Your job contains 1 sequence.
>018247
MECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEE
LAFQDEEAARNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYR
MTELQGSDENDDANGDAGKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDE
NDSEVHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQ
SLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIY
LVKELHSKINLPSSSNSLMIDPCKDKLQVLNEQETLTGLQTQNLGHGFLLLAYQKILLN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018247
(359 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2158705 - symbol:RING1A "RING 1A" species:3702... 638 1.8e-62 1
TAIR|locus:2825930 - symbol:AT1G28327 "AT1G28327" species... 247 4.9e-21 1
RGD|1305491 - symbol:Rnf2 "ring finger protein 2" species... 189 2.7e-15 3
ZFIN|ZDB-GENE-030131-5243 - symbol:rnf2 "ring finger prot... 190 4.8e-15 2
UNIPROTKB|E1BQF7 - symbol:RNF2 "Uncharacterized protein" ... 190 5.5e-15 3
UNIPROTKB|Q99496 - symbol:RNF2 "E3 ubiquitin-protein liga... 189 6.0e-15 3
UNIPROTKB|Q5R9J5 - symbol:RNF2 "E3 ubiquitin-protein liga... 189 6.0e-15 3
UNIPROTKB|A6QLQ0 - symbol:RNF2 "RNF2 protein" species:991... 189 7.6e-15 3
MGI|MGI:1101759 - symbol:Rnf2 "ring finger protein 2" spe... 189 7.6e-15 3
UNIPROTKB|F1S3N6 - symbol:RNF2 "Uncharacterized protein" ... 189 9.6e-15 3
UNIPROTKB|E2RFW1 - symbol:RNF2 "Uncharacterized protein" ... 189 9.9e-15 3
UNIPROTKB|Q7ZWM8 - symbol:rnf2-b "E3 ubiquitin-protein li... 189 7.0e-13 2
UNIPROTKB|Q66J69 - symbol:rnf2-a "E3 ubiquitin-protein li... 189 7.2e-13 2
UNIPROTKB|F1MUV0 - symbol:RING1 "Uncharacterized protein"... 191 1.1e-12 1
UNIPROTKB|Q5TJF3 - symbol:RING1 "E3 ubiquitin-protein lig... 191 1.4e-12 1
UNIPROTKB|A5D9P0 - symbol:RING1 "Ring finger protein 1" s... 191 1.4e-12 1
UNIPROTKB|A1YER5 - symbol:RING1 "E3 ubiquitin-protein lig... 190 1.4e-12 1
UNIPROTKB|A1YFY1 - symbol:RING1 "E3 ubiquitin-protein lig... 190 1.4e-12 1
UNIPROTKB|A2T6X5 - symbol:RING1 "E3 ubiquitin-protein lig... 190 1.4e-12 1
UNIPROTKB|Q8WMN5 - symbol:RING1 "E3 ubiquitin-protein lig... 190 1.4e-12 1
UNIPROTKB|Q06587 - symbol:RING1 "E3 ubiquitin-protein lig... 190 1.8e-12 1
RGD|3576 - symbol:Ring1 "ring finger protein 1" species:1... 190 1.8e-12 1
MGI|MGI:1101770 - symbol:Ring1 "ring finger protein 1" sp... 189 2.3e-12 1
FB|FBgn0003330 - symbol:Sce "Sex combs extra" species:722... 179 4.1e-11 1
UNIPROTKB|Q3KNV8 - symbol:PCGF3 "Polycomb group RING fing... 88 0.00013 2
UNIPROTKB|Q2KJ29 - symbol:PCGF3 "Polycomb group RING fing... 88 0.00027 2
UNIPROTKB|F1NLA3 - symbol:PCGF3 "Uncharacterized protein"... 88 0.00035 2
UNIPROTKB|F1PGG1 - symbol:PCGF3 "Uncharacterized protein"... 88 0.00048 2
UNIPROTKB|I3LAF0 - symbol:PCGF3 "Uncharacterized protein"... 88 0.00052 2
MGI|MGI:1916837 - symbol:Pcgf3 "polycomb group ring finge... 88 0.00053 2
UNIPROTKB|E1BAF7 - symbol:E1BAF7 "Uncharacterized protein... 88 0.00068 2
>TAIR|locus:2158705 [details] [associations]
symbol:RING1A "RING 1A" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010076 "maintenance of floral meristem identity"
evidence=IMP] [GO:0010077 "maintenance of inflorescence meristem
identity" evidence=IMP] [GO:0010492 "maintenance of shoot apical
meristem identity" evidence=IMP] [GO:0035102 "PRC1 complex"
evidence=IPI] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IGI] EMBL:CP002688
GO:GO:0016874 GO:GO:0035102 GO:GO:0045814 KO:K10695 IPI:IPI00938631
RefSeq:NP_001154760.1 UniGene:At.30083 ProteinModelPortal:F4K8U4
SMR:F4K8U4 PRIDE:F4K8U4 EnsemblPlants:AT5G44280.2 GeneID:834451
KEGG:ath:AT5G44280 OMA:NASEAHE Uniprot:F4K8U4
Length = 525
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 153/352 (43%), Positives = 213/352 (60%)
Query: 20 NNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYXXXXXXXXXXXXXRNKQIQASIA 79
NNECPACR HCASRRSLRDD +DALIAAL+ +ID Y RNKQIQASIA
Sbjct: 172 NNECPACRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEMARNKQIQASIA 231
Query: 80 QTFQRQTEALGRKRT-PKSTSALRRS----HGRYRDTPLRGRRNYRMTELQGSDENDDAN 134
Q QRQ+EAL ++R+ K + L RS G R R +E D+NDD N
Sbjct: 232 QISQRQSEALVKRRSLGKEAAVLMRSPRIASGSRRRRNSRNMEQQNASEAHEDDDNDD-N 290
Query: 135 GDAGKDS-SSADERSTEVRPKRRKRWYGARFXXXXXXXXXXXXXXD--ENDSEVHRESMG 191
+ G+D SS+DER TEVR K+R++ +R + +ND+EV+R++ G
Sbjct: 291 NNRGRDKDSSSDERGTEVRQKKRRKRSTSRSTQHPSSSGANKNNGNCADNDTEVYRDTKG 350
Query: 192 ASVGLIGPSERLAWGKGGIRSHTRHGS-VSGSNGKNARNNRLSKLVDYLQS-LEEKDDQL 249
S GL+ E LAWG+GG RS+TRHG+ SG + K+ RN R++KLV+YL+S ++ +L
Sbjct: 351 ISPGLVWNPEILAWGRGGTRSNTRHGNNTSGGSSKSVRNARVNKLVEYLRSSVDGSSVEL 410
Query: 250 DMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKEL---H 306
D+H+ LVSLD + IP L QPYLCCRPTL V+ L ++VA Q L+ E+E+ + +
Sbjct: 411 DIHVKLVSLDTKCIPDLPQPYLCCRPTLLVKQLREFVALQIHLKTEEVELLVTRRRVGED 470
Query: 307 SKI-NLPSSSNSLMIDPCKDKLQVLNEQETLTGLQTQNLG-HG-FLLLAYQK 355
+ I NLP+ + + KD++ L + ETL+ L+ + H L++AY+K
Sbjct: 471 AAIENLPAVTPASAA-ASKDEMLSLEDNETLSRLKIDFISSHEQHLIIAYRK 521
>TAIR|locus:2825930 [details] [associations]
symbol:AT1G28327 "AT1G28327" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 IPI:IPI00534201 RefSeq:NP_174154.2
UniGene:At.51181 PRIDE:F4HWK6 EnsemblPlants:AT1G28327.1
GeneID:839728 KEGG:ath:AT1G28327 OMA:CEMYVAP Uniprot:F4HWK6
Length = 274
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 81/291 (27%), Positives = 139/291 (47%)
Query: 72 KQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGR--YRDTPLRGRRNYR--MTELQGS 127
KQ QAS QT +RQ + KR + R G+ +R P +G R R + + +G
Sbjct: 7 KQGQASYMQTLKRQAKVDSGKRMSTNFVIRRDPTGQCIFRPIPFKGMRKVRKHVDDDEGW 66
Query: 128 DENDDANGDAGKDSSSADERSTEVRPKRRKRWYGARFXXXXXXXXXXXXXXDEND-SEVH 186
G SSS D S P + R D++D S
Sbjct: 67 SGGSKKVKVRGLTSSSGDGDSLSY-PFENETTIRNREKDRLMLEIFGPESTDDSDESGTE 125
Query: 187 RESMGASV-GLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEK 245
E M ++ L+ L WGK G RS + G+ ++ N + + +
Sbjct: 126 EEFMETNLMSLVS----LQWGKRGKRSMRK-----GTWKRHILENHVGQH-------KNT 169
Query: 246 DDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQ-YVAHQTALQASEIEIYLVKE 304
D++D+ ++LVS+D IP LQ P + C+P ++++ LC+ YVA QA +IE+Y+VKE
Sbjct: 170 QDEMDIQVLLVSMDASVIPNLQNPQVSCKPNVTLKSLCEMYVAPYVEAQAEKIEMYVVKE 229
Query: 305 LHSKINLPSSSNSLMIDPCKDKLQVLNEQETLTGLQTQNLGHGFLLLAYQK 355
L +++ MIDP +D+++++N+++++ GL+ N +G++++ Y K
Sbjct: 230 LVAELT--------MIDPHRDRVEIVNKEDSVGGLRMYNFNNGYVIIGYMK 272
>RGD|1305491 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000151
"ubiquitin ligase complex" evidence=ISO;ISS] [GO:0000278 "mitotic
cell cycle" evidence=IEA;ISO] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA;ISO] [GO:0001739 "sex chromatin"
evidence=IEA;ISO] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISO;ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=IEA;ISO] [GO:0016574 "histone
ubiquitination" evidence=ISO] [GO:0016604 "nuclear body"
evidence=IEA;ISO] [GO:0031519 "PcG protein complex"
evidence=ISO;ISS] [GO:0035102 "PRC1 complex" evidence=ISO;ISS]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA;ISO]
[GO:0071339 "MLL1 complex" evidence=ISO;ISS] [GO:0071535 "RING-like
zinc finger domain binding" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 RGD:1305491 Prosite:PS00518
GO:GO:0005694 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 CTD:6045
OrthoDB:EOG4R7VB1 EMBL:BC098941 IPI:IPI00950204
RefSeq:NP_001020838.1 UniGene:Rn.19719 ProteinModelPortal:Q4KLY4
SMR:Q4KLY4 STRING:Q4KLY4 PhosphoSite:Q4KLY4
Ensembl:ENSRNOT00000065944 GeneID:304850 KEGG:rno:304850
UCSC:RGD:1305491 InParanoid:Q4KLY4 NextBio:653721
ArrayExpress:Q4KLY4 Genevestigator:Q4KLY4
GermOnline:ENSRNOG00000002454 Uniprot:Q4KLY4
Length = 308
Score = 189 (71.6 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKY 56
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP D+Y
Sbjct: 66 ECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY 120
Score = 45 (20.9 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
Identities = 18/75 (24%), Positives = 31/75 (41%)
Query: 220 SGSNGKNARNNRLSKLVD-YLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLS 278
S +G NN + +D + E + H L+ D+ Q Y+ +
Sbjct: 200 SDDSGLELDNNNAAVAIDPVMDGASEIELVFRPHPTLMEKDDSA----QTRYIKTSGNAT 255
Query: 279 VRHLCQYVAHQTALQ 293
V HL +Y+A + AL+
Sbjct: 256 VDHLSKYLAVRLALE 270
Score = 38 (18.4 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
Identities = 18/75 (24%), Positives = 28/75 (37%)
Query: 85 QTEALGRKRTPKSTSALRRS--HGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 142
Q L R + AL S G R +R + GS D NGD+ S+
Sbjct: 124 QERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAED--NGDSSHCSN 181
Query: 143 SADERSTEVRPKRRK 157
++ + E P ++
Sbjct: 182 ASTHSNQEAGPSNKR 196
>ZFIN|ZDB-GENE-030131-5243 [details] [associations]
symbol:rnf2 "ring finger protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033339 "pectoral fin development" evidence=IMP] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0016604 "nuclear body"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0000278
"mitotic cell cycle" evidence=ISS] [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5243 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0033339 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 EMBL:AY576996
EMBL:BC044472 EMBL:AF196346 IPI:IPI00499481 RefSeq:NP_571288.1
UniGene:Dr.31086 ProteinModelPortal:Q803I4 SMR:Q803I4 STRING:Q803I4
Ensembl:ENSDART00000017034 GeneID:327035 KEGG:dre:327035 CTD:6045
InParanoid:Q803I4 OrthoDB:EOG4R7VB1 NextBio:20809851 Bgee:Q803I4
Uniprot:Q803I4
Length = 336
Score = 190 (71.9 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 35/72 (48%), Positives = 42/72 (58%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYXXXXX 61
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP D+Y
Sbjct: 66 ECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQE 125
Query: 62 XXXXXXXXRNKQ 73
N Q
Sbjct: 126 RVLARISKHNNQ 137
Score = 56 (24.8 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 29/127 (22%), Positives = 53/127 (41%)
Query: 214 TRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCC 273
T+ SG + NA N + L + E + H L+ ++ Q Y+
Sbjct: 197 TKTSDDSGLDMDNATENGGGDIA--LDGVSEIELVFRPHPTLMEKED----AAQTRYIKT 250
Query: 274 RPTLSVRHLCQYVAHQTALQ-------ASEIEIYLVKELHSKINLPSSSNSLMIDPCKDK 326
+V HL +Y+A + AL+ AS I + E I +P++SN +
Sbjct: 251 SGNATVDHLSKYLAVRLALEEMRKNGEASPINVEAASEKQYTIYIPTASNQFTVLNGSFS 310
Query: 327 LQVLNEQ 333
L++++E+
Sbjct: 311 LELVSEK 317
>UNIPROTKB|E1BQF7 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0035102
"PRC1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0071339 "MLL1 complex"
evidence=IEA] [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP CTD:6045
EMBL:AADN02034211 IPI:IPI00572800 RefSeq:XP_422295.2
ProteinModelPortal:E1BQF7 Ensembl:ENSGALT00000007706 GeneID:424452
KEGG:gga:424452 NextBio:20826782 Uniprot:E1BQF7
Length = 336
Score = 190 (71.9 bits), Expect = 5.5e-15, Sum P(3) = 5.5e-15
Identities = 35/72 (48%), Positives = 42/72 (58%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYXXXXX 61
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP D+Y
Sbjct: 66 ECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQE 125
Query: 62 XXXXXXXXRNKQ 73
N Q
Sbjct: 126 RVLARISKHNNQ 137
Score = 47 (21.6 bits), Expect = 5.5e-15, Sum P(3) = 5.5e-15
Identities = 28/116 (24%), Positives = 49/116 (42%)
Query: 220 SGSNGKNARNNRLSKLVD-YLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLS 278
S +G NN + +D L E + H L+ D+ Q Y+ +
Sbjct: 200 SDDSGLELDNNNTAVAIDPVLDGASEIELVFRPHPTLMENDDSA----QTRYIKTSGNAT 255
Query: 279 VRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSN---SLMIDPCKDKLQVLN 331
V HL +Y+A + AL+ E+ K +++NL ++S ++ I + VLN
Sbjct: 256 VDHLSKYLAVRLALE--ELRS---KGESNQMNLDTASEKQYTIYIATANGQFTVLN 306
Score = 37 (18.1 bits), Expect = 5.5e-15, Sum P(3) = 5.5e-15
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 126 GSDENDDANGDAGKDSSSADERSTEVRPKRRK 157
GS D NGD+ S+++ + E P ++
Sbjct: 167 GSGAED--NGDSSHCSNASTHSNQEAGPSNKR 196
>UNIPROTKB|Q99496 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000278 "mitotic cell cycle" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0001739
"sex chromatin" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071339 "MLL1 complex"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031519 "PcG
protein complex" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IDA] [GO:0035102 "PRC1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0071535
"RING-like zinc finger domain binding" evidence=IPI] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 EMBL:CH471067 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009948 GO:GO:0016604 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278 CleanEx:HS_BAP1
GO:GO:0035518 GO:GO:0035102 PDB:2H0D PDB:3RPG PDBsum:2H0D
PDBsum:3RPG PDB:3GS2 PDBsum:3GS2 GO:GO:0001739 EMBL:AL109865
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1 EMBL:Y10571 EMBL:AF141327
EMBL:AK314793 EMBL:BC012583 IPI:IPI00026993 RefSeq:NP_009143.1
UniGene:Hs.591490 PDB:3H8H PDB:3IXS PDBsum:3H8H PDBsum:3IXS
ProteinModelPortal:Q99496 SMR:Q99496 DIP:DIP-40034N IntAct:Q99496
MINT:MINT-1420125 STRING:Q99496 PhosphoSite:Q99496 DMDM:62901044
PaxDb:Q99496 PRIDE:Q99496 DNASU:6045 Ensembl:ENST00000367510
Ensembl:ENST00000453650 GeneID:6045 KEGG:hsa:6045 UCSC:uc001grc.1
GeneCards:GC01P185014 HGNC:HGNC:10061 HPA:HPA026803 MIM:608985
neXtProt:NX_Q99496 PharmGKB:PA34426 InParanoid:Q99496
PhylomeDB:Q99496 EvolutionaryTrace:Q99496 GenomeRNAi:6045
NextBio:23553 ArrayExpress:Q99496 Bgee:Q99496 CleanEx:HS_RNF2
Genevestigator:Q99496 GermOnline:ENSG00000121481 Uniprot:Q99496
Length = 336
Score = 189 (71.6 bits), Expect = 6.0e-15, Sum P(3) = 6.0e-15
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKY 56
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP D+Y
Sbjct: 66 ECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY 120
Score = 47 (21.6 bits), Expect = 6.0e-15, Sum P(3) = 6.0e-15
Identities = 27/116 (23%), Positives = 49/116 (42%)
Query: 220 SGSNGKNARNNRLSKLVD-YLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLS 278
S +G NN + +D + E + H L+ D+ Q Y+ +
Sbjct: 200 SDDSGLELDNNNAAMAIDPVMDGASEIELVFRPHPTLMEKDDSA----QTRYIKTSGNAT 255
Query: 279 VRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSN---SLMIDPCKDKLQVLN 331
V HL +Y+A + AL+ E+ K +++NL ++S ++ I + VLN
Sbjct: 256 VDHLSKYLAVRLALE--ELRS---KGESNQMNLDTASEKQYTIYIATASGQFTVLN 306
Score = 38 (18.4 bits), Expect = 6.0e-15, Sum P(3) = 6.0e-15
Identities = 18/75 (24%), Positives = 28/75 (37%)
Query: 85 QTEALGRKRTPKSTSALRRS--HGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 142
Q L R + AL S G R +R + GS D NGD+ S+
Sbjct: 124 QERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAED--NGDSSHCSN 181
Query: 143 SADERSTEVRPKRRK 157
++ + E P ++
Sbjct: 182 ASTHSNQEAGPSNKR 196
>UNIPROTKB|Q5R9J5 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9601 "Pongo abelii" [GO:0000151 "ubiquitin ligase complex"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0031519 "PcG protein complex" evidence=ISS] [GO:0035102 "PRC1
complex" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005694 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0006351
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102 HOVERGEN:HBG079942
KO:K10695 CTD:6045 EMBL:CR859392 RefSeq:NP_001127433.1
UniGene:Pab.7792 ProteinModelPortal:Q5R9J5 SMR:Q5R9J5 PRIDE:Q5R9J5
GeneID:100174504 KEGG:pon:100174504 InParanoid:Q5R9J5
Uniprot:Q5R9J5
Length = 336
Score = 189 (71.6 bits), Expect = 6.0e-15, Sum P(3) = 6.0e-15
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKY 56
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP D+Y
Sbjct: 66 ECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY 120
Score = 47 (21.6 bits), Expect = 6.0e-15, Sum P(3) = 6.0e-15
Identities = 27/116 (23%), Positives = 49/116 (42%)
Query: 220 SGSNGKNARNNRLSKLVD-YLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLS 278
S +G NN + +D + E + H L+ D+ Q Y+ +
Sbjct: 200 SDDSGLEPDNNNAAMAIDPVMDGASEIELVFRPHPTLMEKDDSA----QTRYIKTSGNAT 255
Query: 279 VRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSN---SLMIDPCKDKLQVLN 331
V HL +Y+A + AL+ E+ K +++NL ++S ++ I + VLN
Sbjct: 256 VDHLSKYLAVRLALE--ELRS---KGESNQMNLDTASEKQYTIYIATASGQFTVLN 306
Score = 38 (18.4 bits), Expect = 6.0e-15, Sum P(3) = 6.0e-15
Identities = 18/75 (24%), Positives = 28/75 (37%)
Query: 85 QTEALGRKRTPKSTSALRRS--HGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 142
Q L R + AL S G R +R + GS D NGD+ S+
Sbjct: 124 QERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAED--NGDSSHCSN 181
Query: 143 SADERSTEVRPKRRK 157
++ + E P ++
Sbjct: 182 ASTHSNQEAGPSNKR 196
>UNIPROTKB|A6QLQ0 [details] [associations]
symbol:RNF2 "RNF2 protein" species:9913 "Bos taurus"
[GO:0071535 "RING-like zinc finger domain binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0035102 "PRC1 complex"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0009948
"anterior/posterior axis specification" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0000278
"mitotic cell cycle" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0000122
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0009948 GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907
GO:GO:0071339 GO:GO:0000278 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP
CTD:6045 OrthoDB:EOG4R7VB1 EMBL:DAAA02043606 EMBL:BC148044
IPI:IPI00867396 RefSeq:NP_001094673.1 UniGene:Bt.102990 SMR:A6QLQ0
STRING:A6QLQ0 Ensembl:ENSBTAT00000000025 GeneID:540090
KEGG:bta:540090 InParanoid:A6QLQ0 NextBio:20878411 Uniprot:A6QLQ0
Length = 336
Score = 189 (71.6 bits), Expect = 7.6e-15, Sum P(3) = 7.6e-15
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKY 56
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP D+Y
Sbjct: 66 ECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY 120
Score = 46 (21.3 bits), Expect = 7.6e-15, Sum P(3) = 7.6e-15
Identities = 27/116 (23%), Positives = 49/116 (42%)
Query: 220 SGSNGKNARNNRLSKLVD-YLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLS 278
S +G NN + +D + E + H L+ D+ Q Y+ +
Sbjct: 200 SDDSGLELDNNNATVAIDPVMDGASEIELVFRPHPTLMEKDDSA----QTRYIKTSGNAT 255
Query: 279 VRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSN---SLMIDPCKDKLQVLN 331
V HL +Y+A + AL+ E+ K +++NL ++S ++ I + VLN
Sbjct: 256 VDHLSKYLAVRLALE--ELRS---KGESNQMNLDTASEKQYTIYIATASGQFTVLN 306
Score = 38 (18.4 bits), Expect = 7.6e-15, Sum P(3) = 7.6e-15
Identities = 18/75 (24%), Positives = 28/75 (37%)
Query: 85 QTEALGRKRTPKSTSALRRS--HGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 142
Q L R + AL S G R +R + GS D NGD+ S+
Sbjct: 124 QERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAED--NGDSSHCSN 181
Query: 143 SADERSTEVRPKRRK 157
++ + E P ++
Sbjct: 182 ASTHSNQEAGPSNKR 196
>MGI|MGI:1101759 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0000151 "ubiquitin
ligase complex" evidence=ISO;IDA] [GO:0000278 "mitotic cell cycle"
evidence=IMP] [GO:0001702 "gastrulation with mouth forming second"
evidence=IMP] [GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=ISO] [GO:0009948 "anterior/posterior axis
specification" evidence=IMP] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISO] [GO:0071535 "RING-like
zinc finger domain binding" evidence=ISO] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101759
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0031519 GO:GO:0035102 GO:GO:0016574 PDB:2CKL
PDBsum:2CKL GO:GO:0001739 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1
EMBL:Y12880 EMBL:Y12783 EMBL:AK145767 EMBL:AK012358 EMBL:AK013124
EMBL:AK030319 EMBL:AK090066 EMBL:CT010297 EMBL:BC020122
IPI:IPI00133880 RefSeq:NP_035407.1 UniGene:Mm.474038
ProteinModelPortal:Q9CQJ4 SMR:Q9CQJ4 IntAct:Q9CQJ4
MINT:MINT-1341250 STRING:Q9CQJ4 PhosphoSite:Q9CQJ4 PaxDb:Q9CQJ4
PRIDE:Q9CQJ4 Ensembl:ENSMUST00000076110 GeneID:19821 KEGG:mmu:19821
UCSC:uc007cyx.1 InParanoid:Q9CQJ4 EvolutionaryTrace:Q9CQJ4
NextBio:297285 Bgee:Q9CQJ4 CleanEx:MM_RNF2 Genevestigator:Q9CQJ4
GermOnline:ENSMUSG00000026484 Uniprot:Q9CQJ4
Length = 336
Score = 189 (71.6 bits), Expect = 7.6e-15, Sum P(3) = 7.6e-15
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKY 56
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP D+Y
Sbjct: 66 ECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY 120
Score = 46 (21.3 bits), Expect = 7.6e-15, Sum P(3) = 7.6e-15
Identities = 27/116 (23%), Positives = 49/116 (42%)
Query: 220 SGSNGKNARNNRLSKLVD-YLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLS 278
S +G NN + +D + E + H L+ D+ Q Y+ +
Sbjct: 200 SDDSGLELDNNNAAVAIDPVMDGASEIELVFRPHPTLMEKDDSA----QTRYIKTSGNAT 255
Query: 279 VRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSN---SLMIDPCKDKLQVLN 331
V HL +Y+A + AL+ E+ K +++NL ++S ++ I + VLN
Sbjct: 256 VDHLSKYLAVRLALE--ELRS---KGESNQMNLDTASEKQYTIYIATASGQFTVLN 306
Score = 38 (18.4 bits), Expect = 7.6e-15, Sum P(3) = 7.6e-15
Identities = 18/75 (24%), Positives = 28/75 (37%)
Query: 85 QTEALGRKRTPKSTSALRRS--HGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 142
Q L R + AL S G R +R + GS D NGD+ S+
Sbjct: 124 QERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAED--NGDSSHCSN 181
Query: 143 SADERSTEVRPKRRK 157
++ + E P ++
Sbjct: 182 ASTHSNQEAGPSNKR 196
>UNIPROTKB|F1S3N6 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518
"histone H2A monoubiquitination" evidence=IEA] [GO:0035102 "PRC1
complex" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0009948 "anterior/posterior axis specification" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP EMBL:CU915492
RefSeq:XP_003130427.1 Ensembl:ENSSSCT00000016959 GeneID:100517846
KEGG:ssc:100517846 Uniprot:F1S3N6
Length = 336
Score = 189 (71.6 bits), Expect = 9.6e-15, Sum P(3) = 9.6e-15
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKY 56
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP D+Y
Sbjct: 66 ECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY 120
Score = 46 (21.3 bits), Expect = 9.6e-15, Sum P(3) = 9.6e-15
Identities = 27/116 (23%), Positives = 49/116 (42%)
Query: 220 SGSNGKNARNNRLSKLVD-YLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLS 278
S +G NN + +D + E + H L+ D+ Q Y+ +
Sbjct: 200 SDDSGLELDNNNAAVAIDPVMDGASEIELVFRPHPTLMEKDDSA----QTRYIKTSGNAT 255
Query: 279 VRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSN---SLMIDPCKDKLQVLN 331
V HL +Y+A + AL+ E+ K +++NL ++S ++ I + VLN
Sbjct: 256 VDHLSKYLAVRLALE--ELRS---KGESNQMNLDTASEKQYTIYIATASGQFTVLN 306
Score = 37 (18.1 bits), Expect = 9.6e-15, Sum P(3) = 9.6e-15
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 126 GSDENDDANGDAGKDSSSADERSTEVRPKRRK 157
GS D NGD+ S+++ + E P ++
Sbjct: 167 GSGAED--NGDSSHCSNASTHSNQEAGPSNKR 196
>UNIPROTKB|E2RFW1 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071535 "RING-like zinc finger domain
binding" evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA]
[GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001739 "sex
chromatin" evidence=IEA] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 GO:GO:0001702
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:MELYFAP EMBL:AAEX03005159
Ensembl:ENSCAFT00000021407 Uniprot:E2RFW1
Length = 337
Score = 189 (71.6 bits), Expect = 9.9e-15, Sum P(3) = 9.9e-15
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKY 56
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP D+Y
Sbjct: 66 ECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY 120
Score = 46 (21.3 bits), Expect = 9.9e-15, Sum P(3) = 9.9e-15
Identities = 27/116 (23%), Positives = 49/116 (42%)
Query: 220 SGSNGKNARNNRLSKLVD-YLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLS 278
S +G NN + +D + E + H L+ D+ Q Y+ +
Sbjct: 201 SDDSGLELDNNNATVAIDPVMDGASEIELVFRPHPTLMEKDDSA----QTRYIKTSGNAT 256
Query: 279 VRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSN---SLMIDPCKDKLQVLN 331
V HL +Y+A + AL+ E+ K +++NL ++S ++ I + VLN
Sbjct: 257 VDHLSKYLAVRLALE--ELRS---KGESNQMNLDTASEKQYTIYIATASGQFTVLN 307
Score = 37 (18.1 bits), Expect = 9.9e-15, Sum P(3) = 9.9e-15
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 126 GSDENDDANGDAGKDSSSADERSTEVRPKRRK 157
GS D NGD+ S+++ + E P ++
Sbjct: 168 GSGAED--NGDSSHCSNASTHSNQEAGPSNKR 197
>UNIPROTKB|Q7ZWM8 [details] [associations]
symbol:rnf2-b "E3 ubiquitin-protein ligase RING2-B"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:BC046935 UniGene:Xl.76096
ProteinModelPortal:Q7ZWM8 SMR:Q7ZWM8 Xenbase:XB-GENE-6493980
Uniprot:Q7ZWM8
Length = 343
Score = 189 (71.6 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKY 56
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP D+Y
Sbjct: 62 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY 116
Score = 37 (18.1 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 267 QQPYLCCRPTLSVRHLCQYVAHQTALQ 293
Q Y+ +V HL +Y+A + AL+
Sbjct: 249 QTRYVKTTANATVDHLSKYLALRIALE 275
>UNIPROTKB|Q66J69 [details] [associations]
symbol:rnf2-a "E3 ubiquitin-protein ligase RING2-A"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 KO:K10695 EMBL:BC081039 RefSeq:NP_001087647.1
UniGene:Xl.6549 ProteinModelPortal:Q66J69 SMR:Q66J69 GeneID:447471
KEGG:xla:447471 CTD:447471 Xenbase:XB-GENE-6253865 Uniprot:Q66J69
Length = 344
Score = 189 (71.6 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKY 56
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP D+Y
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY 117
Score = 37 (18.1 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 267 QQPYLCCRPTLSVRHLCQYVAHQTALQ 293
Q Y+ +V HL +Y+A + AL+
Sbjct: 250 QTRYVKTTANATVDHLSKYLALRIALE 276
>UNIPROTKB|F1MUV0 [details] [associations]
symbol:RING1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048593 "camera-type eye morphogenesis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:QSASKTW EMBL:DAAA02054894
EMBL:DAAA02054895 IPI:IPI00718372 Ensembl:ENSBTAT00000054269
ArrayExpress:F1MUV0 Uniprot:F1MUV0
Length = 382
Score = 191 (72.3 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 46/141 (32%), Positives = 70/141 (49%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYXXXXX 61
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP ++Y
Sbjct: 38 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 97
Query: 62 XXXXXXXXRNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRM 121
+ Q QA ++ + + E L + ++ R G + T + G
Sbjct: 98 RVLIRLSRLHNQ-QA-LSSSIE---EGLRMQAMHRAQRVRRPMPGSDQTTTMSGGEG--- 149
Query: 122 TELQGSDENDDANGDAGKDSS 142
+G + +D + D+ DS+
Sbjct: 150 EPGEGEGDGEDVSSDSAPDSA 170
>UNIPROTKB|Q5TJF3 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9615 "Canis lupus familiaris" [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0048593 "camera-type
eye morphogenesis" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0035518 "histone
H2A monoubiquitination" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AJ630366 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 RefSeq:NP_001041593.1 UniGene:Cfa.40924
ProteinModelPortal:Q5TJF3 SMR:Q5TJF3 STRING:Q5TJF3
Ensembl:ENSCAFT00000001442 Ensembl:ENSCAFT00000044064 GeneID:607905
KEGG:cfa:607905 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 InParanoid:Q5TJF3 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 NextBio:20893594 Uniprot:Q5TJF3
Length = 406
Score = 191 (72.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 46/141 (32%), Positives = 70/141 (49%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYXXXXX 61
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP ++Y
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 62 XXXXXXXXRNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRM 121
+ Q QA ++ + + E L + ++ R G + T + G
Sbjct: 123 RVLIRLSRLHNQ-QA-LSSSIE---EGLRMQAMHRAQRVRRPMPGSDQTTTMSGGEG--- 174
Query: 122 TELQGSDENDDANGDAGKDSS 142
+G + +D + D+ DS+
Sbjct: 175 EPGEGEGDGEDVSSDSAPDSA 195
>UNIPROTKB|A5D9P0 [details] [associations]
symbol:RING1 "Ring finger protein 1" species:9823 "Sus
scrofa" [GO:0048593 "camera-type eye morphogenesis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:CT737383 EMBL:BX640585 RefSeq:NP_001177164.1 UniGene:Ssc.5967
ProteinModelPortal:A5D9P0 SMR:A5D9P0 STRING:A5D9P0
Ensembl:ENSSSCT00000001648 GeneID:100153162 KEGG:ssc:100153162
ArrayExpress:A5D9P0 Uniprot:A5D9P0
Length = 406
Score = 191 (72.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 46/141 (32%), Positives = 70/141 (49%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYXXXXX 61
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP ++Y
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 62 XXXXXXXXRNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRM 121
+ Q QA ++ + + E L + ++ R G + T + G
Sbjct: 123 RVLIRLSRLHNQ-QA-LSSSIE---EGLRMQAMHRAQRVRRPMPGSDQTTTMSGGEG--- 174
Query: 122 TELQGSDENDDANGDAGKDSS 142
+G + +D + D+ DS+
Sbjct: 175 EPGEGEGDGEDVSSDSAPDSA 195
>UNIPROTKB|A1YER5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9595 "Gorilla gorilla gorilla" [GO:0031519 "PcG protein
complex" evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:DQ976446 ProteinModelPortal:A1YER5
SMR:A1YER5 PRIDE:A1YER5 Uniprot:A1YER5
Length = 377
Score = 190 (71.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 46/141 (32%), Positives = 70/141 (49%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYXXXXX 61
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP ++Y
Sbjct: 34 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 93
Query: 62 XXXXXXXXRNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRM 121
+ Q QA ++ + + E L + ++ R G + T + G
Sbjct: 94 RVLIRLSRLHNQ-QA-LSSSIE---EGLRMQAMHRAQRVRRPIPGSDQTTTMSGGEG--- 145
Query: 122 TELQGSDENDDANGDAGKDSS 142
+G + +D + D+ DS+
Sbjct: 146 DPGEGEGDGEDVSSDSAPDSA 166
>UNIPROTKB|A1YFY1 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9597 "Pan paniscus" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:DQ977176 ProteinModelPortal:A1YFY1
SMR:A1YFY1 Uniprot:A1YFY1
Length = 377
Score = 190 (71.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 46/141 (32%), Positives = 70/141 (49%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYXXXXX 61
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP ++Y
Sbjct: 34 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 93
Query: 62 XXXXXXXXRNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRM 121
+ Q QA ++ + + E L + ++ R G + T + G
Sbjct: 94 RVLIRLSRLHNQ-QA-LSSSIE---EGLRMQAMHRAQRVRRPIPGSDQTTTMSGGEG--- 145
Query: 122 TELQGSDENDDANGDAGKDSS 142
+G + +D + D+ DS+
Sbjct: 146 EPGEGEGDGEDVSSDSAPDSA 166
>UNIPROTKB|A2T6X5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9598 "Pan troglodytes" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
CTD:6015 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 EMBL:DQ977325 RefSeq:NP_001074951.1
UniGene:Ptr.3708 ProteinModelPortal:A2T6X5 SMR:A2T6X5 STRING:A2T6X5
Ensembl:ENSPTRT00000065372 GeneID:462604 KEGG:ptr:462604
InParanoid:A2T6X5 NextBio:20841844 Uniprot:A2T6X5
Length = 377
Score = 190 (71.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 46/141 (32%), Positives = 70/141 (49%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYXXXXX 61
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP ++Y
Sbjct: 34 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 93
Query: 62 XXXXXXXXRNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRM 121
+ Q QA ++ + + E L + ++ R G + T + G
Sbjct: 94 RVLIRLSRLHNQ-QA-LSSSIE---EGLRMQAMHRAQRVRRPIPGSDQTTTMSGGEG--- 145
Query: 122 TELQGSDENDDANGDAGKDSS 142
+G + +D + D+ DS+
Sbjct: 146 EPGEGEGDGEDVSSDSAPDSA 166
>UNIPROTKB|Q8WMN5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9544 "Macaca mulatta" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102 CTD:6015
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OrthoDB:EOG4SXND4 EMBL:AJ421778 RefSeq:NP_001108431.1
UniGene:Mmu.17368 ProteinModelPortal:Q8WMN5 SMR:Q8WMN5
STRING:Q8WMN5 GeneID:718137 KEGG:mcc:718137 InParanoid:Q8WMN5
NextBio:19978408 Uniprot:Q8WMN5
Length = 377
Score = 190 (71.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 46/141 (32%), Positives = 70/141 (49%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYXXXXX 61
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP ++Y
Sbjct: 34 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 93
Query: 62 XXXXXXXXRNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRM 121
+ Q QA ++ + + E L + ++ R G + T + G
Sbjct: 94 RVLIRLSRLHNQ-QA-LSSSIE---EGLRMQAMHRAQRVRRPIPGSDQTTTMSGGEG--- 145
Query: 122 TELQGSDENDDANGDAGKDSS 142
+G + +D + D+ DS+
Sbjct: 146 EPGEGEGDGEDVSSDSAPDSA 166
>UNIPROTKB|Q06587 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0048593 "camera-type eye
morphogenesis" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0031519 "PcG protein complex" evidence=IDA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IDA]
[GO:0035102 "PRC1 complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AL031228 GO:GO:0035518 GO:GO:0035102
EMBL:AL645940 EMBL:AL844527 EMBL:CR759733 EMBL:CR759786
EMBL:AL713971 EMBL:CR847841 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 EMBL:Z14000 EMBL:BT007352 EMBL:AK289355
EMBL:CR547129 EMBL:BC002922 EMBL:BC051866 IPI:IPI00455876
IPI:IPI00641330 PIR:A47380 RefSeq:NP_002922.2 UniGene:Hs.631989
ProteinModelPortal:Q06587 SMR:Q06587 DIP:DIP-42043N IntAct:Q06587
MINT:MINT-1327105 STRING:Q06587 PhosphoSite:Q06587 DMDM:90110053
PaxDb:Q06587 PeptideAtlas:Q06587 PRIDE:Q06587 DNASU:6015
Ensembl:ENST00000374656 Ensembl:ENST00000383212
Ensembl:ENST00000415941 Ensembl:ENST00000427374
Ensembl:ENST00000430233 Ensembl:ENST00000436128 GeneID:6015
KEGG:hsa:6015 UCSC:uc003odk.3 GeneCards:GC06P033177 HGNC:HGNC:10018
HPA:HPA008701 MIM:602045 neXtProt:NX_Q06587 PharmGKB:PA34393
InParanoid:Q06587 GenomeRNAi:6015 NextBio:23467 ArrayExpress:Q06587
Bgee:Q06587 CleanEx:HS_RING1 Genevestigator:Q06587
GermOnline:ENSG00000204227 Uniprot:Q06587
Length = 406
Score = 190 (71.9 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 46/141 (32%), Positives = 70/141 (49%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYXXXXX 61
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP ++Y
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 62 XXXXXXXXRNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRM 121
+ Q QA ++ + + E L + ++ R G + T + G
Sbjct: 123 RVLIRLSRLHNQ-QA-LSSSIE---EGLRMQAMHRAQRVRRPIPGSDQTTTMSGGEG--- 174
Query: 122 TELQGSDENDDANGDAGKDSS 142
+G + +D + D+ DS+
Sbjct: 175 EPGEGEGDGEDVSSDSAPDSA 195
>RGD|3576 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA;ISO]
[GO:0001739 "sex chromatin" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0016574 "histone ubiquitination" evidence=ISO]
[GO:0016604 "nuclear body" evidence=ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO;ISS]
[GO:0035102 "PRC1 complex" evidence=ISO;ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0048593 "camera-type eye morphogenesis" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Pfam:PF00097 RGD:3576 Prosite:PS00518 GO:GO:0005737 GO:GO:0045892
GO:GO:0009952 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907 GO:GO:0035518
GO:GO:0035102 EMBL:BX883042 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917 HOVERGEN:HBG079942
KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4 EMBL:BC098635 EMBL:X95474
IPI:IPI00417840 IPI:IPI00742451 RefSeq:NP_997714.2 UniGene:Rn.116589
ProteinModelPortal:Q6MGB6 SMR:Q6MGB6 STRING:Q6MGB6
Ensembl:ENSRNOT00000000543 GeneID:309626 KEGG:rno:309626
UCSC:RGD:3576 InParanoid:Q6MGB6 NextBio:661076 Genevestigator:Q6MGB6
GermOnline:ENSRNOG00000000467 Uniprot:Q6MGB6
Length = 406
Score = 190 (71.9 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 46/141 (32%), Positives = 70/141 (49%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYXXXXX 61
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP ++Y
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 62 XXXXXXXXRNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRM 121
+ Q QA ++ + + E L + ++ R G + T + G
Sbjct: 123 RVLIRLSRLHNQ-QA-LSSSIE---EGLRMQAMHRAQRVRRPMPGSDQTTTMSGGEG--- 174
Query: 122 TELQGSDENDDANGDAGKDSS 142
+G + +D + D+ DS+
Sbjct: 175 EPGEGEGDGEDISSDSAPDSA 195
>MGI|MGI:1101770 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048593 "camera-type eye morphogenesis"
evidence=IGI] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101770 Pfam:PF00097
Prosite:PS00518 GO:GO:0005737 GO:GO:0045892 GO:GO:0009952
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
EMBL:AF100956 GO:GO:0035518 GO:GO:0031519 GO:GO:0035102
GO:GO:0016574 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:Y12881 EMBL:AK154962 EMBL:AK155509 EMBL:CT010219 EMBL:BC009070
EMBL:BC082771 IPI:IPI00344616 IPI:IPI00742283 IPI:IPI00742392
RefSeq:NP_033092.3 UniGene:Mm.20343 ProteinModelPortal:O35730
SMR:O35730 IntAct:O35730 MINT:MINT-158295 STRING:O35730
PhosphoSite:O35730 PaxDb:O35730 PRIDE:O35730
Ensembl:ENSMUST00000025183 GeneID:19763 KEGG:mmu:19763
UCSC:uc008cas.2 InParanoid:O35730 NextBio:297212 Bgee:O35730
CleanEx:MM_RING1 Genevestigator:O35730
GermOnline:ENSMUSG00000024325 Uniprot:O35730
Length = 406
Score = 189 (71.6 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 59/163 (36%), Positives = 81/163 (49%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYXXXXX 61
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP ++Y
Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQD 122
Query: 62 XXXXXXXXRNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRM 121
+ Q QA ++ + + E L + A+ R+ R R P+ G +
Sbjct: 123 RVLIRLSRLHNQ-QA-LSSSIE---EGLRMQ-------AMHRAQ-RVR-RPMPGS-DQTA 167
Query: 122 TELQGSDENDDANGDAGKD--SSSADERSTEVRPKRRKRWYGA 162
T G E + GD G+D S SA + + PKR R GA
Sbjct: 168 TMSGGEGEPGEGEGD-GEDVSSDSAPDSAPGPAPKR-PRGAGA 208
>FB|FBgn0003330 [details] [associations]
symbol:Sce "Sex combs extra" species:7227 "Drosophila
melanogaster" [GO:0045498 "sex comb development" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IDA]
[GO:0006342 "chromatin silencing" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IMP]
[GO:0008278 "cohesin complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0030713 "ovarian follicle cell stalk
formation" evidence=IMP] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0035102 "PRC1
complex" evidence=TAS] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IMP] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 EMBL:AE014297
GO:GO:0007126 GO:GO:0005730 GO:GO:0022008 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006342 InterPro:IPR017907 GO:GO:0030713
GO:GO:0045498 GO:GO:0035518 GO:GO:0035102 GO:GO:0030708
GO:GO:0008278 GO:GO:0007062 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 KO:K10695 EMBL:AJ001514 EMBL:AY058535
RefSeq:NP_477509.1 UniGene:Dm.4170 ProteinModelPortal:Q9VB08
SMR:Q9VB08 DIP:DIP-21764N IntAct:Q9VB08 MINT:MINT-860974
STRING:Q9VB08 PaxDb:Q9VB08 PRIDE:Q9VB08 EnsemblMetazoa:FBtr0085245
GeneID:43327 KEGG:dme:Dmel_CG5595 CTD:43327 FlyBase:FBgn0003330
InParanoid:Q9VB08 OMA:MELYFAP OrthoDB:EOG489332 PhylomeDB:Q9VB08
GenomeRNAi:43327 NextBio:833362 Bgee:Q9VB08 GermOnline:CG5595
Uniprot:Q9VB08
Length = 435
Score = 179 (68.1 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 31/55 (56%), Positives = 39/55 (70%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKY 56
ECLHRFC +CI A+R GN ECP CR S+RSLR D N+D LI+ +YP ++Y
Sbjct: 61 ECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSREEY 115
>UNIPROTKB|Q3KNV8 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 EMBL:CH471131 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 CTD:10336 KO:K11488 EMBL:AJ001019 EMBL:BC107061
IPI:IPI00007279 IPI:IPI00827991 RefSeq:NP_006306.2
UniGene:Hs.144309 UniGene:Hs.731755 ProteinModelPortal:Q3KNV8
SMR:Q3KNV8 IntAct:Q3KNV8 STRING:Q3KNV8 PhosphoSite:Q3KNV8
DMDM:121942537 PRIDE:Q3KNV8 Ensembl:ENST00000362003
Ensembl:ENST00000470161 Ensembl:ENST00000505655 GeneID:10336
KEGG:hsa:10336 UCSC:uc003gbe.3 GeneCards:GC04P000691
HGNC:HGNC:10066 HPA:HPA018487 neXtProt:NX_Q3KNV8 PharmGKB:PA34433
InParanoid:Q3KNV8 OMA:THLKKFI OrthoDB:EOG49ZXPZ ChiTaRS:PCGF3
GenomeRNAi:10336 NextBio:39203 ArrayExpress:Q3KNV8 Bgee:Q3KNV8
CleanEx:HS_PCGF3 Genevestigator:Q3KNV8 Uniprot:Q3KNV8
Length = 242
Score = 88 (36.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACR 27
ECLH FCR C+ K + NN CP CR
Sbjct: 32 ECLHTFCRSCLVKYLE-ENNTCPTCR 56
Score = 69 (29.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 207 KGGIRSHTRHGSVSG--SNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIP 264
K + SH R+G S+ K A + + DY +S D+Q+ + + + ++
Sbjct: 116 KQHLDSH-RNGETKADDSSNKEAAEEKPEEDNDYHRS----DEQVS---ICLECNSSKLR 167
Query: 265 GLQQPYLCCRPTLSVRHLCQYVAHQTALQA-SEIEIYLVKELHSK 308
GL++ ++ C +V HL +++A + L + +E++I +E+ K
Sbjct: 168 GLKRKWIRCSAQATVLHLKKFIAKKLNLSSFNELDILCNEEILGK 212
>UNIPROTKB|Q2KJ29 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9913 "Bos taurus" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
HOVERGEN:HBG052826 eggNOG:NOG277991 HOGENOM:HOG000231946
EMBL:BC105550 IPI:IPI00718391 RefSeq:NP_001040032.1
UniGene:Bt.13972 ProteinModelPortal:Q2KJ29 SMR:Q2KJ29 PRIDE:Q2KJ29
GeneID:615967 KEGG:bta:615967 CTD:10336 InParanoid:Q2KJ29 KO:K11488
NextBio:20899886 Uniprot:Q2KJ29
Length = 242
Score = 88 (36.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACR 27
ECLH FCR C+ K + NN CP CR
Sbjct: 32 ECLHTFCRSCLVKYLE-ENNTCPTCR 56
Score = 66 (28.3 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 22/97 (22%), Positives = 49/97 (50%)
Query: 215 RHGSVSG--SNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLC 272
R+G S+ K A + + DY +S D+Q+ + + + ++ GL++ ++
Sbjct: 123 RNGETKADDSSNKEAAEEKQEEDGDYHRS----DEQVS---ICLECNSSKLRGLKRKWIR 175
Query: 273 CRPTLSVRHLCQYVAHQTALQA-SEIEIYLVKELHSK 308
C +V HL +++A + L + +E++I +E+ K
Sbjct: 176 CSAQATVLHLKKFIAKKLNLSSFNELDILCNEEILGK 212
>UNIPROTKB|F1NLA3 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031519
"PcG protein complex" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 OMA:THLKKFI EMBL:AADN02065914
IPI:IPI00588017 Ensembl:ENSGALT00000024747 Uniprot:F1NLA3
Length = 245
Score = 88 (36.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACR 27
ECLH FCR C+ K + NN CP CR
Sbjct: 35 ECLHTFCRSCLVKYLE-ENNTCPTCR 59
Score = 65 (27.9 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 21/103 (20%), Positives = 47/103 (45%)
Query: 207 KGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGL 266
K + SH R+G N + + D D+Q+ + + + ++ GL
Sbjct: 119 KQHLDSH-RNGETKTDENSNKETSEEKQEED--NDYHRSDEQVS---ICLECNSSKLRGL 172
Query: 267 QQPYLCCRPTLSVRHLCQYVAHQTALQA-SEIEIYLVKELHSK 308
++ ++ C +V HL +++A + L + +E++I +E+ K
Sbjct: 173 KRKWIRCSAQATVLHLKKFIAKKLNLSSFNELDILCNEEILGK 215
>UNIPROTKB|F1PGG1 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AAEX03002650
Ensembl:ENSCAFT00000026535 Uniprot:F1PGG1
Length = 286
Score = 88 (36.0 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACR 27
ECLH FCR C+ K + NN CP CR
Sbjct: 76 ECLHTFCRSCLVKYLE-ENNTCPTCR 100
Score = 66 (28.3 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 22/97 (22%), Positives = 49/97 (50%)
Query: 215 RHGSVSG--SNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLC 272
R+G S+ K A + + DY +S D+Q+ + + + ++ GL++ ++
Sbjct: 167 RNGETKADDSSNKEAAEEKQEEDNDYHRS----DEQVS---ICLECNSSKLRGLKRKWIR 219
Query: 273 CRPTLSVRHLCQYVAHQTALQA-SEIEIYLVKELHSK 308
C +V HL +++A + L + +E++I +E+ K
Sbjct: 220 CSAQATVLHLKKFIAKKLNLSSFNELDILCNEEILGK 256
>UNIPROTKB|I3LAF0 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031519 "PcG protein complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 OMA:THLKKFI EMBL:FP102972
Ensembl:ENSSSCT00000030851 Uniprot:I3LAF0
Length = 203
Score = 88 (36.0 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACR 27
ECLH FCR C+ K + NN CP CR
Sbjct: 32 ECLHTFCRSCLVKYLE-ENNTCPTCR 56
Score = 60 (26.2 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 21/90 (23%), Positives = 44/90 (48%)
Query: 207 KGGIRSHTRHGSVSG--SNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIP 264
K + SH R+G S+ K A + + DY +S D+Q+ + + + ++
Sbjct: 116 KQHLDSH-RNGETKAEDSSNKEAAEEKQEEDGDYHRS----DEQVS---ICLECNSSKLR 167
Query: 265 GLQQPYLCCRPTLSVRHLCQYVAHQTALQA 294
GL++ ++ C +V HL +++A + L +
Sbjct: 168 GLKRKWIRCSAQATVLHLKKFIAKKLNLSS 197
>MGI|MGI:1916837 [details] [associations]
symbol:Pcgf3 "polycomb group ring finger 3" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1916837
Pfam:PF00097 Prosite:PS00518 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826 eggNOG:NOG277991
HOGENOM:HOG000231946 CTD:10336 KO:K11488 OMA:THLKKFI
OrthoDB:EOG49ZXPZ EMBL:AK033609 EMBL:AK089091 EMBL:BC049266
IPI:IPI00225141 IPI:IPI00471142 RefSeq:NP_766304.2
UniGene:Mm.261218 UniGene:Mm.486543 ProteinModelPortal:Q8BTQ0
SMR:Q8BTQ0 IntAct:Q8BTQ0 PhosphoSite:Q8BTQ0 PRIDE:Q8BTQ0
Ensembl:ENSMUST00000046975 Ensembl:ENSMUST00000112597 GeneID:69587
KEGG:mmu:69587 UCSC:uc008yod.1 UCSC:uc008yoe.1 InParanoid:Q8BTQ0
NextBio:329856 Bgee:Q8BTQ0 CleanEx:MM_PCGF3 Genevestigator:Q8BTQ0
Uniprot:Q8BTQ0
Length = 241
Score = 88 (36.0 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACR 27
ECLH FCR C+ K + NN CP CR
Sbjct: 32 ECLHTFCRSCLVKYLE-ENNTCPTCR 56
Score = 63 (27.2 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 23/105 (21%), Positives = 50/105 (47%)
Query: 207 KGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLD--EQRIP 264
KG S +H + NG+ ++ +K + E+ D V + L+ ++
Sbjct: 109 KGEACSAKQH--LDPRNGETKADDNSNKETAEEKQEEDNDYHRSDEQVSICLECNSSKLR 166
Query: 265 GLQQPYLCCRPTLSVRHLCQYVAHQTALQA-SEIEIYLVKELHSK 308
GL++ ++ C +V HL +++A + L + +E++I +E+ K
Sbjct: 167 GLKRKWIRCSAQATVLHLKKFIAKKLNLSSFNELDILCNEEILGK 211
>UNIPROTKB|E1BAF7 [details] [associations]
symbol:E1BAF7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031519 "PcG protein complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 IPI:IPI00718391 OMA:THLKKFI
EMBL:DAAA02018518 EMBL:DAAA02018519 EMBL:DAAA02018520
EMBL:DAAA02018521 EMBL:DAAA02018522 Ensembl:ENSBTAT00000018621
Uniprot:E1BAF7
Length = 242
Score = 88 (36.0 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 2 ECLHRFCRECIDKAMRLGNNECPACR 27
ECLH FCR C+ K + NN CP CR
Sbjct: 32 ECLHTFCRSCLVKYLE-ENNTCPTCR 56
Score = 62 (26.9 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 19/83 (22%), Positives = 43/83 (51%)
Query: 227 ARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYV 286
A ++R SK DY Q ++ + + + ++ GL++ ++ C +V HL +++
Sbjct: 131 ASHDRESKN-DYKQKNGDRRRSGSAVSICLECNSSKLRGLKRKWIRCSAQATVLHLKKFI 189
Query: 287 AHQTALQA-SEIEIYLVKELHSK 308
A + L + +E++I +E+ K
Sbjct: 190 AKKLNLSSFNELDILCNEEILGK 212
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 359 332 0.00090 116 3 11 22 0.41 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 607 (65 KB)
Total size of DFA: 225 KB (2124 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.49u 0.12s 30.61t Elapsed: 00:00:01
Total cpu time: 30.50u 0.12s 30.62t Elapsed: 00:00:01
Start: Sat May 11 02:54:49 2013 End: Sat May 11 02:54:50 2013