-cCcEEEEe
Q 018246 261 LAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVG-ARRLVGGS 301 (359)
Q Consensus 261 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-k~~~i~g~ 301 (359)
-.......+..|.++.+........|.+...+. ..+++.-+
T Consensus 83 n~~i~~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g~l~iais 124 (205)
T TIGR01470 83 NRRVAHAARARGVPVNVVDDPELCSFIFPSIVDRSPVVVAIS 124 (205)
T ss_pred HHHHHHHHHHcCCEEEECCCcccCeEEEeeEEEcCCEEEEEE
Confidence 345555566778888765544333332222232 33555433
No 201
>PRK06484 short chain dehydrogenase; Validated
Probab=97.03 E-value=0.0097 Score=58.51 Aligned_cols=100 Identities=19% Similarity=0.299 Sum_probs=71.2
Q ss_pred CCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc---EEecCCCHHHHHHh-------cCCccE
Q 018246 182 EPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD---AFLVSSDPAKVKAA-------MGTMDY 250 (359)
Q Consensus 182 ~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~-------~~~~d~ 250 (359)
..|+++||.|+ +++|+..++.+...|++|+++++++++.+.+.++++.. ...|..+.+.+.++ .+.+|+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46788999986 99999999999999999999999998888776666643 22355554433332 247999
Q ss_pred EEECCCCh--------------------------hhHHHHHhccccCCEEEEecCCC
Q 018246 251 IIDTVSAV--------------------------HSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 251 vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
++.++|.. ...+.++..|+.+|+++.++...
T Consensus 347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~ 403 (520)
T PRK06484 347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIA 403 (520)
T ss_pred EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchh
Confidence 99988742 01233445566679999987644
No 202
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.03 E-value=0.0026 Score=54.12 Aligned_cols=95 Identities=11% Similarity=0.024 Sum_probs=61.8
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhhH
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPK-KESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSL 261 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 261 (359)
.|.+|||+|+|.+|...+..+...|++|+++++... ++..+........ .... .......++|+||-+++.+. +
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~--~~~~--~~~~~l~~adlViaaT~d~e-l 83 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRW--KQKE--FEPSDIVDAFLVIAATNDPR-V 83 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEE--EecC--CChhhcCCceEEEEcCCCHH-H
Confidence 578999999999999999988889999999976532 2233312211111 1111 11112347999999999988 7
Q ss_pred HHHHhccccCCEEEEecCCCC
Q 018246 262 APLLGLLKVNGKLVTVGLPEK 282 (359)
Q Consensus 262 ~~~~~~l~~~G~~v~~g~~~~ 282 (359)
+..+...+..+.++.+.....
T Consensus 84 N~~i~~~a~~~~lvn~~d~~~ 104 (202)
T PRK06718 84 NEQVKEDLPENALFNVITDAE 104 (202)
T ss_pred HHHHHHHHHhCCcEEECCCCc
Confidence 666665555567777755443
No 203
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.02 E-value=0.0081 Score=54.12 Aligned_cols=86 Identities=16% Similarity=0.251 Sum_probs=55.0
Q ss_pred hhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCCh---hhHHHHHHHcCCc-----EEecCCCHHHHH
Q 018246 172 YSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSP---KKESEAISKLGAD-----AFLVSSDPAKVK 242 (359)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~---~~~~~~~~~~g~~-----~v~~~~~~~~~~ 242 (359)
..+++..+.--.++++||+|+|+.+++++..+...|+ +|+++.|++ ++.+.+.++++.. .+....+.+.+.
T Consensus 112 ~~~l~~~~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~ 191 (288)
T PRK12749 112 IRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFA 191 (288)
T ss_pred HHHHHhcCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhh
Confidence 3445443322367799999999999988887778898 999999985 4666665666421 122211111122
Q ss_pred HhcCCccEEEECCCC
Q 018246 243 AAMGTMDYIIDTVSA 257 (359)
Q Consensus 243 ~~~~~~d~vid~~g~ 257 (359)
.....+|+|++|+.-
T Consensus 192 ~~~~~aDivINaTp~ 206 (288)
T PRK12749 192 EALASADILTNGTKV 206 (288)
T ss_pred hhcccCCEEEECCCC
Confidence 333579999998864
No 204
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.00 E-value=0.0068 Score=55.32 Aligned_cols=91 Identities=21% Similarity=0.273 Sum_probs=64.4
Q ss_pred CEEEEECCchHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChh---
Q 018246 185 KHLGVAGLGGLGHVAVKIGKAFGL--KVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVH--- 259 (359)
Q Consensus 185 ~~VlI~G~g~vG~~a~~la~~~g~--~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 259 (359)
.+|.|+|.|.+|.+.+..++..|. +|+++++++++.+.+ ++.|.......+ ..+.....|+|+.|+....
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a-~~~g~~~~~~~~----~~~~~~~aDvViiavp~~~~~~ 81 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARA-RELGLGDRVTTS----AAEAVKGADLVILCVPVGASGA 81 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH-HhCCCCceecCC----HHHHhcCCCEEEECCCHHHHHH
Confidence 579999999999999999888885 899999999888777 667743211111 1223357899999998754
Q ss_pred hHHHHHhccccCCEEEEecCC
Q 018246 260 SLAPLLGLLKVNGKLVTVGLP 280 (359)
Q Consensus 260 ~~~~~~~~l~~~G~~v~~g~~ 280 (359)
.+......++++..++++|..
T Consensus 82 v~~~l~~~l~~~~iv~dvgs~ 102 (307)
T PRK07502 82 VAAEIAPHLKPGAIVTDVGSV 102 (307)
T ss_pred HHHHHHhhCCCCCEEEeCccc
Confidence 233344456777777777653
No 205
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=96.98 E-value=0.03 Score=50.48 Aligned_cols=157 Identities=17% Similarity=0.066 Sum_probs=90.3
Q ss_pred CCCEEEEECC-chHHHHHHHHHH-HCCC-eEEEEeCChhhHHHHHHHcCC-cEEecCCCHHHHHHhc-CCccEEEECCCC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGK-AFGL-KVTVISTSPKKESEAISKLGA-DAFLVSSDPAKVKAAM-GTMDYIIDTVSA 257 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~-~~g~-~V~~v~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~-~~~d~vid~~g~ 257 (359)
..+.|+|.++ +-.++..+.+++ ..+. +++.+.+...+. ..+.+|. +.++.|++ +.++. ...-+++|..|+
T Consensus 135 ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N~~--Fve~lg~Yd~V~~Yd~---i~~l~~~~~~v~VDfaG~ 209 (314)
T PF11017_consen 135 GAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARNVA--FVESLGCYDEVLTYDD---IDSLDAPQPVVIVDFAGN 209 (314)
T ss_pred CccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcchh--hhhccCCceEEeehhh---hhhccCCCCEEEEECCCC
Confidence 4456777765 888888888888 4444 888888765553 4488994 78887765 44443 356778899999
Q ss_pred hhhHHHHHhccccCC-EEEEecCCCCC-e------------eeCHHHHHhcCcEEEEeecCCHHHHHHHH-HHHHhCCCc
Q 018246 258 VHSLAPLLGLLKVNG-KLVTVGLPEKP-L------------EVPIFALVGARRLVGGSNVGGMKETQEML-DFCAKHNIA 322 (359)
Q Consensus 258 ~~~~~~~~~~l~~~G-~~v~~g~~~~~-~------------~~~~~~~~~k~~~i~g~~~~~~~~~~~~~-~~l~~g~i~ 322 (359)
..+...+-..++..= ..+.+|..+.. . .|.....+.|.+.-.|..... +.+.+.. ++++...=-
T Consensus 210 ~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~~l~g~~~~~FFAp~~~~kr~~~~G~~~~~-~r~~~aw~~f~~~~~~w 288 (314)
T PF11017_consen 210 GEVLAALHEHLGDNLVYSCLVGATHWDKVEAPADLPGPRPEFFFAPDQIDKRIKEWGAAEFF-QRMAAAWKRFAADAQPW 288 (314)
T ss_pred HHHHHHHHHHHhhhhhEEEEEEccCccccCccccCCCCCcEEEeChHHHHHHHHHhCHHHHH-HHHHHHHHHHHHhhcCc
Confidence 886777777776653 45666654421 1 111111122222212211111 1112222 222222111
Q ss_pred ccE-EEEccccHHHHHHHHHcCCc
Q 018246 323 ADI-ELVRMDQINTAMERLAKSDV 345 (359)
Q Consensus 323 ~~~-~~~~l~~~~~a~~~~~~~~~ 345 (359)
..+ +.-+.+.+.++++.+.+++.
T Consensus 289 l~~~~~~G~ea~~~~y~~l~~G~v 312 (314)
T PF11017_consen 289 LKVEEVAGPEAVEAAYQDLLAGKV 312 (314)
T ss_pred EEEEEecCHHHHHHHHHHHhcCCC
Confidence 222 56789999999999988763
No 206
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.96 E-value=0.0026 Score=54.38 Aligned_cols=100 Identities=26% Similarity=0.324 Sum_probs=62.5
Q ss_pred hcCCCCCCCEEEEECCchHHHHHHHHHHHCCC--eEEEEeCChhhHHHH---HHHcCCcEE-ecCCCHHHHHHhcCCccE
Q 018246 177 YYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL--KVTVISTSPKKESEA---ISKLGADAF-LVSSDPAKVKAAMGTMDY 250 (359)
Q Consensus 177 ~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~--~V~~v~~~~~~~~~~---~~~~g~~~v-~~~~~~~~~~~~~~~~d~ 250 (359)
....+++|++||-+|+|. |..++-+++..|. +|+.+++.++-.+.+ ++.++.+.+ +...+...-......||.
T Consensus 66 ~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~~apfD~ 144 (209)
T PF01135_consen 66 EALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPEEAPFDR 144 (209)
T ss_dssp HHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGGG-SEEE
T ss_pred HHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccccCCCcCE
Confidence 333369999999998753 6777777777665 799999888755444 234554322 111221110111237999
Q ss_pred EEECCCChhhHHHHHhccccCCEEEEe
Q 018246 251 IIDTVSAVHSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 251 vid~~g~~~~~~~~~~~l~~~G~~v~~ 277 (359)
++-+.+....-...+++|++||++|..
T Consensus 145 I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 145 IIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp EEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred EEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 999888777457899999999999974
No 207
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.95 E-value=0.017 Score=51.80 Aligned_cols=99 Identities=22% Similarity=0.289 Sum_probs=66.6
Q ss_pred CCCEEEEECC---chHHHHHHHHHHHCCCeEEEEeCCh---hhHHHHHHHcCCcE--EecCCCHHHHHHh-------cCC
Q 018246 183 PGKHLGVAGL---GGLGHVAVKIGKAFGLKVTVISTSP---KKESEAISKLGADA--FLVSSDPAKVKAA-------MGT 247 (359)
Q Consensus 183 ~g~~VlI~G~---g~vG~~a~~la~~~g~~V~~v~~~~---~~~~~~~~~~g~~~--v~~~~~~~~~~~~-------~~~ 247 (359)
.++++||.|+ +++|+++++.+...|++|+++++++ ++.+.+.++++... ..|-.+.+.+.++ .+.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4688999986 5899999999989999999999875 34444434555332 2455554433322 247
Q ss_pred ccEEEECCCCh-----------------------------hhHHHHHhccccCCEEEEecCCC
Q 018246 248 MDYIIDTVSAV-----------------------------HSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 248 ~d~vid~~g~~-----------------------------~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+|++++++|.. ...+.++..|..+|+++.++...
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~ 146 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG 146 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence 99999998831 01234555677789999886543
No 208
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.01 Score=52.05 Aligned_cols=97 Identities=25% Similarity=0.279 Sum_probs=63.1
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChh-hHHHHH---HHcCCc---EEecCCCHHHHHHhc-------CC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPK-KESEAI---SKLGAD---AFLVSSDPAKVKAAM-------GT 247 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~-~~~~~~---~~~g~~---~v~~~~~~~~~~~~~-------~~ 247 (359)
.++++||.|+ |.+|...+..+...|.+|++++++.+ +.+.+. +..+.. ...|..+.+.+..+. ++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4678999986 99999999999889999999888653 333332 222322 123555554433221 36
Q ss_pred ccEEEECCCCh-------------------hhHHHHHhccccCCEEEEecC
Q 018246 248 MDYIIDTVSAV-------------------HSLAPLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 248 ~d~vid~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~ 279 (359)
+|+++.+.+.. ..++.+...+..+|+++.++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 89999887642 123455556666789988865
No 209
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0067 Score=53.56 Aligned_cols=75 Identities=21% Similarity=0.276 Sum_probs=55.8
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHHhc-------CCccEEEE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD-AFLVSSDPAKVKAAM-------GTMDYIID 253 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~-------~~~d~vid 253 (359)
.|++|+|.|+ |++|..+++.+...|++|+++++++.+.+...++++.. ...|..+.+.+.++. +++|+++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4789999987 99999999999999999999999988776664555543 234555554433322 47899999
Q ss_pred CCCC
Q 018246 254 TVSA 257 (359)
Q Consensus 254 ~~g~ 257 (359)
+.|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 8874
No 210
>PRK06484 short chain dehydrogenase; Validated
Probab=96.95 E-value=0.015 Score=57.11 Aligned_cols=76 Identities=24% Similarity=0.400 Sum_probs=57.9
Q ss_pred CCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc---EEecCCCHHHHHHh-------cCCccE
Q 018246 182 EPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD---AFLVSSDPAKVKAA-------MGTMDY 250 (359)
Q Consensus 182 ~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~-------~~~~d~ 250 (359)
.+++++||.|+ +++|.+.++.+...|++|++++++.++.+.+.++++.. ...|..+.+.+.++ .+++|+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 36789999986 99999999999999999999999999888776777643 23455555433332 247999
Q ss_pred EEECCCC
Q 018246 251 IIDTVSA 257 (359)
Q Consensus 251 vid~~g~ 257 (359)
++++.|.
T Consensus 83 li~nag~ 89 (520)
T PRK06484 83 LVNNAGV 89 (520)
T ss_pred EEECCCc
Confidence 9999874
No 211
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.94 E-value=0.006 Score=54.06 Aligned_cols=109 Identities=17% Similarity=0.187 Sum_probs=75.2
Q ss_pred hhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCc---EEecCCCHHHH
Q 018246 168 GITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS---KLGAD---AFLVSSDPAKV 241 (359)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~---~~g~~---~v~~~~~~~~~ 241 (359)
-..++..+.....++||++||-+|+|- |.+++.+|+..|++|+.+.-+++..+.+.+ +.|.. .+. . ...
T Consensus 57 Q~~k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~-l---~d~ 131 (283)
T COG2230 57 QRAKLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVR-L---QDY 131 (283)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEE-e---ccc
Confidence 445566666666679999999999875 667888999999999999999998777633 34532 111 0 111
Q ss_pred HHhcCCccEEEE-----CCCCh---hhHHHHHhccccCCEEEEecCCC
Q 018246 242 KAAMGTMDYIID-----TVSAV---HSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 242 ~~~~~~~d~vid-----~~g~~---~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
..+.+.||-|+. .+|.. ..+..+-+.|+++|++++-....
T Consensus 132 rd~~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~ 179 (283)
T COG2230 132 RDFEEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG 179 (283)
T ss_pred cccccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence 223345777754 44542 34678889999999998776544
No 212
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.93 E-value=0.0026 Score=64.07 Aligned_cols=75 Identities=19% Similarity=0.225 Sum_probs=56.8
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChh---------------------hHHHHHHHcCCcEEecCCCH--H
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPK---------------------KESEAISKLGADAFLVSSDP--A 239 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~---------------------~~~~~~~~~g~~~v~~~~~~--~ 239 (359)
.+++|+|+|+|+.|+.++..++..|.+|+++.+.+. +.+.+ +++|++..++..-. -
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~-~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIF-TAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHH-HHCCeEEEcCCccCCcC
Confidence 489999999999999999999999999999987763 33444 67887766554321 1
Q ss_pred HHHHhcCCccEEEECCCCh
Q 018246 240 KVKAAMGTMDYIIDTVSAV 258 (359)
Q Consensus 240 ~~~~~~~~~d~vid~~g~~ 258 (359)
.+..+..++|.||.++|..
T Consensus 388 ~~~~l~~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFSDLTSEYDAVFIGVGTY 406 (639)
T ss_pred CHHHHHhcCCEEEEeCCCC
Confidence 2334456899999999874
No 213
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.016 Score=51.32 Aligned_cols=73 Identities=22% Similarity=0.302 Sum_probs=53.3
Q ss_pred CEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-Cc---EEecCCCHHHHHHh--------cCCccEE
Q 018246 185 KHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLG-AD---AFLVSSDPAKVKAA--------MGTMDYI 251 (359)
Q Consensus 185 ~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g-~~---~v~~~~~~~~~~~~--------~~~~d~v 251 (359)
+++||.|+ |.+|...++.+...|++|++++++++..+.+.+..+ .. ...|..+.+.+.++ .+.+|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 46899986 999999999888899999999999988777745443 11 23455554433322 3478999
Q ss_pred EECCCC
Q 018246 252 IDTVSA 257 (359)
Q Consensus 252 id~~g~ 257 (359)
+.++|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 999885
No 214
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0061 Score=53.65 Aligned_cols=74 Identities=20% Similarity=0.262 Sum_probs=52.6
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCC-cEEecCCCHHHHHHhcCCccEEEECCCC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPK-KESEAISKLGA-DAFLVSSDPAKVKAAMGTMDYIIDTVSA 257 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~-~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~d~vid~~g~ 257 (359)
.+++++|.|+ |++|..+++.+...|++|+++++++. +.+.. ..... ....|-.+.+.+.+..+.+|++++++|.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESN-DESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhh-ccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 4678999986 99999999999999999999998762 22222 11111 1234555556666666789999999975
No 215
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.92 E-value=0.0097 Score=53.32 Aligned_cols=94 Identities=18% Similarity=0.222 Sum_probs=66.5
Q ss_pred cchhhhhhhHhHhcCCCCCCCEEEEECCch-HHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHH
Q 018246 165 LCAGITVYSPMKYYGMTEPGKHLGVAGLGG-LGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKA 243 (359)
Q Consensus 165 ~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~-vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 243 (359)
+++.......++..+.--.|++|+|+|.|. +|...+.++...|++|++..+....+ .+
T Consensus 140 p~T~~gii~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L---------------------~~ 198 (283)
T PRK14192 140 SATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNL---------------------PE 198 (283)
T ss_pred CCcHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhH---------------------HH
Confidence 444433344454554446889999999976 99999999999999888887632221 22
Q ss_pred hcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCC
Q 018246 244 AMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 244 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
....+|+++.++|.+..+. ...++++..++++|...
T Consensus 199 ~~~~aDIvI~AtG~~~~v~--~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 199 LVKQADIIVGAVGKPELIK--KDWIKQGAVVVDAGFHP 234 (283)
T ss_pred HhccCCEEEEccCCCCcCC--HHHcCCCCEEEEEEEee
Confidence 2357899999998766333 35689999999998654
No 216
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.92 E-value=0.0088 Score=51.34 Aligned_cols=92 Identities=25% Similarity=0.290 Sum_probs=63.2
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCcEEecCCCH--HHHHHhcCCccEEEE---
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS---KLGADAFLVSSDP--AKVKAAMGTMDYIID--- 253 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~---~~g~~~v~~~~~~--~~~~~~~~~~d~vid--- 253 (359)
-+|.+||-+|+|+ |+++.-+|+ .|++|+++|.+++-.+.+.. +-|.. +++... +.+.+..+.||+|+.
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~~~FDvV~cmEV 133 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLASAGGQFDVVTCMEV 133 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCCeeEEecCChHHHHHHHHhhhhcccc--ccchhhhHHHHHhcCCCccEEEEhhH
Confidence 3788999999854 566666665 58999999999998888721 22222 445443 233333358999986
Q ss_pred --CCCChh-hHHHHHhccccCCEEEEe
Q 018246 254 --TVSAVH-SLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 254 --~~g~~~-~~~~~~~~l~~~G~~v~~ 277 (359)
.+..+. .+..+.++++|+|.++..
T Consensus 134 lEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 134 LEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred HHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 445444 568899999999998765
No 217
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.92 E-value=0.002 Score=48.51 Aligned_cols=90 Identities=19% Similarity=0.162 Sum_probs=61.2
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhhHH
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLA 262 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 262 (359)
.|.+|||+|+|.+|..-++.+...|++|++++... +.. + --.+. . .+. ......++++|+.+.+.+..-+
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~---~~~-~-~~i~~-~-~~~---~~~~l~~~~lV~~at~d~~~n~ 75 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI---EFS-E-GLIQL-I-RRE---FEEDLDGADLVFAATDDPELNE 75 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE---HHH-H-TSCEE-E-ESS----GGGCTTESEEEE-SS-HHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch---hhh-h-hHHHH-H-hhh---HHHHHhhheEEEecCCCHHHHH
Confidence 57899999999999999999999999999999886 122 2 11221 1 111 1223458999999999888444
Q ss_pred HHHhccccCCEEEEecCCCC
Q 018246 263 PLLGLLKVNGKLVTVGLPEK 282 (359)
Q Consensus 263 ~~~~~l~~~G~~v~~g~~~~ 282 (359)
...+..+..|.++.+.....
T Consensus 76 ~i~~~a~~~~i~vn~~D~p~ 95 (103)
T PF13241_consen 76 AIYADARARGILVNVVDDPE 95 (103)
T ss_dssp HHHHHHHHTTSEEEETT-CC
T ss_pred HHHHHHhhCCEEEEECCCcC
Confidence 55566666899998876554
No 218
>PRK09186 flagellin modification protein A; Provisional
Probab=96.91 E-value=0.012 Score=51.85 Aligned_cols=74 Identities=20% Similarity=0.229 Sum_probs=53.6
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCc---E-EecCCCHHHHHHhc-------C
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL----GAD---A-FLVSSDPAKVKAAM-------G 246 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~----g~~---~-v~~~~~~~~~~~~~-------~ 246 (359)
.++++||.|+ |.+|...+..+...|++|+++++++++.+.+.+++ +.. . ..|-.+.+.+..+. +
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4688999986 99999999999999999999999988776554443 211 1 23555554443332 3
Q ss_pred CccEEEECCC
Q 018246 247 TMDYIIDTVS 256 (359)
Q Consensus 247 ~~d~vid~~g 256 (359)
++|+++.+.+
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 6899999885
No 219
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.91 E-value=0.0085 Score=53.17 Aligned_cols=75 Identities=21% Similarity=0.254 Sum_probs=55.0
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc---EEecCCCHHHHHHh-------cCCccEE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD---AFLVSSDPAKVKAA-------MGTMDYI 251 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~-------~~~~d~v 251 (359)
+++++||.|+ |++|..+++.+...|++|+++++++++.+.+.++++.. ...|..+.+.+..+ .+.+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4678999986 99999999999999999999999988887775555532 22344444333222 2478999
Q ss_pred EECCCC
Q 018246 252 IDTVSA 257 (359)
Q Consensus 252 id~~g~ 257 (359)
++++|.
T Consensus 85 i~~ag~ 90 (263)
T PRK06200 85 VGNAGI 90 (263)
T ss_pred EECCCC
Confidence 999873
No 220
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.012 Score=51.12 Aligned_cols=75 Identities=24% Similarity=0.385 Sum_probs=51.4
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE-EecCCCHHHHHHh-------cCCccE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GADA-FLVSSDPAKVKAA-------MGTMDY 250 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~~-v~~~~~~~~~~~~-------~~~~d~ 250 (359)
+++++||+|+ |.+|..+++.+.+.|++|+++++++++.....+++ +... ..|..+.+.+..+ .+++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 4789999986 99999999998888999999999876644432322 2222 2344444333222 247999
Q ss_pred EEECCCC
Q 018246 251 IIDTVSA 257 (359)
Q Consensus 251 vid~~g~ 257 (359)
++.+.+.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9998874
No 221
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.91 E-value=0.0072 Score=53.91 Aligned_cols=80 Identities=14% Similarity=0.248 Sum_probs=57.6
Q ss_pred hhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCC
Q 018246 169 ITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGT 247 (359)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 247 (359)
...+.+++..+. ..+++++|+|+|+.+++++..++..|+ +|+++.|++++.+.+.+.++... . +.. ....
T Consensus 108 ~Gf~~~L~~~~~-~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~--~~~--~~~~ 178 (272)
T PRK12550 108 IAIAKLLASYQV-PPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----R--PDL--GGIE 178 (272)
T ss_pred HHHHHHHHhcCC-CCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----h--hhc--cccc
Confidence 334455554443 456789999999999999999999998 79999999999888866665221 1 011 1135
Q ss_pred ccEEEECCCC
Q 018246 248 MDYIIDTVSA 257 (359)
Q Consensus 248 ~d~vid~~g~ 257 (359)
+|++++|+..
T Consensus 179 ~dlvINaTp~ 188 (272)
T PRK12550 179 ADILVNVTPI 188 (272)
T ss_pred CCEEEECCcc
Confidence 8999999863
No 222
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.0068 Score=53.69 Aligned_cols=77 Identities=21% Similarity=0.315 Sum_probs=55.8
Q ss_pred CCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc----EEecCCCHHHHHHh-------cCCcc
Q 018246 182 EPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD----AFLVSSDPAKVKAA-------MGTMD 249 (359)
Q Consensus 182 ~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~~~-------~~~~d 249 (359)
-++.++||.|+ |.+|..++..+...|++|+++++++++.+.+.+..... ...|..+.+.+..+ .+++|
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 46789999986 99999999999999999999999887776664443322 23355554433322 24799
Q ss_pred EEEECCCCh
Q 018246 250 YIIDTVSAV 258 (359)
Q Consensus 250 ~vid~~g~~ 258 (359)
+|+.+.|..
T Consensus 89 ~vi~~ag~~ 97 (264)
T PRK12829 89 VLVNNAGIA 97 (264)
T ss_pred EEEECCCCC
Confidence 999988753
No 223
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.88 E-value=0.0013 Score=59.12 Aligned_cols=134 Identities=25% Similarity=0.352 Sum_probs=72.4
Q ss_pred cceEEEeeCCceEECCCCCCccccccccchhhh--hhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEe
Q 018246 138 YSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGIT--VYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVIS 214 (359)
Q Consensus 138 ~a~~~~~~~~~~~~lp~~l~~~~aa~l~~~~~t--a~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~ 214 (359)
|.+|-.-+.+.++.|.+++.+-..- ...| .+.++.+. ..+|++||-+|+|. |.+++..++ +|+ +|++++
T Consensus 120 w~~~~~~~~~~~I~idPg~AFGTG~----H~TT~lcl~~l~~~--~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~D 191 (295)
T PF06325_consen 120 WEEYPEPPDEIVIEIDPGMAFGTGH----HPTTRLCLELLEKY--VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAID 191 (295)
T ss_dssp T----SSTTSEEEEESTTSSS-SSH----CHHHHHHHHHHHHH--SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEE
T ss_pred CcccCCCCCcEEEEECCCCcccCCC----CHHHHHHHHHHHHh--ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEec
Confidence 4555222445677777776655542 1111 12334444 36889999988642 334443333 588 899999
Q ss_pred CChhhHHHHHH---HcCC-cEEecCCCHHHHHHhcCCccEEEECCCChhh---HHHHHhccccCCEEEEecCCCC
Q 018246 215 TSPKKESEAIS---KLGA-DAFLVSSDPAKVKAAMGTMDYIIDTVSAVHS---LAPLLGLLKVNGKLVTVGLPEK 282 (359)
Q Consensus 215 ~~~~~~~~~~~---~~g~-~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~---~~~~~~~l~~~G~~v~~g~~~~ 282 (359)
-++...+.+.+ .-|. ..+.-....+ ...+.||+|+-+.-.... +....+.|+++|.+++.|....
T Consensus 192 iDp~Av~~a~~N~~~N~~~~~~~v~~~~~---~~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~~ 263 (295)
T PF06325_consen 192 IDPLAVEAARENAELNGVEDRIEVSLSED---LVEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILEE 263 (295)
T ss_dssp SSCHHHHHHHHHHHHTT-TTCEEESCTSC---TCCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEGG
T ss_pred CCHHHHHHHHHHHHHcCCCeeEEEEEecc---cccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccHH
Confidence 98876555522 2222 2221111111 112589999987776542 3456678999999999987653
No 224
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=96.84 E-value=0.0096 Score=54.76 Aligned_cols=94 Identities=18% Similarity=0.246 Sum_probs=66.2
Q ss_pred CCCCEEEEECCchHHHHHHHHHH-HCCC-eEEEEeCChhhHHHHHHHc----CCcEEecCCCHHHHHHhcCCccEEEECC
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGK-AFGL-KVTVISTSPKKESEAISKL----GADAFLVSSDPAKVKAAMGTMDYIIDTV 255 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~-~~g~-~V~~v~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~d~vid~~ 255 (359)
+...+++|+|+|..|.+.+..+. ..+. +|.+..|++++.+.+.+++ |.. +....+ +.+.....|+|+.|+
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~~---~~~av~~aDiVvtaT 202 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAATD---PRAAMSGADIIVTTT 202 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeCC---HHHHhccCCEEEEec
Confidence 45678999999999988887776 4676 8999999999987776655 432 222222 334446899999998
Q ss_pred CChh-hHHHHHhccccCCEEEEecCCC
Q 018246 256 SAVH-SLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 256 g~~~-~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+... .+.. ..++++-.+..+|...
T Consensus 203 ~s~~p~i~~--~~l~~g~~i~~vg~~~ 227 (326)
T TIGR02992 203 PSETPILHA--EWLEPGQHVTAMGSDA 227 (326)
T ss_pred CCCCcEecH--HHcCCCcEEEeeCCCC
Confidence 7654 2322 3578888888888654
No 225
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.82 E-value=0.0084 Score=48.82 Aligned_cols=91 Identities=16% Similarity=0.069 Sum_probs=59.6
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhhHH
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLA 262 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 262 (359)
.|.+|+|+|+|.+|..-++.+...|++|++++ ++..+.+ ++++.-... .+. ....-..++|+|+-+++... .+
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIs--p~~~~~l-~~l~~i~~~-~~~--~~~~dl~~a~lViaaT~d~e-~N 84 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGAFVTVVS--PEICKEM-KELPYITWK-QKT--FSNDDIKDAHLIYAATNQHA-VN 84 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEc--CccCHHH-HhccCcEEE-ecc--cChhcCCCceEEEECCCCHH-HH
Confidence 67899999999999999999888999999885 3343444 344421111 111 11111247999999999888 76
Q ss_pred HHHhccccCCEEEEecCC
Q 018246 263 PLLGLLKVNGKLVTVGLP 280 (359)
Q Consensus 263 ~~~~~l~~~G~~v~~g~~ 280 (359)
..+...+..+.++.....
T Consensus 85 ~~i~~~a~~~~~vn~~d~ 102 (157)
T PRK06719 85 MMVKQAAHDFQWVNVVSD 102 (157)
T ss_pred HHHHHHHHHCCcEEECCC
Confidence 666656554445555443
No 226
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.0067 Score=54.95 Aligned_cols=75 Identities=23% Similarity=0.327 Sum_probs=53.4
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GAD---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
.+.+++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ +.+ ...|-.+.+.+.++ .+.+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999986 99999999999889999999999988776653332 322 12344444333332 2478
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|++++++|.
T Consensus 119 d~li~~AG~ 127 (293)
T PRK05866 119 DILINNAGR 127 (293)
T ss_pred CEEEECCCC
Confidence 999999874
No 227
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.81 E-value=0.0063 Score=54.34 Aligned_cols=102 Identities=24% Similarity=0.260 Sum_probs=60.4
Q ss_pred hhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCc--EEecCCCHHHHHHhcC
Q 018246 172 YSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS---KLGAD--AFLVSSDPAKVKAAMG 246 (359)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~---~~g~~--~v~~~~~~~~~~~~~~ 246 (359)
+..+.....+++|++||-+|+| -|-++..+|+..|++|+++..+++..+++.+ +.|.. ..+...+. ..+..
T Consensus 51 ~~~~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~---~~~~~ 126 (273)
T PF02353_consen 51 LDLLCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDY---RDLPG 126 (273)
T ss_dssp HHHHHTTTT--TT-EEEEES-T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-G---GG---
T ss_pred HHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeec---cccCC
Confidence 3334445556999999999987 4667778888889999999999998877733 34421 11111111 12334
Q ss_pred CccEEEE-----CCCCh---hhHHHHHhccccCCEEEEe
Q 018246 247 TMDYIID-----TVSAV---HSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 247 ~~d~vid-----~~g~~---~~~~~~~~~l~~~G~~v~~ 277 (359)
.||.|+. .+|.. ..+..+-+.|+|+|+++.-
T Consensus 127 ~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 127 KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred CCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 8898865 34432 2467888999999998754
No 228
>PLN00203 glutamyl-tRNA reductase
Probab=96.81 E-value=0.011 Score=57.48 Aligned_cols=97 Identities=19% Similarity=0.235 Sum_probs=66.6
Q ss_pred CCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChh--h
Q 018246 184 GKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVH--S 260 (359)
Q Consensus 184 g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--~ 260 (359)
+.+|+|+|+|.+|.+++..+...|+ +|+++.++.++.+.+.++++...+ .....+.......+.|+||.|++... .
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~~dl~~al~~aDVVIsAT~s~~pvI 344 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPLDEMLACAAEADVVFTSTSSETPLF 344 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecHhhHHHHHhcCCEEEEccCCCCCee
Confidence 6889999999999999999999998 899999999998888666742111 11122233444568999999987654 1
Q ss_pred HHHHHhcccc----CC---EEEEecCCC
Q 018246 261 LAPLLGLLKV----NG---KLVTVGLPE 281 (359)
Q Consensus 261 ~~~~~~~l~~----~G---~~v~~g~~~ 281 (359)
....++.+.+ .+ .+++++.+.
T Consensus 345 ~~e~l~~~~~~~~~~~~~~~~IDLAvPR 372 (519)
T PLN00203 345 LKEHVEALPPASDTVGGKRLFVDISVPR 372 (519)
T ss_pred CHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence 2334444322 12 467777654
No 229
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=96.80 E-value=0.031 Score=49.32 Aligned_cols=154 Identities=19% Similarity=0.157 Sum_probs=84.6
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCC----
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSA---- 257 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~---- 257 (359)
.++.+||-+|+|. |..+..+++ .|.+|++++.+++.++.+.+......++..+-. .+.-....+|+|+....-
T Consensus 41 ~~~~~vLDiGcG~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~V~s~~~l~~~~ 117 (251)
T PRK10258 41 RKFTHVLDAGCGP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDIE-SLPLATATFDLAWSNLAVQWCG 117 (251)
T ss_pred cCCCeEEEeeCCC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCcc-cCcCCCCcEEEEEECchhhhcC
Confidence 4677899999875 655555554 588999999999988888443332222211111 111111369999875431
Q ss_pred --hhhHHHHHhccccCCEEEEecCCCCCeeeCHHHHHhc-CcEEEEeecCCHHHHHHHHHHHHhCCCcccE--EEEcccc
Q 018246 258 --VHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGA-RRLVGGSNVGGMKETQEMLDFCAKHNIAADI--ELVRMDQ 332 (359)
Q Consensus 258 --~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k-~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~~--~~~~l~~ 332 (359)
...+..+.+.|+|+|.++......+.+.- ....+.. ...-....+.+.+++.. ++..-.+.... ..+.+++
T Consensus 118 d~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~e-l~~~~~~~~~~~~~~~~~~~~~l~~---~l~~~~~~~~~~~~~~~f~~ 193 (251)
T PRK10258 118 NLSTALRELYRVVRPGGVVAFTTLVQGSLPE-LHQAWQAVDERPHANRFLPPDAIEQ---ALNGWRYQHHIQPITLWFDD 193 (251)
T ss_pred CHHHHHHHHHHHcCCCeEEEEEeCCCCchHH-HHHHHHHhccCCccccCCCHHHHHH---HHHhCCceeeeeEEEEECCC
Confidence 23578889999999999887544332211 1111110 00111222333344443 33333343333 3456777
Q ss_pred HHHHHHHHHc
Q 018246 333 INTAMERLAK 342 (359)
Q Consensus 333 ~~~a~~~~~~ 342 (359)
..+.++.++.
T Consensus 194 ~~~~l~~lk~ 203 (251)
T PRK10258 194 ALSAMRSLKG 203 (251)
T ss_pred HHHHHHHHHH
Confidence 7777777764
No 230
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.01 Score=51.97 Aligned_cols=75 Identities=25% Similarity=0.306 Sum_probs=54.7
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHH-------HhcCCccEE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADA---FLVSSDPAKVK-------AAMGTMDYI 251 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~-------~~~~~~d~v 251 (359)
++++++|.|+ |.+|...++.+...|++|+++++++++.+.+.++++.+. ..|..+.+.+. +..+++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999986 999999999999999999999998877776656666432 12434433222 222478999
Q ss_pred EECCCC
Q 018246 252 IDTVSA 257 (359)
Q Consensus 252 id~~g~ 257 (359)
+.++|.
T Consensus 85 i~~ag~ 90 (249)
T PRK06500 85 FINAGV 90 (249)
T ss_pred EECCCC
Confidence 998874
No 231
>PRK04457 spermidine synthase; Provisional
Probab=96.78 E-value=0.029 Score=49.91 Aligned_cols=95 Identities=18% Similarity=0.221 Sum_probs=66.3
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCC----c--EEecCCCHHHHHHhcCCccEEE-E
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFG-LKVTVISTSPKKESEAISKLGA----D--AFLVSSDPAKVKAAMGTMDYII-D 253 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g-~~V~~v~~~~~~~~~~~~~~g~----~--~v~~~~~~~~~~~~~~~~d~vi-d 253 (359)
.+.++||++|+|. |.++..+++... .+|++++.+++-.+.+.+.++. . .++..+..+.+.+..+.+|+|+ |
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~D 143 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILVD 143 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEEe
Confidence 3557899999865 777777877774 5999999999988888555552 1 2333333455555455899997 4
Q ss_pred CCCC---------hhhHHHHHhccccCCEEEEe
Q 018246 254 TVSA---------VHSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 254 ~~g~---------~~~~~~~~~~l~~~G~~v~~ 277 (359)
.... ...+..+.+.|+++|.++.-
T Consensus 144 ~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 144 GFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred CCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 3221 24578899999999999863
No 232
>PRK06196 oxidoreductase; Provisional
Probab=96.78 E-value=0.01 Score=54.38 Aligned_cols=75 Identities=25% Similarity=0.337 Sum_probs=54.5
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-Cc-EEecCCCHHHHHHhc-------CCccEEE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLG-AD-AFLVSSDPAKVKAAM-------GTMDYII 252 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g-~~-~v~~~~~~~~~~~~~-------~~~d~vi 252 (359)
.+.+|||.|+ |++|..++..+...|++|+++++++++.+.+.+++. .. ...|..+.+.+.++. +++|+++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 4678999986 999999999988899999999999887766544443 22 223555554433322 4799999
Q ss_pred ECCCC
Q 018246 253 DTVSA 257 (359)
Q Consensus 253 d~~g~ 257 (359)
+++|.
T Consensus 105 ~nAg~ 109 (315)
T PRK06196 105 NNAGV 109 (315)
T ss_pred ECCCC
Confidence 98873
No 233
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.01 Score=52.92 Aligned_cols=74 Identities=24% Similarity=0.416 Sum_probs=54.8
Q ss_pred CCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-Cc-EEecCCCHHHHHH-------hcCCccEEEE
Q 018246 184 GKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLG-AD-AFLVSSDPAKVKA-------AMGTMDYIID 253 (359)
Q Consensus 184 g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g-~~-~v~~~~~~~~~~~-------~~~~~d~vid 253 (359)
+.++||.|+ |++|...++.+...|++|+++++++++.+.+.+.++ .. ...|..+.+.+.+ ..+++|++++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN 84 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 578999986 999999999888899999999999988777655555 22 2235555543322 2257899999
Q ss_pred CCCC
Q 018246 254 TVSA 257 (359)
Q Consensus 254 ~~g~ 257 (359)
+.|.
T Consensus 85 ~ag~ 88 (273)
T PRK07825 85 NAGV 88 (273)
T ss_pred CCCc
Confidence 9874
No 234
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.76 E-value=0.024 Score=49.87 Aligned_cols=75 Identities=21% Similarity=0.310 Sum_probs=53.1
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GAD---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
.+++|||.|+ |.+|...++.+...|++|+++++++++.+.+..++ +.. ...|..+.+.+..+ .+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999986 99999999988888999999999988765553332 322 22355554433332 2479
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|++|.+++.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999998874
No 235
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.0099 Score=52.79 Aligned_cols=75 Identities=17% Similarity=0.263 Sum_probs=53.9
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc-E--EecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GAD-A--FLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~-------~~~~ 248 (359)
++.++||.|+ |++|...++.+...|++|+++++++++.+.+.+.+ +.. . ..|..+.+.+.++ .+++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999986 89999999999999999999999987766553332 322 1 2455555443332 2479
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|++++++|.
T Consensus 89 d~vi~~Ag~ 97 (263)
T PRK07814 89 DIVVNNVGG 97 (263)
T ss_pred CEEEECCCC
Confidence 999998873
No 236
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.74 E-value=0.011 Score=52.54 Aligned_cols=74 Identities=24% Similarity=0.232 Sum_probs=53.2
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc---EEecCCCHHHHHH----h---cCCccEE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD---AFLVSSDPAKVKA----A---MGTMDYI 251 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~----~---~~~~d~v 251 (359)
++++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+..+.+ ...|..+.+.+.+ . .+.+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4688999986 99999999999999999999999988777764444422 1234444432222 2 2478999
Q ss_pred EECCC
Q 018246 252 IDTVS 256 (359)
Q Consensus 252 id~~g 256 (359)
+++.|
T Consensus 84 i~~Ag 88 (262)
T TIGR03325 84 IPNAG 88 (262)
T ss_pred EECCC
Confidence 99986
No 237
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.72 E-value=0.011 Score=52.98 Aligned_cols=96 Identities=19% Similarity=0.169 Sum_probs=74.4
Q ss_pred ccccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 018246 162 APLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK 240 (359)
Q Consensus 162 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (359)
..+||+.......++..+---.|++|.|+|. +.+|.-.+.++...|++|++..+....
T Consensus 137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~--------------------- 195 (301)
T PRK14194 137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTD--------------------- 195 (301)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCC---------------------
Confidence 3567777777777776665468999999997 599999999999999999998655322
Q ss_pred HHHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCC
Q 018246 241 VKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLP 280 (359)
Q Consensus 241 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (359)
+.+.....|+|+-++|.+..+...+ +++|..++++|..
T Consensus 196 l~e~~~~ADIVIsavg~~~~v~~~~--ik~GaiVIDvgin 233 (301)
T PRK14194 196 AKALCRQADIVVAAVGRPRLIDADW--LKPGAVVIDVGIN 233 (301)
T ss_pred HHHHHhcCCEEEEecCChhcccHhh--ccCCcEEEEeccc
Confidence 2333456799999999987666554 8999999999864
No 238
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.72 E-value=0.015 Score=49.95 Aligned_cols=98 Identities=24% Similarity=0.252 Sum_probs=64.4
Q ss_pred cCCCCCCCEEEEECCchHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHH---cCCc--EEecCCCHHHHHHhcCCccE
Q 018246 178 YGMTEPGKHLGVAGLGGLGHVAVKIGKAFG--LKVTVISTSPKKESEAISK---LGAD--AFLVSSDPAKVKAAMGTMDY 250 (359)
Q Consensus 178 ~~~~~~g~~VlI~G~g~vG~~a~~la~~~g--~~V~~v~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~~~~~d~ 250 (359)
...++++++||-+|+|. |..+..+++..+ .+|+.++.+++-.+.+.+. .|.. .++..+..... .-...||+
T Consensus 71 ~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~-~~~~~fD~ 148 (212)
T PRK13942 71 LLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGY-EENAPYDR 148 (212)
T ss_pred HcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-CcCCCcCE
Confidence 33458999999998764 556677777665 4999999998877666333 3432 22222211100 01247999
Q ss_pred EEECCCChhhHHHHHhccccCCEEEEe
Q 018246 251 IIDTVSAVHSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 251 vid~~g~~~~~~~~~~~l~~~G~~v~~ 277 (359)
|+-............+.|+++|+++..
T Consensus 149 I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 149 IYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred EEECCCcccchHHHHHhhCCCcEEEEE
Confidence 987665555567889999999998875
No 239
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.013 Score=52.16 Aligned_cols=75 Identities=16% Similarity=0.205 Sum_probs=54.0
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCc---EEecCCCHHHHHHhc------CCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL----GAD---AFLVSSDPAKVKAAM------GTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~----g~~---~v~~~~~~~~~~~~~------~~~ 248 (359)
.|+++||.|+ +++|+++++.+...|++|+++++++++.+.+.+++ +.+ ...|-.+.+.+..+. +++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 4788999986 89999999999999999999999988776654433 322 223445543333221 479
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++++.|.
T Consensus 87 D~lv~nag~ 95 (263)
T PRK08339 87 DIFFFSTGG 95 (263)
T ss_pred cEEEECCCC
Confidence 999999874
No 240
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.71 E-value=0.016 Score=42.75 Aligned_cols=86 Identities=24% Similarity=0.350 Sum_probs=60.3
Q ss_pred EEEEECCchHHHHHHHHHHHCC---CeEEEE-eCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhhH
Q 018246 186 HLGVAGLGGLGHVAVKIGKAFG---LKVTVI-STSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSL 261 (359)
Q Consensus 186 ~VlI~G~g~vG~~a~~la~~~g---~~V~~v-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 261 (359)
+|.|+|+|.+|.+.+.-+...| .+|+++ .+++++.+.+.++++...... +.. ++.+..|+||-|+.... +
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~-~~~----~~~~~advvilav~p~~-~ 74 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD-DNE----EAAQEADVVILAVKPQQ-L 74 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE-EHH----HHHHHTSEEEE-S-GGG-H
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC-ChH----HhhccCCEEEEEECHHH-H
Confidence 4778899999999999999999 689965 999999999878888654431 111 22236899999999876 5
Q ss_pred HHHHhc---cccCCEEEEe
Q 018246 262 APLLGL---LKVNGKLVTV 277 (359)
Q Consensus 262 ~~~~~~---l~~~G~~v~~ 277 (359)
...++. ..++..++.+
T Consensus 75 ~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 75 PEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp HHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhhccCCCEEEEe
Confidence 444444 4455555554
No 241
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.70 E-value=0.015 Score=52.89 Aligned_cols=106 Identities=13% Similarity=0.074 Sum_probs=74.0
Q ss_pred HhcCCCCCCCEEEEECCchHHHHHHHHHHH-CCC-eEEEEeCChhhHHHHHHHcCCc--EEecCCCHHHHHHhcCCccEE
Q 018246 176 KYYGMTEPGKHLGVAGLGGLGHVAVKIGKA-FGL-KVTVISTSPKKESEAISKLGAD--AFLVSSDPAKVKAAMGTMDYI 251 (359)
Q Consensus 176 ~~~~~~~~g~~VlI~G~g~vG~~a~~la~~-~g~-~V~~v~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~d~v 251 (359)
+...+ ....+++|+|+|..|.+.+..+.. .+. +|.+.++++++.+.+.+++... .+. . +.+.+...+.|+|
T Consensus 118 ~~La~-~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~---~~~~~av~~aDiV 192 (304)
T PRK07340 118 RTLAP-APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P---LDGEAIPEAVDLV 192 (304)
T ss_pred HHhCC-CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E---CCHHHHhhcCCEE
Confidence 34444 466789999999999998888864 576 8999999999888776766421 111 1 1233444689999
Q ss_pred EECCCChh-hHHHHHhccccCCEEEEecCCCC-CeeeCHH
Q 018246 252 IDTVSAVH-SLAPLLGLLKVNGKLVTVGLPEK-PLEVPIF 289 (359)
Q Consensus 252 id~~g~~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~ 289 (359)
+.|+++.. .+.. .++||-.+..+|.... ...++..
T Consensus 193 itaT~s~~Pl~~~---~~~~g~hi~~iGs~~p~~~El~~~ 229 (304)
T PRK07340 193 VTATTSRTPVYPE---AARAGRLVVAVGAFTPDMAELAPR 229 (304)
T ss_pred EEccCCCCceeCc---cCCCCCEEEecCCCCCCcccCCHH
Confidence 99888655 3433 3789999999987653 3455543
No 242
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.70 E-value=0.015 Score=55.05 Aligned_cols=75 Identities=21% Similarity=0.270 Sum_probs=55.0
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC--Cc-EEecCCCHHHHHHhcCCccEEEECCCC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLG--AD-AFLVSSDPAKVKAAMGTMDYIIDTVSA 257 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g--~~-~v~~~~~~~~~~~~~~~~d~vid~~g~ 257 (359)
.+++++|.|+ |++|.+.+..+...|++|+++++++++.+...+..+ .. ...|..+.+.+.+..+++|+++.+.|.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi 255 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI 255 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence 4679999986 999999999888899999999998776544322222 11 223556666666666789999998764
No 243
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.70 E-value=0.0063 Score=47.48 Aligned_cols=88 Identities=22% Similarity=0.287 Sum_probs=55.8
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEe-CChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhhH
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVIS-TSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSL 261 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~-~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 261 (359)
+.-+|-|+|+|-+|......++..|.+|..+. ++++..+.+...++...+.+. .+.....|++|-++.... +
T Consensus 9 ~~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~------~~~~~~aDlv~iavpDda-I 81 (127)
T PF10727_consen 9 ARLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDL------EEILRDADLVFIAVPDDA-I 81 (127)
T ss_dssp ---EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----T------TGGGCC-SEEEE-S-CCH-H
T ss_pred CccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccc------ccccccCCEEEEEechHH-H
Confidence 34578899999999999999999999888874 555566666555555444332 234567999999999987 8
Q ss_pred HHHHhccccC-----CEEEEe
Q 018246 262 APLLGLLKVN-----GKLVTV 277 (359)
Q Consensus 262 ~~~~~~l~~~-----G~~v~~ 277 (359)
...++.|... |++|.-
T Consensus 82 ~~va~~La~~~~~~~g~iVvH 102 (127)
T PF10727_consen 82 AEVAEQLAQYGAWRPGQIVVH 102 (127)
T ss_dssp HHHHHHHHCC--S-TT-EEEE
T ss_pred HHHHHHHHHhccCCCCcEEEE
Confidence 8777777655 555543
No 244
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.032 Score=49.76 Aligned_cols=72 Identities=22% Similarity=0.280 Sum_probs=50.8
Q ss_pred EEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc----EEecCCCHHHHHHh-------cCCccE
Q 018246 186 HLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK---LGAD----AFLVSSDPAKVKAA-------MGTMDY 250 (359)
Q Consensus 186 ~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~---~g~~----~v~~~~~~~~~~~~-------~~~~d~ 250 (359)
+++|.|+ |++|..+++.+...|++|++++++++..+.+.++ .+.. ...|..+.+.+.++ .+++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 6889886 9999999999999999999999988766554333 2322 12455554433322 246899
Q ss_pred EEECCCC
Q 018246 251 IIDTVSA 257 (359)
Q Consensus 251 vid~~g~ 257 (359)
++.+.|.
T Consensus 82 lv~~ag~ 88 (272)
T PRK07832 82 VMNIAGI 88 (272)
T ss_pred EEECCCC
Confidence 9999974
No 245
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.01 Score=52.46 Aligned_cols=75 Identities=24% Similarity=0.313 Sum_probs=53.8
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-----CCc---EEecCCCHHHHHHh-------cC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL-----GAD---AFLVSSDPAKVKAA-------MG 246 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~-----g~~---~v~~~~~~~~~~~~-------~~ 246 (359)
.++++||.|+ |++|..+++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+.+.++ .+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4678999986 99999999999999999999999988776654443 211 12344544333332 24
Q ss_pred CccEEEECCCC
Q 018246 247 TMDYIIDTVSA 257 (359)
Q Consensus 247 ~~d~vid~~g~ 257 (359)
.+|+++.++|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 79999999874
No 246
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.024 Score=50.24 Aligned_cols=75 Identities=19% Similarity=0.310 Sum_probs=53.1
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc--CCc-E--EecCCCHHHHHHh------cCCccE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL--GAD-A--FLVSSDPAKVKAA------MGTMDY 250 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~--g~~-~--v~~~~~~~~~~~~------~~~~d~ 250 (359)
++.++||+|+ |++|...+..+...|++|+++++++++.+.+..++ +.. . ..|..+.+.+..+ .+.+|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 4678999986 99999999999899999999999988877664443 211 1 1244444333222 247899
Q ss_pred EEECCCC
Q 018246 251 IIDTVSA 257 (359)
Q Consensus 251 vid~~g~ 257 (359)
++.++|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9999875
No 247
>PLN03075 nicotianamine synthase; Provisional
Probab=96.67 E-value=0.01 Score=53.19 Aligned_cols=106 Identities=9% Similarity=0.073 Sum_probs=69.9
Q ss_pred hhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHHcCC----cEEecCCCHHHHHH--
Q 018246 172 YSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFG--LKVTVISTSPKKESEAISKLGA----DAFLVSSDPAKVKA-- 243 (359)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g--~~V~~v~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~-- 243 (359)
+..+..... .+.++|+-+|+|+.++.++.+++... .+++.++.+++..+.+.+.+.. ..-+.....+....
T Consensus 113 ~~~L~~~~~-~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~ 191 (296)
T PLN03075 113 FDLLSQHVN-GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTE 191 (296)
T ss_pred HHHHHHhhc-CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhccc
Confidence 334444444 37789999999999999988887653 4899999999988877444421 11111111111111
Q ss_pred hcCCccEEEECC-------CChhhHHHHHhccccCCEEEEec
Q 018246 244 AMGTMDYIIDTV-------SAVHSLAPLLGLLKVNGKLVTVG 278 (359)
Q Consensus 244 ~~~~~d~vid~~-------g~~~~~~~~~~~l~~~G~~v~~g 278 (359)
..++||+||..+ .-...++...+.|+|||.++.-.
T Consensus 192 ~l~~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 192 SLKEYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred ccCCcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 125899998765 12236789999999999988654
No 248
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.67 E-value=0.021 Score=49.58 Aligned_cols=102 Identities=14% Similarity=0.196 Sum_probs=65.4
Q ss_pred hhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCC---eEEEEeCC----hhhH-------HHHHHHcCCcEEecCCC
Q 018246 172 YSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL---KVTVISTS----PKKE-------SEAISKLGADAFLVSSD 237 (359)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~---~V~~v~~~----~~~~-------~~~~~~~g~~~v~~~~~ 237 (359)
+.+++..+.--.+.+|+|+|+|..|..++..+...|+ ++++++++ .+|. ..+.++++... .+.
T Consensus 13 ~~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~~-- 89 (226)
T cd05311 13 LNALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TGG-- 89 (226)
T ss_pred HHHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-ccC--
Confidence 4455554432467899999999999999999999997 49999998 4442 22324443221 111
Q ss_pred HHHHHHhcCCccEEEECCCChhhHHHHHhccccCCEEEEec
Q 018246 238 PAKVKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVG 278 (359)
Q Consensus 238 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 278 (359)
.+.+...++|++|.+++....-...++.|.++..+..+.
T Consensus 90 --~l~~~l~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 90 --TLKEALKGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred --CHHHHHhcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 122233469999999974332246677777776666554
No 249
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.67 E-value=0.034 Score=48.31 Aligned_cols=102 Identities=20% Similarity=0.261 Sum_probs=70.5
Q ss_pred CCCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCC---cEEe-cCCCHHHHHHhcCCccEEEEC
Q 018246 180 MTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGA---DAFL-VSSDPAKVKAAMGTMDYIIDT 254 (359)
Q Consensus 180 ~~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~---~~v~-~~~~~~~~~~~~~~~d~vid~ 254 (359)
...+|++||-+|+| .|-++..+++..|- +|+++|.+++-++.+.++... ..+- ...+.+.+.--...||+|..+
T Consensus 48 ~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~vt~~ 126 (238)
T COG2226 48 GIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDAVTIS 126 (238)
T ss_pred CCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCccCEEEee
Confidence 33589999998765 48888899998876 999999999998888655442 1110 011112221111378988876
Q ss_pred CCC------hhhHHHHHhccccCCEEEEecCCCC
Q 018246 255 VSA------VHSLAPLLGLLKVNGKLVTVGLPEK 282 (359)
Q Consensus 255 ~g~------~~~~~~~~~~l~~~G~~v~~g~~~~ 282 (359)
.|- ..++.+..|.|+|+|+++.+.....
T Consensus 127 fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p 160 (238)
T COG2226 127 FGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKP 160 (238)
T ss_pred ehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCC
Confidence 652 2368899999999999998876653
No 250
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.66 E-value=0.021 Score=50.51 Aligned_cols=75 Identities=19% Similarity=0.290 Sum_probs=53.5
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcE---EecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK---LGADA---FLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~~ 248 (359)
.+.++||.|+ |.+|..+++.+...|++|+++++++++.+.+.++ .+.+. ..|..+.+.+.++ .+++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999987 9999999999999999999999998766555333 34332 1244454433322 2468
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++.+.|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999998874
No 251
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.0094 Score=53.02 Aligned_cols=74 Identities=28% Similarity=0.359 Sum_probs=52.6
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GAD---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
+++++||.|+ |++|...++.+...|++|+++++++++.+...+++ +.+ ..+|..+.+.+.++ .+++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999986 99999999999999999999999887765443332 322 12355555443332 2468
Q ss_pred cEEEECCC
Q 018246 249 DYIIDTVS 256 (359)
Q Consensus 249 d~vid~~g 256 (359)
|++|.+.|
T Consensus 88 D~vi~~ag 95 (264)
T PRK07576 88 DVLVSGAA 95 (264)
T ss_pred CEEEECCC
Confidence 99998876
No 252
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.014 Score=51.84 Aligned_cols=75 Identities=23% Similarity=0.297 Sum_probs=53.6
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CC-c---EEecCCCHHHHHHh-------cC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL----GA-D---AFLVSSDPAKVKAA-------MG 246 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~----g~-~---~v~~~~~~~~~~~~-------~~ 246 (359)
.+++++|.|+ +++|.+.++.+...|++|+++++++++.+...+++ +. + ...|..+.+.+.++ .+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4688999986 99999999999999999999999988766543332 11 1 12355555433332 24
Q ss_pred CccEEEECCCC
Q 018246 247 TMDYIIDTVSA 257 (359)
Q Consensus 247 ~~d~vid~~g~ 257 (359)
.+|++++++|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 78999999984
No 253
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.64 E-value=0.015 Score=49.64 Aligned_cols=96 Identities=24% Similarity=0.207 Sum_probs=63.7
Q ss_pred CCCCCCEEEEECCchHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHH---HcCCc---EEecCCCHHHHHHhcCCccEE
Q 018246 180 MTEPGKHLGVAGLGGLGHVAVKIGKAFG--LKVTVISTSPKKESEAIS---KLGAD---AFLVSSDPAKVKAAMGTMDYI 251 (359)
Q Consensus 180 ~~~~g~~VlI~G~g~vG~~a~~la~~~g--~~V~~v~~~~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~~~~~d~v 251 (359)
.++++++||-+|+|. |..++.+++..+ .+|+.++.+++-.+.+.+ +.+.. .++..+..+... ....||+|
T Consensus 69 ~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~-~~~~fD~I 146 (205)
T PRK13944 69 EPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLE-KHAPFDAI 146 (205)
T ss_pred CCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCc-cCCCccEE
Confidence 347899999998754 666677777664 599999999887665533 33422 223222111111 12479999
Q ss_pred EECCCChhhHHHHHhccccCCEEEEe
Q 018246 252 IDTVSAVHSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 252 id~~g~~~~~~~~~~~l~~~G~~v~~ 277 (359)
+-+.........+.+.|+++|+++..
T Consensus 147 i~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 147 IVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred EEccCcchhhHHHHHhcCcCcEEEEE
Confidence 87766555457888999999999764
No 254
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.64 E-value=0.016 Score=51.62 Aligned_cols=97 Identities=19% Similarity=0.265 Sum_probs=73.2
Q ss_pred ccccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 018246 162 APLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK 240 (359)
Q Consensus 162 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (359)
..+||+.......++...---.|++|+|+|. ..+|.-.+.++...|++|++..+... .
T Consensus 136 ~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~---------------------~ 194 (285)
T PRK14189 136 LFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR---------------------D 194 (285)
T ss_pred CCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC---------------------C
Confidence 3567776666666766654458999999997 55699999999999999998653321 1
Q ss_pred HHHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCC
Q 018246 241 VKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 241 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+.......|+|+-++|.+..+.. ..++++..++++|...
T Consensus 195 l~~~~~~ADIVV~avG~~~~i~~--~~ik~gavVIDVGin~ 233 (285)
T PRK14189 195 LAAHTRQADIVVAAVGKRNVLTA--DMVKPGATVIDVGMNR 233 (285)
T ss_pred HHHHhhhCCEEEEcCCCcCccCH--HHcCCCCEEEEccccc
Confidence 33444578999999998875544 8899999999999653
No 255
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.021 Score=50.67 Aligned_cols=76 Identities=21% Similarity=0.360 Sum_probs=54.1
Q ss_pred CCCCEEEEECC-c-hHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH----cCCcEE----ecCCCHHHHHHh-------
Q 018246 182 EPGKHLGVAGL-G-GLGHVAVKIGKAFGLKVTVISTSPKKESEAISK----LGADAF----LVSSDPAKVKAA------- 244 (359)
Q Consensus 182 ~~g~~VlI~G~-g-~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~----~g~~~v----~~~~~~~~~~~~------- 244 (359)
..++++||.|+ | ++|.++++.+...|++|+++++++++.+...++ ++...+ .|..+.+.+.++
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45789999986 6 799999999999999999999988776555332 343222 255554433332
Q ss_pred cCCccEEEECCCC
Q 018246 245 MGTMDYIIDTVSA 257 (359)
Q Consensus 245 ~~~~d~vid~~g~ 257 (359)
.+.+|+++.++|.
T Consensus 95 ~g~id~li~~ag~ 107 (262)
T PRK07831 95 LGRLDVLVNNAGL 107 (262)
T ss_pred cCCCCEEEECCCC
Confidence 2478999999984
No 256
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.013 Score=52.45 Aligned_cols=74 Identities=18% Similarity=0.236 Sum_probs=54.0
Q ss_pred CCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc---EEecCCCHHHHHHhc-------CCccEEE
Q 018246 184 GKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD---AFLVSSDPAKVKAAM-------GTMDYII 252 (359)
Q Consensus 184 g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~~-------~~~d~vi 252 (359)
++++||.|+ |++|...++.+...|++|+++++++++.+.+.+..+.. ...|..+.+.+.++. +++|+++
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv 83 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV 83 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 567999986 99999999999889999999999988877664433321 123555554433322 3689999
Q ss_pred ECCCC
Q 018246 253 DTVSA 257 (359)
Q Consensus 253 d~~g~ 257 (359)
.+.|.
T Consensus 84 ~~ag~ 88 (277)
T PRK06180 84 NNAGY 88 (277)
T ss_pred ECCCc
Confidence 99885
No 257
>PRK06128 oxidoreductase; Provisional
Probab=96.61 E-value=0.048 Score=49.51 Aligned_cols=99 Identities=15% Similarity=0.197 Sum_probs=63.5
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhh--HHH---HHHHcCCcE---EecCCCHHHHHHh-------cC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKK--ESE---AISKLGADA---FLVSSDPAKVKAA-------MG 246 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~--~~~---~~~~~g~~~---v~~~~~~~~~~~~-------~~ 246 (359)
.++++||.|+ |++|..++..+...|++|+++.++.+. .+. .+++.|.+. ..|..+.+.+.++ .+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 4678999986 999999999999999999888765331 122 223445332 1344554333322 24
Q ss_pred CccEEEECCCCh--------------------------hhHHHHHhccccCCEEEEecCCC
Q 018246 247 TMDYIIDTVSAV--------------------------HSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 247 ~~d~vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
++|++|.++|.. ..++.+...|+.+|+++.++...
T Consensus 134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~ 194 (300)
T PRK06128 134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQ 194 (300)
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcc
Confidence 799999988741 01234455567788999886543
No 258
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.60 E-value=0.016 Score=53.13 Aligned_cols=94 Identities=21% Similarity=0.248 Sum_probs=65.9
Q ss_pred EEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHhcCCccEEEECCCChh----
Q 018246 186 HLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFL-VSSDPAKVKAAMGTMDYIIDTVSAVH---- 259 (359)
Q Consensus 186 ~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~d~vid~~g~~~---- 259 (359)
+|+|+|+ |.+|...++.+...|.+|.+++|+.++...+ ...+.+.+. |..+.+.+.....++|+||++++...
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l-~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL-KEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH-hhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 6899986 9999999999999999999999987665544 445654432 45566667777779999999876321
Q ss_pred --------hHHHHHhccccCC--EEEEecCC
Q 018246 260 --------SLAPLLGLLKVNG--KLVTVGLP 280 (359)
Q Consensus 260 --------~~~~~~~~l~~~G--~~v~~g~~ 280 (359)
....+++.++..| +++.++..
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 0123445454444 78887653
No 259
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.032 Score=49.84 Aligned_cols=74 Identities=22% Similarity=0.268 Sum_probs=52.9
Q ss_pred CCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-E--EecCCCHHHHHHh-------cCCccEEE
Q 018246 184 GKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD-A--FLVSSDPAKVKAA-------MGTMDYII 252 (359)
Q Consensus 184 g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~-------~~~~d~vi 252 (359)
+.+|||.|+ |.+|..+++.+...|++|+++++++++.+.+.+.++.. . -.|..+.+.+.++ .+++|+++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 467999986 99999999988888999999999988877664444422 1 2344444333222 24789999
Q ss_pred ECCCC
Q 018246 253 DTVSA 257 (359)
Q Consensus 253 d~~g~ 257 (359)
.+.|.
T Consensus 83 ~~ag~ 87 (275)
T PRK08263 83 NNAGY 87 (275)
T ss_pred ECCCC
Confidence 99874
No 260
>PRK06194 hypothetical protein; Provisional
Probab=96.59 E-value=0.016 Score=52.14 Aligned_cols=75 Identities=27% Similarity=0.461 Sum_probs=53.0
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHhc-------CCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GADA---FLVSSDPAKVKAAM-------GTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~-------~~~ 248 (359)
.+.++||.|+ |++|...++.+...|++|++++++.++.+...+++ +... ..|..+.+.+.++. +.+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999986 99999999999889999999999877665553433 3221 22444444443332 368
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++.++|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999999885
No 261
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.014 Score=51.44 Aligned_cols=75 Identities=16% Similarity=0.229 Sum_probs=54.3
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GAD---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
.++++||.|+ |++|..+++.+...|++|++++++.++.+.+.+++ +.+ ...|..+.+.+.++ .+++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4788999986 99999999999999999999999988776664433 322 22355554433332 2479
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++.+.|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999998874
No 262
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.57 E-value=0.019 Score=50.37 Aligned_cols=74 Identities=24% Similarity=0.373 Sum_probs=52.4
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc---EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK---LGAD---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
+++++||.|+ |++|+.+++.+...|++|+++++++++.+.+.++ .+.. ...|-.+.+.+.++ .+++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5788999986 9999999999999999999999998776555332 2432 22344444333221 2468
Q ss_pred cEEEECCC
Q 018246 249 DYIIDTVS 256 (359)
Q Consensus 249 d~vid~~g 256 (359)
|++|.++|
T Consensus 84 d~vi~~ag 91 (253)
T PRK08217 84 NGLINNAG 91 (253)
T ss_pred CEEEECCC
Confidence 99999887
No 263
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.57 E-value=0.015 Score=51.24 Aligned_cols=75 Identities=25% Similarity=0.363 Sum_probs=53.5
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GADA---FLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 248 (359)
.++++||.|+ |.+|...++.+...|++|+++++++++.+.+.+++ |... ..|..+.+.+..+ .+.+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999986 99999999999889999999999987765543332 3221 1255554443333 2478
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|++|.+.|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999874
No 264
>PRK05717 oxidoreductase; Validated
Probab=96.56 E-value=0.023 Score=50.10 Aligned_cols=75 Identities=23% Similarity=0.292 Sum_probs=54.0
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc---EEecCCCHHHHHH----h---cCCccEE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD---AFLVSSDPAKVKA----A---MGTMDYI 251 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~----~---~~~~d~v 251 (359)
.|+++||.|+ |.+|..++..+...|++|+++++++++.+...++++.. ...|..+.+.+.+ + .+.+|++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 88 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL 88 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5788999986 99999999999889999999998877766654555532 2234455443322 2 2368999
Q ss_pred EECCCC
Q 018246 252 IDTVSA 257 (359)
Q Consensus 252 id~~g~ 257 (359)
+.+.|.
T Consensus 89 i~~ag~ 94 (255)
T PRK05717 89 VCNAAI 94 (255)
T ss_pred EECCCc
Confidence 998874
No 265
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.017 Score=51.69 Aligned_cols=75 Identities=19% Similarity=0.270 Sum_probs=53.9
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GADA---FLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 248 (359)
.++++||.|+ |++|.+.++.+...|++|+++++++++++.+.+++ +.+. ..|-.+.+.+.++ .+.+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999986 99999999999999999999999887776554433 3321 2354554443332 2468
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++++.|.
T Consensus 85 d~li~nAg~ 93 (275)
T PRK05876 85 DVVFSNAGI 93 (275)
T ss_pred CEEEECCCc
Confidence 999998873
No 266
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.014 Score=51.40 Aligned_cols=75 Identities=25% Similarity=0.325 Sum_probs=53.6
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GADA---FLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 248 (359)
.++++||.|+ |++|...+..+...|++|+++++++++.+.+.+++ +.+. ..|..+.+.+.++ .+.+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999986 99999999999999999999999988776654433 3221 2344454433332 2479
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++.++|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999998874
No 267
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.015 Score=51.33 Aligned_cols=75 Identities=28% Similarity=0.364 Sum_probs=53.6
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CC-c--EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GA-D--AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~-~--~v~~~~~~~~~~~~-------~~~~ 248 (359)
.+++++|.|+ |.+|..++..+...|++|+++++++++.+.+...+ +. . ...|..+.+.+.++ .+.+
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTI 87 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999986 99999999999999999999999988876653332 21 1 22344444333332 2478
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++.+.|.
T Consensus 88 d~li~~ag~ 96 (258)
T PRK06949 88 DILVNNSGV 96 (258)
T ss_pred CEEEECCCC
Confidence 999999884
No 268
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.019 Score=50.66 Aligned_cols=74 Identities=15% Similarity=0.139 Sum_probs=53.4
Q ss_pred CCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCc---EEecCCCHHHHHHhcC-CccEEEECC
Q 018246 184 GKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS---KLGAD---AFLVSSDPAKVKAAMG-TMDYIIDTV 255 (359)
Q Consensus 184 g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~~~-~~d~vid~~ 255 (359)
+.++||.|+ |.+|..+++.+...|++|+++++++++.+.+.+ ..+.. ...|..+.+.+..... ++|++|.+.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 357999986 999999999999999999999998776554422 22321 2235555555555444 899999998
Q ss_pred CC
Q 018246 256 SA 257 (359)
Q Consensus 256 g~ 257 (359)
|.
T Consensus 82 g~ 83 (257)
T PRK09291 82 GI 83 (257)
T ss_pred Cc
Confidence 73
No 269
>PRK06141 ornithine cyclodeaminase; Validated
Probab=96.55 E-value=0.033 Score=50.93 Aligned_cols=98 Identities=23% Similarity=0.214 Sum_probs=65.5
Q ss_pred hcCCCCCCCEEEEECCchHHHHHHHHHH-HCCC-eEEEEeCChhhHHHHHHHcC---CcEEecCCCHHHHHHhcCCccEE
Q 018246 177 YYGMTEPGKHLGVAGLGGLGHVAVKIGK-AFGL-KVTVISTSPKKESEAISKLG---ADAFLVSSDPAKVKAAMGTMDYI 251 (359)
Q Consensus 177 ~~~~~~~g~~VlI~G~g~vG~~a~~la~-~~g~-~V~~v~~~~~~~~~~~~~~g---~~~v~~~~~~~~~~~~~~~~d~v 251 (359)
...+ ....+|+|+|+|..|.+.+.... ..+. +|++.+|++++.+.+.+++. .. +....+ ..+...+.|+|
T Consensus 119 ~La~-~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~~~---~~~av~~aDIV 193 (314)
T PRK06141 119 YLAR-KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVVTD---LEAAVRQADII 193 (314)
T ss_pred HhCC-CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEeCC---HHHHHhcCCEE
Confidence 3444 56788999999999999886444 3565 89999999999887766653 22 111122 23344689999
Q ss_pred EECCCChh-hHHHHHhccccCCEEEEecCCC
Q 018246 252 IDTVSAVH-SLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 252 id~~g~~~-~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+.++++.. .+.. +.++++-.+..+|...
T Consensus 194 i~aT~s~~pvl~~--~~l~~g~~i~~ig~~~ 222 (314)
T PRK06141 194 SCATLSTEPLVRG--EWLKPGTHLDLVGNFT 222 (314)
T ss_pred EEeeCCCCCEecH--HHcCCCCEEEeeCCCC
Confidence 98887653 1222 5678887666666543
No 270
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.55 E-value=0.019 Score=51.65 Aligned_cols=96 Identities=16% Similarity=0.173 Sum_probs=73.0
Q ss_pred ccccchhhhhhhHhHhcCCCCCCCEEEEEC-CchHHHHHHHHHHHCCCeEEEEe-CChhhHHHHHHHcCCcEEecCCCHH
Q 018246 162 APLLCAGITVYSPMKYYGMTEPGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVIS-TSPKKESEAISKLGADAFLVSSDPA 239 (359)
Q Consensus 162 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~G-~g~vG~~a~~la~~~g~~V~~v~-~~~~~~~~~~~~~g~~~v~~~~~~~ 239 (359)
..+||+..+.+..++...---.|++|+|+| .+.+|.-.+.++...|+.|++.. ++.+
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~--------------------- 194 (296)
T PRK14188 136 ALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD--------------------- 194 (296)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC---------------------
Confidence 356777666666676655435899999999 69999999999999999999984 4421
Q ss_pred HHHHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCC
Q 018246 240 KVKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 240 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+.+.....|+|+-++|.+..+...+ +++|..++++|...
T Consensus 195 -l~e~~~~ADIVIsavg~~~~v~~~~--lk~GavVIDvGin~ 233 (296)
T PRK14188 195 -LPAVCRRADILVAAVGRPEMVKGDW--IKPGATVIDVGINR 233 (296)
T ss_pred -HHHHHhcCCEEEEecCChhhcchhe--ecCCCEEEEcCCcc
Confidence 1233346799999999988566544 89999999998753
No 271
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.038 Score=48.27 Aligned_cols=72 Identities=15% Similarity=0.059 Sum_probs=49.6
Q ss_pred CEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-Cc-EEecCCCHHHHHHhc----CCccEEEECCC
Q 018246 185 KHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLG-AD-AFLVSSDPAKVKAAM----GTMDYIIDTVS 256 (359)
Q Consensus 185 ~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g-~~-~v~~~~~~~~~~~~~----~~~d~vid~~g 256 (359)
.+++|.|+ |++|...+..+...|++|+++++++++.+.+.+... .. ...|-.+.+.+.++. ...|.++.+.|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag 80 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG 80 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence 46889886 999999888888889999999999888777633322 21 234555555444433 24677776665
No 272
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.014 Score=53.44 Aligned_cols=75 Identities=25% Similarity=0.242 Sum_probs=53.5
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----C-Cc---EEecCCCHHHHHHh-------cC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL----G-AD---AFLVSSDPAKVKAA-------MG 246 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~----g-~~---~v~~~~~~~~~~~~-------~~ 246 (359)
.|++++|.|+ +++|.+++..+...|++|++++|++++.+.+.+++ + .. ..+|-.+.+.+.++ .+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4688999986 99999999988889999999999988766554432 1 11 12355554443332 24
Q ss_pred CccEEEECCCC
Q 018246 247 TMDYIIDTVSA 257 (359)
Q Consensus 247 ~~d~vid~~g~ 257 (359)
.+|++++++|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 78999998873
No 273
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.016 Score=51.10 Aligned_cols=75 Identities=19% Similarity=0.303 Sum_probs=53.6
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GAD---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
++.+++|.|+ |++|...+..+...|++|+++++++++.+.+.+++ +.. ...|..+.+.+..+ .+.+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 5678999986 99999999999999999999999987766554433 321 23344544433322 2478
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++.+.|.
T Consensus 84 d~vi~~ag~ 92 (258)
T PRK07890 84 DALVNNAFR 92 (258)
T ss_pred cEEEECCcc
Confidence 999998874
No 274
>PRK07574 formate dehydrogenase; Provisional
Probab=96.52 E-value=0.021 Score=53.44 Aligned_cols=90 Identities=19% Similarity=0.254 Sum_probs=65.4
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChh---
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVH--- 259 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 259 (359)
.|.+|.|+|.|.+|+..++.++.+|.+|++.+++....+.. +.+|.... . .+.++....|+|+.+.....
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~-~~~g~~~~---~---~l~ell~~aDvV~l~lPlt~~T~ 263 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVE-QELGLTYH---V---SFDSLVSVCDVVTIHCPLHPETE 263 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCchhhH-hhcCceec---C---CHHHHhhcCCEEEEcCCCCHHHH
Confidence 57899999999999999999999999999999876333322 34554321 1 24455667899988776332
Q ss_pred -hH-HHHHhccccCCEEEEecC
Q 018246 260 -SL-APLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 260 -~~-~~~~~~l~~~G~~v~~g~ 279 (359)
.+ ...+..|+++..+|.++-
T Consensus 264 ~li~~~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 264 HLFDADVLSRMKRGSYLVNTAR 285 (385)
T ss_pred HHhCHHHHhcCCCCcEEEECCC
Confidence 12 357888999998888863
No 275
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.034 Score=49.75 Aligned_cols=95 Identities=22% Similarity=0.257 Sum_probs=61.4
Q ss_pred CEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHHh------cCCccEEE
Q 018246 185 KHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GAD---AFLVSSDPAKVKAA------MGTMDYII 252 (359)
Q Consensus 185 ~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~------~~~~d~vi 252 (359)
++++|.|+|++|..++..+. .|++|+++++++++.+.+.+++ |.+ ...|-.+.+.+..+ .+++|+++
T Consensus 3 k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~li 81 (275)
T PRK06940 3 EVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGLV 81 (275)
T ss_pred CEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEEE
Confidence 57888899999999988885 7999999999887665543332 322 12355554333222 14799999
Q ss_pred ECCCChh------------------hHHHHHhccccCCEEEEecCC
Q 018246 253 DTVSAVH------------------SLAPLLGLLKVNGKLVTVGLP 280 (359)
Q Consensus 253 d~~g~~~------------------~~~~~~~~l~~~G~~v~~g~~ 280 (359)
+++|... .++.+...+..+|+++.++..
T Consensus 82 ~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~ 127 (275)
T PRK06940 82 HTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ 127 (275)
T ss_pred ECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence 9998421 123344455666777776543
No 276
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.51 E-value=0.024 Score=48.85 Aligned_cols=96 Identities=26% Similarity=0.305 Sum_probs=62.3
Q ss_pred CCCCCCEEEEECCchHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHH---HcCCcE--EecCCCHHHHHHhcCCccEEE
Q 018246 180 MTEPGKHLGVAGLGGLGHVAVKIGKAFGL--KVTVISTSPKKESEAIS---KLGADA--FLVSSDPAKVKAAMGTMDYII 252 (359)
Q Consensus 180 ~~~~g~~VlI~G~g~vG~~a~~la~~~g~--~V~~v~~~~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~~~~~d~vi 252 (359)
.++++++||-+|+|. |..++.+++..+. +|+.++.+++..+.+.+ +.|.+. ++..+..+.. .....||+++
T Consensus 74 ~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~-~~~~~fD~Ii 151 (215)
T TIGR00080 74 ELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGW-EPLAPYDRIY 151 (215)
T ss_pred CCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCC-cccCCCCEEE
Confidence 358999999998764 5566677776653 79999999887766633 344322 2211111110 1123799998
Q ss_pred ECCCChhhHHHHHhccccCCEEEEe
Q 018246 253 DTVSAVHSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 253 d~~g~~~~~~~~~~~l~~~G~~v~~ 277 (359)
-............+.|+++|+++..
T Consensus 152 ~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 152 VTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred EcCCcccccHHHHHhcCcCcEEEEE
Confidence 6655555467888999999998865
No 277
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.50 E-value=0.059 Score=47.72 Aligned_cols=99 Identities=16% Similarity=0.190 Sum_probs=64.0
Q ss_pred CCCEEEEECC---chHHHHHHHHHHHCCCeEEEEeCC---hhhHHHHHHHc-CCc---EEecCCCHHHHHHh-------c
Q 018246 183 PGKHLGVAGL---GGLGHVAVKIGKAFGLKVTVISTS---PKKESEAISKL-GAD---AFLVSSDPAKVKAA-------M 245 (359)
Q Consensus 183 ~g~~VlI~G~---g~vG~~a~~la~~~g~~V~~v~~~---~~~~~~~~~~~-g~~---~v~~~~~~~~~~~~-------~ 245 (359)
.|++++|.|+ +++|.++++.+...|++|++++++ +++++.+.+++ +.. ...|-.+.+.+..+ .
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 4688999986 599999999988899999998754 34455554444 221 12355554333222 2
Q ss_pred CCccEEEECCCCh-------h----------------------hHHHHHhccccCCEEEEecCCC
Q 018246 246 GTMDYIIDTVSAV-------H----------------------SLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 246 ~~~d~vid~~g~~-------~----------------------~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+.+|++++++|.. . ....++..|+++|+++.++...
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~ 150 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLG 150 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccC
Confidence 4799999987631 0 0123455667789999887644
No 278
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.50 E-value=0.018 Score=51.07 Aligned_cols=76 Identities=20% Similarity=0.284 Sum_probs=54.2
Q ss_pred CCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHH---HHcC-C-cEEecCCCHHHHHHh-------cCCc
Q 018246 182 EPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAI---SKLG-A-DAFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 182 ~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~---~~~g-~-~~v~~~~~~~~~~~~-------~~~~ 248 (359)
-.|+.|||.|+ +++|++.++=...+|+++++.+.+.+..++.. ++.| + .++.|-++.+.+.+. .+.+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V 115 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV 115 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence 37899999986 89999877777778999999997776544432 3334 2 456676665444333 3589
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|++++++|-
T Consensus 116 ~ILVNNAGI 124 (300)
T KOG1201|consen 116 DILVNNAGI 124 (300)
T ss_pred eEEEecccc
Confidence 999999884
No 279
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.50 E-value=0.014 Score=53.50 Aligned_cols=74 Identities=20% Similarity=0.254 Sum_probs=53.5
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC---c-E--EecCCCHHHHHHhc-------CCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGA---D-A--FLVSSDPAKVKAAM-------GTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~---~-~--v~~~~~~~~~~~~~-------~~~ 248 (359)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+++.. . . ..|-.+.+.+.++. +.+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 4678999986 9999999998888999999999998887666555431 1 1 23445544333322 369
Q ss_pred cEEEECCC
Q 018246 249 DYIIDTVS 256 (359)
Q Consensus 249 d~vid~~g 256 (359)
|++|+++|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999987
No 280
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.49 E-value=0.014 Score=51.17 Aligned_cols=75 Identities=24% Similarity=0.313 Sum_probs=53.9
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC--C---cEEecCCCHHHHHHh-------cCCcc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLG--A---DAFLVSSDPAKVKAA-------MGTMD 249 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g--~---~~v~~~~~~~~~~~~-------~~~~d 249 (359)
.+.++||.|+ |.+|..+++.+...|++|+++++++++.+.+...+. . ....|..+.+.+..+ .+.+|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4578999986 999999999988899999999999887766544433 1 122344554444332 24789
Q ss_pred EEEECCCC
Q 018246 250 YIIDTVSA 257 (359)
Q Consensus 250 ~vid~~g~ 257 (359)
++|.+.|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99998875
No 281
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.02 Score=49.56 Aligned_cols=71 Identities=25% Similarity=0.294 Sum_probs=52.5
Q ss_pred EEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHhc----CCccEEEECCC
Q 018246 186 HLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAF-LVSSDPAKVKAAM----GTMDYIIDTVS 256 (359)
Q Consensus 186 ~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~----~~~d~vid~~g 256 (359)
+++|.|+ |++|...++.+...|++|+++++++++.+.+.++.+...+ .|..+.+.+..+. +.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 4788876 9999999999988999999999998887776555554432 4555554444332 36899998865
No 282
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.46 E-value=0.026 Score=50.41 Aligned_cols=75 Identities=20% Similarity=0.227 Sum_probs=51.2
Q ss_pred CCCEEEEECCc---hHHHHHHHHHHHCCCeEEEEeCChhh---HHHHHHHcCCcE--EecCCCHHHHHHh-------cCC
Q 018246 183 PGKHLGVAGLG---GLGHVAVKIGKAFGLKVTVISTSPKK---ESEAISKLGADA--FLVSSDPAKVKAA-------MGT 247 (359)
Q Consensus 183 ~g~~VlI~G~g---~vG~~a~~la~~~g~~V~~v~~~~~~---~~~~~~~~g~~~--v~~~~~~~~~~~~-------~~~ 247 (359)
.++++||.|++ ++|.++++.+...|++|++++++++. .+.+.++.|... ..|-.+.+.+..+ .+.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 46889999874 89999999999999999999877532 233333445332 2355554433332 247
Q ss_pred ccEEEECCCC
Q 018246 248 MDYIIDTVSA 257 (359)
Q Consensus 248 ~d~vid~~g~ 257 (359)
+|++++++|.
T Consensus 86 iD~lVnnAG~ 95 (271)
T PRK06505 86 LDFVVHAIGF 95 (271)
T ss_pred CCEEEECCcc
Confidence 9999999873
No 283
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.46 E-value=0.028 Score=50.08 Aligned_cols=95 Identities=18% Similarity=0.205 Sum_probs=73.2
Q ss_pred cccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 018246 163 PLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKV 241 (359)
Q Consensus 163 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 241 (359)
..||+..+.+..++...---.|++++|+|- ..+|.-.+.++...|+.|++..+.... +
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~---------------------l 196 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKN---------------------L 196 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCC---------------------H
Confidence 467777777777777654357999999996 569999999999999999998754221 3
Q ss_pred HHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCC
Q 018246 242 KAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLP 280 (359)
Q Consensus 242 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (359)
++.....|+++.++|.+..+.. ..++++..++++|..
T Consensus 197 ~~~~~~ADIvi~avG~p~~v~~--~~vk~gavVIDvGin 233 (285)
T PRK10792 197 RHHVRNADLLVVAVGKPGFIPG--EWIKPGAIVIDVGIN 233 (285)
T ss_pred HHHHhhCCEEEEcCCCcccccH--HHcCCCcEEEEcccc
Confidence 3444578999999998884443 788999999999854
No 284
>PLN03139 formate dehydrogenase; Provisional
Probab=96.46 E-value=0.016 Score=54.17 Aligned_cols=90 Identities=16% Similarity=0.193 Sum_probs=65.5
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChh---
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVH--- 259 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 259 (359)
.|++|.|+|.|.+|...++.++.+|.+|++.+++....+.. ++.|+..+ +.+.++....|+|+.+.....
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~-~~~g~~~~------~~l~ell~~sDvV~l~lPlt~~T~ 270 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPELE-KETGAKFE------EDLDAMLPKCDVVVINTPLTEKTR 270 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchhhH-hhcCceec------CCHHHHHhhCCEEEEeCCCCHHHH
Confidence 68899999999999999999999999999999875433333 45554321 124455567899988776322
Q ss_pred -hH-HHHHhccccCCEEEEecC
Q 018246 260 -SL-APLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 260 -~~-~~~~~~l~~~G~~v~~g~ 279 (359)
.+ ...+..|+++..+|.++-
T Consensus 271 ~li~~~~l~~mk~ga~lIN~aR 292 (386)
T PLN03139 271 GMFNKERIAKMKKGVLIVNNAR 292 (386)
T ss_pred HHhCHHHHhhCCCCeEEEECCC
Confidence 12 357888999998888863
No 285
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.46 E-value=0.036 Score=46.51 Aligned_cols=94 Identities=21% Similarity=0.265 Sum_probs=59.4
Q ss_pred CCCCCEEEEECCchHHHHHHHHHHHC-CCeEEEEeCChhhHHHHH---HHcCCcEE--ecCCCHHHHHHhcCCccEEEEC
Q 018246 181 TEPGKHLGVAGLGGLGHVAVKIGKAF-GLKVTVISTSPKKESEAI---SKLGADAF--LVSSDPAKVKAAMGTMDYIIDT 254 (359)
Q Consensus 181 ~~~g~~VlI~G~g~vG~~a~~la~~~-g~~V~~v~~~~~~~~~~~---~~~g~~~v--~~~~~~~~~~~~~~~~d~vid~ 254 (359)
+.++.+||-+|+|. |..+..+++.. +.+|+.++.+++..+.+. ++.+.+.+ +..+ ...... .+.+|+|+..
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d-~~~~~~-~~~fDlV~~~ 119 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGR-AEEFGQ-EEKFDVVTSR 119 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEecc-HhhCCC-CCCccEEEEc
Confidence 45688999988753 44455555544 569999999988665552 34454322 2111 111111 3479999864
Q ss_pred CCC--hhhHHHHHhccccCCEEEEe
Q 018246 255 VSA--VHSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 255 ~g~--~~~~~~~~~~l~~~G~~v~~ 277 (359)
... ...+..+.+.|+++|+++.+
T Consensus 120 ~~~~~~~~l~~~~~~LkpGG~lv~~ 144 (187)
T PRK00107 120 AVASLSDLVELCLPLLKPGGRFLAL 144 (187)
T ss_pred cccCHHHHHHHHHHhcCCCeEEEEE
Confidence 332 23567889999999999987
No 286
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.46 E-value=0.015 Score=52.96 Aligned_cols=88 Identities=19% Similarity=0.285 Sum_probs=64.9
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChh---
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVH--- 259 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 259 (359)
.|++|.|+|.|.+|...++.++.+|.+|++.++..++.. +..... ..+.+.++....|+|+.+.....
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~---~~~~l~e~l~~aDvvv~~lPlt~~T~ 205 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA---GREELSAFLSQTRVLINLLPNTPETV 205 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec---ccccHHHHHhcCCEEEECCCCCHHHH
Confidence 678999999999999999999999999999987654321 222221 12345566678899998887433
Q ss_pred -hH-HHHHhccccCCEEEEecC
Q 018246 260 -SL-APLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 260 -~~-~~~~~~l~~~G~~v~~g~ 279 (359)
.+ ...+..|+++..+|.+|-
T Consensus 206 ~li~~~~l~~mk~ga~lIN~aR 227 (312)
T PRK15469 206 GIINQQLLEQLPDGAYLLNLAR 227 (312)
T ss_pred HHhHHHHHhcCCCCcEEEECCC
Confidence 12 357889999999999864
No 287
>PLN02253 xanthoxin dehydrogenase
Probab=96.46 E-value=0.023 Score=50.85 Aligned_cols=75 Identities=23% Similarity=0.323 Sum_probs=53.4
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--c---EEecCCCHHHHHHh-------cCCcc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGA--D---AFLVSSDPAKVKAA-------MGTMD 249 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~--~---~v~~~~~~~~~~~~-------~~~~d 249 (359)
.++++||.|+ |++|.+.++.+...|++|++++++++..+.+.++++. . ...|-.+.+.+..+ .+++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 4678999986 9999999998888999999999887766555444432 1 12355555444332 24799
Q ss_pred EEEECCCC
Q 018246 250 YIIDTVSA 257 (359)
Q Consensus 250 ~vid~~g~ 257 (359)
++++++|.
T Consensus 97 ~li~~Ag~ 104 (280)
T PLN02253 97 IMVNNAGL 104 (280)
T ss_pred EEEECCCc
Confidence 99998874
No 288
>PRK09242 tropinone reductase; Provisional
Probab=96.41 E-value=0.024 Score=50.02 Aligned_cols=75 Identities=15% Similarity=0.232 Sum_probs=53.7
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-----CCc---EEecCCCHHHHHHh-------cC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL-----GAD---AFLVSSDPAKVKAA-------MG 246 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~-----g~~---~v~~~~~~~~~~~~-------~~ 246 (359)
.++++||.|+ |++|...+..+...|++|+++++++++.+.+.+++ +.+ ...|..+.+.+.++ .+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4788999986 99999999999999999999999988766554332 221 12344444333222 24
Q ss_pred CccEEEECCCC
Q 018246 247 TMDYIIDTVSA 257 (359)
Q Consensus 247 ~~d~vid~~g~ 257 (359)
++|+++.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 79999999985
No 289
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.41 E-value=0.027 Score=48.01 Aligned_cols=77 Identities=19% Similarity=0.340 Sum_probs=50.7
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChh-------------------hHHHH---HHHcCCc-EE--ec-C
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPK-------------------KESEA---ISKLGAD-AF--LV-S 235 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~-------------------~~~~~---~~~~g~~-~v--~~-~ 235 (359)
.+.+|+|+|+|++|..+++.+...|. ++++++.+.- |.+.+ ++++... .+ ++ .
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~ 99 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER 99 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence 45789999999999999999999998 8999986621 11111 1233321 11 11 1
Q ss_pred CCHHHHHHhcCCccEEEECCCChh
Q 018246 236 SDPAKVKAAMGTMDYIIDTVSAVH 259 (359)
Q Consensus 236 ~~~~~~~~~~~~~d~vid~~g~~~ 259 (359)
-+.+.+.++..++|+|++|.++..
T Consensus 100 i~~~~~~~~~~~~D~Vi~~~d~~~ 123 (202)
T TIGR02356 100 VTAENLELLINNVDLVLDCTDNFA 123 (202)
T ss_pred CCHHHHHHHHhCCCEEEECCCCHH
Confidence 112334455568999999998876
No 290
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.40 E-value=0.095 Score=40.02 Aligned_cols=90 Identities=20% Similarity=0.279 Sum_probs=63.3
Q ss_pred EEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHhc-CCccEEEECCCChh---hH
Q 018246 187 LGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFL-VSSDPAKVKAAM-GTMDYIIDTVSAVH---SL 261 (359)
Q Consensus 187 VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~-~~~d~vid~~g~~~---~~ 261 (359)
|+|+|.|.+|...++.++..+.+|++++.++++.+.+ ++.|...+. |..+.+.+.++. ..++.++-+.+... .+
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~-~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~~~ 79 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEEL-REEGVEVIYGDATDPEVLERAGIEKADAVVILTDDDEENLLI 79 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHH-HHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSSHHHHHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHH-HhcccccccccchhhhHHhhcCccccCEEEEccCCHHHHHHH
Confidence 6788999999999999999777999999999998888 666755433 334455555553 48999988887664 12
Q ss_pred HHHHhccccCCEEEEe
Q 018246 262 APLLGLLKVNGKLVTV 277 (359)
Q Consensus 262 ~~~~~~l~~~G~~v~~ 277 (359)
....+.+.+..+++..
T Consensus 80 ~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 80 ALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHTTTSEEEEE
T ss_pred HHHHHHHCCCCeEEEE
Confidence 2344455566666654
No 291
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.39 E-value=0.027 Score=46.21 Aligned_cols=89 Identities=24% Similarity=0.334 Sum_probs=59.7
Q ss_pred EEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhhHHH--
Q 018246 186 HLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAP-- 263 (359)
Q Consensus 186 ~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~-- 263 (359)
+|-++|.|.+|...+.-+...|.+|++.++++++.+.+ .+.|+... .+ ..++....|+|+-|+........
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~-~~~g~~~~--~s----~~e~~~~~dvvi~~v~~~~~v~~v~ 75 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEAL-AEAGAEVA--DS----PAEAAEQADVVILCVPDDDAVEAVL 75 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHH-HHTTEEEE--SS----HHHHHHHBSEEEE-SSSHHHHHHHH
T ss_pred EEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhh-HHhhhhhh--hh----hhhHhhcccceEeecccchhhhhhh
Confidence 68899999999999999999999999999999999888 45564433 12 22233346999999988554444
Q ss_pred ----HHhccccCCEEEEecCCC
Q 018246 264 ----LLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 264 ----~~~~l~~~G~~v~~g~~~ 281 (359)
+...+.++..+++++...
T Consensus 76 ~~~~i~~~l~~g~iiid~sT~~ 97 (163)
T PF03446_consen 76 FGENILAGLRPGKIIIDMSTIS 97 (163)
T ss_dssp HCTTHGGGS-TTEEEEE-SS--
T ss_pred hhhHHhhccccceEEEecCCcc
Confidence 344566677777775543
No 292
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.027 Score=48.92 Aligned_cols=74 Identities=8% Similarity=0.089 Sum_probs=53.0
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCc---EEecCCCHHHHHHh-------cC-C
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS---KLGAD---AFLVSSDPAKVKAA-------MG-T 247 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~-------~~-~ 247 (359)
.|++++|.|+ +++|++.+..+...|++|+++++++++++.+.+ +.+.+ ...|..+.+.+.++ .+ .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999986 899999999998999999999999988766533 33432 22344444433322 24 6
Q ss_pred ccEEEECCC
Q 018246 248 MDYIIDTVS 256 (359)
Q Consensus 248 ~d~vid~~g 256 (359)
+|+++++.|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999986
No 293
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.38 E-value=0.031 Score=48.01 Aligned_cols=99 Identities=19% Similarity=0.322 Sum_probs=61.3
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCCh------hhHHHH----------------HHHcCCc-EEe---cC
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSP------KKESEA----------------ISKLGAD-AFL---VS 235 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~------~~~~~~----------------~~~~g~~-~v~---~~ 235 (359)
+.++|+|+|.|++|.+++..+...|. ++.+++..+ .|.-.+ +++.+.. +|- +.
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 45789999999999999999999999 888888443 221111 1122211 111 11
Q ss_pred CCHHHHHHhcC-CccEEEECCCChhh-HHHHHhccccCCEEEEecCCC
Q 018246 236 SDPAKVKAAMG-TMDYIIDTVSAVHS-LAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 236 ~~~~~~~~~~~-~~d~vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~~ 281 (359)
-.++.+.++.. ++|+|+||..+-.+ ...+..|.+.+=.++..++..
T Consensus 109 ~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag 156 (263)
T COG1179 109 ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAG 156 (263)
T ss_pred hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeecccc
Confidence 11244555544 89999999997552 233344566666777776544
No 294
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.024 Score=50.07 Aligned_cols=74 Identities=15% Similarity=0.169 Sum_probs=53.0
Q ss_pred CCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC----c-EEecCCCHHHHHHh-------cCCccE
Q 018246 184 GKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGA----D-AFLVSSDPAKVKAA-------MGTMDY 250 (359)
Q Consensus 184 g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~----~-~v~~~~~~~~~~~~-------~~~~d~ 250 (359)
+.+|||.|+ |++|...+..+...|++|+++++++++.+.+.+++.. . ...|..+.+.+.++ .+.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 357999986 9999999999988999999999998887766454431 1 22355554443332 235899
Q ss_pred EEECCCC
Q 018246 251 IIDTVSA 257 (359)
Q Consensus 251 vid~~g~ 257 (359)
++.++|.
T Consensus 82 lv~~ag~ 88 (257)
T PRK07024 82 VIANAGI 88 (257)
T ss_pred EEECCCc
Confidence 9998873
No 295
>PRK08291 ectoine utilization protein EutC; Validated
Probab=96.36 E-value=0.033 Score=51.33 Aligned_cols=94 Identities=20% Similarity=0.240 Sum_probs=64.2
Q ss_pred CCCCEEEEECCchHHHHHHHHHHH-CCC-eEEEEeCChhhHHHHHHHc----CCcEEecCCCHHHHHHhcCCccEEEECC
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKA-FGL-KVTVISTSPKKESEAISKL----GADAFLVSSDPAKVKAAMGTMDYIIDTV 255 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~-~g~-~V~~v~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~d~vid~~ 255 (359)
+...+++|+|+|..|.+.+..+.. .+. +|.+.++++++.+.+.+++ |.. +....+ +.+.....|+|+.++
T Consensus 130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~~d---~~~al~~aDiVi~aT 205 (330)
T PRK08291 130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVARD---VHEAVAGADIIVTTT 205 (330)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEeCC---HHHHHccCCEEEEee
Confidence 445789999999999987776664 565 8999999999988776654 332 221222 234445789999988
Q ss_pred CChh-hHHHHHhccccCCEEEEecCCC
Q 018246 256 SAVH-SLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 256 g~~~-~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+... .+.. ..++++-.+..+|...
T Consensus 206 ~s~~p~i~~--~~l~~g~~v~~vg~d~ 230 (330)
T PRK08291 206 PSEEPILKA--EWLHPGLHVTAMGSDA 230 (330)
T ss_pred CCCCcEecH--HHcCCCceEEeeCCCC
Confidence 7654 2333 3467877887777643
No 296
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=96.36 E-value=0.067 Score=45.69 Aligned_cols=118 Identities=16% Similarity=0.043 Sum_probs=76.1
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCCh-hhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhhH
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSP-KKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSL 261 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 261 (359)
.|..|||.|+|.+|..=+.+....|++|+++...- ++...+.++.+...+- ..+......++++|+-+++.+..-
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~----~~~~~~~~~~~~lviaAt~d~~ln 86 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIE----REFDAEDLDDAFLVIAATDDEELN 86 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhh----cccChhhhcCceEEEEeCCCHHHH
Confidence 67899999999999999999999999999998776 4454443433322221 111111122499999999998834
Q ss_pred HHHHhccccCCEEEEecCCCCCeeeCHHHHH-hcCcEEEEeecC
Q 018246 262 APLLGLLKVNGKLVTVGLPEKPLEVPIFALV-GARRLVGGSNVG 304 (359)
Q Consensus 262 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~k~~~i~g~~~~ 304 (359)
+...+..+..+.++.+........+.+...+ ...+++.-+..+
T Consensus 87 ~~i~~~a~~~~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIsT~G 130 (210)
T COG1648 87 ERIAKAARERRILVNVVDDPELCDFIFPAIVDRGPLQIAISTGG 130 (210)
T ss_pred HHHHHHHHHhCCceeccCCcccCceecceeeccCCeEEEEECCC
Confidence 5666677777998888766543333332222 234555444443
No 297
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.026 Score=49.71 Aligned_cols=74 Identities=27% Similarity=0.384 Sum_probs=51.8
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC----cEEecCCCHHHHHHh-------cCCccE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGA----DAFLVSSDPAKVKAA-------MGTMDY 250 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~~-------~~~~d~ 250 (359)
.++++||.|+ |.+|...++.+...|++|++++++++..+.. .+... ....|..+.+.+..+ .+++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVA-AQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4679999986 9999999999988999999999987654433 33321 122344554433332 247899
Q ss_pred EEECCCC
Q 018246 251 IIDTVSA 257 (359)
Q Consensus 251 vid~~g~ 257 (359)
++.++|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999874
No 298
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.022 Score=50.14 Aligned_cols=74 Identities=20% Similarity=0.297 Sum_probs=52.1
Q ss_pred CCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc-EE--ecCCCHHHHHHh-------cCCcc
Q 018246 184 GKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GAD-AF--LVSSDPAKVKAA-------MGTMD 249 (359)
Q Consensus 184 g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~-------~~~~d 249 (359)
|+++||.|+ |++|...++.+...|++|+++++++++.+.+.+++ +.. .. .|-.+.+.+.++ .+.+|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 468999986 99999999999999999999999987766553332 322 12 244454433332 24789
Q ss_pred EEEECCCC
Q 018246 250 YIIDTVSA 257 (359)
Q Consensus 250 ~vid~~g~ 257 (359)
+++++.|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99998873
No 299
>PRK08589 short chain dehydrogenase; Validated
Probab=96.34 E-value=0.028 Score=50.21 Aligned_cols=74 Identities=22% Similarity=0.318 Sum_probs=51.3
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GAD---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
.++++||.|+ +++|...++.+...|++|++++++ ++.+...+++ +.+ ...|..+.+.+..+ .+.+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 5778999986 999999999888899999999998 5544443333 321 22454554333322 2478
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++++.|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999998874
No 300
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.34 E-value=0.042 Score=49.01 Aligned_cols=97 Identities=16% Similarity=0.187 Sum_probs=72.8
Q ss_pred ccccchhhhhhhHhHhcCCCCCCCEEEEECCc-hHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 018246 162 APLLCAGITVYSPMKYYGMTEPGKHLGVAGLG-GLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK 240 (359)
Q Consensus 162 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g-~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (359)
..+||+..+.+..++...---.|++|+|+|.| .+|.-.+.++...|+.|++..+....
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~--------------------- 193 (285)
T PRK14191 135 GFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKD--------------------- 193 (285)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHH---------------------
Confidence 35677777767777666543579999999975 99999999999999999887543211
Q ss_pred HHHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCC
Q 018246 241 VKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 241 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+.+.....|+|+-++|.+..+. -..+++|..++++|...
T Consensus 194 l~~~~~~ADIvV~AvG~p~~i~--~~~vk~GavVIDvGi~~ 232 (285)
T PRK14191 194 LSFYTQNADIVCVGVGKPDLIK--ASMVKKGAVVVDIGINR 232 (285)
T ss_pred HHHHHHhCCEEEEecCCCCcCC--HHHcCCCcEEEEeeccc
Confidence 2334456899999999988443 35679999999998743
No 301
>PRK08643 acetoin reductase; Validated
Probab=96.33 E-value=0.027 Score=49.68 Aligned_cols=74 Identities=26% Similarity=0.338 Sum_probs=52.1
Q ss_pred CCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHHh-------cCCcc
Q 018246 184 GKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GAD---AFLVSSDPAKVKAA-------MGTMD 249 (359)
Q Consensus 184 g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~~~d 249 (359)
++++||.|+ |.+|...++.+...|++|+++++++++.+.+..++ +.+ ...|..+.+.+.++ .+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 568899986 99999999999999999999999887765553332 322 12345554433322 24789
Q ss_pred EEEECCCC
Q 018246 250 YIIDTVSA 257 (359)
Q Consensus 250 ~vid~~g~ 257 (359)
+++.+.|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999864
No 302
>PLN02928 oxidoreductase family protein
Probab=96.33 E-value=0.022 Score=52.79 Aligned_cols=95 Identities=21% Similarity=0.266 Sum_probs=64.6
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-----CcEEec-CCCHHHHHHhcCCccEEEECCC
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLG-----ADAFLV-SSDPAKVKAAMGTMDYIIDTVS 256 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g-----~~~v~~-~~~~~~~~~~~~~~d~vid~~g 256 (359)
.|++|.|+|.|.+|..+++.++.+|++|++.+++..+... ..++ ...+.+ ......+.++....|+|+.+..
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~lP 235 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPE--DGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCCT 235 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhh--hhhccccccccccccccCcccCHHHHHhhCCEEEECCC
Confidence 6889999999999999999999999999999986432111 1111 001110 0112235566667899998876
Q ss_pred Chh----hH-HHHHhccccCCEEEEecC
Q 018246 257 AVH----SL-APLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 257 ~~~----~~-~~~~~~l~~~G~~v~~g~ 279 (359)
... .+ ...+..|+++..+|.++-
T Consensus 236 lt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 236 LTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred CChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 322 12 478899999999999863
No 303
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.024 Score=50.14 Aligned_cols=75 Identities=24% Similarity=0.376 Sum_probs=53.6
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCc-E--EecCCCHHHHHHh---cCCccEE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL----GAD-A--FLVSSDPAKVKAA---MGTMDYI 251 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~----g~~-~--v~~~~~~~~~~~~---~~~~d~v 251 (359)
.++++||.|+ |++|...++.+...|++|+++++++++.+.+.+++ +.. . ..|-.+.+.+..+ .+.+|++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 4689999986 99999999998889999999999988766653332 322 1 2344444444333 2479999
Q ss_pred EECCCC
Q 018246 252 IDTVSA 257 (359)
Q Consensus 252 id~~g~ 257 (359)
+.+.|.
T Consensus 86 v~~ag~ 91 (259)
T PRK06125 86 VNNAGA 91 (259)
T ss_pred EECCCC
Confidence 998874
No 304
>PRK08017 oxidoreductase; Provisional
Probab=96.31 E-value=0.032 Score=49.07 Aligned_cols=72 Identities=21% Similarity=0.281 Sum_probs=53.0
Q ss_pred CEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHH----Hh---c-CCccEEEEC
Q 018246 185 KHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAF-LVSSDPAKVK----AA---M-GTMDYIIDT 254 (359)
Q Consensus 185 ~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~----~~---~-~~~d~vid~ 254 (359)
+++||.|+ |.+|..+++.+...|++|+++++++++.+.+ ++.+...+ .|..+.+.+. .. . +.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM-NSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH-HhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 47999987 9999999999999999999999999888777 56665433 3444443322 21 2 367888888
Q ss_pred CCC
Q 018246 255 VSA 257 (359)
Q Consensus 255 ~g~ 257 (359)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 764
No 305
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.31 E-value=0.1 Score=40.71 Aligned_cols=90 Identities=14% Similarity=0.345 Sum_probs=63.0
Q ss_pred EEEECC-chHHHHHHHHHHHCC--CeEEEEe--CChhhHHHHHHHcCCcEEecCCCH--HHHH-----------------
Q 018246 187 LGVAGL-GGLGHVAVKIGKAFG--LKVTVIS--TSPKKESEAISKLGADAFLVSSDP--AKVK----------------- 242 (359)
Q Consensus 187 VlI~G~-g~vG~~a~~la~~~g--~~V~~v~--~~~~~~~~~~~~~g~~~v~~~~~~--~~~~----------------- 242 (359)
|.|+|+ |.+|..+.++.++.. .+|+... ++-+.+...+++|....+.-.++. +.++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 578997 999999999999997 5777755 555667777788998877654432 1111
Q ss_pred ---Hhc--CCccEEEECCCChhhHHHHHhccccCCEEEE
Q 018246 243 ---AAM--GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVT 276 (359)
Q Consensus 243 ---~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~ 276 (359)
++. ..+|+|+.+..+...+...+..++.+-++.+
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL 119 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL 119 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence 222 2799999988877778889999988877654
No 306
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.30 E-value=0.042 Score=46.18 Aligned_cols=97 Identities=18% Similarity=0.204 Sum_probs=60.1
Q ss_pred hcCCCCCCCEEEEECCchHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHH---HHHhc--CCcc
Q 018246 177 YYGMTEPGKHLGVAGLGGLGHVAVKIGKAFG-LKVTVISTSPKKESEAISKLGADAF-LVSSDPAK---VKAAM--GTMD 249 (359)
Q Consensus 177 ~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g-~~V~~v~~~~~~~~~~~~~~g~~~v-~~~~~~~~---~~~~~--~~~d 249 (359)
+...+++|++||.+|+|.-++......+..+ .+|++++.++++ ...+...+ .|..+.+. +.+.. .++|
T Consensus 26 ~~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~-----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 26 KFKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK-----PIENVDFIRGDFTDEEVLNKIRERVGDDKVD 100 (188)
T ss_pred HhcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc-----cCCCceEEEeeCCChhHHHHHHHHhCCCCcc
Confidence 3455689999999998876654444444433 489999998764 11233322 23333222 22222 3699
Q ss_pred EEEECC-----CC------------hhhHHHHHhccccCCEEEEec
Q 018246 250 YIIDTV-----SA------------VHSLAPLLGLLKVNGKLVTVG 278 (359)
Q Consensus 250 ~vid~~-----g~------------~~~~~~~~~~l~~~G~~v~~g 278 (359)
+|+... |. ..++..+.+.|+++|+++...
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 999522 21 235778899999999998864
No 307
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.30 E-value=0.027 Score=49.76 Aligned_cols=75 Identities=19% Similarity=0.310 Sum_probs=54.2
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc---EEecCCCHHHHHHh-------cCCccEE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD---AFLVSSDPAKVKAA-------MGTMDYI 251 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~-------~~~~d~v 251 (359)
.++++||.|+ |.+|...++.+...|++|++++++.++.+.+.++++.. ...|-.+.+.+..+ .+.+|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999986 99999999999999999999999998877765555422 12244444333322 2478999
Q ss_pred EECCCC
Q 018246 252 IDTVSA 257 (359)
Q Consensus 252 id~~g~ 257 (359)
+.+.+.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 998863
No 308
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=96.30 E-value=0.022 Score=50.44 Aligned_cols=122 Identities=20% Similarity=0.157 Sum_probs=83.2
Q ss_pred CCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC-----------HHH-------HH
Q 018246 181 TEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSD-----------PAK-------VK 242 (359)
Q Consensus 181 ~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~-----------~~~-------~~ 242 (359)
..++..+++.|.|.+|+.++..++..|+-|...+-.+.+.+.. +++|++.+--.++ +++ +.
T Consensus 161 tv~pA~vlv~G~Gvagl~aiata~~lG~iVt~rdlrm~~Keqv-~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a 239 (356)
T COG3288 161 TVSPAKVLVIGAGVAGLAAIATAVRLGAIVTARDLRMFKKEQV-ESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVA 239 (356)
T ss_pred cccchhhhhhhHHHHHHHHHHHHhhcceEEehhhhhhHHhhhh-hhcccccccccccccCCCccccCCHHHHHHHHHHHH
Confidence 3577889999999999999999999999999998888887777 7788653321111 122 11
Q ss_pred HhcCCccEEEECCC--Ch----hhHHHHHhccccCCEEEEecCCCC-Cee--eCHHHHHhcCcEEEEeec
Q 018246 243 AAMGTMDYIIDTVS--AV----HSLAPLLGLLKVNGKLVTVGLPEK-PLE--VPIFALVGARRLVGGSNV 303 (359)
Q Consensus 243 ~~~~~~d~vid~~g--~~----~~~~~~~~~l~~~G~~v~~g~~~~-~~~--~~~~~~~~k~~~i~g~~~ 303 (359)
+...++|+||-+.- +. ......+..|+||+.+|++....+ +.. -+-.-...++.+|.|...
T Consensus 240 ~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~n 309 (356)
T COG3288 240 EQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTN 309 (356)
T ss_pred HHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecC
Confidence 22348999998763 21 234788999999999999964332 222 222233456788887444
No 309
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.30 E-value=0.12 Score=43.80 Aligned_cols=98 Identities=21% Similarity=0.257 Sum_probs=59.4
Q ss_pred CCCCCCEEEEECCchHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHH---HcCCc--EEecCCCHHHHHHhcCCccEE-E
Q 018246 180 MTEPGKHLGVAGLGGLGHVAVKIGKAF-GLKVTVISTSPKKESEAIS---KLGAD--AFLVSSDPAKVKAAMGTMDYI-I 252 (359)
Q Consensus 180 ~~~~g~~VlI~G~g~vG~~a~~la~~~-g~~V~~v~~~~~~~~~~~~---~~g~~--~v~~~~~~~~~~~~~~~~d~v-i 252 (359)
.++++++||-+|+|. |..+..+++.. +.+|++++.+++..+.+.+ +++.. .++..+..+.+..+...+|.+ +
T Consensus 37 ~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d~v~~ 115 (196)
T PRK07402 37 RLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPDRVCI 115 (196)
T ss_pred CCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCCEEEE
Confidence 347888888887643 33455555544 4699999999988776633 34533 233222222233333344554 4
Q ss_pred ECCCC-hhhHHHHHhccccCCEEEEec
Q 018246 253 DTVSA-VHSLAPLLGLLKVNGKLVTVG 278 (359)
Q Consensus 253 d~~g~-~~~~~~~~~~l~~~G~~v~~g 278 (359)
+.... ...+..+.+.|+++|+++...
T Consensus 116 ~~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 116 EGGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred ECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 43222 245788899999999998873
No 310
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.29 E-value=0.027 Score=51.93 Aligned_cols=88 Identities=25% Similarity=0.443 Sum_probs=64.5
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChh---
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVH--- 259 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 259 (359)
.|++|.|+|.|.+|...++.++..|.+|++.+++.... .. ..++... . .+.++....|+|+.++....
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~-~~~~~~~----~---~l~ell~~aDiV~l~lP~t~~T~ 219 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPE-AE-KELGAEY----R---PLEELLRESDFVSLHVPLTKETY 219 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChh-hH-HHcCCEe----c---CHHHHHhhCCEEEEeCCCChHHh
Confidence 68899999999999999999999999999999876543 22 3445421 1 23344556899988886432
Q ss_pred -hH-HHHHhccccCCEEEEecC
Q 018246 260 -SL-APLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 260 -~~-~~~~~~l~~~G~~v~~g~ 279 (359)
.+ ...+..|+++..++.++-
T Consensus 220 ~~i~~~~~~~mk~ga~lIN~aR 241 (333)
T PRK13243 220 HMINEERLKLMKPTAILVNTAR 241 (333)
T ss_pred hccCHHHHhcCCCCeEEEECcC
Confidence 12 467888999999888863
No 311
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.28 E-value=0.13 Score=44.22 Aligned_cols=116 Identities=13% Similarity=-0.067 Sum_probs=69.4
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhh
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPK-KESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHS 260 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 260 (359)
-.+.+|||+|+|.++.-=+..+...|++|++++..-. ++..+ .+.|.-..+. +.. -..-..++++||.|++...
T Consensus 23 ~~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l-~~~~~i~~~~-r~~--~~~dl~g~~LViaATdD~~- 97 (223)
T PRK05562 23 SNKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDL-KKYGNLKLIK-GNY--DKEFIKDKHLIVIATDDEK- 97 (223)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHH-HhCCCEEEEe-CCC--ChHHhCCCcEEEECCCCHH-
Confidence 3578999999999999888888889999999986542 33333 2333212221 111 0111258999999999888
Q ss_pred HHHHHhccc-cCCEEEEecCCCCCeeeCHHHHHhc-CcEEEEee
Q 018246 261 LAPLLGLLK-VNGKLVTVGLPEKPLEVPIFALVGA-RRLVGGSN 302 (359)
Q Consensus 261 ~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~k-~~~i~g~~ 302 (359)
++..+...+ ..+.++..........|-+..++.+ .+++.-+.
T Consensus 98 vN~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST 141 (223)
T PRK05562 98 LNNKIRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNT 141 (223)
T ss_pred HHHHHHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEEC
Confidence 665555554 4477777654433333322223333 45554433
No 312
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.024 Score=49.70 Aligned_cols=75 Identities=19% Similarity=0.290 Sum_probs=53.0
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc--CCc---EEecCCCHHHHHHh-------cCCcc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL--GAD---AFLVSSDPAKVKAA-------MGTMD 249 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~--g~~---~v~~~~~~~~~~~~-------~~~~d 249 (359)
++.+++|.|+ |.+|...++.+...|++|+++++++++.+...+.. +.. ...|..+.+.+.++ .+++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678999986 99999999988888999999999987765553333 321 12344554443332 24799
Q ss_pred EEEECCCC
Q 018246 250 YIIDTVSA 257 (359)
Q Consensus 250 ~vid~~g~ 257 (359)
+++.+.+.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99999884
No 313
>PRK07985 oxidoreductase; Provisional
Probab=96.25 E-value=0.095 Score=47.43 Aligned_cols=99 Identities=16% Similarity=0.147 Sum_probs=62.7
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCCh--hhHHHH---HHHcCCc---EEecCCCHHHHHHh-------cC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSP--KKESEA---ISKLGAD---AFLVSSDPAKVKAA-------MG 246 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~--~~~~~~---~~~~g~~---~v~~~~~~~~~~~~-------~~ 246 (359)
.++++||.|+ |++|.++++.+...|++|+++.++. +..+.+ .++.+.. ...|..+.+.+.++ .+
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5678999986 9999999999999999999887543 222222 1233432 22344554333222 24
Q ss_pred CccEEEECCCCh--------------------------hhHHHHHhccccCCEEEEecCCC
Q 018246 247 TMDYIIDTVSAV--------------------------HSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 247 ~~d~vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
++|+++.+.|.. ..++.+...|+.+|+++.++...
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~ 188 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQ 188 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCch
Confidence 789999987631 11234455566789999887543
No 314
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.25 E-value=0.083 Score=41.99 Aligned_cols=96 Identities=13% Similarity=0.069 Sum_probs=71.4
Q ss_pred cccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 018246 163 PLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKV 241 (359)
Q Consensus 163 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 241 (359)
.++|........++..+.--.|++|+|+|- ..+|.-++.++...|++|+...+....++
T Consensus 7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~-------------------- 66 (140)
T cd05212 7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQ-------------------- 66 (140)
T ss_pred ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHH--------------------
Confidence 456666665666666654458999999995 89999999999999999999885432222
Q ss_pred HHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCC
Q 018246 242 KAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 242 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+.....|+|+-++|....+. -+.+++|-.++++|...
T Consensus 67 -~~v~~ADIVvsAtg~~~~i~--~~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 67 -SKVHDADVVVVGSPKPEKVP--TEWIKPGATVINCSPTK 103 (140)
T ss_pred -HHHhhCCEEEEecCCCCccC--HHHcCCCCEEEEcCCCc
Confidence 23346799999999886444 45699999999887654
No 315
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.026 Score=48.75 Aligned_cols=72 Identities=21% Similarity=0.263 Sum_probs=50.8
Q ss_pred CEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-Cc-EEecCCCHHHHHHhc-----CCccEEEECCC
Q 018246 185 KHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLG-AD-AFLVSSDPAKVKAAM-----GTMDYIIDTVS 256 (359)
Q Consensus 185 ~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g-~~-~v~~~~~~~~~~~~~-----~~~d~vid~~g 256 (359)
++++|.|+ |++|...+..+...|++|+++++++++.+.+ ++++ .. ...|-.+.+.+..+. +++|+++.++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-HhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 46889886 9999999988888999999999998876655 4443 21 223444544333322 26899998876
Q ss_pred C
Q 018246 257 A 257 (359)
Q Consensus 257 ~ 257 (359)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 4
No 316
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.23 E-value=0.036 Score=47.61 Aligned_cols=96 Identities=18% Similarity=0.179 Sum_probs=61.8
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe---------cCCC-----HHH--HH-Hh
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFL---------VSSD-----PAK--VK-AA 244 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~---------~~~~-----~~~--~~-~~ 244 (359)
.++.+||+.|+|. |.-++-+|. .|.+|++++.++...+.+.++.+..... ...+ .+. .. ..
T Consensus 33 ~~~~rvLd~GCG~-G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~ 110 (213)
T TIGR03840 33 PAGARVFVPLCGK-SLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAAD 110 (213)
T ss_pred CCCCeEEEeCCCc-hhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCccc
Confidence 4677999998864 666777765 6999999999999888764544432100 0000 000 00 01
Q ss_pred cCCccEEEECCCC--------hhhHHHHHhccccCCEEEEecC
Q 018246 245 MGTMDYIIDTVSA--------VHSLAPLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 245 ~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~ 279 (359)
.+.+|.++|+..- ...+..+.+.|+|+|+++..+.
T Consensus 111 ~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 111 LGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred CCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 2358999996541 2246788999999998776654
No 317
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.029 Score=49.17 Aligned_cols=75 Identities=24% Similarity=0.388 Sum_probs=52.3
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GAD---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
.+.+++|.|+ |.+|...++.+...|++|++++++++..+.+.+.+ +.. ...|..+.+.+..+ .+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999986 99999999999889999999999877654443322 221 23455554433322 2478
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999999884
No 318
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.037 Score=49.44 Aligned_cols=74 Identities=19% Similarity=0.267 Sum_probs=51.7
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-----Cc-EE--ecCCCHHHHHHh-------cC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLG-----AD-AF--LVSSDPAKVKAA-------MG 246 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g-----~~-~v--~~~~~~~~~~~~-------~~ 246 (359)
.++++||.|+ |.+|..+++.+.+.|++|+++++++++.+...+++. .. .+ .|..+.+.+..+ .+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3678999986 999999999999999999999998776554433321 11 12 244444433322 23
Q ss_pred CccEEEECCC
Q 018246 247 TMDYIIDTVS 256 (359)
Q Consensus 247 ~~d~vid~~g 256 (359)
++|++|.+.|
T Consensus 86 ~~d~li~~ag 95 (276)
T PRK05875 86 RLHGVVHCAG 95 (276)
T ss_pred CCCEEEECCC
Confidence 7899999887
No 319
>PRK08317 hypothetical protein; Provisional
Probab=96.19 E-value=0.041 Score=47.82 Aligned_cols=99 Identities=20% Similarity=0.284 Sum_probs=65.1
Q ss_pred CCCCCCCEEEEECCchHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHHc---CC-cEEecCCCHHHHHHhcCCccEEE
Q 018246 179 GMTEPGKHLGVAGLGGLGHVAVKIGKAFG--LKVTVISTSPKKESEAISKL---GA-DAFLVSSDPAKVKAAMGTMDYII 252 (359)
Q Consensus 179 ~~~~~g~~VlI~G~g~vG~~a~~la~~~g--~~V~~v~~~~~~~~~~~~~~---g~-~~v~~~~~~~~~~~~~~~~d~vi 252 (359)
..+.++++||.+|+|. |..+..+++..+ .++++++.+++..+.+.+.. +. ..+...+ ........+.+|+|+
T Consensus 15 ~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d-~~~~~~~~~~~D~v~ 92 (241)
T PRK08317 15 LAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGD-ADGLPFPDGSFDAVR 92 (241)
T ss_pred cCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecc-cccCCCCCCCceEEE
Confidence 3457899999999976 888889998874 59999999998887773331 11 1111111 111111124688887
Q ss_pred ECC-----CC-hhhHHHHHhccccCCEEEEecC
Q 018246 253 DTV-----SA-VHSLAPLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 253 d~~-----g~-~~~~~~~~~~l~~~G~~v~~g~ 279 (359)
... .. ...+..+.+.|+++|.++....
T Consensus 93 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 125 (241)
T PRK08317 93 SDRVLQHLEDPARALAEIARVLRPGGRVVVLDT 125 (241)
T ss_pred EechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence 532 22 2357899999999999987753
No 320
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.19 E-value=0.033 Score=48.43 Aligned_cols=74 Identities=19% Similarity=0.098 Sum_probs=51.1
Q ss_pred CCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHH----h---cCCccEEEEC
Q 018246 184 GKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADA-FLVSSDPAKVKA----A---MGTMDYIIDT 254 (359)
Q Consensus 184 g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~----~---~~~~d~vid~ 254 (359)
++++||.|+ |++|..+++.+...|++|+++++++++.....+..+... ..|..+.+.+.. + .+++|+++.+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 457999986 999999999998999999999988765433335555432 234444333222 2 2469999998
Q ss_pred CCC
Q 018246 255 VSA 257 (359)
Q Consensus 255 ~g~ 257 (359)
.|.
T Consensus 82 ag~ 84 (236)
T PRK06483 82 ASD 84 (236)
T ss_pred Ccc
Confidence 874
No 321
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.024 Score=49.92 Aligned_cols=75 Identities=25% Similarity=0.330 Sum_probs=52.5
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCc---EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS---KLGAD---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+ +.+.. ...|..+.+.+.++ .+.+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999986 999999999888899999999999876554422 33322 12344444333332 2478
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++.+.|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999998874
No 322
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.18 E-value=0.06 Score=47.88 Aligned_cols=97 Identities=16% Similarity=0.272 Sum_probs=73.2
Q ss_pred ccccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 018246 162 APLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK 240 (359)
Q Consensus 162 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (359)
..+||+....+..++..+---.|++|+|+|- ..+|.-.+.+....|++|++..+....
T Consensus 130 ~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~--------------------- 188 (279)
T PRK14178 130 GFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTEN--------------------- 188 (279)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhH---------------------
Confidence 3567776666777776654458999999996 599999999999999999998765422
Q ss_pred HHHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCC
Q 018246 241 VKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 241 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+.+.....|+++.++|.+..+... .++++..++++|...
T Consensus 189 L~~~~~~ADIvI~Avgk~~lv~~~--~vk~GavVIDVgi~~ 227 (279)
T PRK14178 189 LKAELRQADILVSAAGKAGFITPD--MVKPGATVIDVGINQ 227 (279)
T ss_pred HHHHHhhCCEEEECCCcccccCHH--HcCCCcEEEEeeccc
Confidence 333445689999999977644443 379999999999764
No 323
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.18 E-value=0.037 Score=48.92 Aligned_cols=72 Identities=19% Similarity=0.218 Sum_probs=50.9
Q ss_pred EEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE--EecCCCHHHHHHh-------cCCccEEE
Q 018246 186 HLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GADA--FLVSSDPAKVKAA-------MGTMDYII 252 (359)
Q Consensus 186 ~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~~--v~~~~~~~~~~~~-------~~~~d~vi 252 (359)
++||.|+ +++|.+.++.+...|++|+++++++++.+.+.+++ +..+ ..|..+.+.+.++ .+++|+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 5889886 99999999999989999999999988766554433 3212 2344454433332 24799999
Q ss_pred ECCCC
Q 018246 253 DTVSA 257 (359)
Q Consensus 253 d~~g~ 257 (359)
++.|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 98874
No 324
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.17 E-value=0.031 Score=51.53 Aligned_cols=88 Identities=18% Similarity=0.260 Sum_probs=64.6
Q ss_pred EEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc--------CCc---EEecCCCHHHHHHhcCCccEEEEC
Q 018246 186 HLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL--------GAD---AFLVSSDPAKVKAAMGTMDYIIDT 254 (359)
Q Consensus 186 ~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~--------g~~---~v~~~~~~~~~~~~~~~~d~vid~ 254 (359)
+|.|+|+|.+|.+.+..+...|.+|.+.++++++.+.+ ++. |.. .+....+ ..+.....|+|+-+
T Consensus 6 ~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i-~~~~~~~~~~~g~~~~~~~~~~~~---~~e~~~~aD~Vi~~ 81 (328)
T PRK14618 6 RVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAAL-AAERENREYLPGVALPAELYPTAD---PEEALAGADFAVVA 81 (328)
T ss_pred eEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHhCcccccCCCCcCCCCeEEeCC---HHHHHcCCCEEEEE
Confidence 68999999999999999988899999999998877766 333 210 0111111 22334578999999
Q ss_pred CCChhhHHHHHhccccCCEEEEec
Q 018246 255 VSAVHSLAPLLGLLKVNGKLVTVG 278 (359)
Q Consensus 255 ~g~~~~~~~~~~~l~~~G~~v~~g 278 (359)
+.... +...++.++++-.++.+.
T Consensus 82 v~~~~-~~~v~~~l~~~~~vi~~~ 104 (328)
T PRK14618 82 VPSKA-LRETLAGLPRALGYVSCA 104 (328)
T ss_pred CchHH-HHHHHHhcCcCCEEEEEe
Confidence 99887 778888888877777663
No 325
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.076 Score=46.67 Aligned_cols=99 Identities=19% Similarity=0.222 Sum_probs=61.1
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEe-CChhhHHHHHHH---cCCcE---EecCCCHHHH----HHh------
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVIS-TSPKKESEAISK---LGADA---FLVSSDPAKV----KAA------ 244 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~-~~~~~~~~~~~~---~g~~~---v~~~~~~~~~----~~~------ 244 (359)
.++++||.|+ |++|.++++.+...|++|+++. +.+++.+....+ .+... ..|..+.+.+ .++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 4678999986 9999999999999999998875 454544433222 23221 1233332211 111
Q ss_pred -cC--CccEEEECCCChh-------------------------hHHHHHhccccCCEEEEecCCC
Q 018246 245 -MG--TMDYIIDTVSAVH-------------------------SLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 245 -~~--~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
.+ ++|++++++|... ..+.++..++..|+++.++...
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~ 147 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAA 147 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcc
Confidence 12 6999999887310 1123455666779999987654
No 326
>PRK06398 aldose dehydrogenase; Validated
Probab=96.16 E-value=0.038 Score=48.91 Aligned_cols=69 Identities=20% Similarity=0.208 Sum_probs=48.9
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHHh-------cCCccEEEE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD-AFLVSSDPAKVKAA-------MGTMDYIID 253 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~-------~~~~d~vid 253 (359)
.|+++||.|+ |++|...+..+...|++|+++++++++.. ... ...|-.+.+.+.++ .+.+|++++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN------DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC------ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4689999986 99999999999999999999998765421 111 22355554433332 247999999
Q ss_pred CCCC
Q 018246 254 TVSA 257 (359)
Q Consensus 254 ~~g~ 257 (359)
+.|.
T Consensus 79 ~Ag~ 82 (258)
T PRK06398 79 NAGI 82 (258)
T ss_pred CCCC
Confidence 8874
No 327
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.16 E-value=0.031 Score=48.73 Aligned_cols=75 Identities=23% Similarity=0.350 Sum_probs=51.7
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc---EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK---LGAD---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
.+.+++|.|+ |.+|...+..+...|++|+++++++++.+...++ .+.. ...|..+.+.+..+ .+++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 3578999986 9999999998888999999999998776554333 2322 12344444333322 2478
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999998874
No 328
>PLN02366 spermidine synthase
Probab=96.16 E-value=0.063 Score=48.81 Aligned_cols=96 Identities=19% Similarity=0.158 Sum_probs=62.2
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCC---------cEEecCCCHHHHHHh-cCCccE
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGA---------DAFLVSSDPAKVKAA-MGTMDY 250 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~---------~~v~~~~~~~~~~~~-~~~~d~ 250 (359)
...++|||+|+|. |.++..++++-+. +|++++.+++-.+.+.+.+.. -.++..+....+++. .+.||+
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv 168 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA 168 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence 4467899998765 5567788887765 899999888766666333331 112222222345544 347999
Q ss_pred EEECCCC----------hhhHHHHHhccccCCEEEEec
Q 018246 251 IIDTVSA----------VHSLAPLLGLLKVNGKLVTVG 278 (359)
Q Consensus 251 vid~~g~----------~~~~~~~~~~l~~~G~~v~~g 278 (359)
|+.-... ...++.+.++|+++|.++.-+
T Consensus 169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 169 IIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred EEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 9853332 134778899999999997643
No 329
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.15 E-value=0.031 Score=51.53 Aligned_cols=77 Identities=21% Similarity=0.337 Sum_probs=51.8
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChh---------------------hHH---HHHHHcCCc----EEe
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPK---------------------KES---EAISKLGAD----AFL 233 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~---------------------~~~---~~~~~~g~~----~v~ 233 (359)
.+.+|+|+|+|++|..++..+...|. ++++++.+.- +.+ ..+++++.. .+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~ 102 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVV 102 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEe
Confidence 34689999999999999999999999 8888887631 111 112344321 111
Q ss_pred cCCCHHHHHHhcCCccEEEECCCChh
Q 018246 234 VSSDPAKVKAAMGTMDYIIDTVSAVH 259 (359)
Q Consensus 234 ~~~~~~~~~~~~~~~d~vid~~g~~~ 259 (359)
..-..+.+.++..++|+|+||..+..
T Consensus 103 ~~~~~~~~~~~~~~~DlVid~~D~~~ 128 (338)
T PRK12475 103 TDVTVEELEELVKEVDLIIDATDNFD 128 (338)
T ss_pred ccCCHHHHHHHhcCCCEEEEcCCCHH
Confidence 11123445666678999999998765
No 330
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.15 E-value=0.047 Score=52.36 Aligned_cols=88 Identities=26% Similarity=0.343 Sum_probs=60.4
Q ss_pred EEEEEC-CchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChh---hH
Q 018246 186 HLGVAG-LGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVH---SL 261 (359)
Q Consensus 186 ~VlI~G-~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~---~~ 261 (359)
+|.|+| .|.+|.+.+..++..|.+|+++++++++.....+++|... ..+ ..+.....|+|+-|+.... .+
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~---~~~---~~e~~~~aDvVIlavp~~~~~~vl 75 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY---AND---NIDAAKDADIVIISVPINVTEDVI 75 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee---ccC---HHHHhccCCEEEEecCHHHHHHHH
Confidence 578887 6999999999999999999999999887655546777531 111 1223346788888887654 22
Q ss_pred HHHHhccccCCEEEEecC
Q 018246 262 APLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 262 ~~~~~~l~~~G~~v~~g~ 279 (359)
......++++..+++++.
T Consensus 76 ~~l~~~l~~~~iViDvsS 93 (437)
T PRK08655 76 KEVAPHVKEGSLLMDVTS 93 (437)
T ss_pred HHHHhhCCCCCEEEEccc
Confidence 333445566667777764
No 331
>PRK00811 spermidine synthase; Provisional
Probab=96.14 E-value=0.076 Score=47.79 Aligned_cols=94 Identities=18% Similarity=0.171 Sum_probs=62.3
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCC-------c---EEecCCCHHHHHHhcCCccEE
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGA-------D---AFLVSSDPAKVKAAMGTMDYI 251 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~-------~---~v~~~~~~~~~~~~~~~~d~v 251 (359)
..++||++|+|. |..+..++++.+. +|++++.+++-.+.+.+.+.. + .++..+....+....+.+|+|
T Consensus 76 ~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDvI 154 (283)
T PRK00811 76 NPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAETENSFDVI 154 (283)
T ss_pred CCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhhCCCcccEE
Confidence 457899998765 6667777777665 899999999887777443421 1 223223234444434589999
Q ss_pred EECCCC----------hhhHHHHHhccccCCEEEEe
Q 018246 252 IDTVSA----------VHSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 252 id~~g~----------~~~~~~~~~~l~~~G~~v~~ 277 (359)
+.-... ...+..+.+.|+++|.++.-
T Consensus 155 i~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 155 IVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred EECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 864321 22357788999999999875
No 332
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.14 E-value=0.049 Score=44.30 Aligned_cols=98 Identities=18% Similarity=0.299 Sum_probs=64.7
Q ss_pred cccccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH
Q 018246 161 GAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPA 239 (359)
Q Consensus 161 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~ 239 (359)
...+||+....+..++..+.--.|++|+|+|- ..+|.-.+.++...|+.|+...+....++
T Consensus 13 ~~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~------------------ 74 (160)
T PF02882_consen 13 PGFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQ------------------ 74 (160)
T ss_dssp TSS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHH------------------
T ss_pred CCCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccc------------------
Confidence 35667777777777777665468999999996 68999999999999999999776543332
Q ss_pred HHHHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCC
Q 018246 240 KVKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 240 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+.....|+|+.++|.+..+. -..++++..++++|...
T Consensus 75 ---~~~~~ADIVVsa~G~~~~i~--~~~ik~gavVIDvG~~~ 111 (160)
T PF02882_consen 75 ---EITRRADIVVSAVGKPNLIK--ADWIKPGAVVIDVGINY 111 (160)
T ss_dssp ---HHHTTSSEEEE-SSSTT-B---GGGS-TTEEEEE--CEE
T ss_pred ---ceeeeccEEeeeeccccccc--cccccCCcEEEecCCcc
Confidence 33346899999999887433 35789999999998643
No 333
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.033 Score=49.30 Aligned_cols=74 Identities=15% Similarity=0.254 Sum_probs=51.2
Q ss_pred CCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc---EEecCCCHHHHHHh-------cCCcc
Q 018246 184 GKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK---LGAD---AFLVSSDPAKVKAA-------MGTMD 249 (359)
Q Consensus 184 g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~-------~~~~d 249 (359)
+.++||.|+ |.+|..+++.+...|++|++++++++..+.+.+. .+.. ...|..+.+.+.++ .+++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357899986 9999999999999999999999998765544332 2322 12344444333322 24789
Q ss_pred EEEECCCC
Q 018246 250 YIIDTVSA 257 (359)
Q Consensus 250 ~vid~~g~ 257 (359)
+++.+.|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999874
No 334
>PRK06720 hypothetical protein; Provisional
Probab=96.13 E-value=0.054 Score=44.70 Aligned_cols=75 Identities=17% Similarity=0.234 Sum_probs=50.2
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc---EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK---LGAD---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
.+.+++|.|+ +++|...+..+...|++|++++++.++.+...++ .+.. ...|..+.+.+.++ .++.
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999986 8999999998888999999999887765443233 2422 12333443332221 2468
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|++++++|.
T Consensus 95 DilVnnAG~ 103 (169)
T PRK06720 95 DMLFQNAGL 103 (169)
T ss_pred CEEEECCCc
Confidence 888888774
No 335
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.055 Score=48.33 Aligned_cols=73 Identities=22% Similarity=0.303 Sum_probs=52.7
Q ss_pred CEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc---EEecCCCHHHHHHh-------cCCccEEEE
Q 018246 185 KHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD---AFLVSSDPAKVKAA-------MGTMDYIID 253 (359)
Q Consensus 185 ~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~-------~~~~d~vid 253 (359)
.++||.|+ |.+|...++.+...|.+|+++++++++.+.+.+..+.. ...|..+.+.+..+ .+++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 47899986 99999999988889999999999988877764444422 12345554433332 246899999
Q ss_pred CCCC
Q 018246 254 TVSA 257 (359)
Q Consensus 254 ~~g~ 257 (359)
++|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 9874
No 336
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=96.11 E-value=0.028 Score=50.01 Aligned_cols=98 Identities=18% Similarity=0.110 Sum_probs=63.2
Q ss_pred CCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC-cEEecCCCHHHHH-Hh-cCCccEEEECC-
Q 018246 180 MTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGA-DAFLVSSDPAKVK-AA-MGTMDYIIDTV- 255 (359)
Q Consensus 180 ~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~-~~-~~~~d~vid~~- 255 (359)
.++++.+||-+|+|. |..+..+++..+++|++++.+++..+.+.+.... ..+- ....+... .. .+.||+|+..-
T Consensus 49 ~l~~~~~VLDiGcG~-G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~-~~~~D~~~~~~~~~~FD~V~s~~~ 126 (263)
T PTZ00098 49 ELNENSKVLDIGSGL-GGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIE-FEANDILKKDFPENTFDMIYSRDA 126 (263)
T ss_pred CCCCCCEEEEEcCCC-ChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceE-EEECCcccCCCCCCCeEEEEEhhh
Confidence 348999999998863 5556677777788999999999888777444332 1111 00011111 11 13699998621
Q ss_pred ----C---ChhhHHHHHhccccCCEEEEecC
Q 018246 256 ----S---AVHSLAPLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 256 ----g---~~~~~~~~~~~l~~~G~~v~~g~ 279 (359)
+ -...+..+.+.|+|+|+++....
T Consensus 127 l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 127 ILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred HHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 1 12356788899999999998754
No 337
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.10 E-value=0.045 Score=48.03 Aligned_cols=72 Identities=18% Similarity=0.240 Sum_probs=52.1
Q ss_pred EEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEEEEC
Q 018246 186 HLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADA---FLVSSDPAKVKAA-------MGTMDYIIDT 254 (359)
Q Consensus 186 ~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~vid~ 254 (359)
+++|.|+ |++|...+..+...|++|+++++++++.+.+...++.+. ..|-.+.+.+..+ .++.|+++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 5888886 999999999999999999999999888776645455321 2344444333322 2479999998
Q ss_pred CCC
Q 018246 255 VSA 257 (359)
Q Consensus 255 ~g~ 257 (359)
+|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 874
No 338
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.027 Score=51.25 Aligned_cols=76 Identities=28% Similarity=0.335 Sum_probs=52.6
Q ss_pred CCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-----CCc---EEecCCCHHHHHHh-------c
Q 018246 182 EPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL-----GAD---AFLVSSDPAKVKAA-------M 245 (359)
Q Consensus 182 ~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~-----g~~---~v~~~~~~~~~~~~-------~ 245 (359)
..+++|||.|+ |++|..+++.+...|++|++++++.++.+.+.+++ +.. ...|..+.+.+.++ .
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 36789999986 99999999988888999999999887755443322 111 12344554433332 2
Q ss_pred CCccEEEECCCC
Q 018246 246 GTMDYIIDTVSA 257 (359)
Q Consensus 246 ~~~d~vid~~g~ 257 (359)
+++|++|.++|.
T Consensus 94 ~~iD~li~nAg~ 105 (306)
T PRK06197 94 PRIDLLINNAGV 105 (306)
T ss_pred CCCCEEEECCcc
Confidence 468999998873
No 339
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.09 E-value=0.18 Score=46.17 Aligned_cols=89 Identities=19% Similarity=0.269 Sum_probs=58.4
Q ss_pred CEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH----------HcCCc------EEecCCCHHHHHHhcCCc
Q 018246 185 KHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS----------KLGAD------AFLVSSDPAKVKAAMGTM 248 (359)
Q Consensus 185 ~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~----------~~g~~------~v~~~~~~~~~~~~~~~~ 248 (359)
++|.|+|+|.+|...++++...|.+|.+.+.+++..+.+.+ +.+.. .+-.. ..+.....+.
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~---~~l~~av~~a 84 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFV---ATIEACVADA 84 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceec---CCHHHHhcCC
Confidence 57999999999999999988999999999999886654322 11110 00001 1233444689
Q ss_pred cEEEECCCChh-----hHHHHHhccccCCEEEEe
Q 018246 249 DYIIDTVSAVH-----SLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 249 d~vid~~g~~~-----~~~~~~~~l~~~G~~v~~ 277 (359)
|+|++++.... .+..+.+.++++. ++..
T Consensus 85 DlViEavpE~l~vK~~lf~~l~~~~~~~a-IlaS 117 (321)
T PRK07066 85 DFIQESAPEREALKLELHERISRAAKPDA-IIAS 117 (321)
T ss_pred CEEEECCcCCHHHHHHHHHHHHHhCCCCe-EEEE
Confidence 99999998654 2344445555554 5444
No 340
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.086 Score=46.31 Aligned_cols=75 Identities=19% Similarity=0.213 Sum_probs=49.5
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEE-eCChhhHHHHHHHc---CCc---EEecCCCHHHHHHh----c-----
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVI-STSPKKESEAISKL---GAD---AFLVSSDPAKVKAA----M----- 245 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v-~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~----~----- 245 (359)
.+.+++|.|+ |.+|...++.+...|++|++. .++.++.+.+.+++ +.. ...|-.+.+.+.+. .
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 3578999986 999999999998899988775 67766654443333 222 12355554433222 1
Q ss_pred ----CCccEEEECCCC
Q 018246 246 ----GTMDYIIDTVSA 257 (359)
Q Consensus 246 ----~~~d~vid~~g~ 257 (359)
.++|++|.+.|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 258999998874
No 341
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.09 E-value=0.054 Score=47.21 Aligned_cols=75 Identities=25% Similarity=0.334 Sum_probs=53.9
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADA---FLVSSDPAKVKAA-------MGTMDYI 251 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~v 251 (359)
++.++||.|+ |.+|..++..+...|++|++.+++.++.+.+....+... ..|-.+.+.+.++ .+++|.+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999986 999999999998899999999888887776645555321 2344444433332 2479999
Q ss_pred EECCCC
Q 018246 252 IDTVSA 257 (359)
Q Consensus 252 id~~g~ 257 (359)
+.+.|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 999874
No 342
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.09 E-value=0.04 Score=48.68 Aligned_cols=75 Identities=25% Similarity=0.342 Sum_probs=53.5
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GAD---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
.+.++||.|+ |.+|...++.+...|++|++++++.++.+.+.+.+ +.. ...|..+.+.+.++ .+.+
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5688999986 99999999999989999999999988766553322 322 22355555444322 2478
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++.+.|.
T Consensus 91 d~vi~~ag~ 99 (259)
T PRK08213 91 DILVNNAGA 99 (259)
T ss_pred CEEEECCCC
Confidence 999999874
No 343
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.08 E-value=0.051 Score=48.21 Aligned_cols=74 Identities=15% Similarity=0.324 Sum_probs=49.5
Q ss_pred CCCEEEEECC-c--hHHHHHHHHHHHCCCeEEEEeCChh---hHHHHHHHcCCcE--EecCCCHHHHHHh-------cCC
Q 018246 183 PGKHLGVAGL-G--GLGHVAVKIGKAFGLKVTVISTSPK---KESEAISKLGADA--FLVSSDPAKVKAA-------MGT 247 (359)
Q Consensus 183 ~g~~VlI~G~-g--~vG~~a~~la~~~g~~V~~v~~~~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~-------~~~ 247 (359)
.|++++|.|+ + ++|.++++.+...|++|+++++++. ..+.+.++.|... ..|-.+.+.+.++ .+.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5678999987 4 7999999888889999999887742 2333333345332 2455555443332 247
Q ss_pred ccEEEECCC
Q 018246 248 MDYIIDTVS 256 (359)
Q Consensus 248 ~d~vid~~g 256 (359)
+|+++++.|
T Consensus 87 iDilVnnag 95 (260)
T PRK06603 87 FDFLLHGMA 95 (260)
T ss_pred ccEEEEccc
Confidence 999999886
No 344
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=96.08 E-value=0.033 Score=44.85 Aligned_cols=89 Identities=24% Similarity=0.273 Sum_probs=58.3
Q ss_pred EEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecC-------CC-HHHHHHhcCCccEEEECCCCh
Q 018246 187 LGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVS-------SD-PAKVKAAMGTMDYIIDTVSAV 258 (359)
Q Consensus 187 VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~-------~~-~~~~~~~~~~~d~vid~~g~~ 258 (359)
|+|+|+|.+|...+..++..|.+|..+.+.+ +.+.+ ++.|..-.... .. ..........+|++|-|+-..
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa~ 78 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGHDVTLVSRSP-RLEAI-KEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKAY 78 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTCEEEEEESHH-HHHHH-HHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSGG
T ss_pred CEEECcCHHHHHHHHHHHHCCCceEEEEccc-cHHhh-hheeEEEEecccceecccccccCcchhccCCCcEEEEEeccc
Confidence 6899999999998888888999999999998 77765 66663221111 00 000112335899999999765
Q ss_pred h---hHHHHHhccccCCEEEEe
Q 018246 259 H---SLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 259 ~---~~~~~~~~l~~~G~~v~~ 277 (359)
. .++.+...+.+...++.+
T Consensus 79 ~~~~~l~~l~~~~~~~t~iv~~ 100 (151)
T PF02558_consen 79 QLEQALQSLKPYLDPNTTIVSL 100 (151)
T ss_dssp GHHHHHHHHCTGEETTEEEEEE
T ss_pred chHHHHHHHhhccCCCcEEEEE
Confidence 5 334445555666677766
No 345
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.038 Score=48.58 Aligned_cols=75 Identities=21% Similarity=0.290 Sum_probs=52.4
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc-E--EecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GAD-A--FLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~-------~~~~ 248 (359)
.+.++||.|+ |++|...++.+...|++|++++++.++.+.+.+++ +.. . ..|..+.+.+..+ .+.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999986 99999999999999999999999887766554432 321 1 1244444333222 2468
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++.+.+.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999998873
No 346
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.08 E-value=0.054 Score=47.74 Aligned_cols=75 Identities=17% Similarity=0.238 Sum_probs=51.3
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCc---EEecCCCHHHHHHh-------cCCccE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPK-KESEAISKLGAD---AFLVSSDPAKVKAA-------MGTMDY 250 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~-~~~~~~~~~g~~---~v~~~~~~~~~~~~-------~~~~d~ 250 (359)
.++++||.|+ +++|.++++.+...|++|+++++++. +.....++.+.+ ...|-.+.+.+.++ .+++|+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999986 99999999999999999999887643 222222445532 22355555443332 247999
Q ss_pred EEECCCC
Q 018246 251 IIDTVSA 257 (359)
Q Consensus 251 vid~~g~ 257 (359)
++++.|.
T Consensus 87 lv~~ag~ 93 (251)
T PRK12481 87 LINNAGI 93 (251)
T ss_pred EEECCCc
Confidence 9998874
No 347
>PRK06823 ornithine cyclodeaminase; Validated
Probab=96.07 E-value=0.12 Score=47.20 Aligned_cols=106 Identities=13% Similarity=0.103 Sum_probs=71.5
Q ss_pred HhcCCCCCCCEEEEECCchHHHHHHHHHHHC-CC-eEEEEeCChhhHHHHHHHc---CCcEEecCCCHHHHHHhcCCccE
Q 018246 176 KYYGMTEPGKHLGVAGLGGLGHVAVKIGKAF-GL-KVTVISTSPKKESEAISKL---GADAFLVSSDPAKVKAAMGTMDY 250 (359)
Q Consensus 176 ~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~-g~-~V~~v~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~d~ 250 (359)
+...+ +..+++.|+|+|..+.+.++..... .. +|.+.++++++.+.+.+.+ +.+... . +..++...+.|+
T Consensus 121 ~~La~-~d~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~-~---~~~~~av~~ADI 195 (315)
T PRK06823 121 RLLAP-QHVSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNT-T---LDAAEVAHAANL 195 (315)
T ss_pred HHhcC-CCCCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEE-E---CCHHHHhcCCCE
Confidence 34444 5567889999999999888777654 44 8999999999977664433 333221 1 223455678999
Q ss_pred EEECCCChh-hHHHHHhccccCCEEEEecCCCC-CeeeCH
Q 018246 251 IIDTVSAVH-SLAPLLGLLKVNGKLVTVGLPEK-PLEVPI 288 (359)
Q Consensus 251 vid~~g~~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~ 288 (359)
|+-++++.. .++ .+.++++-.+..+|.... ...++.
T Consensus 196 V~taT~s~~P~~~--~~~l~~G~hi~~iGs~~p~~~Eld~ 233 (315)
T PRK06823 196 IVTTTPSREPLLQ--AEDIQPGTHITAVGADSPGKQELDA 233 (315)
T ss_pred EEEecCCCCceeC--HHHcCCCcEEEecCCCCcccccCCH
Confidence 998877544 233 246889999999987653 334443
No 348
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.06 E-value=0.022 Score=57.63 Aligned_cols=76 Identities=18% Similarity=0.258 Sum_probs=53.5
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChh---------------------hHHHHHHHcCCcEEecCCCH-H
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPK---------------------KESEAISKLGADAFLVSSDP-A 239 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~---------------------~~~~~~~~~g~~~v~~~~~~-~ 239 (359)
..+++|+|+|+|+.|++++..++..|.+|+++++.+. +.+.+ +++|++...+..-. +
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~-~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIF-SAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHH-HHCCeEEECCCEeCCc
Confidence 3588999999999999999999999999999987543 23344 67776544332110 1
Q ss_pred -HHHHhcCCccEEEECCCCh
Q 018246 240 -KVKAAMGTMDYIIDTVSAV 258 (359)
Q Consensus 240 -~~~~~~~~~d~vid~~g~~ 258 (359)
.+..+..+||.||.++|..
T Consensus 404 i~~~~~~~~~DavilAtGa~ 423 (654)
T PRK12769 404 ISLESLLEDYDAVFVGVGTY 423 (654)
T ss_pred CCHHHHHhcCCEEEEeCCCC
Confidence 1223334799999988853
No 349
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.05 E-value=0.048 Score=48.76 Aligned_cols=74 Identities=23% Similarity=0.337 Sum_probs=52.3
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GAD---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
.+++++|.|+ |++|++.+..+...|++|+++++++++.+.+.+++ +.. ...|..+.+.+..+ .+++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999986 99999999999999999999999887665553332 322 12344444333322 2479
Q ss_pred cEEEECCC
Q 018246 249 DYIIDTVS 256 (359)
Q Consensus 249 d~vid~~g 256 (359)
|+++.++|
T Consensus 89 d~li~~ag 96 (278)
T PRK08277 89 DILINGAG 96 (278)
T ss_pred CEEEECCC
Confidence 99999987
No 350
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=96.04 E-value=0.022 Score=46.46 Aligned_cols=81 Identities=19% Similarity=0.205 Sum_probs=57.0
Q ss_pred EEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-Cc---------EEecCCCHHHHHHhcCCccEEEECC
Q 018246 186 HLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLG-AD---------AFLVSSDPAKVKAAMGTMDYIIDTV 255 (359)
Q Consensus 186 ~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g-~~---------~v~~~~~~~~~~~~~~~~d~vid~~ 255 (359)
+|.|+|+|..|.+++..+...|.+|.+..++++..+.+.+... .. .+.-. +.+++...+.|+++-++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t---~dl~~a~~~ad~Iiiav 77 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKAT---TDLEEALEDADIIIIAV 77 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEE---SSHHHHHTT-SEEEE-S
T ss_pred CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccc---cCHHHHhCcccEEEecc
Confidence 4889999999999999999999999999999988877733222 00 11111 23445557899999999
Q ss_pred CChhhHHHHHhcccc
Q 018246 256 SAVHSLAPLLGLLKV 270 (359)
Q Consensus 256 g~~~~~~~~~~~l~~ 270 (359)
.+.. ++..++.+++
T Consensus 78 Ps~~-~~~~~~~l~~ 91 (157)
T PF01210_consen 78 PSQA-HREVLEQLAP 91 (157)
T ss_dssp -GGG-HHHHHHHHTT
T ss_pred cHHH-HHHHHHHHhh
Confidence 9876 6666666665
No 351
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.04 E-value=0.048 Score=50.20 Aligned_cols=86 Identities=23% Similarity=0.285 Sum_probs=63.0
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChh---
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVH--- 259 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 259 (359)
.|.+|.|+|.|.+|...++.++..|.+|++.+++++..... .. .. ..+.++....|+|+.++....
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~-----~~----~~--~~l~ell~~aDiVil~lP~t~~t~ 213 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDF-----LT----YK--DSVKEAIKDADIISLHVPANKESY 213 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhh-----hh----cc--CCHHHHHhcCCEEEEeCCCcHHHH
Confidence 67789999999999999999999999999999886542211 00 11 124455567899998887542
Q ss_pred --hHHHHHhccccCCEEEEecC
Q 018246 260 --SLAPLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 260 --~~~~~~~~l~~~G~~v~~g~ 279 (359)
.-...+..|+++..+|.++-
T Consensus 214 ~li~~~~l~~mk~gavlIN~aR 235 (330)
T PRK12480 214 HLFDKAMFDHVKKGAILVNAAR 235 (330)
T ss_pred HHHhHHHHhcCCCCcEEEEcCC
Confidence 22466788899888888854
No 352
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=96.04 E-value=0.049 Score=49.81 Aligned_cols=89 Identities=30% Similarity=0.403 Sum_probs=65.8
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCC-Chhh
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVS-AVHS 260 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g-~~~~ 260 (359)
-.|+++-|+|.|.||++.++.++..|.+|...++++. .+..+..+++++- +.++....|++.-+.+ ++.+
T Consensus 144 l~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~--~~~~~~~~~~y~~-------l~ell~~sDii~l~~Plt~~T 214 (324)
T COG1052 144 LRGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN--PEAEKELGARYVD-------LDELLAESDIISLHCPLTPET 214 (324)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC--hHHHhhcCceecc-------HHHHHHhCCEEEEeCCCChHH
Confidence 3589999999999999999999999999999998875 2221445555431 4455567888865444 4432
Q ss_pred ---H-HHHHhccccCCEEEEecC
Q 018246 261 ---L-APLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 261 ---~-~~~~~~l~~~G~~v~~g~ 279 (359)
+ ...+..|++++.+|.++-
T Consensus 215 ~hLin~~~l~~mk~ga~lVNtaR 237 (324)
T COG1052 215 RHLINAEELAKMKPGAILVNTAR 237 (324)
T ss_pred hhhcCHHHHHhCCCCeEEEECCC
Confidence 2 467889999999999864
No 353
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.02 E-value=0.039 Score=48.56 Aligned_cols=75 Identities=23% Similarity=0.426 Sum_probs=53.0
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GADA---FLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 248 (359)
.++++||.|+ |++|..+++.+...|++|+++++++++.+.+.+++ +... ..|-.+.+.+..+ .+.+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999986 99999999999999999999999987765553333 3221 1344444433332 2479
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++.+.|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999974
No 354
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.01 E-value=0.055 Score=48.30 Aligned_cols=76 Identities=24% Similarity=0.319 Sum_probs=54.7
Q ss_pred CCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC---Cc------EEecCCCHHHHHHh-------
Q 018246 182 EPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLG---AD------AFLVSSDPAKVKAA------- 244 (359)
Q Consensus 182 ~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g---~~------~v~~~~~~~~~~~~------- 244 (359)
-.|+++||.|+ .++|.+++..+...|++|+++++++++.+...+.+. .. .+.|..+.+.+..+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 46788999986 899999999999999999999999998766644322 21 23344433322222
Q ss_pred -cCCccEEEECCCC
Q 018246 245 -MGTMDYIIDTVSA 257 (359)
Q Consensus 245 -~~~~d~vid~~g~ 257 (359)
.++.|+.+++.|.
T Consensus 86 ~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 86 FFGKIDILVNNAGA 99 (270)
T ss_pred hCCCCCEEEEcCCc
Confidence 3579999998874
No 355
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.01 E-value=0.055 Score=47.91 Aligned_cols=98 Identities=20% Similarity=0.315 Sum_probs=63.5
Q ss_pred CCCEEEEECCc---hHHHHHHHHHHHCCCeEEEEeCChhh---HHHHHHHcCCcEE--ecCCCHHHHHHh-------cCC
Q 018246 183 PGKHLGVAGLG---GLGHVAVKIGKAFGLKVTVISTSPKK---ESEAISKLGADAF--LVSSDPAKVKAA-------MGT 247 (359)
Q Consensus 183 ~g~~VlI~G~g---~vG~~a~~la~~~g~~V~~v~~~~~~---~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~~ 247 (359)
.|+++||.|++ ++|.++++.+...|++|++++++++. .+.+.++++.... .|-.+.+.+.++ .+.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 57899999863 89999999999999999999887543 3333344443222 344444333322 247
Q ss_pred ccEEEECCCChh-----------------------------hHHHHHhccccCCEEEEecCC
Q 018246 248 MDYIIDTVSAVH-----------------------------SLAPLLGLLKVNGKLVTVGLP 280 (359)
Q Consensus 248 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (359)
+|++++++|... ..+.++..|+.+|+++.++..
T Consensus 89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~ 150 (258)
T PRK07533 89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYY 150 (258)
T ss_pred CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecc
Confidence 899999887310 123355566667898887653
No 356
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=96.01 E-value=0.1 Score=46.65 Aligned_cols=94 Identities=21% Similarity=0.156 Sum_probs=59.1
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCC---------cEEecCCCHHHHHHhcCCccEEE
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGA---------DAFLVSSDPAKVKAAMGTMDYII 252 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~---------~~v~~~~~~~~~~~~~~~~d~vi 252 (359)
..++||++|+|. |..+..++++... +|++++.+++-.+.+.+.+.. -.++..+....+.+..+.+|+|+
T Consensus 72 ~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~~~~yDvIi 150 (270)
T TIGR00417 72 NPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADTENTFDVII 150 (270)
T ss_pred CCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhCCCCccEEE
Confidence 345999998765 4455566666644 899999988776666433321 11222222234444445899997
Q ss_pred ECCC----------ChhhHHHHHhccccCCEEEEe
Q 018246 253 DTVS----------AVHSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 253 d~~g----------~~~~~~~~~~~l~~~G~~v~~ 277 (359)
-... ....++.+.+.|+++|.++..
T Consensus 151 ~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~ 185 (270)
T TIGR00417 151 VDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQ 185 (270)
T ss_pred EeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEc
Confidence 5332 123357888999999999876
No 357
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.01 E-value=0.042 Score=49.03 Aligned_cols=77 Identities=25% Similarity=0.248 Sum_probs=56.5
Q ss_pred CCCCEEEEEC-CchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEe-------cCCCHH----HHHHhc---
Q 018246 182 EPGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD-AFL-------VSSDPA----KVKAAM--- 245 (359)
Q Consensus 182 ~~g~~VlI~G-~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~-~v~-------~~~~~~----~~~~~~--- 245 (359)
++...|+|.| +.++|++.+..++..|+.|.++.|+.+++..+.+.+... .+. |-.+.+ .++++.
T Consensus 31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~ 110 (331)
T KOG1210|consen 31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE 110 (331)
T ss_pred CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence 5557888886 599999999999999999999999999999997777732 111 111111 122222
Q ss_pred CCccEEEECCCCh
Q 018246 246 GTMDYIIDTVSAV 258 (359)
Q Consensus 246 ~~~d~vid~~g~~ 258 (359)
+.+|..|.|.|..
T Consensus 111 ~~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 111 GPIDNLFCCAGVA 123 (331)
T ss_pred CCcceEEEecCcc
Confidence 4789999999964
No 358
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.13 Score=46.47 Aligned_cols=99 Identities=20% Similarity=0.258 Sum_probs=62.3
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhh-HHHH---HHHcCCcE---EecCCCHHHHHHh-------cCC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKK-ESEA---ISKLGADA---FLVSSDPAKVKAA-------MGT 247 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~-~~~~---~~~~g~~~---v~~~~~~~~~~~~-------~~~ 247 (359)
.+.++||.|+ |.+|...+..+...|++|++++++.++ .+.. .+..+... ..|..+.+.+.++ .+.
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~ 124 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR 124 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5688999986 999999999888899999999887532 2222 12234321 2344444333322 247
Q ss_pred ccEEEECCCChh--------------------------hHHHHHhccccCCEEEEecCCC
Q 018246 248 MDYIIDTVSAVH--------------------------SLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 248 ~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+|++|.++|... ....+...+++.|+++.++...
T Consensus 125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~ 184 (290)
T PRK06701 125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSIT 184 (290)
T ss_pred CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 899999887420 1122344556678999887543
No 359
>PRK14982 acyl-ACP reductase; Provisional
Probab=95.99 E-value=0.034 Score=51.07 Aligned_cols=94 Identities=16% Similarity=0.247 Sum_probs=66.1
Q ss_pred CCCCEEEEECC-chHHHHHHHHHH-HCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCCh
Q 018246 182 EPGKHLGVAGL-GGLGHVAVKIGK-AFGL-KVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAV 258 (359)
Q Consensus 182 ~~g~~VlI~G~-g~vG~~a~~la~-~~g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 258 (359)
-.+++|+|+|+ |.+|..+++.+. +.|. +++++.+++++...+.++++...+ ..+.+.....|+|+.+++..
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i------~~l~~~l~~aDiVv~~ts~~ 226 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI------LSLEEALPEADIVVWVASMP 226 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH------HhHHHHHccCCEEEECCcCC
Confidence 36789999998 999999888886 4565 899999998888887666542222 12344556899999999875
Q ss_pred hhHHHHHhccccCCEEEEecCCC
Q 018246 259 HSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 259 ~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
..+..-...+++.-.+++++.+.
T Consensus 227 ~~~~I~~~~l~~~~~viDiAvPR 249 (340)
T PRK14982 227 KGVEIDPETLKKPCLMIDGGYPK 249 (340)
T ss_pred cCCcCCHHHhCCCeEEEEecCCC
Confidence 42212224557777788887664
No 360
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.98 E-value=0.054 Score=48.40 Aligned_cols=74 Identities=20% Similarity=0.319 Sum_probs=50.8
Q ss_pred CCCEEEEECC---chHHHHHHHHHHHCCCeEEEEeCCh---hhHHHHHHHcCCc--EEecCCCHHHHHHh-------cCC
Q 018246 183 PGKHLGVAGL---GGLGHVAVKIGKAFGLKVTVISTSP---KKESEAISKLGAD--AFLVSSDPAKVKAA-------MGT 247 (359)
Q Consensus 183 ~g~~VlI~G~---g~vG~~a~~la~~~g~~V~~v~~~~---~~~~~~~~~~g~~--~v~~~~~~~~~~~~-------~~~ 247 (359)
.++++||.|+ +++|++.++.+...|++|+++.+++ ++.+.+.++++.. ...|-.+.+.+.++ .+.
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 88 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGK 88 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 5688999986 5899999999999999999887763 3444454455532 22344444333332 247
Q ss_pred ccEEEECCC
Q 018246 248 MDYIIDTVS 256 (359)
Q Consensus 248 ~d~vid~~g 256 (359)
+|++++++|
T Consensus 89 iD~lv~nAG 97 (272)
T PRK08159 89 LDFVVHAIG 97 (272)
T ss_pred CcEEEECCc
Confidence 899999886
No 361
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.98 E-value=0.043 Score=45.14 Aligned_cols=92 Identities=22% Similarity=0.288 Sum_probs=63.2
Q ss_pred EEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cEEecCCCHHHHHHhcCCccEEEECCCCh----
Q 018246 186 HLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGA--DAFLVSSDPAKVKAAMGTMDYIIDTVSAV---- 258 (359)
Q Consensus 186 ~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~~~d~vid~~g~~---- 258 (359)
+|.|+|+ |-+|...++=|...|..|++++|++++.... +..-+ ..+++ .+.+.....++|+||++.+..
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-~~~~i~q~Difd---~~~~a~~l~g~DaVIsA~~~~~~~~ 77 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-QGVTILQKDIFD---LTSLASDLAGHDAVISAFGAGASDN 77 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-ccceeecccccC---hhhhHhhhcCCceEEEeccCCCCCh
Confidence 4778886 9999999999999999999999999886443 11110 11221 233345556999999998764
Q ss_pred -----hhHHHHHhccccCC--EEEEecCCC
Q 018246 259 -----HSLAPLLGLLKVNG--KLVTVGLPE 281 (359)
Q Consensus 259 -----~~~~~~~~~l~~~G--~~v~~g~~~ 281 (359)
...+.++..|+..| |++.+|...
T Consensus 78 ~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 78 DELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred hHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 12344677777744 788887644
No 362
>PRK01581 speE spermidine synthase; Validated
Probab=95.97 E-value=0.12 Score=47.83 Aligned_cols=94 Identities=16% Similarity=0.112 Sum_probs=61.9
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcC-----------C--cEEecCCCHHHHHHhcCCc
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLG-----------A--DAFLVSSDPAKVKAAMGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g-----------~--~~v~~~~~~~~~~~~~~~~ 248 (359)
..++|||+|+| .|.++..++++.+. +|++++.+++-.+.+ +++. . -.++..+..+++....+.|
T Consensus 150 ~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelA-r~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~~~~~Y 227 (374)
T PRK01581 150 DPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMA-RNVPELVSLNKSAFFDNRVNVHVCDAKEFLSSPSSLY 227 (374)
T ss_pred CCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHH-HhccccchhccccCCCCceEEEECcHHHHHHhcCCCc
Confidence 34689999865 45677777877655 999999999888777 4321 0 1122222234454444589
Q ss_pred cEEEECCCC-----------hhhHHHHHhccccCCEEEEec
Q 018246 249 DYIIDTVSA-----------VHSLAPLLGLLKVNGKLVTVG 278 (359)
Q Consensus 249 d~vid~~g~-----------~~~~~~~~~~l~~~G~~v~~g 278 (359)
|+||--... ...+..+.+.|+|+|.++.-.
T Consensus 228 DVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs 268 (374)
T PRK01581 228 DVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS 268 (374)
T ss_pred cEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 999754322 124678899999999987764
No 363
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.97 E-value=0.053 Score=47.83 Aligned_cols=98 Identities=17% Similarity=0.195 Sum_probs=62.8
Q ss_pred CCCEEEEECC---chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC-c---EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL---GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGA-D---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~---g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~-~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
.|+++||.|+ +++|.++++.+...|++|+++++++ +.+...+++.. . ...|-.+.+.+.++ .+.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 5788999986 4999999999999999999998874 33333244321 1 12344444333322 2479
Q ss_pred cEEEECCCChh-----------------------------hHHHHHhccccCCEEEEecCCC
Q 018246 249 DYIIDTVSAVH-----------------------------SLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 249 d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
|++++++|... ....++..|+.+|+++.++...
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 146 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFG 146 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccC
Confidence 99999887310 1123455666779998886543
No 364
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.95 E-value=0.063 Score=45.52 Aligned_cols=93 Identities=19% Similarity=0.189 Sum_probs=58.0
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCcEEec-CCCHHHHHHhcCCccEEEECCCC
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS---KLGADAFLV-SSDPAKVKAAMGTMDYIIDTVSA 257 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~---~~g~~~v~~-~~~~~~~~~~~~~~d~vid~~g~ 257 (359)
.++.+||-+|+|. |..+..+|+. |.+|++++.+++..+.+.+ ..+...+-. ..+.... ...+.||+|+.+..-
T Consensus 29 ~~~~~vLDiGcG~-G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I~~~~~~ 105 (197)
T PRK11207 29 VKPGKTLDLGCGN-GRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNL-TFDGEYDFILSTVVL 105 (197)
T ss_pred CCCCcEEEECCCC-CHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhC-CcCCCcCEEEEecch
Confidence 4667899998865 6677777764 8899999999986665522 223221110 0111100 123469999875431
Q ss_pred --------hhhHHHHHhccccCCEEEEe
Q 018246 258 --------VHSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 258 --------~~~~~~~~~~l~~~G~~v~~ 277 (359)
...+..+.+.|+|+|.++.+
T Consensus 106 ~~~~~~~~~~~l~~i~~~LkpgG~~~~~ 133 (197)
T PRK11207 106 MFLEAKTIPGLIANMQRCTKPGGYNLIV 133 (197)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 13467888899999996554
No 365
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.94 E-value=0.073 Score=47.49 Aligned_cols=96 Identities=17% Similarity=0.230 Sum_probs=73.1
Q ss_pred ccccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 018246 162 APLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK 240 (359)
Q Consensus 162 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (359)
...||+....+..++...---.|++|+|+|- ..+|.-.+.++...|+.|++..+....
T Consensus 142 ~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~--------------------- 200 (287)
T PRK14176 142 GLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDD--------------------- 200 (287)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCC---------------------
Confidence 3567776666777776654358999999996 569999999999999999887743221
Q ss_pred HHHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCC
Q 018246 241 VKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLP 280 (359)
Q Consensus 241 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (359)
+.+.+...|+++.++|.+..+. -..++++..++++|..
T Consensus 201 l~~~~~~ADIvv~AvG~p~~i~--~~~vk~gavVIDvGin 238 (287)
T PRK14176 201 LKKYTLDADILVVATGVKHLIK--ADMVKEGAVIFDVGIT 238 (287)
T ss_pred HHHHHhhCCEEEEccCCccccC--HHHcCCCcEEEEeccc
Confidence 2334456899999999887443 4589999999999975
No 366
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.94 E-value=0.061 Score=46.62 Aligned_cols=82 Identities=17% Similarity=0.257 Sum_probs=62.1
Q ss_pred EEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH-HcCCcEE-ecCCCHHHHHHhc-CCccEEEECCCChhhHH
Q 018246 186 HLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS-KLGADAF-LVSSDPAKVKAAM-GTMDYIIDTVSAVHSLA 262 (359)
Q Consensus 186 ~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~-~~g~~~v-~~~~~~~~~~~~~-~~~d~vid~~g~~~~~~ 262 (359)
+++|.|+|.+|...++.+...|..|+++++++++.++... ++....+ .+..+.+.+.++. ..+|+++-+++... .+
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~-~N 80 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE-VN 80 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH-HH
Confidence 5889999999999999999999999999999999877423 3554333 3455566677764 58999999999865 44
Q ss_pred HHHhcc
Q 018246 263 PLLGLL 268 (359)
Q Consensus 263 ~~~~~l 268 (359)
..+-.+
T Consensus 81 ~i~~~l 86 (225)
T COG0569 81 SVLALL 86 (225)
T ss_pred HHHHHH
Confidence 433333
No 367
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.93 E-value=0.046 Score=47.81 Aligned_cols=75 Identities=23% Similarity=0.302 Sum_probs=51.2
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCc-E--EecCCCHHHHHHhc-------CCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS---KLGAD-A--FLVSSDPAKVKAAM-------GTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~-------~~~ 248 (359)
.+.++||+|+ |.+|...+..+...|++|++++|++++...+.+ ..+.+ . ..|..+.+.+.++. +.+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999986 999999999888889999999999765544322 22322 1 12444444333332 378
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++.+.+.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999998864
No 368
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.93 E-value=0.049 Score=46.72 Aligned_cols=34 Identities=24% Similarity=0.419 Sum_probs=30.1
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCC
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTS 216 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~ 216 (359)
...+|+|+|+|++|..+++.+...|. +++++|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 44679999999999999999999999 79998876
No 369
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.92 E-value=0.039 Score=50.66 Aligned_cols=44 Identities=20% Similarity=0.251 Sum_probs=37.7
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK 226 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~ 226 (359)
.|++++|.|+ |++|.+.+..+...|++|++++|++++++.+.++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~ 96 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDS 96 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
Confidence 5889999987 9999998888888899999999999887765443
No 370
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.92 E-value=0.075 Score=46.84 Aligned_cols=74 Identities=22% Similarity=0.268 Sum_probs=50.2
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCc-EEecCCCHHHHHHh-------cCCccEEE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPK-KESEAISKLGAD-AFLVSSDPAKVKAA-------MGTMDYII 252 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~-~~~~~~~~~g~~-~v~~~~~~~~~~~~-------~~~~d~vi 252 (359)
.+++++|.|+ |++|...++.+...|++|+++.+..+ ..+.+ ++.+.. ...|-.+.+.+.++ .+++|+++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKEL-REKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH-HhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4678999986 99999999999999999988765543 33334 333432 22355555443332 24789999
Q ss_pred ECCCC
Q 018246 253 DTVSA 257 (359)
Q Consensus 253 d~~g~ 257 (359)
.+.|.
T Consensus 85 ~~ag~ 89 (255)
T PRK06463 85 NNAGI 89 (255)
T ss_pred ECCCc
Confidence 98874
No 371
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=95.92 E-value=0.092 Score=47.59 Aligned_cols=89 Identities=21% Similarity=0.195 Sum_probs=65.1
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChh--
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVH-- 259 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 259 (359)
-.|++|.|+|-|.+|.+.++.++..|.+|++..+.....+.+ +..|+.. . .+.++....|+|+-++..+.
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A-~~~G~~v-~------sl~Eaak~ADVV~llLPd~~t~ 85 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVA-KADGFEV-M------SVSEAVRTAQVVQMLLPDEQQA 85 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcchhhHHH-HHcCCEE-C------CHHHHHhcCCEEEEeCCChHHH
Confidence 368899999999999999999999999999987654444444 5566632 1 24456667899998887543
Q ss_pred -hH-HHHHhccccCCEEEEec
Q 018246 260 -SL-APLLGLLKVNGKLVTVG 278 (359)
Q Consensus 260 -~~-~~~~~~l~~~G~~v~~g 278 (359)
.+ ...+..|+++..+++..
T Consensus 86 ~V~~~eil~~MK~GaiL~f~h 106 (335)
T PRK13403 86 HVYKAEVEENLREGQMLLFSH 106 (335)
T ss_pred HHHHHHHHhcCCCCCEEEECC
Confidence 23 35677888888776653
No 372
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.046 Score=47.69 Aligned_cols=76 Identities=14% Similarity=0.240 Sum_probs=53.0
Q ss_pred CCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc---EEecCCCHHHHHHh-------cCC
Q 018246 182 EPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK---LGAD---AFLVSSDPAKVKAA-------MGT 247 (359)
Q Consensus 182 ~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~-------~~~ 247 (359)
..+++++|.|+ |.+|..++..+...|.+|+++++++++.+.+.++ .+.. ...|-.+.+.+..+ .+.
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 34578999986 9999999999999999999999998776555332 2221 22344444433222 246
Q ss_pred ccEEEECCCC
Q 018246 248 MDYIIDTVSA 257 (359)
Q Consensus 248 ~d~vid~~g~ 257 (359)
+|+++.+.|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 373
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.053 Score=47.80 Aligned_cols=74 Identities=23% Similarity=0.281 Sum_probs=53.1
Q ss_pred CCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC---Cc-EEecCCCHHHHHHhc-------CCccEE
Q 018246 184 GKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLG---AD-AFLVSSDPAKVKAAM-------GTMDYI 251 (359)
Q Consensus 184 g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g---~~-~v~~~~~~~~~~~~~-------~~~d~v 251 (359)
++++||.|+ |.+|...+..+...|++|+++++++++.+.+.+.+. +. ...|..+.+.+..+. +++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467999986 999999999888899999999999888766645443 11 123445544433222 368999
Q ss_pred EECCCC
Q 018246 252 IDTVSA 257 (359)
Q Consensus 252 id~~g~ 257 (359)
+.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999874
No 374
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=95.91 E-value=0.062 Score=49.39 Aligned_cols=75 Identities=19% Similarity=0.202 Sum_probs=52.7
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHHcCC---cE-EecCCCHHHHHHhcCCccEEEECC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFG--LKVTVISTSPKKESEAISKLGA---DA-FLVSSDPAKVKAAMGTMDYIIDTV 255 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g--~~V~~v~~~~~~~~~~~~~~g~---~~-v~~~~~~~~~~~~~~~~d~vid~~ 255 (359)
.|.+|||.|+ |.+|...++.+...| .+|++++++..+...+.+.+.. .. ..|..+.+.+.++..++|+||.++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 3678999986 999999888877765 5899998876654444233321 11 235566666666667899999988
Q ss_pred CC
Q 018246 256 SA 257 (359)
Q Consensus 256 g~ 257 (359)
+.
T Consensus 83 g~ 84 (324)
T TIGR03589 83 AL 84 (324)
T ss_pred cc
Confidence 74
No 375
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=95.90 E-value=0.11 Score=48.30 Aligned_cols=93 Identities=14% Similarity=0.302 Sum_probs=68.2
Q ss_pred CEEEEECC-chHHHHHHHHHHHC--CCeEEEEe--CChhhHHHHHHHcCCcEEecCCCH--HHHH---------------
Q 018246 185 KHLGVAGL-GGLGHVAVKIGKAF--GLKVTVIS--TSPKKESEAISKLGADAFLVSSDP--AKVK--------------- 242 (359)
Q Consensus 185 ~~VlI~G~-g~vG~~a~~la~~~--g~~V~~v~--~~~~~~~~~~~~~g~~~v~~~~~~--~~~~--------------- 242 (359)
++|.|+|+ |.+|..++.+.++. ..+|++++ ++.+++...+++|+...++-.++. ..++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~ 81 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE 81 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence 47899995 99999999998876 45777764 677788888899998876544332 1121
Q ss_pred ---Hhc--CCccEEEECCCChhhHHHHHhccccCCEEEEe
Q 018246 243 ---AAM--GTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 243 ---~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 277 (359)
++. ..+|+|+.+.++...+...+.+++.|-++.+.
T Consensus 82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA 121 (385)
T PRK05447 82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALA 121 (385)
T ss_pred HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence 111 25999999988765588889999888777664
No 376
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.90 E-value=0.055 Score=47.67 Aligned_cols=75 Identities=25% Similarity=0.314 Sum_probs=52.6
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCc---EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS---KLGAD---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
.+.+++|.|+ |.+|...+..+...|++|+++++++++.+.+.+ +.+.. ...|..+.+.+..+ .+.+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999986 999999999888899999999999876555433 33421 12344554333322 2468
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++.+.|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999998884
No 377
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=95.88 E-value=0.046 Score=50.76 Aligned_cols=75 Identities=21% Similarity=0.215 Sum_probs=52.1
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC----Cc-EEecCCCHHHHHHhcC--CccEEEEC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLG----AD-AFLVSSDPAKVKAAMG--TMDYIIDT 254 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g----~~-~v~~~~~~~~~~~~~~--~~d~vid~ 254 (359)
.|.+|||.|+ |.+|..+++.+...|.+|+++++++.......+.++ .. ...|..+.+.+.++.. ++|+|+.+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 3678999986 999999999999999999999987765433212222 11 2234455555555543 58999998
Q ss_pred CCC
Q 018246 255 VSA 257 (359)
Q Consensus 255 ~g~ 257 (359)
++.
T Consensus 83 A~~ 85 (349)
T TIGR02622 83 AAQ 85 (349)
T ss_pred Ccc
Confidence 873
No 378
>PRK04148 hypothetical protein; Provisional
Probab=95.88 E-value=0.051 Score=42.63 Aligned_cols=84 Identities=23% Similarity=0.180 Sum_probs=55.7
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhhH
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSL 261 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 261 (359)
.++.+++++|.| .|...+..+...|.+|++++.+++..+.+ ++.+...+.+.-- +.-..+.+++|+++..-......
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a-~~~~~~~v~dDlf-~p~~~~y~~a~liysirpp~el~ 91 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKA-KKLGLNAFVDDLF-NPNLEIYKNAKLIYSIRPPRDLQ 91 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHH-HHhCCeEEECcCC-CCCHHHHhcCCEEEEeCCCHHHH
Confidence 456789999999 88755656667899999999999998888 6677654442110 00112335788888877776633
Q ss_pred HHHHhcc
Q 018246 262 APLLGLL 268 (359)
Q Consensus 262 ~~~~~~l 268 (359)
..+++.-
T Consensus 92 ~~~~~la 98 (134)
T PRK04148 92 PFILELA 98 (134)
T ss_pred HHHHHHH
Confidence 3333333
No 379
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.063 Score=46.75 Aligned_cols=43 Identities=28% Similarity=0.336 Sum_probs=36.6
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS 225 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~ 225 (359)
++++++|+|+ |++|...++.+...|++|+++++++++.+.+.+
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~ 48 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYD 48 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH
Confidence 4678999986 999999999999899999999999987665533
No 380
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=95.87 E-value=0.058 Score=50.09 Aligned_cols=86 Identities=12% Similarity=0.081 Sum_probs=56.8
Q ss_pred hhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHH----HHHHHcC------CcEE-ecCCC
Q 018246 170 TVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKES----EAISKLG------ADAF-LVSSD 237 (359)
Q Consensus 170 ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~----~~~~~~g------~~~v-~~~~~ 237 (359)
|||.-++.... -++.+|||.|+ |-+|..++..+...|.+|+++++...... .+....+ ...+ .|..+
T Consensus 2 ~~~~~~~~~~~-~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d 80 (348)
T PRK15181 2 TAYEELRTKLV-LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK 80 (348)
T ss_pred chhhhhhhccc-ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC
Confidence 56665554444 35578999986 99999999999999999999987543221 1111111 1112 24455
Q ss_pred HHHHHHhcCCccEEEECCC
Q 018246 238 PAKVKAAMGTMDYIIDTVS 256 (359)
Q Consensus 238 ~~~~~~~~~~~d~vid~~g 256 (359)
.+.+..+..++|+||.+++
T Consensus 81 ~~~l~~~~~~~d~ViHlAa 99 (348)
T PRK15181 81 FTDCQKACKNVDYVLHQAA 99 (348)
T ss_pred HHHHHHHhhCCCEEEECcc
Confidence 5556666668999999876
No 381
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.048 Score=48.14 Aligned_cols=76 Identities=16% Similarity=0.180 Sum_probs=49.9
Q ss_pred CCCCEEEEECC-chHHHHHHHHHHHC-CCeEEEEeCChhh-HHHHHHH---cCC-c-EE--ecCCCHHH----HHHhc--
Q 018246 182 EPGKHLGVAGL-GGLGHVAVKIGKAF-GLKVTVISTSPKK-ESEAISK---LGA-D-AF--LVSSDPAK----VKAAM-- 245 (359)
Q Consensus 182 ~~g~~VlI~G~-g~vG~~a~~la~~~-g~~V~~v~~~~~~-~~~~~~~---~g~-~-~v--~~~~~~~~----~~~~~-- 245 (359)
..+.+|||.|+ |++|...++-+.+. |++|++++|++++ ++.+.++ .+. + ++ .|..+.+. ++++.
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 85 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG 85 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence 46778999986 99999999877666 4899999998875 4444333 232 1 22 34444332 22222
Q ss_pred CCccEEEECCCC
Q 018246 246 GTMDYIIDTVSA 257 (359)
Q Consensus 246 ~~~d~vid~~g~ 257 (359)
++.|+++.+.|.
T Consensus 86 g~id~li~~ag~ 97 (253)
T PRK07904 86 GDVDVAIVAFGL 97 (253)
T ss_pred CCCCEEEEeeec
Confidence 479999887764
No 382
>PRK14967 putative methyltransferase; Provisional
Probab=95.87 E-value=0.08 Score=45.83 Aligned_cols=92 Identities=24% Similarity=0.275 Sum_probs=60.9
Q ss_pred CCCCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHH---HcCCc-EEecCCCHHHHHHh-cCCccEEEEC
Q 018246 181 TEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAIS---KLGAD-AFLVSSDPAKVKAA-MGTMDYIIDT 254 (359)
Q Consensus 181 ~~~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~---~~g~~-~v~~~~~~~~~~~~-~~~~d~vid~ 254 (359)
++++++||-.|+|. |..+..+++. ++ +|++++.+++..+.+.+ ..+.. .+++.+ ....+ ...+|+|+..
T Consensus 34 ~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d---~~~~~~~~~fD~Vi~n 108 (223)
T PRK14967 34 LGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGD---WARAVEFRPFDVVVSN 108 (223)
T ss_pred cCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECc---hhhhccCCCeeEEEEC
Confidence 37889999999987 8888888875 66 99999999987765532 23332 222222 11112 2479999975
Q ss_pred CCCh---------------------------hhHHHHHhccccCCEEEEe
Q 018246 255 VSAV---------------------------HSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 255 ~g~~---------------------------~~~~~~~~~l~~~G~~v~~ 277 (359)
.+.. ..+..+.+.|+++|+++.+
T Consensus 109 pPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~ 158 (223)
T PRK14967 109 PPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV 158 (223)
T ss_pred CCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 3211 1245678899999998865
No 383
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.85 E-value=0.06 Score=45.74 Aligned_cols=34 Identities=24% Similarity=0.401 Sum_probs=30.3
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCC
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTS 216 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~ 216 (359)
...+|+|+|+|++|..+++.+...|. +++++|.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34679999999999999999999999 79999977
No 384
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.056 Score=47.32 Aligned_cols=73 Identities=22% Similarity=0.287 Sum_probs=50.9
Q ss_pred CCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-----CCc-E--EecCCCHHHHHHh-------cCC
Q 018246 184 GKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL-----GAD-A--FLVSSDPAKVKAA-------MGT 247 (359)
Q Consensus 184 g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~-------~~~ 247 (359)
++++||.|+ |++|...++.+...|++|+++++++++.+.+...+ +.. + ..|..+.+.+.++ .++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467999986 99999988888888999999999988766553322 211 1 2355554333222 247
Q ss_pred ccEEEECCC
Q 018246 248 MDYIIDTVS 256 (359)
Q Consensus 248 ~d~vid~~g 256 (359)
.|+++.+.|
T Consensus 82 id~vi~~ag 90 (248)
T PRK08251 82 LDRVIVNAG 90 (248)
T ss_pred CCEEEECCC
Confidence 999999887
No 385
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.85 E-value=0.063 Score=47.64 Aligned_cols=75 Identities=9% Similarity=0.182 Sum_probs=49.3
Q ss_pred CCCEEEEECC---chHHHHHHHHHHHCCCeEEEEeCCh---hhHHHHHHHcCCc--EEecCCCHHHHHHh-------cCC
Q 018246 183 PGKHLGVAGL---GGLGHVAVKIGKAFGLKVTVISTSP---KKESEAISKLGAD--AFLVSSDPAKVKAA-------MGT 247 (359)
Q Consensus 183 ~g~~VlI~G~---g~vG~~a~~la~~~g~~V~~v~~~~---~~~~~~~~~~g~~--~v~~~~~~~~~~~~-------~~~ 247 (359)
.++++||.|+ +++|++.++.+...|++|+++.+.+ ++.+.+.++.+.. ...|-.+.+.+.++ .++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999983 5899999999999999999886653 2333332333422 22355554433332 247
Q ss_pred ccEEEECCCC
Q 018246 248 MDYIIDTVSA 257 (359)
Q Consensus 248 ~d~vid~~g~ 257 (359)
+|++++++|.
T Consensus 85 iD~lVnnAG~ 94 (261)
T PRK08690 85 LDGLVHSIGF 94 (261)
T ss_pred CcEEEECCcc
Confidence 9999999864
No 386
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=95.83 E-value=0.087 Score=47.32 Aligned_cols=88 Identities=20% Similarity=0.182 Sum_probs=59.7
Q ss_pred EEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhh---HH
Q 018246 186 HLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHS---LA 262 (359)
Q Consensus 186 ~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~---~~ 262 (359)
+|.|+|.|.+|...+..++..|.+|+++++++++.+.+ .+.|..... ..+. +.....|+||.|+..... +.
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a-~~~g~~~~~-~~~~----~~~~~aDlVilavp~~~~~~~~~ 75 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERA-IERGLVDEA-STDL----SLLKDCDLVILALPIGLLLPPSE 75 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHCCCcccc-cCCH----hHhcCCCEEEEcCCHHHHHHHHH
Confidence 58899999999998888888899999999999888877 555632111 1111 123578999999986552 23
Q ss_pred HHHhccccCCEEEEecC
Q 018246 263 PLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 263 ~~~~~l~~~G~~v~~g~ 279 (359)
.....++++..+.+++.
T Consensus 76 ~l~~~l~~~~ii~d~~S 92 (279)
T PRK07417 76 QLIPALPPEAIVTDVGS 92 (279)
T ss_pred HHHHhCCCCcEEEeCcc
Confidence 33344555555555554
No 387
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.046 Score=48.60 Aligned_cols=71 Identities=25% Similarity=0.352 Sum_probs=50.4
Q ss_pred CCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHHh-------cCCccEEEEC
Q 018246 184 GKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD-AFLVSSDPAKVKAA-------MGTMDYIIDT 254 (359)
Q Consensus 184 g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~-------~~~~d~vid~ 254 (359)
+++++|.|+ |.+|...++.+...|++|+++++++++.+.. .+.. ...|..+.+.+.++ .+.+|++|.+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 467999986 9999999999888999999999987654322 1222 23455555444333 2478999999
Q ss_pred CCC
Q 018246 255 VSA 257 (359)
Q Consensus 255 ~g~ 257 (359)
.|.
T Consensus 81 ag~ 83 (270)
T PRK06179 81 AGV 83 (270)
T ss_pred CCC
Confidence 985
No 388
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.2 Score=43.61 Aligned_cols=98 Identities=19% Similarity=0.257 Sum_probs=62.0
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhh-HHHHH---HHcCCc-E--EecCCCHHHHHHh-------cCC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKK-ESEAI---SKLGAD-A--FLVSSDPAKVKAA-------MGT 247 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~-~~~~~---~~~g~~-~--v~~~~~~~~~~~~-------~~~ 247 (359)
++.++||.|+ |++|...++.+...|++|+++.++.+. .+... ++.+.. . ..|..+.+.+.+. .++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5678999986 999999999999999998887765432 22221 233422 1 2244444333332 247
Q ss_pred ccEEEECCCCh-------------------------hhHHHHHhccccCCEEEEecCC
Q 018246 248 MDYIIDTVSAV-------------------------HSLAPLLGLLKVNGKLVTVGLP 280 (359)
Q Consensus 248 ~d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~ 280 (359)
+|+++.+.|.. ..+..+++.++..|+++.++..
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (245)
T PRK12937 84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTS 141 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeec
Confidence 99999988741 0123344556677899988653
No 389
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=95.82 E-value=0.12 Score=46.25 Aligned_cols=92 Identities=18% Similarity=0.225 Sum_probs=63.5
Q ss_pred CEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCc---------EEecCCCHHHHHHhcCCccEEE-E
Q 018246 185 KHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGAD---------AFLVSSDPAKVKAAMGTMDYII-D 253 (359)
Q Consensus 185 ~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~---------~v~~~~~~~~~~~~~~~~d~vi-d 253 (359)
++|||+|.|. |-.+-.++++... +++++.-+++=.+.+.+-++.. .++-.+...+++.....+|++| |
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~~fDvIi~D 156 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEEKFDVIIVD 156 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCCcCCEEEEc
Confidence 5899987543 4456677787766 9999999888777775555522 1222222345555556899997 5
Q ss_pred CCCC---------hhhHHHHHhccccCCEEEEe
Q 018246 254 TVSA---------VHSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 254 ~~g~---------~~~~~~~~~~l~~~G~~v~~ 277 (359)
+... ...++.+.++|+++|.++.-
T Consensus 157 ~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q 189 (282)
T COG0421 157 STDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ 189 (282)
T ss_pred CCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence 4433 34578999999999999876
No 390
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.81 E-value=0.076 Score=47.11 Aligned_cols=75 Identities=19% Similarity=0.292 Sum_probs=53.1
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc---EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK---LGAD---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
.+.+++|.|+ +++|..++..+...|++|+++++++++.+.+.+. .+.+ ...|-.+.+.+.++ .+.+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5678999986 9999999888888999999999998776555333 3432 22355554433332 2468
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++.+.|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999874
No 391
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=95.81 E-value=0.69 Score=41.76 Aligned_cols=169 Identities=14% Similarity=0.133 Sum_probs=87.2
Q ss_pred CEEEEECCchHHHHHH-HHHHHCCCeEEEEe-CChh--hHHHHHHHcCCcEEecCCCHHHHHHh--cCCccEEEECCCCh
Q 018246 185 KHLGVAGLGGLGHVAV-KIGKAFGLKVTVIS-TSPK--KESEAISKLGADAFLVSSDPAKVKAA--MGTMDYIIDTVSAV 258 (359)
Q Consensus 185 ~~VlI~G~g~vG~~a~-~la~~~g~~V~~v~-~~~~--~~~~~~~~~g~~~v~~~~~~~~~~~~--~~~~d~vid~~g~~ 258 (359)
-+|.|+|.|.+|...+ .+.+.-+.++.++. .+++ .++.+ +++|..... .+.+.+.+. ..++|+||++++..
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A-~~~Gi~~~~--~~ie~LL~~~~~~dIDiVf~AT~a~ 81 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARA-RRLGVATSA--EGIDGLLAMPEFDDIDIVFDATSAG 81 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHH-HHcCCCccc--CCHHHHHhCcCCCCCCEEEECCCHH
Confidence 3689999999998744 44444466766654 4443 23444 678854432 222333222 14799999999987
Q ss_pred hhHHHHHhccccCCEEEEecCCC-CCe---eeCHHHHHh-cCcEEEEeecCCHHHHHHHHHHHHhCCCcccE--------
Q 018246 259 HSLAPLLGLLKVNGKLVTVGLPE-KPL---EVPIFALVG-ARRLVGGSNVGGMKETQEMLDFCAKHNIAADI-------- 325 (359)
Q Consensus 259 ~~~~~~~~~l~~~G~~v~~g~~~-~~~---~~~~~~~~~-k~~~i~g~~~~~~~~~~~~~~~l~~g~i~~~~-------- 325 (359)
.-.+.+..+++.|-.+++..... .++ ..+...... ++..+.....-..-.+-..+.-+.++.+...+
T Consensus 82 ~H~e~a~~a~eaGk~VID~sPA~~~PlvVP~VN~~~~~~~~~~~iia~p~~ati~~v~Al~~v~~~~~~eIvat~~s~s~ 161 (302)
T PRK08300 82 AHVRHAAKLREAGIRAIDLTPAAIGPYCVPAVNLDEHLDAPNVNMVTCGGQATIPIVAAVSRVAPVHYAEIVASIASKSA 161 (302)
T ss_pred HHHHHHHHHHHcCCeEEECCccccCCcccCcCCHHHHhcccCCCEEECccHHHHHHHHHhcccCcCceeeeeeeehhhcc
Confidence 64556666666665555543222 111 234333322 34455544432222222233334444442222
Q ss_pred ---EEEccccHHHHHHHHH---cCCccEEEEEEcCCC
Q 018246 326 ---ELVRMDQINTAMERLA---KSDVKYRFVIDVGNS 356 (359)
Q Consensus 326 ---~~~~l~~~~~a~~~~~---~~~~~gkvvv~~~~~ 356 (359)
.+-.+||+.+--+... .+-..||+++.+++.
T Consensus 162 g~gtr~nidE~~~~t~~~~~~~~g~~~~kai~~~npa 198 (302)
T PRK08300 162 GPGTRANIDEFTETTSRAIEKVGGAARGKAIIILNPA 198 (302)
T ss_pred CCcccccHHHHHHHHHHHHHHhcCcccceEEEEecCC
Confidence 1223455433333222 233459999998874
No 392
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.81 E-value=0.038 Score=45.07 Aligned_cols=73 Identities=27% Similarity=0.427 Sum_probs=48.2
Q ss_pred CEEEEECC-chHHHHHHHHHHHCCC-eEEEEeCC--hhhHHHHHHH---cCCc-EE--ecCCCHHHHHHh-------cCC
Q 018246 185 KHLGVAGL-GGLGHVAVKIGKAFGL-KVTVISTS--PKKESEAISK---LGAD-AF--LVSSDPAKVKAA-------MGT 247 (359)
Q Consensus 185 ~~VlI~G~-g~vG~~a~~la~~~g~-~V~~v~~~--~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~-------~~~ 247 (359)
+++||.|+ +++|+..++.+...|+ +|+++.++ .++.+.+..+ .+.. .+ .|..+.+.++++ .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 36899986 9999999888888877 88888888 4554444333 3432 11 234444333332 248
Q ss_pred ccEEEECCCC
Q 018246 248 MDYIIDTVSA 257 (359)
Q Consensus 248 ~d~vid~~g~ 257 (359)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999998885
No 393
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.076 Score=46.85 Aligned_cols=75 Identities=21% Similarity=0.283 Sum_probs=52.7
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHH---HcCCc---EEecCCCHHHHHHh-------cCC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLK-VTVISTSPKKESEAIS---KLGAD---AFLVSSDPAKVKAA-------MGT 247 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~-V~~v~~~~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~-------~~~ 247 (359)
.+++++|.|+ |++|..+++.+...|++ |+++++++++.+.... ..+.. ...|..+.+.+.++ .++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5678999986 99999999999999997 9999998766553322 33432 22355555433332 247
Q ss_pred ccEEEECCCC
Q 018246 248 MDYIIDTVSA 257 (359)
Q Consensus 248 ~d~vid~~g~ 257 (359)
+|+++.+.+.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 394
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.80 E-value=0.1 Score=46.46 Aligned_cols=96 Identities=18% Similarity=0.216 Sum_probs=73.0
Q ss_pred cccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 018246 163 PLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKV 241 (359)
Q Consensus 163 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 241 (359)
.+||+..+.+..++...---.|++|+|+|- ..+|.=.+.++...|+.|++..+.... +
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~---------------------l 195 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKN---------------------L 195 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 467776666767766654458999999995 899999999999999999887643222 2
Q ss_pred HHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCC
Q 018246 242 KAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 242 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
.+.+...|+++-++|.+..+. -..+++|..++++|...
T Consensus 196 ~~~~~~ADIvIsAvGkp~~i~--~~~ik~gavVIDvGin~ 233 (278)
T PRK14172 196 KEVCKKADILVVAIGRPKFID--EEYVKEGAIVIDVGTSS 233 (278)
T ss_pred HHHHhhCCEEEEcCCCcCccC--HHHcCCCcEEEEeeccc
Confidence 334456899999999988444 45699999999998754
No 395
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.79 E-value=0.079 Score=51.58 Aligned_cols=71 Identities=24% Similarity=0.251 Sum_probs=50.7
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChh-h----HHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCC
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPK-K----ESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVS 256 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~-~----~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g 256 (359)
..+++|+|+|+|.+|+.++.+++..|.+|+++++.+. . .+.+ ++.|.....+.... ...++|+|+.+.|
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l-~~~gv~~~~~~~~~-----~~~~~D~Vv~s~G 87 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAIL-EALGATVRLGPGPT-----LPEDTDLVVTSPG 87 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHH-HHcCCEEEECCCcc-----ccCCCCEEEECCC
Confidence 3567899999999999999999999999999986653 1 1233 56676654433221 2236888988887
Q ss_pred Ch
Q 018246 257 AV 258 (359)
Q Consensus 257 ~~ 258 (359)
..
T Consensus 88 i~ 89 (480)
T PRK01438 88 WR 89 (480)
T ss_pred cC
Confidence 53
No 396
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=95.79 E-value=0.07 Score=46.39 Aligned_cols=70 Identities=23% Similarity=0.369 Sum_probs=54.7
Q ss_pred EEEECC-chHHHHHHHHHHHCCCeEEEEeCChhh--HHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEECCCC
Q 018246 187 LGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKK--ESEAISKLGADAF-LVSSDPAKVKAAMGTMDYIIDTVSA 257 (359)
Q Consensus 187 VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~--~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~d~vid~~g~ 257 (359)
|+|.|+ |.+|...++.+...+.+|.++.|+... ...+ +..|+..+ .|+.+.+.+.+...++|.||.+.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l-~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQL-QALGAEVVEADYDDPESLVAALKGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHH-HHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhh-hcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence 688987 999999999999988899999998743 3444 67787544 3556667788888899999998883
No 397
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.78 E-value=0.068 Score=46.89 Aligned_cols=74 Identities=20% Similarity=0.261 Sum_probs=51.4
Q ss_pred CCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHH-------HHhcCCcc
Q 018246 184 GKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL---GAD---AFLVSSDPAKV-------KAAMGTMD 249 (359)
Q Consensus 184 g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~-------~~~~~~~d 249 (359)
+.++||.|+ |.+|...+..+.+.|++|+++++++++.+.+...+ +.. ...|..+.+.+ .+..++.|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 357999986 99999999998889999999999987766553322 222 12355554422 22234789
Q ss_pred EEEECCCC
Q 018246 250 YIIDTVSA 257 (359)
Q Consensus 250 ~vid~~g~ 257 (359)
++|.+.+.
T Consensus 81 ~vi~~a~~ 88 (255)
T TIGR01963 81 ILVNNAGI 88 (255)
T ss_pred EEEECCCC
Confidence 99988864
No 398
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.78 E-value=0.074 Score=49.97 Aligned_cols=77 Identities=19% Similarity=0.250 Sum_probs=51.9
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCC-------------------hhhHHHHHH---HcCC-cEEecCC--
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTS-------------------PKKESEAIS---KLGA-DAFLVSS-- 236 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~-------------------~~~~~~~~~---~~g~-~~v~~~~-- 236 (359)
.+.+|+|+|+|++|..++..+...|. ++++++.. ..+.+.+.+ ++.. ..+....
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~ 213 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQER 213 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence 45689999999999999999999999 89999876 223333322 2222 2221111
Q ss_pred -CHHHHHHhcCCccEEEECCCChh
Q 018246 237 -DPAKVKAAMGTMDYIIDTVSAVH 259 (359)
Q Consensus 237 -~~~~~~~~~~~~d~vid~~g~~~ 259 (359)
+.+.+..+..++|+|++|+.+..
T Consensus 214 ~~~~~~~~~~~~~D~Vv~~~d~~~ 237 (376)
T PRK08762 214 VTSDNVEALLQDVDVVVDGADNFP 237 (376)
T ss_pred CChHHHHHHHhCCCEEEECCCCHH
Confidence 12334455568999999999865
No 399
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.78 E-value=0.087 Score=46.49 Aligned_cols=74 Identities=20% Similarity=0.289 Sum_probs=50.5
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHH---HHHcCCc---EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEA---ISKLGAD---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~---~~~~g~~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
.++++||.|+ |++|...++.+...|++|++++++ ++.+.+ ..+.+.+ ...|..+.+.+..+ .+.+
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999986 999999999999999999999887 333222 2333432 22344554433332 2478
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++.+.|.
T Consensus 93 d~li~~ag~ 101 (258)
T PRK06935 93 DILVNNAGT 101 (258)
T ss_pred CEEEECCCC
Confidence 999998874
No 400
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.77 E-value=0.064 Score=46.94 Aligned_cols=75 Identities=23% Similarity=0.256 Sum_probs=50.6
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCc---EEecCCCHHHHHHh-------cCCccE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPK-KESEAISKLGAD---AFLVSSDPAKVKAA-------MGTMDY 250 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~-~~~~~~~~~g~~---~v~~~~~~~~~~~~-------~~~~d~ 250 (359)
.++++||.|+ |++|...+..+...|++|+++++++. +.....++.+.. ...|..+.+.+..+ .+++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4788999986 99999999999999999999998753 222222444432 22344554433322 247999
Q ss_pred EEECCCC
Q 018246 251 IIDTVSA 257 (359)
Q Consensus 251 vid~~g~ 257 (359)
++.+.|.
T Consensus 84 li~~ag~ 90 (248)
T TIGR01832 84 LVNNAGI 90 (248)
T ss_pred EEECCCC
Confidence 9998874
No 401
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.088 Score=47.42 Aligned_cols=75 Identities=20% Similarity=0.259 Sum_probs=50.6
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCCh---------hhHHHHHHH---cCCcE---EecCCCHHHHHHh--
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSP---------KKESEAISK---LGADA---FLVSSDPAKVKAA-- 244 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~---------~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-- 244 (359)
.++++||.|+ +++|.+.++.+...|++|++++++. ++.+.+.++ .+... ..|-.+.+.+.++
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~ 84 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD 84 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence 5789999986 9999999999988999999988764 444443333 23321 2344544333222
Q ss_pred -----cCCccEEEECCCC
Q 018246 245 -----MGTMDYIIDTVSA 257 (359)
Q Consensus 245 -----~~~~d~vid~~g~ 257 (359)
.+.+|+++++.|.
T Consensus 85 ~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 85 AAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHhcCCCCEEEECCCC
Confidence 2478999998874
No 402
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.77 E-value=0.069 Score=51.87 Aligned_cols=72 Identities=15% Similarity=0.203 Sum_probs=50.9
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCC
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSA 257 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~ 257 (359)
-.+++|+|+|.|..|++++.+++..|+.|++.++.......+.+++|.......+..+.+ ..+|+|+-+.|-
T Consensus 13 ~~~~~v~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~----~~~d~vV~Spgi 84 (473)
T PRK00141 13 ELSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEASDQL----DSFSLVVTSPGW 84 (473)
T ss_pred ccCCeEEEEccCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCchhHh----cCCCEEEeCCCC
Confidence 356689999999999999999999999999999876554433356676554332222222 357888876654
No 403
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.77 E-value=0.013 Score=56.58 Aligned_cols=92 Identities=16% Similarity=0.173 Sum_probs=58.3
Q ss_pred CCCCCCCEEE----EEC-CchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHHhcCCccEEE
Q 018246 179 GMTEPGKHLG----VAG-LGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD-AFLVSSDPAKVKAAMGTMDYII 252 (359)
Q Consensus 179 ~~~~~g~~Vl----I~G-~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~d~vi 252 (359)
.+.++|+.+| |+| +|++|.++++++++.|++|+.+.+.+.+.... +..+.+ .+++.+.......+..-
T Consensus 29 ~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~l~~~----- 102 (450)
T PRK08261 29 RRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAG-WGDRFGALVFDATGITDPADLKAL----- 102 (450)
T ss_pred cCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccC-cCCcccEEEEECCCCCCHHHHHHH-----
Confidence 3446777777 665 59999999999999999999987665533222 223333 34444332111111100
Q ss_pred ECCCChhhHHHHHhccccCCEEEEecCCC
Q 018246 253 DTVSAVHSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 253 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
-..+...++.|.++|+++.++...
T Consensus 103 -----~~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 103 -----YEFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred -----HHHHHHHHHhccCCCEEEEEcccc
Confidence 023567788899999999998654
No 404
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.76 E-value=0.072 Score=47.36 Aligned_cols=74 Identities=16% Similarity=0.222 Sum_probs=48.8
Q ss_pred CCCEEEEECCc---hHHHHHHHHHHHCCCeEEEEeCCh---hhHHHHHHHcCCc--EEecCCCHHHHHHh-------cCC
Q 018246 183 PGKHLGVAGLG---GLGHVAVKIGKAFGLKVTVISTSP---KKESEAISKLGAD--AFLVSSDPAKVKAA-------MGT 247 (359)
Q Consensus 183 ~g~~VlI~G~g---~vG~~a~~la~~~g~~V~~v~~~~---~~~~~~~~~~g~~--~v~~~~~~~~~~~~-------~~~ 247 (359)
.|+++||.|++ ++|.++++.+...|++|+++++++ +..+.+..+.+.. ...|-.+.+.+..+ .+.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 46889999873 899999999988999999888763 2233332223321 22355555433332 246
Q ss_pred ccEEEECCC
Q 018246 248 MDYIIDTVS 256 (359)
Q Consensus 248 ~d~vid~~g 256 (359)
+|++++++|
T Consensus 85 iD~linnAg 93 (262)
T PRK07984 85 FDGFVHSIG 93 (262)
T ss_pred CCEEEECCc
Confidence 899999997
No 405
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=95.76 E-value=0.056 Score=49.07 Aligned_cols=89 Identities=17% Similarity=0.200 Sum_probs=58.2
Q ss_pred EEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE----E-ecCCCHHHHHHhcCCccEEEECCCChhh
Q 018246 186 HLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADA----F-LVSSDPAKVKAAMGTMDYIIDTVSAVHS 260 (359)
Q Consensus 186 ~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~----v-~~~~~~~~~~~~~~~~d~vid~~g~~~~ 260 (359)
+|+|+|+|.+|.+.+..+...|.+|+++++++++.+.+ ++.|... . ......+..... ..+|+++-++....
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~~- 78 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGHDVTLVARRGAHLDAL-NENGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAYQ- 78 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECChHHHHHH-HHcCCcccCCceeecccCCCChhHc-CCCCEEEEeccccc-
Confidence 58999999999998888888899999999988887776 4445321 0 000000111222 57999999988655
Q ss_pred HHHHHhccc----cCCEEEEe
Q 018246 261 LAPLLGLLK----VNGKLVTV 277 (359)
Q Consensus 261 ~~~~~~~l~----~~G~~v~~ 277 (359)
+...++.++ ++..++.+
T Consensus 79 ~~~~~~~l~~~l~~~~~iv~~ 99 (304)
T PRK06522 79 LPAALPSLAPLLGPDTPVLFL 99 (304)
T ss_pred HHHHHHHHhhhcCCCCEEEEe
Confidence 444444443 44566655
No 406
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=95.75 E-value=0.05 Score=49.92 Aligned_cols=76 Identities=21% Similarity=0.208 Sum_probs=52.7
Q ss_pred CCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCC---cEE--ecCCCHHHHHHhcCCccEEE
Q 018246 182 EPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK---LGA---DAF--LVSSDPAKVKAAMGTMDYII 252 (359)
Q Consensus 182 ~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~---~g~---~~v--~~~~~~~~~~~~~~~~d~vi 252 (359)
..+++|||.|+ |.+|..++..+...|.+|++++++.++....... .+. -.+ .|..+.+.+.++..++|+|+
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 35789999986 9999999999999999999888776644332111 111 112 24455555666666899999
Q ss_pred ECCCC
Q 018246 253 DTVSA 257 (359)
Q Consensus 253 d~~g~ 257 (359)
.+++.
T Consensus 83 h~A~~ 87 (325)
T PLN02989 83 HTASP 87 (325)
T ss_pred EeCCC
Confidence 98873
No 407
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=95.74 E-value=0.1 Score=46.10 Aligned_cols=93 Identities=20% Similarity=0.250 Sum_probs=60.4
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc---EEecCCCHHHHHH-hcCCccEEEEC
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK---LGAD---AFLVSSDPAKVKA-AMGTMDYIIDT 254 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~-~~~~~d~vid~ 254 (359)
.++.+||-+|+|. |..+..+++. |.+|++++.+++..+.+.+. .|.. .++.. +...+.. ..+.+|+|+..
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-d~~~l~~~~~~~fD~V~~~ 119 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-AAQDIAQHLETPVDLILFH 119 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-CHHHHhhhcCCCCCEEEeh
Confidence 4567888888754 5667777764 88999999999887777333 2321 22221 2222222 23479999854
Q ss_pred CC-----C-hhhHHHHHhccccCCEEEEe
Q 018246 255 VS-----A-VHSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 255 ~g-----~-~~~~~~~~~~l~~~G~~v~~ 277 (359)
.. . ...+..+.+.|+|+|.++.+
T Consensus 120 ~vl~~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 120 AVLEWVADPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred hHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence 32 2 23578899999999999865
No 408
>PRK08328 hypothetical protein; Provisional
Probab=95.73 E-value=0.088 Score=45.83 Aligned_cols=93 Identities=20% Similarity=0.293 Sum_probs=55.6
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHH-----------------------HHHcCCcEEec-CC-
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEA-----------------------ISKLGADAFLV-SS- 236 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~-----------------------~~~~g~~~v~~-~~- 236 (359)
.+.+|+|+|+|++|..++..+...|. +++++|...-+...+ +++++.+-.++ +.
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~ 105 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVG 105 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEec
Confidence 34679999999999999999999999 888887443222111 12233211111 11
Q ss_pred --CHHHHHHhcCCccEEEECCCChhhHHHHHh--ccccCCEEEE
Q 018246 237 --DPAKVKAAMGTMDYIIDTVSAVHSLAPLLG--LLKVNGKLVT 276 (359)
Q Consensus 237 --~~~~~~~~~~~~d~vid~~g~~~~~~~~~~--~l~~~G~~v~ 276 (359)
..+.+.++..++|+|+||+.+.. ....+. +.+.+=.++.
T Consensus 106 ~~~~~~~~~~l~~~D~Vid~~d~~~-~r~~l~~~~~~~~ip~i~ 148 (231)
T PRK08328 106 RLSEENIDEVLKGVDVIVDCLDNFE-TRYLLDDYAHKKGIPLVH 148 (231)
T ss_pred cCCHHHHHHHHhcCCEEEECCCCHH-HHHHHHHHHHHcCCCEEE
Confidence 12233444568999999999865 333333 3333434443
No 409
>PRK04266 fibrillarin; Provisional
Probab=95.73 E-value=0.16 Score=43.97 Aligned_cols=97 Identities=15% Similarity=0.171 Sum_probs=59.2
Q ss_pred CCCCCCEEEEECCchHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHH---c-CCcEEe-cCCCHHHHHHhcCCccEEEE
Q 018246 180 MTEPGKHLGVAGLGGLGHVAVKIGKAFG-LKVTVISTSPKKESEAISK---L-GADAFL-VSSDPAKVKAAMGTMDYIID 253 (359)
Q Consensus 180 ~~~~g~~VlI~G~g~vG~~a~~la~~~g-~~V~~v~~~~~~~~~~~~~---~-g~~~v~-~~~~~~~~~~~~~~~d~vid 253 (359)
.+++|++||=+|+|. |..+..+++..+ .+|++++.+++.++.+.+. . +...+. |..++.....+...+|+++.
T Consensus 69 ~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~~~~~l~~~~D~i~~ 147 (226)
T PRK04266 69 PIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPERYAHVVEKVDVIYQ 147 (226)
T ss_pred CCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcchhhhccccCCEEEE
Confidence 458999999988753 334555666654 4899999999866644222 1 222221 11111111122346999995
Q ss_pred CCCCh----hhHHHHHhccccCCEEEEe
Q 018246 254 TVSAV----HSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 254 ~~g~~----~~~~~~~~~l~~~G~~v~~ 277 (359)
....+ ..+..+.+.|+|+|+++..
T Consensus 148 d~~~p~~~~~~L~~~~r~LKpGG~lvI~ 175 (226)
T PRK04266 148 DVAQPNQAEIAIDNAEFFLKDGGYLLLA 175 (226)
T ss_pred CCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 44432 1367888899999999884
No 410
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=95.73 E-value=0.075 Score=48.86 Aligned_cols=99 Identities=14% Similarity=0.234 Sum_probs=66.5
Q ss_pred HhcCCCCCCCEEEEECCchHHHHHHHHHHHC-CC-eEEEEeCChhhHHHHHHH---cCCcEEecCCCHHHHHHhcCCccE
Q 018246 176 KYYGMTEPGKHLGVAGLGGLGHVAVKIGKAF-GL-KVTVISTSPKKESEAISK---LGADAFLVSSDPAKVKAAMGTMDY 250 (359)
Q Consensus 176 ~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~-g~-~V~~v~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~d~ 250 (359)
+...+ +...++.|+|+|..|.+.+...... .. +|.+.++++++.+.+.++ +|..... .. ...++..+.|+
T Consensus 121 ~~La~-~~~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~-~~---~~~eav~~aDi 195 (325)
T TIGR02371 121 KYLAR-KDSSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRA-AT---DPREAVEGCDI 195 (325)
T ss_pred HHhCC-CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEE-eC---CHHHHhccCCE
Confidence 44444 4567899999999999866655443 44 899999999998766554 3432111 12 23344568999
Q ss_pred EEECCCChh-hHHHHHhccccCCEEEEecCCC
Q 018246 251 IIDTVSAVH-SLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 251 vid~~g~~~-~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
|+-|+.+.. .+. ...+++|-.+..+|...
T Consensus 196 VitaT~s~~P~~~--~~~l~~g~~v~~vGs~~ 225 (325)
T TIGR02371 196 LVTTTPSRKPVVK--ADWVSEGTHINAIGADA 225 (325)
T ss_pred EEEecCCCCcEec--HHHcCCCCEEEecCCCC
Confidence 998886543 232 34679999999998754
No 411
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.72 E-value=0.12 Score=45.24 Aligned_cols=76 Identities=24% Similarity=0.372 Sum_probs=49.9
Q ss_pred CCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHH----------------------HHHcCCc-EEecCC---
Q 018246 184 GKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEA----------------------ISKLGAD-AFLVSS--- 236 (359)
Q Consensus 184 g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~----------------------~~~~g~~-~v~~~~--- 236 (359)
+.+|+|+|+|++|..+++.+...|. +++++|...-+...+ +++++.. .+....
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i 103 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKL 103 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 4689999999999999999999999 888888543221111 1233321 111111
Q ss_pred CHHHHHHhcCCccEEEECCCChh
Q 018246 237 DPAKVKAAMGTMDYIIDTVSAVH 259 (359)
Q Consensus 237 ~~~~~~~~~~~~d~vid~~g~~~ 259 (359)
+.+.+.++..++|+|+||..+..
T Consensus 104 ~~~~~~~~~~~~DlVvd~~D~~~ 126 (240)
T TIGR02355 104 DDAELAALIAEHDIVVDCTDNVE 126 (240)
T ss_pred CHHHHHHHhhcCCEEEEcCCCHH
Confidence 12334455568999999999876
No 412
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.72 E-value=0.087 Score=46.59 Aligned_cols=75 Identities=12% Similarity=0.244 Sum_probs=51.0
Q ss_pred CCCEEEEECC---chHHHHHHHHHHHCCCeEEEEeCCh--hhHHHHHHHcCCc---EEecCCCHHHHHHh-------cCC
Q 018246 183 PGKHLGVAGL---GGLGHVAVKIGKAFGLKVTVISTSP--KKESEAISKLGAD---AFLVSSDPAKVKAA-------MGT 247 (359)
Q Consensus 183 ~g~~VlI~G~---g~vG~~a~~la~~~g~~V~~v~~~~--~~~~~~~~~~g~~---~v~~~~~~~~~~~~-------~~~ 247 (359)
.+++++|.|+ +++|.++++.+...|++|++++++. +..+.+.++++.. ...|-.+.+.+.++ .+.
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999985 7999999998888999999998654 3344554445421 22354554433332 247
Q ss_pred ccEEEECCCC
Q 018246 248 MDYIIDTVSA 257 (359)
Q Consensus 248 ~d~vid~~g~ 257 (359)
+|++++++|.
T Consensus 86 iD~li~nAG~ 95 (256)
T PRK07889 86 LDGVVHSIGF 95 (256)
T ss_pred CcEEEEcccc
Confidence 9999998874
No 413
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.72 E-value=0.062 Score=46.89 Aligned_cols=74 Identities=23% Similarity=0.390 Sum_probs=50.6
Q ss_pred CCEEEEECC-chHHHHHHHHHHHCCCeEEEE-eCChhhHHHHHHHc---CCc---EEecCCCHHHHHHhc-------CCc
Q 018246 184 GKHLGVAGL-GGLGHVAVKIGKAFGLKVTVI-STSPKKESEAISKL---GAD---AFLVSSDPAKVKAAM-------GTM 248 (359)
Q Consensus 184 g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v-~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~-------~~~ 248 (359)
++++||.|+ |.+|...+..+...|++|+++ ++++++.+.+.+.+ +.. ...|..+.+.+.++. +++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 468999986 999999998888889999998 88877665443332 221 123445544433322 379
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (247)
T PRK05565 85 DILVNNAGI 93 (247)
T ss_pred CEEEECCCc
Confidence 999998874
No 414
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.71 E-value=0.07 Score=46.43 Aligned_cols=75 Identities=25% Similarity=0.366 Sum_probs=52.1
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCcE-E--ecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS---KLGADA-F--LVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~---~~g~~~-v--~~~~~~~~~~~~-------~~~~ 248 (359)
++.++||.|+ |.+|...++.+.+.|.+|+++++++++.+.... ..+.+. + .|..+.+.+.+. .+.+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4578999987 999999999998899999999999877554422 234322 1 344544333222 2468
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|.++.++|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999998865
No 415
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=95.71 E-value=0.11 Score=54.54 Aligned_cols=96 Identities=19% Similarity=0.211 Sum_probs=71.7
Q ss_pred CCCEEEEECCchHHHHHHHHHHHC-CCe-------------EEEEeCChhhHHHHHHHc-CCc-EEecCCCHHHHHHhcC
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAF-GLK-------------VTVISTSPKKESEAISKL-GAD-AFLVSSDPAKVKAAMG 246 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~-g~~-------------V~~v~~~~~~~~~~~~~~-g~~-~v~~~~~~~~~~~~~~ 246 (359)
..++|+|+|+|.+|..++..+... +++ |++.+.+.++.+.+.+.+ +++ ..+|..+.+.+..+..
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~ 647 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS 647 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence 467899999999999988888654 334 888888888887776666 433 3455666666666656
Q ss_pred CccEEEECCCChhhHHHHHhccccCCEEEEec
Q 018246 247 TMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVG 278 (359)
Q Consensus 247 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 278 (359)
++|+|+.|++...-...+..|++.+-.+++..
T Consensus 648 ~~DaVIsalP~~~H~~VAkaAieaGkHvv~ek 679 (1042)
T PLN02819 648 QVDVVISLLPASCHAVVAKACIELKKHLVTAS 679 (1042)
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCCCEEECc
Confidence 79999999997654667777888887777654
No 416
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=95.70 E-value=0.11 Score=47.02 Aligned_cols=87 Identities=22% Similarity=0.263 Sum_probs=59.4
Q ss_pred EEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhhHHHH-
Q 018246 186 HLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPL- 264 (359)
Q Consensus 186 ~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~- 264 (359)
+|.|+|.|.+|...+..+...|.+|++.++++++.+.+ .+.|.... .+ ..++....|+||.|+.........
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~-~~~g~~~~---~~---~~e~~~~~d~vi~~vp~~~~~~~v~ 76 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEV-IAAGAETA---ST---AKAVAEQCDVIITMLPNSPHVKEVA 76 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH-HHCCCeec---CC---HHHHHhcCCEEEEeCCCHHHHHHHH
Confidence 68899999999988888888899999999999887776 55564321 11 223334689999888754433332
Q ss_pred ------HhccccCCEEEEecC
Q 018246 265 ------LGLLKVNGKLVTVGL 279 (359)
Q Consensus 265 ------~~~l~~~G~~v~~g~ 279 (359)
...++++-.+++++.
T Consensus 77 ~~~~~~~~~~~~g~iiid~st 97 (296)
T PRK11559 77 LGENGIIEGAKPGTVVIDMSS 97 (296)
T ss_pred cCcchHhhcCCCCcEEEECCC
Confidence 344555566666644
No 417
>PRK08264 short chain dehydrogenase; Validated
Probab=95.69 E-value=0.048 Score=47.42 Aligned_cols=71 Identities=30% Similarity=0.406 Sum_probs=51.6
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCc--E-EecCCCHHHHHHhc---CCccEEEEC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGAD--A-FLVSSDPAKVKAAM---GTMDYIIDT 254 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~--~-v~~~~~~~~~~~~~---~~~d~vid~ 254 (359)
.+.+++|.|+ |.+|..+++.+...|+ +|+++++++++.+. .+.. . ..|..+.+.+.++. +.+|++|.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 4678999986 9999999999999999 99999998776542 3321 1 23455555544443 368999999
Q ss_pred CCC
Q 018246 255 VSA 257 (359)
Q Consensus 255 ~g~ 257 (359)
.|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 886
No 418
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=95.69 E-value=0.08 Score=45.63 Aligned_cols=94 Identities=15% Similarity=0.115 Sum_probs=58.7
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe---------cCCC-----HHHH---HHh
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFL---------VSSD-----PAKV---KAA 244 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~---------~~~~-----~~~~---~~~ 244 (359)
.++.+||+.|+|- |.-++-||. .|.+|++++.++...+.+.++.+..... .... .+.. ...
T Consensus 36 ~~~~rvL~~gCG~-G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~~ 113 (218)
T PRK13255 36 PAGSRVLVPLCGK-SLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAAD 113 (218)
T ss_pred CCCCeEEEeCCCC-hHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCccc
Confidence 4677999998763 566666664 6999999999999888765555432110 0000 0000 001
Q ss_pred cCCccEEEECCCC--------hhhHHHHHhccccCCEEEEe
Q 018246 245 MGTMDYIIDTVSA--------VHSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 245 ~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~ 277 (359)
.+.+|.|+|..-- ...+..+.+.|+|+|+++++
T Consensus 114 ~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 114 LADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred CCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 1368999986531 12367888999999875543
No 419
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.68 E-value=0.083 Score=48.33 Aligned_cols=74 Identities=22% Similarity=0.218 Sum_probs=52.6
Q ss_pred CCEEEEECC-chHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCC---c-E--EecCCCHHHHHHh-------cCCc
Q 018246 184 GKHLGVAGL-GGLGHVAVKIGKAFG-LKVTVISTSPKKESEAISKLGA---D-A--FLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 184 g~~VlI~G~-g~vG~~a~~la~~~g-~~V~~v~~~~~~~~~~~~~~g~---~-~--v~~~~~~~~~~~~-------~~~~ 248 (359)
+++++|.|+ +++|.++++.+...| ++|+++++++++.+.+.+++.. . . ..|-.+.+.+..+ .+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 568999986 899999998888889 8999999998887766555531 1 1 1355554333222 2479
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|++|.++|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999998873
No 420
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=95.67 E-value=0.12 Score=51.37 Aligned_cols=92 Identities=17% Similarity=0.204 Sum_probs=66.3
Q ss_pred CEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHhc-CCccEEEECCCChhh--
Q 018246 185 KHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFL-VSSDPAKVKAAM-GTMDYIIDTVSAVHS-- 260 (359)
Q Consensus 185 ~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~-~~~d~vid~~g~~~~-- 260 (359)
++++|.|.|.+|+..++.++..|.+|++++.++++.+.+ ++.|...+. |..+++.+++.. +.+|.++-++++...
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~-~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~~~~~~ 496 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGIPLVVIETSRTRVDEL-RERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPNGYEAG 496 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHH-HHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCChHHHH
Confidence 679999999999999999999999999999999999888 677866555 334445454443 488988877765431
Q ss_pred -HHHHHhccccCCEEEEe
Q 018246 261 -LAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 261 -~~~~~~~l~~~G~~v~~ 277 (359)
+-.+.+...+.-+++.-
T Consensus 497 ~iv~~~~~~~~~~~iiar 514 (558)
T PRK10669 497 EIVASAREKRPDIEIIAR 514 (558)
T ss_pred HHHHHHHHHCCCCeEEEE
Confidence 22334445555555543
No 421
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.66 E-value=0.073 Score=47.19 Aligned_cols=75 Identities=16% Similarity=0.228 Sum_probs=50.1
Q ss_pred CCCEEEEECC---chHHHHHHHHHHHCCCeEEEEeCC---hhhHHHHHHHcCCc--EEecCCCHHHHHHh-------cCC
Q 018246 183 PGKHLGVAGL---GGLGHVAVKIGKAFGLKVTVISTS---PKKESEAISKLGAD--AFLVSSDPAKVKAA-------MGT 247 (359)
Q Consensus 183 ~g~~VlI~G~---g~vG~~a~~la~~~g~~V~~v~~~---~~~~~~~~~~~g~~--~v~~~~~~~~~~~~-------~~~ 247 (359)
.++++||.|+ +++|+++++.+...|++|+++.+. +++.+.+.++++.. ...|-.+.+.+..+ .+.
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 4688999983 699999999988899999987543 44555554455532 22344554333322 247
Q ss_pred ccEEEECCCC
Q 018246 248 MDYIIDTVSA 257 (359)
Q Consensus 248 ~d~vid~~g~ 257 (359)
+|+++++.|.
T Consensus 85 iD~lvnnAG~ 94 (260)
T PRK06997 85 LDGLVHSIGF 94 (260)
T ss_pred CcEEEEcccc
Confidence 9999998863
No 422
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.66 E-value=0.072 Score=47.00 Aligned_cols=74 Identities=18% Similarity=0.165 Sum_probs=50.8
Q ss_pred CCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH----cCCc--E--EecCCCHHHHHHh-------cCC
Q 018246 184 GKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK----LGAD--A--FLVSSDPAKVKAA-------MGT 247 (359)
Q Consensus 184 g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~----~g~~--~--v~~~~~~~~~~~~-------~~~ 247 (359)
++++||.|+ |.+|...+..+...|++|++++++.++.+.+.++ .+.. + ..|..+.+.+..+ .++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999986 9999999999988999999999987766554332 2211 1 2244444333322 247
Q ss_pred ccEEEECCCC
Q 018246 248 MDYIIDTVSA 257 (359)
Q Consensus 248 ~d~vid~~g~ 257 (359)
+|+++.+.|.
T Consensus 82 id~vv~~ag~ 91 (259)
T PRK12384 82 VDLLVYNAGI 91 (259)
T ss_pred CCEEEECCCc
Confidence 8999998873
No 423
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.65 E-value=0.096 Score=46.74 Aligned_cols=96 Identities=16% Similarity=0.250 Sum_probs=72.3
Q ss_pred cccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 018246 163 PLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKV 241 (359)
Q Consensus 163 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 241 (359)
.+||+..+....++..+---.|++|.|+|. +.+|.-.+.++...|++|++..+... .+
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~---------------------~l 195 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTR---------------------NL 195 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCC---------------------CH
Confidence 467776666666766654458999999996 99999999999999999988732211 12
Q ss_pred HHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCC
Q 018246 242 KAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 242 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
.+.....|+|+-++|.+..+...+ +++|..++++|...
T Consensus 196 ~~~~~~ADIVI~avg~~~~v~~~~--ik~GavVIDvgin~ 233 (284)
T PRK14179 196 AEVARKADILVVAIGRGHFVTKEF--VKEGAVVIDVGMNR 233 (284)
T ss_pred HHHHhhCCEEEEecCccccCCHHH--ccCCcEEEEeccee
Confidence 334456899999999988666544 99999999998654
No 424
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.64 E-value=0.066 Score=49.45 Aligned_cols=77 Identities=22% Similarity=0.379 Sum_probs=51.3
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChh---------------------hHHH---HHHHcCCc-EE--ec
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPK---------------------KESE---AISKLGAD-AF--LV 234 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~---------------------~~~~---~~~~~g~~-~v--~~ 234 (359)
...+|+|+|+|++|..++..+...|. ++++++...- +.+. .+++++.. .+ +.
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~ 102 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIV 102 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 34679999999999999999999999 9999997531 1111 11334322 11 11
Q ss_pred -CCCHHHHHHhcCCccEEEECCCChh
Q 018246 235 -SSDPAKVKAAMGTMDYIIDTVSAVH 259 (359)
Q Consensus 235 -~~~~~~~~~~~~~~d~vid~~g~~~ 259 (359)
.-..+.+..+..++|+|++|..+..
T Consensus 103 ~~~~~~~~~~~~~~~DlVid~~Dn~~ 128 (339)
T PRK07688 103 QDVTAEELEELVTGVDLIIDATDNFE 128 (339)
T ss_pred ccCCHHHHHHHHcCCCEEEEcCCCHH
Confidence 1113345556678999999999865
No 425
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=95.64 E-value=0.066 Score=52.60 Aligned_cols=95 Identities=20% Similarity=0.155 Sum_probs=62.8
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhh--
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHS-- 260 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~-- 260 (359)
.+++++|+|+|++|.+++..+...|++|+++.++.++.+.+.+.++... +...+. ........|+++++++-...
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~~-~~~~~~--~~~~~~~~diiINtT~vGm~~~ 454 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQA-LTLADL--ENFHPEEGMILANTTSVGMQPN 454 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCce-eeHhHh--hhhccccCeEEEecccCCCCCC
Confidence 4678999999999999999999999999999999988888866765432 222111 11112357889987753320
Q ss_pred ---HHHHHhccccCCEEEEecCC
Q 018246 261 ---LAPLLGLLKVNGKLVTVGLP 280 (359)
Q Consensus 261 ---~~~~~~~l~~~G~~v~~g~~ 280 (359)
..-....+++.+.++++-..
T Consensus 455 ~~~~pl~~~~l~~~~~v~D~vY~ 477 (529)
T PLN02520 455 VDETPISKHALKHYSLVFDAVYT 477 (529)
T ss_pred CCCCcccHhhCCCCCEEEEeccC
Confidence 01122446666666666443
No 426
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=95.64 E-value=0.09 Score=47.54 Aligned_cols=85 Identities=20% Similarity=0.230 Sum_probs=58.6
Q ss_pred EEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhhHHHH--
Q 018246 187 LGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPL-- 264 (359)
Q Consensus 187 VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~-- 264 (359)
|.|+|.|.+|...+..+...|.+|++.++++++.+.+ .+.|.... .+ ..+.....|+||.|+.....+...
T Consensus 2 IgvIG~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~~---~~---~~~~~~~aDivi~~vp~~~~~~~v~~ 74 (291)
T TIGR01505 2 VGFIGLGIMGSPMSINLAKAGYQLHVTTIGPEVADEL-LAAGAVTA---ET---ARQVTEQADVIFTMVPDSPQVEEVAF 74 (291)
T ss_pred EEEEEecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH-HHCCCccc---CC---HHHHHhcCCEEEEecCCHHHHHHHHc
Confidence 7788999999998888888899999999999988877 55564321 11 223345689999888865423322
Q ss_pred -----HhccccCCEEEEec
Q 018246 265 -----LGLLKVNGKLVTVG 278 (359)
Q Consensus 265 -----~~~l~~~G~~v~~g 278 (359)
...++++-.++.++
T Consensus 75 ~~~~~~~~~~~g~iivd~s 93 (291)
T TIGR01505 75 GENGIIEGAKPGKTLVDMS 93 (291)
T ss_pred CcchHhhcCCCCCEEEECC
Confidence 23445555566554
No 427
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=95.64 E-value=0.12 Score=47.21 Aligned_cols=105 Identities=15% Similarity=0.232 Sum_probs=71.3
Q ss_pred hHhcCCCCCCCEEEEECCchHHHHHHHHHHHC-CC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEE
Q 018246 175 MKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAF-GL-KVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYII 252 (359)
Q Consensus 175 l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~-g~-~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vi 252 (359)
.+...+ +...++.|+|+|..+.+-++.++.. +. +|.+.+++++..+.+.+.+....-.+....+..++...+.|+|+
T Consensus 122 a~~LA~-~da~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIv 200 (330)
T COG2423 122 AKYLAR-KDASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVV 200 (330)
T ss_pred HHHhcc-CCCcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEE
Confidence 344454 5667889999999999988888755 55 89999999998777654433221111111123355567899999
Q ss_pred ECCCChhhHHHHHhccccCCEEEEecCCC
Q 018246 253 DTVSAVHSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 253 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
-|+.+...+ -.-+.|+++-++..+|...
T Consensus 201 t~T~s~~Pi-l~~~~l~~G~hI~aiGad~ 228 (330)
T COG2423 201 TATPSTEPV-LKAEWLKPGTHINAIGADA 228 (330)
T ss_pred EecCCCCCe-ecHhhcCCCcEEEecCCCC
Confidence 988765411 2345788999999998644
No 428
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=95.64 E-value=0.094 Score=48.77 Aligned_cols=76 Identities=20% Similarity=0.187 Sum_probs=53.9
Q ss_pred CCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc--C--CcE-EecCCCHHHHHHhcCCccEEEECC
Q 018246 182 EPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL--G--ADA-FLVSSDPAKVKAAMGTMDYIIDTV 255 (359)
Q Consensus 182 ~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~--g--~~~-v~~~~~~~~~~~~~~~~d~vid~~ 255 (359)
..+.+|||.|+ |.+|..+++.+...|.+|++++++.+....+...+ + ... ..|..+.+.+.++..++|+||.++
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A 87 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA 87 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence 35678999986 99999999999999999999988876655443332 1 111 124445555666666899999988
Q ss_pred CC
Q 018246 256 SA 257 (359)
Q Consensus 256 g~ 257 (359)
+.
T Consensus 88 ~~ 89 (353)
T PLN02896 88 AS 89 (353)
T ss_pred cc
Confidence 63
No 429
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.076 Score=47.50 Aligned_cols=74 Identities=20% Similarity=0.298 Sum_probs=51.2
Q ss_pred CCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCC----c-EEecCCCHHHHHH---h---cCCc
Q 018246 184 GKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK---LGA----D-AFLVSSDPAKVKA---A---MGTM 248 (359)
Q Consensus 184 g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~---~g~----~-~v~~~~~~~~~~~---~---~~~~ 248 (359)
++++||.|+ |.+|...+..+...|++|++++++++..+...+. .+. . ...|..+.+.+.. . .+++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 567899986 9999999999888999999999988766554222 221 1 1235555443322 2 2478
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++.+.|.
T Consensus 83 d~vv~~ag~ 91 (280)
T PRK06914 83 DLLVNNAGY 91 (280)
T ss_pred eEEEECCcc
Confidence 999999874
No 430
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.63 E-value=0.23 Score=43.15 Aligned_cols=75 Identities=24% Similarity=0.333 Sum_probs=48.5
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhh-HHHHH---HHcCCc-EEe--cCCCHHHHHHh-------cCC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKK-ESEAI---SKLGAD-AFL--VSSDPAKVKAA-------MGT 247 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~-~~~~~---~~~g~~-~v~--~~~~~~~~~~~-------~~~ 247 (359)
.+.++||.|+ |.+|...+..+...|++|+++.++++. .+... +..+.. ..+ |..+.+.+..+ .++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4568999986 999999999999999999887776542 22221 222322 122 44554433322 137
Q ss_pred ccEEEECCCC
Q 018246 248 MDYIIDTVSA 257 (359)
Q Consensus 248 ~d~vid~~g~ 257 (359)
+|.++.+.|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 431
>PRK07069 short chain dehydrogenase; Validated
Probab=95.63 E-value=0.14 Score=44.88 Aligned_cols=71 Identities=20% Similarity=0.279 Sum_probs=47.9
Q ss_pred EEEECC-chHHHHHHHHHHHCCCeEEEEeCC-hhhHHHHHHHcC----Cc----EEecCCCHHHHHHh-------cCCcc
Q 018246 187 LGVAGL-GGLGHVAVKIGKAFGLKVTVISTS-PKKESEAISKLG----AD----AFLVSSDPAKVKAA-------MGTMD 249 (359)
Q Consensus 187 VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~-~~~~~~~~~~~g----~~----~v~~~~~~~~~~~~-------~~~~d 249 (359)
++|.|+ |.+|...++.+...|++|++++++ .++.+.+.+++. .. ...|..+.+.+.++ .+++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 788875 999999999998899999999987 555544433322 11 12244554433322 24789
Q ss_pred EEEECCCC
Q 018246 250 YIIDTVSA 257 (359)
Q Consensus 250 ~vid~~g~ 257 (359)
+++.++|.
T Consensus 82 ~vi~~ag~ 89 (251)
T PRK07069 82 VLVNNAGV 89 (251)
T ss_pred EEEECCCc
Confidence 99999873
No 432
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.62 E-value=0.096 Score=43.44 Aligned_cols=83 Identities=18% Similarity=0.316 Sum_probs=50.7
Q ss_pred EEEEECCchHHHHHHHHHHHCCC-eEEEEeCChh------------------hHHHH---HHHcCC-cEEecCC---CHH
Q 018246 186 HLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPK------------------KESEA---ISKLGA-DAFLVSS---DPA 239 (359)
Q Consensus 186 ~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~------------------~~~~~---~~~~g~-~~v~~~~---~~~ 239 (359)
+|+|+|+|++|..+++.+...|. +++++|...- |.+.+ +++++. ..+.... +.+
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~~ 80 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDEN 80 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecChh
Confidence 48999999999999999989999 7999986651 11111 123321 1111111 122
Q ss_pred HHHHhcCCccEEEECCCChhhHHHHHhcc
Q 018246 240 KVKAAMGTMDYIIDTVSAVHSLAPLLGLL 268 (359)
Q Consensus 240 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l 268 (359)
.+.++..++|+|++|..+..+-....+.+
T Consensus 81 ~~~~~l~~~DlVi~~~d~~~~r~~i~~~~ 109 (174)
T cd01487 81 NLEGLFGDCDIVVEAFDNAETKAMLAESL 109 (174)
T ss_pred hHHHHhcCCCEEEECCCCHHHHHHHHHHH
Confidence 34445568999999988876333333433
No 433
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.62 E-value=0.085 Score=46.46 Aligned_cols=75 Identities=17% Similarity=0.301 Sum_probs=52.8
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCc---EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS---KLGAD---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
.+.+|||.|+ |++|...+..+...|++|++++++.++.+.+.+ +.+.+ ...|..+.+.+.++ .+.+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999986 999999999988999999999988777654432 23322 12355554433322 2478
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++.+.|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999998874
No 434
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=95.62 E-value=0.1 Score=50.57 Aligned_cols=83 Identities=14% Similarity=0.255 Sum_probs=57.8
Q ss_pred hhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEE
Q 018246 172 YSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYI 251 (359)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v 251 (359)
..+++..+.--.+.+++|+|+|++|.+++..+...|++|++.++++++.+.+.+.++... ++.. .... ...+|++
T Consensus 320 ~~~l~~~~~~~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~~-~~~~---~~~~-l~~~DiV 394 (477)
T PRK09310 320 FSLLKQKNIPLNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGKA-FPLE---SLPE-LHRIDII 394 (477)
T ss_pred HHHHHhcCCCcCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccce-echh---Hhcc-cCCCCEE
Confidence 334444333236788999999999999999999999999999999888777755554322 2111 1111 2478999
Q ss_pred EECCCChh
Q 018246 252 IDTVSAVH 259 (359)
Q Consensus 252 id~~g~~~ 259 (359)
++|++...
T Consensus 395 InatP~g~ 402 (477)
T PRK09310 395 INCLPPSV 402 (477)
T ss_pred EEcCCCCC
Confidence 99987654
No 435
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=95.62 E-value=0.14 Score=46.95 Aligned_cols=88 Identities=20% Similarity=0.174 Sum_probs=60.6
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChh---
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVH--- 259 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 259 (359)
.+.+|.|+|.|.+|.+.++-++..|.+|++..+..++.....++.|.... ...++....|+|+-++....
T Consensus 16 ~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~-------s~~eaa~~ADVVvLaVPd~~~~~ 88 (330)
T PRK05479 16 KGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVL-------TVAEAAKWADVIMILLPDEVQAE 88 (330)
T ss_pred CCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeC-------CHHHHHhcCCEEEEcCCHHHHHH
Confidence 57889999999999999999999999998877765544443356675421 12344567899999998654
Q ss_pred hH-HHHHhccccCCEEEEe
Q 018246 260 SL-APLLGLLKVNGKLVTV 277 (359)
Q Consensus 260 ~~-~~~~~~l~~~G~~v~~ 277 (359)
.+ ......++++..++..
T Consensus 89 V~~~~I~~~Lk~g~iL~~a 107 (330)
T PRK05479 89 VYEEEIEPNLKEGAALAFA 107 (330)
T ss_pred HHHHHHHhcCCCCCEEEEC
Confidence 12 2344456666555433
No 436
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=95.62 E-value=0.2 Score=45.50 Aligned_cols=90 Identities=14% Similarity=0.129 Sum_probs=56.9
Q ss_pred EEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChh---hHH
Q 018246 186 HLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVH---SLA 262 (359)
Q Consensus 186 ~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~---~~~ 262 (359)
+|.|+|.|.+|...+..+...|.+|++.++++++.+.+ .+.|.... .+...+.+.....|+|+-++.... +++
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l-~~~g~~~~---~s~~~~~~~~~~~dvIi~~vp~~~~~~v~~ 77 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGHDCVGYDHDQDAVKAM-KEDRTTGV---ANLRELSQRLSAPRVVWVMVPHGIVDAVLE 77 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCccc---CCHHHHHhhcCCCCEEEEEcCchHHHHHHH
Confidence 57889999999988888888899999999999998887 45553322 122222222235677777766542 122
Q ss_pred HHHhccccCCEEEEecC
Q 018246 263 PLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 263 ~~~~~l~~~G~~v~~g~ 279 (359)
.....++++-.+++++.
T Consensus 78 ~l~~~l~~g~ivid~st 94 (298)
T TIGR00872 78 ELAPTLEKGDIVIDGGN 94 (298)
T ss_pred HHHhhCCCCCEEEECCC
Confidence 33334445545555443
No 437
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=95.61 E-value=0.15 Score=45.51 Aligned_cols=167 Identities=14% Similarity=0.163 Sum_probs=95.0
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcC--CccEEEECCCChh
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMG--TMDYIIDTVSAVH 259 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~--~~d~vid~~g~~~ 259 (359)
....+|+.+|+|=+|.-.+.-|+.+|.+|++++|=+..-.- +--...+++|--+.+.+..... .+|+++--+-.-.
T Consensus 10 ~~a~kvmLLGSGELGKEvaIe~QRLG~eViAVDrY~~APAm--qVAhrs~Vi~MlD~~al~avv~rekPd~IVpEiEAI~ 87 (394)
T COG0027 10 PQATKVMLLGSGELGKEVAIEAQRLGVEVIAVDRYANAPAM--QVAHRSYVIDMLDGDALRAVVEREKPDYIVPEIEAIA 87 (394)
T ss_pred CCCeEEEEecCCccchHHHHHHHhcCCEEEEecCcCCChhh--hhhhheeeeeccCHHHHHHHHHhhCCCeeeehhhhhh
Confidence 34556888999999999999999999999999976543211 1123467888778777777654 7888874332211
Q ss_pred hHHHHHhccccCCEEEEecCCCCCeeeC---HHHHHhcCcEEEEeec---CCHHHHHHHHHHHHhC-CCcccE-------
Q 018246 260 SLAPLLGLLKVNGKLVTVGLPEKPLEVP---IFALVGARRLVGGSNV---GGMKETQEMLDFCAKH-NIAADI------- 325 (359)
Q Consensus 260 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~~k~~~i~g~~~---~~~~~~~~~~~~l~~g-~i~~~~------- 325 (359)
.+.++..=..|..+|-... ...++.+ ...+-.+.+.+-.+.+ .+.++|.++.+.+--- ..||..
T Consensus 88 -td~L~elE~~G~~VVP~Ar-At~ltMnRegiRrlAAeeLglpTs~Y~fa~s~~e~~~a~~~iGfPcvvKPvMSSSGkGq 165 (394)
T COG0027 88 -TDALVELEEEGYTVVPNAR-ATKLTMNREGIRRLAAEELGLPTSKYRFADSLEELRAAVEKIGFPCVVKPVMSSSGKGQ 165 (394)
T ss_pred -HHHHHHHHhCCceEccchH-HHHhhhcHHHHHHHHHHHhCCCCccccccccHHHHHHHHHHcCCCeecccccccCCCCc
Confidence 3444555555556443321 1122222 2222223333333322 2233444443332211 224432
Q ss_pred -EEEccccHHHHHHHHHcCCc--cEEEEEE
Q 018246 326 -ELVRMDQINTAMERLAKSDV--KYRFVID 352 (359)
Q Consensus 326 -~~~~l~~~~~a~~~~~~~~~--~gkvvv~ 352 (359)
-+-+-+++++||+...++.. .+||+++
T Consensus 166 svv~~~e~ve~AW~~A~~g~R~~~~RVIVE 195 (394)
T COG0027 166 SVVRSPEDVEKAWEYAQQGGRGGSGRVIVE 195 (394)
T ss_pred eeecCHHHHHHHHHHHHhcCCCCCCcEEEE
Confidence 12368999999998886543 3788764
No 438
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=95.61 E-value=0.15 Score=42.70 Aligned_cols=93 Identities=26% Similarity=0.320 Sum_probs=59.9
Q ss_pred CCCCCEEEEECCchHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHH---HcCCc--EEecCCCHHHHHHhcCCccEEEEC
Q 018246 181 TEPGKHLGVAGLGGLGHVAVKIGKAF-GLKVTVISTSPKKESEAIS---KLGAD--AFLVSSDPAKVKAAMGTMDYIIDT 254 (359)
Q Consensus 181 ~~~g~~VlI~G~g~vG~~a~~la~~~-g~~V~~v~~~~~~~~~~~~---~~g~~--~v~~~~~~~~~~~~~~~~d~vid~ 254 (359)
+.++++||-+|+|. |..+..+++.. +.+|++++.+++..+.+.+ +++.. .++..+.. ....+.+|+|+..
T Consensus 29 ~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d~~---~~~~~~~D~v~~~ 104 (187)
T PRK08287 29 LHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGEAP---IELPGKADAIFIG 104 (187)
T ss_pred CCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecCch---hhcCcCCCEEEEC
Confidence 36788898888754 56666666665 4599999999987666633 33322 22222211 1223479999864
Q ss_pred CCC---hhhHHHHHhccccCCEEEEe
Q 018246 255 VSA---VHSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 255 ~g~---~~~~~~~~~~l~~~G~~v~~ 277 (359)
... ...+..+.+.|+++|+++..
T Consensus 105 ~~~~~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 105 GSGGNLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred CCccCHHHHHHHHHHhcCCCeEEEEE
Confidence 322 12467888999999998774
No 439
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.60 E-value=0.13 Score=51.62 Aligned_cols=92 Identities=15% Similarity=0.163 Sum_probs=70.3
Q ss_pred CEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHhc-CCccEEEECCCChhhH-
Q 018246 185 KHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFL-VSSDPAKVKAAM-GTMDYIIDTVSAVHSL- 261 (359)
Q Consensus 185 ~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~-~~~d~vid~~g~~~~~- 261 (359)
++|+|.|.|.+|+..++.++..|.++++++.++++.+.+ ++.|...++ |..+++.+++.. ...|.++-+.++...-
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~-~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d~~~n~ 479 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKMRITVLERDISAVNLM-RKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNEPEDTM 479 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCCCEEEEECCHHHHHHH-HhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCCHHHHH
Confidence 579999999999999999999999999999999999988 778865544 445555555543 4899999999886522
Q ss_pred --HHHHhccccCCEEEEe
Q 018246 262 --APLLGLLKVNGKLVTV 277 (359)
Q Consensus 262 --~~~~~~l~~~G~~v~~ 277 (359)
-...+...|.-+++.-
T Consensus 480 ~i~~~~r~~~p~~~IiaR 497 (601)
T PRK03659 480 KIVELCQQHFPHLHILAR 497 (601)
T ss_pred HHHHHHHHHCCCCeEEEE
Confidence 2334556677777654
No 440
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.60 E-value=0.13 Score=45.92 Aligned_cols=97 Identities=20% Similarity=0.251 Sum_probs=73.1
Q ss_pred ccccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 018246 162 APLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK 240 (359)
Q Consensus 162 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (359)
..+||+..+....++..+---.|++|+|+|- ..+|.-.+.++...|+.|++..+... .
T Consensus 136 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~---------------------~ 194 (284)
T PRK14190 136 TFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTK---------------------N 194 (284)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCch---------------------h
Confidence 3567776666777776664468999999995 89999999999999999998654321 2
Q ss_pred HHHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCC
Q 018246 241 VKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 241 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+.+.....|+++-++|.+..+. -+.+++|..++++|...
T Consensus 195 l~~~~~~ADIvI~AvG~p~~i~--~~~ik~gavVIDvGi~~ 233 (284)
T PRK14190 195 LAELTKQADILIVAVGKPKLIT--ADMVKEGAVVIDVGVNR 233 (284)
T ss_pred HHHHHHhCCEEEEecCCCCcCC--HHHcCCCCEEEEeeccc
Confidence 3344456899999999887443 45679999999998764
No 441
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.59 E-value=0.12 Score=40.92 Aligned_cols=95 Identities=20% Similarity=0.323 Sum_probs=56.4
Q ss_pred CCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChh-------------------hH---HHHHHHcC-CcEEecCC---
Q 018246 184 GKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPK-------------------KE---SEAISKLG-ADAFLVSS--- 236 (359)
Q Consensus 184 g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~-------------------~~---~~~~~~~g-~~~v~~~~--- 236 (359)
..+|+|+|+|++|..++..+...|. +++++|...- |. +..++++. ...+....
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 4689999999999999999988899 8888884321 11 11112332 22222111
Q ss_pred CHHHHHHhcCCccEEEECCCChhhHHHHHhccccCC-EEEEec
Q 018246 237 DPAKVKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNG-KLVTVG 278 (359)
Q Consensus 237 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G-~~v~~g 278 (359)
..+...++..++|+|++|..+......+.+.....+ .++..+
T Consensus 82 ~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~~~ 124 (135)
T PF00899_consen 82 DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGIPFIDAG 124 (135)
T ss_dssp SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT-EEEEEE
T ss_pred ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 123344445689999999998663444444444444 444443
No 442
>PRK07775 short chain dehydrogenase; Provisional
Probab=95.58 E-value=0.11 Score=46.39 Aligned_cols=75 Identities=24% Similarity=0.314 Sum_probs=51.5
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCcE---EecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS---KLGADA---FLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~-------~~~~ 248 (359)
+..+++|.|+ |.+|...++.+...|++|++++++.++.+.+.. ..+... ..|..+.+.+..+ .+++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 3458999986 999999999888899999999988776554422 233322 1355554433322 2478
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|++|.++|.
T Consensus 89 d~vi~~Ag~ 97 (274)
T PRK07775 89 EVLVSGAGD 97 (274)
T ss_pred CEEEECCCc
Confidence 999998874
No 443
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=95.58 E-value=0.098 Score=46.80 Aligned_cols=93 Identities=27% Similarity=0.257 Sum_probs=59.2
Q ss_pred CEEEEECCchHHHHHHHHHHHCCCeE--EEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhh--
Q 018246 185 KHLGVAGLGGLGHVAVKIGKAFGLKV--TVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHS-- 260 (359)
Q Consensus 185 ~~VlI~G~g~vG~~a~~la~~~g~~V--~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~-- 260 (359)
.+|+|.|.|.+|.+.+...+..|..| +..+++.++.+.+ .++|...-. ..+.......+.|+||-++.-..+
T Consensus 4 ~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a-~~lgv~d~~---~~~~~~~~~~~aD~VivavPi~~~~~ 79 (279)
T COG0287 4 MKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAA-LELGVIDEL---TVAGLAEAAAEADLVIVAVPIEATEE 79 (279)
T ss_pred cEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHH-hhcCccccc---ccchhhhhcccCCEEEEeccHHHHHH
Confidence 57889999999999999999999865 4455555555555 456642111 011112333478999999987652
Q ss_pred -HHHHHhccccCCEEEEecCCC
Q 018246 261 -LAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 261 -~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+......++++..+.++++..
T Consensus 80 ~l~~l~~~l~~g~iv~Dv~S~K 101 (279)
T COG0287 80 VLKELAPHLKKGAIVTDVGSVK 101 (279)
T ss_pred HHHHhcccCCCCCEEEeccccc
Confidence 233333455677777876543
No 444
>KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism]
Probab=95.57 E-value=0.04 Score=47.88 Aligned_cols=94 Identities=27% Similarity=0.359 Sum_probs=62.8
Q ss_pred CCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCC-------CHHHHHHhcCCccEEEEC--
Q 018246 184 GKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSS-------DPAKVKAAMGTMDYIIDT-- 254 (359)
Q Consensus 184 g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~-------~~~~~~~~~~~~d~vid~-- 254 (359)
|.+||-.|+|+ |++..-||| +|+.|++++.+++-.+.+.++.-.+++.+.. ....++...+.||.|+..
T Consensus 90 g~~ilDvGCGg-GLLSepLAr-lga~V~GID~s~~~V~vA~~h~~~dP~~~~~~~y~l~~~~~~~E~~~~~fDaVvcsev 167 (282)
T KOG1270|consen 90 GMKILDVGCGG-GLLSEPLAR-LGAQVTGIDASDDMVEVANEHKKMDPVLEGAIAYRLEYEDTDVEGLTGKFDAVVCSEV 167 (282)
T ss_pred CceEEEeccCc-cccchhhHh-hCCeeEeecccHHHHHHHHHhhhcCchhccccceeeehhhcchhhcccccceeeeHHH
Confidence 47788888854 667777776 5899999999999888774443333333221 012344455679998852
Q ss_pred ---CCCh-hhHHHHHhccccCCEEEEecC
Q 018246 255 ---VSAV-HSLAPLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 255 ---~g~~-~~~~~~~~~l~~~G~~v~~g~ 279 (359)
+-.+ ..++.+++.++|+|+++..-.
T Consensus 168 leHV~dp~~~l~~l~~~lkP~G~lfitti 196 (282)
T KOG1270|consen 168 LEHVKDPQEFLNCLSALLKPNGRLFITTI 196 (282)
T ss_pred HHHHhCHHHHHHHHHHHhCCCCceEeeeh
Confidence 2222 246788999999999987643
No 445
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.57 E-value=0.099 Score=46.14 Aligned_cols=74 Identities=26% Similarity=0.327 Sum_probs=49.8
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCc---EEecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS---KLGAD---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
.++++||.|+ |++|.++++.+...|++|+++++++.. +.+.+ ..+.+ ...|..+.+.+.++ .+.+
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELV-HEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHH-HHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999986 999999999999999999999987532 22222 23432 22355554332222 2479
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+++.++|.
T Consensus 86 d~lv~nAg~ 94 (260)
T PRK12823 86 DVLINNVGG 94 (260)
T ss_pred eEEEECCcc
Confidence 999999873
No 446
>PLN02823 spermine synthase
Probab=95.56 E-value=0.17 Score=46.59 Aligned_cols=93 Identities=17% Similarity=0.177 Sum_probs=59.4
Q ss_pred CCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCc---------EEecCCCHHHHHHhcCCccEEEE
Q 018246 184 GKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKESEAISKLGAD---------AFLVSSDPAKVKAAMGTMDYIID 253 (359)
Q Consensus 184 g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~~~~~~~~g~~---------~v~~~~~~~~~~~~~~~~d~vid 253 (359)
.++|||+|+|. |.++..++++.+. +|++++.+++-.+.+.+-++.. .++..+...++.+..+.||+||-
T Consensus 104 pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~~~~~yDvIi~ 182 (336)
T PLN02823 104 PKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEKRDEKFDVIIG 182 (336)
T ss_pred CCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhhCCCCccEEEe
Confidence 46899998753 4456677777665 8999999998888774445421 12222222445444458999974
Q ss_pred CCCC------------hhhHH-HHHhccccCCEEEEe
Q 018246 254 TVSA------------VHSLA-PLLGLLKVNGKLVTV 277 (359)
Q Consensus 254 ~~g~------------~~~~~-~~~~~l~~~G~~v~~ 277 (359)
-+.. ...+. .+.+.|+++|.++.-
T Consensus 183 D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q 219 (336)
T PLN02823 183 DLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQ 219 (336)
T ss_pred cCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEe
Confidence 3211 12355 678899999998754
No 447
>PRK05650 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.079 Score=47.14 Aligned_cols=72 Identities=18% Similarity=0.280 Sum_probs=50.0
Q ss_pred EEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcE---EecCCCHHHHHHh-------cCCccEE
Q 018246 186 HLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK---LGADA---FLVSSDPAKVKAA-------MGTMDYI 251 (359)
Q Consensus 186 ~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~~d~v 251 (359)
++||.|+ |++|...+..+...|++|+++++++++.+.+.+. .+.+. ..|..+.+.+..+ .+++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6889886 9999999998888999999999998876654332 23222 1244443333222 2479999
Q ss_pred EECCCC
Q 018246 252 IDTVSA 257 (359)
Q Consensus 252 id~~g~ 257 (359)
|.++|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999884
No 448
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.53 E-value=0.13 Score=45.85 Aligned_cols=97 Identities=19% Similarity=0.250 Sum_probs=73.8
Q ss_pred ccccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 018246 162 APLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK 240 (359)
Q Consensus 162 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (359)
..+||+....+..++...---.|++|+|+|- ..+|.=.+.++...|+.|++..+....
T Consensus 137 ~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~--------------------- 195 (284)
T PRK14177 137 TYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQN--------------------- 195 (284)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------
Confidence 3567766666666766654468999999995 899999999999999999987644322
Q ss_pred HHHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCC
Q 018246 241 VKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 241 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+++.+...|+++-++|.+..+. -..+++|..++++|...
T Consensus 196 l~~~~~~ADIvIsAvGk~~~i~--~~~ik~gavVIDvGin~ 234 (284)
T PRK14177 196 LPSIVRQADIIVGAVGKPEFIK--ADWISEGAVLLDAGYNP 234 (284)
T ss_pred HHHHHhhCCEEEEeCCCcCccC--HHHcCCCCEEEEecCcc
Confidence 2334456899999999988443 57899999999999754
No 449
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=95.51 E-value=0.12 Score=46.09 Aligned_cols=88 Identities=18% Similarity=0.249 Sum_probs=60.6
Q ss_pred CEEEEECCchHHHHHHHHHHH--CCCeEE-EEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhhH
Q 018246 185 KHLGVAGLGGLGHVAVKIGKA--FGLKVT-VISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSL 261 (359)
Q Consensus 185 ~~VlI~G~g~vG~~a~~la~~--~g~~V~-~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 261 (359)
-+|.|+|.|.+|...++.+.. .+.++. +.++++++.+.+.+++|....+ .+. .++....|+|+.|++.....
T Consensus 7 irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~--~~~---eell~~~D~Vvi~tp~~~h~ 81 (271)
T PRK13302 7 LRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPV--VPL---DQLATHADIVVEAAPASVLR 81 (271)
T ss_pred eEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCccc--CCH---HHHhcCCCEEEECCCcHHHH
Confidence 478999999999988877765 367766 5677777776665677743322 222 23335689999999987645
Q ss_pred HHHHhccccCCEEEEe
Q 018246 262 APLLGLLKVNGKLVTV 277 (359)
Q Consensus 262 ~~~~~~l~~~G~~v~~ 277 (359)
+....+|+.+..++..
T Consensus 82 e~~~~aL~aGk~Vi~~ 97 (271)
T PRK13302 82 AIVEPVLAAGKKAIVL 97 (271)
T ss_pred HHHHHHHHcCCcEEEe
Confidence 6667777777666543
No 450
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.51 E-value=0.1 Score=45.93 Aligned_cols=98 Identities=17% Similarity=0.126 Sum_probs=62.6
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-CCcEE-ecCCC-HHHHHHhc-CCccEEEECCCC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL-GADAF-LVSSD-PAKVKAAM-GTMDYIIDTVSA 257 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~-g~~~v-~~~~~-~~~~~~~~-~~~d~vid~~g~ 257 (359)
.+.+|||+|+ |.+|..++..+...|.+|+++.|++++........ ++..+ .|..+ .+.+.... .++|+||.+.|.
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~ 95 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF 95 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence 4678999996 99999999988888999999999887754432211 23222 24443 23343444 589999988764
Q ss_pred hh-------------hHHHHHhcccc--CCEEEEecCC
Q 018246 258 VH-------------SLAPLLGLLKV--NGKLVTVGLP 280 (359)
Q Consensus 258 ~~-------------~~~~~~~~l~~--~G~~v~~g~~ 280 (359)
.. ....+++.+.. .++++.++..
T Consensus 96 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 96 RRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 21 12334444443 3688887654
No 451
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=95.50 E-value=0.12 Score=47.36 Aligned_cols=94 Identities=15% Similarity=0.249 Sum_probs=61.2
Q ss_pred EEEEECCchHHHHHHHHHHHCC----CeEEEEeC--ChhhHHHHHHHcCC--------------------c--EEecCCC
Q 018246 186 HLGVAGLGGLGHVAVKIGKAFG----LKVTVIST--SPKKESEAISKLGA--------------------D--AFLVSSD 237 (359)
Q Consensus 186 ~VlI~G~g~vG~~a~~la~~~g----~~V~~v~~--~~~~~~~~~~~~g~--------------------~--~v~~~~~ 237 (359)
+|.|.|.|.+|+.+.+.+...+ .+|..+.. +.+.+.++. ++.- + .+...++
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll-~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLL-RYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHH-hhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 4789999999999999988754 56666542 222333442 2221 0 1111122
Q ss_pred HHHHHHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCC
Q 018246 238 PAKVKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLP 280 (359)
Q Consensus 238 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (359)
++.+.....++|+|++|+|.....+.+...++.|++.|.++.+
T Consensus 80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP 122 (325)
T TIGR01532 80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP 122 (325)
T ss_pred hhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence 2222222248999999999887778889999999899988765
No 452
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=95.49 E-value=0.08 Score=48.32 Aligned_cols=85 Identities=33% Similarity=0.406 Sum_probs=60.7
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCCh----
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAV---- 258 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~---- 258 (359)
.|++|.|+|.|.+|...+++++.+|.+|++.++.... ...+... ..+.++....|+|..++...
T Consensus 144 ~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~~~-----~~~~~~~-------~~l~ell~~sDvv~lh~Plt~~T~ 211 (311)
T PRK08410 144 KGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSGKN-----KNEEYER-------VSLEELLKTSDIISIHAPLNEKTK 211 (311)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCccc-----cccCcee-------ecHHHHhhcCCEEEEeCCCCchhh
Confidence 6899999999999999999999999999999975321 1112111 12445556678887766522
Q ss_pred hhH-HHHHhccccCCEEEEecC
Q 018246 259 HSL-APLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 259 ~~~-~~~~~~l~~~G~~v~~g~ 279 (359)
..+ ...+..|+++..+|.++-
T Consensus 212 ~li~~~~~~~Mk~~a~lIN~aR 233 (311)
T PRK08410 212 NLIAYKELKLLKDGAILINVGR 233 (311)
T ss_pred cccCHHHHHhCCCCeEEEECCC
Confidence 112 467888999988888854
No 453
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.48 E-value=0.22 Score=44.55 Aligned_cols=109 Identities=17% Similarity=0.296 Sum_probs=68.6
Q ss_pred CCCCEEEEECC-chHHHH-HHHHHHHCCCeEEEEeCChhhHHHHHHH----cCC---cEEecCCCHHH----HHHhcC--
Q 018246 182 EPGKHLGVAGL-GGLGHV-AVKIGKAFGLKVTVISTSPKKESEAISK----LGA---DAFLVSSDPAK----VKAAMG-- 246 (359)
Q Consensus 182 ~~g~~VlI~G~-g~vG~~-a~~la~~~g~~V~~v~~~~~~~~~~~~~----~g~---~~v~~~~~~~~----~~~~~~-- 246 (359)
+-|+..+|.|+ .++|.+ |-+||+ .|.+|+.++|++++++...++ .++ ..++|..+++. +.+...
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~ 125 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGL 125 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCC
Confidence 45788899987 899988 555555 899999999999998766443 332 24566655432 333322
Q ss_pred CccEEEECCCChh---------------------------hHHH-HHhcc-ccCCEEEEecCCCCCeeeCHHHH
Q 018246 247 TMDYIIDTVSAVH---------------------------SLAP-LLGLL-KVNGKLVTVGLPEKPLEVPIFAL 291 (359)
Q Consensus 247 ~~d~vid~~g~~~---------------------------~~~~-~~~~l-~~~G~~v~~g~~~~~~~~~~~~~ 291 (359)
.+-+.++++|... ..+. +-.++ +..|.++.+|...+..+.+....
T Consensus 126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ 199 (312)
T KOG1014|consen 126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSV 199 (312)
T ss_pred ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHH
Confidence 4566678887431 0011 11233 35688889888776666555443
No 454
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.47 E-value=0.2 Score=44.24 Aligned_cols=91 Identities=15% Similarity=0.230 Sum_probs=63.0
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCC----
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAF-GLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVS---- 256 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~-g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g---- 256 (359)
.++++||-+|+|. |..+..+++.. +.+|++++.+++-.+.+ ++.+.+.+. .+ ...+ ...+.||+|+....
T Consensus 28 ~~~~~vLDlGcG~-G~~~~~l~~~~p~~~v~gvD~s~~~~~~a-~~~~~~~~~-~d-~~~~-~~~~~fD~v~~~~~l~~~ 102 (255)
T PRK14103 28 ERARRVVDLGCGP-GNLTRYLARRWPGAVIEALDSSPEMVAAA-RERGVDART-GD-VRDW-KPKPDTDVVVSNAALQWV 102 (255)
T ss_pred CCCCEEEEEcCCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHH-HhcCCcEEE-cC-hhhC-CCCCCceEEEEehhhhhC
Confidence 6788999998865 66677777765 67999999999888877 454544332 11 1111 11247999987443
Q ss_pred -C-hhhHHHHHhccccCCEEEEe
Q 018246 257 -A-VHSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 257 -~-~~~~~~~~~~l~~~G~~v~~ 277 (359)
. ...+..+.+.|+|+|+++..
T Consensus 103 ~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 103 PEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred CCHHHHHHHHHHhCCCCcEEEEE
Confidence 2 23567889999999999875
No 455
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=95.47 E-value=0.38 Score=44.87 Aligned_cols=76 Identities=13% Similarity=0.072 Sum_probs=48.2
Q ss_pred CCCCEEEEECC-chHHHH--HHHHHHHCCCeEEEEeCChh--h-------------HHHHHHHcCCcE-E--ecCCCHHH
Q 018246 182 EPGKHLGVAGL-GGLGHV--AVKIGKAFGLKVTVISTSPK--K-------------ESEAISKLGADA-F--LVSSDPAK 240 (359)
Q Consensus 182 ~~g~~VlI~G~-g~vG~~--a~~la~~~g~~V~~v~~~~~--~-------------~~~~~~~~g~~~-v--~~~~~~~~ 240 (359)
..++++||.|+ +++|++ .++.+ ..|++|+++....+ + .+.+.++.|... . .|-.+.+.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 45688999986 899999 56666 88999888874221 1 233335666432 2 24444333
Q ss_pred HHHh-------cCCccEEEECCCCh
Q 018246 241 VKAA-------MGTMDYIIDTVSAV 258 (359)
Q Consensus 241 ~~~~-------~~~~d~vid~~g~~ 258 (359)
+.++ .+++|+++++++.+
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 2222 25799999998876
No 456
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.47 E-value=0.1 Score=46.20 Aligned_cols=74 Identities=19% Similarity=0.278 Sum_probs=49.3
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHHH----cCCc---EEecCCCHHHHHHh-------cC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVIST-SPKKESEAISK----LGAD---AFLVSSDPAKVKAA-------MG 246 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~-~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~-------~~ 246 (359)
.++++||.|+ +++|.+++..+...|++|+++.+ ++++.+.+.++ .+.+ ...|..+.+.+.++ .+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 5789999986 99999999999999999988864 44444433222 2322 22355554433332 24
Q ss_pred CccEEEECCC
Q 018246 247 TMDYIIDTVS 256 (359)
Q Consensus 247 ~~d~vid~~g 256 (359)
.+|++++++|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 7899999885
No 457
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.47 E-value=0.081 Score=51.02 Aligned_cols=71 Identities=24% Similarity=0.312 Sum_probs=50.0
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCCh-hhH----HHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCC
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSP-KKE----SEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSA 257 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~-~~~----~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~ 257 (359)
.+++|+|+|+|.+|+.++..+...|++|+++++.+ +.. +++ .+.|.+.+.... .+ ...+++|+|+.+.|.
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l-~~~~~~~~~~~~-~~---~~~~~~d~vv~~~g~ 78 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEEL-GELGIELVLGEY-PE---EFLEGVDLVVVSPGV 78 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHH-HhcCCEEEeCCc-ch---hHhhcCCEEEECCCC
Confidence 46889999999999999999999999999999875 222 222 345655332221 11 233579999998885
Q ss_pred h
Q 018246 258 V 258 (359)
Q Consensus 258 ~ 258 (359)
.
T Consensus 79 ~ 79 (450)
T PRK14106 79 P 79 (450)
T ss_pred C
Confidence 3
No 458
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=95.46 E-value=0.12 Score=46.92 Aligned_cols=89 Identities=18% Similarity=0.204 Sum_probs=56.5
Q ss_pred EEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-------ecCCCHHHHHHhcCCccEEEECCCCh
Q 018246 186 HLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAF-------LVSSDPAKVKAAMGTMDYIIDTVSAV 258 (359)
Q Consensus 186 ~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v-------~~~~~~~~~~~~~~~~d~vid~~g~~ 258 (359)
+|+|+|+|.+|.+.+..+...|.+|+++++ +++.+.+ ++.|.... +.....+........+|++|-|+...
T Consensus 2 kI~IiG~G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk~~ 79 (305)
T PRK12921 2 RIAVVGAGAVGGTFGGRLLEAGRDVTFLVR-PKRAKAL-RERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVKAY 79 (305)
T ss_pred eEEEECCCHHHHHHHHHHHHCCCceEEEec-HHHHHHH-HhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEeccc
Confidence 589999999999888888888999999999 7777666 55553211 00000011222335789999998865
Q ss_pred hhHHHHHhc----cccCCEEEEe
Q 018246 259 HSLAPLLGL----LKVNGKLVTV 277 (359)
Q Consensus 259 ~~~~~~~~~----l~~~G~~v~~ 277 (359)
. ++..+.. +.++..++.+
T Consensus 80 ~-~~~~~~~l~~~~~~~~~ii~~ 101 (305)
T PRK12921 80 Q-LDAAIPDLKPLVGEDTVIIPL 101 (305)
T ss_pred C-HHHHHHHHHhhcCCCCEEEEe
Confidence 5 4444443 4445555544
No 459
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.12 Score=45.50 Aligned_cols=75 Identities=17% Similarity=0.229 Sum_probs=50.3
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhh-HHHHH---HHcCCc---EEecCCCHHHHHHh-------cCC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKK-ESEAI---SKLGAD---AFLVSSDPAKVKAA-------MGT 247 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~-~~~~~---~~~g~~---~v~~~~~~~~~~~~-------~~~ 247 (359)
.+.++||.|+ |++|.++++.+.+.|++|+++++++++ .+.+. ++.+.. ...|..+.+.+.++ .+.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999986 999999999999999999999987542 23332 233422 12344444333322 247
Q ss_pred ccEEEECCCC
Q 018246 248 MDYIIDTVSA 257 (359)
Q Consensus 248 ~d~vid~~g~ 257 (359)
+|+++.+.|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 460
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.087 Score=46.45 Aligned_cols=75 Identities=19% Similarity=0.218 Sum_probs=51.3
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHH--HHHcCCc---EEecCCCHHHHHHhc-------CCcc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEA--ISKLGAD---AFLVSSDPAKVKAAM-------GTMD 249 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~--~~~~g~~---~v~~~~~~~~~~~~~-------~~~d 249 (359)
.+.++||.|+ |++|...++.+...|++|++++++++..+.. .++.+.. ...|..+.+.+..+. +++|
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 4678999986 9999999998888999999999888765222 1223422 223444444333322 4789
Q ss_pred EEEECCCC
Q 018246 250 YIIDTVSA 257 (359)
Q Consensus 250 ~vid~~g~ 257 (359)
+++.++|.
T Consensus 86 ~vi~~ag~ 93 (258)
T PRK08628 86 GLVNNAGV 93 (258)
T ss_pred EEEECCcc
Confidence 99999983
No 461
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=95.46 E-value=0.13 Score=47.30 Aligned_cols=96 Identities=20% Similarity=0.251 Sum_probs=62.0
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCc--EEecCCCHHHHHHhcCCccEEEECCC--
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFG-LKVTVISTSPKKESEAISKLGAD--AFLVSSDPAKVKAAMGTMDYIIDTVS-- 256 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g-~~V~~v~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~d~vid~~g-- 256 (359)
.++.+||-+|+|. |..+..+++..+ .+|++++.+++-++.+.++.... .++. .+........+.+|+|+.+..
T Consensus 112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~-gD~e~lp~~~~sFDvVIs~~~L~ 189 (340)
T PLN02490 112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE-GDAEDLPFPTDYADRYVSAGSIE 189 (340)
T ss_pred CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe-ccHHhCCCCCCceeEEEEcChhh
Confidence 5778999998865 666777777764 59999999988877774433211 1111 111111111236998886432
Q ss_pred ----ChhhHHHHHhccccCCEEEEecC
Q 018246 257 ----AVHSLAPLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 257 ----~~~~~~~~~~~l~~~G~~v~~g~ 279 (359)
....+..+.+.|+++|+++.++.
T Consensus 190 ~~~d~~~~L~e~~rvLkPGG~LvIi~~ 216 (340)
T PLN02490 190 YWPDPQRGIKEAYRVLKIGGKACLIGP 216 (340)
T ss_pred hCCCHHHHHHHHHHhcCCCcEEEEEEe
Confidence 12357889999999999988754
No 462
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=95.45 E-value=0.11 Score=47.70 Aligned_cols=87 Identities=21% Similarity=0.308 Sum_probs=59.3
Q ss_pred EEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE-----------EecCCCHHHHHHhcCCccEEEEC
Q 018246 186 HLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADA-----------FLVSSDPAKVKAAMGTMDYIIDT 254 (359)
Q Consensus 186 ~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~-----------v~~~~~~~~~~~~~~~~d~vid~ 254 (359)
+|.|+|+|.+|...+..+...|.+|.++++++++.+.+ ++.+... +.... ...+.....|++|-|
T Consensus 3 kI~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~vi~~ 78 (325)
T PRK00094 3 KIAVLGAGSWGTALAIVLARNGHDVTLWARDPEQAAEI-NADRENPRYLPGIKLPDNLRATT---DLAEALADADLILVA 78 (325)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-HHcCcccccCCCCcCCCCeEEeC---CHHHHHhCCCEEEEe
Confidence 58899999999999998888899999999998887777 3433110 11111 122334578999999
Q ss_pred CCChhhHHHHHh----ccccCCEEEEe
Q 018246 255 VSAVHSLAPLLG----LLKVNGKLVTV 277 (359)
Q Consensus 255 ~g~~~~~~~~~~----~l~~~G~~v~~ 277 (359)
+.... +...+. .+.++..++.+
T Consensus 79 v~~~~-~~~v~~~l~~~~~~~~~vi~~ 104 (325)
T PRK00094 79 VPSQA-LREVLKQLKPLLPPDAPIVWA 104 (325)
T ss_pred CCHHH-HHHHHHHHHhhcCCCCEEEEE
Confidence 99865 444433 34455566666
No 463
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=95.45 E-value=0.065 Score=49.06 Aligned_cols=33 Identities=42% Similarity=0.687 Sum_probs=31.7
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeC
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVIST 215 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~ 215 (359)
.|++|-|+|.|.+|...++.++.+|.+|++.++
T Consensus 141 ~gkTvGIiG~G~IG~~va~~l~afgm~v~~~d~ 173 (324)
T COG0111 141 AGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDP 173 (324)
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEECC
Confidence 488999999999999999999999999999998
No 464
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=95.45 E-value=0.082 Score=48.40 Aligned_cols=74 Identities=19% Similarity=0.138 Sum_probs=50.8
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH--H-cC----CcE-EecCCCHHHHHHhcCCccEEEE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS--K-LG----ADA-FLVSSDPAKVKAAMGTMDYIID 253 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~--~-~g----~~~-v~~~~~~~~~~~~~~~~d~vid 253 (359)
.|++|||.|+ |.+|...+..+...|.+|+++.++.++.+...+ . .+ ... ..|..+.+.+..+..++|+||.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 4789999986 999999999888899999988887664333211 1 11 111 1233444455666668999999
Q ss_pred CCC
Q 018246 254 TVS 256 (359)
Q Consensus 254 ~~g 256 (359)
+++
T Consensus 84 ~A~ 86 (322)
T PLN02986 84 TAS 86 (322)
T ss_pred eCC
Confidence 886
No 465
>PLN02256 arogenate dehydrogenase
Probab=95.44 E-value=0.15 Score=46.27 Aligned_cols=89 Identities=24% Similarity=0.239 Sum_probs=61.2
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhc-CCccEEEECCCChhh
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAM-GTMDYIIDTVSAVHS 260 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-~~~d~vid~~g~~~~ 260 (359)
-.+.+|.|+|.|.+|.+.+..++..|.+|+++++++. .+.+ +++|... ..+. .++. ...|+|+-|+....
T Consensus 34 ~~~~kI~IIG~G~mG~slA~~L~~~G~~V~~~d~~~~-~~~a-~~~gv~~---~~~~---~e~~~~~aDvVilavp~~~- 104 (304)
T PLN02256 34 SRKLKIGIVGFGNFGQFLAKTFVKQGHTVLATSRSDY-SDIA-AELGVSF---FRDP---DDFCEEHPDVVLLCTSILS- 104 (304)
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECccH-HHHH-HHcCCee---eCCH---HHHhhCCCCEEEEecCHHH-
Confidence 3556899999999999999999888999999998864 3444 5677642 2222 2222 36899999998654
Q ss_pred HHHHHh-----ccccCCEEEEecC
Q 018246 261 LAPLLG-----LLKVNGKLVTVGL 279 (359)
Q Consensus 261 ~~~~~~-----~l~~~G~~v~~g~ 279 (359)
+...+. .++++..+++++.
T Consensus 105 ~~~vl~~l~~~~l~~~~iviDv~S 128 (304)
T PLN02256 105 TEAVLRSLPLQRLKRSTLFVDVLS 128 (304)
T ss_pred HHHHHHhhhhhccCCCCEEEecCC
Confidence 333333 3556777777766
No 466
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=95.44 E-value=0.15 Score=41.20 Aligned_cols=87 Identities=22% Similarity=0.212 Sum_probs=58.7
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChh--
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPK-KESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVH-- 259 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 259 (359)
.+++|.|+|-|.-|.+.++-+|..|.+|++..+..+ ..+.+ ++-|+... .+.+...+.|+|+-.+....
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A-~~~Gf~v~-------~~~eAv~~aDvV~~L~PD~~q~ 74 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKA-KADGFEVM-------SVAEAVKKADVVMLLLPDEVQP 74 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHH-HHTT-ECC-------EHHHHHHC-SEEEE-S-HHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHH-HHCCCeec-------cHHHHHhhCCEEEEeCChHHHH
Confidence 578999999999999999999999999999988887 45555 77786432 23445567899998887643
Q ss_pred -hH-HHHHhccccCCEEEEe
Q 018246 260 -SL-APLLGLLKVNGKLVTV 277 (359)
Q Consensus 260 -~~-~~~~~~l~~~G~~v~~ 277 (359)
++ +.....|+++-.+++.
T Consensus 75 ~vy~~~I~p~l~~G~~L~fa 94 (165)
T PF07991_consen 75 EVYEEEIAPNLKPGATLVFA 94 (165)
T ss_dssp HHHHHHHHHHS-TT-EEEES
T ss_pred HHHHHHHHhhCCCCCEEEeC
Confidence 33 4555688888877765
No 467
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=95.43 E-value=0.084 Score=48.09 Aligned_cols=91 Identities=16% Similarity=0.172 Sum_probs=58.8
Q ss_pred EEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH------HHHhcCCccEEEECCCChh
Q 018246 186 HLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK------VKAAMGTMDYIIDTVSAVH 259 (359)
Q Consensus 186 ~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~------~~~~~~~~d~vid~~g~~~ 259 (359)
+|+|+|+|++|...+-.+...|.+|+.++|.+++.+.+.++-|.. +........ .....+.+|+||-|+-...
T Consensus 4 ~I~IiGaGaiG~~~a~~L~~~G~~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~~~~~~~~~~~~~~~~~~D~viv~vK~~~ 82 (305)
T PRK05708 4 TWHILGAGSLGSLWACRLARAGLPVRLILRDRQRLAAYQQAGGLT-LVEQGQASLYAIPAETADAAEPIHRLLLACKAYD 82 (305)
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCeEEEEechHHHHHHhhcCCeE-EeeCCcceeeccCCCCcccccccCEEEEECCHHh
Confidence 599999999998877777778999999999887877774343432 111111000 0011237899999887654
Q ss_pred ---hHHHHHhccccCCEEEEe
Q 018246 260 ---SLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 260 ---~~~~~~~~l~~~G~~v~~ 277 (359)
++..+...+.++..++.+
T Consensus 83 ~~~al~~l~~~l~~~t~vv~l 103 (305)
T PRK05708 83 AEPAVASLAHRLAPGAELLLL 103 (305)
T ss_pred HHHHHHHHHhhCCCCCEEEEE
Confidence 233444556677777766
No 468
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=95.42 E-value=0.099 Score=52.51 Aligned_cols=92 Identities=16% Similarity=0.288 Sum_probs=68.6
Q ss_pred CCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHhc-CCccEEEECCCChhhH
Q 018246 184 GKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFL-VSSDPAKVKAAM-GTMDYIIDTVSAVHSL 261 (359)
Q Consensus 184 g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~-~~~d~vid~~g~~~~~ 261 (359)
.++|+|.|.|.+|+..++.++..|.++++++.++++.+.+ ++.|.+.++ |.++.+.+++.. ..+|.++-+.++...-
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~-~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~~~n 478 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETL-RKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTS 478 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCCCEEEEECCHHHHHHH-HhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCHHHH
Confidence 3679999999999999999999999999999999999988 778865444 345555555443 4899999999876512
Q ss_pred ---HHHHhccccCCEEEE
Q 018246 262 ---APLLGLLKVNGKLVT 276 (359)
Q Consensus 262 ---~~~~~~l~~~G~~v~ 276 (359)
-...+.+.|.-+++.
T Consensus 479 ~~i~~~ar~~~p~~~iia 496 (621)
T PRK03562 479 LQLVELVKEHFPHLQIIA 496 (621)
T ss_pred HHHHHHHHHhCCCCeEEE
Confidence 234445556655544
No 469
>PLN02686 cinnamoyl-CoA reductase
Probab=95.42 E-value=0.093 Score=49.17 Aligned_cols=73 Identities=15% Similarity=0.174 Sum_probs=51.4
Q ss_pred CCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-----------CCcEE-ecCCCHHHHHHhcCCc
Q 018246 182 EPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL-----------GADAF-LVSSDPAKVKAAMGTM 248 (359)
Q Consensus 182 ~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~-----------g~~~v-~~~~~~~~~~~~~~~~ 248 (359)
..+++|||.|+ |.+|..++..+...|++|++++++.+..+.+ +++ +...+ .|..+.+.+.++..++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~ 129 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC 129 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence 45789999986 9999999999999999999988876655444 222 12222 2455555566666678
Q ss_pred cEEEECC
Q 018246 249 DYIIDTV 255 (359)
Q Consensus 249 d~vid~~ 255 (359)
|.||.+.
T Consensus 130 d~V~hlA 136 (367)
T PLN02686 130 AGVFHTS 136 (367)
T ss_pred cEEEecC
Confidence 8887654
No 470
>PRK06046 alanine dehydrogenase; Validated
Probab=95.41 E-value=0.1 Score=47.94 Aligned_cols=105 Identities=18% Similarity=0.324 Sum_probs=68.2
Q ss_pred HhcCCCCCCCEEEEECCchHHHHHHHHHH-HCCC-eEEEEeCChhhHHHHHHHc----CCcEEecCCCHHHHHHhcCCcc
Q 018246 176 KYYGMTEPGKHLGVAGLGGLGHVAVKIGK-AFGL-KVTVISTSPKKESEAISKL----GADAFLVSSDPAKVKAAMGTMD 249 (359)
Q Consensus 176 ~~~~~~~~g~~VlI~G~g~vG~~a~~la~-~~g~-~V~~v~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~d 249 (359)
+...+ ..-.++.|+|+|..|...+.... ..+. +|.+.++++++.+.+.+++ +..... ..+ .+++.. .|
T Consensus 122 ~~La~-~~~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~-~~~---~~~~l~-aD 195 (326)
T PRK06046 122 KYLAR-KDSKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTV-AED---IEEACD-CD 195 (326)
T ss_pred HHhCC-CCCCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEE-eCC---HHHHhh-CC
Confidence 34444 44568899999999998887666 4466 7888999998887776655 322211 222 223334 89
Q ss_pred EEEECCCChh-hHHHHHhccccCCEEEEecCCCC-CeeeCH
Q 018246 250 YIIDTVSAVH-SLAPLLGLLKVNGKLVTVGLPEK-PLEVPI 288 (359)
Q Consensus 250 ~vid~~g~~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~ 288 (359)
+|+.|+++.. .+. .+.++++-.+..+|.... ...++.
T Consensus 196 iVv~aTps~~P~~~--~~~l~~g~hV~~iGs~~p~~~El~~ 234 (326)
T PRK06046 196 ILVTTTPSRKPVVK--AEWIKEGTHINAIGADAPGKQELDP 234 (326)
T ss_pred EEEEecCCCCcEec--HHHcCCCCEEEecCCCCCccccCCH
Confidence 9999888643 222 345689889889987553 234443
No 471
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.40 E-value=0.1 Score=45.67 Aligned_cols=74 Identities=22% Similarity=0.313 Sum_probs=51.6
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc-E--EecCCCHHHHHHh-------cCCc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK---LGAD-A--FLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~-------~~~~ 248 (359)
++.++||.|+ |.+|..+++.+...|++|++++++.++.+.+.+. .+.. . ..|..+.+.+..+ .+++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999986 9999999999999999999999988776554222 2321 1 2244444433332 2378
Q ss_pred cEEEECCC
Q 018246 249 DYIIDTVS 256 (359)
Q Consensus 249 d~vid~~g 256 (359)
|++|.+.+
T Consensus 82 d~vi~~ag 89 (250)
T TIGR03206 82 DVLVNNAG 89 (250)
T ss_pred CEEEECCC
Confidence 99999987
No 472
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.099 Score=45.01 Aligned_cols=72 Identities=24% Similarity=0.291 Sum_probs=52.0
Q ss_pred CEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHHh----c-CCccEEEECCCC
Q 018246 185 KHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD-AFLVSSDPAKVKAA----M-GTMDYIIDTVSA 257 (359)
Q Consensus 185 ~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~----~-~~~d~vid~~g~ 257 (359)
++++|.|+ |.+|...++.+...|++|++++++++..+.+ +..+.. ...|-.+.+.+.++ . .++|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL-QALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH-HhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 46888886 9999999988888899999999998877666 445543 33455555444443 2 268999998775
No 473
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.38 E-value=0.11 Score=47.30 Aligned_cols=74 Identities=26% Similarity=0.285 Sum_probs=49.6
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCCh----------hhHHHHH---HHcCCc---EEecCCCHHHHHHh-
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSP----------KKESEAI---SKLGAD---AFLVSSDPAKVKAA- 244 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~----------~~~~~~~---~~~g~~---~v~~~~~~~~~~~~- 244 (359)
.++++||.|+ +++|+++++.+...|++|++++++. ++.+.+. +..|.. ...|-.+.+.+..+
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 4688999986 8999999999999999999999873 3333322 333432 12344444333322
Q ss_pred ------cCCccEEEECC-C
Q 018246 245 ------MGTMDYIIDTV-S 256 (359)
Q Consensus 245 ------~~~~d~vid~~-g 256 (359)
.+.+|++++++ |
T Consensus 87 ~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHcCCccEEEECCcc
Confidence 24789999988 5
No 474
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=95.36 E-value=0.071 Score=54.15 Aligned_cols=75 Identities=23% Similarity=0.308 Sum_probs=53.8
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCc----EEecCCCHHHHHHh-------cC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL----GAD----AFLVSSDPAKVKAA-------MG 246 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~----g~~----~v~~~~~~~~~~~~-------~~ 246 (359)
.++++||.|+ |++|.++++.+...|++|++++++.++.+...+++ +.. ...|-.+.+.+.++ .+
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4788999986 99999999999889999999999987765553332 321 22355554443332 24
Q ss_pred CccEEEECCCC
Q 018246 247 TMDYIIDTVSA 257 (359)
Q Consensus 247 ~~d~vid~~g~ 257 (359)
++|++++++|.
T Consensus 493 ~iDilV~nAG~ 503 (676)
T TIGR02632 493 GVDIVVNNAGI 503 (676)
T ss_pred CCcEEEECCCC
Confidence 79999999984
No 475
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=95.36 E-value=0.097 Score=46.32 Aligned_cols=99 Identities=18% Similarity=0.208 Sum_probs=61.9
Q ss_pred CCCEEEEECC---chHHHHHHHHHHHCCCeEEEEeCCh------hhHHHHHHHcCCc--EEecCCCHHHHHHh-------
Q 018246 183 PGKHLGVAGL---GGLGHVAVKIGKAFGLKVTVISTSP------KKESEAISKLGAD--AFLVSSDPAKVKAA------- 244 (359)
Q Consensus 183 ~g~~VlI~G~---g~vG~~a~~la~~~g~~V~~v~~~~------~~~~~~~~~~g~~--~v~~~~~~~~~~~~------- 244 (359)
.|++++|.|+ +++|+++++.+...|++|+++.++. +..+.+.++.+.. ...|-.+.+.+..+
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 4688999985 5999999999989999998876433 2233332222211 12355554433322
Q ss_pred cCCccEEEECCCCh-------h----------------------hHHHHHhccccCCEEEEecCCC
Q 018246 245 MGTMDYIIDTVSAV-------H----------------------SLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 245 ~~~~d~vid~~g~~-------~----------------------~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
.+.+|++++++|.. . ..+.++..|+.+|+++.++...
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~ 150 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG 150 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 24799999998731 0 1133555667789998886543
No 476
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=95.35 E-value=0.099 Score=47.95 Aligned_cols=88 Identities=16% Similarity=0.313 Sum_probs=62.3
Q ss_pred CCCEEEEECCchHHHHHHHHHH-HCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChh--
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGK-AFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVH-- 259 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~-~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 259 (359)
.|++|.|+|.|.+|...++.++ .+|.+|++.++..... .. ..++.... .+.++....|+|..+..-..
T Consensus 144 ~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~~~~-~~-~~~~~~~~-------~l~ell~~sDvv~lh~plt~~T 214 (323)
T PRK15409 144 HHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKE-AE-ERFNARYC-------DLDTLLQESDFVCIILPLTDET 214 (323)
T ss_pred CCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCCchh-hH-HhcCcEec-------CHHHHHHhCCEEEEeCCCChHH
Confidence 6899999999999999999998 8999999888764221 11 34444321 23455567898887665322
Q ss_pred --hH-HHHHhccccCCEEEEecC
Q 018246 260 --SL-APLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 260 --~~-~~~~~~l~~~G~~v~~g~ 279 (359)
.+ ...+..|+++..+|.++-
T Consensus 215 ~~li~~~~l~~mk~ga~lIN~aR 237 (323)
T PRK15409 215 HHLFGAEQFAKMKSSAIFINAGR 237 (323)
T ss_pred hhccCHHHHhcCCCCeEEEECCC
Confidence 12 467889999999988853
No 477
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=95.34 E-value=0.14 Score=50.37 Aligned_cols=88 Identities=26% Similarity=0.405 Sum_probs=65.0
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChh---
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVH--- 259 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 259 (359)
.|++|.|+|.|.+|...++.++.+|.+|++.++...+ +.. ..+|...+ .+.++....|+|+.++....
T Consensus 139 ~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~-~~~g~~~~-------~l~ell~~aDiV~l~lP~t~~t~ 209 (526)
T PRK13581 139 YGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYISP-ERA-AQLGVELV-------SLDELLARADFITLHTPLTPETR 209 (526)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCh-hHH-HhcCCEEE-------cHHHHHhhCCEEEEccCCChHhh
Confidence 5889999999999999999999999999999985432 222 45565433 13445557899988777432
Q ss_pred -hH-HHHHhccccCCEEEEecC
Q 018246 260 -SL-APLLGLLKVNGKLVTVGL 279 (359)
Q Consensus 260 -~~-~~~~~~l~~~G~~v~~g~ 279 (359)
.+ ...+..|+++..++.++-
T Consensus 210 ~li~~~~l~~mk~ga~lIN~aR 231 (526)
T PRK13581 210 GLIGAEELAKMKPGVRIINCAR 231 (526)
T ss_pred cCcCHHHHhcCCCCeEEEECCC
Confidence 22 467888999998888863
No 478
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=95.33 E-value=0.12 Score=48.82 Aligned_cols=76 Identities=17% Similarity=0.268 Sum_probs=53.1
Q ss_pred CCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHH------HHHHHc-CCcE-EecCCCHHHHHHhcC----Cc
Q 018246 182 EPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKES------EAISKL-GADA-FLVSSDPAKVKAAMG----TM 248 (359)
Q Consensus 182 ~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~------~~~~~~-g~~~-v~~~~~~~~~~~~~~----~~ 248 (359)
..+.+|||.|+ |.+|..+++.+...|.+|++++++.++.+ ...+.. +... ..|..+.+.+.++.. ++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~ 137 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV 137 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 56778999986 99999999999889999999998875421 111122 2332 235566665555443 69
Q ss_pred cEEEECCCC
Q 018246 249 DYIIDTVSA 257 (359)
Q Consensus 249 d~vid~~g~ 257 (359)
|+||+|++.
T Consensus 138 D~Vi~~aa~ 146 (390)
T PLN02657 138 DVVVSCLAS 146 (390)
T ss_pred cEEEECCcc
Confidence 999998864
No 479
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.33 E-value=0.23 Score=43.93 Aligned_cols=93 Identities=23% Similarity=0.260 Sum_probs=62.6
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCC---
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAF-GLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSA--- 257 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~-g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~--- 257 (359)
.++++||-+|+|. |..+..+++.. +.+|++++.+++..+.+.+.+..-.++..+-.+. .....+|+|+....-
T Consensus 30 ~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d~~~~--~~~~~fD~v~~~~~l~~~ 106 (258)
T PRK01683 30 ENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEADIASW--QPPQALDLIFANASLQWL 106 (258)
T ss_pred cCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECchhcc--CCCCCccEEEEccChhhC
Confidence 6788999998763 56677778776 4699999999998888754443222322221111 112378999865431
Q ss_pred ---hhhHHHHHhccccCCEEEEe
Q 018246 258 ---VHSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 258 ---~~~~~~~~~~l~~~G~~v~~ 277 (359)
...+..+.+.|+++|.++..
T Consensus 107 ~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 107 PDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred CCHHHHHHHHHHhcCCCcEEEEE
Confidence 23578899999999999875
No 480
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.32 E-value=0.16 Score=45.30 Aligned_cols=97 Identities=16% Similarity=0.225 Sum_probs=73.8
Q ss_pred ccccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 018246 162 APLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK 240 (359)
Q Consensus 162 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (359)
..+||+..+.+..++..+---.|++|+|+|- ..+|.=.+.++...||.|++..+....
T Consensus 136 ~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~d--------------------- 194 (282)
T PRK14180 136 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTD--------------------- 194 (282)
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCC---------------------
Confidence 3567777776777777665458999999995 899999999999999999887643221
Q ss_pred HHHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCC
Q 018246 241 VKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 241 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+.+.+...|+++-++|.+..+. -..++++..++++|...
T Consensus 195 l~~~~k~ADIvIsAvGkp~~i~--~~~vk~gavVIDvGin~ 233 (282)
T PRK14180 195 LKSHTTKADILIVAVGKPNFIT--ADMVKEGAVVIDVGINH 233 (282)
T ss_pred HHHHhhhcCEEEEccCCcCcCC--HHHcCCCcEEEEecccc
Confidence 2333456899999999988443 37899999999999753
No 481
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.32 E-value=0.17 Score=45.01 Aligned_cols=99 Identities=26% Similarity=0.413 Sum_probs=59.1
Q ss_pred CCCEEEEECCchHHHHHHHHHHHCCC-eEEEEeCChhhH----------------------HHHHHHcCCc-EEecCC--
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISTSPKKE----------------------SEAISKLGAD-AFLVSS-- 236 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~g~-~V~~v~~~~~~~----------------------~~~~~~~g~~-~v~~~~-- 236 (359)
.+.+|+|+|+|++|..++..+...|. ++++++...-.. .+.+.+++.. .+....
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 45789999999999999999999997 899988552111 1111233321 121111
Q ss_pred -CHHHHHHhc-CCccEEEECCCChhhHHHHHhcc-ccCCEEEEecCCC
Q 018246 237 -DPAKVKAAM-GTMDYIIDTVSAVHSLAPLLGLL-KVNGKLVTVGLPE 281 (359)
Q Consensus 237 -~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~ 281 (359)
..+...++. ..+|+|+||.+....-..+.+.. +.+=.++..|+..
T Consensus 109 i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGag 156 (268)
T PRK15116 109 ITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAG 156 (268)
T ss_pred cChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCcc
Confidence 123344444 47999999999854233333333 3344566665544
No 482
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.32 E-value=0.096 Score=45.85 Aligned_cols=75 Identities=25% Similarity=0.337 Sum_probs=49.8
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEE-EeCChhhHHHHHH---HcCCcE---EecCCCHHHHHHh-------cCC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTV-ISTSPKKESEAIS---KLGADA---FLVSSDPAKVKAA-------MGT 247 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~-v~~~~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~-------~~~ 247 (359)
++.++||.|+ |.+|+.++..+...|++|++ .+++.++.+.+.+ ..+... ..|..+.+.+..+ .+.
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999986 99999999999999998876 4666665544322 234321 2344444433332 246
Q ss_pred ccEEEECCCC
Q 018246 248 MDYIIDTVSA 257 (359)
Q Consensus 248 ~d~vid~~g~ 257 (359)
+|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (250)
T PRK08063 83 LDVFVNNAAS 92 (250)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 483
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.31 E-value=0.13 Score=45.45 Aligned_cols=75 Identities=25% Similarity=0.405 Sum_probs=50.3
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHH--HHHcCCc---EEecCCCHHHHHHh-------cCCcc
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEA--ISKLGAD---AFLVSSDPAKVKAA-------MGTMD 249 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~--~~~~g~~---~v~~~~~~~~~~~~-------~~~~d 249 (359)
.+.+++|.|+ |.+|...++.+...|++|++++++++..+.. .++.+.. ...|..+.+.+.++ .+.+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678999986 9999999999999999999999887532222 1222322 12344554433332 24789
Q ss_pred EEEECCCC
Q 018246 250 YIIDTVSA 257 (359)
Q Consensus 250 ~vid~~g~ 257 (359)
++|.+.|.
T Consensus 85 ~vi~~ag~ 92 (263)
T PRK08226 85 ILVNNAGV 92 (263)
T ss_pred EEEECCCc
Confidence 99998884
No 484
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.31 E-value=0.052 Score=47.75 Aligned_cols=72 Identities=22% Similarity=0.275 Sum_probs=49.3
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHHh-------cCCccEEEE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD-AFLVSSDPAKVKAA-------MGTMDYIID 253 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~-------~~~~d~vid 253 (359)
.++++||.|+ |++|...++.+...|++|+++++++++. . ...... ...|..+.+.+.++ .+.+|++|.
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~--~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 81 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET--V-DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVN 81 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh--h-cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4788999986 9999999999999999999999887541 1 111121 22344554433332 246899999
Q ss_pred CCCC
Q 018246 254 TVSA 257 (359)
Q Consensus 254 ~~g~ 257 (359)
+.|.
T Consensus 82 ~ag~ 85 (252)
T PRK07856 82 NAGG 85 (252)
T ss_pred CCCC
Confidence 8873
No 485
>PLN02244 tocopherol O-methyltransferase
Probab=95.29 E-value=0.12 Score=47.87 Aligned_cols=95 Identities=20% Similarity=0.270 Sum_probs=61.4
Q ss_pred CCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCc-E--EecCCCHHHHHHhcCCccEEEECC
Q 018246 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAIS---KLGAD-A--FLVSSDPAKVKAAMGTMDYIIDTV 255 (359)
Q Consensus 182 ~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~d~vid~~ 255 (359)
+++++||-+|+|. |..+..+++..|++|++++.+++..+.+.+ +.|.. . ++..+ .....-..+.||+|+..-
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D-~~~~~~~~~~FD~V~s~~ 194 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVAD-ALNQPFEDGQFDLVWSME 194 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcC-cccCCCCCCCccEEEECC
Confidence 6788999998764 556778888789999999999987665522 22321 1 11111 101100123799998643
Q ss_pred CC------hhhHHHHHhccccCCEEEEec
Q 018246 256 SA------VHSLAPLLGLLKVNGKLVTVG 278 (359)
Q Consensus 256 g~------~~~~~~~~~~l~~~G~~v~~g 278 (359)
.. ...+..+.+.|+|||+++...
T Consensus 195 ~~~h~~d~~~~l~e~~rvLkpGG~lvi~~ 223 (340)
T PLN02244 195 SGEHMPDKRKFVQELARVAAPGGRIIIVT 223 (340)
T ss_pred chhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 32 235678899999999998864
No 486
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=95.29 E-value=0.13 Score=45.84 Aligned_cols=85 Identities=22% Similarity=0.293 Sum_probs=58.2
Q ss_pred EEEEECCchHHHHHHHHHHHCC---CeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhhHH
Q 018246 186 HLGVAGLGGLGHVAVKIGKAFG---LKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLA 262 (359)
Q Consensus 186 ~VlI~G~g~vG~~a~~la~~~g---~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 262 (359)
+|.|+|+|.+|.+.+..+...| .+|+++++++++.+.+.+++|... . .+. .+.....|+||-|+.... +.
T Consensus 4 ~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~-~--~~~---~~~~~~advVil~v~~~~-~~ 76 (267)
T PRK11880 4 KIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRA-A--TDN---QEAAQEADVVVLAVKPQV-ME 76 (267)
T ss_pred EEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCee-c--CCh---HHHHhcCCEEEEEcCHHH-HH
Confidence 5889999999999888888777 589999999988877755556532 1 111 122346799999887665 55
Q ss_pred HHHhccccC--CEEEEe
Q 018246 263 PLLGLLKVN--GKLVTV 277 (359)
Q Consensus 263 ~~~~~l~~~--G~~v~~ 277 (359)
..++.+++. ..++.+
T Consensus 77 ~v~~~l~~~~~~~vvs~ 93 (267)
T PRK11880 77 EVLSELKGQLDKLVVSI 93 (267)
T ss_pred HHHHHHHhhcCCEEEEe
Confidence 555555542 344444
No 487
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=95.29 E-value=0.36 Score=36.96 Aligned_cols=85 Identities=18% Similarity=0.262 Sum_probs=59.1
Q ss_pred EEEEECCchHHHHHHHHHHHC--CCeEE-EEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhc--CCccEEEECCCChhh
Q 018246 186 HLGVAGLGGLGHVAVKIGKAF--GLKVT-VISTSPKKESEAISKLGADAFLVSSDPAKVKAAM--GTMDYIIDTVSAVHS 260 (359)
Q Consensus 186 ~VlI~G~g~vG~~a~~la~~~--g~~V~-~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~--~~~d~vid~~g~~~~ 260 (359)
+|.|+|.|.+|......++.. +.++. +.++++++.+.+.+++|.. .+ ++. .++. ..+|+|+.++....-
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~--~~~---~~ll~~~~~D~V~I~tp~~~h 75 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VY--TDL---EELLADEDVDAVIIATPPSSH 75 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EE--SSH---HHHHHHTTESEEEEESSGGGH
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-ch--hHH---HHHHHhhcCCEEEEecCCcch
Confidence 578999999999988767666 34655 5677877888777888887 32 322 2222 279999998887664
Q ss_pred HHHHHhccccCCEEEEe
Q 018246 261 LAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 261 ~~~~~~~l~~~G~~v~~ 277 (359)
.+.+..+++.|-. +++
T Consensus 76 ~~~~~~~l~~g~~-v~~ 91 (120)
T PF01408_consen 76 AEIAKKALEAGKH-VLV 91 (120)
T ss_dssp HHHHHHHHHTTSE-EEE
T ss_pred HHHHHHHHHcCCE-EEE
Confidence 6666677766664 444
No 488
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.28 E-value=0.31 Score=42.61 Aligned_cols=98 Identities=16% Similarity=0.196 Sum_probs=61.3
Q ss_pred CCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCC-hhhHHHHH---HHcCCc---EEecCCCHHHHHHh-------cCCc
Q 018246 184 GKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTS-PKKESEAI---SKLGAD---AFLVSSDPAKVKAA-------MGTM 248 (359)
Q Consensus 184 g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~-~~~~~~~~---~~~g~~---~v~~~~~~~~~~~~-------~~~~ 248 (359)
+.++||.|+ |.+|...++-+...|++|+++.++ .++..... +..+.. ...|..+.+.+.++ .+++
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA 85 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence 578999986 999999998888899998776643 33332221 233322 12344444333222 2478
Q ss_pred cEEEECCCCh-------------------------hhHHHHHhccccCCEEEEecCCC
Q 018246 249 DYIIDTVSAV-------------------------HSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 249 d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
|++|.+.|.. ...+.+.+.++..|+++.++...
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 143 (252)
T PRK06077 86 DILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVA 143 (252)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchh
Confidence 9999999731 01234455666788999987644
No 489
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.28 E-value=0.18 Score=45.01 Aligned_cols=97 Identities=23% Similarity=0.265 Sum_probs=73.6
Q ss_pred ccccchhhhhhhHhHhcCCCCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 018246 162 APLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAK 240 (359)
Q Consensus 162 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (359)
..+||+..+.+..++..+---.|++|+|+|- ..+|.=.+.++...++.|++..+....
T Consensus 135 ~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~n--------------------- 193 (282)
T PRK14166 135 GFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKD--------------------- 193 (282)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------
Confidence 3567777776777776654458999999995 799999999999999999976654222
Q ss_pred HHHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCC
Q 018246 241 VKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 241 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+++.+...|+++-++|.+..+. -..+++|..++++|...
T Consensus 194 l~~~~~~ADIvIsAvGkp~~i~--~~~vk~GavVIDvGin~ 232 (282)
T PRK14166 194 LSLYTRQADLIIVAAGCVNLLR--SDMVKEGVIVVDVGINR 232 (282)
T ss_pred HHHHHhhCCEEEEcCCCcCccC--HHHcCCCCEEEEecccc
Confidence 2334456899999999988443 45899999999999653
No 490
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.27 E-value=0.13 Score=43.03 Aligned_cols=116 Identities=14% Similarity=0.138 Sum_probs=76.2
Q ss_pred ccccchhhhhhhHhHhcCC---------CCCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-Cc
Q 018246 162 APLLCAGITVYSPMKYYGM---------TEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLG-AD 230 (359)
Q Consensus 162 a~l~~~~~ta~~~l~~~~~---------~~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g-~~ 230 (359)
..+||+....+..|+...- --.|++|+|+|- ..+|.=.+.++...||+|++.+.+.-.. . .+-+ ..
T Consensus 31 ~~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~--~-~~~~~~~ 107 (197)
T cd01079 31 SILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV--F-TRGESIR 107 (197)
T ss_pred CccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc--c-ccccccc
Confidence 3466766666666665532 257999999995 7999999999999999999886432111 0 0000 00
Q ss_pred EEecC-CC-HHHHHHhcCCccEEEECCCChhhHHHHHhccccCCEEEEecCCC
Q 018246 231 AFLVS-SD-PAKVKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPE 281 (359)
Q Consensus 231 ~v~~~-~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (359)
+--.. .+ ...+.+.....|+|+-++|.+. +.---+.+++|..++++|...
T Consensus 108 hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~-~~i~~d~ik~GavVIDVGi~~ 159 (197)
T cd01079 108 HEKHHVTDEEAMTLDCLSQSDVVITGVPSPN-YKVPTELLKDGAICINFASIK 159 (197)
T ss_pred cccccccchhhHHHHHhhhCCEEEEccCCCC-CccCHHHcCCCcEEEEcCCCc
Confidence 00000 11 1225566778999999999988 322357899999999998763
No 491
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.27 E-value=0.1 Score=45.58 Aligned_cols=73 Identities=15% Similarity=0.137 Sum_probs=49.9
Q ss_pred CEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCc-E--EecCCCHHHHHHh----cCCccEEE
Q 018246 185 KHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKL----GAD-A--FLVSSDPAKVKAA----MGTMDYII 252 (359)
Q Consensus 185 ~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~----g~~-~--v~~~~~~~~~~~~----~~~~d~vi 252 (359)
++++|.|+ |++|...++.+.+.|++|+++++++++.+...+++ +.. . ..|..+.+.+.++ ...+|+++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv 81 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL 81 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence 47899886 99999999999999999999999988765543332 111 1 1244444333332 23679999
Q ss_pred ECCCC
Q 018246 253 DTVSA 257 (359)
Q Consensus 253 d~~g~ 257 (359)
.++|.
T Consensus 82 ~~ag~ 86 (243)
T PRK07102 82 IAVGT 86 (243)
T ss_pred ECCcC
Confidence 88764
No 492
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.25 E-value=0.12 Score=45.27 Aligned_cols=76 Identities=18% Similarity=0.295 Sum_probs=50.9
Q ss_pred CCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc--EE--ecCC--CHHH-------HHHh
Q 018246 182 EPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK---LGAD--AF--LVSS--DPAK-------VKAA 244 (359)
Q Consensus 182 ~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~---~g~~--~v--~~~~--~~~~-------~~~~ 244 (359)
.++.+++|.|+ |.+|...++.+...|++|++++++.++.+.+.++ .+.. .+ .+.. +.+. +.+.
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ 89 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence 47889999986 9999999998888899999999998765444332 2321 12 2222 2222 2222
Q ss_pred cCCccEEEECCCC
Q 018246 245 MGTMDYIIDTVSA 257 (359)
Q Consensus 245 ~~~~d~vid~~g~ 257 (359)
.+.+|.++.+.+.
T Consensus 90 ~~~id~vi~~Ag~ 102 (247)
T PRK08945 90 FGRLDGVLHNAGL 102 (247)
T ss_pred hCCCCEEEECCcc
Confidence 2478999998764
No 493
>PRK08278 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.17 Score=45.19 Aligned_cols=75 Identities=24% Similarity=0.324 Sum_probs=50.3
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhh-------HHHH---HHHcCCc---EEecCCCHHHHHHh----
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKK-------ESEA---ISKLGAD---AFLVSSDPAKVKAA---- 244 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~-------~~~~---~~~~g~~---~v~~~~~~~~~~~~---- 244 (359)
.+.++||.|+ |++|..+++.+...|++|++++++.+. ++.+ .+..+.+ ...|..+.+.+..+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 4678999986 999999999998899999999987542 2211 1233432 12355555433332
Q ss_pred ---cCCccEEEECCCC
Q 018246 245 ---MGTMDYIIDTVSA 257 (359)
Q Consensus 245 ---~~~~d~vid~~g~ 257 (359)
.+.+|++|+++|.
T Consensus 85 ~~~~g~id~li~~ag~ 100 (273)
T PRK08278 85 VERFGGIDICVNNASA 100 (273)
T ss_pred HHHhCCCCEEEECCCC
Confidence 2479999998874
No 494
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=95.23 E-value=0.082 Score=49.58 Aligned_cols=74 Identities=8% Similarity=0.027 Sum_probs=50.6
Q ss_pred CCCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHhcCCccEEEECCC
Q 018246 182 EPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADA-FLVSSDPAKVKAAMGTMDYIIDTVS 256 (359)
Q Consensus 182 ~~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g 256 (359)
..+.+|||+|+ |.+|..++..+...|.+|+++++........ ..++... ..|..+.+.+..+..++|+||.+++
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE-DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc-ccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 46789999986 9999999999999999999999754321111 1112222 2244444555555568999999874
No 495
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=95.21 E-value=0.26 Score=45.98 Aligned_cols=62 Identities=21% Similarity=0.236 Sum_probs=47.2
Q ss_pred CCccccccccchhhhhhhHhHhcCCCCCCCEEEEECCchHHHHHHHHHHHCCCeEEEEeCChh
Q 018246 156 MPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPK 218 (359)
Q Consensus 156 l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~vG~~a~~la~~~g~~V~~v~~~~~ 218 (359)
...++|....+...+- .++...+.--.|.+|.|-|.|.+|..+++.+...|++|++++.+..
T Consensus 180 ~~r~~aTg~Gv~~~~~-~a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g 241 (411)
T COG0334 180 LGRSEATGYGVFYAIR-EALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKG 241 (411)
T ss_pred CCCCcccceehHHHHH-HHHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 3445566666655554 5555555424899999999999999999999999999999987766
No 496
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=95.20 E-value=0.19 Score=44.82 Aligned_cols=86 Identities=15% Similarity=0.183 Sum_probs=58.4
Q ss_pred EEEEECCchHHHHHHHHHHHC--CCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEECCCChhhHH
Q 018246 186 HLGVAGLGGLGHVAVKIGKAF--GLK-VTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLA 262 (359)
Q Consensus 186 ~VlI~G~g~vG~~a~~la~~~--g~~-V~~v~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 262 (359)
+|.|+|.|.+|...++..... +.+ +.+.++++++.+.+.++++... + .+. .++...+|+|++|++.....+
T Consensus 3 rIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~~-~--~~~---~ell~~~DvVvi~a~~~~~~~ 76 (265)
T PRK13304 3 KIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAKA-C--LSI---DELVEDVDLVVECASVNAVEE 76 (265)
T ss_pred EEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCee-E--CCH---HHHhcCCCEEEEcCChHHHHH
Confidence 588999999999888776654 455 5567788888777756666432 2 222 233367999999998766456
Q ss_pred HHHhccccCCEEEEe
Q 018246 263 PLLGLLKVNGKLVTV 277 (359)
Q Consensus 263 ~~~~~l~~~G~~v~~ 277 (359)
.+...++.+-.++..
T Consensus 77 ~~~~al~~Gk~Vvv~ 91 (265)
T PRK13304 77 VVPKSLENGKDVIIM 91 (265)
T ss_pred HHHHHHHcCCCEEEE
Confidence 667777765555543
No 497
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=95.19 E-value=0.14 Score=44.96 Aligned_cols=73 Identities=23% Similarity=0.259 Sum_probs=50.7
Q ss_pred CEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc---EEecCCCHHHHHHh-------cCCccE
Q 018246 185 KHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISK---LGAD---AFLVSSDPAKVKAA-------MGTMDY 250 (359)
Q Consensus 185 ~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~-------~~~~d~ 250 (359)
++++|.|+ |.+|...++.+...|++|+++.+++++.+.+.+. .+.. ...|-.+.+.+.++ .+..|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 36889886 9999999999999999999999987765544332 3322 12344555444332 236899
Q ss_pred EEECCCC
Q 018246 251 IIDTVSA 257 (359)
Q Consensus 251 vid~~g~ 257 (359)
++.+.|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9998874
No 498
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=95.18 E-value=0.15 Score=42.53 Aligned_cols=92 Identities=24% Similarity=0.281 Sum_probs=55.9
Q ss_pred CCCEEEEECCchHHHHHHHHHHHC-CCeEEEEeCChhhHHHH---HHHcCCcE--EecCCCHHHHHHhcCCccEEEECCC
Q 018246 183 PGKHLGVAGLGGLGHVAVKIGKAF-GLKVTVISTSPKKESEA---ISKLGADA--FLVSSDPAKVKAAMGTMDYIIDTVS 256 (359)
Q Consensus 183 ~g~~VlI~G~g~vG~~a~~la~~~-g~~V~~v~~~~~~~~~~---~~~~g~~~--v~~~~~~~~~~~~~~~~d~vid~~g 256 (359)
++++||-+|+|. |..++.+++.. +.+|++++.+++..+.+ .++.+.+. ++..+-.+ + ...+.+|+|+...-
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~d~~~-~-~~~~~fD~I~s~~~ 118 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNGRAED-F-QHEEQFDVITSRAL 118 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEecchhh-c-cccCCccEEEehhh
Confidence 478899888643 44455555544 35999999998755443 23455432 22222111 1 11347999986431
Q ss_pred -C-hhhHHHHHhccccCCEEEEe
Q 018246 257 -A-VHSLAPLLGLLKVNGKLVTV 277 (359)
Q Consensus 257 -~-~~~~~~~~~~l~~~G~~v~~ 277 (359)
. ...++.+.+.|+++|+++..
T Consensus 119 ~~~~~~~~~~~~~LkpgG~lvi~ 141 (181)
T TIGR00138 119 ASLNVLLELTLNLLKVGGYFLAY 141 (181)
T ss_pred hCHHHHHHHHHHhcCCCCEEEEE
Confidence 1 22456778899999999876
No 499
>PRK09135 pteridine reductase; Provisional
Probab=95.18 E-value=0.14 Score=44.75 Aligned_cols=75 Identities=17% Similarity=0.216 Sum_probs=49.3
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHH---Hc-C--Cc-EEecCCCHHHHHHh-------cC
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPK-KESEAIS---KL-G--AD-AFLVSSDPAKVKAA-------MG 246 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~-~~~~~~~---~~-g--~~-~v~~~~~~~~~~~~-------~~ 246 (359)
.++++||.|+ |.+|..+++.+...|++|++++++.+ +.+.+.+ +. + .. ...|..+.+.+..+ .+
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4578999986 99999999988889999999998643 3333211 22 1 11 22355554443332 23
Q ss_pred CccEEEECCCC
Q 018246 247 TMDYIIDTVSA 257 (359)
Q Consensus 247 ~~d~vid~~g~ 257 (359)
.+|++|.++|.
T Consensus 85 ~~d~vi~~ag~ 95 (249)
T PRK09135 85 RLDALVNNASS 95 (249)
T ss_pred CCCEEEECCCC
Confidence 68999999873
No 500
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.18 E-value=0.15 Score=44.64 Aligned_cols=69 Identities=23% Similarity=0.253 Sum_probs=48.1
Q ss_pred CCCEEEEECC-chHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc---EEecCCCHHHHHHh-------cCCccEE
Q 018246 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGAD---AFLVSSDPAKVKAA-------MGTMDYI 251 (359)
Q Consensus 183 ~g~~VlI~G~-g~vG~~a~~la~~~g~~V~~v~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~-------~~~~d~v 251 (359)
.++++||.|+ |.+|...+..+...|++|++++++. . +..+.. ...|..+.+.+.++ .+.+|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----L-TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----h-hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999986 9999999999988999999999875 1 222321 12344444433332 2468999
Q ss_pred EECCCC
Q 018246 252 IDTVSA 257 (359)
Q Consensus 252 id~~g~ 257 (359)
+.+.|.
T Consensus 81 i~~ag~ 86 (252)
T PRK08220 81 VNAAGI 86 (252)
T ss_pred EECCCc
Confidence 999875
Done!